BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041822
(500 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|147789025|emb|CAN75780.1| hypothetical protein VITISV_012424 [Vitis vinifera]
Length = 515
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/502 (67%), Positives = 411/502 (81%), Gaps = 13/502 (2%)
Query: 2 LLAKRLKRSDKFPGISDRLALL----FSTTTQS-------SEIERITRIINDHPFPDQPL 50
+L R KRS++ I +L L F ++ QS SEI+R+TRIINDHPFPD PL
Sbjct: 1 MLLLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPL 60
Query: 51 HPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
H TL+QH+P+ LS+T VENVLGRLFAAHSNG KA EFFKF+LQH F P+ DAFEKTL
Sbjct: 61 HSTLIQHVPKHL-LSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTL 119
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
HIL RMRYFD+AWELM +Q+THPSLLTLKSMSIMLSRI+KFQSYE+TLEAF RME+ +F
Sbjct: 120 HILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVF 179
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA 230
G R+FG+ EFNVLL+AFCTQ++MKEARSVF K+ SRF+PN KTMNILLLGFKESGDVTA
Sbjct: 180 FG-REFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTA 238
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+E+FYHEM+ RGF+P+ VTYNIRID YCKKGCFGD +RL EEME+ C P+L+TITTLIH
Sbjct: 239 VELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIH 298
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
GAG+ +NI +AR+LF+E+ RNL+PDIG YNA +SSLIR R++ +A+ LMDEMEE+ IGH
Sbjct: 299 GAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGH 358
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D++TYHTMF GLM+S+G+EGV +LY +MI FVPKTRT+VMLMK+FC N ++DL L+LW
Sbjct: 359 DSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLW 418
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
GYLIDRG+CPHGHALDLLVTGLCS G+ +EA EC+KQ L R R +SE +RML+RYLV+A
Sbjct: 419 GYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEA 478
Query: 471 NANEKLEDLDRMIKNLQAVLPP 492
E L LD+MIK L VLPP
Sbjct: 479 GEGEMLWKLDQMIKKLHTVLPP 500
>gi|225460540|ref|XP_002272860.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61360
[Vitis vinifera]
gi|296081020|emb|CBI18524.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 340/502 (67%), Positives = 411/502 (81%), Gaps = 13/502 (2%)
Query: 2 LLAKRLKRSDKFPGISDRLALL----FSTTTQS-------SEIERITRIINDHPFPDQPL 50
+L R KRS++ I +L L F ++ QS SEI+R+TRIINDHPFPD PL
Sbjct: 1 MLLLRTKRSNQPYQIPQKLTLFLNIAFKSSGQSHPSLEIKSEIDRVTRIINDHPFPDHPL 60
Query: 51 HPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
H TL+QH+P+ LS+T VENVLGRLFAAHSNG KA EFFKF+LQH F P+ DAFEKTL
Sbjct: 61 HSTLIQHVPKHL-LSNTFVENVLGRLFAAHSNGFKAFEFFKFSLQHSEFCPSSDAFEKTL 119
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
HIL RMRYFD+AWELM +Q+THPSLLTLKSMSIMLSRI+KFQSYE+TLEAF RME+ +F
Sbjct: 120 HILTRMRYFDKAWELMEEIQQTHPSLLTLKSMSIMLSRIAKFQSYEDTLEAFGRMEKNVF 179
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA 230
G R+FG+ EFNVLL+AFCTQ++MKEARSVF K+ SRF+PN KTMNILLLGFKESGDVTA
Sbjct: 180 FG-REFGANEFNVLLRAFCTQRQMKEARSVFHKMHSRFSPNTKTMNILLLGFKESGDVTA 238
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+E+FYHEM+ RGF+P+ VTYNIRID YCKKGCFGD +RL EEME+ C P+L+TITTLIH
Sbjct: 239 VELFYHEMIRRGFKPNSVTYNIRIDAYCKKGCFGDGLRLLEEMEKANCPPTLETITTLIH 298
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
GAG+ +NI +AR+LF+E+ RNL+PDIG YNA +SSLIR R++ +A+ LMDEMEE+ IGH
Sbjct: 299 GAGVAQNISRARELFNEISIRNLQPDIGVYNAFMSSLIRSREVQSALMLMDEMEEEGIGH 358
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D++TYHTMF GLM+S+G+EGV +LY +MI FVPKTRT+VMLMK+FC N ++DL L+LW
Sbjct: 359 DSMTYHTMFRGLMRSNGIEGVSELYHKMIRRNFVPKTRTIVMLMKWFCQNQQLDLSLDLW 418
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
GYLIDRG+CPHGHALDLLVTGLCS G+ +EA EC+KQ L R R +SE +RML+RYLV+A
Sbjct: 419 GYLIDRGYCPHGHALDLLVTGLCSHGKVKEAVECAKQTLERGRPMSEGVFRMLERYLVEA 478
Query: 471 NANEKLEDLDRMIKNLQAVLPP 492
E L LD+MIK L VLPP
Sbjct: 479 GEGEMLWKLDQMIKKLHTVLPP 500
>gi|224139118|ref|XP_002326772.1| predicted protein [Populus trichocarpa]
gi|222834094|gb|EEE72571.1| predicted protein [Populus trichocarpa]
Length = 512
Score = 705 bits (1820), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 327/475 (68%), Positives = 405/475 (85%), Gaps = 3/475 (0%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
+T+TQS E+ERI RIINDHPFP+QPLHPTL H+P T L++ VENVLGRLFAAHSNGL
Sbjct: 32 ATSTQSIEVERIARIINDHPFPNQPLHPTLTHHIPPTL-LTTAFVENVLGRLFAAHSNGL 90
Query: 85 KALEFFKFTLQH-PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
KALEFFK++L + HF+P+PD+FEKTLHILARMRYFD+AW+LM + +THP LLTLKSMS
Sbjct: 91 KALEFFKYSLNNQTHFSPSPDSFEKTLHILARMRYFDKAWDLMVEIGKTHPFLLTLKSMS 150
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
IML +I+KF+SYEETL+AF++ME+ +FVG RKFG EEFNVLL+AFCT +++KEA+SVFVK
Sbjct: 151 IMLCKIAKFRSYEETLDAFEKMEKRVFVG-RKFGVEEFNVLLRAFCTVRKLKEAKSVFVK 209
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ RF PN KTMNILLLGFKES DVTAME+FYHEMV RGF+PS +Y IRID YCKKG F
Sbjct: 210 MHERFPPNVKTMNILLLGFKESRDVTAMELFYHEMVKRGFKPSSSSYGIRIDAYCKKGYF 269
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+R+FEEMER CLP+L+T+TTLIHGAG+ RN +AR+LFDE+PKRNL+ D GAYNA+
Sbjct: 270 ADALRIFEEMERANCLPTLETVTTLIHGAGVARNAMKARELFDEIPKRNLQADTGAYNAL 329
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
ISSL++CR++ +A++LMDEME+ I +D++TYHTMF GLMKS +EGVC+LY +MI+ F
Sbjct: 330 ISSLVKCREVKSAIQLMDEMEKNNIHYDDMTYHTMFLGLMKSGSIEGVCELYHKMIDRNF 389
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
VPKTRTVVMLMKFFCVN ++DLGLNLWGYL+ +G+CPH HALDLLVTGLCSRGR EAF+
Sbjct: 390 VPKTRTVVMLMKFFCVNSQIDLGLNLWGYLVGKGYCPHHHALDLLVTGLCSRGRSHEAFK 449
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
CSKQ L R VSEA Y ML+R+L+Q+N +KL +L++MI+ LQ+VLPP + +
Sbjct: 450 CSKQSLERGIHVSEAVYGMLERFLLQSNMTDKLGELNQMIEKLQSVLPPSSGNYI 504
>gi|255580386|ref|XP_002531020.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529395|gb|EEF31358.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 530
Score = 688 bits (1776), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/473 (68%), Positives = 394/473 (83%), Gaps = 2/473 (0%)
Query: 27 TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA 86
T SE+ERIT+IIND+ FP++ L+PTLL+HL LS+ VENVLGRLFAAHSNGLKA
Sbjct: 54 THSISEVERITKIINDNSFPNESLYPTLLKHL-NPAALSTDFVENVLGRLFAAHSNGLKA 112
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIML 146
LEFF+F+L+H HF P+ AFE TLHILARMRYF++AWELM + ++HPSLLTLKSM IML
Sbjct: 113 LEFFRFSLRHSHFNPSSFAFEMTLHILARMRYFEKAWELMMEIGKSHPSLLTLKSMGIML 172
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
S+I+KFQSYE+TLEAF RME+ +FVG + FG+EEFNVLLQAFC+Q+E+KEARSVF K+
Sbjct: 173 SKIAKFQSYEDTLEAFKRMEKTVFVG-KTFGTEEFNVLLQAFCSQREVKEARSVFQKMHD 231
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+F PN KTMNILLLGFK++ D+TAME+FYHE+V RGF+ + +TYNIRID YCKKG FGD
Sbjct: 232 QFNPNTKTMNILLLGFKKARDITAMELFYHEIVRRGFKATSLTYNIRIDAYCKKGYFGDG 291
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+R+FEEME+ C P+L+TITTLIHGAG+ RNIH+AR LFDE+ KRNLKPD GAYNA+ISS
Sbjct: 292 LRIFEEMEKDNCPPTLETITTLIHGAGVARNIHKARHLFDEIGKRNLKPDTGAYNALISS 351
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L++C+D+ +AM LMDEMEEK IG D+VTYHT+FFGLMK + EGVC LY RMI FVPK
Sbjct: 352 LVKCKDIESAMRLMDEMEEKHIGRDSVTYHTIFFGLMKLNDTEGVCDLYHRMISRDFVPK 411
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
TRTVVMLMKFFCVN R+DLGL W Y++D+G+CPHGHALDLLVTGLCSRGR EA+ECSK
Sbjct: 412 TRTVVMLMKFFCVNSRLDLGLAFWQYMLDKGYCPHGHALDLLVTGLCSRGRLLEAYECSK 471
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
Q + R ++SE YRML+R L Q++ +KL +LD+MIK LQ+VLPP +A
Sbjct: 472 QFVERGMRMSEVVYRMLERSLQQSDFTDKLRELDQMIKKLQSVLPPSKGHALA 524
>gi|449451922|ref|XP_004143709.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
gi|449520004|ref|XP_004167024.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Cucumis sativus]
Length = 504
Score = 656 bits (1692), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/470 (65%), Positives = 386/470 (82%), Gaps = 2/470 (0%)
Query: 23 LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSN 82
L ++ ++EIERI +IINDHPFPDQPLHPTLL +P P S+T + +VLG+LFAAHSN
Sbjct: 31 LHPSSKSTTEIERIAKIINDHPFPDQPLHPTLLHLIPSPLP-SNTFLNDVLGQLFAAHSN 89
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
GLKALEFFKF L H PT DAFEKTLHIL+RMRYFDQ+WELM +++THP LLTLKSM
Sbjct: 90 GLKALEFFKFCLHHSQAPPTSDAFEKTLHILSRMRYFDQSWELMREIRQTHPFLLTLKSM 149
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI+LSRI+KF S+EET+EAF RME E+FVG RKFG+EEFNVLL+AFCTQ++MKEARSVF
Sbjct: 150 SILLSRIAKFLSFEETIEAFQRMENEVFVG-RKFGTEEFNVLLRAFCTQRQMKEARSVFH 208
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
K+ SRF PN KT+N+LLLGFKES D+T++E+FYHEM+ RGF+P+ VTY+IRID YCKKGC
Sbjct: 209 KMYSRFPPNIKTINLLLLGFKESSDITSVELFYHEMIKRGFKPNAVTYSIRIDAYCKKGC 268
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F D +R+F+EMER C P+L+TITTLIHGAG+V++ +ARQLFDE+P RNL PDIGAYNA
Sbjct: 269 FVDGLRVFKEMERAKCEPTLETITTLIHGAGIVKDKTKARQLFDEIPLRNLCPDIGAYNA 328
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ISSLIR D+ +A +M++ME K I HD+VTYH MF GL++ + G +LY +M+
Sbjct: 329 LISSLIRSGDVKSAASVMEDMEAKHIEHDSVTYHMMFSGLIRLEDVGGFYELYIKMVGRN 388
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
FVPKTRT VM+MKFFC N RVDLGL W YL+++G+CPH H LDLLVTGLC+RG +AF
Sbjct: 389 FVPKTRTAVMIMKFFCENRRVDLGLGFWAYLVEKGYCPHSHVLDLLVTGLCARGMVLQAF 448
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
ECSKQML R RQ+SEA++ +++R L++A+A +K E+L+R+ K L+ VLPP
Sbjct: 449 ECSKQMLERGRQMSEAAFLIMERCLLKAHATDKYEELERLRKKLKTVLPP 498
>gi|356573388|ref|XP_003554843.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g61360-like [Glycine max]
Length = 491
Score = 655 bits (1691), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 307/472 (65%), Positives = 386/472 (81%), Gaps = 2/472 (0%)
Query: 21 ALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAH 80
+LL + + +++ +TR INDHPFP QPL PTLL LP +T S++LVEN+LGRLFA+H
Sbjct: 7 SLLTTCSMDGLDVDTLTRTINDHPFPLQPLQPTLLHLLPPST-FSTSLVENILGRLFASH 65
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
SNGLKALEFF ++L H HF +P + TLHIL RMRYFD+AW L+ + RTHPSLLTLK
Sbjct: 66 SNGLKALEFFNYSLVHSHFPLSPASLNMTLHILTRMRYFDKAWVLLRDIARTHPSLLTLK 125
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
SMSI+LS+I+KFQS+E+TL+ F RME E+FVG R+FG++EFNVLL+AFCTQ++MKEARSV
Sbjct: 126 SMSIVLSKIAKFQSFEDTLDGFRRMEDEVFVG-REFGTDEFNVLLKAFCTQRQMKEARSV 184
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F KL+ RF+PN K+MNILLLGFKESG+VT++E+FYHEMV RGF P VT+NIRID YCKK
Sbjct: 185 FAKLVPRFSPNTKSMNILLLGFKESGNVTSVELFYHEMVRRGFSPDGVTFNIRIDAYCKK 244
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
GCFGDA+RL EEMER +P+++TITTLIHGAGLVRN +A QLF E+P RN+ D GAY
Sbjct: 245 GCFGDALRLLEEMERRNVVPTIETITTLIHGAGLVRNKDKAWQLFKEIPSRNMVADAGAY 304
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA+I++L+R RD+ +A LMDEM EK I D+VTYHTMF G M+S G+EGV KLY +M +
Sbjct: 305 NALITALVRTRDIESASSLMDEMVEKCIELDSVTYHTMFLGFMRSRGIEGVSKLYQKMTQ 364
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
FVPKTRTVVMLMK+FC N+R+DL + LW YL+++G+CPH HALDLLVTGLC+RG +
Sbjct: 365 SNFVPKTRTVVMLMKYFCQNYRLDLSVCLWKYLVEKGYCPHAHALDLLVTGLCARGLVHD 424
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
AFECSKQML R R +S AS+ ML+R+L+QA+ +KL++LD+MIK LQ VLPP
Sbjct: 425 AFECSKQMLERGRHMSNASFLMLERFLLQASDMDKLKELDQMIKKLQTVLPP 476
>gi|124360979|gb|ABN08951.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 511
Score = 611 bits (1575), Expect = e-172, Method: Compositional matrix adjust.
Identities = 289/469 (61%), Positives = 373/469 (79%), Gaps = 4/469 (0%)
Query: 27 TTQSSE---IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
TTQS I+ IT IIN+HPFP +PLHPTLL + P TTP+ S+L++N+L RLFA+HSNG
Sbjct: 29 TTQSKNLPNIDTITTIINNHPFPQKPLHPTLLHYFPPTTPIPSSLIQNILIRLFASHSNG 88
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
LKALEFF FT+++ H P + E TLHIL RMRYFD+AW L+ + T+P LLTLK+M+
Sbjct: 89 LKALEFFNFTIKNTHTNPCASSLEITLHILTRMRYFDKAWSLLIQIANTYPGLLTLKAMN 148
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
IML++I+K++S+EETL+ F RME E+FVG R+FGS+EFNVLL+ F TQ++MKEARSVFV+
Sbjct: 149 IMLAKIAKYKSFEETLDGFRRMEEEVFVG-REFGSDEFNVLLKVFATQRQMKEARSVFVR 207
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ RF + K+MNILLLGFKE+GDVT++E+FYHEMV RGF+P V++ IRID YCKKG F
Sbjct: 208 FVDRFKADTKSMNILLLGFKETGDVTSVELFYHEMVKRGFKPDSVSFGIRIDAYCKKGRF 267
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA+RL EEME + S++TITTLIHGAGLV+N +A QLF+E+P RNL D G YNA+
Sbjct: 268 GDALRLLEEMESRKFVVSVETITTLIHGAGLVQNPGKAWQLFNEIPLRNLVVDSGVYNAL 327
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I++L+R RD+ +A+ LMD M EK+I D VTYHT+F GLMKS G+EGV +LY +M + KF
Sbjct: 328 ITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHTIFLGLMKSRGIEGVSELYQKMTKRKF 387
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
VPKTRTVV+LMK+FC N R+DL L+LW YL+++G CPH HALDLLVTGLCSRG +EAF
Sbjct: 388 VPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFS 447
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
CSKQ L R R +S ++ ML+R L Q+ +KL++LD+MIK L++VLPP
Sbjct: 448 CSKQTLERGRYISSTAFLMLERLLKQSRDVDKLKELDQMIKKLRSVLPP 496
>gi|357501695|ref|XP_003621136.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496151|gb|AES77354.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 821
Score = 608 bits (1567), Expect = e-171, Method: Compositional matrix adjust.
Identities = 289/469 (61%), Positives = 373/469 (79%), Gaps = 4/469 (0%)
Query: 27 TTQSSE---IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
TTQS I+ IT IIN+HPFP +PLHPTLL + P TTP+ S+L++N+L RLFA+HSNG
Sbjct: 29 TTQSKNLPNIDTITTIINNHPFPQKPLHPTLLHYFPPTTPIPSSLIQNILIRLFASHSNG 88
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
LKALEFF FT+++ H P + E TLHIL RMRYFD+AW L+ + T+P LLTLK+M+
Sbjct: 89 LKALEFFNFTIKNTHTNPCASSLEITLHILTRMRYFDKAWSLLIQIANTYPGLLTLKAMN 148
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
IML++I+K++S+EETL+ F RME E+FVG R+FGS+EFNVLL+ F TQ++MKEARSVFV+
Sbjct: 149 IMLAKIAKYKSFEETLDGFRRMEEEVFVG-REFGSDEFNVLLKVFATQRQMKEARSVFVR 207
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ RF + K+MNILLLGFKE+GDVT++E+FYHEMV RGF+P V++ IRID YCKKG F
Sbjct: 208 FVDRFKADTKSMNILLLGFKETGDVTSVELFYHEMVKRGFKPDSVSFGIRIDAYCKKGRF 267
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA+RL EEME + S++TITTLIHGAGLV+N +A QLF+E+P RNL D G YNA+
Sbjct: 268 GDALRLLEEMESRKFVVSVETITTLIHGAGLVQNPGKAWQLFNEIPLRNLVVDSGVYNAL 327
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I++L+R RD+ +A+ LMD M EK+I D VTYHT+F GLMKS G+EGV +LY +M + KF
Sbjct: 328 ITTLVRNRDVVSALSLMDGMIEKQILPDGVTYHTIFLGLMKSRGIEGVSELYQKMTKRKF 387
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
VPKTRTVV+LMK+FC N R+DL L+LW YL+++G CPH HALDLLVTGLCSRG +EAF
Sbjct: 388 VPKTRTVVVLMKYFCHNSRLDLSLSLWNYLVEKGHCPHAHALDLLVTGLCSRGLVQEAFS 447
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
CSKQ L R R +S ++ ML+R L Q+ +KL++LD+MIK L++VLPP
Sbjct: 448 CSKQTLERGRYISSTAFLMLERLLKQSRDVDKLKELDQMIKKLRSVLPP 496
>gi|297820986|ref|XP_002878376.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324214|gb|EFH54635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 498
Score = 571 bits (1471), Expect = e-160, Method: Compositional matrix adjust.
Identities = 286/470 (60%), Positives = 368/470 (78%), Gaps = 5/470 (1%)
Query: 31 SEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFF 90
+EIE ITRIINDHPFP+ P+ P +H+P ++ LS V VLG LFAAHSNGLKALEFF
Sbjct: 32 TEIELITRIINDHPFPNHPIQPIFTKHIPLSS-LSPEFVSEVLGSLFAAHSNGLKALEFF 90
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
K++L+ + +PT D+FEKTLHILARMRYFDQAW LM+ +++ +P LL+ KSMSI+L +I+
Sbjct: 91 KYSLKSSNSSPTSDSFEKTLHILARMRYFDQAWALMAEIRKDYPDLLSFKSMSIILCKIA 150
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP 210
KF SYEETLEAF +ME+EIF +KFG +EFN+LL+AFCT++EMKEARS+F KL SRF P
Sbjct: 151 KFGSYEETLEAFVKMEKEIFR--KKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFKP 208
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ KTMNILLLGFKE+GD+TA E+FYHEMV RGF+P+ VTY IRIDG+CKK FG+A+RLF
Sbjct: 209 DVKTMNILLLGFKEAGDITATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLF 268
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E+M+R ++Q +TTLIHG+G+VRN +ARQLFDE+PKR L PD GAYNA++SSL++C
Sbjct: 269 EDMDRQDIYITVQILTTLIHGSGVVRNKIKARQLFDEIPKRGLTPDCGAYNALMSSLMKC 328
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS--GLEGVCKLYDRMIEGKFVPKTR 388
D++ A+++M EMEEK I D+VT+H+MF G+MKS G GVC+ Y +M E VPKT
Sbjct: 329 GDVSDAIKVMKEMEEKEIEPDSVTFHSMFIGMMKSKEFGFSGVCEYYQKMKERSLVPKTP 388
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
TVVMLMK FC N V+LGL+LW Y++++G+CPHGHAL+LL T LC+R R +AFECS+Q
Sbjct: 389 TVVMLMKLFCQNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSRQT 448
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
+ R R VSE YRML+ L N +KLE+L I+ L + LPPP Q +
Sbjct: 449 VERGRCVSEPVYRMLETSLSSNNELKKLEELKGKIQKLHSFLPPPGTQLI 498
>gi|15233088|ref|NP_191695.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264589|sp|Q9M2C8.1|PP291_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g61360
gi|6850903|emb|CAB71066.1| putative protein [Arabidopsis thaliana]
gi|25054868|gb|AAN71923.1| unknown protein [Arabidopsis thaliana]
gi|332646669|gb|AEE80190.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 498
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 278/458 (60%), Positives = 357/458 (77%), Gaps = 5/458 (1%)
Query: 41 NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFT 100
N HPFP+ P+ P L +H+P ++ LS V VLGRLFAAHSNGLKALEFFK++L+ +
Sbjct: 42 NGHPFPNHPIQPILAKHIPLSS-LSPEFVSEVLGRLFAAHSNGLKALEFFKYSLKSSKSS 100
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PT D+FEKTLHILARMRYFDQAW LM+ V++ +P+LL+ KSMSI+L +I+KF SYEETLE
Sbjct: 101 PTSDSFEKTLHILARMRYFDQAWALMAEVRKDYPNLLSFKSMSILLCKIAKFGSYEETLE 160
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL 220
AF +ME+EIF +KFG +EFN+LL+AFCT++EMKEARS+F KL SRF P+ KTMNILLL
Sbjct: 161 AFVKMEKEIFR--KKFGVDEFNILLRAFCTEREMKEARSIFEKLHSRFNPDVKTMNILLL 218
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
GFKE+GDVTA E+FYHEMV RGF+P+ VTY IRIDG+CKK FG+A+RLFE+M+R+
Sbjct: 219 GFKEAGDVTATELFYHEMVKRGFKPNSVTYGIRIDGFCKKRNFGEALRLFEDMDRLDFDI 278
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++Q +TTLIHG+G+ RN +ARQLFDE+ KR L PD GAYNA++SSL++C D++ A+++M
Sbjct: 279 TVQILTTLIHGSGVARNKIKARQLFDEISKRGLTPDCGAYNALMSSLMKCGDVSGAIKVM 338
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSS--GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
EMEEK I D+VT+H+MF G+MKS G GVC+ Y +M E VPKT T+VMLMK FC
Sbjct: 339 KEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYQKMKERSLVPKTPTIVMLMKLFC 398
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
N V+LGL+LW Y++++G+CPHGHAL+LL T LC+R R +AFECS Q + R R VSE
Sbjct: 399 HNGEVNLGLDLWKYMLEKGYCPHGHALELLTTALCARRRANDAFECSWQTVERGRCVSEP 458
Query: 459 SYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQ 496
YRML+ L N +KLE+L I+ L + LPPP Q
Sbjct: 459 VYRMLETSLSSNNELKKLEELKEEIQKLHSFLPPPEIQ 496
>gi|115469690|ref|NP_001058444.1| Os06g0694600 [Oryza sativa Japonica Group]
gi|53791827|dbj|BAD53893.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|53792848|dbj|BAD53881.1| pentatricopeptide repeat-containing protein-like [Oryza sativa
Japonica Group]
gi|113596484|dbj|BAF20358.1| Os06g0694600 [Oryza sativa Japonica Group]
Length = 484
Score = 341 bits (874), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 176/409 (43%), Positives = 257/409 (62%), Gaps = 8/409 (1%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ--AWELMSHVQRTHPSLLTLKSMS 143
AL F+ L P F P P+A L L ++ L+ + THP LL+ +++
Sbjct: 66 ALSLFRRLLALPGF-PVPEASLPALLRLLARSRRHAVLSFRLLDSLPPTHPHLLSTPALA 124
Query: 144 IMLSRI----SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
++LS + S++ + FD R R+FG E N LL+AFC + + EAR+
Sbjct: 125 VLLSTALSASAPGASFDAAVTCFDSAARVWARAGREFGVAELNALLRAFCARGRVAEARA 184
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+F + + P+ +T N LLLGFKE+G+ A+++FYH+ VLRGF P V+Y +R+D YCK
Sbjct: 185 LFHRYCDAYPPDARTFNTLLLGFKEAGNAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCK 244
Query: 260 KGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KG F DA+ L +EM +R C P+LQ TTLI+GAG+VRN +ARQLFDEM + + PD G
Sbjct: 245 KGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIRARQLFDEMGQWGVTPDRG 304
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
A+NA++ + +R RDL + M +M EME K IG D+V+Y+TM G + LEG+ K+Y +M
Sbjct: 305 AHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKVYSKM 364
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ F+P+TRT ++LMK FC N R DLGL LW YL+ +G PH HALD+LVTGLC RG
Sbjct: 365 VGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCCRGVV 424
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
EA+ C ++M+ +E ++R+L+ +L + EKLE++ +M+K Q
Sbjct: 425 LEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIRQMMKAAQ 473
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 109/270 (40%), Gaps = 5/270 (1%)
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
+ +AL+ F F P ++ + + F A +L+ +++ TL
Sbjct: 209 EAGNAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTL 268
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ + ++ ++ + FD M + R N L+ A+ ++++ +
Sbjct: 269 QVFTTLIYGAGIVRNAIRARQLFDEMGQWGVTPDRG----AHNALMGAYVRARDLQSGMT 324
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
V ++ + ++ + N +L GF+ GD+ + Y +MV GF P T + + +C
Sbjct: 325 VMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKVYSKMVGSGFMPRTRTTMLLMKVFC 384
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ + L++ + C+P + L+ G + +A + F EM + + P
Sbjct: 385 ENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTER 444
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
A+ + L R R+ E+ M+ ++
Sbjct: 445 AFRVLEGFLKRKREFEKLEEIRQMMKAAQL 474
>gi|242096870|ref|XP_002438925.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
gi|241917148|gb|EER90292.1| hypothetical protein SORBIDRAFT_10g028400 [Sorghum bicolor]
Length = 485
Score = 324 bits (831), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 161/371 (43%), Positives = 242/371 (65%), Gaps = 5/371 (1%)
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRI----SKFQSYEETLEAFDRMEREIFVGIRKFG 177
++ L+ + THP LL+ +++++LS + S++ + FD R R FG
Sbjct: 104 SFPLLESLPSTHPHLLSTPALAVLLSTALSASAPGASFDAAVTCFDSAARVWARAGRAFG 163
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ E N LL+AFC + + EAR++F + + P+ +T N LLLGFKE+G A+++FYH+
Sbjct: 164 AAELNALLRAFCARGRVAEARALFHRYCDAYPPDTRTFNTLLLGFKEAGHAHALDLFYHD 223
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVR 296
VLRGF P V+Y +R+D YCKKG F DA+ L EEM ++V C P+LQ TLI+GAG+VR
Sbjct: 224 AVLRGFVPDAVSYCVRMDAYCKKGRFLDALELLEEMRKKVDCKPTLQVFATLIYGAGIVR 283
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +AR LFDEM K + PD GA+NA++ + +R RDL +AM +M +ME K IG D+V+Y+
Sbjct: 284 SAARARLLFDEMEKWGVTPDRGAHNALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYN 343
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
TM G + LEG+ K+Y +M+ F+P+TRT ++LMK FC N R DLGL LW YL+ +
Sbjct: 344 TMLCGFQRVGDLEGIWKVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGK 403
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G PH HALD+LVTGLC RG EA+ C ++++ +E ++R+L+ +L + K+
Sbjct: 404 GCVPHRHALDILVTGLCCRGVVSEAYRCFREIIEMGMAPTERAFRVLEGFLRRTRELGKV 463
Query: 477 EDLDRMIKNLQ 487
E++ +M+K Q
Sbjct: 464 EEIRQMMKAAQ 474
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/290 (21%), Positives = 121/290 (41%), Gaps = 9/290 (3%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
P + T +LG A H++ AL+ F F P ++ + + F A
Sbjct: 196 PDTRTFNTLLLGFKEAGHAH---ALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFLDA 252
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
EL+ +++ TL+ + ++ +S FD ME+ R N
Sbjct: 253 LELLEEMRKKVDCKPTLQVFATLIYGAGIVRSAARARLLFDEMEKWGVTPDRG----AHN 308
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ A+ ++++ A +V + + ++ + N +L GF+ GD+ + Y +MV
Sbjct: 309 ALMGAYVRGRDLQSAMTVMGDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVYSKMVSS 368
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF P T + + +C+ G + L++ + C+P + L+ G + +A
Sbjct: 369 GFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGKGCVPHRHALDILVTGLCCRGVVSEA 428
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI-GH 350
+ F E+ + + P A+ + L R R+L E+ M+ ++ GH
Sbjct: 429 YRCFREIIEMGMAPTERAFRVLEGFLRRTRELGKVEEIRQMMKAAQLEGH 478
>gi|413934704|gb|AFW69255.1| hypothetical protein ZEAMMB73_056731 [Zea mays]
Length = 485
Score = 309 bits (791), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 170/415 (40%), Positives = 252/415 (60%), Gaps = 6/415 (1%)
Query: 79 AHSNGLKALEFFKFTLQHPHF-TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLL 137
+H+ L AL ++ L HF P + R+ ++ L+ + THP LL
Sbjct: 60 SHTPPLPALSLYRRLLALRHFNVPESSLPVLLRLLARSRRHAHLSFPLLESLPYTHPHLL 119
Query: 138 TLKSMSIMLSRISKF----QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
+ +++ +LS S++ + F+ R R FG+ E NVLL+AFC +
Sbjct: 120 STPALAALLSTALSASAPGASFDAAVTCFESAARVWARAGRAFGAAELNVLLRAFCARGR 179
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ EAR++F + + P+ +T N LLLGFKE+G V A+++FYH+ VLRGF V+Y IR
Sbjct: 180 VAEARALFHRYCDAYPPDTRTFNTLLLGFKEAGHVHALDLFYHDAVLRGFVADAVSYCIR 239
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACL-PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+D YCKKG F DA+ L +EM P+LQ TTLI+GAG+VRN +AR LFDEM K
Sbjct: 240 MDAYCKKGRFLDALELLDEMRSKGDYKPTLQVFTTLIYGAGIVRNAARARALFDEMEKWG 299
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ PD GA+NA++ +R RDL +AM +M +ME K IG D+V+Y+TM G + LEG+
Sbjct: 300 VTPDRGAHNALMGVYVRVRDLQSAMAVMSDMERKGIGLDDVSYNTMLCGFQRVGDLEGIW 359
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
K+Y +M+ F+P+TRT ++LMK FC N R DLGL LW YL+ RG PH HALD+LVTGL
Sbjct: 360 KVYSKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGRGCVPHQHALDILVTGL 419
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
C RG EA+ C ++++ +E ++ +L+ +L + + K+E++ +M+K Q
Sbjct: 420 CCRGVVAEAYRCFREIIETGMAPTERAFTVLEGFLRRKREHGKVEEIRQMMKAAQ 474
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/236 (20%), Positives = 100/236 (42%), Gaps = 7/236 (2%)
Query: 117 RYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
R+ D A EL+ ++ TL+ + ++ ++ FD ME+ R
Sbjct: 248 RFLD-ALELLDEMRSKGDYKPTLQVFTTLIYGAGIVRNAARARALFDEMEKWGVTPDRG- 305
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
N L+ + ++++ A +V + + ++ + N +L GF+ GD+ + Y
Sbjct: 306 ---AHNALMGVYVRVRDLQSAMAVMSDMERKGIGLDDVSYNTMLCGFQRVGDLEGIWKVY 362
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+MV GF P T + + +C+ G + L++ + C+P + L+ G
Sbjct: 363 SKMVSSGFMPRTRTTMLLMKVFCENGRPDLGLELWDYLMGRGCVPHQHALDILVTGLCCR 422
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI-GH 350
+ +A + F E+ + + P A+ + L R R+ E+ M+ ++ GH
Sbjct: 423 GVVAEAYRCFREIIETGMAPTERAFTVLEGFLRRKREHGKVEEIRQMMKAAQLQGH 478
>gi|125598350|gb|EAZ38130.1| hypothetical protein OsJ_22479 [Oryza sativa Japonica Group]
Length = 464
Score = 283 bits (723), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 158/409 (38%), Positives = 232/409 (56%), Gaps = 28/409 (6%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ--AWELMSHVQRTHPSLLTLKSMS 143
AL F+ L P F P P+A L L ++ L+ + THP LL+ +++
Sbjct: 66 ALSLFRRLLALPGF-PVPEASLPALLRLLARSRRHAVLSFRLLDSLPPTHPHLLSTPALA 124
Query: 144 IMLSRI----SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
++LS + S++ + FD R R+FG E N + +
Sbjct: 125 VLLSTALSASAPGASFDAAVTCFDSAARVWARAGREFGVAELNGAAPRVLRPRPRRRGPR 184
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
E+G+ A+++FYH+ VLRGF P V+Y +R+D YCK
Sbjct: 185 AVPP--------------------EAGNAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCK 224
Query: 260 KGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KG F DA+ L +EM +R C P+LQ TTLI+GAG+VRN +ARQLFDEM + + PD G
Sbjct: 225 KGRFLDALDLLDEMRKRENCRPTLQVFTTLIYGAGIVRNAIRARQLFDEMGQWGVTPDRG 284
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
A+NA++ + +R RDL + M +M EME K IG D+V+Y+TM G + LEG+ K+Y +M
Sbjct: 285 AHNALMGAYVRARDLQSGMTVMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKVYSKM 344
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ F+P+TRT ++LMK FC N R DLGL LW YL+ +G PH HALD+LVTGLC RG
Sbjct: 345 VGSGFMPRTRTTMLLMKVFCENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCCRGVV 404
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
EA+ C ++M+ +E ++R+L+ +L + EKLE++ +M+K Q
Sbjct: 405 LEAYRCFREMIEMGMTPTERAFRVLEGFLKRKREFEKLEEIRQMMKAAQ 453
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/270 (17%), Positives = 109/270 (40%), Gaps = 5/270 (1%)
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
+ +AL+ F F P ++ + + F A +L+ +++ TL
Sbjct: 189 EAGNAQALDLFYHDAVLRGFVPDAVSYCVRMDAYCKKGRFLDALDLLDEMRKRENCRPTL 248
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ + ++ ++ + FD M + R N L+ A+ ++++ +
Sbjct: 249 QVFTTLIYGAGIVRNAIRARQLFDEMGQWGVTPDRG----AHNALMGAYVRARDLQSGMT 304
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
V ++ + ++ + N +L GF+ GD+ + Y +MV GF P T + + +C
Sbjct: 305 VMSEMERKGIGLDDVSYNTMLCGFQRIGDLEGIWKVYSKMVGSGFMPRTRTTMLLMKVFC 364
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ + L++ + C+P + L+ G + +A + F EM + + P
Sbjct: 365 ENARPDLGLELWDYLLGKGCVPHRHALDVLVTGLCCRGVVLEAYRCFREMIEMGMTPTER 424
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
A+ + L R R+ E+ M+ ++
Sbjct: 425 AFRVLEGFLKRKREFEKLEEIRQMMKAAQL 454
>gi|357117565|ref|XP_003560536.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g61360-like [Brachypodium distachyon]
Length = 419
Score = 270 bits (689), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 150/381 (39%), Positives = 219/381 (57%), Gaps = 16/381 (4%)
Query: 54 LLQHLPQTTPLSSTLVEN----VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
LL P PL + ++ + L +HS L AL F+ L PHF +
Sbjct: 50 LLTQAPAIPPLLTAVLPASPSLLTPHLLLSHSPPLPALSLFRRLLALPHFPVPESSLPVL 109
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
L +LA + + Q + + HP LL++ +S L + S+ + F+
Sbjct: 110 LRLLAHLSF--QPLDSLPPPTPAHPHLLSV-VLSTALCASAPGASFAAAVSCFESAA--- 163
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVT 229
+ E N LL+ FC + + EAR++F + + P+ +T N LLLGFKE+G
Sbjct: 164 -----SVWAXELNALLRVFCARGRVAEARALFHRYCDAYPPDTRTFNTLLLGFKEAGHAQ 218
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-CLPSLQTITTL 288
A+++FYH+ VLRGF P V+Y +R+D CKKG F DA+ + +EM R C P+LQ TTL
Sbjct: 219 ALDLFYHDAVLRGFVPDAVSYCVRMDALCKKGRFLDALEMLDEMRRRENCEPTLQVFTTL 278
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+GAG+ R+ +AR+LFDEM + + PD GA++A++ + +R R L + M +M+EME K I
Sbjct: 279 IYGAGIARDAARARRLFDEMEQCAVTPDRGAHDALMGAYVRARYLQSGMAVMEEMEHKGI 338
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
G D+VTY+TM LEG+ K+Y +MI F+P+TRT ++LMK FC N R DLGL
Sbjct: 339 GLDDVTYNTMLCVFAGVGDLEGIWKIYSKMICSGFMPRTRTTMLLMKVFCENGRPDLGLE 398
Query: 409 LWGYLIDRGFCPHGHALDLLV 429
LW Y+I +G PH HALD+LV
Sbjct: 399 LWDYMIGKGCVPHRHALDVLV 419
>gi|255548349|ref|XP_002515231.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545711|gb|EEF47215.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 505
Score = 255 bits (652), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 156/483 (32%), Positives = 263/483 (54%), Gaps = 23/483 (4%)
Query: 22 LLFST--TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTP-----LSSTLVENVLG 74
L FST T+ + ++E + RII + +Q+L Q+ LS+ L++ VL
Sbjct: 26 LFFSTNPTSLNDDVEVVYRIITSS---------SSVQNLKQSLTSTGIFLSNDLIDKVLK 76
Query: 75 RLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHP 134
R+ +H N L+ALEFF +T F TP + + L+IL R R FD W+++ ++R
Sbjct: 77 RVRFSHGNPLQALEFFYYTDNRKGFYHTPYSLDTILYILGRSRKFDHIWDVLIKMKRKDR 136
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
L++ ++M I+L+R++K S +T+E+F + ++ FV + + FN LL+ C +K M
Sbjct: 137 FLISPRTMQIVLARVAKLCSVRQTVESFRKFKK--FVSV--LDTTCFNALLRTLCQEKSM 192
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+AR+V+ +L F PN +T NILL G+K+S + E+F+ EM G +P VV+YN I
Sbjct: 193 TDARNVYHRLKKEFKPNLQTFNILLSGWKQSEEA---ELFFEEMRELGIKPDVVSYNSLI 249
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D YCK A ++ E+M P + T T++I G GLV +AR + +EM +
Sbjct: 250 DVYCKDREMEKAYKVVEKMREEDISPDVITYTSIIGGLGLVGQPDKARDILNEMKEYGCY 309
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ AYNA+I + + L A LMDEM K + + TY+ F S+ L L
Sbjct: 310 PDVAAYNAVIRNYCIAKRLGDASNLMDEMASKGLSPNATTYNLFFRVFYWSNDLRNSWSL 369
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
Y RM+E +P T++ + L++ F + +V++ L LW ++++GF + D+L LC
Sbjct: 370 YRRMMESGCLPNTQSCMFLIRLFRKHEKVEMALTLWNDMVEKGFGSYILVSDVLFDLLCD 429
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
G+ EA +C QM+ + + S S+R ++ + N ++ L +L + + + + P
Sbjct: 430 MGKLVEAEKCFLQMIEKGHKPSNVSFRRIKVLMELVNKHDALLNLQKKMAIFGSSIQLPE 489
Query: 495 RQQ 497
R++
Sbjct: 490 REE 492
>gi|357442157|ref|XP_003591356.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480404|gb|AES61607.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 518
Score = 245 bits (625), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 146/457 (31%), Positives = 247/457 (54%), Gaps = 13/457 (2%)
Query: 24 FSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTP-LSSTLVENVLGRLFAAHSN 82
ST + ++ ++ I+ P+ TL Q L T LS+ L++ VL R+ H+N
Sbjct: 19 LSTFNPNDDVHKVYTILTTTSSPE-----TLKQSLKSTQIFLSNELIDQVLKRVRFGHAN 73
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
+ LEFF++T + F T + + L+IL R R FD WEL+ +R +++T +++
Sbjct: 74 PNQTLEFFRYTGRRKGFYHTAYSLDTMLYILGRSRMFDHVWELLIEARRKDQNVITPRTV 133
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++L R++K S +T+E F + ++ + +G FN LL+ C +K M +AR+V+
Sbjct: 134 MVVLGRVAKVCSVRQTVETFRKFKKIV----PDYGVNCFNALLRTLCQEKSMTDARNVYH 189
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
L F PN +T NILL G+K D E+F +EM G P VVTYN +D YCK
Sbjct: 190 SLKHNFRPNLQTFNILLSGWKNVEDA---ELFVNEMKEMGVEPDVVTYNSLVDVYCKGRE 246
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A ++F+EM P + T T++I G GLV +AR + EM + + PD+ AYNA
Sbjct: 247 IEKAYKVFDEMREKDLSPDVITYTSVIGGLGLVGQPDKARDVLKEMKEYGVYPDVPAYNA 306
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
I + + L A EL+DEM K + + TY+ F S+ L+ LY RM+
Sbjct: 307 AIRNYCIAKRLGIAFELVDEMVNKGLSPNATTYNLFFRVFYWSNDLQSSWNLYKRMMGEG 366
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T++ + L++ F + ++++ L LWG ++++GF + D+L LC G+ EA
Sbjct: 367 CLPYTQSCMFLIRLFKRHEKMEMALQLWGEMVEKGFGSYTLVSDVLFDMLCDMGKLMEAE 426
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+C +M+ + ++ S S++ ++ + AN +E +++L
Sbjct: 427 KCFLEMIEKGQRPSNVSFKRIKVLMELANKHEAIQNL 463
>gi|225437663|ref|XP_002279193.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Vitis vinifera]
Length = 526
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/473 (32%), Positives = 250/473 (52%), Gaps = 17/473 (3%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTP-LSSTLVENVLGRLFAAHSNGL 84
TT + ++E + RI++ L Q L + LS+ L++ VL R+ +H N
Sbjct: 53 TTVDNGDVETVFRIVSSASSTR-----NLKQSLKSSGVFLSNDLIDKVLKRVRFSHGNPF 107
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+AL FF +T + F TP + + L+IL R R FDQ WEL+ ++R SL++ +S+ +
Sbjct: 108 QALAFFNYTNKRKGFYHTPFSLDTMLYILGRSRRFDQIWELLVDMRRKDQSLISPRSVQV 167
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L RI+K S ++T+E+F + ++ + +F + FN LL+ C +K M++AR+V+ L
Sbjct: 168 VLGRIAKVCSVKQTVESFRKFKKLV----PEFDTACFNALLRTLCQEKSMRDARNVYHSL 223
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
F P+ +T NILL G+K + + E F+ EM G P VV+YN ID YCK
Sbjct: 224 KHDFRPDLRTFNILLSGWKSAEEA---EGFFDEMREMGVEPDVVSYNCLIDVYCKGREIE 280
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A ++ ++M P + + T++I G GLV +AR + EM + PD+ AYNA I
Sbjct: 281 RAYKVIDKMRDEQISPDVISYTSIIGGLGLVGQPDKARDVLKEMKEYGCYPDVAAYNAAI 340
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L A LMDEM K + + TY+ F S+ L C LY RM + +
Sbjct: 341 RNFCIANRLGDADGLMDEMVGKGLSPNATTYNLFFRCFYWSNDLGRSCGLYQRMKKTGCL 400
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T++ + L + F +V++ L LW ++++GF + D+L LC G+ E +C
Sbjct: 401 PNTQSCMFLTRLFRRQEKVEMALELWNDMVEKGFGSYILVSDVLFDMLCDMGKLVEVEKC 460
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQ 497
QM+ + + S S+R ++ + AN +E L++L + A+ P T+ Q
Sbjct: 461 CLQMIEKGHKPSNVSFRRIKVLMELANKHEALQNLTEKM----AMFGPSTQVQ 509
>gi|224093900|ref|XP_002310039.1| predicted protein [Populus trichocarpa]
gi|222852942|gb|EEE90489.1| predicted protein [Populus trichocarpa]
Length = 507
Score = 242 bits (618), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 139/416 (33%), Positives = 230/416 (55%), Gaps = 7/416 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS+ L++ VL R+ +H N L+AL+FF FT F + + + L+IL R R FD W
Sbjct: 70 LSNDLIDKVLKRVRFSHGNPLQALDFFNFTADRRGFYHSSYSLDTMLYILGRSRKFDHIW 129
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+++ ++R +L+T +++ ++L R++K S T+E+F + +R + V F + FN
Sbjct: 130 DVLIDIKRKDRNLITPRTLQVVLGRVAKVCSVRMTVESFWKFKRLVPV----FDTSCFNA 185
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL+ C +K M +AR+V+ L F PN +T NILL G+K S + E+FY EM G
Sbjct: 186 LLRTLCQEKSMSDARNVYHHLKKGFRPNLQTFNILLSGWKSSEEA---ELFYEEMKELGV 242
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+P +VTYN ID +CK A + M LP + T T++I G GLV +AR
Sbjct: 243 KPDIVTYNSLIDVFCKGRELEKAYGVVARMREEDILPDVITYTSIIGGLGLVGQPDKARD 302
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ EM + PD+ AYNA+I + + L+AA LM EME K + + +Y+ F
Sbjct: 303 MLKEMKEHGCYPDVAAYNAVIRNYCIAKRLDAAYSLMAEMESKGMSPNATSYNLFFRVFS 362
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S+ L Y RM++ +P T++ + L+K F + +V++ L LW ++++GF +
Sbjct: 363 WSNDLRNSWDFYGRMMDAGCLPNTQSCMFLIKLFKRHEKVEMALQLWNDMVEKGFGSYIL 422
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L+ LC G+ EA +C QM+ + + S S+R ++ + AN ++ + +L
Sbjct: 423 VSDVLLGMLCDMGKLVEAEKCFLQMVEKGHKPSNVSFRRIKVLMELANKHDAIRNL 478
>gi|449511317|ref|XP_004163923.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 239 bits (610), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 255/477 (53%), Gaps = 17/477 (3%)
Query: 25 STTTQS--SEIERITRIINDHPFPDQPLHPTLLQHLPQTTP--LSSTLVENVLGRLFAAH 80
ST QS IE + RII T ++H +++ LS+ L++ VL R+ +H
Sbjct: 32 STDNQSLHQNIETVFRIITTSS------SSTDMKHSLESSRVFLSNELIDGVLKRVRFSH 85
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
N L+ALEFF +T + F T + + L+IL R R FD+ W+++ V+ PSL++L+
Sbjct: 86 GNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLR 145
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++ ++L RI+K S +T+E+F + ++ + +F FN LL+ C +K M +AR+V
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKK----FVPEFDVTCFNALLRTLCQEKSMMDARNV 201
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ L S F PN +T NILL G+K S + E F+ EM+ G +P VV+YN +D YCK
Sbjct: 202 YHGLKSMFRPNLQTFNILLSGWKSSEEA---EGFFDEMIEMGVKPDVVSYNCLVDVYCKN 258
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
A ++ +M + T T++I G GLV +AR + EM + PD+ AY
Sbjct: 259 REMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAY 318
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA I + + L+ A +L+DEM K + + TY+ F S+ L+ LY RM++
Sbjct: 319 NATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMD 378
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T++ + L++ F + ++ L LW +I +GF + + L LC G+ E
Sbjct: 379 TGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIE 438
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQ 497
A C QM+ + + S S++ ++ + AN +E L++L + + ++ + P +Q
Sbjct: 439 AESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDDIIWIKKMPPLEQ 495
>gi|449466251|ref|XP_004150840.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Cucumis sativus]
Length = 495
Score = 239 bits (609), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/477 (31%), Positives = 255/477 (53%), Gaps = 17/477 (3%)
Query: 25 STTTQS--SEIERITRIINDHPFPDQPLHPTLLQHLPQTTP--LSSTLVENVLGRLFAAH 80
ST QS IE + RII T ++H +++ LS+ L++ VL R+ +H
Sbjct: 32 STDNQSLHQNIETVFRIITTSS------SSTDMKHSLESSRVFLSNELIDGVLKRVRFSH 85
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
N L+ALEFF +T + F T + + L+IL R R FD+ W+++ V+ PSL++L+
Sbjct: 86 GNPLQALEFFNYTAKRRGFYHTSFSVDTMLYILGRSRKFDKIWDVLLDVKFKDPSLISLR 145
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++ ++L RI+K S +T+E+F + ++ + +F FN LL+ C +K M +AR+V
Sbjct: 146 TVMVVLGRIAKVCSVRQTVESFRKFKK----FVPEFDVTCFNALLRTLCQEKSMMDARNV 201
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ L S F PN +T NILL G+K S + E F+ EM+ G +P VV+YN +D YCK
Sbjct: 202 YHGLKSMFRPNLQTFNILLSGWKSSEEA---EGFFDEMIEMGVKPDVVSYNCLVDVYCKN 258
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
A ++ +M + T T++I G GLV +AR + EM + PD+ AY
Sbjct: 259 REMDKAFKVVGKMRDEDIPADVITYTSIIGGLGLVGQPDKARNILKEMKEYGCYPDVAAY 318
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA I + + L+ A +L+DEM K + + TY+ F S+ L+ LY RM++
Sbjct: 319 NATIRNFCIAKRLHEAFDLLDEMVNKGLSPNATTYNLFFRIFFWSNDLQSAWNLYRRMMD 378
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T++ + L++ F + ++ L LW +I +GF + + L LC G+ E
Sbjct: 379 TGCLPNTQSCLFLVRLFKKYEKEEMALELWNDMIQKGFGSYILVSEELFDLLCDLGKLIE 438
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQ 497
A C QM+ + + S S++ ++ + AN +E L++L + + ++ + P +Q
Sbjct: 439 AESCFLQMVDKGHKPSYTSFKRIKVLMELANKHEALQNLSKKMDDIFWIKKMPPLEQ 495
>gi|356499705|ref|XP_003518677.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Glycine max]
Length = 500
Score = 238 bits (606), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 141/455 (30%), Positives = 246/455 (54%), Gaps = 13/455 (2%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTP-LSSTLVENVLGRLFAAHSNGL 84
++ Q+ +++++ I++ P+Q L Q L + LS+ +++ VL R+ +H N
Sbjct: 27 SSNQNDDVQKVFGILSSTSTPEQ-----LKQSLKSSGVFLSNDVIDQVLKRVRFSHGNPS 81
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+ LEFF++T + F + + + L+IL R R F Q WEL+ +R + +T +++ +
Sbjct: 82 QTLEFFRYTGRRKGFYHSSFSLDTMLYILGRSRMFGQVWELLIEARRKDQTAITARTVMV 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L RI+K S +T+E+F + + + ++F + FN LL+ C +K M +AR+V+ L
Sbjct: 142 VLGRIAKVCSVRQTVESFRKFRKLV----QEFDTNCFNALLRTLCQEKSMADARNVYHSL 197
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF PN +T NILL G+K D ++F+ EM G P VVTYN +D YCK
Sbjct: 198 KHRFRPNLQTFNILLSGWKTPEDA---DLFFKEMKEMGVTPDVVTYNSLMDVYCKGREIE 254
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A ++ +EM P + T T +I G GL+ +AR + EM + PD AYNA I
Sbjct: 255 KAYKMLDEMRDQDFSPDVITYTCIIGGLGLIGQPDKARNVLKEMKEYGCYPDAAAYNAAI 314
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + L A L++EM K + + TY+ F S+ L+ +Y RM+ +
Sbjct: 315 RNFCIAKRLGDAHGLVEEMVTKGLSPNATTYNLFFRVFYWSNDLQSSWNMYQRMMVEGCL 374
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T++ + L++ F + +V++ L WG ++++GF + D+L LC G+ EEA +C
Sbjct: 375 PNTQSCMFLIRLFRRHEKVEMALQFWGDMVEKGFGSYTLVSDVLFDLLCDMGKLEEAEKC 434
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+M+ + ++ S S+R ++ + AN +E L+ L
Sbjct: 435 FLEMVEKGQKPSHVSFRRIKVLMELANRHEALQSL 469
>gi|297843042|ref|XP_002889402.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
gi|297335244|gb|EFH65661.1| hypothetical protein ARALYDRAFT_470202 [Arabidopsis lyrata subsp.
lyrata]
Length = 490
Score = 213 bits (541), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 136/416 (32%), Positives = 233/416 (56%), Gaps = 6/416 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L++ VL R+ +H N ++ LEF+++ F + + + L+IL R R FDQ W
Sbjct: 68 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYAGARRGFYHSSFSLDTMLYILGRNRKFDQIW 127
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
E++ +R SL++ ++M ++L R++K S +T+E+F + +R + F + FN
Sbjct: 128 EILIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLV---PDFFDTACFNA 184
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL+ C +K M +AR+V+ L +F P+ +T NILL G+K S E F+ EM +G
Sbjct: 185 LLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSS---EEAEAFFEEMKGKGL 241
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+P VVTYN ID YCK A +L ++M P + T TT+I G GL+ +AR+
Sbjct: 242 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEDETPDVITYTTIIGGLGLIGQPDKARE 301
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ EM + PD+ AYNA I + R L A +L+DEM +K + + TY+ F L
Sbjct: 302 VLKEMKEYGCYPDVAAYNAAIRNYCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 361
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
++ L +LY+RM+ +P T++ + L+K F + +VD+ + LW ++ +GF +
Sbjct: 362 LANDLGRSWELYERMLGNGCLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSL 421
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L+ LC + EEA +C +M+ + + S S++ ++ + AN ++++ +L
Sbjct: 422 VSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 477
>gi|9857539|gb|AAG00894.1|AC064879_12 Hypothetical protein [Arabidopsis thaliana]
Length = 490
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 233/416 (56%), Gaps = 6/416 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L++ VL R+ +H N ++ LEF+++ F + + + L+IL R R FDQ W
Sbjct: 68 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIW 127
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
EL+ +R SL++ ++M ++L R++K S +T+E+F + +R + F + FN
Sbjct: 128 ELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLV---PDFFDTACFNA 184
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL+ C +K M +AR+V+ L +F P+ +T NILL G+K S E F+ EM +G
Sbjct: 185 LLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSS---EEAEAFFEEMKGKGL 241
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+P VVTYN ID YCK A +L ++M P + T TT+I G GL+ +AR+
Sbjct: 242 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 301
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ EM + PD+ AYNA I + R L A +L+DEM +K + + TY+ F L
Sbjct: 302 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 361
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
++ L +LY RM+ + +P T++ + L+K F + +VD+ + LW ++ +GF +
Sbjct: 362 LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSL 421
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L+ LC + EEA +C +M+ + + S S++ ++ + AN ++++ +L
Sbjct: 422 VSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 477
>gi|15217756|ref|NP_171744.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806504|sp|Q9FZ19.2|PPR5_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g02420
gi|332189307|gb|AEE27428.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 491
Score = 212 bits (540), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 233/416 (56%), Gaps = 6/416 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L++ VL R+ +H N ++ LEF+++ F + + + L+IL R R FDQ W
Sbjct: 69 LSKDLIDRVLKRVRFSHGNPIQTLEFYRYASAIRGFYHSSFSLDTMLYILGRNRKFDQIW 128
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
EL+ +R SL++ ++M ++L R++K S +T+E+F + +R + F + FN
Sbjct: 129 ELLIETKRKDRSLISPRTMQVVLGRVAKLCSVRQTVESFWKFKRLV---PDFFDTACFNA 185
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL+ C +K M +AR+V+ L +F P+ +T NILL G+K S E F+ EM +G
Sbjct: 186 LLRTLCQEKSMTDARNVYHSLKHQFQPDLQTFNILLSGWKSS---EEAEAFFEEMKGKGL 242
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+P VVTYN ID YCK A +L ++M P + T TT+I G GL+ +AR+
Sbjct: 243 KPDVVTYNSLIDVYCKDREIEKAYKLIDKMREEEETPDVITYTTVIGGLGLIGQPDKARE 302
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ EM + PD+ AYNA I + R L A +L+DEM +K + + TY+ F L
Sbjct: 303 VLKEMKEYGCYPDVAAYNAAIRNFCIARRLGDADKLVDEMVKKGLSPNATTYNLFFRVLS 362
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
++ L +LY RM+ + +P T++ + L+K F + +VD+ + LW ++ +GF +
Sbjct: 363 LANDLGRSWELYVRMLGNECLPNTQSCMFLIKMFKRHEKVDMAMRLWEDMVVKGFGSYSL 422
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L+ LC + EEA +C +M+ + + S S++ ++ + AN ++++ +L
Sbjct: 423 VSDVLLDLLCDLAKVEEAEKCLLEMVEKGHRPSNVSFKRIKLLMELANKHDEVNNL 478
>gi|115451461|ref|NP_001049331.1| Os03g0208600 [Oryza sativa Japonica Group]
gi|26006498|gb|AAN77307.1| Hypothetical protein [Oryza sativa Japonica Group]
gi|108706773|gb|ABF94568.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113547802|dbj|BAF11245.1| Os03g0208600 [Oryza sativa Japonica Group]
Length = 531
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 11/437 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S+ L++ VL R AH + L+AL L P+P A + L++L R R F W
Sbjct: 71 ISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTALYVLGRARRFAHMW 130
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
+L+ +R P +T ++ ++L R++K S ET+++F R+ R + R G ++
Sbjct: 131 DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML----RGRGDDQEGQ 186
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL+ C +K M +AR+V+ L F N +T NILL G+K + D E F EM
Sbjct: 187 LFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDA---EAFVAEMR 243
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTYN ID +CK +A +L +EM P + T T+LI G GL+
Sbjct: 244 ELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPD 303
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM + PD+ AYN I + + + L A LM+EM K + + TY+ F
Sbjct: 304 KAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFF 363
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ + +LY+RM P T++ + +++ + RV L LW +++ GF
Sbjct: 364 RCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFG 423
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L LC G+ +EA C QM+ ++ S ++R ++ + AN E + L
Sbjct: 424 SFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIARL 483
Query: 480 DRMIKNLQAVLPPPTRQ 496
+ + P R+
Sbjct: 484 TAQMAQFGRLAPEDCRR 500
>gi|125542844|gb|EAY88983.1| hypothetical protein OsI_10467 [Oryza sativa Indica Group]
Length = 525
Score = 201 bits (512), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 133/437 (30%), Positives = 216/437 (49%), Gaps = 11/437 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S+ L++ VL R AH + L+AL L P+P A + L++L R R F W
Sbjct: 65 ISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTALYVLGRARRFAHMW 124
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
+L+ +R P +T ++ ++L R++K S ET+++F R+ R + R G ++
Sbjct: 125 DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML----RGRGDDQEGQ 180
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL+ C +K M +AR+V+ L F N +T NILL G+K + D E F EM
Sbjct: 181 LFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDA---EAFVAEMR 237
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTYN ID +CK +A +L +EM P + T T+LI G GL+
Sbjct: 238 ELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPD 297
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM + PD+ AYN I + + + L A LM+EM K + + TY+ F
Sbjct: 298 KAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFF 357
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ + +LY+RM P T++ + +++ + RV L LW +++ GF
Sbjct: 358 RCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFG 417
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L LC G+ +EA C QM+ ++ S ++R ++ + AN E + L
Sbjct: 418 SFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIARL 477
Query: 480 DRMIKNLQAVLPPPTRQ 496
+ + P R+
Sbjct: 478 TAQMAQFGRLAPEDCRR 494
>gi|222624423|gb|EEE58555.1| hypothetical protein OsJ_09859 [Oryza sativa Japonica Group]
Length = 858
Score = 200 bits (509), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 131/420 (31%), Positives = 211/420 (50%), Gaps = 11/420 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S+ L++ VL R AH + L+AL L P+P A + L++L R R F W
Sbjct: 71 ISAPLLDLVLRRFRFAHGDPLRALSLLSLALDRHGVAPSPFALDTALYVLGRARRFAHMW 130
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
+L+ +R P +T ++ ++L R++K S ET+++F R+ R + R G ++
Sbjct: 131 DLLRSSRRLVPDAVTPRTAMVVLGRVAKVCSVRETVDSFRRLSRML----RGRGDDQEGQ 186
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL+ C +K M +AR+V+ L F N +T NILL G+K + D E F EM
Sbjct: 187 LFNALLRTLCQEKSMSDARNVYHALKYEFKVNRQTFNILLSGWKSAEDA---EAFVAEMR 243
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTYN ID +CK +A +L +EM P + T T+LI G GL+
Sbjct: 244 ELGVEPDLVTYNSLIDCHCKNRGVENAYKLLDEMREKDISPDVITYTSLIGGLGLIGQPD 303
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM + PD+ AYN I + + + L A LM+EM K + + TY+ F
Sbjct: 304 KAKHLLKEMHELGCYPDVPAYNTAIRNFVIAKRLGDAFALMEEMASKGLMPNATTYNLFF 363
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ + +LY+RM P T++ + +++ + RV L LW +++ GF
Sbjct: 364 RCYYWAYDIGSAWQLYERMRSEGCFPNTQSCMFIVRLCHRHGRVAQALELWSDMVNNGFG 423
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L LC G+ +EA C QM+ ++ S ++R ++ + AN E + L
Sbjct: 424 SFTLVSDVLFDLLCDEGKLDEAERCFHQMIELGQKPSNVAFRRIKILMQLANREESIARL 483
>gi|242041823|ref|XP_002468306.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
gi|241922160|gb|EER95304.1| hypothetical protein SORBIDRAFT_01g043390 [Sorghum bicolor]
Length = 519
Score = 198 bits (503), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 133/432 (30%), Positives = 207/432 (47%), Gaps = 6/432 (1%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
PLSS L++ V+ R AH + L+AL P+P A + L++L R R F
Sbjct: 67 SAVPLSSPLLDAVMRRFRFAHGDPLRALSLLSLAADRGGVAPSPYAIDTALYVLGRARRF 126
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
W+L++ +R P +T ++ I+L R++K S ET+ +F R+ R +F + +
Sbjct: 127 PHMWDLLATTRRICPDAVTSRTAMIVLGRVAKVCSVHETVASFRRLAR-MFHAVDP--AC 183
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL+ C +K M +AR+VF L F N T NILL G+K + D E F EM
Sbjct: 184 LFNALLRTLCQEKSMSDARNVFHALKYDFRVNRHTFNILLSGWKSAEDA---EAFVAEMR 240
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTYN ID +CK A +L +EM P + T T+LI G GL+
Sbjct: 241 ELGVEPDLVTYNSLIDCHCKNRDVEKAYKLLDEMREKDISPDIITYTSLIGGLGLIGQPD 300
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR L EM + PD+ AYNA I + + + L A LMD+M K + + TY+ F
Sbjct: 301 KARDLLKEMHELGCSPDVPAYNAAIRNFVIAKRLGDAFALMDQMASKGLMPNPTTYNLFF 360
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ + +LY+RM P T++ + +++ +V L LW ++ F
Sbjct: 361 RCYYWAFDIGSTWRLYERMRSEGCFPNTQSCMFIIRLCHRYGKVGQALELWSDMVSNRFG 420
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
D+L LC G+ EE C QM+ ++ S ++R ++ + A E + L
Sbjct: 421 SFTLVSDVLFDLLCDEGKLEEVERCFCQMVEFGQKPSNVAFRRIKILMQVAKQEESIARL 480
Query: 480 DRMIKNLQAVLP 491
+ + P
Sbjct: 481 TEKMAQFGRLAP 492
>gi|357113487|ref|XP_003558534.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g02420-like [Brachypodium distachyon]
Length = 520
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 137/466 (29%), Positives = 222/466 (47%), Gaps = 11/466 (2%)
Query: 28 TQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTP--LSSTLVENVLGRLFAAHSNGLK 85
++ + + RI+ P P+ ++ T+ LS+ L++ VL R AH + L+
Sbjct: 36 ASDADADSVYRIVTGAP------TPSAMESALSTSSILLSAPLLDLVLSRFRFAHGDPLR 89
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL + P+P + +++L R R F W+L+ R P +T ++ ++
Sbjct: 90 ALSLLSLAVDRCGVAPSPFTLDTAIYVLGRARRFTHMWDLVHSYHRLCPDAVTARTAMVV 149
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L R++K S ET+ +F R+ R ++ FN LL+ C +K M +AR+VF
Sbjct: 150 LGRVAKICSVRETVASFRRLLRLFRGREGTESADLFNALLRTLCQEKSMSDARNVFHAHK 209
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
F N +T NILL G+K S D E F+ EM G P +VTYN ID CK
Sbjct: 210 YEFQVNRQTFNILLSGWKTSEDA---EAFFAEMRELGIDPDLVTYNSLIDCQCKNRDVEK 266
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A +L +EM P + T T+LI G GL+ +AR L EM + PD+ AYNA I
Sbjct: 267 AYKLLDEMREKEISPDVITYTSLIGGLGLIGQPDKARHLLKEMCELGCHPDVPAYNATIR 326
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ + + L A LMDEM K + + TY+ F + + LY+RM + P
Sbjct: 327 NFVIAKRLGDAFALMDEMASKGLMPNATTYNLFFRFYYWAYDIGSAWLLYERMRSERCFP 386
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T++ + +++ + +V L LW ++ GF D+L LC G+ EEA C
Sbjct: 387 NTQSCMFIVRLCHRHGKVMQALELWSDMVGNGFGSFTLVSDVLFDLLCDEGKLEEAERCF 446
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
QM+ ++ S ++R ++ + AN E + L+ + ++P
Sbjct: 447 HQMVELGQKPSSVAFRRIKILMQLANREESISKLNEKMARFGHLVP 492
>gi|242092396|ref|XP_002436688.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
gi|241914911|gb|EER88055.1| hypothetical protein SORBIDRAFT_10g007070 [Sorghum bicolor]
Length = 551
Score = 197 bits (500), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 130/468 (27%), Positives = 230/468 (49%), Gaps = 19/468 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S + + RI++ P +P + L L +S LV VL L A G+ AL F
Sbjct: 100 SEAAKMVCRIVSTQP---EPRIASTLDAL--GVAMSPELVAEVLKNLSNA---GMLALAF 151
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F+ T + F + L +++ F W L+ ++ LL+ + +++ R
Sbjct: 152 FRWAERQEGFSYTAEGFHNLIEALGKIKQFKLVWSLVETMRCR--GLLSKDTFKLIVRRY 209
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M IF G++ S+ +N L+ K++K+A++++ +K +
Sbjct: 210 ARARKVKEAVETFEKMS--IF-GLKTELSD-YNWLIDTLSKSKQVKKAQAIYKEMKRKGK 265
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G RP VV Y + I +CK G +A+
Sbjct: 266 FVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAI 325
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + +A + F++ K ++ NA++ +
Sbjct: 326 KVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEQYKKSGFPMEVPTCNAVVGAY 385
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R A +++DEM E +IG ++ TY + L+KS E ++ RM P+
Sbjct: 386 CRASKFEHAFKMVDEMRECKIGPNSRTYDVILHYLIKSQKFEEAYNVFQRMGMDGCEPQL 445
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ LN+W + +RG P H L+ GLC R EEA ++
Sbjct: 446 NTYTMMVGMFCSNGRVDMALNVWKQMGERGVLPCMHMFSALINGLCFENRLEEACVYFQE 505
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
ML + + + L+ LV+ ++ M L A+ P R
Sbjct: 506 MLDKGIRPPGQLFSNLKEALVEGG---RISLAQEMASKLDAIRKTPFR 550
>gi|297846942|ref|XP_002891352.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337194|gb|EFH67611.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 207
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 137/230 (59%), Gaps = 32/230 (13%)
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E M+R ++Q +TTLIHG+G+ RN + RQ
Sbjct: 8 EHMDRRDFDITVQILTTLIHGSGVARNKIKTRQF-------------------------- 41
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS--GLEGVCKLYDRMIEGKFVPKTR 388
A+++M EMEEK I D+VT+H+MF G+MKS G GVC+ Y +M E VPKT
Sbjct: 42 ----GAIKVMKEMEEKGIEPDSVTFHSMFIGMMKSKEFGFNGVCEYYHKMKERCLVPKTP 97
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
TVVMLMK FC N V+LGL+LW Y+++RG+CPHG AL+LL T LC+R R +AFECS+Q
Sbjct: 98 TVVMLMKLFCQNGEVNLGLDLWKYMLERGYCPHGQALELLTTALCARRRGNDAFECSRQT 157
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
+ R R VSE YRML+ L N +KLE+L I+ L + LPPP Q +
Sbjct: 158 VERGRCVSEPVYRMLETSLSSNNELKKLEELKGKIQKLHSFLPPPGTQLI 207
>gi|326524964|dbj|BAK04418.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 565
Score = 191 bits (486), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 128/462 (27%), Positives = 224/462 (48%), Gaps = 20/462 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S E ER+ R+++ P +P P L L + +S LV VL L A G+ AL F
Sbjct: 114 SEEAERVCRVLSTLP---EPRVPAALDALGAS--VSPQLVAEVLKNLSNA---GILALAF 165
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F T D+F + L +++ F W L+ ++ LL+ + +++ R
Sbjct: 166 FRWAERQQGFVYTADSFHNLIEALGKIKQFRLVWSLVEAMRCR--GLLSKDTFRLIVRRY 223
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M G+ K ++N L+ K++K+A ++F +K R
Sbjct: 224 ARARKVKEAVETFEKMAG---FGL-KADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGR 279
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G +P VV Y + I +CK G +A+
Sbjct: 280 FVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGLQPDVVAYGMLISSFCKSGKCDEAI 339
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + +A + F+ ++ NA++ +
Sbjct: 340 KVFREMETNGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAY 399
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R A +++DEM + IG ++ TY + L+KS +E ++ M + P+
Sbjct: 400 CRSSKFQHAFKMVDEMRKSGIGPNSRTYDIILHHLIKSQKIEEAYNVFQGMSKDGCEPQL 459
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ L +W + ++G P H L+ GLC R EEA ++
Sbjct: 460 NTYTMMVGMFCSNERVDVALKVWNQMKEKGVLPCMHMFSALINGLCFENRLEEACAYFQE 519
Query: 448 MLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDRMIKN 485
ML R + + L+ L++ A E LD + K
Sbjct: 520 MLDRGIRPPGQLFSNLKEALIEGGRISLAQEMALKLDELRKT 561
>gi|259490380|ref|NP_001159198.1| uncharacterized protein LOC100304284 [Zea mays]
gi|223942589|gb|ACN25378.1| unknown [Zea mays]
gi|414865313|tpg|DAA43870.1| TPA: hypothetical protein ZEAMMB73_208601 [Zea mays]
Length = 519
Score = 191 bits (485), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 143/473 (30%), Positives = 228/473 (48%), Gaps = 13/473 (2%)
Query: 27 TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA 86
T +++ + RI+ P + L LSS L++ V+ R AH + L+A
Sbjct: 37 TASDADVGEVYRIVTSAATPSA-MESALAA---SAVSLSSPLLDAVMRRFRFAHGDPLRA 92
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIML 146
L P+P A + L++L R R F W L+++ +R P LT ++ I+L
Sbjct: 93 LSLLSLAADRGGIAPSPYAIDTALYVLGRARRFPHMWNLVANTRRICPDALTPRTAMIVL 152
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
R++K S ET+ +F + R +F + + FN LL+ C +K M +AR+VF L
Sbjct: 153 GRVAKVCSVRETVASFRCLAR-LFHTVDP--AVLFNALLRTLCQEKSMSDARNVFHALKY 209
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
F N T NILL G+K + D E F EM G P +VTYN ID +CK A
Sbjct: 210 EFRVNRHTFNILLSGWKSAEDA---EAFVTEMRELGVEPDLVTYNSLIDCHCKNRDVQKA 266
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+L +EM P + T T+LI G GL+ +A+ L EM + PD+ AYNA I +
Sbjct: 267 YKLLDEMRHKDISPDIITYTSLIGGLGLIGQPDKAKDLLKEMYELGCYPDVPAYNAAIRN 326
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ + L A LMD+M K + + TY+ F + + +LY+RM P
Sbjct: 327 FVIAKRLGDAFALMDQMVSKGLMPNPTTYNLFFRCYYWAFDIGSAWRLYERMRSEGCYPN 386
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T++ + +++ +V L L LW ++ F D+L+ LC G+ E+A C
Sbjct: 387 TQSCMFIIRLCHRYGKVALALELWSDMVSSSFGSLTLVSDVLLDLLCDEGKLEDAERCFC 446
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLPPPTRQQV 498
QM+ ++ S ++R ++ + A E + L ++MI+ + LPP Q+V
Sbjct: 447 QMVELGQKPSNVAFRRIKILMQLAKQEESIARLTEKMIQFGR--LPPVDCQRV 497
>gi|226505250|ref|NP_001147833.1| GTP binding protein [Zea mays]
gi|195614010|gb|ACG28835.1| GTP binding protein [Zea mays]
gi|413952711|gb|AFW85360.1| GTP binding protein [Zea mays]
Length = 547
Score = 189 bits (480), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 122/444 (27%), Positives = 220/444 (49%), Gaps = 16/444 (3%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S + + RI++ P +P + L L +S LV VL L A G+ AL F
Sbjct: 96 SEAAKMVCRIVSTQP---EPKIASTLDAL--GVAVSPELVAEVLKNLSNA---GMLALAF 147
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F+ T + F + L +++ F W L+ ++ LL+ + +++ R
Sbjct: 148 FRWAERQEGFSYTAEGFHNLIEALGKIKQFRLVWSLVETMRCR--GLLSKDTFKLIVRRY 205
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M IF G++ S+ +N L+ K++K+A++++ +K +
Sbjct: 206 ARARKVKEAVETFEKMS--IF-GLKTELSD-YNWLIDTLSKSKQVKKAQAIYKEMKRKGK 261
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G RP VV Y + I +CK G +A+
Sbjct: 262 FVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGKCDEAI 321
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + +A + F+ K ++ NA++ +
Sbjct: 322 KVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNAVVGAY 381
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R A +++DEM + ++G ++ TY + L+KS E ++ RM P+
Sbjct: 382 CRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGIDGCEPQL 441
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ L +W + ++G P H L+ GLC R EEA ++
Sbjct: 442 NTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEEACVYFQE 501
Query: 448 MLVRRRQVSEASYRMLQRYLVQAN 471
ML + + + L+ LVQ
Sbjct: 502 MLDKGIRPPGQLFSNLKEALVQGG 525
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/167 (19%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N ++ A+C + + A + ++ + PN++T +++L +S + M +
Sbjct: 375 NAVVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNIFQRMGI 434
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P + TY + + +C G A++++++M LP + + LI+G + +
Sbjct: 435 DGCEPQLNTYTMMVGMFCSNGRVDMALKVWKQMGEKGVLPCMHMFSALINGLCFENRLEE 494
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
A F EM + ++P ++ + +L++ ++ A E+ +++ R
Sbjct: 495 ACVYFQEMLDKGIRPPGQLFSNLKEALVQGGRISLAQEVALKLDAIR 541
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/232 (18%), Positives = 92/232 (39%), Gaps = 1/232 (0%)
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+ + + Y + +A+ FE+M L LI + + +A+ ++ EM
Sbjct: 197 TFKLIVRRYARARKVKEAVETFEKMSIFGLKTELSDYNWLIDTLSKSKQVKKAQAIYKEM 256
Query: 309 PKRN-LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
++ PD+ Y ++ +DL + EM + I D V Y + KS
Sbjct: 257 KRKGKFVPDLKTYTVLMEGWGHEKDLLMVKTMYQEMIDAGIRPDVVAYGMLISAFCKSGK 316
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ K++ M +P ML+ R+D L + + GF +
Sbjct: 317 CDEAIKVFYEMEASGCMPSPHVYCMLINGLGSEERLDEALKYFEHYKKSGFPMEVPTCNA 376
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+V C +++ AF+ +M + + +Y ++ YL+++ E+ ++
Sbjct: 377 VVGAYCRASKFQHAFKMVDEMRKCKVGPNSRTYDVILHYLIKSQKFEEAYNI 428
>gi|115436822|ref|NP_001043145.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|56201654|dbj|BAD73118.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113532676|dbj|BAF05059.1| Os01g0505500 [Oryza sativa Japonica Group]
gi|125570544|gb|EAZ12059.1| hypothetical protein OsJ_01942 [Oryza sativa Japonica Group]
Length = 540
Score = 187 bits (476), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 16/422 (3%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S ER+ R+++ P + + P +L L T +S LV VL L A G+ AL F
Sbjct: 89 SEAAERVCRVVSAQP--EHRIAP-VLDALGVT--VSPQLVAEVLKNLSNA---GILALAF 140
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F + + F + L +++ F W L+ ++ S L+ + I++ R
Sbjct: 141 FRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCR--SCLSKDTFKIIVRRY 198
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M G+ K ++N L+ K++K+A ++F +K R
Sbjct: 199 ARARKVKEAVETFEKMSS---FGL-KTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGR 254
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G +P VV Y + I +CK G +A+
Sbjct: 255 FIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAI 314
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + + +A + F + ++ NA+I +
Sbjct: 315 KVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAY 374
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + + A +++DEM + IG + TY + L+KS +E L+ RM P+
Sbjct: 375 CRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPEL 434
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ L +W + ++G P H L+ GLC R EEA ++
Sbjct: 435 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFENRLEEACVYFQE 494
Query: 448 ML 449
ML
Sbjct: 495 ML 496
>gi|125526112|gb|EAY74226.1| hypothetical protein OsI_02107 [Oryza sativa Indica Group]
Length = 540
Score = 187 bits (474), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 121/422 (28%), Positives = 211/422 (50%), Gaps = 16/422 (3%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S ER+ R+++ P + + P +L L T +S LV VL L A G+ AL F
Sbjct: 89 SEAAERVCRVVSAQP--EHRIAP-VLDALGVT--VSPQLVAEVLKNLSNA---GILALAF 140
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F + + F + L +++ F W L+ ++ S L+ + I++ R
Sbjct: 141 FRWAERQQGFRYSAEGFHNLIEALGKIKQFRLVWSLVEAMRCR--SCLSKDTFKIIVRRY 198
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M G+ K ++N L+ K++K+A ++F +K R
Sbjct: 199 ARARKVKEAVETFEKMSS---FGL-KTDLSDYNWLIDILSKSKQVKKAHAIFKEMKRKGR 254
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G +P VV Y + I +CK G +A+
Sbjct: 255 FIPDLKTYTVLMEGWGHEKDLLMLKAVYQEMLDAGIKPDVVAYGMLISAFCKSGKCDEAI 314
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + + +A + F + ++ NA+I +
Sbjct: 315 KVFHEMEESGCMPSPHVYCMLINGLGSMERLDEALKYFQLSKESGFPMEVPTCNAVIGAY 374
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + + A +++DEM + IG + TY + L+KS +E L+ RM P+
Sbjct: 375 CRALEFHHAFKMVDEMRKSGIGPNTRTYDIILNHLIKSEKIEEAYNLFQRMERDGCEPEL 434
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ L +W + ++G P H L+ GLC R EEA ++
Sbjct: 435 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSALINGLCFDNRLEEACVYFQE 494
Query: 448 ML 449
ML
Sbjct: 495 ML 496
>gi|449503427|ref|XP_004161997.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g71060, mitochondrial-like [Cucumis sativus]
Length = 542
Score = 186 bits (473), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 16/422 (3%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+ + E+ ++I+ +P +LL P LS L+ VL +L A G AL F
Sbjct: 91 AQDAEKFCKLISKNP---NSCIESLLDGAPME--LSPALIVEVLKKLSNA---GFLALSF 142
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F T +++ + L +++ F+ W L+S ++R +L+ ++ +++ R
Sbjct: 143 FRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK--GILSRETFALITRRY 200
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRF 208
++ + +E +E+F++ME+ F + G +FN LL C + +K+A+ VF K+ RF
Sbjct: 201 ARARKVKEAVESFEKMEKFGF----QMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ K+ ILL G+ + ++ + Y EM GF P VVT+ I I+ +CK + +A+R
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF EME PS TLI+G G + + +A + F+++ P+ YNA++ +
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKT 387
+ A ++DEM + +G ++ TY + L+K + ++ RM E P
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T ++++ FC RVD+ + +W + +G P H L+ LC + E+A ++
Sbjct: 437 STYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQE 496
Query: 448 ML 449
ML
Sbjct: 497 ML 498
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 19/238 (7%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ FE+ME+ + L+ RN+ +A+++FD+M KPDI +Y ++
Sbjct: 208 EAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILL 267
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++L E+ EM ++ D VT+ + K+ + +L+ M
Sbjct: 268 EGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIK 327
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P L+ R+ L + L GF P + +V C + A+
Sbjct: 328 PSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM 387
Query: 445 SKQM------------------LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+M L++ R+ EA Y + QR + L D MI+
Sbjct: 388 VDEMRKSGVGPNSRTYDIILHHLIKGRKSKEA-YSVFQRMSREPGCEPTLSTYDIMIR 444
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--P 134
+ N LK E ++ ++ F P F ++ + R +D+A L ++ + P
Sbjct: 270 WGQDQNLLKLNEVYR-EMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
S +++ + + +E LE F++++ F + +N ++ A+C +M
Sbjct: 329 SPHVF---CTLINGLGSEKRLKEALEFFEQLKLSGFAP----EAPTYNAVVGAYCWSMKM 381
Query: 195 KEA-RSVFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
A R V S PN++T +I+L K A +F G P++ TY+I
Sbjct: 382 AYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDI 441
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I +C + A+++++EM+ LP + +TLI+ + A F EM
Sbjct: 442 MIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG 501
Query: 313 LKPDIGAYNAMISSLI 328
++P ++ + +L+
Sbjct: 502 IRPPATMFSNLKQALL 517
>gi|449465535|ref|XP_004150483.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Cucumis sativus]
Length = 542
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 16/422 (3%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+ + E+ ++I+ +P +LL P LS L+ VL +L A G AL F
Sbjct: 91 AQDAEKFCKLISKNP---NSCIESLLDGAPME--LSPALIVEVLKKLSNA---GFLALSF 142
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F T +++ + L +++ F+ W L+S ++R +L+ ++ +++ R
Sbjct: 143 FRWAEKQKGFKHTTESYNLLIEALGKIKQFNVIWNLVSDMKRK--GILSRETFALITRRY 200
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRF 208
++ + +E +E+F++ME+ F + G +FN LL C + +K+A+ VF K+ RF
Sbjct: 201 ARARKVKEAVESFEKMEKFGF----QMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRF 256
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ K+ ILL G+ + ++ + Y EM GF P VVT+ I I+ +CK + +A+R
Sbjct: 257 KPDIKSYTILLEGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIR 316
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF EME PS TLI+G G + + +A + F+++ P+ YNA++ +
Sbjct: 317 LFHEMEAKNIKPSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYC 376
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKT 387
+ A ++DEM + +G ++ TY + L+K + ++ RM E P
Sbjct: 377 WSMKMAYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTL 436
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T ++++ FC RVD+ + +W + +G P H L+ LC + E+A ++
Sbjct: 437 STYDIMIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQE 496
Query: 448 ML 449
ML
Sbjct: 497 ML 498
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/238 (21%), Positives = 91/238 (38%), Gaps = 19/238 (7%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ FE+ME+ + L+ RN+ +A+++FD+M KPDI +Y ++
Sbjct: 208 EAVESFEKMEKFGFQMGVSDFNRLLDTLCKSRNVKKAQEVFDKMKHGRFKPDIKSYTILL 267
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++L E+ EM ++ D VT+ + K+ + +L+ M
Sbjct: 268 EGWGQDQNLLKLNEVYREMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIK 327
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P L+ R+ L + L GF P + +V C + A+
Sbjct: 328 PSPHVFCTLINGLGSEKRLKEALEFFEQLKLSGFAPEAPTYNAVVGAYCWSMKMAYAYRM 387
Query: 445 SKQM------------------LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+M L++ R+ EA Y + QR + L D MI+
Sbjct: 388 VDEMRKSGVGPNSRTYDIILHHLIKGRKSKEA-YSVFQRMSREPGCEPTLSTYDIMIR 444
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 111/256 (43%), Gaps = 12/256 (4%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--P 134
+ N LK E ++ ++ F P F ++ + R +D+A L ++ + P
Sbjct: 270 WGQDQNLLKLNEVYR-EMRDEGFEPDVVTFGILINAHCKARKYDEAIRLFHEMEAKNIKP 328
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
S +++ + + +E LE F++++ F + +N ++ A+C +M
Sbjct: 329 SPHVF---CTLINGLGSEKRLKEALEFFEQLKLSGFAP----EAPTYNAVVGAYCWSMKM 381
Query: 195 KEA-RSVFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
A R V S PN++T +I+L K A +F G P++ TY+I
Sbjct: 382 AYAYRMVDEMRKSGVGPNSRTYDIILHHLIKGRKSKEAYSVFQRMSREPGCEPTLSTYDI 441
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I +C + A+++++EM+ LP + +TLI+ + A F EM
Sbjct: 442 MIRMFCNEERVDMAIQIWDEMKAKGVLPGMHLFSTLINSLCHEHKLEDACTYFQEMLDVG 501
Query: 313 LKPDIGAYNAMISSLI 328
++P ++ + +L+
Sbjct: 502 IRPPATMFSNLKQALL 517
>gi|255558584|ref|XP_002520317.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540536|gb|EEF42103.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 439
Score = 186 bits (472), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 119/441 (26%), Positives = 216/441 (48%), Gaps = 13/441 (2%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P LH L Q+ + +P +VE+VL R A G+ A FF++ + H+T + A
Sbjct: 5 PAVTLHTALDQNGIRVSP---EIVEDVLRRFENA---GMVAYRFFEWAEKQLHYTHSVRA 58
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ + LA++R + W+L++ ++R +L +++ I++ + ++ Q EE + F+ M
Sbjct: 59 YHTMIESLAKIRQYQIMWDLINAMKRKR--MLNVETFCIIMRKYARAQKLEEAVYTFNVM 116
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES 225
E+ FN L A C K +++A+ +F RF P++KT ILL G+ ++
Sbjct: 117 EKYDVPP----NLAAFNGLFSALCKSKNVRKAQEIFDSSKDRFVPDSKTYTILLEGWGKT 172
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
++ + EMV G P +VTY I +D CK G +A+ + +EM+ C P+
Sbjct: 173 PNLPKAREIFREMVDVGCSPDIVTYGIMVDILCKAGRVDEALDIVKEMDLTICKPTSFIY 232
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+ LIH G+ I A F M K +K D+ AYNA+I + + +++EM+
Sbjct: 233 SVLIHTYGIENRIEDAVDTFLGMEKNGVKADVAAYNALIGAFCKVNKFKNVYRVLNEMDY 292
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K + ++ T + + L+ + +++ RMI+ P T M++K FC +++
Sbjct: 293 KGMQPNSRTLNIILNNLIARGETDEAFRVFRRMIK-VCEPDADTYTMMIKMFCERNELEM 351
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L +W Y+ + F P H +L+ GLC G A + M+ + + S ++ L+
Sbjct: 352 ALKVWKYMKKKHFVPSMHTFSVLINGLCEEGDVSHACVMLEDMIEKGIRPSGVTFGRLRH 411
Query: 466 YLVQANANEKLEDLDRMIKNL 486
L++ + LE L + I L
Sbjct: 412 LLIKEGREDVLEFLQQKINVL 432
>gi|359492357|ref|XP_002284592.2| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 476
Score = 183 bits (464), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 222/432 (51%), Gaps = 13/432 (3%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P L +L + + +P+ +VENVL R A G+ A +FF++ + ++T + A
Sbjct: 26 PKLELDTSLSESGIRVSPI---VVENVLKRFENA---GMLAYQFFEWAGKQRNYTHSIRA 79
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ + LA++R + W+L++ ++ +L +++ I++ + ++ Q +E + F+ M
Sbjct: 80 YHTMIESLAKIRQYQIMWDLVNKMRSLK--ILNVETFCIIMRKYARSQKVKEAVYTFNIM 137
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES 225
E+ FN LL A C K + +A+ +F + +F P++KT +ILL G+ ++
Sbjct: 138 EKYDVPP----NLAAFNSLLSALCKSKNVVKAQEIFNGMKDQFIPDSKTYSILLEGWGKA 193
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
++ + EMV G P +VTY I +D CK G +A+ + +EM+ C P+
Sbjct: 194 PNLPKAREIFREMVDMGCDPDIVTYGIMVDILCKAGRVDEAVGIVKEMDSSVCKPTSFIY 253
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+ L+H G+ I A F +M + ++ D+ YNA+I + + L A +++EM+
Sbjct: 254 SVLVHTYGIENRIEDAVYTFLDMERNEIEADVAVYNALIGAFCKVNKLKNAYRVLNEMDC 313
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K I ++ T + + L+ + +++ RMI+ P T M++K FC N ++++
Sbjct: 314 KGIRPNSRTCNIILNSLISCGDTDEAFRVFRRMIK-VCDPDADTYTMMIKMFCENDKLEM 372
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L +W Y+ + F P H +L+ GLC +G +A ++M+ + + S ++ L++
Sbjct: 373 ALKVWKYMRLKQFVPSMHTFSVLINGLCKKGNASKACILLEEMIEKGIRPSSVTFGKLKQ 432
Query: 466 YLVQANANEKLE 477
L++ + LE
Sbjct: 433 LLIKEGREDVLE 444
>gi|224084978|ref|XP_002307458.1| predicted protein [Populus trichocarpa]
gi|222856907|gb|EEE94454.1| predicted protein [Populus trichocarpa]
Length = 440
Score = 182 bits (463), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 109/423 (25%), Positives = 212/423 (50%), Gaps = 10/423 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S +VE+VL + A G+ A FF++ + H+ + AF + LA++R + W
Sbjct: 20 VSEQIVEDVLKKFENA---GMVAYRFFEWAEKQRHYNHSVKAFHTVIDSLAKIRQYQLMW 76
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+++ ++ ++ +++ I++ + ++ Q EE + F+ M++ FN
Sbjct: 77 DVVKVMKSKR--MVNVETFCIIMRKYARAQKVEEAVYTFNIMDKYDVPP----NLAAFNG 130
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL A C K +++A+ +F + RF P++KT +ILL G+ + ++ + EMV G
Sbjct: 131 LLSALCKSKNVRKAQEIFDSIKDRFVPDSKTYSILLEGWGKDPNLPKAREIFREMVSNGC 190
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
RP +VTY I +D CK G +A+ + EM+ C P+ + L+H G+ I A
Sbjct: 191 RPDIVTYGIMVDVLCKAGRVDEALGIVNEMDSTVCKPTPFIYSVLVHTYGIENRIEDAVS 250
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
F EM ++PD+ YNA+I + + L +++EM+ K + ++ T++ + L+
Sbjct: 251 TFLEMENNGIEPDVAVYNALIGAFCKANRLKNVYRVLNEMDCKGVTPNSRTFNIILSSLI 310
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ +++ RMI+ P T M++K FC + L +W Y+ + F P H
Sbjct: 311 GRGETDEAYRVFLRMIK-VCEPDADTYTMMIKMFCERDELKKALKVWKYMKLKRFMPSMH 369
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+L+ GLC +G +A ++M+ + + S ++ L++ L++ + L+ L + I
Sbjct: 370 TFQVLINGLCEKGDVTQACVLLEEMIEKGIRPSGVTFGRLRQLLIKEGREDVLKFLQKKI 429
Query: 484 KNL 486
L
Sbjct: 430 NVL 432
>gi|357114607|ref|XP_003559090.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Brachypodium distachyon]
Length = 486
Score = 182 bits (462), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 112/422 (26%), Positives = 220/422 (52%), Gaps = 13/422 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH--FTPTPDAFEKTLHILARMRYFDQ 121
++ + E VL RL A G+ A FF++ + T ++ + LA++R +
Sbjct: 65 VTPDVAERVLERLDNA---GMLAYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQL 121
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
W++++ ++R ++ +++ I++ + ++ Q ++E + F+ ME+ V F
Sbjct: 122 MWDVVAIMRR--EGVVNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVP----NLAAF 175
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N LL A C K +++A+ +F K+ RF P+ KT +ILL G+ ++ ++ M Y EM+
Sbjct: 176 NSLLGALCKSKNVRKAQEIFDKMNGRFNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDA 235
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +P +VTY I +D CK G +A+ + ++M C P+ + L+H G+ I A
Sbjct: 236 GCQPDIVTYGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDA 295
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
F +M K + PD+ YNA++++ + + A +MD+ME I ++ T++ +
Sbjct: 296 VATFLDMEKDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNK 355
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+ + +++ RMI+ + P + T M++K FC N V++ L +W Y+ + F P
Sbjct: 356 LISLGKDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDNVEMALKVWKYMRLKQFLPS 414
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-D 480
H +L+ GLC +G +A + M+ + + +++ L++ L++ + LE L D
Sbjct: 415 MHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLVD 474
Query: 481 RM 482
+M
Sbjct: 475 KM 476
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 131/374 (35%), Gaps = 76/374 (20%)
Query: 189 CTQKEMKEARSVFVKLLS-----------RFAPNNKTMNILLLGFKESG----------- 226
C++ EAR VFV++ + F P + +++ K SG
Sbjct: 5 CSRHTSMEARKVFVRMFTSGVGGSDVAVDSFDPAKRLCKLIISCQKASGLELELDHSDLR 64
Query: 227 -------------DVTAMEMF--------------------YHEMV--LRGFRPSVVTYN 251
D M + YH +V L R + ++
Sbjct: 65 VTPDVAERVLERLDNAGMLAYRFFEWARKQKRGGCNHTIRSYHTVVASLAKIRQYQLMWD 124
Query: 252 I----RIDGYCKKGCFGDAMR-------------LFEEMERVACLPSLQTITTLIHGAGL 294
+ R +G FG MR F ME+ +P+L +L+
Sbjct: 125 VVAIMRREGVVNVETFGIIMRKYARAQKFDEAVYTFNIMEKYGVVPNLAAFNSLLGALCK 184
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+N+ +A+++FD+M R PD Y+ ++ + +L E+ EM + D VT
Sbjct: 185 SKNVRKAQEIFDKMNGR-FNPDAKTYSILLEGWGKAPNLPKMREVYSEMLDAGCQPDIVT 243
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y M L K+ +E + M P T +L+ + V R++ + + +
Sbjct: 244 YGIMVDSLCKTGRVEEAVLVVQDMSSRGCQPTTFIYSVLVHTYGVEMRIEDAVATFLDME 303
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANAN 473
G P + LVT C ++E AF M + ++ ++ L+ +
Sbjct: 304 KDGIVPDVVVYNALVTAFCKVKKFENAFRVMDDMEGHGIAPNSRTWNIILNKLISLGKDD 363
Query: 474 EKLEDLDRMIKNLQ 487
E RMIK Q
Sbjct: 364 EAYRVFRRMIKRCQ 377
>gi|357128238|ref|XP_003565781.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Brachypodium distachyon]
Length = 547
Score = 181 bits (460), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 119/422 (28%), Positives = 208/422 (49%), Gaps = 17/422 (4%)
Query: 31 SEI-ERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
SE+ ER+ R+++ P +P + L L +S LV VL L A G+ AL F
Sbjct: 96 SEVAERVCRVVSSQP---EPRIASALDAL--GVNMSPELVAEVLRNLSNA---GILALAF 147
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ + F T ++F + L +++ F W L+ ++ LL+ + +++ R
Sbjct: 148 FRWAERQQGFRYTAESFHNLIEALGKIKQFRLVWSLVEAMRCR--GLLSKDTFRLIVRRY 205
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSR 207
++ + +E +E F++M G+ K ++N L+ K++K+A ++F +K R
Sbjct: 206 ARARKVKEAVETFEKMSS---FGL-KADLSDYNWLIDVLSKSKQVKKAHAIFKEMKRNGR 261
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ KT +L+ G+ D+ ++ Y EM+ G +P VV Y I +CK G +A+
Sbjct: 262 FVPDLKTYTVLMEGWGHEKDLLMLKSVYQEMLDAGIKPDVVAYGTLISSFCKSGKCDEAI 321
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F EME C+PS LI+G G + +A + F+ ++ NA++ +
Sbjct: 322 KVFREMEANGCMPSPHVYCMLINGLGSEERLDEALKYFELSKASGFPMEVPTCNAVVGAY 381
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R A +++DEM + IG + TY + L+KS +E ++ RM P+
Sbjct: 382 CRSSKFQHAFKMVDEMRKTGIGPNARTYDIILQYLIKSQKIEEAYNVFQRMGMEGCEPQL 441
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T M++ FC N RVD+ L +W + ++G P H L+ GLC R EEA ++
Sbjct: 442 NTYTMMVGMFCSNERVDMALKVWKQMKEKGVLPCMHMFSSLINGLCFENRLEEACVYFQE 501
Query: 448 ML 449
ML
Sbjct: 502 ML 503
>gi|242038757|ref|XP_002466773.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
gi|241920627|gb|EER93771.1| hypothetical protein SORBIDRAFT_01g013990 [Sorghum bicolor]
Length = 487
Score = 180 bits (456), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 108/432 (25%), Positives = 228/432 (52%), Gaps = 15/432 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH--FTPTPDAFEKTLHILARMRYFDQ 121
++ + E VL RL A G+ A FF++ + T ++ + LA++R +
Sbjct: 66 VTPEVAERVLERLDNA---GMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQL 122
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
W++++ +++ + +++ SI++ + ++ Q ++E + F+ MER G+ F
Sbjct: 123 MWDVVAVMRK--EGVANVETFSIIMRKYARAQKFDEAVYTFNIMER---YGV-AHNLAAF 176
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N LL A C K +++A+ +F K+ +RF+P+ KT +ILL G+ + ++ M Y +M+
Sbjct: 177 NSLLGALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPNLPKMREVYSDMLAA 236
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +P +VTY I +D CK G +A+ + ++M C P+ + L+H G+ I A
Sbjct: 237 GCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSVLVHTYGVDMRIEDA 296
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
F +M K + PD+ YNA++++ + + + A +MD+ME I ++ T++ +
Sbjct: 297 VATFLDMEKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGISPNSRTWNIILNT 356
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+ + +++ MI+ + P + T M++K FC N ++++ L +W Y+ + F P
Sbjct: 357 LISLGKDDEAYRVFRNMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQFLPS 415
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
H +L+ GLC +G +A + M+ + + +++ L++ L++ + + LD
Sbjct: 416 MHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG---RKDVLDF 472
Query: 482 MIKNLQAVLPPP 493
+++ ++ ++ P
Sbjct: 473 LVEKMKMLIQEP 484
>gi|255580475|ref|XP_002531063.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529358|gb|EEF31324.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 110/388 (28%), Positives = 199/388 (51%), Gaps = 11/388 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S LV VL RL A G AL FFK+ + F +++ + L +++ F+ W
Sbjct: 111 VSPALVLEVLKRLSNA---GALALSFFKWAEKQKGFMYNTESYNALIDSLGKIKQFNMIW 167
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ ++R +LT ++ +++ R ++ +E + F++ME+ G+ K S +FN
Sbjct: 168 NLVNDMKRK--GVLTKETFALISRRYARSGKVKEAMNTFEKMEK---FGL-KIESTDFNR 221
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL +++ A++VF K+ + RF P+ K+ ILL G+ + ++ ++ Y EM G
Sbjct: 222 LLDTLIKSRQVLSAQNVFDKMKIRRFVPDIKSYTILLEGWGQEKNLLKLDEVYREMKDEG 281
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VVTY I I+ YCK + DA+ LF EME C PS TLI+G G VR + +A
Sbjct: 282 FEPDVVTYGILINAYCKVRKYDDAIELFREMESKNCQPSPHIFCTLINGLGSVRRLSEAL 341
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ F P+ YNA++ + ++ A ++DEM + +G ++ TY + L
Sbjct: 342 EFFRRSKASGFAPETPTYNAVVGAYCWSMRIDDAYRMVDEMRKSGVGPNSRTYDIILHHL 401
Query: 363 MKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K+ ++++M E + P T ++++ FC +V+ + +W + +G P
Sbjct: 402 IKAEKTTEAFSVFEKMSSEEECEPTVSTYDIIVRMFCNMDKVESAIKVWDRMKAKGVHPG 461
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQML 449
H +L+ LC + + A + ++ML
Sbjct: 462 MHMFSILINSLCHENKLDIACKYFQEML 489
>gi|326520119|dbj|BAK03984.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 485
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 111/423 (26%), Positives = 221/423 (52%), Gaps = 14/423 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH---FTPTPDAFEKTLHILARMRYFD 120
++ + E VL RL A G+ A FF++ + T +F + LA++R +
Sbjct: 63 VTPDVAERVLERLDNA---GMLAYRFFEWARKQRRGGGCAHTVRSFHTVVASLAKIRQYQ 119
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
W++++ ++R ++ +++ I++ + ++ Q +E + F+ ME+ V
Sbjct: 120 LMWDVVAIMRRQ--GVVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVP----NLAA 173
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A C K +++A+ +F ++ RF+P+ KT +ILL G+ + ++ M Y +M+
Sbjct: 174 FNSLLCALCKSKNVRKAQEIFEQMNGRFSPDAKTYSILLEGWGRAPNLPKMRKVYSDMLD 233
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G +P +VTY I +D CK G +A+ + ++M C P+ + L+H G+ I
Sbjct: 234 AGCQPDIVTYGIMVDSLCKTGRVEEAVFVVQDMTSRGCQPTTFIYSVLVHTYGVEMRIED 293
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A F +M K + PD+ YNA++++ + + + A +MD+ME I ++ T++ +
Sbjct: 294 AVATFLDMQKDGIVPDVVVYNALVTAFCKVKKFDNAFRVMDDMEGHGITPNSRTWNIILN 353
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L+ + +++ RMI+ + P + T M++K FC N R+++ L +W Y+ + F P
Sbjct: 354 KLISLGKDDEAYRVFRRMIK-RCQPDSDTYTMMIKMFCENDRLEMALKVWKYMRLKQFLP 412
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL- 479
H +L+ GLC +G +A + M+ + + +++ L++ L++ + LE L
Sbjct: 413 SMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLEFLV 472
Query: 480 DRM 482
D+M
Sbjct: 473 DKM 475
>gi|449463418|ref|XP_004149431.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
gi|449499065|ref|XP_004160711.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Cucumis sativus]
Length = 439
Score = 179 bits (453), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 206/406 (50%), Gaps = 10/406 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S + E VL R A G+ A FF++ + ++ + A+ + LA++R + W
Sbjct: 20 ISPEIAEPVLRRFENA---GMLAYRFFEWASKQRNYVHSVRAYHSMIESLAKIRQYQMVW 76
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+L++ ++ + +L +++ I++ + ++ Q EE + F+ ME+ K FN
Sbjct: 77 DLVNAMR--NKEILNVEAFCIIMRKYARAQKVEEAVYTFNVMEKYNM----KPNVAAFNG 130
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL A C K +++A+ +F + +F P++KT +IL+ G+ + ++ Y EM+ G
Sbjct: 131 LLSALCKSKNVRKAQEIFDNMKDQFVPDSKTYSILIEGWGRAPNLPKAREIYREMIDSGC 190
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P VTY+I +D CK G +A+ + +EM+ C PS + L+H G+ I A
Sbjct: 191 IPDEVTYSIMVDVLCKAGRVDEAVEIVKEMDYNNCKPSSFIYSVLVHTYGVENRIEDAVS 250
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
F EM + + D+ AYNA+IS+ + + ++ +M+ K + ++ T + + L+
Sbjct: 251 TFLEMERNGVMADVAAYNALISAFCKANKMKNVYRVLKDMDLKGVNPNSRTCNIIINSLI 310
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ K++ RMI+ P + M++K FC +D+ L +W Y+ + F P H
Sbjct: 311 GRGETDEAFKIFRRMIK-VCEPDVDSYTMIIKMFCGRKELDMALKIWKYMKKKQFVPSMH 369
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+L+ GLC G +A ++M+ + + S A++ L+ L++
Sbjct: 370 TFSVLINGLCQIGNATQACVLLEEMIEKGIRPSGATFGRLRHLLIK 415
>gi|115455503|ref|NP_001051352.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|14488357|gb|AAK63924.1|AC084282_5 unknown protein [Oryza sativa Japonica Group]
gi|108711214|gb|ABF99009.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|113549823|dbj|BAF13266.1| Os03g0761300 [Oryza sativa Japonica Group]
gi|125545804|gb|EAY91943.1| hypothetical protein OsI_13630 [Oryza sativa Indica Group]
gi|125588003|gb|EAZ28667.1| hypothetical protein OsJ_12678 [Oryza sativa Japonica Group]
Length = 484
Score = 177 bits (450), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 112/432 (25%), Positives = 221/432 (51%), Gaps = 15/432 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH--FTPTPDAFEKTLHILARMRYFDQ 121
++ + E VL RL A G+ A FF++ + T ++ + LA++R +
Sbjct: 63 VTPDVAERVLERLDNA---GMLAYRFFEWARRQKRGGCAHTVRSYHTVVASLAKIRQYQL 119
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
W++++ ++R + +++ I++ + ++ Q +E + F+ ME+ V F
Sbjct: 120 MWDVVAVMRR--EGAVNVETFGIIMRKYARAQKVDEAVYTFNVMEKYGVVP----NLAAF 173
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N LL A C K +++A+ +F K+ SRF+P+ KT +ILL G+ + ++ M Y EM+
Sbjct: 174 NSLLGALCKSKNVRKAQEIFDKMNSRFSPDAKTYSILLEGWGRAPNLPKMREVYSEMLDA 233
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P +VTY I +D CK G +A+R+ ++M C P+ + L+H G+ I A
Sbjct: 234 GCEPDIVTYGIMVDSLCKTGRVEEAVRVVQDMTSRGCQPTTYIYSVLVHTYGVEMRIEDA 293
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
F +M K + PDI YNA++S+ + + A ++++ME I ++ T++ +
Sbjct: 294 VATFLDMEKDGIVPDIVVYNALVSAFCKAKKFENAFRVLNDMEGHGITTNSRTWNIILNH 353
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+ + K++ RMI+ P T M++K FC N +V++ L +W Y+ + F P
Sbjct: 354 LISLGRDDEAYKVFRRMIKC-CQPDCDTYTMMIKMFCENDKVEMALKVWKYMRLKQFLPS 412
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
H +L+ GLC + +A + M+ + + +++ L++ L++ + + LD
Sbjct: 413 MHTFSVLINGLCDKREVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEG---RKDVLDF 469
Query: 482 MIKNLQAVLPPP 493
+++ + ++ P
Sbjct: 470 LVEKMNILIQEP 481
>gi|225424178|ref|XP_002280443.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial [Vitis vinifera]
Length = 531
Score = 177 bits (449), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 110/391 (28%), Positives = 200/391 (51%), Gaps = 11/391 (2%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ +S TLV VL +L ++G+ AL FF++ + F + + + + L +++ F
Sbjct: 106 SVDVSPTLVLEVLKKL---SNSGVIALSFFRWAEKQKGFKYSTENYNALIEALGKIKQFK 162
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
W L++ ++ LLT ++ +++ R ++ + +E +E F++ME+ G++ S+
Sbjct: 163 MIWNLVNDMR--SKGLLTQETFALISRRYARARKVKEAVETFEKMEK---FGLQPVLSD- 216
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL A C + ++ A+ VF K+ R F P+ K+ ILL G+ + ++ ++ Y EM
Sbjct: 217 FNRLLDALCKSRHVERAQEVFDKMKDRKFRPDIKSYTILLEGWGQEQNLLRLDEVYREMK 276
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P VTY I I+ +CK + A+ LF +ME C+P+ TLI+G G R +
Sbjct: 277 DEGFEPDAVTYGILINAHCKARRYDAAVELFHKMEANKCMPTPHIYCTLINGLGSERRLT 336
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A Q F+ P+ YNA++ S + ++ A ++DEM + +G TY +
Sbjct: 337 EALQFFERSKASGFTPEAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 360 FGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L+K+ + +++ M E P T ++++ FC RVD+ L +W + +G
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P H L+ LC + +EA + +ML
Sbjct: 457 LPGMHMFSTLINSLCYENKLDEACKYFHEML 487
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/230 (22%), Positives = 99/230 (43%), Gaps = 9/230 (3%)
Query: 103 PDAFEKTLHILA--RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PDA + I A + R +D A EL H + + T +++ + + E L+
Sbjct: 282 PDAVTYGILINAHCKARRYDAAVELF-HKMEANKCMPTPHIYCTLINGLGSERRLTEALQ 340
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILL 219
F+R + F + +N ++ ++C M +A + ++ P +T +I+L
Sbjct: 341 FFERSKASGFTP----EAPTYNAVVGSYCQSMRMDDAYRIVDEMRKCGVGPQTRTYDIIL 396
Query: 220 LGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
K A +F G PSV TY I + +C + A+R+++EM+
Sbjct: 397 HHLIKARRTKEAYRVFQGMSSEPGCEPSVSTYEIVVRMFCNEERVDMALRVWDEMKAKGV 456
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LP + +TLI+ + +A + F EM ++P ++ + +L+
Sbjct: 457 LPGMHMFSTLINSLCYENKLDEACKYFHEMLDMGIRPPAAMFSNLKQTLL 506
>gi|356515931|ref|XP_003526650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Glycine max]
Length = 461
Score = 176 bits (446), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 207/414 (50%), Gaps = 10/414 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S LVENVL R + G+ A FF++ + ++ + A+ + LA++R + W
Sbjct: 42 VSPDLVENVLKRF---ENAGMPAFRFFEWAEKQRGYSHSIRAYHLMIESLAKIRQYQIVW 98
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+L+S +++ +L +++ IM+ + ++ +E + F+ M++ V FN
Sbjct: 99 DLVSAMRKK--GMLNVETFCIMMRKYARANKVDEAVYTFNVMDKYDVVP----NLAAFNG 152
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL A C +++A+ +F + +F P+ K+ +ILL G+ ++ ++ + EMV G
Sbjct: 153 LLSALCKSNNVRKAQEIFDAMKGQFVPDEKSYSILLEGWGKAPNLPRAREVFREMVEAGC 212
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P VVTY I +D CK G +A+ + +EM+ C P+ + L+H G+ I A
Sbjct: 213 DPDVVTYGIMVDVLCKAGRVDEAVEVVKEMDVGNCRPTSFIYSVLVHTYGVEHRIEDAID 272
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
F EM K+ +K D+ AYNA+I + + ++ EME + ++ T + + ++
Sbjct: 273 TFLEMAKKGIKADVVAYNALIGAFCKVNKFKNVHRVLKEMESNGVAPNSRTCNVIISSMI 332
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ +++ RMI+ P T M++K FC +++ L +W Y+ + F P H
Sbjct: 333 GQGQTDRAFRVFCRMIK-LCEPDADTYTMMIKMFCEKNELEMALKIWKYMKSKQFVPSMH 391
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
L+ GLC + +A ++M+ + + S ++ L++ L++ + L+
Sbjct: 392 TFSALIKGLCEKDNAAKACVVMEEMIEKGIRPSRITFGRLRQLLIKEGREDVLK 445
>gi|227463004|gb|ACP39954.1| pentatricopeptide repeat protein [Gossypium hirsutum]
gi|227463006|gb|ACP39955.1| pentatricopeptide repeat protein [Gossypium hirsutum]
Length = 547
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 118/431 (27%), Positives = 208/431 (48%), Gaps = 11/431 (2%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ +S +LV VL RL A G+ AL FF + + F +++ + L +++ F
Sbjct: 118 SIKVSPSLVVEVLKRLSNA---GVIALSFFTWAEKQKGFKYNTESYNALIEALGKIKQFK 174
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
L++ ++ LL + +++ R ++ + EE +EAF+RME F K + +
Sbjct: 175 LIRSLVNEMKSR--KLLNKDTFALISRRHARARKVEEAIEAFERMEEFGF----KLETSD 228
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL C + +++A VF K+ R F P+ K+ ILL G+ + ++ ++ Y EM
Sbjct: 229 FNRLLDTLCKSRHVEKANKVFDKMKKRRFVPDIKSYTILLEGWGKEHNLLRLDEVYLEMK 288
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P VVTY I I YCK + A+ LF EME C P+ TLI+G G + +
Sbjct: 289 YDGFEPDVVTYGILISAYCKAKKYDAAIELFHEMEAKNCKPTPHVYCTLINGLGSEKRLS 348
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + F+ P+ YN+++ + ++ A +++DEM + G ++ TY +
Sbjct: 349 EALEFFERFKSCGFTPEAPTYNSLVGAYCWSMRIDDAFQVIDEMRKHSAGPNSRTYDIIL 408
Query: 360 FGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L+K+ + +M E P T ++++ FC RVDL +W + +G
Sbjct: 409 HHLIKARRTNEAYFRFQKMSNEPGCEPTVSTYEIIVRMFCNEDRVDLAKQVWDQMKAKGV 468
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P H L+T LC + + EA + ++ML + + L++ L+ N++ +
Sbjct: 469 LPGMHMYSDLITSLCHKNKLGEACKYFQEMLDAGIRPPAKMFSNLKQALLDEGKNDEALN 528
Query: 479 LDRMIKNLQAV 489
L R I L+
Sbjct: 529 LARKINKLRGT 539
>gi|297841875|ref|XP_002888819.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334660|gb|EFH65078.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 512
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 122/456 (26%), Positives = 217/456 (47%), Gaps = 18/456 (3%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
S S + ++I +I++ F D + TLL + LS L+E VL +L A G+
Sbjct: 60 SANDVSQDADKICKILS--KFTDSKVE-TLLNE--ASVKLSPALIEEVLKKLSNA---GV 111
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
AL FK+ F T + + L +++ F W L+ +++ LL+ + ++
Sbjct: 112 LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWNLVDDMKQ--KKLLSKDTFAL 169
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ R ++ + +E + AF +ME F K S +FN +L + + +A+ VF K+
Sbjct: 170 ISRRYARARKVKEAITAFHKMEDYGF----KMESSDFNRMLDILSKSRNVGDAQKVFDKM 225
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
RF P+ K+ ILL G+ + ++ + Y EM GF P VV Y I I+ YCK +
Sbjct: 226 KKKRFEPDIKSYTILLEGWGQELNLLRVNEVYGEMKDEGFEPDVVAYGIIINAYCKAKKY 285
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+R F EME+ C PS +LI+G G + ++ A + F+ + YNA+
Sbjct: 286 DEAVRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 345
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + + + A + +DEM K IG + TY + L++ + ++Y +M
Sbjct: 346 VGAYCWSQRMEDAFKTVDEMRSKGIGPNARTYDIILHHLIRMQRTKEAYEVYQKM---SC 402
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T ++++ FC R+D+ + +W + +G P H L+T LC + +EA E
Sbjct: 403 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 462
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ML + + L++ L+ +K+ DL
Sbjct: 463 YFNEMLDVGIRPPGHLFSRLKQTLLDEGRKDKVADL 498
>gi|313851107|ref|NP_001186539.1| pentatricopeptide repeat protein [Zea mays]
gi|312064725|gb|ADQ27447.1| pentatricopeptide repeat protein [Zea mays]
gi|414872960|tpg|DAA51517.1| TPA: hypothetical protein ZEAMMB73_325693 [Zea mays]
Length = 489
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 219/429 (51%), Gaps = 20/429 (4%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH--FTPTPDAFEKTLHILARMRYFDQ 121
++ + E+VL L A G+ A FF++ + T ++ + LA++R +
Sbjct: 68 VTPEIAESVLKHLDNA---GMLAYRFFEWARKQKRGVCAHTVRSYHTVVTSLAKIRQYQL 124
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE- 180
W++++ +++ + +++ I++ + ++ Q +E + F+ ME K+G
Sbjct: 125 MWDVVAIMRK--EGVANVETFGIIMRKYARAQKLDEAVYTFNVME--------KYGVAHN 174
Query: 181 ---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
FN LL A C K +++A+ +F K+ +RF+P+ KT +ILL G+ + + M Y +
Sbjct: 175 LAAFNSLLSALCKSKNVRKAQEIFDKMNNRFSPDAKTYSILLEGWGRAPSLPKMREVYSD 234
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ G +P +VTY I +D CK G +A+ + ++M C P+ + L+H G+
Sbjct: 235 MLAAGCQPDIVTYGIMVDALCKTGRVEEAVCVVQDMSSRGCQPTTFIYSILVHTYGVDMR 294
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I A F +M K + PD+ YNA+I++ + + A +MD+M+ I ++ T++
Sbjct: 295 IEDAVAAFLDMEKDGIMPDVVVYNALITAFCKVKKFENAFRVMDDMQGHGISPNSRTWNI 354
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L+ + +++ MI+ + P + T M++K FC N ++++ L +W Y+ +
Sbjct: 355 ILNTLISLGKDDEAYRVFRSMIK-RCKPDSDTYTMMIKMFCENDKIEMALKVWKYMRLKQ 413
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
F P H +L+ GLC +G +A + M+ + + +++ L++ L++ + L+
Sbjct: 414 FLPSMHTFSVLINGLCDKGEVSQACVLLEDMIEKGIRPPGSTFGKLRQLLLKEGRKDVLD 473
Query: 478 DLDRMIKNL 486
L +K L
Sbjct: 474 FLVEKMKIL 482
>gi|356544698|ref|XP_003540784.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 495
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 121/421 (28%), Positives = 205/421 (48%), Gaps = 24/421 (5%)
Query: 42 DHPFPDQPLHPTLLQHLPQTTPLSST---------LVENVLGRLFAAHSNGLKALEFFK- 91
+HP D + +L+ P+T + T LV V+ RL+ ++G KAL+FFK
Sbjct: 37 EHP-SDATIAKLVLESDPRTVSEALTKPTIQWTPDLVNKVMKRLW---NHGPKALQFFKH 92
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRI 149
HP +T +P +F+ + I ARMR F+ AW L+ ++ R PS K+++I+ R
Sbjct: 93 LDRHHPSYTHSPSSFDHAVDIAARMRDFNSAWALVGRMRSLRLGPSP---KTLAILAERY 149
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
+ + F M GIR+ FN LL C K ++ A S+ L SRF
Sbjct: 150 ASNGKPHRAVRTFLSMAEH---GIRQ-DLHSFNTLLDILCKSKRVETAHSLLKTLTSRFR 205
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T NIL G+ EMV RG P++VTYN + GY + +A
Sbjct: 206 PDTVTYNILANGYCLIKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAWEF 265
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ EM++ C + T TT+IHG G+ ++ +A+++F EM K + P++ YNA+I L +
Sbjct: 266 YLEMKKRKCEIDVVTYTTVIHGFGVAGDVKKAKRVFHEMVKEGVVPNVATYNALIQVLCK 325
Query: 330 CRDLNAAMELMDEMEEKRIGHDN-VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ A+ + +EM + + N VTY+ + GL +E +RM E +
Sbjct: 326 KDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERALGFMERMGEHGLRACVQ 385
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +++++FC V+ L ++G + D P+ ++L++ + R + E+ K +
Sbjct: 386 TYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 445
Query: 449 L 449
+
Sbjct: 446 M 446
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 71/166 (42%), Gaps = 8/166 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
P + + +L + + A + + R + + + ++++ + E L
Sbjct: 310 VPNVATYNALIQVLCKKDSVENAVVVFEEMAREGVCVPNVVTYNVVIRGLCHVGDMERAL 369
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNIL 218
+RM G+R + +NV+++ FC E+++A VF K+ PN T N+L
Sbjct: 370 GFMERMGEH---GLRAC-VQTYNVVIRYFCDAGEVEKALEVFGKMGDGSCLPNLDTYNVL 425
Query: 219 LLGF---KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ K+S D+ +MV RGF P T+N ++G G
Sbjct: 426 ISAMFVRKKSEDLVVAGKLLMDMVDRGFLPRKFTFNRVLNGLVITG 471
>gi|15223927|ref|NP_177262.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169669|sp|Q9C9A2.1|PP112_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g71060, mitochondrial; Flags: Precursor
gi|12323433|gb|AAG51696.1|AC016972_15 hypothetical protein; 31939-30407 [Arabidopsis thaliana]
gi|332197036|gb|AEE35157.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 510
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 121/456 (26%), Positives = 215/456 (47%), Gaps = 18/456 (3%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
S S + ERI +I+ F D + TLL + LS L+E VL +L A G+
Sbjct: 58 SANDASQDAERICKILT--KFTDSKVE-TLLNE--ASVKLSPALIEEVLKKLSNA---GV 109
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
AL FK+ F T + + L +++ F W L+ ++ LL+ ++ ++
Sbjct: 110 LALSVFKWAENQKGFKHTTSNYNALIESLGKIKQFKLIWSLVDDMK--AKKLLSKETFAL 167
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ R ++ + +E + AF +ME F K S +FN +L + + +A+ VF K+
Sbjct: 168 ISRRYARARKVKEAIGAFHKMEEFGF----KMESSDFNRMLDTLSKSRNVGDAQKVFDKM 223
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
RF P+ K+ ILL G+ + ++ ++ EM GF P VV Y I I+ +CK +
Sbjct: 224 KKKRFEPDIKSYTILLEGWGQELNLLRVDEVNREMKDEGFEPDVVAYGIIINAHCKAKKY 283
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+R F EME+ C PS +LI+G G + ++ A + F+ + YNA+
Sbjct: 284 EEAIRFFNEMEQRNCKPSPHIFCSLINGLGSEKKLNDALEFFERSKSSGFPLEAPTYNAL 343
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + + + A + +DEM K +G + TY + L++ + ++Y M
Sbjct: 344 VGAYCWSQRMEDAYKTVDEMRLKGVGPNARTYDIILHHLIRMQRSKEAYEVYQTM---SC 400
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T ++++ FC R+D+ + +W + +G P H L+T LC + +EA E
Sbjct: 401 EPTVSTYEIMVRMFCNKERLDMAIKIWDEMKGKGVLPGMHMFSSLITALCHENKLDEACE 460
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ML + + L++ L+ +K+ DL
Sbjct: 461 YFNEMLDVGIRPPGHMFSRLKQTLLDEGRKDKVTDL 496
>gi|224111544|ref|XP_002315895.1| predicted protein [Populus trichocarpa]
gi|222864935|gb|EEF02066.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 103/387 (26%), Positives = 194/387 (50%), Gaps = 10/387 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S +LV L +L A G AL FF++ + F + +++ + L +++ F+ W
Sbjct: 3 VSPSLVFEALKKLSNA---GALALSFFRWAEKQKGFQYSTESYHALIESLGKIKQFNVIW 59
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ +++ LL ++ +++ R ++ + +E ++AF +ME+ G+ K S + N
Sbjct: 60 NLVTDMKQK--GLLNKETFALISRRYARARKVKEAVDAFMKMEK---FGL-KIESSDVNR 113
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL C ++++ A+ VF K+ R F + K+ ILL G+ + +++ + Y+EM G
Sbjct: 114 LLDTLCKSRQVERAQLVFDKMNKRGFVADIKSYTILLEGWGQEKNLSRLMEVYNEMKDEG 173
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VVTY I I+ +CK + DA+ LF EME C PS TLI+G G + + +A
Sbjct: 174 FEPDVVTYGILINAHCKSRRYDDAIELFHEMEAKNCKPSPHIYCTLINGLGAEKRLSEAL 233
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ F+ P+ YNA++ + ++ +DEM + +G TY + L
Sbjct: 234 EFFELSKASGFVPEAPTYNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHL 293
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+++ + ++ +M P T ++++ FC RVD+ + +W + +G P
Sbjct: 294 IRAGKTKIAYSVFQKMSCEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVM 353
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
H L+ LC + +EA ++ML
Sbjct: 354 HMFSTLINSLCHESKLDEACMYFQEML 380
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/136 (22%), Positives = 64/136 (47%), Gaps = 1/136 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ A+C + M + R++ P+ +T +I+L +G + +M
Sbjct: 251 YNAVVGAYCWSERMDDVQRTIDEMRKGGVGPSARTYDIILHHLIRAGKTKIAYSVFQKMS 310
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +PSV TY I + +C + A++++++M+ LP + +TLI+ +
Sbjct: 311 CEGCQPSVSTYEIIVRMFCNEDRVDMAIKVWDQMKAKGILPVMHMFSTLINSLCHESKLD 370
Query: 300 QARQLFDEMPKRNLKP 315
+A F EM ++P
Sbjct: 371 EACMYFQEMLDVGIRP 386
>gi|255552099|ref|XP_002517094.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543729|gb|EEF45257.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 549
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 116/458 (25%), Positives = 223/458 (48%), Gaps = 15/458 (3%)
Query: 28 TQSSEIERITRIINDHPFPDQPLHPTLLQHLPQ--TTPLSSTLVENVLGRLFAAHSNGLK 85
Q S+I+R++ I+ H P +++Q L P ++ L+ +L R ++ +
Sbjct: 96 AQVSDIDRVSEILKKH----YPCTDSVVQALNDCGVNP-TNNLISQLLNRFC---NDWVP 147
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL F + + PD ++ + IL R + F WEL+ ++ ++L +M +
Sbjct: 148 ALGLFTWAKHQTGYVHPPDLYDLMVDILGRRKKFSFMWELVKEMENLE-GYVSLVTMKKV 206
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ R+++ ++++ +EAF +E+ +G+RK E NVL+ A + ++ A S F++
Sbjct: 207 MRRLARAGNFQDAVEAFRGIEK---LGVRK-DIEALNVLMDALVKEGSVEHAYSAFMEFK 262
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+ ++ NILL G+ ++ + EM +GF+P+VV+Y I+ YCK F +
Sbjct: 263 DSIHVDFQSFNILLHGYCKARKLDDARKIMDEMDKQGFQPNVVSYTCFIELYCKLKDFRN 322
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+F EM+ +C P++ T T +H G + +++A ++++ M PD Y+++I
Sbjct: 323 VEAIFSEMQEKSCKPNVITYTIFMHALGKAKQVNKALEVYEMMKSNCCVPDASFYSSLIF 382
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L + L A ++ ++M+++ + D +TY+TM E KL RM E P
Sbjct: 383 VLTQSGRLKDAWDVFEDMKKQGVSPDLLTYNTMITSACTHLEEENALKLLRRMEEDSCKP 442
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
+T L+K C R+ + L ++ LLV GLC G+ E A
Sbjct: 443 DIQTYAPLLKMCCRKKRIKVLKFLLNHMFKNNISIDLGTYVLLVGGLCKSGKLELACSFF 502
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
++M+++ + +Y+ML L Q N E E + +++
Sbjct: 503 EEMVMKGLIPRDRTYKMLVEELEQNNLTEAKEKIQKLM 540
>gi|15228788|ref|NP_191813.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122214682|sp|Q3EAF8.1|PP294_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62540, mitochondrial; Flags: Precursor
gi|332646841|gb|AEE80362.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 203/424 (47%), Gaps = 12/424 (2%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
++T E+ER+ ++I++ D+ + L + LS L+ VL R A
Sbjct: 124 SSTNPEEVERVCKVIDELFALDRNMEAVLDE---MKLDLSHDLIVEVLERFRHARK---P 177
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FF + + F + + ILA+ R F+ ++ + LLT+++ +I
Sbjct: 178 AFRFFCWAAERQGFAHASRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIA 235
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + ++ + F+ M++ F K G E N LL + K KEA+ +F KL
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKF----KIGVETINCLLDSLGRAKLGKEAQVLFDKLK 291
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
RF PN T +LL G+ ++ +++M+ G +P +V +N+ ++G + D
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 351
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A++LF M+ P++++ T +I ++ A + FD+M L+PD Y +I+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ L+ EL+ EM+EK D TY+ + + E ++Y++MI+ + P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 471
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T M+MK + V ++G +W +I +G CP ++ +L+ GL S G+ EA
Sbjct: 472 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 531
Query: 446 KQML 449
++ML
Sbjct: 532 EEML 535
>gi|297842515|ref|XP_002889139.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297334980|gb|EFH65398.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 482
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 113/482 (23%), Positives = 233/482 (48%), Gaps = 15/482 (3%)
Query: 1 MLLAKRLKRSDKFPGISDRLALLFSTTTQSSEIERITRIIND--HPFPDQPLHPTLLQHL 58
M + + L R + S A L+S++ Q ++ + + I+ P + L Q
Sbjct: 1 MTMIRILNRQSRLCSKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVIDSALDQSG 60
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
+ +P +VE+VL R A GL A FF+++ + H+ + A+ + A++R
Sbjct: 61 LRVSP---EVVEDVLYRFRNA---GLLAYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQ 114
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+ W+L++ + + +L +++ I++ + ++ Q +E + AF+ ME+
Sbjct: 115 YKLMWDLINAMMKKK--MLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPP----NL 168
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN LL A C K +++A+ +F + RF P++KT +ILL G+ + ++ + EM
Sbjct: 169 VAFNGLLSALCKSKNVRKAQEIFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREM 228
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P +VTY+I +D CK G +A+ + M+ C P+ + L+H G +
Sbjct: 229 VDAGSLPDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTETRL 288
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A F EM + +K D+ +N++I + + + ++ EM+ K + ++ + + +
Sbjct: 289 EEAVDTFLEMERSGMKADVAVFNSLIGAFCKTNRMKNVYRVLKEMKSKGVTPNSKSCNII 348
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L+ + ++ +MI+ P T M++K FC ++ +W Y+ +G
Sbjct: 349 LRHLIDRGEKDEAFDVFRKMIKV-CEPDADTYTMMIKMFCEKKEMETADKVWKYMRKKGV 407
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P H +L+ GLC ++A ++M+ + S A++ L++ L++ + + L+
Sbjct: 408 FPSMHTFSVLINGLCEEPNTQKACVLLEEMIEMGIRPSGATFGRLRQLLLKEDREDVLKF 467
Query: 479 LD 480
L+
Sbjct: 468 LN 469
>gi|15241508|ref|NP_196986.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75173968|sp|Q9LEQ7.1|PP382_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g14820, mitochondrial; Flags: Precursor
gi|9755750|emb|CAC01881.1| putative protein [Arabidopsis thaliana]
gi|332004697|gb|AED92080.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 109/424 (25%), Positives = 203/424 (47%), Gaps = 12/424 (2%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
++T E+ER+ ++I++ D+ + L + LS L+ VL R A
Sbjct: 123 SSTNPEEVERVCKVIDELFALDRNMEAVLDE---MKLDLSHDLIVEVLERFRHARK---P 176
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FF + + F + + ILA+ R F+ ++ + LLT+++ +I
Sbjct: 177 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIA 234
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + ++ + F+ M++ F K G E N LL + K KEA+ +F KL
Sbjct: 235 MKAFAAAKERKKAVGIFELMKKYKF----KIGVETINCLLDSLGRAKLGKEAQVLFDKLK 290
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
RF PN T +LL G+ ++ +++M+ G +P +V +N+ ++G + D
Sbjct: 291 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSD 350
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A++LF M+ P++++ T +I ++ A + FD+M L+PD Y +I+
Sbjct: 351 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 410
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ L+ EL+ EM+EK D TY+ + + E ++Y++MI+ + P
Sbjct: 411 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEP 470
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T M+MK + V ++G +W +I +G CP ++ +L+ GL S G+ EA
Sbjct: 471 SIHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYL 530
Query: 446 KQML 449
++ML
Sbjct: 531 EEML 534
>gi|356549210|ref|XP_003542990.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Glycine max]
Length = 648
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 120/451 (26%), Positives = 216/451 (47%), Gaps = 14/451 (3%)
Query: 32 EIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFK 91
E+ER+ ++I++ D+ + L + LS LV +VL R A A FF
Sbjct: 173 EVERVCKVIDELFALDRNMEVVLDEC---GVRLSHDLVVDVLQRFKHARK---PAFRFFC 226
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
+ + P F + + +L R R F+ ++ + LLT+++ SI + ++
Sbjct: 227 WAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAMLEEMGEK--GLLTMETFSIAIKAFAE 284
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ ++ + FD M++ F K G + N LL + T K KEA++VF KL RF P+
Sbjct: 285 AKQRKKAVGIFDLMKKYGF----KVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPS 340
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+T ILL G+ ++ ++EM+ RGF P VV +N+ ++G K DA++LFE
Sbjct: 341 LQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDVVAHNVMLEGLLKCKKKSDAIKLFE 400
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M+ P++++ T +I + + +A + FD M R +PD Y +I+ R +
Sbjct: 401 IMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQK 460
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTV 390
++ L+ EM E+ D TY+ + LM S + + ++Y +MI+ P T
Sbjct: 461 KMDMVYSLLKEMRERGCPPDGRTYNAL-IKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTY 519
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
M+MK + V ++G +W + +G CP ++ + + GL + R EA + ++ML
Sbjct: 520 NMIMKSYFVTKNYEMGHEIWDEMHQKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLE 579
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ + + Y + + LE+L R
Sbjct: 580 KGMKAPKLDYNKFASDISKTGNAVILEELAR 610
>gi|297821162|ref|XP_002878464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324302|gb|EFH54723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 628
Score = 162 bits (409), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 203/424 (47%), Gaps = 12/424 (2%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
++T E+ER+ ++I++ D+ + L + LS L+ VL R A
Sbjct: 133 SSTNPEEVERVCKVIDELFALDRNMEAVLDE---MKVELSHDLIVKVLERFRHARK---P 186
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FF + + F + + ILA+ R F+ ++ + LLT+++ +I
Sbjct: 187 AFRFFCWAAEKQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIA 244
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + ++ + F+ M++ F K G E N LL + K KEA+ +F KL
Sbjct: 245 MKAFAAAKERKKAVGIFELMKKYKF----KIGVETINCLLDSLGRAKLGKEAQVLFDKLK 300
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
RF PN T +LL G+ ++ +++M+ +G +P +V +N+ ++G + D
Sbjct: 301 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD 360
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A++LF M+ P++++ T +I ++ A + FD+M L+PD Y +I+
Sbjct: 361 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 420
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ L+ EL+ EM+EK D TY+ + + E ++Y++MI+ + P
Sbjct: 421 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 480
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T M+MK + + ++G +W +I +G CP ++ +L+ GL G+ EA
Sbjct: 481 SIHTFNMIMKSYFMARNYEMGSAVWDEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 540
Query: 446 KQML 449
++ML
Sbjct: 541 EEML 544
>gi|11079489|gb|AAG29201.1|AC078898_11 hypothetical protein [Arabidopsis thaliana]
Length = 481
Score = 161 bits (408), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 114/486 (23%), Positives = 233/486 (47%), Gaps = 19/486 (3%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIERITRIIND--HPFPDQPLHPTLLQHLPQTTPL 64
+ R +F S A L+S++ Q ++ + + I+ P L L Q +
Sbjct: 6 INRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQ---SGLRV 62
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S +VE+VL R A GL FF+++ + H+ + A+ + A++R + W+
Sbjct: 63 SQEVVEDVLNRFRNA---GLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWD 119
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L++ +++ +L +++ I++ + ++ Q +E + AF+ ME+ FN L
Sbjct: 120 LINAMRK--KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPP----NLVAFNGL 173
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
L A C K +++A+ VF + RF P++KT +ILL G+ + ++ + EM+ G
Sbjct: 174 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 233
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P +VTY+I +D CK G +A+ + M+ C P+ + L+H G + +A
Sbjct: 234 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 293
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F EM + +K D+ +N++I + + + ++ EM+ K + ++ + + + L++
Sbjct: 294 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 353
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ +MI+ P T M++K FC ++ +W Y+ +G P H
Sbjct: 354 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 412
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+L+ GLC ++A ++M+ + S ++ L++ L++ E+ ED+ + +
Sbjct: 413 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIK----EEREDVLKFLN 468
Query: 485 NLQAVL 490
VL
Sbjct: 469 EKMNVL 474
>gi|334183972|ref|NP_177860.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806398|sp|Q9FVX2.2|PP129_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g77360, mitochondrial; Flags: Precursor
gi|332197848|gb|AEE35969.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 517
Score = 161 bits (408), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 111/476 (23%), Positives = 229/476 (48%), Gaps = 15/476 (3%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIERITRIIND--HPFPDQPLHPTLLQHLPQTTPL 64
+ R +F S A L+S++ Q ++ + + I+ P L L Q +
Sbjct: 42 INRQSRFCCKSFLSARLYSSSEQVRDVADVAKNISKVLMSSPQLVLDSALDQ---SGLRV 98
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S +VE+VL R A GL FF+++ + H+ + A+ + A++R + W+
Sbjct: 99 SQEVVEDVLNRFRNA---GLLTYRFFQWSEKQRHYEHSVRAYHMMIESTAKIRQYKLMWD 155
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L++ +++ +L +++ I++ + ++ Q +E + AF+ ME+ FN L
Sbjct: 156 LINAMRK--KKMLNVETFCIVMRKYARAQKVDEAIYAFNVMEKYDLPP----NLVAFNGL 209
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
L A C K +++A+ VF + RF P++KT +ILL G+ + ++ + EM+ G
Sbjct: 210 LSALCKSKNVRKAQEVFENMRDRFTPDSKTYSILLEGWGKEPNLPKAREVFREMIDAGCH 269
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P +VTY+I +D CK G +A+ + M+ C P+ + L+H G + +A
Sbjct: 270 PDIVTYSIMVDILCKAGRVDEALGIVRSMDPSICKPTTFIYSVLVHTYGTENRLEEAVDT 329
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F EM + +K D+ +N++I + + + ++ EM+ K + ++ + + + L++
Sbjct: 330 FLEMERSGMKADVAVFNSLIGAFCKANRMKNVYRVLKEMKSKGVTPNSKSCNIILRHLIE 389
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ +MI+ P T M++K FC ++ +W Y+ +G P H
Sbjct: 390 RGEKDEAFDVFRKMIKV-CEPDADTYTMVIKMFCEKKEMETADKVWKYMRKKGVFPSMHT 448
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
+L+ GLC ++A ++M+ + S ++ L++ L++ + L+ L+
Sbjct: 449 FSVLINGLCEERTTQKACVLLEEMIEMGIRPSGVTFGRLRQLLIKEEREDVLKFLN 504
>gi|15228767|ref|NP_191806.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75181319|sp|Q9LZP3.1|PP293_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g62470, mitochondrial; Flags: Precursor
gi|7340718|emb|CAB82961.1| putative protein [Arabidopsis thaliana]
gi|34365579|gb|AAQ65101.1| At3g62470 [Arabidopsis thaliana]
gi|332646835|gb|AEE80356.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 599
Score = 161 bits (407), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 203/424 (47%), Gaps = 12/424 (2%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
++T E+ER+ ++I++ D+ + L + LS L+ VL R A
Sbjct: 124 SSTNPEEVERVCKVIDELFALDRNMEAVLDE---MKLDLSHDLIVEVLERFRHARK---P 177
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FF + + F + + ILA+ R F+ ++ + LLT+++ +I
Sbjct: 178 AFRFFCWAAERQGFAHDSRTYNSMMSILAKTRQFETMVSVLEEM--GTKGLLTMETFTIA 235
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + ++ + F+ M++ F K G E N LL + K KEA+ +F KL
Sbjct: 236 MKAFAAAKERKKAVGIFELMKKYKF----KIGVETINCLLDSLGRAKLGKEAQVLFDKLK 291
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
RF PN T +LL G+ ++ +++M+ +G +P +V +N+ ++G + D
Sbjct: 292 ERFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDQGLKPDIVAHNVMLEGLLRSRKKSD 351
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A++LF M+ P++++ T +I ++ A + FD+M L+PD Y +I+
Sbjct: 352 AIKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLIT 411
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ L+ EL+ EM+EK D TY+ + + E ++Y++MI+ + P
Sbjct: 412 GFGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHATRIYNKMIQNEIEP 471
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T M+MK + + ++G +W +I +G CP ++ +L+ GL G+ EA
Sbjct: 472 SIHTFNMIMKSYFMARNYEMGRAVWEEMIKKGICPDDNSYTVLIRGLIGEGKSREACRYL 531
Query: 446 KQML 449
++ML
Sbjct: 532 EEML 535
>gi|224128340|ref|XP_002320305.1| predicted protein [Populus trichocarpa]
gi|222861078|gb|EEE98620.1| predicted protein [Populus trichocarpa]
Length = 540
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 119/466 (25%), Positives = 219/466 (46%), Gaps = 20/466 (4%)
Query: 23 LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSN 82
+ +T +E+ ++ ++I++ D + L + LS LV VL R A
Sbjct: 66 IVKSTADPAEVHKVCKVIDELFALDHNMEAVLDEC---GINLSHDLVIEVLERFRHARK- 121
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
A FF + + P F + + ILA+ R F+ ++ + LLTL +
Sbjct: 122 --PAFRFFCWAAEKPGFVHDSRTYHSMMIILAKARQFETMMSMLEEMGEKR--LLTLDTF 177
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI + + + ++ + F+ M+ + + G E N LL + K KEA+++F
Sbjct: 178 SIAMRAFAAAKERKKAVGIFELMKNHKY----RVGVETINALLDSLGRAKLGKEAQALFG 233
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
KL RF PN +T +LL G+ ++ ++EM+ GF+P +VT+NI ++G +
Sbjct: 234 KLEGRFTPNLRTYTVLLNGWCRVKNLMEAGRIWNEMLDEGFKPDIVTHNIMLEGLLRSKK 293
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA++ FE M+ P +++ T LI + +A F EM PD Y
Sbjct: 294 RSDAIKFFEVMKAKGPSPDVRSYTILIRDLCKQTKMKEAVGYFYEMVDSGCHPDAAVYTC 353
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCKLYDRMIEG 381
+++ + ++ EL+ EM+EK D TY+ + LM S + + ++Y +MI+
Sbjct: 354 LMTGYGNHKRMDMVYELLKEMKEKGCPPDGKTYNAL-IKLMTSQRMPDDAVRIYKKMIQN 412
Query: 382 KFVPKTRTVVMLMKFFCVNFRV---DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
P + M+MK + FR+ ++G +W + +GFCP ++ + + GL S+GR
Sbjct: 413 GIEPSIHSYNMIMKSY---FRIRNYEMGHAVWDEMSKKGFCPDDNSYTVFIGGLISQGRS 469
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
EEA + ++M+ + + + Y +A + LE+L + +K
Sbjct: 470 EEACKYLEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELAQKMK 515
>gi|356534319|ref|XP_003535704.1| PREDICTED: pentatricopeptide repeat-containing protein At1g71060,
mitochondrial-like [Glycine max]
Length = 507
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 121/461 (26%), Positives = 219/461 (47%), Gaps = 17/461 (3%)
Query: 14 PGISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVL 73
P + LA + + + E I RI++ P L +P S LV VL
Sbjct: 39 PSKTHTLAFHTAQPRPTPDAEAICRILSTTP---ASTVDACLAAVPAKP--SPELVLEVL 93
Query: 74 GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH 133
+L A G+ AL FF++ + F T +AF + L ++R F W L++ +++
Sbjct: 94 NKLSNA---GVLALSFFRWAEKQSEFKHTTEAFHALIEALGKIRQFKMIWTLVNDMKQR- 149
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
LLT + S++ R ++ + +E ++ F++ME G++ S+ FN L+ C K
Sbjct: 150 -KLLTSDTFSLVARRYARARKAKEAIKTFEKMEH---YGLKPHVSD-FNKLVDVLCKSKS 204
Query: 194 MKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
++EA VF K+ R P+ K+ ILL G+ + ++ + EM +GF+ VV Y I
Sbjct: 205 VEEAHEVFDKMRKLRLDPDIKSYTILLEGWSQQQNLIKVNEVCREMEDKGFQLDVVAYGI 264
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
++ +CK F +A+ L+ EM+ PS TLI+G G + + +A + F+
Sbjct: 265 IMNAHCKAKKFDEAIGLYHEMKARGVRPSPHVYCTLINGLGSDKRLDEALEFFEVSKASG 324
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
P+ YNA++ + ++ A ++ EM++ IG ++ T+ + L+K +E
Sbjct: 325 FVPEAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRTFDIVLHHLIKGRRIEEAS 384
Query: 373 KLYDRMIEGKF--VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
++ RM G+F P T ++++ FC +D+ + +W + +G P H LV
Sbjct: 385 SVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDEMKGKGILPGMHMFSTLVC 444
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
LC + +EA + ++ML + + L+ LV A
Sbjct: 445 ALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALVDAG 485
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 81/186 (43%), Gaps = 12/186 (6%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKT 214
+E LE F+ + FV + +N ++ A+C M +A R V PN++T
Sbjct: 311 DEALEFFEVSKASGFVP----EAPTYNAVVGAYCWSLRMDDAYRMVGEMKKCGIGPNSRT 366
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLR--GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+I+L + + + M G PSV TY I + +C + A+ +++E
Sbjct: 367 FDIVLHHLIKGRRIEEASSVFRRMNGGEFGCEPSVSTYEIMVRMFCNEELLDMAVAVWDE 426
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ LP + +TL+ + +A + F EM ++P ++ + +L+
Sbjct: 427 MKGKGILPGMHMFSTLVCALCHESKLDEACKYFQEMLDVGIRPPAKMFSTLKEALV---- 482
Query: 333 LNAAME 338
+A ME
Sbjct: 483 -DAGME 487
>gi|225443015|ref|XP_002267278.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Vitis vinifera]
Length = 624
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 113/418 (27%), Positives = 192/418 (45%), Gaps = 11/418 (2%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
++ + S I I+RI++D P L L + TP LVE VL R + G
Sbjct: 42 NSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITP---GLVEQVLKR---CKNLGF 95
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
A FF + + P F + +++ + IL + F W+ +S ++ T + + +
Sbjct: 96 SAHRFFLWAKRLPGFEHSKESYHILVDILGSSKQFPLIWDFLSDMRETRCCEICPEIFWL 155
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ + + + AF +M G+ K G + + LL C +K +K+A+ F K+
Sbjct: 156 IFRAYCRANLPGDAIRAFHQMGD---FGV-KAGVGDVDQLLYVLCKRKHVKQAQEFFDKV 211
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
PN KT +IL+ G+ + GD + + EM RG VV YN ++ CK G
Sbjct: 212 NVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKGGNVD 271
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A +LF EM P + + I V +IH A Q+ D M + NL P++ YN ++
Sbjct: 272 EAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTYNCIV 331
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A +L+DEM E+ + D +Y+ + + +L RM + +
Sbjct: 332 KKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEKENCM 391
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
P T M++K R D ++WG + +RGF P ++V G C +G+ EEA
Sbjct: 392 PDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLEEA 449
>gi|18394846|ref|NP_564110.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174883|sp|Q9LN22.1|PPR54_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g20300, mitochondrial; Flags: Precursor
gi|9558596|gb|AAF88159.1|AC026234_10 Contains similarity to a hypothetical protein T3P18.15 gi|5454201
from Arabidopsis thaliana BAC T3P18 gb|AC005698 and
contains multiple PPR PF|01535 repeats [Arabidopsis
thaliana]
gi|17386104|gb|AAL38598.1|AF446865_1 At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|15450347|gb|AAK96467.1| At1g20300/F14O10_8 [Arabidopsis thaliana]
gi|332191838|gb|AEE29959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 537
Score = 160 bits (405), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/480 (25%), Positives = 233/480 (48%), Gaps = 29/480 (6%)
Query: 26 TTTQSSEIERITRIINDH--PFPDQP----LHPTLLQHL-------PQTTPLSSTLVENV 72
T + +E+ II DH P P L+P+L H +T+ +S ++V V
Sbjct: 58 TPEDTQTVEKFHSIIKDHYRKNPTSPNDAILNPSLTLHALSLDFSQIETSQVSPSVVRCV 117
Query: 73 LGRLFAAHSNGL---KALEFFKFTLQ---HPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
+ + + +G+ ++L FF + + H +P P + + + + ++R FD AW L+
Sbjct: 118 IEKCGSVR-HGIPLHQSLAFFNWATSRDDYDHKSPHP--YNEMIDLSGKVRQFDLAWHLI 174
Query: 127 SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
+ ++ +++++ +I++ R + E + F+RME V + F++++
Sbjct: 175 D-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVPDKI----AFSIVIS 229
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
++ EA+S F L RF P+ L+ G+ +G+++ E + EM L G P+
Sbjct: 230 NLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKEMKLAGIEPN 289
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
V TY+I ID C+ G A +F +M C P+ T L+ + Q+++
Sbjct: 290 VYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRTEKVLQVYN 349
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M K +PD YN +I + R +L A+++++ M +K+ + T++T+F + K
Sbjct: 350 QMKKLGCEPDTITYNFLIEAHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYIEKKR 409
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ G ++Y +M+E K P T T +LM+ F + D+ L + + D+ P+ +
Sbjct: 410 DVNGAHRMYSKMMEAKCEPNTVTYNILMRMFVGSKSTDMVLKMKKEMDDKEVEPNVNTYR 469
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS-YRMLQRYLVQANANEKLEDL-DRMIK 484
LLVT C G W A++ K+M+ + S Y M+ L +A +K E+L ++MI+
Sbjct: 470 LLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVEKMIQ 529
>gi|255565671|ref|XP_002523825.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536913|gb|EEF38551.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 528
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 114/441 (25%), Positives = 210/441 (47%), Gaps = 22/441 (4%)
Query: 21 ALLFSTTTQSSEIERITRIINDH-------PFPDQPLHPTLL--QHLPQTTPLSSTLVEN 71
+L F TT +++ + I DH P+ P H L H T+P+S +LV +
Sbjct: 53 SLSFEETTLANKFHSL---IKDHHRRNPNFSLPNTPSHSLSLDFSHF-STSPVSPSLVSH 108
Query: 72 VLGRLFAAHSNGL---KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH 128
V+ + AA +G+ +AL FF + P FT P+ + + + + ++R FD W+++
Sbjct: 109 VIEKC-AAVRHGIPFFQALSFFNWATSRPGFTHHPEPYNEMIDLAGKVRNFDLGWQVID- 166
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
+ + +++++ SI++ R + E + AF+RME K F++L+
Sbjct: 167 LMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYNC----KPDKIAFSILISIL 222
Query: 189 CTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
C ++ EA+S F L +F P+ L+ G+ +G++ E + EM + G P+V
Sbjct: 223 CRKRRATEAQSFFDSLKDKFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVY 282
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I ID C+ G A +F EM V C P+ T L+ + Q++++M
Sbjct: 283 TYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQM 342
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ PD YN +I S + +L+ A+++++ M +K + T++ +F + K +
Sbjct: 343 KRMGCPPDTVTYNFLIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDV 402
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
G +LY +M E K T T +LM+ F D+ L L + + P+ + +L
Sbjct: 403 NGAHRLYAKMKELKCKANTVTYNILMRMFVDTKSTDMVLKLKKEMDEDDVEPNVNTYCVL 462
Query: 429 VTGLCSRGRWEEAFECSKQML 449
+ C G W A++ ++M+
Sbjct: 463 IAMYCGMGHWNNAYKFFREMV 483
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/269 (20%), Positives = 117/269 (43%), Gaps = 1/269 (0%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T +IL+ + +G + ++ M +P + ++I I C+K +A F+
Sbjct: 178 ETFSILIRRYVRAGLASEAVHAFNRMEDYNCKPDKIAFSILISILCRKRRATEAQSFFDS 237
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
++ P + T L+ G NI +A ++F EM P++ Y +I +L RC
Sbjct: 238 LKD-KFEPDVIVYTNLVRGWCRAGNIPEAERVFTEMKVAGCMPNVYTYTIVIDALCRCGQ 296
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A ++ EM + +++T++ + +K+ E V ++Y++M P T T
Sbjct: 297 ITRAHDVFAEMLDVGCEPNSITFNNLLRVHVKAGRTEKVLQVYNQMKRMGCPPDTVTYNF 356
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L++ C + +D L + ++ +G P+ + L + A +M +
Sbjct: 357 LIESHCKDGNLDEALKVLNSMVKKGCSPNASTFNGLFGSIAKLRDVNGAHRLYAKMKELK 416
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ + +Y +L R V + + + L +
Sbjct: 417 CKANTVTYNILMRMFVDTKSTDMVLKLKK 445
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/207 (20%), Positives = 86/207 (41%), Gaps = 3/207 (1%)
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
+I AG VRN Q+ D M RN++ I ++ +I +R + A+ + ME+
Sbjct: 148 MIDLAGKVRNFDLGWQVIDLMKARNVEISIETFSILIRRYVRAGLASEAVHAFNRMEDYN 207
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
D + + + L + +D + + KF P L++ +C +
Sbjct: 208 CKPDKIAFSILISILCRKRRATEAQSFFDSL-KDKFEPDVIVYTNLVRGWCRAGNIPEAE 266
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ + G P+ + +++ LC G+ A + +ML + + ++ L R
Sbjct: 267 RVFTEMKVAGCMPNVYTYTIVIDALCRCGQITRAHDVFAEMLDVGCEPNSITFNNLLRVH 326
Query: 468 VQANANEKLEDLDRMIKNLQAVLPPPT 494
V+A EK+ + +K + PP T
Sbjct: 327 VKAGRTEKVLQVYNQMKRMGC--PPDT 351
>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 1164
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 177/370 (47%), Gaps = 10/370 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
+TP ++ ++ R D+ W+L+ +++ P+ T S+ +L RI K E
Sbjct: 700 YTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAE 759
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E AF M I GI + + L+ FC + +++ A F ++ SR P+ T
Sbjct: 760 E---AFSEM---IGQGILP-DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 812
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++ GF + GD+ +HEM+ RG P ++T+ ++GYCK G DA R+ M +
Sbjct: 813 TAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQ 872
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P++ T TTLI G ++ A +L EM K L+P+I YN++++ L + ++
Sbjct: 873 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 932
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A++L+ E E + D VTY T+ KS ++ ++ M+ P T +LM
Sbjct: 933 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMN 992
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ ++ G L +++ +G P+ + LV C R + A K M R +
Sbjct: 993 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEP 1052
Query: 456 SEASYRMLQR 465
+Y L +
Sbjct: 1053 DGKTYENLVK 1062
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/358 (22%), Positives = 155/358 (43%), Gaps = 6/358 (1%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+L++ S ++ L+R+SK + T R E+ V + +N+++ C +
Sbjct: 630 VLSVDSCNVYLARLSKDCNKTATAIIVFREFPEVGVC---WNVASYNIVIHFVCQLGRIN 686
Query: 196 EARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EA + + + L + P+ + + ++ G+ G++ + +M +G +P+ TY I
Sbjct: 687 EAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSII 746
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C+ +A F EM LP TTL+ G +I A + F EM R++
Sbjct: 747 GLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDIT 806
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ Y A+IS + D+ A +L EM + + D +T+ + G K+ ++ ++
Sbjct: 807 PDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRV 866
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++ MI+ P T L+ C +D L + G P+ + +V GLC
Sbjct: 867 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 926
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL--DRMIKNLQAVL 490
G EEA + + +Y L ++ +K +++ + + K LQ +
Sbjct: 927 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTI 984
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/290 (22%), Positives = 122/290 (42%), Gaps = 14/290 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEE 157
+P + + L + D A EL+ + + P++ T S+ ++ + K + EE
Sbjct: 876 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSI---VNGLCKSGNIEE 932
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
++ E G+ + + L+ A+C EM +A+ + ++L + P T N
Sbjct: 933 AVKLVGEFEA---AGLNA-DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFN 988
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L+ GF G + E + M+ +G P+ T+N + YC + A ++++M
Sbjct: 989 VLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSR 1048
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P +T L+ G RN+ +A LF EM + + Y+ +I + + A
Sbjct: 1049 GVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEA 1108
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL--EGVCKLYDRMIEGKFV 384
E+ D+M + D + FF K G + + D +IE V
Sbjct: 1109 REIFDQMRRDGLAADKEIFD--FFSDTKYKGKRPDTIVDPIDEIIENYLV 1156
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/218 (21%), Positives = 87/218 (39%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + ++ A + ++ PN T N ++ G +SG++ E
Sbjct: 882 YTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 941
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G VTY +D YCK G A + EM P++ T L++G L +
Sbjct: 942 AAGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLE 1001
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L + M + + P+ +N ++ +L AA + +M + + D TY +
Sbjct: 1002 DGEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLV 1061
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
G + ++ L+ M F T +L+K F
Sbjct: 1062 KGHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGF 1099
>gi|147862837|emb|CAN78368.1| hypothetical protein VITISV_028672 [Vitis vinifera]
Length = 927
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 115/460 (25%), Positives = 210/460 (45%), Gaps = 12/460 (2%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
++ E+ R+ R+I++ D+ + L + LS LV VL R A
Sbjct: 197 NSGADPEEVSRVCRVIDELFALDRNMEAVLDE---CNVDLSHALVVGVLERFKHARK--- 250
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
A FF + Q FT + + +L R R F+ ++ + LLT+++ SI
Sbjct: 251 PAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEK--GLLTMETFSI 308
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ + + ++ + F+ M+R F G + N LL K KEA+++F KL
Sbjct: 309 AIKAFAAAKERKKAVGVFELMKRYNF----DAGVDTINCLLDNLGRAKLGKEAQALFEKL 364
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF PN +T +LL G+ ++ ++EM+ +GF+P ++ ++ ++G K
Sbjct: 365 EDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKS 424
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA++LFE M+ P+++T T LI + +A + FDEM +PD Y +I
Sbjct: 425 DAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMKEAVEYFDEMVDSGCQPDAAVYTCLI 484
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + ++ L+ EM+EK D TY+ + + + ++Y +MI+
Sbjct: 485 TGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQ 544
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T M+MK + ++G +W + +G CP ++ + + GL GR EEA
Sbjct: 545 PTLHTYNMMMKSYFYTRNYEMGCAVWKEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRY 604
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
++M+ + + + Y +A + LE+L R +K
Sbjct: 605 LEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMK 644
>gi|449469288|ref|XP_004152353.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 159 bits (401), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 21/415 (5%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRL----FAAHSNGLKALE 88
+ I+RI++D P L L ++ +S+ LVE VL R F+AH
Sbjct: 51 VSEISRILSDRRNPHHDLEVGLSSF---SSNVSTDLVEQVLKRCKNIAFSAH-------R 100
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P F P+ D++ + IL F W+ + ++ T S++T + + +
Sbjct: 101 FFLWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIEIRETRSSVITHELFWHVFTA 160
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF 208
S+ ++ + AF+RM GIR G ++ + LL C +K + A+ F K+ S F
Sbjct: 161 YSRADLPQDAIRAFNRMGE---FGIRA-GVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVF 216
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ KT +IL G+ GD + + EM RG V+ YN ++ CK G +A +
Sbjct: 217 NPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYK 276
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+F EM+ P T + I + ++H ++ + ++NL P++ YN +I L
Sbjct: 277 MFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLC 336
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ +++ A +++DEM E+ + D +Y+ + S + L RM K VP
Sbjct: 337 KDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKH 396
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW--EEA 441
T M++K R D +W + RGF P +++ G C + +W EEA
Sbjct: 397 TYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKK-KWKLEEA 450
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 117/290 (40%), Gaps = 7/290 (2%)
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI---RIDG 256
++ K + F P++ + +I++ SG + F E +R R SV+T+ +
Sbjct: 103 LWAKRIPGFEPSDDSYHIVVDILGSSGQFAILWDFLIE--IRETRSSVITHELFWHVFTA 160
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y + DA+R F M + + L++ +++ A+Q FD++ K P
Sbjct: 161 YSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKV-KSVFNPS 219
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ Y+ + D N A ++ DEM E+ D + Y+++ L K + K++
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M P T + ++ C + + + P+ + ++ LC
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMIKN 485
EEA++ +M+ R SY +Q Y + N L + RM ++
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRD 389
>gi|255548471|ref|XP_002515292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545772|gb|EEF47276.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 158 bits (400), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 111/461 (24%), Positives = 218/461 (47%), Gaps = 12/461 (2%)
Query: 24 FSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
+++ E++R+ ++I++ D+ + L + LS LV +VL R A
Sbjct: 56 INSSADPVEVDRVCKVIDELFALDRNMEAVLDEC---GINLSHDLVIDVLERFCHARK-- 110
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
A FF + + F + + ILA+ R F+ ++ + +LT+ + S
Sbjct: 111 -PAFRFFCWAGEKQGFEHDSRTYNSMMSILAKTRQFETVVSMLEEM--GGKGVLTMDTFS 167
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I + + + ++ + F+ M++ + K G E N LL + K KEA+++F
Sbjct: 168 IAMRAFAAAKERKKAVAMFELMKKYNY----KVGVETINHLLDSLGRAKLGKEAQALFEN 223
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L RF PN +T +LL G+ + ++ ++EM+ +GF+P +V +NI ++G +
Sbjct: 224 LKGRFTPNLRTYTVLLNGWCKVKNLMEAGSVWNEMIDKGFKPDIVAHNIMLEGLLRSKQR 283
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA++LF M+ P +++ T LI + +A + F EM KPD Y +
Sbjct: 284 SDAIKLFMVMKAKGPSPDVRSYTILIRYLCRQSKMEEAVEYFQEMIDSGCKPDAAVYTCL 343
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ + ++ +L+ EM+E+ D +TY+ + + + + ++Y +M +
Sbjct: 344 ITGFGNRKRMDMVYDLLKEMKEEGCPPDGLTYNALIKLMTRLKMPDDAARIYKKMTQSGI 403
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T M+MK + ++G +W + +GFCP ++ +L+ GL S+GR EA +
Sbjct: 404 EPTIHTYNMIMKSYFQTRNYEMGRAVWDEMSRKGFCPDDNSYTVLIGGLISQGRSGEACK 463
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
++ML + + + Y L + + LE+L + +K
Sbjct: 464 YLEEMLEKGMKAPQLDYNKFGADLSRGGNPDILEELAQRLK 504
>gi|356541430|ref|XP_003539180.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Glycine max]
Length = 492
Score = 158 bits (399), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 109/387 (28%), Positives = 189/387 (48%), Gaps = 16/387 (4%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQH-PHFTPTPDAFEKTLHILARMRYFDQAWELM 126
LV L RL+ ++G KAL FFK +H P +T +P +F+ + I ARMR F+ AW L+
Sbjct: 68 LVNKTLKRLW---NHGPKALLFFKHLDRHLPSYTHSPSSFDHAVDIAARMRDFNSAWALV 124
Query: 127 SHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
++ R PS K+++I+ R + + F M G+ + FN L
Sbjct: 125 GRMRSLRLGPSP---KTLAILAERYASIGKPHRAVRTFLSMHEH---GLHQ-DLHSFNTL 177
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
L C ++ A + L SRF P+ + NIL G+ EMV RG
Sbjct: 178 LDILCKSNRVETAHDLLRTLKSRFRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIE 237
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P++VTYN + GY + +A + EM++ C + + TT+IHG G + +A+++
Sbjct: 238 PTMVTYNTMLKGYFRSNQIKEAWEFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRV 297
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN-VTYHTMFFGLM 363
FDEM K + P++ YNA+I + + A+ + +EM + + N VT++ + GL
Sbjct: 298 FDEMVKEGVAPNVATYNALIQVFCKKDSVQNAVAVFEEMVREGVCSPNVVTFNVVIRGLC 357
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC-PHG 422
+E +RM E +T +++++FC ++ GL ++G + D G C P+
Sbjct: 358 HVGDMERALGFMERMGEHGLRASVQTYNVVIRYFCDAGEIEKGLEVFGKMGD-GLCLPNL 416
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
++L++ + R + E+ K ++
Sbjct: 417 DTYNVLISAMFVRKKSEDLVVAGKLLM 443
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 50/105 (47%), Gaps = 5/105 (4%)
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILL 219
A MER G+R + +NV+++ FC E+++ VF K+ PN T N+L+
Sbjct: 365 ALGFMERMGEHGLRA-SVQTYNVVIRYFCDAGEIEKGLEVFGKMGDGLCLPNLDTYNVLI 423
Query: 220 LGF---KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K+S D+ EMV RGF P T+N ++G G
Sbjct: 424 SAMFVRKKSEDLVVAGKLLMEMVERGFLPRKFTFNRVLNGLVITG 468
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 44/230 (19%), Positives = 88/230 (38%), Gaps = 39/230 (16%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F A L M + PS +T+ L + H+A + F M + L D+ ++N
Sbjct: 117 FNSAWALVGRMRSLRLGPSPKTLAILAERYASIGKPHRAVRTFLSMHEHGLHQDLHSFNT 176
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ L + + A +L+ R ++ +
Sbjct: 177 LLDILCKSNRVETAHDLL------------------------------------RTLKSR 200
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T + +L +C+ R + L + ++ RG P + ++ G + +EA+
Sbjct: 201 FRPDTVSYNILANGYCLKKRTPMALRVLKEMVQRGIEPTMVTYNTMLKGYFRSNQIKEAW 260
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLP 491
E +M R+ ++ SY + +A +K + + D M+K + V P
Sbjct: 261 EFYLEMKKRKCEIDVVSYTTVIHGFGEAGEVKKAKRVFDEMVK--EGVAP 308
>gi|449484422|ref|XP_004156879.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Cucumis sativus]
Length = 529
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/415 (26%), Positives = 193/415 (46%), Gaps = 21/415 (5%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRL----FAAHSNGLKALE 88
+ I+RI++D P L L ++ +S+ LVE VL R F+AH
Sbjct: 51 VSEISRILSDRRNPHHDLEVGLSSF---SSNVSTDLVEQVLKRCKNIAFSAH-------R 100
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P F P+ D++ + IL F W+ + ++ T S++T + + +
Sbjct: 101 FFLWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIEIRETRSSVITHELFWHVFTA 160
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF 208
S+ ++ + AF+RM GIR G ++ + LL C +K + A+ F K+ S F
Sbjct: 161 YSRADLPQDAIRAFNRMGE---FGIRA-GVDDLDKLLYTLCKRKHVAHAQQFFDKVKSVF 216
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ KT +IL G+ GD + + EM RG V+ YN ++ CK G +A +
Sbjct: 217 NPSVKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYK 276
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+F EM+ P T + I + ++H ++ + ++NL P++ YN +I L
Sbjct: 277 MFLEMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLC 336
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ +++ A +++DEM E+ + D +Y+ + S + L RM K VP
Sbjct: 337 KDQNVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRDKCVPDKH 396
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW--EEA 441
T M++K R D +W + RGF P +++ G C + +W EEA
Sbjct: 397 TYNMVLKLLVRVGRFDRANEVWESMGKRGFYPSVSTYAVMIHGFCKK-KWKLEEA 450
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/290 (20%), Positives = 117/290 (40%), Gaps = 7/290 (2%)
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI---RIDG 256
++ K + F P++ + +I++ SG + F E +R R SV+T+ +
Sbjct: 103 LWAKRIPGFEPSDDSYHIVVDILGGSGQFAILWDFLIE--IRETRSSVITHELFWHVFTA 160
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y + DA+R F M + + L++ +++ A+Q FD++ K P
Sbjct: 161 YSRADLPQDAIRAFNRMGEFGIRAGVDDLDKLLYTLCKRKHVAHAQQFFDKV-KSVFNPS 219
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ Y+ + D N A ++ DEM E+ D + Y+++ L K + K++
Sbjct: 220 VKTYSILTRGWGVVGDSNNAQKVFDEMRERGCLIDVLAYNSLLEALCKGGKRDEAYKMFL 279
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M P T + ++ C + + + P+ + ++ LC
Sbjct: 280 EMDSNGVDPDADTYSIFIRSSCQENDLHTVYRVLERTKRKNLLPNVFTYNCVIKKLCKDQ 339
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMIKN 485
EEA++ +M+ R SY +Q Y + N L + RM ++
Sbjct: 340 NVEEAYQILDEMIERGVTPDTWSYNAIQAYHCDHSEVNSALNLVKRMDRD 389
>gi|357444525|ref|XP_003592540.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355481588|gb|AES62791.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 507
Score = 158 bits (399), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 111/419 (26%), Positives = 202/419 (48%), Gaps = 17/419 (4%)
Query: 34 ERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFT 93
E I RI++ P + P+ +L + +P LV VL +L A G+ AL FF++
Sbjct: 59 ETICRILSTTP--ESPVDVSLRNFPVEVSP---ELVVAVLNKLSNA---GILALSFFRWA 110
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
+ F + F + L ++R F W L+ +++ LL + S++ R + +
Sbjct: 111 EKQQGFNHNTEIFHALIEALGKIRQFKMIWNLVDEMKQR--KLLNGDTFSLIARRYVRAK 168
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK-EMKEARSVFVKLLS-RFAPN 211
+E L+ F+RME+ G++ S+ FN L+ C K +++A+ +F K+ PN
Sbjct: 169 VIKEALKTFERMEK---YGLKPQISD-FNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPN 224
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
K+ IL+ G+ + ++ ++ EM GF+P VVTY I I+ YCK + +A+ ++
Sbjct: 225 LKSYTILIEGWSQQQNLLKVDEVCREMKDDGFQPDVVTYGIIINAYCKAKKYDEAIGIYH 284
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M PS T I G G + +A + F++ P+ YNA++S+
Sbjct: 285 DMLSKNVNPSPHIYCTFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSM 344
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTV 390
++ A ++ EM+E IG + TY + L+K + ++ RM E P T
Sbjct: 345 RIDDAYRIVGEMKELGIGPNARTYDIILVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTY 404
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++++ FC ++D+ + +W + D+G P H L+ LC + ++A +QML
Sbjct: 405 AIMVRMFCNENQLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQML 463
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 64/294 (21%), Positives = 126/294 (42%), Gaps = 20/294 (6%)
Query: 101 PTPDAFEKTLHILARMRY-FDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
P F K + +L + ++ ++A EL +++ + P+L KS +I++ S+ Q+ +
Sbjct: 187 PQISDFNKLIDVLCKSKFHVEKAQELFDKMRQWNLEPNL---KSYTILIEGWSQQQNLLK 243
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
E M+ + F + + +++ A+C K+ EA ++ +LS+ P+
Sbjct: 244 VDEVCREMKDDGF----QPDVVTYGIIINAYCKAKKYDEAIGIYHDMLSKNVNPSPHIYC 299
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+ G + F+ + GF P TYN + YC DA R+ EM+ +
Sbjct: 300 TFITGLGNGSRMDEAFEFFEKSKASGFPPEAPTYNAVVSAYCWSMRIDDAYRIVGEMKEL 359
Query: 277 ACLPSLQT----ITTLIHGAGLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCR 331
P+ +T + LI G +A +F M +P + Y M+
Sbjct: 360 GIGPNARTYDIILVHLIKGG----RTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNEN 415
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L+ AM + +EM++K I + T+ L + L+ C+ + +M++ P
Sbjct: 416 QLDMAMVVWNEMKDKGILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRP 469
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 82/190 (43%), Gaps = 3/190 (1%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNIL 218
EAF+ E+ G + +N ++ A+C + +A + ++ PN +T +I+
Sbjct: 313 EAFEFFEKSKASGFPP-EAPTYNAVVSAYCWSMRIDDAYRIVGEMKELGIGPNARTYDII 371
Query: 219 LLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ + G A +F G PSV TY I + +C + AM ++ EM+
Sbjct: 372 LVHLIKGGRTKEAYSVFQRMSSETGCEPSVSTYAIMVRMFCNENQLDMAMVVWNEMKDKG 431
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
LP + +TLI + A + F +M ++P ++A +L+ N +
Sbjct: 432 ILPGIHMFSTLIISLCHENKLDDACRYFQQMLDVGIRPTANMFSAFKRALMAAGMENTVI 491
Query: 338 ELMDEMEEKR 347
++++ R
Sbjct: 492 HFAKKVDKLR 501
>gi|255580124|ref|XP_002530894.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529547|gb|EEF31500.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 519
Score = 157 bits (398), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 197/410 (48%), Gaps = 11/410 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+RI++DH P L +L + ++ +S+TLVE VL R + G A FF +
Sbjct: 44 VNEISRILSDHRNPHHDLELSLTTY---SSHISTTLVEQVLKR---CKNLGFSAQRFFLW 97
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
+ P F + +++ + IL + F W+ + ++ + ++ + ++ S+
Sbjct: 98 AKRIPGFDHSKESYHILVDILGSSKQFALLWDFLIEIRESQDFEISPQVFWLVFRAYSRA 157
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
+ + AFDRM + G++ ++ + LL C +K K A+ +F ++ +F
Sbjct: 158 NLPSDAIRAFDRM---VEFGLKP-TIDDLDQLLYVLCKRKHAKHAQQIFDRVKHQFQTRA 213
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
KT +IL+ G+ + G+ + + EM + V+ YN ++ +CK G +A ++F E
Sbjct: 214 KTYSILVRGWGDIGESVSACKVFDEMREQQCAVDVLAYNSLLEAFCKGGKVSEAYKMFRE 273
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P T + I +IH A ++ DEM + +L P++ YN MI L +
Sbjct: 274 MGSNGIKPDACTFSIFIRAYCEANDIHLAYRVLDEMKRYDLVPNVFTYNCMIKKLCKKEK 333
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A +L++E+ E+ D +Y+ + + S + +L RM++ +P + M
Sbjct: 334 VEEAYQLLNEIIERSGQPDAWSYNAILAYHCEHSEVNSATRLISRMVKDNCLPDKHSYNM 393
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
L+K R D + +W + ++GF P ++V GLC +G+ EEA
Sbjct: 394 LLKLLIRVGRFDRAIEVWESMGEKGFYPSVSTYSVMVHGLCKKKGKLEEA 443
>gi|356561933|ref|XP_003549231.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g62470, mitochondrial-like [Glycine max]
Length = 510
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 119/451 (26%), Positives = 214/451 (47%), Gaps = 14/451 (3%)
Query: 32 EIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFK 91
E+ER+ ++I++ D+ + L + LS LV +VL R A A FF
Sbjct: 35 EVERVCKVIDELFALDRNMEVVLDEC---GVRLSHDLVVDVLQRFKHARK---PAFRFFC 88
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
+ P F + + +L R R F+ + + LLT+++ SI + ++
Sbjct: 89 XAGKRPGFAHDSRTYNFMMCVLGRTRQFETMVAKLEEM--GEKGLLTMETFSIAIKAFAE 146
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ ++ + FD M++ F K G + N LL + T K KEA++VF KL RF P+
Sbjct: 147 AKQRKKEVGIFDLMKKYGF----KVGVDVINFLLDSLSTAKLGKEAQAVFEKLKDRFTPS 202
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+T ILL G+ ++ ++EM+ RGF P +V +N+ ++G K DA++LFE
Sbjct: 203 LQTYTILLSGWCRLKNLLEAGRVWNEMIDRGFNPDIVAHNVMLEGLLKCKKKSDAIKLFE 262
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M+ P++++ T +I + + +A + FD M R +PD Y +I+ R +
Sbjct: 263 IMKAKGPSPNVRSYTIMIQDFCKQKLMGEAIEYFDVMVDRGCQPDAALYTCLITGFGRQK 322
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTV 390
++ L+ EM E+ D TY+ + LM S + + ++Y +MI+ P T
Sbjct: 323 KMDMVYSLLKEMRERGCPPDGRTYNAL-IKLMTSQHMPDDAVRIYKKMIQSGIKPTIHTY 381
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
M+MK + V ++G +W + +G CP ++ + + GL + R EA + ++ML
Sbjct: 382 NMIMKSYFVTKNYEMGHEIWDEMHPKGCCPDDNSYIVYIGGLIRQDRSGEACKYLEEMLE 441
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ + + Y + + LE+L R
Sbjct: 442 KGMKALKLDYNKFASDISKTGNAVILEELAR 472
>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
thaliana]
Length = 1184
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 170/356 (47%), Gaps = 10/356 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
+TP ++ ++ R D+ W+L+ ++R P+ S+ +L RI K E
Sbjct: 720 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 779
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E AF M R+ GI + + L+ FC + +++ A F ++ SR P+ T
Sbjct: 780 E---AFSEMIRQ---GILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 832
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++ GF + GD+ +HEM +G P VT+ I+GYCK G DA R+ M +
Sbjct: 833 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 892
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P++ T TTLI G ++ A +L EM K L+P+I YN++++ L + ++
Sbjct: 893 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 952
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A++L+ E E + D VTY T+ KS ++ ++ M+ P T +LM
Sbjct: 953 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 1012
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
FC++ ++ G L +++ +G P+ + LV C R + A K M R
Sbjct: 1013 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 1068
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 6/358 (1%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+L++ S ++ L+R+SK T R E+ V + +N+++ C +K
Sbjct: 650 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC---WNVASYNIVIHFVCQLGRIK 706
Query: 196 EARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EA + + + L + P+ + + ++ G+ G++ + M +G +P+ Y I
Sbjct: 707 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 766
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C+ +A F EM R LP TTLI G +I A + F EM R++
Sbjct: 767 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 826
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ Y A+IS + D+ A +L EM K + D+VT+ + G K+ ++ ++
Sbjct: 827 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 886
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++ MI+ P T L+ C +D L + G P+ + +V GLC
Sbjct: 887 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 946
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL--DRMIKNLQAVL 490
G EEA + + +Y L ++ +K +++ + + K LQ +
Sbjct: 947 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTI 1004
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/327 (22%), Positives = 135/327 (41%), Gaps = 17/327 (5%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
P S T E + G A H A +Q +P + + L + D A
Sbjct: 862 PDSVTFTELINGYCKAGHMK--DAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 918
Query: 123 WELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
EL+ + + P++ T S+ ++ + K + EE ++ E G+ +
Sbjct: 919 NELLHEMWKIGLQPNIFTYNSI---VNGLCKSGNIEEAVKLVGEFEA---AGLNA-DTVT 971
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C EM +A+ + ++L + P T N+L+ GF G + E + M+
Sbjct: 972 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 1031
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ T+N + YC + A ++++M P +T L+ G RN+
Sbjct: 1032 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 1091
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM + + Y+ +I ++ + A E+ D+M + + D + F
Sbjct: 1092 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD--F 1149
Query: 360 FGLMKSSGL--EGVCKLYDRMIEGKFV 384
F K G + + D +IE V
Sbjct: 1150 FSDTKYKGKRPDTIVDPIDEIIENYLV 1176
>gi|225447826|ref|XP_002268129.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Vitis vinifera]
Length = 679
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 114/460 (24%), Positives = 209/460 (45%), Gaps = 12/460 (2%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
++ E+ R+ R+I++ D+ + L + LS LV VL R A
Sbjct: 197 NSGADPEEVSRVCRVIDELFALDRNMEAVLDEC---NVDLSHALVVGVLERFKHARK--- 250
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
A FF + Q FT + + +L R R F+ ++ + LLT+++ SI
Sbjct: 251 PAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEK--GLLTMETFSI 308
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ + + ++ + F+ M+R F G + N LL K KEA+++F KL
Sbjct: 309 AIKAFAAAKERKKAVGVFELMKRYNF----DAGVDTINCLLDNLGRAKLGKEAQALFEKL 364
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF PN +T +LL G+ ++ ++EM+ +GF+P ++ ++ ++G K
Sbjct: 365 EDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKS 424
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA++LFE M+ P+++T T LI + +A + FDEM +PD Y +I
Sbjct: 425 DAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLI 484
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + ++ L+ EM+EK D TY+ + + + ++Y +MI+
Sbjct: 485 TGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQ 544
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
T M+MK + ++G +W + +G CP ++ + + GL GR EEA
Sbjct: 545 STLHTYNMMMKSYFYTRNYEMGCAVWEEMGRKGCCPDDNSYIVFIGGLIRHGRSEEACRY 604
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
++M+ + + + Y +A + LE+L R +K
Sbjct: 605 LEEMIEKGMKAPQLDYNKFAADFSRAGKPDILEELARKMK 644
>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 652
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 88/307 (28%), Positives = 162/307 (52%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + EA +F +++S+ +P+ T + L+ GF G + +++M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMI 287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L +P V T+NI ++ +CK G + +F+ M + P+ T +L+ G LV+ ++
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M + + PDI +Y+ MI+ + + + AM L EM K I D VTY ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L D+M + P RT ++ C +VD + L L D+G
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQ 467
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ + +L+ GLC G+ E+A + + +LV+ ++ +Y M+Q + V+ NE L
Sbjct: 468 PNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALAL 527
Query: 479 LDRMIKN 485
L +M N
Sbjct: 528 LSKMEDN 534
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 179/362 (49%), Gaps = 13/362 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + +++ ++A++L S + + P ++T ++ IS F +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL------ISGFCILGKL 276
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A D + I I+ FN+L+ AFC +MKE ++VF ++ + PN T N
Sbjct: 277 NDAIDLFNKMILENIKP-DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +V + ++ M G P + +Y+I I+G+CK F +AM LF+EM R
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T ++LI G I A QL D+M R + P I YN+++ +L + ++ A+
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ ++++K I + TY + GL +S LE K+++ ++ T ++++ F
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML---VRRRQ 454
CV + L L + D G P ++++ L + + A + ++M+ VR RQ
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575
Query: 455 VS 456
++
Sbjct: 576 IA 577
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 140/305 (45%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L + K + Y L +ME F GI+ N+L+ FC + A SVF K+
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKME---FRGIKP-NLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L + P+ T L+ G G + +F+ ++V GF ++Y I G CK G
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+ L + ++ P++ T+I V+ +++A LF EM + + PD+ Y+A+
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSAL 266
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS LN A++L ++M + I D T++ + K ++ ++D M++
Sbjct: 267 ISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM +C+ V+ +++ + G P + +++ G C +++EA
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 444 CSKQM 448
K+M
Sbjct: 387 LFKEM 391
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
F + ++ +A S+F +LL R P N +L +S + +M RG +P
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
++V NI I+ +C+ G A +F ++ ++ +P T TTLI G L I QA
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFH 178
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
D++ D +Y +I L + + AA++L+ ++ + + V Y+T+ + K
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ L+ MI P T L+ FC+ +++ ++L+ +I P +
Sbjct: 239 KLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTF 298
Query: 426 DLLVTGLCSRGRWEEA 441
++LV C G+ +E
Sbjct: 299 NILVNAFCKDGKMKEG 314
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 130/288 (45%), Gaps = 9/288 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ +I+++ K +E FD M ++ GI+ +N L+ +C KE+ +A+S+
Sbjct: 297 TFNILVNAFCKDGKMKEGKTVFDMMMKQ---GIKP-NFVTYNSLMDGYCLVKEVNKAKSI 352
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F + P+ ++ +I++ GF + + EM + P VVTY+ IDG K
Sbjct: 353 FNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSK 412
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A++L ++M P+++T +++ + + +A L ++ + ++P++
Sbjct: 413 SGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYT 472
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHD-NV-TYHTMFFGLMKSSGLEGVCKLYDR 377
Y+ +I L + L A ++ + + K GH+ NV TY M G L +
Sbjct: 473 YSILIKGLCQSGKLEDARKVFEGLLVK--GHNLNVDTYTIMIQGFCVEGLFNEALALLSK 530
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
M + +P +T +++ D+ L +I RG P A+
Sbjct: 531 MEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQIAI 578
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 34/186 (18%), Positives = 75/186 (40%), Gaps = 5/186 (2%)
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
++N H F+ +P + K + +Y++ ++ D++ A+ L + + +
Sbjct: 32 FLKNTH-----FNFIPYSSSKINFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAF 86
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
++ + L+KS V L +M P +L+ FC + +++ +
Sbjct: 87 EFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ G+ P L+ GLC +G+ ++AF +++ + SY L L +
Sbjct: 147 LKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 474 EKLEDL 479
DL
Sbjct: 207 RAALDL 212
>gi|225436259|ref|XP_002275952.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Vitis vinifera]
Length = 566
Score = 155 bits (393), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 128/461 (27%), Positives = 220/461 (47%), Gaps = 18/461 (3%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPL--SSTLVENVLGRLFAAHSN 82
S T E + RI++ P + +L++H ++ + SS LV VL R+ ++
Sbjct: 72 SDTNNGENGEFVRRIVDILQEPGSSM--SLVKHKLESCGVAASSELVVEVLSRV---RNH 126
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLK 140
A FF + + P + + A+ + IL +MR FD AW L+ ++ RT SL+T
Sbjct: 127 WEAAFTFFLWAAKQPGYAHSLRAYHSMISILGKMRKFDTAWALIDEMRGGRTGTSLVTPH 186
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++SIM+ R + + F ++ G+ G EEF LL A C K +++A +
Sbjct: 187 TLSIMIRRYCAVHDVGKAINTF-YAHKQFKFGV---GIEEFQNLLSALCRYKNVQDAEQL 242
Query: 201 FVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ F + K+ NI+L G+ G + E F+ EM RG + VV+Y+ I Y K
Sbjct: 243 LFCNRNVFPFDTKSFNIILNGWCNVIGSMREAERFWREMSNRGIQRDVVSYSSIISCYSK 302
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
++LF +M+ + P + ++H + +A L M + + PD
Sbjct: 303 VTNLNKVLKLFNQMKEMEIAPDRKVYNAVVHALAKASFVKEALNLMKAMEGKGIAPDSVT 362
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN++I L R R +N A E+ DEM ++ + TYH FF ++KS E V L ++M
Sbjct: 363 YNSLIKPLSRARKINEAKEVFDEMLQRGLSPTIRTYHA-FFRILKSG--EEVFMLLEKMK 419
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P T +ML++ FC ++D LW + + G P + +L+ GL G+ E
Sbjct: 420 ETGCHPDKDTYIMLIRRFCRWRQLDNVFKLWSEMSENGVGPDRSSYIVLIHGLFLNGKLE 479
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDL 479
EA++ +M ++ + MLQ ++ + A+ ++ DL
Sbjct: 480 EAYKYYIEMKEKQFLPEPKTEDMLQAWISGKETADVRMIDL 520
>gi|449454008|ref|XP_004144748.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
gi|449490811|ref|XP_004158714.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Cucumis sativus]
Length = 621
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 112/458 (24%), Positives = 208/458 (45%), Gaps = 16/458 (3%)
Query: 29 QSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALE 88
S+E+ R+ ++I++ D+ + L + LS LV VL R A A
Sbjct: 141 DSTEVNRVCKVIDELFALDRNMEAVLDEC---GVKLSHDLVLEVLARFKQARK---PAFR 194
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + Q P F + + IL + R F+ L+ + LLT+++ ++
Sbjct: 195 FFCWAAQKPGFAHDSKTYNTMMTILGKTRQFETMVSLLEEM--AEKELLTMETFTVCFKA 252
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF 208
+ + ++ + + M++ + K G E N LL + K KEA ++F KL RF
Sbjct: 253 FAAAKERKKAVGVLELMKKYKY----KVGVETINCLLDSLGRAKLGKEALTIFEKLHGRF 308
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY--CKKGCFGDA 266
PN +T +LL G+ ++ +++M+ F+P +V +N ++G CKK DA
Sbjct: 309 TPNLQTYTVLLNGWCRVRNLMEAGKIWNQMIDEDFKPDIVAHNTMLEGLLRCKKR--SDA 366
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
++LFE M+ P +++ T L+ + +A Q F+EM +PD Y +I+
Sbjct: 367 IKLFEVMKAKGPSPDVKSYTILVRDFCKQAKMKEAVQYFEEMQGAGCRPDAAIYTCLITG 426
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ ++ L+ EM+ D TY+ + + + ++Y +MIE P
Sbjct: 427 FGNQKRMDTVYGLLKEMKANGCPPDGKTYNALIKLMTNKRMPDDAVRIYKKMIENGIKPT 486
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T T M+MK + ++G+ W + +G CP ++ + + GL S GR EA + +
Sbjct: 487 THTYSMMMKSYFQTRNYEMGVAAWDEMKLKGCCPDDNSYTVFIGGLISLGRCAEAGKYLE 546
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+M+ + + + Y +A + LE+L + +K
Sbjct: 547 EMIEKGMKAPQLDYNKFAADFSRAGRPDILEELAQKMK 584
>gi|449494638|ref|XP_004159605.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 664
Score = 155 bits (392), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 195/433 (45%), Gaps = 24/433 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+ S L E VL R A + G + FF + + P + + + ++ + L +MR F W
Sbjct: 128 MRSGLPERVLSRCGDAGNLGYR---FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVW 184
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
L+ +++ +P +LT + +++ R + + ++ +E D M K+G E
Sbjct: 185 ALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMP--------KYGCEPDEY 236
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F LL A C +KEA S+F + RF PN + LL G+ G + + ++
Sbjct: 237 VFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIK 296
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P +V YN + GY + G DA L EM++V C P+ + T LI +
Sbjct: 297 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMD 356
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD--NVTYHT 357
+A ++F EM + D+ Y +IS + + + A E++D+M +K GHD ++Y
Sbjct: 357 EAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK--GHDPSQLSYLC 414
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ K LE +L + M + VP +++ C + + LWG + G
Sbjct: 415 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 474
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P L+V G S+G EA + K+M V R +S Y L+ EKLE
Sbjct: 475 LNPGLDTYILMVHGFLSQGCLVEACDYFKEM-VERGLLSAPQYGTLKELTNALLRAEKLE 533
Query: 478 DLDRMIKNLQAVL 490
M KN+ + +
Sbjct: 534 ----MAKNMWSCM 542
>gi|357467093|ref|XP_003603831.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355492879|gb|AES74082.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 530
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 184/370 (49%), Gaps = 13/370 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L++L FF + F +P+ + + + + ++R+FD AW L+ + ++ +T+ + S
Sbjct: 124 LQSLAFFNWATTLEGFPSSPEPYNEMIDLAGKLRHFDLAWHLID-LMKSRGVRITVSTFS 182
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARS 199
+++ R + E + AF+RME +G + F++++ + C ++ EA
Sbjct: 183 VLVRRYVRAGLAAEAVHAFNRME--------DYGCKPDKVSFSIVISSLCKKRRASEAEL 234
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F L +F P+ L+ G+ +GD+ E + +M G +P+V TY+I ID C+
Sbjct: 235 FFDSLKHKFEPDVIVYTSLVHGWCRAGDIAKAEEVFSDMKEAGVKPNVYTYSIVIDSLCR 294
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A +F EM C P+ T +L+ + Q++++M + D +
Sbjct: 295 CGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLQVYNQMKRLGCAADTIS 354
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I S + +L+ A++++D M +K + + T++++F + + + G ++Y +M
Sbjct: 355 YNFLIESHCKDENLDEAVKVLDTMVKKGVAPNASTFNSIFGCIAELHDVNGAHRMYAKMK 414
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E K +P T T +LM+ F + +D+ L L + + P+ + +L+ C +G W
Sbjct: 415 ELKCMPNTLTYNILMRMFADSKSIDMVLKLKKEMDESEVEPNVNTYRILILMFCEKGHWN 474
Query: 440 EAFECSKQML 449
A+ K+M+
Sbjct: 475 NAYNLMKEMV 484
>gi|255540805|ref|XP_002511467.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550582|gb|EEF52069.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 482
Score = 155 bits (392), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 116/425 (27%), Positives = 206/425 (48%), Gaps = 40/425 (9%)
Query: 25 STTTQSSEIERITRII---NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
+TTT E + +I + + LH +Q PQ LV +L RL+ +
Sbjct: 21 TTTTSPPEATTLAALILNSTNSQTLAESLHSPSIQWTPQ-------LVNTILKRLW---N 70
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTL 139
+G KAL FFK HP + +F+ + I AR+R F W L+S ++ R PS T
Sbjct: 71 HGPKALHFFKILSHHPSYCHQASSFDHAIDICARLRDFRTLWFLVSRMRSCRLGPSPRT- 129
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREI--FVGIRKFGS----EEFNVLLQAFCTQKE 193
F E A + R + F+ + ++G FN +L C K
Sbjct: 130 ------------FAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKR 177
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLGF---KESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ A ++F L +F + + NI++ G+ K + A+EM EMV RG P++ TY
Sbjct: 178 VEMAYNLFKALKGKFKADCVSYNIIVNGWCLIKRTPK--ALEML-KEMVERGLTPNLTTY 234
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI ++GY + G +A F EM++ C + T T++IHG G+V I +AR +F++M K
Sbjct: 235 NIMLNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVK 294
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ P + +NA+I L + + A+ + +EM ++ +++TY+ + GL ++
Sbjct: 295 DGVLPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQR 354
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+L +RM + P +T +L+++FC ++ GL+L+ + + P+ ++L+
Sbjct: 355 AMELMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGNGDCLPNLDTYNILIN 414
Query: 431 GLCSR 435
+ R
Sbjct: 415 SMFVR 419
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 129/282 (45%), Gaps = 7/282 (2%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P+ +T I+ + G + M G + ++N +D CK A
Sbjct: 122 RLGPSPRTFAIIAERYAAMGKPHRAVTVFMSMHEYGCFQDLSSFNTILDVLCKSKRVEMA 181
Query: 267 MRLFEEME---RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
LF+ ++ + C+ + +++G L++ +A ++ EM +R L P++ YN M
Sbjct: 182 YNLFKALKGKFKADCV----SYNIIVNGWCLIKRTPKALEMLKEMVERGLTPNLTTYNIM 237
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
++ R N A EM++++ D VTY ++ GL ++ ++++M++
Sbjct: 238 LNGYFRAGQTNEAWGFFLEMKKRKCDIDVVTYTSVIHGLGVVGEIKRARNVFNQMVKDGV 297
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T L++ C V+ + ++ ++ RG+ P+ +L++ GLC G + A E
Sbjct: 298 LPSVATFNALIQILCKKDSVENAILIFEEMVKRGYVPNSITYNLVIRGLCHVGEMQRAME 357
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
++M + + +Y +L RY A EK DL + + N
Sbjct: 358 LMERMEDDDCEPNVQTYNILIRYFCDAGEIEKGLDLFQKMGN 399
>gi|297844992|ref|XP_002890377.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297336219|gb|EFH66636.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 537
Score = 155 bits (391), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 123/484 (25%), Positives = 232/484 (47%), Gaps = 29/484 (5%)
Query: 21 ALLFSTTTQSSEIERITRIINDH--PFPDQP----LHPTLLQHLP---------QTTPLS 65
+LL TQ+ +E+ II DH P P L+P+L LP + +S
Sbjct: 55 SLLTPEDTQT--VEKFHSIIKDHYRKNPTNPNDAVLNPSLT--LPALSLDFSQIDASRIS 110
Query: 66 STLVENVLGRLFAA-HSNGL-KALEFFKFTLQHPHFT-PTPDAFEKTLHILARMRYFDQA 122
++V V+ + + H L ++L FF + + +P + + + + ++R FD A
Sbjct: 111 PSVVRCVIEKCGSVRHGIPLHQSLAFFNWATSRDDYDQKSPHPYNEMIDLAGKVRQFDLA 170
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
W L+ + ++ +++++ +I++ R + E + F+RME V F+
Sbjct: 171 WHLID-LMKSRNVEISIETFTILIRRYVRAGLASEAVHCFNRMEDYGCVP----DQIAFS 225
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
+++ ++ EA+S F L RF P+ L+ G+ +G+++ E + +M L G
Sbjct: 226 IVISNLSRKRRASEAQSFFDSLKDRFEPDVIVYTNLVRGWCRAGEISEAEKVFKDMKLAG 285
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P+V TY+I ID C+ G A +F +M C P+ T L+ +
Sbjct: 286 IEPNVYTYSIVIDALCRCGQISRAHDVFADMLDSGCAPNAITFNNLMRVHVKAGRPEKVL 345
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
Q++++M K +PD YN +I + R +L A+++++ M +K+ + T++T+F +
Sbjct: 346 QVYNQMKKLGCEPDTITYNFLIETHCRDENLENAVKVLNTMIKKKCEVNASTFNTIFRYI 405
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K + G ++Y +M+E K P T T +LM+ F + D+ L + + D+ P+
Sbjct: 406 EKKRDVNGAHRMYSKMMEAKCEPNTVTYNILMRMFAGSKSTDMVLKMKKDMDDKEVEPNV 465
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS-YRMLQRYLVQANANEKLEDL-D 480
+ LLVT C G W A++ K+M+ + S Y M+ L +A +K E+L +
Sbjct: 466 NTYRLLVTMFCGMGHWNNAYKLFKEMVEEKCLTPSLSLYEMVLAQLRRAGQLKKHEELVE 525
Query: 481 RMIK 484
+MI+
Sbjct: 526 KMIQ 529
>gi|449463822|ref|XP_004149630.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g49730-like [Cucumis sativus]
Length = 641
Score = 155 bits (391), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 116/433 (26%), Positives = 195/433 (45%), Gaps = 24/433 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+ S L E VL R A + G + FF + + P + + + ++ + L +MR F W
Sbjct: 105 MRSGLPERVLSRCGDAGNLGYR---FFVWASKQPGYRHSYEVYKAMIKTLGKMRQFGAVW 161
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
L+ +++ +P +LT + +++ R + + ++ +E D M K+G E
Sbjct: 162 ALIEEMRKENPYMLTPEVFIVLMRRFASVRMVKKAVEVLDEMP--------KYGCEPDEY 213
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F LL A C +KEA S+F + RF PN + LL G+ G + + ++
Sbjct: 214 VFGCLLDALCKNGSVKEAASLFEDMRVRFNPNLRHFTSLLYGWCREGKIMEAKHVLVQIK 273
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P +V YN + GY + G DA L EM++V C P+ + T LI +
Sbjct: 274 EAGFEPDIVVYNNLLGGYAQAGKMRDAFDLLAEMKKVNCGPNAASFTILIQSFCKTEKMD 333
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD--NVTYHT 357
+A ++F EM + D+ Y +IS + + + A E++D+M +K GHD ++Y
Sbjct: 334 EAMRIFTEMQGSGCEADVVTYTTLISGFCKWGNTDKAYEILDDMIQK--GHDPSQLSYLC 391
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ K LE +L + M + VP +++ C + + LWG + G
Sbjct: 392 IMMAHEKKEELEECMELIEEMRKIGCVPDLNIYNTMIRLVCKLGDLKEAVRLWGEMQAGG 451
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P L+V G S+G EA + K+M V R +S Y L+ EKLE
Sbjct: 452 LNPGLDTYILMVHGFLSQGCLVEACDYFKEM-VERGLLSAPQYGTLKELTNALLRAEKLE 510
Query: 478 DLDRMIKNLQAVL 490
M KN+ + +
Sbjct: 511 ----MAKNMWSCM 519
>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g05670, mitochondrial; Flags: Precursor
gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
Length = 741
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 100/356 (28%), Positives = 170/356 (47%), Gaps = 10/356 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
+TP ++ ++ R D+ W+L+ ++R P+ S+ +L RI K E
Sbjct: 277 YTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAE 336
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E AF M R+ GI + + L+ FC + +++ A F ++ SR P+ T
Sbjct: 337 E---AFSEMIRQ---GILP-DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTY 389
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++ GF + GD+ +HEM +G P VT+ I+GYCK G DA R+ M +
Sbjct: 390 TAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQ 449
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P++ T TTLI G ++ A +L EM K L+P+I YN++++ L + ++
Sbjct: 450 AGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEE 509
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A++L+ E E + D VTY T+ KS ++ ++ M+ P T +LM
Sbjct: 510 AVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMN 569
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
FC++ ++ G L +++ +G P+ + LV C R + A K M R
Sbjct: 570 GFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSR 625
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 149/345 (43%), Gaps = 4/345 (1%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+L++ S ++ L+R+SK T R E+ V + +N+++ C +K
Sbjct: 207 VLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVC---WNVASYNIVIHFVCQLGRIK 263
Query: 196 EARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EA + + + L + P+ + + ++ G+ G++ + M +G +P+ Y I
Sbjct: 264 EAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSII 323
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C+ +A F EM R LP TTLI G +I A + F EM R++
Sbjct: 324 GLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDIT 383
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ Y A+IS + D+ A +L EM K + D+VT+ + G K+ ++ ++
Sbjct: 384 PDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++ MI+ P T L+ C +D L + G P+ + +V GLC
Sbjct: 444 HNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCK 503
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
G EEA + + +Y L ++ +K +++
Sbjct: 504 SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEI 548
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/308 (22%), Positives = 128/308 (41%), Gaps = 15/308 (4%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
P S T E + G A H A +Q +P + + L + D A
Sbjct: 419 PDSVTFTELINGYCKAGHMK--DAFRVHNHMIQ-AGCSPNVVTYTTLIDGLCKEGDLDSA 475
Query: 123 WELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
EL+ + + P++ T S+ ++ + K + EE ++ E G+ +
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSI---VNGLCKSGNIEEAVKLVGEFEA---AGLNA-DTVT 528
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C EM +A+ + ++L + P T N+L+ GF G + E + M+
Sbjct: 529 YTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWML 588
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ T+N + YC + A ++++M P +T L+ G RN+
Sbjct: 589 AKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMK 648
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM + + Y+ +I ++ + A E+ D+M + + D + F
Sbjct: 649 EAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFD--F 706
Query: 360 FGLMKSSG 367
F K G
Sbjct: 707 FSDTKYKG 714
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ FC +++ + +L++ APN T N L+ + ++ A Y +M
Sbjct: 564 FNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMC 623
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P TY + G+CK +A LF+EM+ S+ T + LI G +
Sbjct: 624 SRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFL 683
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+AR++FD+M + L D ++ + + + + ++ +DE+ E
Sbjct: 684 EAREVFDQMRREGLAADKEIFDFFSDTKYKGKRPDTIVDPIDEIIE 729
>gi|224133408|ref|XP_002321560.1| predicted protein [Populus trichocarpa]
gi|222868556|gb|EEF05687.1| predicted protein [Populus trichocarpa]
Length = 491
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 107/402 (26%), Positives = 198/402 (49%), Gaps = 33/402 (8%)
Query: 48 QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFE 107
Q LH +Q PQ LV +L RL+ ++G KAL+FF HP ++ P +++
Sbjct: 56 QTLHSPTIQWTPQ-------LVNTILKRLW---NDGPKALQFFNLLSHHPSYSHHPSSYD 105
Query: 108 KTLHILARMRYFDQAWELMSHVQRTHPSLL--TLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ I AR+R + L S V R + L T K+ +I+ R + ++
Sbjct: 106 HAIDISARLR---DSPSLRSLVYRMRSARLGPTPKTFAIIAERYASAGKPHRAVK----- 157
Query: 166 EREIFVGIRKFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLG 221
+F+ + +FG + FN +L C K ++ A ++F +F + + N+++ G
Sbjct: 158 ---VFLSMHQFGCFQDLQSFNTILDVLCKSKRVEMAYNLFKVFKGKFRADCVSYNVMVNG 214
Query: 222 F---KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ K + A+EM EMV RG P++ +YN + GY + G +A F EM++ C
Sbjct: 215 WCLIKRTNK--ALEML-KEMVKRGLTPNLTSYNTMLKGYFRAGQINEAWDFFLEMKKRDC 271
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+ T TT+IHG G+ I +AR++FD M K+ + P + YNA I L + +++ A+
Sbjct: 272 EIDVITYTTVIHGFGVAGEIKRARKVFDTMVKKGVLPSVATYNAFIQVLCKKDNVDNAIV 331
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ +EM K +++TY+ + GL +E + RM + P +T +++++FC
Sbjct: 332 IFEEMVVKGYVPNSITYNLVIRGLCHRGEMERAMEFMGRMKDDGCEPNVQTYNLVIRYFC 391
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+D L+L+ + P+ ++L++ + R + ++
Sbjct: 392 DEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDD 433
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 4/103 (3%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF---KESGDVTAMEMF 234
+ +N++++ FC + E+ +A +F K+ S PN T NIL+ K+S D+
Sbjct: 381 QTYNLVIRYFCDEGEIDKALDLFQKMTSGDCLPNLDTYNILISAMFVRKKSDDLLVAGNL 440
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
EMV RGF P T+N ++G G G A + R
Sbjct: 441 LIEMVDRGFVPRKFTFNRVLNGLLLTGNQGFAKEILRLQSRCG 483
>gi|115455297|ref|NP_001051249.1| Os03g0746400 [Oryza sativa Japonica Group]
gi|113549720|dbj|BAF13163.1| Os03g0746400, partial [Oryza sativa Japonica Group]
Length = 613
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 11/427 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
++ LV+ +L R ++ + A FF + + D+++ + IL + + FD W
Sbjct: 189 VTGCLVDKILTRF---SNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 245
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ + L++L +M+ ++ R++ + E ++AF +M+R G+ K ++ NV
Sbjct: 246 GLINQMVEVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR---FGVVK-DTKAMNV 300
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR VF +L P+ + N L+ G+ ++ + EM GF
Sbjct: 301 LLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGF 360
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
PSVVTY ++ YC + F L +EM + C P++ T T L+H G +A
Sbjct: 361 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 420
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
FD++ + + PD YN++I L R L A +++EM I + T++T+
Sbjct: 421 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 480
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E KL +M E P +T L+K C V + L L ++ + P
Sbjct: 481 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 540
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN---EKLEDLD 480
LLV+ LC G+ ++ ++M+ + + ++ ++ L + N +K++ L
Sbjct: 541 TYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVLR 600
Query: 481 RMIKNLQ 487
+ NL+
Sbjct: 601 TQVTNLK 607
>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 157/307 (51%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C K + +A ++ +++S+ +PN T + L+ GF G + +++M+
Sbjct: 200 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMI 259
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L +P V T+NI +DG+CK G + +F M + P++ T +L+ G LV+ ++
Sbjct: 260 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVN 319
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ + M +R + PDI +YN +I + + ++ AM L EM K I D VTY+++
Sbjct: 320 KAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLI 379
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + KL D M + P T ++ C N +VD + L L D+G
Sbjct: 380 DGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIR 439
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ + +L+ GLC GR E+A + +LV+ ++ +Y M+ + + +E L
Sbjct: 440 PNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALAL 499
Query: 479 LDRMIKN 485
L +M N
Sbjct: 500 LSKMKDN 506
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 169/354 (47%), Gaps = 11/354 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + + ++ + A++L S + + P+++T ++ IS F + +
Sbjct: 195 PNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL------ISGFFTVGQL 248
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A D + I I+ FN+L+ FC +MKE ++VF ++ + PN T
Sbjct: 249 KDAIDLFNKMILENIKP-DVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +V + + M RG P + +YNI IDG+CK +AM LF+EM
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T +LI G + I A +L DEM R + PDI Y++++ +L + ++ A+
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ +++++ I + TY + GL K LE +++ ++ + T +++ F
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C D L L + D P ++++ L + ++A E ++M+ R
Sbjct: 488 CNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKA-EKLREMITR 540
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 111/244 (45%)
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
L + PN T L+ G G + +F+ +V GF+ V Y I G CK G
Sbjct: 120 LMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETR 179
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+ L ++ P++ +T+I G ++++ A L+ EM + + P++ Y+A+I
Sbjct: 180 AALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALI 239
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
S L A++L ++M + I D T++ + G K ++ ++ M++
Sbjct: 240 SGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIK 299
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T LM +C+ V+ ++ + RG P + ++L+ G C + +EA
Sbjct: 300 PNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNL 359
Query: 445 SKQM 448
K+M
Sbjct: 360 FKEM 363
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/230 (23%), Positives = 95/230 (41%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F H L G+ P+ +T+ I G C KG A+ + + + TLIHG
Sbjct: 114 FQHPHQLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLC 173
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
V A L + ++P++ Y+ +I + + + +N A +L EM K I + V
Sbjct: 174 KVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVV 233
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + G L+ L+++MI P T +L+ FC + ++ G ++ +
Sbjct: 234 TYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMM 293
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ +G P+ L+ G C +A M R SY +L
Sbjct: 294 MKQGIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNIL 343
>gi|108711050|gb|ABF98845.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
gi|215693326|dbj|BAG88708.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625789|gb|EEE59921.1| hypothetical protein OsJ_12549 [Oryza sativa Japonica Group]
Length = 554
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 108/427 (25%), Positives = 201/427 (47%), Gaps = 11/427 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
++ LV+ +L R ++ + A FF + + D+++ + IL + + FD W
Sbjct: 130 VTGCLVDKILTRF---SNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 186
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ + L++L +M+ ++ R++ + E ++AF +M+R G+ K ++ NV
Sbjct: 187 GLINQMVEVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR---FGVVK-DTKAMNV 241
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR VF +L P+ + N L+ G+ ++ + EM GF
Sbjct: 242 LLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGF 301
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
PSVVTY ++ YC + F L +EM + C P++ T T L+H G +A
Sbjct: 302 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 361
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
FD++ + + PD YN++I L R L A +++EM I + T++T+
Sbjct: 362 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 421
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E KL +M E P +T L+K C V + L L ++ + P
Sbjct: 422 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 481
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN---EKLEDLD 480
LLV+ LC G+ ++ ++M+ + + ++ ++ L + N +K++ L
Sbjct: 482 TYTLLVSWLCRNGKVAQSCLFLEEMVSKGFAPKQETFDLVMEKLEKRNLQSVYKKIQVLR 541
Query: 481 RMIKNLQ 487
+ NL+
Sbjct: 542 TQVTNLK 548
>gi|218193742|gb|EEC76169.1| hypothetical protein OsI_13484 [Oryza sativa Indica Group]
Length = 1874
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 8/374 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
++ LV+ +L R ++ + A FF + + D+++ + IL + + FD W
Sbjct: 1450 VTGCLVDKILTRF---SNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1506
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ + L++L +M+ ++ R++ + E ++AF +M+R G+ K ++ NV
Sbjct: 1507 GLINQMVEVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR---FGVVK-DTKAMNV 1561
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR VF +L P+ + N L+ G+ ++ + EM GF
Sbjct: 1562 LLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGF 1621
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
PSVVTY ++ YC + F L +EM + C P++ T T L+H G +A
Sbjct: 1622 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 1681
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
FD++ + + PD YN++I L R L A +++EM I + T++T+
Sbjct: 1682 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 1741
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E KL +M E P +T L+K C V + L L ++ + P
Sbjct: 1742 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 1801
Query: 424 ALDLLVTGLCSRGR 437
LLV+ LC G+
Sbjct: 1802 TYTLLVSWLCRNGK 1815
>gi|21686921|gb|AAK71569.2|AC087852_29 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1833
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 101/374 (27%), Positives = 177/374 (47%), Gaps = 8/374 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
++ LV+ +L R ++ + A FF + + D+++ + IL + + FD W
Sbjct: 1409 VTGCLVDKILTRF---SNDWVAAFGFFMWVGTQGGYCHCADSYDLMVDILGKFKQFDLMW 1465
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L++ + L++L +M+ ++ R++ + E ++AF +M+R G+ K ++ NV
Sbjct: 1466 GLINQMVEVG-GLMSLMTMTKVMRRLAGASRWTEAIDAFHKMDR---FGVVK-DTKAMNV 1520
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR VF +L P+ + N L+ G+ ++ + EM GF
Sbjct: 1521 LLDTLCKERSVKRARGVFQELRGTIPPDENSFNTLVHGWCKARMLKEALDTMEEMKQHGF 1580
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
PSVVTY ++ YC + F L +EM + C P++ T T L+H G +A
Sbjct: 1581 SPSVVTYTSLVEAYCMEKDFQTVYALLDEMRKRRCPPNVVTYTILMHALGKAGRTREALD 1640
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
FD++ + + PD YN++I L R L A +++EM I + T++T+
Sbjct: 1641 TFDKLKEDGVAPDASFYNSLIYILGRAGRLEDAYSVVEEMRTTGIAPNVTTFNTLISAAC 1700
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E KL +M E P +T L+K C V + L L ++ + P
Sbjct: 1701 DHSQAENALKLLVKMEEQSCNPDIKTYTPLLKLCCKRQWVKILLFLVCHMFRKDISPDFS 1760
Query: 424 ALDLLVTGLCSRGR 437
LLV+ LC G+
Sbjct: 1761 TYTLLVSWLCRNGK 1774
>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 158/307 (51%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + EA +F +++S+ +P+ T + L+ GF G + +++M+
Sbjct: 228 YNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMI 287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L +P V T+NI ++ +CK G + +F+ M + P+ T +L+ G LV+ ++
Sbjct: 288 LENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVN 347
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M + + PDI +Y+ MI+ + + + AM L EM K I D VTY ++
Sbjct: 348 KAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLI 407
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L D+M + P T ++ C +VD + L D+GF
Sbjct: 408 DGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQ 467
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P +L+ GLC G+ E+A + + +LV+ + +Y M+Q + V+ NE L
Sbjct: 468 PDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALAL 527
Query: 479 LDRMIKN 485
L +M N
Sbjct: 528 LSKMEDN 534
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 173/354 (48%), Gaps = 10/354 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + +++ ++A++L S + + P ++T ++ IS F +
Sbjct: 223 PNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL------ISGFCILGKL 276
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A D + I I+ FN+L+ AFC +MKE ++VF ++ + PN T N
Sbjct: 277 KDAIDLFNKMILENIKP-DVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +V + ++ M G P + +Y+I I+G+CK F +AM LF+EM R
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T ++LI G I A QL D+M R + P+I YN+++ +L + ++ A+
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ + ++K D TY + GL +S LE K+++ ++ + ++++ F
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
CV + L L + D G P ++++ L + + A + ++M+ R
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIAR 569
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L + K + Y L +ME F GI+ N+L+ FC + A SVF K+
Sbjct: 91 ILGSLVKSKHYHTVLYLSQKME---FRGIKP-NLVNCNILINCFCQLGLIPFAFSVFAKI 146
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L + P+ T L G G + +F+ ++V GF ++Y I G CK G
Sbjct: 147 LKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGET 206
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+ L + ++ P++ T+I V+ +++A LF EM + + PD+ Y+A+
Sbjct: 207 RAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSAL 266
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS L A++L ++M + I D T++ + K ++ ++D M++
Sbjct: 267 ISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGI 326
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM +C+ V+ +++ + G P + +++ G C +++EA
Sbjct: 327 KPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMN 386
Query: 444 CSKQM 448
K+M
Sbjct: 387 LFKEM 391
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 114/256 (44%), Gaps = 1/256 (0%)
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
F + ++ +A S+F +LL R P N +L +S + +M RG +P
Sbjct: 59 TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 118
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
++V NI I+ +C+ G A +F ++ ++ +P T TTL G L I QA
Sbjct: 119 NLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFH 178
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
D++ D +Y +I L + + AA++L+ ++ + + V Y+T+ + K
Sbjct: 179 DKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKV 238
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ L+ M+ P T L+ FC+ ++ ++L+ +I P +
Sbjct: 239 KLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTF 298
Query: 426 DLLVTGLCSRGRWEEA 441
++LV C G+ +E
Sbjct: 299 NILVNAFCKDGKMKEG 314
Score = 39.3 bits (90), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/207 (17%), Positives = 79/207 (38%), Gaps = 5/207 (2%)
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ R +P + ++N H F+ +P + K + +Y++ ++ D
Sbjct: 11 LPRYCVVPDSHFVPKKFQSFQFLKNTH-----FNFIPYSSSKINFISYSSTSTTFHSNND 65
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A+ L + + + ++ + L+KS V L +M P +
Sbjct: 66 VDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNI 125
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ FC + +++ ++ G+ P L GLC +G+ ++AF +++
Sbjct: 126 LINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALG 185
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDL 479
+ SY L L + DL
Sbjct: 186 FHFDQISYGTLIHGLCKVGETRAALDL 212
>gi|224077524|ref|XP_002305285.1| predicted protein [Populus trichocarpa]
gi|222848249|gb|EEE85796.1| predicted protein [Populus trichocarpa]
Length = 523
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 104/410 (25%), Positives = 188/410 (45%), Gaps = 11/410 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+RI++D P L +L ++ +S+ LVE VL R + G A FF +
Sbjct: 48 VNEISRILSDQRNPHHDLETSLNAF---SSEISTNLVEQVLKR---CKNLGFSAHRFFLW 101
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
+ P F + +++ ++IL R F W+ + ++ +H + + + ++ S+
Sbjct: 102 AKRIPGFEHSEESYHILVNILGTSRQFAILWDFLIEMRESHDFEINQEIIWLVFRSYSRA 161
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
+ + AFDRM G+R ++ + LL C K +K A+ F ++ +F
Sbjct: 162 NLPSDAIRAFDRMAE---FGLRP-SVDDLDKLLYVLCKCKHVKCAQQFFDRVKHKFEAKA 217
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
KT +IL+ G+ + G+ + EM RG V+ YN ++ CK G +A ++F E
Sbjct: 218 KTYSILVRGWGDIGEAVEARKVFDEMRGRGCALDVLAYNSLLEALCKGGNVDEAYKMFRE 277
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ P + I NIH + D M + +L P++ YN +I L +
Sbjct: 278 IGSHGVEPDACSYAIFIRAYCEANNIHSVFSVLDRMKRYDLVPNVFTYNCIIKKLCKNGK 337
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A +L+ EM E+ + D +Y+T+ + S + KL M++ +P + M
Sbjct: 338 VEDAYQLLHEMMERGVSPDAWSYNTILAYHCEHSEVNRATKLISIMVKDNCLPDRHSYNM 397
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
L+K R D +W + +RGF P +++ GLC +G+ EEA
Sbjct: 398 LLKLLVRVGRFDRATEIWESMGERGFYPSVSTYSVMIHGLCKKKGKLEEA 447
>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 517
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 104/379 (27%), Positives = 189/379 (49%), Gaps = 19/379 (5%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A L + + + +P+ ++ I L + K + Y L +ME F GI+
Sbjct: 44 DDAVSLFNRLLQQNPTPPNIEFNKI-LGSLVKSKHYHTVLYLSQKME---FRGIKP-NLV 98
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV---------- 228
N+L+ +FC + A SV K+L + PN T+N L+ G +G +
Sbjct: 99 NCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKL 158
Query: 229 -TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
A+++F ++M+L P V T+ I +DG+CK+G +A + M P + T +
Sbjct: 159 KDAVDLF-NKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNS 217
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ G LV+ +++A+ +F+ M + + PDI +Y+ +I+ + + ++ AMEL+ EM K+
Sbjct: 218 LMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQ 277
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + VTY ++ GL KS + KL D M + P T ++ C N +VD +
Sbjct: 278 IIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAI 337
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRY 466
L + ++G P+ + +L+ GLC G+ E+A + + +LV+ ++ +Y M+Q +
Sbjct: 338 ALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGF 397
Query: 467 LVQANANEKLEDLDRMIKN 485
+ +E L L +M N
Sbjct: 398 CDKGLFDEALTLLSKMEDN 416
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 128/262 (48%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ FC + +KEA++V ++ + P T N L+ G+ V + ++ M
Sbjct: 180 FTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMA 239
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P + +Y+I I+G+CK +AM L +EM +P++ T ++LI G I
Sbjct: 240 QLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKIS 299
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L DEM R P+I Y++++ +L + ++ A+ L+ +M+ + I + TY +
Sbjct: 300 YALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILI 359
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL +S LE K+++ ++ T ++++ FC D L L + D G
Sbjct: 360 KGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCI 419
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P+ ++++ L + E A
Sbjct: 420 PNAKTYEIIILSLFKKDENEMA 441
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 119/262 (45%), Gaps = 14/262 (5%)
Query: 126 MSHVQRTHPSLLTLKSM---SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
M +Q P ++T S+ ++ +++K +S F+ M + +G+ + ++
Sbjct: 202 MMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKS------IFNTMAQ---LGVSP-DIQSYS 251
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+L+ FC K M EA + ++ + PN T + L+ G +SG ++ EM R
Sbjct: 252 ILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDR 311
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P++VTY+ +D CK +A+ L +M+ P++ T T LI G + A
Sbjct: 312 GQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDA 371
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
R++F+++ + ++ Y MI + A+ L+ +ME+ + TY +
Sbjct: 372 RKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILS 431
Query: 362 LMKSSGLEGVCKLYDRMIEGKF 383
L K E KL MIE F
Sbjct: 432 LFKKDENEMAEKLLCEMIETNF 453
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 119/243 (48%), Gaps = 9/243 (3%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNIL 218
EA + + + GI+ G +N L+ + K++ +A+S+F + +P+ ++ +IL
Sbjct: 195 EAKNVLAMMMIQGIKP-GVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSIL 253
Query: 219 LLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+ GF + + AME+ EM + P+VVTY+ IDG CK G A++L +EM
Sbjct: 254 INGFCKIKMMDEAMELL-KEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRG 312
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ T ++++ + A L +M + ++P++ Y +I L + L A
Sbjct: 313 QPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDAR 372
Query: 338 ELMDEMEEKRIGHD-NV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV-VMLM 394
++ +++ K GH+ NV TY M G + L +M + +P +T ++++
Sbjct: 373 KVFEDLLVK--GHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIIL 430
Query: 395 KFF 397
F
Sbjct: 431 SLF 433
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/195 (19%), Positives = 84/195 (43%), Gaps = 14/195 (7%)
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+P T TT + ++ A LF+ + ++N P +N ++ SL++ + + +
Sbjct: 28 IPYFSTSTTFHNN----NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLY 83
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L +ME + I + V + + + + + ++++ + P T T+ L+K C
Sbjct: 84 LSQKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLC 143
Query: 399 VNFRV----------DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+N ++ ++L+ +I P + +LV G C GR +EA M
Sbjct: 144 LNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMM 203
Query: 449 LVRRRQVSEASYRML 463
+++ + +Y L
Sbjct: 204 MIQGIKPGVVTYNSL 218
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 46/273 (16%)
Query: 187 AFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
F ++ +A S+F +LL + P N N +L +S + +M RG +P
Sbjct: 36 TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKP 95
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
++V NI I+ +C+ G +I A +
Sbjct: 96 NLVNCNILINSFCQLG-----------------------------------HIPSAFSVL 120
Query: 306 DEMPKRNLKPDIGAYNAMISSLI---RCRD-------LNAAMELMDEMEEKRIGHDNVTY 355
++ K KP+ N +I L + D L A++L ++M + I D T+
Sbjct: 121 TKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTF 180
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ G K ++ + M+ P T LM + + +V+ +++ +
Sbjct: 181 TILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQ 240
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P + +L+ G C +EA E K+M
Sbjct: 241 LGVSPDIQSYSILINGFCKIKMMDEAMELLKEM 273
>gi|51971677|dbj|BAD44503.1| hypothetical protein [Arabidopsis thaliana]
Length = 447
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 195/413 (47%), Gaps = 17/413 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRY 118
+TTP + LV +VL RL+ ++G KAL+FF F H + +F+ + I AR+
Sbjct: 44 KTTPWTPNLVNSVLKRLW---NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHL 100
Query: 119 FDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
W L+ ++ R PS K+ +I+ R + ++ ++ F M E F +
Sbjct: 101 HPTVWSLIHRMRSLRIGPSP---KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL-- 155
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN +L C K +++A +F L RF+ + T N++L G+
Sbjct: 156 ---ASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKTLEVL 212
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EMV RG P++ TYN + G+ + G A F EM++ C + T TT++HG G+
Sbjct: 213 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 272
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I +AR +FDEM + + P + YNAMI L + ++ A+ + +EM + + TY
Sbjct: 273 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 332
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL + +L RM P +T M+++++ V+ L L+ +
Sbjct: 333 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 392
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASYRMLQRY 466
P+ ++L++G+ R R E+ Q + R S++ R+L+++
Sbjct: 393 GDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGSRLLRKF 445
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 118/269 (43%), Gaps = 1/269 (0%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P+ KT I+ + +G + M G + ++N +D CK A
Sbjct: 115 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 174
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF + + ++ T +++G L++ + ++ EM +R + P++ YN M+
Sbjct: 175 YELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKTLEVLKEMVERGINPNLTTYNTMLKG 233
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R + A E EM+++ D VTY T+ G + ++ ++D MI +P
Sbjct: 234 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 293
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +++ C V+ + ++ ++ RG+ P+ ++L+ GL G + E +
Sbjct: 294 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 353
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEK 475
+M + + +Y M+ RY + + EK
Sbjct: 354 RMENEGCEPNFQTYNMMIRYYSECSEVEK 382
>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 528
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 113/441 (25%), Positives = 204/441 (46%), Gaps = 12/441 (2%)
Query: 48 QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHF--TPTPDA 105
PL L + + + PL N L +L A+ G K+ + F Q F +PT A
Sbjct: 12 DPLETLLKEMVAEGRPLRP----NTLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHA 67
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
F K + IL F++A EL+ L + ++++ + + +E F
Sbjct: 68 FTKLIDILVNSGEFERA-ELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMF--- 123
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKE 224
RE+ + + + L+ A ++EARS F +L R PN T N+L+ F++
Sbjct: 124 -REMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G + + EM RGF+PSVVTYNI +D C G G A +LF +M C P T
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+TL++G G + +A ++F EM R + D+ YN+++++L + +++ +LM EM
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
K D +++T+ L K++ + +++ RM+E P + +L+ +
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAA 362
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ +++ GF P + L+ L + G+ +EAF ++M + +Y L
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422
Query: 465 RYLVQANANEKLEDLDRMIKN 485
L + N++ L + +K+
Sbjct: 423 DMLGKRGENQRAARLFQQMKD 443
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 76/180 (42%), Gaps = 1/180 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ A + AR VF +++ S P+ + NIL+ + GD EMV
Sbjct: 313 FNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMV 372
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P TYN I G +A + EEME C P + T L+ G
Sbjct: 373 EAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQ 432
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF +M + ++PD +Y I L L+ A+ L +M+ D Y +
Sbjct: 433 RAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILI 492
>gi|186495472|ref|NP_177628.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|133778904|gb|ABO38792.1| At1g74900 [Arabidopsis thaliana]
gi|332197524|gb|AEE35645.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 453
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 110/413 (26%), Positives = 195/413 (47%), Gaps = 17/413 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRY 118
+TTP + LV +VL RL+ ++G KAL+FF F H + +F+ + I AR+
Sbjct: 50 KTTPWTPNLVNSVLKRLW---NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHL 106
Query: 119 FDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
W L+ ++ R PS K+ +I+ R + ++ ++ F M E F +
Sbjct: 107 HPTVWSLIHRMRSLRIGPSP---KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL-- 161
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN +L C K +++A +F L RF+ + T N++L G+
Sbjct: 162 ---ASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EMV RG P++ TYN + G+ + G A F EM++ C + T TT++HG G+
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I +AR +FDEM + + P + YNAMI L + ++ A+ + +EM + + TY
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL + +L RM P +T M+++++ V+ L L+ +
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASYRMLQRY 466
P+ ++L++G+ R R E+ Q + R S++ R+L+++
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGSRLLRKF 451
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P+ KT I+ + +G + M G + ++N +D CK A
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF + + ++ T +++G L++ +A ++ EM +R + P++ YN M+
Sbjct: 181 YELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R + A E EM+++ D VTY T+ G + ++ ++D MI +P
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +++ C V+ + ++ ++ RG+ P+ ++L+ GL G + E +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEK 475
+M + + +Y M+ RY + + EK
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEK 388
>gi|225432738|ref|XP_002279088.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial [Vitis vinifera]
Length = 535
Score = 149 bits (375), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 198/416 (47%), Gaps = 15/416 (3%)
Query: 28 TQSSEIERITRIIN-DHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLK 85
T S+I++I+ ++ H D ++Q L +S +LVE VL R ++ +
Sbjct: 84 TIDSDIDKISELLKFRHSSAD-----AVVQALGGCGVSVSESLVEQVLKRF---SNDWIP 135
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FFK+ + + +++ + IL +++ FD WEL+ + R ++L +M+ +
Sbjct: 136 AFGFFKWAKAQTGYRHSMNSYNSMVDILGKLKKFDLMWELVEEMDRL-GGYVSLATMTKV 194
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ R+++ +++ +EAF MER G++K + N L+ A + ++ A VFV+
Sbjct: 195 MRRLARASRWKDAIEAFRGMER---FGVKK-DTLAMNTLMDALVKENSVEHANDVFVEFK 250
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
N T N+L+ G+ ++ + EM GF P V++Y ++ YC++ F
Sbjct: 251 DSILLNPHTFNVLIHGWCKARKMDNALKSMAEMKEHGFCPDVISYTSIVEAYCREKDFRK 310
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+ EME C P++ T T ++H G + I +A +++++M + PD Y+++I
Sbjct: 311 VNSVLNEMEEKGCPPNVVTYTIVMHALGKGKEISKALEVYEKMKGSSCVPDTSFYSSLIY 370
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L + L A ++ ++M ++ D +TY+TM S E KL +M E P
Sbjct: 371 ILSKAGRLKDARDVFEDMTKQGAIPDVLTYNTMISAACMHSQEEDALKLLLKMEESSCKP 430
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T L+K C N R+ + L ++ LLV GLC G+ E A
Sbjct: 431 DLNTYSPLLKMCCRNNRMKVLSALLNHMFKNDISLEVGTYSLLVHGLCKSGKLEHA 486
>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
Length = 755
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 178/379 (46%), Gaps = 13/379 (3%)
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
P TP + + L + D+A EL+ ++ + P + + ++ + K ++
Sbjct: 53 PGITPNVFTYAVVIQGLCKSGDLDKACELLEEMRESGP-VPDAAIYNFVIHALCKARNTA 111
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ L+ F ME E V + +++ C + EA + F K+ + PN T
Sbjct: 112 KALDYFRSMECEKNV-------ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTY 164
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N+L+ GF + V + EM G P+VVTY+ I G+C++ A +LF +M
Sbjct: 165 NVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVE 224
Query: 276 VACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C+P+L T TL+ +GL RN + +A +L DEM +R L+PD +Y+ +++ L + +
Sbjct: 225 NGCMPNLVTYNTLL--SGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKI 282
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A+++ ++ D V Y T+ GL K+ L+ CKL+++M E P T L
Sbjct: 283 DMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTAL 342
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
M C R+ + + DR P+ L+ GLC G+ +A E K+M+VR
Sbjct: 343 MDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGI 402
Query: 454 QVSEASYRMLQRYLVQANA 472
+ + +Y L N
Sbjct: 403 EPNVVTYNSLIHGFCMTNG 421
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/399 (24%), Positives = 172/399 (43%), Gaps = 30/399 (7%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD+ + TL+ L +T + L ++F +SNG P A
Sbjct: 264 PDKFSYDTLMAGLCKTGKIDMAL------KVFEDNSNG--------------DCPPDVVA 303
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L + D+A +L ++ P ++T ++ L + + Q ++ LE +
Sbjct: 304 YSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 363
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+R + + S L+ C ++++A+ VF +++ R PN T N L+ GF
Sbjct: 364 --DRNCTPNVITYSS-----LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 416
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ V + + EM G P ++TYN IDG CK G +A RLF +M+ C P +
Sbjct: 417 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 476
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T + LI G + I AR LFD+M K+ + PD+ ++ ++ ++ A L++E
Sbjct: 477 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 536
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M D TY ++ G K + ++ RM + P T L+ FC +
Sbjct: 537 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 596
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ L ++ G P+ L+ G C G EEA
Sbjct: 597 PTVAYRLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA 635
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 139/309 (44%), Gaps = 4/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C EA +F + ++F P+ T + L+ GF + + + +M+
Sbjct: 444 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 503
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VVT++ ++GYC G DA RL EEM C P + T T+L+ G V +
Sbjct: 504 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 563
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR++ M KR +P++ Y A+I + R A L++EM + + +TY ++
Sbjct: 564 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLI 623
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + LE K+ +R+ + ++M C R+ L L + G
Sbjct: 624 GGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 683
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA-SYRMLQRYLVQANANEKLE 477
P L+ GLC +A E ++M + R+ A +Y + + L + +E+
Sbjct: 684 PPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEAN 743
Query: 478 DL-DRMIKN 485
L D ++ N
Sbjct: 744 ALADELLGN 752
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 12/352 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISK 151
++ P + +H R D A++L + P+L+T ++ LS + +
Sbjct: 187 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL---LSGLCR 243
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+E E D M RE + KF ++ L+ C ++ A VF + P
Sbjct: 244 NGLMDEAYELLDEM-RERGLQPDKF---SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 299
Query: 212 NKTM-NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + L+ G ++G + + +M P VVT+ +DG CK +A ++
Sbjct: 300 DVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 359
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E ME C P++ T ++LI G + A+++F M R ++P++ YN++I
Sbjct: 360 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 419
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRT 389
+++A+ LM+EM D +TY+T+ GL K+ +L+ M + KF P T
Sbjct: 420 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-KAKFCNPDVIT 478
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ FC R+D+ L+ ++ + P LV G C+ G ++A
Sbjct: 479 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 530
>gi|449505568|ref|XP_004162510.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 614
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 230/461 (49%), Gaps = 19/461 (4%)
Query: 28 TQSSEIERITRII-NDHPFPDQPLHPTLLQHL-PQTTPLSSTLVENVLGRLFAAHSNGLK 85
T ++E+++I+ ++ N +P P+ + + L + +S+TLV +L R H++ ++
Sbjct: 161 TCNNEVDKISTMLENRYPSPEN-----VAEALNGKAYRVSNTLVAQLLKRF---HNDWIQ 212
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FK+ + +P+++ + IL + + F WEL+ + S+ +L++MS +
Sbjct: 213 AYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSV-SLETMSKV 271
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ R+++ ++E + AF +E+ GI + NVL+ A + +++A +VF +L
Sbjct: 272 IRRLARAGRHQEAIHAFRNIEK---YGIST-DTTAMNVLMDALVKEASVEDAHNVFRELK 327
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
N + N+L+ G+ ++ + E+ G P V++Y I+ +C++ F +
Sbjct: 328 CSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRN 387
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
++ +ME C P++ T T ++H G + I++A +++++M K PD Y+++I
Sbjct: 388 VDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIF 447
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L + L E++++ME++ + D +TY+T+ S E L +M E P
Sbjct: 448 ILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 507
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
+T L+K FC R+ + L ++ +LV GLC G+ A
Sbjct: 508 DLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFF 567
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
+ML + +++++ML+ L + + E++ ++I+NL
Sbjct: 568 GEMLSKAMVPKDSTFKMLKEELERKSMLEEM----KIIENL 604
>gi|449442128|ref|XP_004138834.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Cucumis sativus]
Length = 591
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 109/461 (23%), Positives = 230/461 (49%), Gaps = 19/461 (4%)
Query: 28 TQSSEIERITRII-NDHPFPDQPLHPTLLQHLP-QTTPLSSTLVENVLGRLFAAHSNGLK 85
T ++E+++I+ ++ N +P P+ + + L + +S+TLV +L R H++ ++
Sbjct: 138 TCNNEVDKISTMLENRYPSPEN-----VAEALNGKAYRVSNTLVAQLLKRF---HNDWIQ 189
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FK+ + +P+++ + IL + + F WEL+ + S+ +L++MS +
Sbjct: 190 AYGIFKWAKDQIPYRHSPESYNSMVDILGKAKNFRLMWELVDEMNHLAGSV-SLETMSKV 248
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ R+++ ++E + AF +E+ GI + NVL+ A + +++A +VF +L
Sbjct: 249 IRRLARAGRHQEAIHAFRNIEK---YGIST-DTTAMNVLMDALVKEASVEDAHNVFRELK 304
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
N + N+L+ G+ ++ + E+ G P V++Y I+ +C++ F +
Sbjct: 305 CSIPFNLASFNVLIHGYCKAKKLDEAWKIMGEVEKSGLEPDVISYTAFIEAHCREKDFRN 364
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
++ +ME C P++ T T ++H G + I++A +++++M K PD Y+++I
Sbjct: 365 VDKVLVQMEHKGCKPNVITFTIIMHALGKAKQINEALKVYEKMKKEGCVPDSSFYSSLIF 424
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L + L E++++ME++ + D +TY+T+ S E L +M E P
Sbjct: 425 ILGKAGRLTDVKEIVEDMEKQGVTPDVLTYNTLISCACAHSQEETALTLLLKMEEVSCKP 484
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
+T L+K FC R+ + L ++ +LV GLC G+ A
Sbjct: 485 DLKTYHPLLKMFCRKKRMKVLKFLLDHMFKNDVSIEAGTYAILVRGLCENGKLHLACSFF 544
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
+ML + +++++ML+ L + + E++ ++I+NL
Sbjct: 545 GEMLSKAMVPKDSTFKMLKEELERKSMLEEM----KIIENL 581
>gi|15219049|ref|NP_175673.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207559|sp|Q9SSR6.1|PPR78_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g52640, mitochondrial; Flags: Precursor
gi|5903042|gb|AAD55601.1|AC008016_11 Contains 2 PF|01535 DUF domains [Arabidopsis thaliana]
gi|45773940|gb|AAS76774.1| At1g52640 [Arabidopsis thaliana]
gi|62320530|dbj|BAD95108.1| hypothetical protein [Arabidopsis thaliana]
gi|332194712|gb|AEE32833.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 147 bits (372), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/411 (25%), Positives = 187/411 (45%), Gaps = 12/411 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+R+++DH P L TL+ + P+ +SS LVE VL R + G A FF +
Sbjct: 38 VNEISRVLSDHRNPKDDLEHTLVAYSPR---VSSNLVEQVLKR---CKNLGFPAHRFFLW 91
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
+ P F + +++ + IL + F W+ + + + ++ K I+ S+
Sbjct: 92 ARRIPDFAHSLESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRA 151
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPN 211
E AF+RM + GI+ ++ + LL + C +K + A+ F K P+
Sbjct: 152 NLPSEACRAFNRM---VEFGIKP-CVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPS 207
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
KT +IL+ G+ D + + EM+ R ++ YN +D CK G ++F+
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQ 267
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM + P + IH ++H A ++ D M + +L P++ +N +I +L +
Sbjct: 268 EMGNLGLKPDAYSFAIFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A L+DEM +K D TY+++ + KL RM K +P T
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN 387
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
M++K R D +W + +R F P +++ GL +G+ EEA
Sbjct: 388 MVLKLLIRIGRFDRATEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 124/293 (42%), Gaps = 2/293 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
E +++L++ + K+ ++ + F ++K I+ + + + ++
Sbjct: 103 ESYHILVEILGSSKQFALLWDFLIEAREYNYFEISSKVFWIVFRAYSRANLPSEACRAFN 162
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
MV G +P V + + C K A F + + +PS +T + L+ G +R
Sbjct: 163 RMVEFGIKPCVDDLDQLLHSLCDKKHVNHAQEFFGKAKGFGIVPSAKTYSILVRGWARIR 222
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ AR++FDEM +RN D+ AYNA++ +L + D++ ++ EM + D ++
Sbjct: 223 DASGARKVFDEMLERNCVVDLLAYNALLDALCKSGDVDGGYKMFQEMGNLGLKPDAYSFA 282
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ + K+ DRM VP T ++K C N +VD L +I +
Sbjct: 283 IFIHAYCDAGDVHSAYKVLDRMKRYDLVPNVYTFNHIIKTLCKNEKVDDAYLLLDEMIQK 342
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G P + ++ C A + +M + +Y M+ + L++
Sbjct: 343 GANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYNMVLKLLIR 395
>gi|115476116|ref|NP_001061654.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|113623623|dbj|BAF23568.1| Os08g0369200 [Oryza sativa Japonica Group]
gi|125603197|gb|EAZ42522.1| hypothetical protein OsJ_27088 [Oryza sativa Japonica Group]
gi|215740653|dbj|BAG97309.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 511
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 17/380 (4%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
DA++ + L R R FD AW L+ V+ T ++ +++ R + + AFD
Sbjct: 104 DAYDAVVDALGRARQFDAAWRLV--VEAAADGAATPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK 223
ME FVG R+ + EF LL C K K A VF K ++ PN K +L+ G+
Sbjct: 162 DME--AFVG-REPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWC 218
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR----------LFEEM 273
+ + F +M+ G P++VTYNI ++G C+ R L +EM
Sbjct: 219 KVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEM 278
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ P++ + + ++H +F M +R + P + Y ++I L C L
Sbjct: 279 HQRGIEPNVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRL 338
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE--GKFVPKTRTVV 391
+ A L+DEM + + TY+ F + G +LY++M P T
Sbjct: 339 DDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYN 398
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+L+ F + D + +W + + P ++ LLV GLC +W EA + +M+ R
Sbjct: 399 ILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIER 458
Query: 452 RRQVSEASYRMLQRYLVQAN 471
+ ++ L R L+QA+
Sbjct: 459 GFLPQKITFETLYRGLIQAD 478
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 92/225 (40%), Gaps = 11/225 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
+ S S++L S+ E L F M ER I + + S +++ + + +
Sbjct: 286 NVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTS-----VIKCLASCGRLDD 340
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIR 253
A S+ ++ S P+ T N ++ DV Y++M G P + TYNI
Sbjct: 341 AESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNIL 400
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
+ + K M+++ +M P L + T L+HG + +A Q F EM +R
Sbjct: 401 LGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGF 460
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYH 356
P + + LI+ L L ++E+ + G + YH
Sbjct: 461 LPQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPYH 505
>gi|255542990|ref|XP_002512558.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548519|gb|EEF50010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 511
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 121/474 (25%), Positives = 215/474 (45%), Gaps = 36/474 (7%)
Query: 19 RLALLFSTTT-----QSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVL 73
R+ LFST + S++ E ++ I+ +H P + +L H LSS+L+ L
Sbjct: 20 RVQCLFSTFSLPSLEPSNDAEIVSEILLNHHNPFHAMESSLQLH---GITLSSSLLHQTL 76
Query: 74 GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH 133
RL N AL FF ++L P + + + IL+++R FD +W+L+ + + +
Sbjct: 77 LRL---RHNSKIALSFFHYSLSLPSSSVNTTTYNLIIDILSKVRQFDVSWQLIIQMDQNN 133
Query: 134 --PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
P+ T I++ R+ + + AFD ME I + + F LL C
Sbjct: 134 LQPNSHTFL---ILIRRLISAGFTRQAIRAFDDMESFIAETVNQ---THFCFLLDTLCKY 187
Query: 192 KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+K A VF K RF PN + +L+ G+ + G + E F EM G +VVTYN
Sbjct: 188 GYIKVAVEVFNKRKFRFLPNVRIYTVLIYGWCKIGRIDMAERFIREMDEMGIEANVVTYN 247
Query: 252 IRIDGYCKKG----------CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
+ +DG C++ A ++F+EM + P + + + L+H + H+
Sbjct: 248 VLLDGICRRAKLQPEGRFERTIMKADKVFDEMRQKGIEPDVTSFSILLH---VYSRAHKP 304
Query: 302 RQLFDE---MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ D+ M + + P + Y +++ L C ++ A EL+++M + + TY+
Sbjct: 305 QLTVDKLKLMEEMGICPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCF 364
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
F E KLY ++ + P T +L+ F R ++ +W L G
Sbjct: 365 FKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSG 424
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
P + LLV GLC + +W++A + +M+ + +A++ ML L+Q+N
Sbjct: 425 SGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSN 478
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 97/222 (43%), Gaps = 8/222 (3%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ S SI+L S+ + T++ ME +GI + +L+ C+ + +A
Sbjct: 288 VTSFSILLHVYSRAHKPQLTVDKLKLMEE---MGICP-TVATYTSVLKCLCSCGRIDDAE 343
Query: 199 SVFVKLL-SRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ +++ + +PN T N ++ D TA++++ PSV TYNI +
Sbjct: 344 ELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALKLYRKIRQENLCDPSVHTYNILLGM 403
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ K F ++ ++ P L + T L+HG + +A Q F EM ++ L P
Sbjct: 404 FMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGLCEKQKWQKACQFFVEMIEKGLLPQ 463
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRI--GHDNVTYH 356
+ + + LI+ L L +++E+ I G + YH
Sbjct: 464 KATFEMLYAGLIQSNMLRTWRRLKKKLDEESIAFGSEFSNYH 505
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 73/173 (42%), Gaps = 1/173 (0%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P T +L G + E +MV G P+ TYN Y + A++
Sbjct: 320 CPTVATYTSVLKCLCSCGRIDDAEELLEQMVRNGVSPNAATYNCFFKEYRGRKDPETALK 379
Query: 269 LFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L+ ++ + C PS+ T L+ + + ++++++ PD+ +Y ++ L
Sbjct: 380 LYRKIRQENLCDPSVHTYNILLGMFMKLNRFNIVNEIWNDLRSSGSGPDLDSYTLLVHGL 439
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ A + EM EK + T+ ++ GL++S+ L +L ++ E
Sbjct: 440 CEKQKWQKACQFFVEMIEKGLLPQKATFEMLYAGLIQSNMLRTWRRLKKKLDE 492
>gi|326504802|dbj|BAK06692.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 522
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 118/476 (24%), Positives = 197/476 (41%), Gaps = 24/476 (5%)
Query: 10 SDKFPGISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLV 69
+D P ++ LAL S + + R++ H P P L LS L+
Sbjct: 24 ADVAPSLTHILAL--PPVAPSPTADELARLLLAHHNPFHPSESPLQLLSGGGVSLSQGLL 81
Query: 70 ENVLGRLFAAHSNGLKALEFFKFTLQHPHFT--PTPDAFEKTLHILARMRYFDQAWELMS 127
+L RL A L L + HP + P DA++ + L R FD AW L+
Sbjct: 82 VQILLRLRGASKLALSLLNAVRL---HPSVSSPPNADAYDAVVDALGRAHQFDAAWRLV- 137
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
V+ T ++ +++ R + + AFD ME F+G R+ ++EF LL
Sbjct: 138 -VEAAADGAATPRTFAVLARRYVAAGLTRQAVRAFDDME--AFLG-REPDAQEFTTLLDT 193
Query: 188 FCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C K K A VF K ++ PN K IL+ G+ + + F +M+ G P++
Sbjct: 194 LCKYKYPKVAVEVFNKRKYKYEPNEKMYTILIYGWCKVNRSDMAQKFLKDMIDHGIEPNI 253
Query: 248 VTYNIRIDGYCKKGCF----------GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
VTYNI ++G C+ A L +EM P + + + ++H
Sbjct: 254 VTYNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHVYSRAHK 313
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+F M R + P + Y ++I L C L A L+ EM + + TY+
Sbjct: 314 AELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPSPATYNC 373
Query: 358 MFFGLMKSSGLEGVCKLYDRMIE--GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
F + G +LY++M P + +L+ F R + + LW + +
Sbjct: 374 FFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILLGMFIKLDRHETVMELWNDMCE 433
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
R P + LLV G C++ +W EA + +M+ + + ++ R L+QA+
Sbjct: 434 RAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYRGLIQAD 489
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 111/257 (43%), Gaps = 14/257 (5%)
Query: 134 PSLLTLKSMSIMLSRISKFQS------YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
P+++T +I+L+ I + S ++ T+ A + + +E+ + ++++L
Sbjct: 251 PNIVT---YNILLNGICRHASLHPDNRFDRTVNAAENLLKEMNDRGIEPDVTSYSIILHV 307
Query: 188 FCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
+ + + +F + R P T ++ G + E EMV G PS
Sbjct: 308 YSRAHKAELCLCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAESLLGEMVSEGVCPS 367
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT--LIHGAGLVRNIHQA-RQ 303
TYN Y + A+ L+ +M + C P+ I + ++ G + + H+ +
Sbjct: 368 PATYNCFFKEYRGRKDVSGALELYNKM-KAPCSPTAPDIHSYNILLGMFIKLDRHETVME 426
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L+++M +R + PD+ +Y ++ A + EM EK +T+ T + GL+
Sbjct: 427 LWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFLPQKITFETPYRGLI 486
Query: 364 KSSGLEGVCKLYDRMIE 380
++ L +L R+ E
Sbjct: 487 QADMLRTWRRLKKRVDE 503
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 93/224 (41%), Gaps = 11/224 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S SI+L S+ E L F M +R I + + S +++ + +++A
Sbjct: 298 VTSYSIILHVYSRAHKAELCLCMFRSMKDRGICPTVATYTS-----VIKCLASCGRLEDA 352
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM--VLRGFRPSVVTYNIRI 254
S+ +++S P+ T N ++ DV+ Y++M P + +YNI +
Sbjct: 353 ESLLGEMVSEGVCPSPATYNCFFKEYRGRKDVSGALELYNKMKAPCSPTAPDIHSYNILL 412
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+ K M L+ +M A P L + T L+HG +A Q F EM ++
Sbjct: 413 GMFIKLDRHETVMELWNDMCERAVGPDLDSYTLLVHGFCAKEKWREACQFFMEMIEKGFL 472
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYH 356
P + LI+ L L ++E+ + G + +YH
Sbjct: 473 PQKITFETPYRGLIQADMLRTWRRLKKRVDEESAKFGDEYKSYH 516
>gi|125561327|gb|EAZ06775.1| hypothetical protein OsI_29018 [Oryza sativa Indica Group]
Length = 511
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 167/380 (43%), Gaps = 17/380 (4%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
DA++ + L R R FD AW L+ V+ T ++ +++ R + + AFD
Sbjct: 104 DAYDAVVDALGRARQFDAAWRLV--VEAAADGAATPRTFAVLARRYVAAGMTRQAVRAFD 161
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK 223
ME FVG R+ + EF LL C K K A VF K ++ PN K +L+ G+
Sbjct: 162 DME--AFVG-REPDAAEFTTLLDTLCKYKYPKVAAEVFNKRKYKYEPNEKMYTVLIYGWC 218
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR----------LFEEM 273
+ + F +M+ G P++VTYNI ++G C+ R L +EM
Sbjct: 219 KVNRNDMAQKFLKDMIYHGIEPNIVTYNILLNGICRHASLHPDYRFDRTVRAAEDLLKEM 278
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ P + + + ++H +F M +R + P + Y ++I L C L
Sbjct: 279 HQRGIEPDVTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLASCGRL 338
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE--GKFVPKTRTVV 391
+ A L+DEM + + TY+ F + G +LY++M P T
Sbjct: 339 DDAESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYN 398
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+L+ F + D + +W + + P ++ LLV GLC +W EA + +M+ R
Sbjct: 399 ILLGMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIER 458
Query: 452 RRQVSEASYRMLQRYLVQAN 471
+ ++ L R L+QA+
Sbjct: 459 GFLPQKITFETLYRGLIQAD 478
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 92/224 (41%), Gaps = 11/224 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S S++L S+ E L F M ER I + + S +++ + + +A
Sbjct: 287 VTSYSVILHVYSRAHKPELCLCMFRSMKERGICPTVATYTS-----VIKCLASCGRLDDA 341
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIRI 254
S+ ++ S P+ T N ++ DV Y++M G P + TYNI +
Sbjct: 342 ESLLDEMASEGVCPSPATYNCFFKEYRGRKDVNGALQLYNKMKAPGSPATPDIHTYNILL 401
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+ K M+++ +M P L + T L+HG + +A Q F EM +R
Sbjct: 402 GMFIKLNQHDTVMQVWNDMCESTVGPDLNSYTLLVHGLCDNKKWREACQFFMEMIERGFL 461
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYH 356
P + + LI+ L L ++E+ + G + YH
Sbjct: 462 PQKITFETLYRGLIQADMLRTWRRLKKRVDEEAAKFGEEFKPYH 505
>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
Length = 436
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 184/365 (50%), Gaps = 11/365 (3%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISK 151
T++ F A+ ++ L ++ ++A EL+ + R P LT + + R+ K
Sbjct: 70 TMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI---VERLCK 126
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAP 210
+ ++ L + M GI K + +N +L C +++++EAR +F K++ R P
Sbjct: 127 TKRIDDALATVEEMATR---GI-KPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINP 182
Query: 211 NNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
N T N L+ G ++ + TA E+F EM +G+ P+ V+YN IDG+CKK A +
Sbjct: 183 NVVTYNTLINGLCKAWRIETAYELF-KEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDV 241
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F++M R C+P++ T TTLI G + A ++ D M K+ + P++ Y+ +I +
Sbjct: 242 FDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCK 301
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
R ++ A +L+++M + I VTY+ + L ++ LE KL+ M + + P T
Sbjct: 302 VRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVT 361
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L++ C + ++D L+ +I +G P D L GL G+ EA E ++M
Sbjct: 362 YNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMK 421
Query: 450 VRRRQ 454
+ +R
Sbjct: 422 LTKRN 426
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 97/395 (24%), Positives = 170/395 (43%), Gaps = 15/395 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F D F K R+ + ++ M T L I++S + K +++E
Sbjct: 13 FNTVADGFAKA----GRLEQVKEVYQGMVEAGYT----LRASGYGILISCLCKVGNFDEA 64
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNIL 218
+ M + F K + ++ ++ C ++EAR + K+ P+ T +
Sbjct: 65 YKLLHTMRLKRF----KRKAIAYSTIINWLCKLNRVEEARELIEKMARYAPPDALTYGPI 120
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ ++ + EM RG +P YN + G C++ +A LFE+M +
Sbjct: 121 VERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRI 180
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++ T TLI+G I A +LF EM + P +YN +I + +DL AA +
Sbjct: 181 NPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKD 240
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ D+M + VTY T+ GL KS ++ ++ D M++ P T L+ FC
Sbjct: 241 VFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFC 300
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
RVD L ++ +G P ++L+ LC + E+AF+ + M RR +
Sbjct: 301 KVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVV 360
Query: 459 SYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+Y L R L +++L+ R+ + A PP
Sbjct: 361 TYNTLLRALCH---HKQLDGAHRLYAEMIAKGCPP 392
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 105/231 (45%), Gaps = 1/231 (0%)
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
L R P T N + GF ++G + ++ Y MV G+ Y I I CK G F
Sbjct: 3 LRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGNFD 62
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A +L M +T+I+ + + +AR+L ++M R PD Y ++
Sbjct: 63 EAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGPIV 121
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + + ++ A+ ++EM + I D Y+ + GL + +E L+++M++ +
Sbjct: 122 ERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRIN 181
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
P T L+ C +R++ L+ + +G+ P + + L+ G C +
Sbjct: 182 PNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKK 232
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
A E FK + + PT ++ + + + A ++ + R++ P+++T ++
Sbjct: 203 AYELFK-EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 261
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
LS+ K Q+ E L+ +++ + + ++ L+ FC + + EA + +
Sbjct: 262 DGLSKSGKVQAAAEVLDGM--VKKGVTPNV-----ATYSCLIDGFCKVRRVDEAHKLLEQ 314
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ AP T NILL + + + M R P+VVTYN + C
Sbjct: 315 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 374
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP--KRN 312
A RL+ EM C P T TL G +H+A++L ++M KRN
Sbjct: 375 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 426
>gi|326517954|dbj|BAK07229.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 549
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/408 (24%), Positives = 189/408 (46%), Gaps = 8/408 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S +V+ +L R S+ + A FF + + + D++ + IL + + FD W
Sbjct: 124 VSDRMVDKILRRF---GSDWVAAFGFFMWAGAQEGYRHSADSYNSMVDILGKFKQFDLMW 180
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L+S + L++L +M+ ++ R++ + + ++AF++M++ G+ K + NV
Sbjct: 181 GLISQMDEIG-GLVSLATMTKVMRRLAGASRWTDAIDAFNKMDQ---FGVVK-DTTAMNV 235
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR F +L P+ + N L+ G+ ++ + EM GF
Sbjct: 236 LLDTLCKERSVKRARGAFQELRGSVPPDESSFNTLVHGWCKARMMNEARDMMKEMEEHGF 295
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+PSV+TY I+ YC + F + EM C P++ T T ++H G +A
Sbjct: 296 KPSVITYTSLIEAYCMEKDFQTVYAILNEMRSKGCPPNVITYTIVMHALGKAGRTQEALD 355
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+FD++ PD YN++I L R L A ++D+M + T++T+
Sbjct: 356 IFDKVRGDGCAPDASFYNSLIYILGRAGRLEDANSVVDKMRMTGVRPTVATFNTLISAAC 415
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E K+ +M E P +T L+K C + + L ++ + P
Sbjct: 416 DHSQAENALKMLVKMEEQSCKPDIKTYTPLLKLCCKRQWIKVLRFLICHMFRKDITPDFS 475
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
LLVT LC G+ ++ ++M+++ + ++ ++ L +AN
Sbjct: 476 TYTLLVTWLCRNGKPAQSCLFLEEMVLKGFAPKKETFDLVAEKLDKAN 523
>gi|75194072|sp|Q9S7R4.1|PP125_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g74900, mitochondrial; AltName: Full=Protein
ORGANELLE TRANSCRIPT PROCESSING DEFECT 43; Flags:
Precursor
gi|5882733|gb|AAD55286.1|AC008263_17 Contains a PF|01535 DUF17 domain [Arabidopsis thaliana]
gi|12323885|gb|AAG51911.1|AC013258_5 hypothetical protein; 69434-67986 [Arabidopsis thaliana]
Length = 482
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 15/394 (3%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRY 118
+TTP + LV +VL RL+ ++G KAL+FF F H + +F+ + I AR+
Sbjct: 50 KTTPWTPNLVNSVLKRLW---NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHL 106
Query: 119 FDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
W L+ ++ R PS K+ +I+ R + ++ ++ F M E F +
Sbjct: 107 HPTVWSLIHRMRSLRIGPSP---KTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDL-- 161
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN +L C K +++A +F L RF+ + T N++L G+
Sbjct: 162 ---ASFNTILDVLCKSKRVEKAYELFRALRGRFSVDTVTYNVILNGWCLIKRTPKALEVL 218
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EMV RG P++ TYN + G+ + G A F EM++ C + T TT++HG G+
Sbjct: 219 KEMVERGINPNLTTYNTMLKGFFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVA 278
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I +AR +FDEM + + P + YNAMI L + ++ A+ + +EM + + TY
Sbjct: 279 GEIKRARNVFDEMIREGVLPSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTY 338
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL + +L RM P +T M+++++ V+ L L+ +
Sbjct: 339 NVLIRGLFHAGEFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGS 398
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ ++L++G+ R R E+ K +L
Sbjct: 399 GDCLPNLDTYNILISGMFVRKRSEDMVVAGKLLL 432
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/269 (21%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P+ KT I+ + +G + M G + ++N +D CK A
Sbjct: 121 RIGPSPKTFAIVAERYASAGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 180
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF + + ++ T +++G L++ +A ++ EM +R + P++ YN M+
Sbjct: 181 YELFRALRGRFSVDTV-TYNVILNGWCLIKRTPKALEVLKEMVERGINPNLTTYNTMLKG 239
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R + A E EM+++ D VTY T+ G + ++ ++D MI +P
Sbjct: 240 FFRAGQIRHAWEFFLEMKKRDCEIDVVTYTTVVHGFGVAGEIKRARNVFDEMIREGVLPS 299
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +++ C V+ + ++ ++ RG+ P+ ++L+ GL G + E +
Sbjct: 300 VATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEELMQ 359
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEK 475
+M + + +Y M+ RY + + EK
Sbjct: 360 RMENEGCEPNFQTYNMMIRYYSECSEVEK 388
Score = 38.1 bits (87), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 73/171 (42%), Gaps = 21/171 (12%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P+ + + +L + + A + + R P++ T + L +F EE
Sbjct: 298 PSVATYNAMIQVLCKKDNVENAVVMFEEMVRRGYEPNVTTYNVLIRGLFHAGEFSRGEEL 357
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNK 213
++ RME E G E +N++++ + E+++A +F K+ S PN
Sbjct: 358 MQ---RMENE--------GCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGSGDCLPNLD 406
Query: 214 TMNILLLGF---KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
T NIL+ G K S D+ EMV RGF P T+N ++G G
Sbjct: 407 TYNILISGMFVRKRSEDMVVAGKLLLEMVERGFIPRKFTFNRVLNGLLLTG 457
>gi|449469499|ref|XP_004152457.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
gi|449487784|ref|XP_004157799.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Cucumis sativus]
Length = 502
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 194/407 (47%), Gaps = 29/407 (7%)
Query: 50 LHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
LH LQ P+ LV+ VL RL+ +G KAL+FFK HP + + +F+
Sbjct: 69 LHGLQLQFTPE-------LVDKVLKRLWF---HGPKALQFFKHLEYHPSYAHSASSFDHA 118
Query: 110 LHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+ I RMR + W L++ ++ R PS K+ +I+ R + ++
Sbjct: 119 IDIAGRMRDYKTVWALVARMRARRIGPSS---KTFAIIAERFVAAGKPDRAIK------- 168
Query: 168 EIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
+F+ +R+ G + FN +L C K ++ A + K+L +F + + NI+ G+
Sbjct: 169 -VFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFKADVVSYNIIANGW 227
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
EMV RG P++ TYNI + GY + G +A F +M+ +
Sbjct: 228 CLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEFFLQMKEREVEIDV 287
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T TT++HG G+V I +AR++F+EM + P YNAMI L + + A+ + +E
Sbjct: 288 VTYTTMVHGFGVVGEIKRARKVFNEMVGEGILPSTATYNAMIQVLCKKDSVENAVLMFEE 347
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M +K + TY+ + GL + ++ + +RM P +T + +++FC
Sbjct: 348 MVKKGYVPNLTTYNVVIRGLFHAGNMDKAMEFIERMKTDGCEPNVQTYNVAIRYFCDAGD 407
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
V+ GL+++ + +G P+ ++L++ + R + E+ K +L
Sbjct: 408 VEKGLSMFEKM-GQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLLL 453
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/273 (18%), Positives = 107/273 (39%), Gaps = 35/273 (12%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M R PS T+ I + + G A+++F M C L + T++ +
Sbjct: 138 MRARRIGPSSKTFAIIAERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKR 197
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE--------------- 342
+ A ++ + K D+ +YN + + + A+E++ E
Sbjct: 198 VEMAYNNLFKVLRGKFKADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNI 257
Query: 343 --------------------MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M+E+ + D VTY TM G ++ K+++ M+
Sbjct: 258 LLKGYFRAGQLKEAWEFFLQMKEREVEIDVVTYTTMVHGFGVVGEIKRARKVFNEMVGEG 317
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T T +++ C V+ + ++ ++ +G+ P+ ++++ GL G ++A
Sbjct: 318 ILPSTATYNAMIQVLCKKDSVENAVLMFEEMVKKGYVPNLTTYNVVIRGLFHAGNMDKAM 377
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
E ++M + + +Y + RY A EK
Sbjct: 378 EFIERMKTDGCEPNVQTYNVAIRYFCDAGDVEK 410
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 82/196 (41%), Gaps = 1/196 (0%)
Query: 266 AMRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A++ F+ +E + S + I AG +R+ L M R + P + +
Sbjct: 95 ALQFFKHLEYHPSYAHSASSFDHAIDIAGRMRDYKTVWALVARMRARRIGPSSKTFAIIA 154
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + A+++ M E D +++T+ L KS +E +++ GKF
Sbjct: 155 ERFVAAGKPDRAIKVFLSMREHGCPQDLHSFNTILDILCKSKRVEMAYNNLFKVLRGKFK 214
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
+ ++ +C+ R L + +++RG P ++L+ G G+ +EA+E
Sbjct: 215 ADVVSYNIIANGWCLIKRTPKALEVLKEMVERGLTPTITTYNILLKGYFRAGQLKEAWEF 274
Query: 445 SKQMLVRRRQVSEASY 460
QM R ++ +Y
Sbjct: 275 FLQMKEREVEIDVVTY 290
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGF---KESGDVTAMEMFY 235
+ +NV ++ FC ++++ S+F K+ PN T N+L+ K+S D+
Sbjct: 393 QTYNVAIRYFCDAGDVEKGLSMFEKMGQGSLPNLDTYNVLISAMFVRKKSEDLVVAGKLL 452
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
EMV RGF P T+N ++G G A + + LP
Sbjct: 453 LEMVDRGFIPRKFTFNRVLNGLLLTGNQAFAKEILRLQSKCGRLP 497
>gi|297853022|ref|XP_002894392.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297340234|gb|EFH70651.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 525
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/411 (26%), Positives = 186/411 (45%), Gaps = 12/411 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+R+++DH P L TL + P+ +SS LVE VL R + G A FF +
Sbjct: 38 VNEISRVLSDHRNPKDDLEHTLAAYSPR---VSSNLVEQVLKR---CKNLGFPAHRFFLW 91
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
+ P F + +++ + IL + F W+ + + + +T K I+ S+
Sbjct: 92 AKRIPDFEHSLESYHILVEILGCSKQFALLWDFLIEAREYNYFEITSKVFWIVFRAYSRA 151
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPN 211
E AF+RM + GI+ ++ + LL + C +K + A+ F K P+
Sbjct: 152 NLPSEASRAFNRM---VEFGIKP-CVDDLDQLLHSLCDRKHVNHAQEFFDKAKGFGIVPS 207
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
KT +IL+ G+ D + + EM+ ++ YN +D CK G A ++F+
Sbjct: 208 AKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDALCKSGDVDGAYKMFQ 267
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM + P + IH ++H A Q+ D M + +L P++ +N +I +L +
Sbjct: 268 EMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNVYTFNHIIKTLCKNE 327
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A L+DEM +K D TY+++ + KL RM K +P T
Sbjct: 328 KVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSRMDRTKCLPDRHTYN 387
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
M++K R D +W + +R F P +++ GL +G+ EEA
Sbjct: 388 MVLKLLIRIGRFDRVTEIWEGMSERKFYPTVATYTVMIHGLVRKKGKLEEA 438
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/272 (20%), Positives = 117/272 (43%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F +K I+ + + + ++ MV G +P V + + C + A
Sbjct: 134 FEITSKVFWIVFRAYSRANLPSEASRAFNRMVEFGIKPCVDDLDQLLHSLCDRKHVNHAQ 193
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
F++ + +PS +T + L+ G +R+ AR++FDEM + N D+ AYNA++ +L
Sbjct: 194 EFFDKAKGFGIVPSAKTYSILVRGWARIRDASGARKVFDEMLENNCVVDLLAYNALLDAL 253
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ D++ A ++ EM + D ++ +S + ++ DRM VP
Sbjct: 254 CKSGDVDGAYKMFQEMGNLGLKPDAYSFAIFIHSYCDASDVHSAYQVLDRMKRYDLVPNV 313
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T ++K C N +VD L +I +G P + ++ C A + +
Sbjct: 314 YTFNHIIKTLCKNEKVDDAYLLLDEMIQKGANPDTWTYNSIMAYHCDHCEVNRATKLLSR 373
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
M + +Y M+ + L++ +++ ++
Sbjct: 374 MDRTKCLPDRHTYNMVLKLLIRIGRFDRVTEI 405
>gi|356517665|ref|XP_003527507.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Glycine max]
Length = 564
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 197/406 (48%), Gaps = 15/406 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L++L FF ++ F +P+ + + L + ++R FD AW ++ + ++ +T+ + S
Sbjct: 159 LQSLAFFNWSSSLDGFPASPEPYNEMLDLAGKLRQFDLAWHVID-LMKSRGVEITVHTFS 217
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARS 199
++ R + E + AF+RME +G F++++ + C ++ EA+S
Sbjct: 218 ALVRRYVRAGLAAEAVHAFNRME--------DYGCTPDMVAFSIVISSLCKKRRANEAQS 269
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F L RF P+ L+ G+ +GD++ E + +M + G +P+V TY+I ID C+
Sbjct: 270 FFDSLKHRFEPDVVVYTSLVHGWCRAGDISKAEEVFSDMKMAGIKPNVYTYSIVIDSLCR 329
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A +F EM C P+ T +L+ + +++++M + D +
Sbjct: 330 CGQITRAHDVFSEMIDAGCDPNAVTFNSLMRVHVKAGRTEKVLKVYNQMKRLGCPADTIS 389
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I S R +L A ++++ M +K + + T++ +F + K + G ++Y RM
Sbjct: 390 YNFIIESHCRDENLEEAAKILNLMVKKGVAPNASTFNFIFGCIAKLHDVNGAHRMYARMK 449
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P T T +LM+ F + D+ L + + + P+ + +L++ C W
Sbjct: 450 ELNCQPNTLTYNILMRMFAESRSTDMVLKMKKEMDESQVEPNVNTYRILISMFCDMKHWN 509
Query: 440 EAFECSKQMLVRR-RQVSEASYRMLQRYLVQANANEKLEDL-DRMI 483
A++ +M+ + + + + Y + L +A +K E+L D+M+
Sbjct: 510 NAYKLMMEMVEEKCLRPNLSVYETVLELLRKAGQLKKHEELVDKMV 555
>gi|413945076|gb|AFW77725.1| ATP binding protein isoform 1 [Zea mays]
gi|413945077|gb|AFW77726.1| ATP binding protein isoform 2 [Zea mays]
gi|413945078|gb|AFW77727.1| ATP binding protein isoform 3 [Zea mays]
Length = 634
Score = 145 bits (367), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/481 (23%), Positives = 214/481 (44%), Gaps = 19/481 (3%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIERITRIIND--HPFPDQPLHPTLLQHLPQTTPL 64
L SD+ G S++ A + ++R+ I D D L L P PL
Sbjct: 140 LAASDEDQGSSEQEA----AASNPEGVDRVCAAIADVVASGADANLEAALSALSP---PL 192
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
+V VL R AH + FF++ FT T + K LHIL + R F+
Sbjct: 193 CEAVVLAVLHRFKHAHRPSYR---FFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVA 249
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
++ + + L++ + + + + + + F+ M + F G E FN L
Sbjct: 250 MIQEMGKA--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGF----DDGVESFNCL 303
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
L A + +EAR VF K+ +++P+ ++ L+L + + ++ ++EM+ +G
Sbjct: 304 LVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMD 363
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VV +N I+G + +A+++FE M+ P++ T T LI + A +
Sbjct: 364 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMEC 423
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F+EM + +PD+ Y ++ + ++ +++EM +K D TY+ + L
Sbjct: 424 FEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTN 483
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ + ++Y +MI+ P T M+MK +F + +G +W + RG CP +
Sbjct: 484 RNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVN 543
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ + + G GR EEA++ ++M+ + + + Y +A + L +L + +
Sbjct: 544 SYTVFINGHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKV 603
Query: 484 K 484
K
Sbjct: 604 K 604
>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 550
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/454 (22%), Positives = 200/454 (44%), Gaps = 38/454 (8%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR 131
+LG + A++N L+ TPT F ++ + A+ + + + +
Sbjct: 63 ILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAFSIFAKILK 122
Query: 132 T--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----------EREIFVGIRKFGS 178
HP+ +T ++ ++ I +E L D + R + G+ K G
Sbjct: 123 LGYHPTTITFNTL---INGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGE 179
Query: 179 EE--------------------FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+N+++ + C K + +A ++ ++++ R +P+ T N
Sbjct: 180 TRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNS 239
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+LGF G + +HEMVL+ P V T++I +D CK G A + M +
Sbjct: 240 LILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQG 299
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T ++L+ G LV +++A+ +F M + + P +YN MI+ L + + ++ A+
Sbjct: 300 VIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEAL 359
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L EM K I D VTY+++ GL K + +L D M T L+
Sbjct: 360 SLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVL 419
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C N +D + L + D+G P + ++L+ GLC GR + A + + +L++ V+
Sbjct: 420 CKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNA 479
Query: 458 ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+Y ++ L + + E L ++N ++P
Sbjct: 480 WTYNIMINGLCKEGLFNEAEVLLSKMEN-NGIIP 512
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 3/211 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEM 238
++ L+ +C E+ +A+ VF +SR AP+ + NI++ G + V + EM
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVF-STMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEM 365
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P VTYN IDG CK G A +L +EM + T +LI +I
Sbjct: 366 CCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHI 425
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L ++ + ++P + YN +I L + L A ++ ++ K + TY+ M
Sbjct: 426 DKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIM 485
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
GL K L +M +P T
Sbjct: 486 INGLCKEGLFNEAEVLLSKMENNGIIPDAVT 516
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 97/218 (44%), Gaps = 5/218 (2%)
Query: 167 REIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
+ +F + + G + +N+++ K + EA S+F ++ + AP+ T N L+ G
Sbjct: 324 KHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDG 383
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G ++ EM G ++TYN ID CK A+ L ++++ PS
Sbjct: 384 LCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPS 443
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T LI G + A+ +F ++ + + YN MI+ L + N A L+
Sbjct: 444 MYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLS 503
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ME I D VTY T+ L + E KL MI
Sbjct: 504 KMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMI 541
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 99/224 (44%), Gaps = 10/224 (4%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
T+ P ++ ++ L +++ D+A L + + P +T S+ L ++
Sbjct: 329 TMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
+ SY L D M GI +N L+ C + +A ++ K+ +
Sbjct: 389 RI-SYAWQL--VDEMHNN---GIPA-DILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQ 441
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T NIL+ G + G + + + +++++G+ + TYNI I+G CK+G F +A L
Sbjct: 442 PSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVL 501
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
+ME +P T T+I +A +L EM R L
Sbjct: 502 LSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545
>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
Length = 528
Score = 145 bits (366), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 24/431 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P LHP LL LP PL +T N++ R + +ALE
Sbjct: 80 PISTASLHP-LLSALPSAPAFALFADMFRLRLPLCTTTF-NIMLRHLCSAGKPARALELL 137
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ Q P P + + A ++M ++ + ++S
Sbjct: 138 R---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 192
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K +E ++ FD M + G K + +N L+ +C Q ++ A +++ R A
Sbjct: 193 KVGRVDEAVKVFDEM---LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 249
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
T N+L+ G T EM +G P V TYNI I+G+CK+G A+ +
Sbjct: 250 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 309
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FE M R ++ T T LI+ + + +LFDE +R ++PD+ YNA+I+S
Sbjct: 310 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 369
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+++ A E+M EME+KRI D+VTY+T+ GL ++ KL D M E P T
Sbjct: 370 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 429
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + + V L + ++++GF P + L+ GLC G+ ++A K+M+
Sbjct: 430 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 489
Query: 450 VRRRQVSEASY 460
+++Y
Sbjct: 490 ENGITPDDSTY 500
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A EA + ++ + AP+ T NIL+ G + G+V + M
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG R +VVTY I KKG + +LF+E R P L LI+ NI
Sbjct: 315 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 374
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM K+ + PD YN ++ L ++ A +L+DEM E+ I D VTY+T+
Sbjct: 375 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 434
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ ++ + M+ F P T L++ C N + D N+ +++ G
Sbjct: 435 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 494
Query: 420 PHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 495 PDDSTYISLIEGLTT 509
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 143/344 (41%), Gaps = 45/344 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN++L+ C+ K AR++ ++ + R PN T N ++ GF G V A EM
Sbjct: 117 FNIMLRHLCSAG--KPARALELLRQMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMR 172
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
RG P+ TY I G+CK G +A+++F+EM
Sbjct: 173 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 232
Query: 274 ------------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
ER + ++ T L+H + +A +L +EM + L PD+ YN
Sbjct: 233 LDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ + ++ A+E+ + M + + VTY + + L K ++ KL+D +
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P L+ + +D + G + + P + L+ GLC GR +EA
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411
Query: 442 FECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ +M R Q +Y ++ Y ++ + + L + M+
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 455
>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
Length = 902
Score = 145 bits (365), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 24/431 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P LHP LL LP PL +T N++ R + +ALE
Sbjct: 454 PISTASLHP-LLSALPSAPAFALFADMFRLRLPLCTTTF-NIMLRHLCSAGKPARALELL 511
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ Q P P + + A ++M ++ + ++S
Sbjct: 512 R---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 566
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K +E ++ FD M + G K + +N L+ +C Q ++ A +++ R A
Sbjct: 567 KVGRVDEAVKVFDEM---LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 623
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
T N+L+ G T EM +G P V TYNI I+G+CK+G A+ +
Sbjct: 624 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 683
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FE M R ++ T T LI+ + + +LFDE +R ++PD+ YNA+I+S
Sbjct: 684 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 743
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+++ A E+M EME+KRI D+VTY+T+ GL ++ KL D M E P T
Sbjct: 744 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 803
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + + V L + ++++GF P + L+ GLC G+ ++A K+M+
Sbjct: 804 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 863
Query: 450 VRRRQVSEASY 460
+++Y
Sbjct: 864 ENGITPDDSTY 874
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A EA + ++ + AP+ T NIL+ G + G+V + M
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG R +VVTY I KKG + +LF+E R P L LI+ NI
Sbjct: 689 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 748
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM K+ + PD YN ++ L ++ A +L+DEM E+ I D VTY+T+
Sbjct: 749 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 808
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ ++ + M+ F P T L++ C N + D N+ +++ G
Sbjct: 809 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 868
Query: 420 PHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 869 PDDSTYISLIEGLTT 883
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 143/344 (41%), Gaps = 45/344 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN++L+ C+ K AR++ +LL + PN T N ++ GF G V A EM
Sbjct: 491 FNIMLRHLCSAG--KPARAL--ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 546
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
RG P+ TY I G+CK G +A+++F+EM
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606
Query: 274 ------------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
ER + ++ T L+H + +A +L +EM + L PD+ YN
Sbjct: 607 LDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ + ++ A+E+ + M + + VTY + + L K ++ KL+D +
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P L+ + +D + G + + P + L+ GLC GR +EA
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785
Query: 442 FECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ +M R Q +Y ++ Y ++ + + L + M+
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 829
>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
Length = 897
Score = 144 bits (364), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 114/431 (26%), Positives = 190/431 (44%), Gaps = 24/431 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P LHP LL LP PL +T N++ R + +ALE
Sbjct: 449 PISTASLHP-LLSALPSAPAFALFADMFRLRLPLCTTTF-NIMLRHLCSAGKPARALELL 506
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ Q P P + + A ++M ++ + ++S
Sbjct: 507 R---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 561
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K +E ++ FD M + G K + +N L+ +C Q ++ A +++ R A
Sbjct: 562 KVGRVDEAVKVFDEM---LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 618
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
T N+L+ G T EM +G P V TYNI I+G+CK+G A+ +
Sbjct: 619 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 678
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FE M R ++ T T LI+ + + +LFDE +R ++PD+ YNA+I+S
Sbjct: 679 FENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 738
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+++ A E+M EME+KRI D+VTY+T+ GL ++ KL D M E P T
Sbjct: 739 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVT 798
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + + V L + ++++GF P + L+ GLC G+ ++A K+M+
Sbjct: 799 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 858
Query: 450 VRRRQVSEASY 460
+++Y
Sbjct: 859 ENGITPDDSTY 869
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A EA + ++ + AP+ T NIL+ G + G+V + M
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG R +VVTY I KKG + +LF+E R P L LI+ NI
Sbjct: 684 RRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 743
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM K+ + PD YN ++ L ++ A +L+DEM E+ I D VTY+T+
Sbjct: 744 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLI 803
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ ++ + M+ F P T L++ C N + D N+ +++ G
Sbjct: 804 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 863
Query: 420 PHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 864 PDDSTYISLIEGLTT 878
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 143/344 (41%), Gaps = 45/344 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN++L+ C+ K AR++ +LL + PN T N ++ GF G V A EM
Sbjct: 486 FNIMLRHLCSAG--KPARAL--ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 541
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
RG P+ TY I G+CK G +A+++F+EM
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601
Query: 274 ------------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
ER + ++ T L+H + +A +L +EM + L PD+ YN
Sbjct: 602 LDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ + ++ A+E+ + M + + VTY + + L K ++ KL+D +
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P L+ + +D + G + + P + L+ GLC GR +EA
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780
Query: 442 FECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ +M R Q +Y ++ Y ++ + + L + M+
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 824
>gi|242071011|ref|XP_002450782.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
gi|241936625|gb|EES09770.1| hypothetical protein SORBIDRAFT_05g018050 [Sorghum bicolor]
Length = 528
Score = 144 bits (364), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 172/401 (42%), Gaps = 20/401 (4%)
Query: 86 ALEFFKFTLQHPHFT---PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
AL HP F P PDA++ + LAR R FD AW ++ V + + +S
Sbjct: 100 ALSLLHAARLHPSFVNTRPPPDAYDAVVDALARARQFDAAWRVV--VDASADGAASPRSF 157
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+++ R + + AFD ME FVG R+ S EF LL C K K A +F
Sbjct: 158 AVLARRYVAAGMTRQAVRAFDDME--AFVG-REANSAEFATLLDTLCKYKYPKVATEIFN 214
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
K ++ PN K IL+ G+ + F +M+ G P++VTYNI ++G C+
Sbjct: 215 KRKYKYNPNEKMYTILIYGWCKVNRNDMARKFLKDMLDHGIEPNIVTYNILLNGICRHAS 274
Query: 263 FGDAMR----------LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
R + +EM P + + + ++H +F M R
Sbjct: 275 LHPDYRFDRTVHSAEDVLKEMRDRGIEPDVTSYSIILHVYSRAHKPELCVCMFRSMKDRG 334
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ P + Y ++I L C L A L+DEM + + TY+ F + + G
Sbjct: 335 ICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGAL 394
Query: 373 KLYDRMIE-GKF-VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+LY++M + G P T +L+ F R ++W + + P + LL+
Sbjct: 395 QLYNKMKQPGSLTAPDIHTYNILLGMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIH 454
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
G C+ +W EA + +M+ + + ++ L R L+QA+
Sbjct: 455 GFCASQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQAD 495
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/258 (22%), Positives = 109/258 (42%), Gaps = 16/258 (6%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRM---EREIFVGIRKFGSE----EFNVLLQ 186
P+++T +I+L+ I + S FDR ++ +R G E ++++L
Sbjct: 257 PNIVTY---NILLNGICRHASLHPDYR-FDRTVHSAEDVLKEMRDRGIEPDVTSYSIILH 312
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ + + +F + R P T ++ G + E EMV G P
Sbjct: 313 VYSRAHKPELCVCMFRSMKDRGICPTVATYTSVIKCLASCGRLEDAETLLDEMVAEGVCP 372
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL--PSLQTITTLIHGAGLVRNIH-QAR 302
S TYN Y + A++L+ +M++ L P + T L+ G + N H +
Sbjct: 373 SPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILL-GMFIKLNRHGSVK 431
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
++ +M + + PD+ +Y +I + A + EM EK +T+ T++ GL
Sbjct: 432 DIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFLPQKITFETLYRGL 491
Query: 363 MKSSGLEGVCKLYDRMIE 380
+++ L +L R+ E
Sbjct: 492 IQADMLRTWRRLKRRVDE 509
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 94/224 (41%), Gaps = 11/224 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S SI+L S+ E + F M +R I + + S +++ + +++A
Sbjct: 304 VTSYSIILHVYSRAHKPELCVCMFRSMKDRGICPTVATYTS-----VIKCLASCGRLEDA 358
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIRI 254
++ ++++ P+ T N ++ DV+ Y++M G P + TYNI +
Sbjct: 359 ETLLDEMVAEGVCPSPATYNCFFKEYRGRNDVSGALQLYNKMKQPGSLTAPDIHTYNILL 418
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+ K G ++ +M P L + T LIHG + +A Q F EM ++
Sbjct: 419 GMFIKLNRHGSVKDIWSDMCESTVGPDLDSYTLLIHGFCASQKWREACQFFMEMIEKGFL 478
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYH 356
P + + LI+ L L ++E+ + G + YH
Sbjct: 479 PQKITFETLYRGLIQADMLRTWRRLKRRVDEEAAKFGDEFKLYH 522
>gi|224068054|ref|XP_002302657.1| predicted protein [Populus trichocarpa]
gi|222844383|gb|EEE81930.1| predicted protein [Populus trichocarpa]
Length = 602
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 116/455 (25%), Positives = 207/455 (45%), Gaps = 25/455 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+S++E++ R++ F + P L L ++ L + L E VL R A G+ A +
Sbjct: 48 ASDVEKVYRLL--RKFHSRV--PKLELALQESGVVLRNGLTERVLNRCGDA---GILAYK 100
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + ++ + +L++M+ F W L+ ++R + L+T + +++ R
Sbjct: 101 FFVWASKQPCYRHCYENYKAMIKVLSKMKQFGAVWALLEEMRRDNSVLITSEVFVVVMRR 160
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ + + +E D M K+G E F LL A C +KEA S+F +
Sbjct: 161 FASSRMVNKAIEVLDEMP--------KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDM 212
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF+P+ K LL G+ + G + + +M GF P +V YN + GY G G
Sbjct: 213 RVRFSPSLKHFTCLLYGWCKEGKLLEAKHVLVQMREAGFEPDIVVYNNLLSGYATAGKMG 272
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA L +E+ R C P+ + T LI + +A ++F EM + D+ Y A++
Sbjct: 273 DAFDLLKEIRRKGCDPNATSYTILIQALCGQEKMDEAMRVFVEMERSGCDADVVTYTALV 332
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
S + R ++ +++ M +K GH + +TY + K LE +L M +
Sbjct: 333 SGFCKWRMIDKGYQILQSMIQK--GHMPNQLTYLHLMLAHEKKEELEECKELMGEMQKIG 390
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P ++++ C V+ G++ W + G P +++ G G EA
Sbjct: 391 CIPDLSIYNVVIRLACKLGEVNAGVDAWNEMEVSGLSPGLDTFVIMINGFLGHGYLVEAC 450
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
+ K+M V R +S Y +L+ L EKLE
Sbjct: 451 QYFKEM-VERGLLSSRQYGILKDLLNALLRGEKLE 484
>gi|356557306|ref|XP_003546958.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 654
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 120/454 (26%), Positives = 196/454 (43%), Gaps = 23/454 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+S++E++ RI+ + L L + P L E VL R A G A F
Sbjct: 89 ASDVEKVYRILRKYHSRVPKLELALRESGVVVRP---GLTERVLSRCGDA---GNLAYRF 142
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
+ + + DA++ + +L+RMR F W L+ +++ +P L+T + I++ R
Sbjct: 143 YSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRF 202
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + +E D M K+G E F LL A C +KEA S+F +
Sbjct: 203 ASARMVHKAVEVLDEMP--------KYGCEPDEYVFGCLLDALCKNGSVKEAASLFEDMR 254
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
R+ P+ K LL G+ + G + + +M G P +V YN + GY + G GD
Sbjct: 255 YRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDMGIEPDIVVYNNLLGGYAQAGKMGD 314
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L +EM R C P+ + T LI + +A +LF EM + D+ Y+ +IS
Sbjct: 315 AYDLLKEMRRKRCEPNATSYTVLIQSLCKHERLEEATRLFVEMQTNGCQADVVTYSTLIS 374
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + EL+DEM ++ GH + V Y + K LE +L + M +
Sbjct: 375 GFCKWGKIKRGYELLDEMIQQ--GHFPNQVIYQHIMLAHEKKEELEECKELVNEMQKIGC 432
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P +++ C V G+ LW + G P +++ G +G EA E
Sbjct: 433 APDLSIYNTVIRLACKLGEVKEGIQLWNEMESSGLSPGMDTFVIMINGFLEQGCLVEACE 492
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
K+M V R + Y L+ + EKLE
Sbjct: 493 YFKEM-VGRGLFTAPQYGTLKELMNSLLRAEKLE 525
>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
Length = 455
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 113/431 (26%), Positives = 191/431 (44%), Gaps = 24/431 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P LHP LL LP PL +T N++ R + +ALE
Sbjct: 7 PISTASLHP-LLSALPSAPAFALFADMFRLRLPLCTTTF-NIMLRHLCSAGKPARALELL 64
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ Q P P + + A ++M ++ + ++S
Sbjct: 65 R---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 119
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K +E ++ FD M + G K + +N L+ +C Q ++ A +++ R A
Sbjct: 120 KVGRVDEAVKVFDEM---LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 176
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
T N+L+ G T EM +G P V TYNI I+G+CK+G A+ +
Sbjct: 177 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEI 236
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FE M R ++ T T+LI+ + + +LFDE +R ++PD+ YNA+I+S
Sbjct: 237 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 296
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+++ A E+M EME+KRI D+VTY+T+ GL ++ KL D M + P T
Sbjct: 297 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 356
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + + V L + ++++GF P + L+ GLC G+ ++A K+M+
Sbjct: 357 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 416
Query: 450 VRRRQVSEASY 460
+++Y
Sbjct: 417 ENGITPDDSTY 427
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A EA + ++ + AP+ T NIL+ G + G+V + M
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG R +VVTY I KKG + +LF+E R P L LI+ NI
Sbjct: 242 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 301
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM K+ + PD YN ++ L ++ A +L+DEM ++ I D VTY+T+
Sbjct: 302 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 361
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ ++ + M+ F P T L++ C N + D N+ +++ G
Sbjct: 362 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 421
Query: 420 PHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 422 PDDSTYISLIEGLTT 436
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/336 (23%), Positives = 141/336 (41%), Gaps = 45/336 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN++L+ C+ K AR++ +LL + PN T N ++ GF G V A EM
Sbjct: 44 FNIMLRHLCSAG--KPARAL--ELLRQMPRPNAVTYNTVIAGFCSRGRVQAALDIMREMR 99
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
RG P+ TY I G+CK G +A+++F+EM
Sbjct: 100 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 159
Query: 274 ------------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
ER + ++ T L+H + +A +L +EM + L PD+ YN
Sbjct: 160 LDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ + ++ A+E+ + M + + VTY ++ + L K ++ KL+D +
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P L+ + +D + G + + P + L+ GLC GR +EA
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338
Query: 442 FECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKL 476
+ +M R Q +Y ++ Y ++ + + L
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDAL 374
>gi|297839365|ref|XP_002887564.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297333405|gb|EFH63823.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 451
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 108/413 (26%), Positives = 192/413 (46%), Gaps = 17/413 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRY 118
+TTP + LV +VL RL+ ++G KAL+FF F H + +F+ + I AR+
Sbjct: 48 KTTPWTPNLVNSVLKRLW---NHGPKALQFFHFLDNHHREYVHDASSFDLAIDIAARLHI 104
Query: 119 FDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
W L+ ++ R PS K+ +I+ R + ++ ++ F M E F +
Sbjct: 105 HPTVWSLIHRMRSLRIGPSP---KTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDL-- 159
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN +L C K +++A +F L RF+ + T N+++ G+
Sbjct: 160 ---ASFNTILDVLCKSKRVEKAYELFRALRGRFSADTVTYNVIVNGWCLIKRTPKALEVL 216
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EMV RG P++ TYN + G+ + G A F EM++ C + T TT++HG G+
Sbjct: 217 KEMVDRGINPNLTTYNTMLQGFFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVA 276
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I + R +FDEM + + P + YNA I L + + A+ + +EM K + TY
Sbjct: 277 GEIKRTRNVFDEMIREGVLPSVATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTY 336
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL + +L RM P +T M+++++ V+ L L+ +
Sbjct: 337 NVLIRGLFHAGKFSRGEELMQRMENEGCEPNFQTYNMMIRYYSECSEVEKALGLFEKMGT 396
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASYRMLQRY 466
P+ ++L++G+ R R E+ Q + R S++ R+L+++
Sbjct: 397 GDCLPNLDTYNILISGMFVRKRSEDMVVAGNQAFAKEILRLQSKSGGRLLRKF 449
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/269 (22%), Positives = 116/269 (43%), Gaps = 1/269 (0%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P+ KT I+ + SG + M G + ++N +D CK A
Sbjct: 119 RIGPSPKTFAIVAERYASSGKPDKAVKLFLNMHEHGCFQDLASFNTILDVLCKSKRVEKA 178
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF + R T +++G L++ +A ++ EM R + P++ YN M+
Sbjct: 179 YELFRAL-RGRFSADTVTYNVIVNGWCLIKRTPKALEVLKEMVDRGINPNLTTYNTMLQG 237
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R + A E EM+++ D VTY T+ G + ++ ++D MI +P
Sbjct: 238 FFRAGQIRQAWEFFLEMKKRNCEIDVVTYTTVVHGFGVAGEIKRTRNVFDEMIREGVLPS 297
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T ++ C V+ + ++ ++ +G+ P+ ++L+ GL G++ E +
Sbjct: 298 VATYNAFIQVLCKKDSVENAVVMFEEMVRKGYEPNVTTYNVLIRGLFHAGKFSRGEELMQ 357
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEK 475
+M + + +Y M+ RY + + EK
Sbjct: 358 RMENEGCEPNFQTYNMMIRYYSECSEVEK 386
>gi|224110770|ref|XP_002315631.1| predicted protein [Populus trichocarpa]
gi|222864671|gb|EEF01802.1| predicted protein [Populus trichocarpa]
Length = 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/413 (27%), Positives = 191/413 (46%), Gaps = 20/413 (4%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD+ L + + +S+ LV+ +L R + AL F++ P + P+A
Sbjct: 20 PDEILLSLADEQVCDNIEVSNDLVDKLLLRF---KDDWKSALGVFRWAGLRPGYKHRPEA 76
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
++ + IL +M+ DQ EL+ + R H L+TL ++ + R S +E+ + FD +
Sbjct: 77 YDMMVDILGKMKQMDQMRELLEEMNRNH--LVTLNTVGKAMRRFSGAGKWEDAVRMFDEL 134
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES 225
G+ K +E N+LL C + ++++AR++F++L S PN T NI + G+ ++
Sbjct: 135 GT---FGLEK-NAESMNLLLDTLCKEGKVEQARAIFLELKSHILPNAHTFNIFIHGWCKA 190
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
V EM FRP V++Y+ I YC++ F L +EME C P++ T
Sbjct: 191 NLVDEAHWTLQEMKGHAFRPCVISYSTIILFYCRQHNFSKVYELLDEMEAQGCPPNVVTY 250
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EME 344
TT+I +N +A QL M KPD +N++I L R A+++ + EM
Sbjct: 251 TTIIVFLAKSQNTEEALQLTQRMKSAGCKPDTPFFNSLIYILGRAGRFQEAVDVFEKEMP 310
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRV 403
+ D TY++M L + L M F +T L+K C+
Sbjct: 311 NAGVSRDTSTYNSMIAMLCHHGHVSKALSLLREMETSAPFKLDGQTFYPLLK-SCLRTG- 368
Query: 404 DLGLNLWGYLIDRGFCPHGHALD-----LLVTGLCSRGRWEEAFECSKQMLVR 451
+NL L+D H +LD LL+ GLC + + A+ ++M+ +
Sbjct: 369 --DMNLLSQLLDDMVKKHQLSLDRSAYALLIHGLCRANKCQWAYHLFEEMISK 419
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 102/276 (36%), Gaps = 29/276 (10%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQA-W---ELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
H P F +H + D+A W E+ H R P +++ ++ + R F
Sbjct: 172 HILPNAHTFNIFIHGWCKANLVDEAHWTLQEMKGHAFR--PCVISYSTIILFYCRQHNFS 229
Query: 154 SYEETLEAFDRMERE-------IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
E L D ME + + I F ++ N TQ+ MK A
Sbjct: 230 KVYELL---DEMEAQGCPPNVVTYTTIIVFLAKSQNTEEALQLTQR-MKSAGC------- 278
Query: 207 RFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
P+ N L+ +G A+++F EM G TYN I C G
Sbjct: 279 --KPDTPFFNSLIYILGRAGRFQEAVDVFEKEMPNAGVSRDTSTYNSMIAMLCHHGHVSK 336
Query: 266 AMRLFEEMERVACLP-SLQTITTLIHGAGLVRNIHQARQLFDEMPKRN-LKPDIGAYNAM 323
A+ L EME A QT L+ +++ QL D+M K++ L D AY +
Sbjct: 337 ALSLLREMETSAPFKLDGQTFYPLLKSCLRTGDMNLLSQLLDDMVKKHQLSLDRSAYALL 396
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
I L R A L +EM K I T H +
Sbjct: 397 IHGLCRANKCQWAYHLFEEMISKDIVPKYQTCHMLL 432
>gi|225459754|ref|XP_002284756.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Vitis vinifera]
Length = 531
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 217/467 (46%), Gaps = 26/467 (5%)
Query: 41 NDHPFPDQP-LHPTL------LQHLPQTTPLSSTLVENVLGRLFAAHSNGL---KALEFF 90
N +P P P H T+ + +SS +V V+ + +G+ + L FF
Sbjct: 75 NTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCGGVR-HGIPFPQTLAFF 133
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ F +P+ + + + + ++R FD AW+L+ + +T + +++ +I++ R
Sbjct: 134 NWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLID-LMKTRNVEIPVETFTILVRRYV 192
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS 206
K E + AF+RME +G + F+V++ + ++ EA+S F L
Sbjct: 193 KAGLAAEAVHAFNRME--------DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD 244
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
RF P+ L+ G+ +G+++ E + EM + G +P+V TY+I ID C+ G A
Sbjct: 245 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRA 304
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+F EM V C P+ T L+ + Q++++M + PD YN +I S
Sbjct: 305 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 364
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R +L A+++++ + +K + +++ +F + K + +++ +M + K P
Sbjct: 365 HCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 423
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T T +LM+ F D+ L L + + P+ + +L++ C G W A+ K
Sbjct: 424 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 483
Query: 447 QMLVRR-RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+M+ + + S Y M+ + L +A +K E+L + N V P
Sbjct: 484 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 530
>gi|357520891|ref|XP_003630734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355524756|gb|AET05210.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 106/411 (25%), Positives = 186/411 (45%), Gaps = 12/411 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+RI++DH P L +L P +T +S+ LVE VL R + G A FF +
Sbjct: 43 VNEISRIVSDHRHPRHDLELSLT---PFSTQISTDLVEQVLKR---CNHLGFSAHRFFLW 96
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSL-LTLKSMSIMLSRISK 151
P F + +F + IL R + F W+ + + + S +T + I+ + S+
Sbjct: 97 AKSIPGFQHSVQSFHILVEILGRSKQFAILWDFLIETRESDSSCKITNEIFWIIFTAYSR 156
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ + +F RM+ GI+ + ++LL C +K +++A+ F ++ S F
Sbjct: 157 ADLPDGAIRSFVRMDE---FGIKP-SIIDVDLLLYTLCKKKHVRQAQQFFDQVKSHFLLT 212
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
KT +IL+ G+ + GD + M+ +G ++ YN ++ CK G +AM
Sbjct: 213 TKTYSILINGWGKIGDSGKARELFDAMLEQGCHVDLLAYNNLLEALCKGGHVDEAMDFLN 272
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M P T + I N+H A + D+M + NL P++ YN +I L + +
Sbjct: 273 DMLSKKVEPDAFTYSIFIRSYCDANNVHSAFGVLDKMRRCNLLPNVFTYNCIIKRLCKIK 332
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A +L+DEM + D +Y+ + + KL RM + P T
Sbjct: 333 KVEEAYQLLDEMISSGLKPDTWSYNAIQAYHCDHCEVNRALKLISRMEKDVCFPDRHTYN 392
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
M++K R D +W + D+ F P +++ GLC +G+ EEA
Sbjct: 393 MVLKLLIRIGRFDKATEVWECMGDKKFYPSVSTYSVMIHGLCKKKGKLEEA 443
>gi|449457341|ref|XP_004146407.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
gi|449523938|ref|XP_004168980.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Cucumis sativus]
Length = 506
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 119/463 (25%), Positives = 202/463 (43%), Gaps = 25/463 (5%)
Query: 20 LALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAA 79
L+ L S + + +++I+ H P + +L H + SS L++ L RL
Sbjct: 25 LSSLLPQIQPSKDADLVSQILLHHHNPFHSMESSLQLH---SISFSSHLLDQTLLRL--T 79
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
H + + AL FF + P + ++ L ILA++R FD AW L+ +Q H T
Sbjct: 80 HHSKI-ALSFFDYANSLPSNPISTTSYNILLDILAKVRQFDAAWHLI--LQMDHKGTDTF 136
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+++ R+ + + AFD +E G K G ++F LL C +K A
Sbjct: 137 ---LLLIRRLISSGRTRQAIRAFDDIEG--LTG-NKVGIDDFCYLLDVLCKYGYVKVAVE 190
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
VF K F + K IL+ G+ + G E F +MV RG P+VVTYN+ ++G C+
Sbjct: 191 VFNKRKEEFGVDVKIYTILIYGWCKIGRFEMAERFLKDMVERGIEPNVVTYNVLLNGVCR 250
Query: 260 K------GCFGDAMR----LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
+ G F +R +F+EM + P + + + ++H + +M
Sbjct: 251 RASLHPEGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMK 310
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ + P + Y ++I L C L L++EM I TY+ F
Sbjct: 311 ELGISPTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGA 370
Query: 370 GVCKLYDRMIEGKF-VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
G +LY +M E P T +L+ F + + LW + + G P + +
Sbjct: 371 GALRLYKKMREDCLCAPSLHTYNILLALFLNLDKKETLKELWNDMKESGVGPDLDSYTTI 430
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ GLC + RW EA + +M+ R + ++ ML R L+Q++
Sbjct: 431 IHGLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSD 473
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 99/223 (44%), Gaps = 14/223 (6%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAF--CTQKEMKEARSVFVKLLSRFA 209
E E R ++F +RK G E F+++L + + E+ + +K L +
Sbjct: 257 EGRFEKTIRHAEKVFDEMRKRGIEPDVTSFSIVLHVYSRAHKPELSLDKLKQMKELG-IS 315
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P T ++ G + E EMV G PS TYN Y + A+RL
Sbjct: 316 PTVATYTSVIKCLCSCGRLEDGENLIEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRL 375
Query: 270 FEEM-ERVACLPSLQTITTLIHGAGLVRNIHQA---RQLFDEMPKRNLKPDIGAYNAMIS 325
+++M E C PSL T L+ L N+ + ++L+++M + + PD+ +Y +I
Sbjct: 376 YKKMREDCLCAPSLHTYNILL---ALFLNLDKKETLKELWNDMKESGVGPDLDSYTTIIH 432
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
L + + A + EM E+ VT+ ++ GL++S L
Sbjct: 433 GLCEKQRWSEACQFFVEMIERGFLPQKVTFEMLYRGLIQSDML 475
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 93/220 (42%), Gaps = 8/220 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S SI+L S+ E +L+ +M+ +GI + + +++ C+ +++ ++
Sbjct: 285 SFSIVLHVYSRAHKPELSLDKLKQMKE---LGISPTVAT-YTSVIKCLCSCGRLEDGENL 340
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF-RPSVVTYNIRIDGYC 258
+++ S +P+ T N ++ D Y +M PS+ TYNI + +
Sbjct: 341 IEEMVRSGISPSPTTYNCFFKEYRGRKDGAGALRLYKKMREDCLCAPSLHTYNILLALFL 400
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
L+ +M+ P L + TT+IHG + +A Q F EM +R P
Sbjct: 401 NLDKKETLKELWNDMKESGVGPDLDSYTTIIHGLCEKQRWSEACQFFVEMIERGFLPQKV 460
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEE--KRIGHDNVTYH 356
+ + LI+ L L ++EE K G + YH
Sbjct: 461 TFEMLYRGLIQSDMLRTWRRLKKKLEEESKTYGSELKNYH 500
>gi|359496995|ref|XP_003635394.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Vitis vinifera]
Length = 622
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 117/455 (25%), Positives = 199/455 (43%), Gaps = 25/455 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
S+++E++ RI+ P L L ++ + S L E VL R A + G +
Sbjct: 55 SADVEKVYRILRKF----HSRVPKLELALQESGVAVRSGLTERVLNRCGDAGNLGYR--- 107
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + ++ + IL +MR F W L+ ++R +P ++ +++ R
Sbjct: 108 FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWALIEEMRRENPQFVSPYVFVVLMRR 167
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ + ++ +E D M K+G E F LL A C +KEA S+F +
Sbjct: 168 FASARMVKKAIEVLDEMP--------KYGCEPDEHVFGCLLDALCKNGSVKEAASLFEDM 219
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF P K LL G+ G + + ++ GF P +V YN + GY G
Sbjct: 220 RIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREAGFEPDIVVYNNLLTGYAAAGKMV 279
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA L +EM R C P++ + TTLI + + +A ++F EM D Y +I
Sbjct: 280 DAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEAMRVFFEMQSCGCPADAVTYTTLI 339
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
S + ++ EL+D M ++ GH + +TY + K LE +L + M +
Sbjct: 340 SGFCKWGKISKGYELLDNMIQQ--GHIPNPMTYLHIMAAHEKKEELEECIELMEEMRKIG 397
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P ++++ C + G+ +W + G P +++ G S+ EA
Sbjct: 398 CTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLSPGLDTFVIMIHGFLSQRCLVEAC 457
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
E K+M V R +S Y L+ L EKLE
Sbjct: 458 EFFKEM-VGRGLLSAPQYGTLKELLNSLLRAEKLE 491
>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 181/376 (48%), Gaps = 15/376 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-- 128
N+L R F A N L FF+ ++ P + + +++ D+A++L+
Sbjct: 207 NILIRGFCAAGNLEMGLRFFE-EMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMG 265
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV--GIRKFGSEEFNVLLQ 186
++ P+LLT + L R+ + EET M+R+ F G+ +N L+
Sbjct: 266 LEGLEPNLLTYNMVINGLCRVGRI---EETSGVLAEMDRKGFAPDGVT------YNTLVN 316
Query: 187 AFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+C +A + ++L + P+ T L+ ++G++ F+ +M +RG RP
Sbjct: 317 GYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ VTY I+G+ +KG +A R+++EM R P++ T L++G + + +A L
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
M + L PD+ +Y+ +I+ R ++L+ A ++ EM EK + D +TY ++ GL +
Sbjct: 437 RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQ 496
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L C L+ M+ +P T L+ +C ++ LNL +I +GF P
Sbjct: 497 RRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTY 556
Query: 426 DLLVTGLCSRGRWEEA 441
++L+ GL + R EA
Sbjct: 557 NVLINGLNKQARTREA 572
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 155/331 (46%), Gaps = 4/331 (1%)
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
+++ RE+ +N+L++ FC ++ F ++ +R PN T N ++
Sbjct: 188 EKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGA 247
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ + + M L G P+++TYN+ I+G C+ G + + EM+R P
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
T TL++G V N HQA L EM + L PD+ Y ++I+++ + +LN AME D
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M + + + VTY ++ G + ++ +++D MI F P T L+ CV+
Sbjct: 368 QMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSG 427
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY- 460
R++ + L + +G P + ++ G C + AF+ + +M+ + +Y
Sbjct: 428 RMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYS 487
Query: 461 RMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
++Q Q NE + M+ +++LP
Sbjct: 488 SLIQGLCEQRRLNEACDLFQEMLN--KSLLP 516
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 164/365 (44%), Gaps = 10/365 (2%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
L + S +I++ + E L F+ MER + +N ++ A+C K + E
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLP----NVVTYNTVIGAYCKLKRIDE 256
Query: 197 ARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A + + L PN T N+++ G G + EM +GF P VTYN ++
Sbjct: 257 AFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVN 316
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
GYCK G F A+ L EM R P + T T+LI+ N+++A + FD+M R L+P
Sbjct: 317 GYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRP 376
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+ Y ++I+ + ++ A + DEM VTY+ + G S +E L
Sbjct: 377 NGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLL 436
Query: 376 DRMIEGK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
R +EGK P + ++ FC +D + ++++G P L+ GLC
Sbjct: 437 -RGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCE 495
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ R EA + ++ML + E +Y ++ Y + + NE L D MIK + LP
Sbjct: 496 QRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK--KGFLPDT 553
Query: 494 TRQQV 498
V
Sbjct: 554 VTYNV 558
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/369 (26%), Positives = 167/369 (45%), Gaps = 25/369 (6%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
F P + ++ ++ F QA L S + R P ++T S+ ++ + K +
Sbjct: 304 FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSL---INTMCKAGNLN 360
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+E FD+M G+R G + L+ F + M EA ++ +++ S F P T
Sbjct: 361 RAMEFFDQMHVR---GLRPNGVT-YTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTY 416
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N LL G SG + M +G P VV+Y+ I G+C+ A ++ EM
Sbjct: 417 NALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVE 476
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P T ++LI G R +++A LF EM ++L PD Y ++I+ + DLN
Sbjct: 477 KGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNE 536
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL---------------YDRMIE 380
A+ L DEM +K D VTY+ + GL K + +L YD +IE
Sbjct: 537 ALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE 596
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ ++VV L+K FC+ ++ ++ +I R P+ ++++ G C G +
Sbjct: 597 SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHK 656
Query: 441 AFECSKQML 449
A + K+M+
Sbjct: 657 AHKLYKEMV 665
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 115/263 (43%), Gaps = 52/263 (19%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
I+ F Y+E AF + G+ + ++ L+Q C Q+ + EA +F ++L++
Sbjct: 455 IAGFCRYQELDRAFQMNAEMVEKGVSP-DAITYSSLIQGLCEQRRLNEACDLFQEMLNKS 513
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ T L+ G+ + GD+ + EM+ +GF P VTYN+ I+G K+ +A
Sbjct: 514 LLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAK 573
Query: 268 RLFEEMERVACLPS---------------LQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
RL ++ +P+ +++ LI G + +++A Q+F+ M KRN
Sbjct: 574 RLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRN 633
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
KP+ YN +I CRD N +
Sbjct: 634 QKPNEAVYNVIIHG--HCRDGN---------------------------------VHKAH 658
Query: 373 KLYDRMIEGKFVPKTRTVVMLMK 395
KLY M++ F+P T T++ L+K
Sbjct: 659 KLYKEMVDFGFIPHTVTIIALVK 681
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 105/256 (41%), Gaps = 7/256 (2%)
Query: 240 LRGFRPSVVTYNIRIDGY--CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
L GF P V++YN +D C+K A +++ EM ++ + LI G N
Sbjct: 160 LNGFMPGVLSYNAILDSIVRCRKPVIF-AEKVYREMIASGVSLNVFSYNILIRGFCAAGN 218
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ + F+EM + P++ YN +I + + + ++ A +L+ M + + + +TY+
Sbjct: 219 LEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNM 278
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL + +E + M F P T L+ +C L L ++ G
Sbjct: 279 VINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG 338
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKL 476
P L+ +C G A E QM VR + + +Y L Q +E
Sbjct: 339 LPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAY 398
Query: 477 EDLDRMIKNLQAVLPP 492
D MI+ + PP
Sbjct: 399 RIWDEMIR---SGFPP 411
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 86/242 (35%), Gaps = 37/242 (15%)
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR------ 331
C S ++ + I +A + D P + +YNA++ S++RCR
Sbjct: 128 CNSSSAVFDLVVKSCSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFA 187
Query: 332 ------------------------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+L + +EME R + VTY+T+
Sbjct: 188 EKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGA 247
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K ++ KL M P T M++ C R++ + + +GF P
Sbjct: 248 YCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPD 307
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA-NANEKLEDLD 480
G + LV G C G + +A +ML +Y L + +A N N +E D
Sbjct: 308 GVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFD 367
Query: 481 RM 482
+M
Sbjct: 368 QM 369
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 86/208 (41%), Gaps = 27/208 (12%)
Query: 102 TPDA--FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+PDA + + L R ++A +L + + P T S+ ++ K E
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSL---INGYCKEGDLNE 536
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNN---- 212
L D M ++ F+ + +NVL+ Q +EA+ + +KL PN
Sbjct: 537 ALNLHDEMIKKGFLP----DTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYD 592
Query: 213 -----------KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K++ L+ GF G + + + M+ R +P+ YN+ I G+C+ G
Sbjct: 593 TLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDG 652
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLI 289
A +L++EM +P TI L+
Sbjct: 653 NVHKAHKLYKEMVDFGFIPHTVTIIALV 680
>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
Length = 1116
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 102/364 (28%), Positives = 169/364 (46%), Gaps = 16/364 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIM 145
+F+ + P F T +F K L++L + +A +L R P+ T ++ +
Sbjct: 96 QFYDWAAALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTL--L 153
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ E TL F R+ ++N++LQ+ C E A +F +
Sbjct: 154 RATYKAGGDVERTLGFFRRIRSSSRS------VADYNIVLQSLCRAGETARALEIFRGEM 207
Query: 206 SR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+R AP T N ++ G +S ++ A + E+V RG P VVTYN ID CK G
Sbjct: 208 ARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDL 267
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK--PDIGAYN 321
+A RL +M +C+P++ T + LI+G V I +AR+L EM +++ P+I YN
Sbjct: 268 EEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYN 327
Query: 322 AMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ + L + A ELM + + R+ D VT+ T+ GL K ++ C ++D MI
Sbjct: 328 SFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 387
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
G +VP T L+ C +++ + ++D+G P +LV C R +
Sbjct: 388 AGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVD 447
Query: 440 EAFE 443
EA E
Sbjct: 448 EALE 451
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 173/394 (43%), Gaps = 20/394 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQ----RTHPSLLTLKSMSIMLSRISKFQSYE 156
P + L L + +A ELM ++ R P +T S ++ + K +
Sbjct: 321 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF---STLIDGLCKCGQID 377
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M G +N L+ C +M+ A ++ ++ + P+ T
Sbjct: 378 EACSVFDDM----IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 433
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME- 274
++L+ F ++ V H M RG P+VVT+N IDG CK G+A ++F++M
Sbjct: 434 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMAL 493
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ +P T TLI G QA L D MP PD A+N I+ L + D++
Sbjct: 494 KHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCINGLSKLGDVS 549
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+++ + M E + D VT++ + G K+ E L++ M+ P T L+
Sbjct: 550 RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 609
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C +V+ ++ + + G P+ + LV GLC GR EEA + ++M+
Sbjct: 610 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 669
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
+Y L L +A+ + +D +++ L++
Sbjct: 670 PDSITYGSLVYALCRAS---RTDDALQLVSELKS 700
Score = 115 bits (289), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 172/411 (41%), Gaps = 42/411 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+P F + L + D+A + + P+++T ++ L + K +
Sbjct: 357 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHA 416
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+E+ +++ + + + +VL+ AFC + EA + + SR PN T N
Sbjct: 417 MIESM--VDKGVTPDVITY-----SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 469
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKG-------------- 261
++ G +S + +M L+ G P +TY IDG + G
Sbjct: 470 SIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD 529
Query: 262 --------C------FGD---AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
C GD A++++ M + +P T LI GA N QA L
Sbjct: 530 PDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASAL 589
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F+EM +NL+PD+ + A+I L + + AA +++D M + + VTY+ + GL K
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
S +E C+ + M+ VP + T L+ C R D L L L G+ P
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
++LV GL G+ E+A ++M+ + +Y L L +A E+
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEE 760
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 162/392 (41%), Gaps = 19/392 (4%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
+VL F S +ALE + TP F + L + +A+++ +
Sbjct: 434 SVLVDAFCKASRVDEALELLH-GMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMA 492
Query: 131 RTH---PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
H P +T ++ L R + E L+A + + FN +
Sbjct: 493 LKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPD-----------TYAFNCCING 541
Query: 188 FCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
++ A V+ ++L P+ T NIL+ G ++G+ + EMV + +P
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
V+T+ IDG CK G A + + M + P++ T L+HG I +A Q +
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM PD Y +++ +L R + A++L+ E++ D VTY+ + GL KS
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 721
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL---IDRGFCPHGH 423
E + + M+ P T L+ C ++ L G + + R P+
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV 781
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+L+ GLC GR +EA E ++M+ + V
Sbjct: 782 TYSVLINGLCKVGRIDEARELIQEMMRKSCDV 813
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 165/400 (41%), Gaps = 56/400 (14%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH----PSLLTLKSMSIMLSRISKFQSYE 156
P + ++ L ++ D+A EL+ + R P+++T S L + S
Sbjct: 284 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM----- 338
Query: 157 ETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
T EA + M R + G + + F+ L+ C ++ EA SVF +++ + PN
Sbjct: 339 -TAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 396
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G ++ + MV +G P V+TY++ +D +CK +A+ L M
Sbjct: 397 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 456
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP-KRNLKPDIGAYNAMISSLIRCRD 332
C P++ T ++I G +A Q+FD+M K L PD Y +I L R
Sbjct: 457 ASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGR 516
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
A L+D M + D ++ GL K + ++Y+RM+E + VP T
Sbjct: 517 AGQAEALLDAMPDP----DTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT--- 569
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++L+ G C G +E+A ++M+ +
Sbjct: 570 --------------------------------FNILIAGACKAGNFEQASALFEEMVAKN 597
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
Q ++ L L +A E D+ ++ NL +PP
Sbjct: 598 LQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG--VPP 635
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 135/310 (43%), Gaps = 12/310 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + ++ +SK L+ ++RM V + FN+L+ C ++A ++
Sbjct: 534 AFNCCINGLSKLGDVSRALQVYNRMLELELVPDKV----TFNILIAGACKAGNFEQASAL 589
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F +++++ P+ T L+ G ++G V A M G P+VVTYN + G CK
Sbjct: 590 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCK 649
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A + EEM C+P T +L++ A QL E+ PD
Sbjct: 650 SGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVT 709
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM- 378
YN ++ L + A+ +++EM K D VTY+T+ L K+ LE +L+ M
Sbjct: 710 YNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMS 769
Query: 379 --IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC---PHGHALDLLVTGLC 433
+ VP T +L+ C R+D L ++ R C P+ + + GLC
Sbjct: 770 SRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMM-RKSCDVLPNIITYNSFLDGLC 828
Query: 434 SRGRWEEAFE 443
+ EA E
Sbjct: 829 KQSMMAEACE 838
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/353 (22%), Positives = 143/353 (40%), Gaps = 38/353 (10%)
Query: 124 ELMSHVQRTH-PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
++ S V R P+++T + L ++ + E ++ R ++ I + N
Sbjct: 767 DMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITY-----N 821
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS---RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
L C Q M EA + L R +P+ T + L+ G + G + +M+
Sbjct: 822 SFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMI 881
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G+ P+VVTYN+ ++G CK A + E M P + T + L+ ++
Sbjct: 882 AGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVD 941
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHTM 358
+A +L M R P++ +N++I L + A ++ D+M K + D +TY T+
Sbjct: 942 EALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTL 1001
Query: 359 FFGLMKSS----------------------GLEGVCKLYD------RMIEGKFVPKTRTV 390
GL ++ + G+ KL D RM+E + VP T
Sbjct: 1002 IDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTF 1061
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+L+ C + L+ ++ + P L+ GLC G+ E ++
Sbjct: 1062 NILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWD 1114
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 78/190 (41%), Gaps = 30/190 (15%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ AFC + EA + + SR PN T N ++ G +S + +M
Sbjct: 927 YSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMT 986
Query: 240 LR-GFRPSVVTYNIRIDGYCKKG----------------------C------FGDAMRLF 270
L+ G P +TY IDG + G C GD R
Sbjct: 987 LKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRAL 1046
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
M + +P T LI GA N QA LF+EM +NL+PD+ + A+I L +
Sbjct: 1047 HRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKA 1106
Query: 331 RDLNAAMELM 340
+ A ++M
Sbjct: 1107 GQVEATWDIM 1116
>gi|356560394|ref|XP_003548477.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 612
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 110/417 (26%), Positives = 192/417 (46%), Gaps = 13/417 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS LV VL R ++ A FF + + P + + + + IL +MR FD AW
Sbjct: 156 LSPELVVEVLSR---TRNDWEAAFTFFLWAGKQPGYAHSVREYHSMISILGKMRKFDTAW 212
Query: 124 ELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
L+ ++ R SL+T +++ IM+ + + F +R F + G EEF
Sbjct: 213 NLIEEMRGGRNGLSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKRFNF----RVGLEEF 268
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA-MEMFYHEMVL 240
+ LL A C K +++A + F + K+ NI+L G+ T+ E +HEM+
Sbjct: 269 HSLLSALCRYKNVQDAEYLLFCNKDVFPLDTKSFNIILNGWCNLIVSTSHAERIWHEMIK 328
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R + VV+Y I Y K +R+F+EM++ P + +I+ R + +
Sbjct: 329 RRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRLVKE 388
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L M ++ PD+ YN++I L + ++ A +L DEM ++ + T+H FF
Sbjct: 389 AVNLIGTMEGNDVTPDVVTYNSLIKPLCKAHKVDEAKQLFDEMLKRHLSPTIQTFHA-FF 447
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
++++ E V +L D+M E + P T +ML++ FC ++D +W + +
Sbjct: 448 RILRTK--EEVFELLDKMKELRCYPTIETYIMLIRKFCRWCQLDDVFKIWDAMREDEISH 505
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
+ +L+ GL G+ EEA +M + + MLQ ++ A E E
Sbjct: 506 DRSSYIVLIHGLFLNGKLEEAQRYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQE 562
>gi|242087579|ref|XP_002439622.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
gi|241944907|gb|EES18052.1| hypothetical protein SORBIDRAFT_09g017100 [Sorghum bicolor]
Length = 657
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 194/425 (45%), Gaps = 10/425 (2%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ PL +V VL R AH + FF++ FT T + K LHIL + R F+
Sbjct: 191 SPPLCEAVVLAVLHRFKHAHR---PSYRFFRWATASGGFTHTTITYCKMLHILGKTRQFE 247
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
++ + + L++ + + + + + + F+ M++ F G E
Sbjct: 248 MMVAIIQEMGKV--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMKKNGF----DDGVES 301
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +EAR VF K+ +++P+ ++ L+L + + ++ ++EM+
Sbjct: 302 FNCLLVALANEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 361
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G +P VV +N I+G + +A+++FE M+ P++ T T LI +
Sbjct: 362 KGMKPDVVVHNTMIEGLLRGQRRPEALKMFELMKAKGPPPNVWTYTMLIRDHCKRGKMDM 421
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + F+EM + +PD+ Y ++ + ++ +++EM +K D TY+ +
Sbjct: 422 AMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIK 481
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLIDRGFC 419
L + ++Y +MI+ P T M+MK +F + +G +W + RG C
Sbjct: 482 LLTNRKMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGIC 541
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++ + + G GR EEA++ ++M+ + + Y +A + L +L
Sbjct: 542 PDVNSYTVFINGHIRHGRPEEAYKYIEEMINKGMTAPQIDYNKFAADFSKAGKPDILYEL 601
Query: 480 DRMIK 484
+K
Sbjct: 602 ALKVK 606
>gi|147767159|emb|CAN71515.1| hypothetical protein VITISV_021787 [Vitis vinifera]
Length = 655
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 110/418 (26%), Positives = 183/418 (43%), Gaps = 20/418 (4%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S L E VL R A + G + FF + + P + + + ++ + IL +MR F W L
Sbjct: 121 SGLTERVLNRCGDAGNLGYR---FFVWASKQPGYRHSYEVYKAMIKILGKMRQFGAVWAL 177
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----F 181
+ ++R +P ++ +++ R + + ++ +E D M K+G E F
Sbjct: 178 IEEMRRENPQFVSPYVFVVLMRRFASARMVKKAIEVLDEMP--------KYGCEPDEHVF 229
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
LL A C +KEA S+F + RF P K LL G+ G + + ++
Sbjct: 230 GCLLDALCKNGSVKEAASLFEDMRIRFTPTLKHFTSLLYGWCREGKLMEAKYVLVQIREA 289
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF P +V YN + GY G DA L +EM R C P++ + TTLI + + +A
Sbjct: 290 GFEPDIVVYNNLLTGYAAAGKMVDAYDLLKEMRRKECEPNVMSFTTLIQALCAKKKMEEA 349
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMF 359
++F EM D Y +IS + ++ EL+D M ++ GH + +TY +
Sbjct: 350 MRVFFEMQSCGCPADAVTYTTLISGFCKWGKISKGYELLDNMIQQ--GHIPNPMTYLHIM 407
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K LE +L + M + P ++++ C + G+ +W + G
Sbjct: 408 AAHEKKEELEECIELMEEMRKIGCTPDLNIYNIVIRLACKLGEIKEGVRVWNEMEATGLS 467
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P +++ G S+ EA E K+M V R +S Y L+ L EKLE
Sbjct: 468 PGLDTFVIMIHGFLSQRCLVEACEFFKEM-VGRGLLSAPQYGTLKELLNSLLRAEKLE 524
>gi|226509960|ref|NP_001150456.1| LOC100284086 [Zea mays]
gi|195639404|gb|ACG39170.1| ATP binding protein [Zea mays]
Length = 634
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 111/481 (23%), Positives = 213/481 (44%), Gaps = 19/481 (3%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIERITRIIND--HPFPDQPLHPTLLQHLPQTTPL 64
L SD+ G S++ A + ++R+ I D D L L P PL
Sbjct: 140 LAASDEDQGSSEQEA----AASNPEGVDRVCAAIADVVASGADANLEAALSALSP---PL 192
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
+V VL R AH + FF++ FT T + K LHIL + R F+
Sbjct: 193 CEAVVLAVLHRFKHAHRPSYR---FFRWATVSGGFTHTTITYCKMLHILGKTRQFESMVA 249
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
++ + + L++ + + + + + + F+ M + F G E FN L
Sbjct: 250 MIQEMGKA--GALSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGF----DDGVESFNCL 303
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
L A + +EAR VF K+ +++P+ ++ L+L + + ++ ++EM+ +G
Sbjct: 304 LVALAKEGLGREARQVFDKMHGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLEKGMD 363
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VV +N I+G + +A+++FE M+ P++ T T LI + A +
Sbjct: 364 PDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKMDMAMEC 423
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F+EM + +PD+ Y ++ + ++ +++EM +K D TY+ + L
Sbjct: 424 FEEMQEAKCQPDVATYTCLLVGYGNAKQMDRVTAVLEEMTQKGCPPDARTYNALIKLLTN 483
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ + ++Y +MI+ P T M+MK +F + +G +W + RG CP +
Sbjct: 484 RNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFVGDSNYAMGCAVWEEMHQRGICPDVN 543
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ + + GR EEA++ ++M+ + + + Y +A + L +L + +
Sbjct: 544 SYTVFINRHIRHGRPEEAYKYIEEMINKGMKAPQIDYNKFAADFSKAGKPDILFELAQKV 603
Query: 484 K 484
K
Sbjct: 604 K 604
>gi|147767652|emb|CAN77908.1| hypothetical protein VITISV_033177 [Vitis vinifera]
Length = 1563
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 216/467 (46%), Gaps = 26/467 (5%)
Query: 41 NDHPFPDQP-LHPTL------LQHLPQTTPLSSTLVENVLGRLFAAHSNGL---KALEFF 90
N +P P P H T+ + +SS +V V+ + +G+ + L FF
Sbjct: 1107 NTNPDPISPNPHYTIASLSFDFSQISSADSVSSAIVRRVIEKCGGVR-HGIPFPQTLAFF 1165
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ F +P+ + + + + ++R FD AW+L+ + +T + +++ +I++ R
Sbjct: 1166 NWATNLEEFGHSPEPYMEMIDLAGKVRQFDLAWQLID-LMKTRNVEIPVETFTILVRRYV 1224
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS 206
K E + AF+RME +G + F+V++ + ++ EA+S F L
Sbjct: 1225 KAGLAAEAVHAFNRME--------DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKD 1276
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
RF P+ L+ G+ +G+++ E + EM + G P+V TY+I ID C+ G A
Sbjct: 1277 RFEPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIXPNVYTYSIVIDALCRSGQITRA 1336
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+F EM V C P+ T L+ + Q++++M + PD YN +I S
Sbjct: 1337 HDVFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIES 1396
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R +L A+++++ + +K + +++ +F + K + +++ +M + K P
Sbjct: 1397 HCRDDNLEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPN 1455
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T T +LM+ F D+ L L + + P+ + +L++ C G W A+ K
Sbjct: 1456 TVTYNILMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFK 1515
Query: 447 QMLVRR-RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+M+ + + S Y M+ + L +A +K E+L + N V P
Sbjct: 1516 EMIEEKCLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 1562
>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
Length = 564
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 6/270 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
++N++LQ+ C + A +F ++R AP T N ++ G +S D+ A + E
Sbjct: 3 DYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEE 62
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+V RG P VVTYN ID CK G +A RL +M C+P++ T + LI+G V
Sbjct: 63 LVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGR 122
Query: 298 IHQARQLFDEMPKRNLK--PDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNV 353
I +AR+L EM +++ P+I YN+ + L + A ELM + + R+ D V
Sbjct: 123 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 182
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ GL K ++ C ++D MI G +VP T L+ C +++ + +
Sbjct: 183 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 242
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+D+G P +LV C R +EA E
Sbjct: 243 VDKGVTPDVITYSVLVDAFCKASRVDEALE 272
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/366 (27%), Positives = 169/366 (46%), Gaps = 19/366 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH----PSLLTLKSMSIMLSRISKFQSYE 156
P + ++ L ++ D+A EL+ + R P+++T S L + S
Sbjct: 105 PNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM----- 159
Query: 157 ETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
T EA + M R + G + + F+ L+ C ++ EA SVF +++ + PN
Sbjct: 160 -TAEACELM-RSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G ++ + MV +G P V+TY++ +D +CK +A+ L M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277
Query: 274 ERVACLPSL-----QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
C P++ T LI GA N QA LF+EM +NL+PD+ + A+I L
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ + AA +++D M + + VTY+ + GL KS +E C+ + M+ VP +
Sbjct: 338 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 397
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C R D L L L G+ P ++LV GL G+ E+A ++M
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457
Query: 449 LVRRRQ 454
+ + Q
Sbjct: 458 VGKGHQ 463
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 90/407 (22%), Positives = 166/407 (40%), Gaps = 20/407 (4%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ----RTHPSLLTLKSMSIML 146
+ T + P + L L + +A ELM ++ R P +T S ++
Sbjct: 132 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTF---STLI 188
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ K +E FD M G +N L+ C +M+ A ++ ++
Sbjct: 189 DGLCKCGQIDEACSVFDDM----IAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVD 244
Query: 207 R-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV-----VTYNIRIDGYCKK 260
+ P+ T ++L+ F ++ V H M RG P+V VT+NI I G CK
Sbjct: 245 KGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKA 304
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G F A LFEEM P + T LI G + AR + D M + P++ Y
Sbjct: 305 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTY 364
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA++ L + + A + ++EM D++TY ++ + L ++S + +L +
Sbjct: 365 NALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKS 424
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ P T T +L+ + + + + + ++ +G P +GL G
Sbjct: 425 FGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAG 484
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
E + +L + + + ++ ++ KL+D+ MIK +
Sbjct: 485 TMELLRVVLAKGMLPDATTCSSILDWVCRSG---KLDDVKAMIKEFE 528
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 1/133 (0%)
Query: 317 IGAYNAMISSLIRCRDLNAAMELM-DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+ YN ++ SL R D A+E+ EM + VTY+T+ GL KS+ L +L+
Sbjct: 1 VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
+ ++E P T L+ C ++ L G + RG P+ +L+ GLC
Sbjct: 61 EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120
Query: 436 GRWEEAFECSKQM 448
GR +EA E ++M
Sbjct: 121 GRIDEARELIQEM 133
>gi|357115308|ref|XP_003559432.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Brachypodium distachyon]
Length = 570
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 204/452 (45%), Gaps = 14/452 (3%)
Query: 31 SEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFF 90
++I+ ++RI++ H F + P +S +V+ +L R S+ + A FF
Sbjct: 94 ADIDEVSRILSSH-FASPEAIVIAMDCCP--VRVSGRMVDKILRRF---GSDWVAAFGFF 147
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ + D + + IL + + FD W L+ + L++L +M+ ++ R++
Sbjct: 148 MWAGAQEGYCHHADLYNLMVDILGKFKQFDLLWGLIRQMDEIG-CLVSLATMTKVMRRLA 206
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP 210
+ + ++AF++M++ F +R ++ N LL C +K +K AR VF +L P
Sbjct: 207 GANRWTDAIDAFNKMDQ--FGVVRD--TKAMNALLDTLCKEKSVKRARGVFQELRGVVPP 262
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + N L+ G+ ++ + EM GF PSV+TY I+ YC + F +
Sbjct: 263 DESSFNTLVHGWCQARMLNEARDTMKEMEEHGFSPSVITYTSLIEAYCMEKDFQTVYAIL 322
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EM C P++ T T ++H G +A +FD++ + PD YN++I L R
Sbjct: 323 NEMCSKGCRPNVITYTIVMHALGKAGRTQEALDVFDKVKRDGCVPDASFYNSIIYILGRA 382
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
L A + DEM I ++TM S E K+ +M E P +T
Sbjct: 383 GRLEDANSVFDEMCRTGIPPTVAIFNTMISAACDHSQAENALKILVKMEEQSCKPDIKTY 442
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
L+K C + + L ++ + P LLVT LC G+ ++ ++M++
Sbjct: 443 TPLLKLCCKRQWMKILPFLICHMFRKDISPDFSTYILLVTWLCRNGKPAQSCLFLEEMVL 502
Query: 451 RRRQVSEASYRMLQRYLVQAN---ANEKLEDL 479
+ + ++ ++ L + N A +K++ L
Sbjct: 503 KGFMPKQETFDLVMEKLDKGNLHSAKKKIQHL 534
>gi|15228825|ref|NP_188906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274241|sp|Q9LUJ4.1|PP248_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22670, mitochondrial; Flags: Precursor
gi|9279685|dbj|BAB01242.1| unnamed protein product [Arabidopsis thaliana]
gi|332643142|gb|AEE76663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 562
Score = 142 bits (357), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 108/397 (27%), Positives = 187/397 (47%), Gaps = 13/397 (3%)
Query: 51 HPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGL-KALEFFKFTLQHPHFTPTPDAFEK 108
H +++ L + ++ +LV VL R SNG +A FF + + + +
Sbjct: 116 HEDVVKELSKCDVVVTESLVLQVLRRF----SNGWNQAYGFFIWANSQTGYVHSGHTYNA 171
Query: 109 TLHILARMRYFDQAWELMSHVQRTHPS-LLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+ +L + R FD WEL++ + + S L+TL +MS ++ R++K Y + ++AF ME+
Sbjct: 172 MVDVLGKCRNFDLMWELVNEMNKNEESKLVTLDTMSKVMRRLAKSGKYNKAVDAFLEMEK 231
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
V K + N L+ A + ++ A VF+KL P+ +T NIL+ GF ++
Sbjct: 232 SYGV---KTDTIAMNSLMDALVKENSIEHAHEVFLKLFDTIKPDARTFNILIHGFCKARK 288
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
M + F P VVTY ++ YCK+G F + EEM C P++ T T
Sbjct: 289 FDDARAMMDLMKVTEFTPDVVTYTSFVEAYCKEGDFRRVNEMLEEMRENGCNPNVVTYTI 348
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++H G + + +A ++++M + PD Y+++I L + A E+ ++M +
Sbjct: 349 VMHSLGKSKQVAEALGVYEKMKEDGCVPDAKFYSSLIHILSKTGRFKDAAEIFEDMTNQG 408
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM--IEGKFV-PKTRTVVMLMKFFCVNFRVD 404
+ D + Y+TM + S E +L RM EG+ P T L+K C ++
Sbjct: 409 VRRDVLVYNTMISAALHHSRDEMALRLLKRMEDEEGESCSPNVETYAPLLKMCCHKKKMK 468
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L L +++ LL+ GLC G+ EEA
Sbjct: 469 LLGILLHHMVKNDVSIDVSTYILLIRGLCMSGKVEEA 505
>gi|413949009|gb|AFW81658.1| hypothetical protein ZEAMMB73_233967 [Zea mays]
Length = 637
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 196/425 (46%), Gaps = 10/425 (2%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ PL +V VL R AH + FF++ FT T + K L IL + R F+
Sbjct: 187 SPPLCEAVVLAVLHRFKHAHR---PSYRFFRWATASGGFTHTTITYCKMLLILGKTRQFE 243
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
L+ + + L++ + + + + + + F+ M + F G E
Sbjct: 244 SMVALLQEMGKA--GTLSMDAFKVAIKSFAAAGEIKNAVGVFELMRKNGF----DDGVES 297
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +EAR VF K+L +++P+ ++ L+L + + ++ ++EM+
Sbjct: 298 FNCLLVALANEGLGREARQVFDKMLGQYSPDLRSYTALMLAWCNARNLVEAGRVWNEMLE 357
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G +P VV +N I+G + +A+++FE M+ P++ T T LI +
Sbjct: 358 KGMKPDVVVHNTMIEGLLRGQRQHEAVKMFELMKAKGPPPNVWTYTMLICNHCKRGKMDM 417
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + F+EM + +PD+ Y ++ + ++ +++EM +K D TY+ +
Sbjct: 418 AMECFEEMQEARCQPDVATYTCLLVGYGNAKRMDRVTAVLEEMTQKGCPPDARTYNALIK 477
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLIDRGFC 419
L + ++Y +MI+ P T M+MK +F + +G +W + RG C
Sbjct: 478 LLTNRKMPDDAARIYKKMIKKGLDPTIHTYNMMMKSYFLGDRNYAMGCAVWEEMHRRGIC 537
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++ + ++G GR EEA++ ++M+ + + + L +A + L +L
Sbjct: 538 PDVNSYTVFISGHIRHGRPEEAYKYIEEMINKGMKAPQIDCNKFAADLSKAGKLDMLYEL 597
Query: 480 DRMIK 484
+ +K
Sbjct: 598 AQKVK 602
>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
lyrata]
Length = 790
Score = 142 bits (357), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 115/462 (24%), Positives = 216/462 (46%), Gaps = 38/462 (8%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P+ +P+L LP TP + + LF+ + + AL+F + Q P+F D+
Sbjct: 51 PNWQNNPSLKSLLPAITP-------SHVSSLFSLNLDPHTALQFSYWISQTPNFKHNVDS 103
Query: 106 FEKTLHILARMRYFDQ--------------------AWELMSHVQRTHPSLLTLKSMSIM 145
+ L ++ + ++ + + + L+LK + +
Sbjct: 104 YASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVSDICRKMSKDDITKLSLKCYNEL 163
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L+ +++F +E + + M E FV + + FN+++ +C +KEA+ K++
Sbjct: 164 LTLLARFGLVDEMNQLYTEMLEE-FVSMDIY---TFNLMINVYCKMGFVKEAKQFMCKMI 219
Query: 206 -SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ +P+ T +LG+ S DV + + EM R + V+YN I G C+ G
Sbjct: 220 QAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNR----NEVSYNQLIHGLCEAGRID 275
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ LF M+ C P++ T T LI G +N+H+A L DEM +RNL PD+ YN++I
Sbjct: 276 EAVSLFVRMKDDCCYPNVYTYTALIKGL-CRKNVHKAMGLLDEMLERNLVPDLITYNSLI 334
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L++A L+ M+E+ + D TY L KS+ +E +L+D + E
Sbjct: 335 AGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVS 394
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
+L+ +C +VD L+ ++ + P+ + + L+ GLCS G +EA
Sbjct: 395 ANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSL 454
Query: 445 SKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDRMIKN 485
QM+ + + ++ +L R L Q + ++ + L +M+ +
Sbjct: 455 FDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSS 496
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/387 (21%), Positives = 157/387 (40%), Gaps = 19/387 (4%)
Query: 102 TPDAFEKTLHILA--RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
+PD F T IL R + D A+ + + + S + ++ + + +E +
Sbjct: 224 SPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEV-----SYNQLIHGLCEAGRIDEAV 278
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
F RM+ + + L++ C +K + +A + ++L R P+ T N L
Sbjct: 279 SLFVRMKDDCCYP----NVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSL 333
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G +G + + M RG P TY ID CK +A RLF+ +
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
++ + LI G V + +A LF++M +N P+ +NA+I L +L A+
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L D+M + + T++ + ++K + K +M+ P RT ++ +C
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYC 513
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+V ++ + + G P L+ G AF+ K M + S
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHH 573
Query: 459 SYRML------QRYLVQANANEKLEDL 479
++ L +RY+V+ + +E +
Sbjct: 574 TFLSLIKQLFDKRYVVEKSGETGVESV 600
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/336 (21%), Positives = 126/336 (37%), Gaps = 31/336 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ C+ +KEA S+F +++ P T NIL+ + GD +M+
Sbjct: 435 FNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMM 494
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P TYN I+ YC G +A + +M+ P T T+LI G + +
Sbjct: 495 SSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTY 554
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCR---------------------------- 331
A + M + +P + ++I L R
Sbjct: 555 SAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKM 614
Query: 332 -DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+ + +EL +EME+ D+ Y + G+ K L KL D+M + P
Sbjct: 615 MEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVF 674
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++ C + N+ +I G P L+ GL G E K++
Sbjct: 675 NAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRG 734
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKN 485
E ++++L +++ E+ L + M KN
Sbjct: 735 CGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKN 770
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/342 (21%), Positives = 130/342 (38%), Gaps = 34/342 (9%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKT 214
+E L FD+M + +G++ FN+L+ Q + +A K++S P +T
Sbjct: 449 KEALSLFDQMVK---MGLKP-TVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVART 504
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N + + +G V E +M G P TY I Y K G A + + M
Sbjct: 505 YNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMF 564
Query: 275 RVACLPSLQTITTLIH---------------GAGLVRNIHQAR--------------QLF 305
C PS T +LI G V N +LF
Sbjct: 565 DADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEFDIVIELF 624
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+EM K PD Y +IS + + +L A++L+D+M+++ I + ++ + K
Sbjct: 625 EEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKL 684
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ + MI P+ L+ + G +++ L G+ A
Sbjct: 685 QKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAW 744
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+L+ G+ +G EE + ++M S +Y +L + L
Sbjct: 745 KILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 9/181 (4%)
Query: 115 RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
+M FD EL +++ H K ++S I K ++ L+ D+M++E GI
Sbjct: 613 KMMEFDIVIELFEEMEK-HGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKE---GIS 668
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEM 233
FN ++ C ++ EA ++ ++ S +P + L+ G E G+
Sbjct: 669 P-SEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNS 727
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL---IH 290
+ ++ G+ + + I IDG K+G + +LFEEME+ C S +T + L +H
Sbjct: 728 VFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLH 787
Query: 291 G 291
G
Sbjct: 788 G 788
>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
Length = 585
Score = 141 bits (356), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 108/416 (25%), Positives = 185/416 (44%), Gaps = 18/416 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIM 145
+ FK LQ H T F L+ L A +L + + PSL+T ++
Sbjct: 131 KMFKLGLQPTHVT-----FGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTI--- 182
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + K L+ +ME + G + +N ++ + C + EA F +++
Sbjct: 183 IKGLCKIGHTTNALQLLKKMEEK---GCKP-DVVAYNTVIDSLCKDRRANEAMYFFSEMV 238
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ PN T + +L GF G + + +M+ R P+ VT+ I +DG CK+G
Sbjct: 239 DQGIPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMIL 298
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A R+FE M P T + L+ G L + +A++LFD M + P + YN +I
Sbjct: 299 EARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILI 358
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + R LN A L+ EM ++ + D VTY T+ G ++ + KL+ M +
Sbjct: 359 NGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLL 418
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + T +L+ C + +D L + + PH ++L+ G+C+ G+ E A E
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAREL 478
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
+ V+ Q S +Y M+ L + +NE E +M+ N LP VA
Sbjct: 479 FSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVN--GCLPNSCTYNVA 532
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 141/305 (46%), Gaps = 2/305 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ +L FC ++ EA S+F +++ R PN T IL+ G + G + + M
Sbjct: 249 YSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMT 308
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P TY+ +DGYC + +A +LF+ M PS++ LI+G R ++
Sbjct: 309 ENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLN 368
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM R+L PD Y+ ++ + A +L EM + D++TY +
Sbjct: 369 EAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILL 428
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +L M E K P +L++ C +++ L+ L +G
Sbjct: 429 DGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQ 488
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLED 478
P ++++GL G EA E ++M+V + +Y + +Q +L + + +
Sbjct: 489 PSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRL 548
Query: 479 LDRMI 483
++ M+
Sbjct: 549 IEEMV 553
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 146/332 (43%), Gaps = 10/332 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + LH + ++A L + + P+ +T +I++ + K E
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTF---TILVDGLCKEGMILEA 300
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
F+ M G+ + ++ L+ +C Q +M EA+ +F ++ + FAP+ + NI
Sbjct: 301 RRVFEMMTEN---GVEP-DAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNI 356
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G +S + + EM R P VTY+ + G+C+ G A +LF+EM
Sbjct: 357 LINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYG 416
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
LP T + L+ G ++ +A +L M + ++P I YN +I + L AA
Sbjct: 417 LLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAAR 476
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL + K I VTY M GL+K C+++ +M+ +P + T + ++ F
Sbjct: 477 ELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGF 536
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
N + L ++ RGF +L+
Sbjct: 537 LRNGDPSNAVRLIEEMVGRGFSADSSTFQMLL 568
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 114/284 (40%), Gaps = 42/284 (14%)
Query: 187 AFCTQ----KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
FC+ + +A + F +LL R P N LL + + + +M L
Sbjct: 39 GFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLS 98
Query: 242 GFRPSVVTYNIRIDGYC--KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RP+V T I I+ C + A +M ++ P+ T TL++G I
Sbjct: 99 NIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKII 158
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LFDE+ K P + Y +I L + A++L+ +MEEK D V Y+T+
Sbjct: 159 DAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTV- 217
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
++ +CK DR R + + + ++D+G
Sbjct: 218 --------IDSLCK--DR------------------------RANEAMYFFSEMVDQGIP 243
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ ++ G C+ G+ EA KQM+ R + ++ +L
Sbjct: 244 PNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTIL 287
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD+ ++ + L + + D+A+ L+ +Q + P + +I++ + F E
Sbjct: 419 PDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIY---NILIQGMCNFGKLEAA 475
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
E F + FV + + V++ + EA +F K++ PN+ T N+
Sbjct: 476 RELFSNL----FVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNV 531
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
+ GF +GD + EMV RGF T+ + +D
Sbjct: 532 AIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQMLLD 569
>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
Length = 471
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 153/310 (49%), Gaps = 9/310 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N LL AFC + +MKEA +F + + F P+ T + ++ G ++G VT A+EM +H+M
Sbjct: 81 YNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKM 140
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ RG + V YN I+G CK A +L EEM +P T T++ G + +
Sbjct: 141 IERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKV 200
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A+Q FD MP R PD+ AYN ++ +L + + AM+L ++ K D VTY+++
Sbjct: 201 SEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSI 260
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL + S ++ +++ +M+ P T +++ C +VD + + G
Sbjct: 261 LLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGA 320
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P ++L+ GLC ++A E M+ SY ++ L + N K+ D
Sbjct: 321 VPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN---KVHD 377
Query: 479 ----LDRMIK 484
DRMI+
Sbjct: 378 ARVLFDRMIE 387
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 166/353 (47%), Gaps = 13/353 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ + L+ + +A EL + P ++T S ++S + K E
Sbjct: 76 PSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTY---STIISGLCKTGKVTEA 132
Query: 159 LEA-FDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
LE F +M ER + +N L+ C + ++ A + ++ S+ + P+N T
Sbjct: 133 LEMLFHKMIERGCSAN-----TVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITY 187
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N +L G G V+ + F+ M RG+ P VV YN +D K+G +AM+LF+++
Sbjct: 188 NTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIA 247
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P T +++ G N+ +A ++F +M P+ Y+ ++S R + ++
Sbjct: 248 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDD 307
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A ++++EM + D VTY+ + GL K++ ++ +L+ M++ P + +++
Sbjct: 308 AHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLN 367
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C +V L+ +I+R P ++L+ GLC G+ +EA + QM
Sbjct: 368 GLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 132/277 (47%), Gaps = 2/277 (0%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
+PN T ++L F + G + + +M+ G P + YNI IDGY KKG +A R
Sbjct: 5 SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L+EEM V PS+ T +L++ + +A +LF M ++ +PD+ Y+ +IS L
Sbjct: 65 LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124
Query: 329 RCRDLNAAMELM-DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ + A+E++ +M E+ + V Y+ + GL K +E KL + M +VP
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T ++ C +V + + RG+ P A + L+ L G+ +EA + K
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKD 244
Query: 448 MLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMI 483
++ + +Y + L ++N +E E +M+
Sbjct: 245 VIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMV 281
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 96/203 (47%), Gaps = 1/203 (0%)
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+R P+ T+ + + +CK+G D +LFE+M P LI G +
Sbjct: 1 MRECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVD 60
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L++EM L+P I YN+++++ + + AMEL M EK D VTY T+
Sbjct: 61 EANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTII 120
Query: 360 FGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ + E + L+ +MIE T L+ C + ++ L + +G+
Sbjct: 121 SGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGY 180
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P + +++GLC G+ EA
Sbjct: 181 VPDNITYNTILSGLCRMGKVSEA 203
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 77/178 (43%), Gaps = 7/178 (3%)
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R P+ + ++ S + L +L ++M + I D + Y+ + G K ++
Sbjct: 2 RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+LY+ M+ P T L+ FC ++ + L+ + ++GF P +++
Sbjct: 62 ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121
Query: 431 GLCSRGRWEEAFE-CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
GLC G+ EA E +M+ R + +Y L L K E+++R K L+
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLC------KDENIERAYKLLE 173
>gi|224107985|ref|XP_002314678.1| predicted protein [Populus trichocarpa]
gi|222863718|gb|EEF00849.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/423 (23%), Positives = 200/423 (47%), Gaps = 16/423 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
++ LV +L R F +H + A F + + TP+ ++ + IL + + F W
Sbjct: 87 TNELVSQILMR-FDSHC--VVAFGVFIWAKNQTSYVHTPELYDYMIDILGKFKKFSLMWS 143
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS----EE 180
L+ ++ + ++L + S ++ R++K + Y++ ++ +F GI K+G+ E
Sbjct: 144 LVEQMKGLN-GYVSLATASKVMRRLAKARKYKDAID--------VFRGIEKYGASKDREA 194
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
NVL+ A + ++++A S F++ ++ + NIL+ G+ ++ EM
Sbjct: 195 LNVLMDALVKEGDVEDAHSAFLEFKDCITLDSSSFNILIHGYCKARMFVVARKIMEEMEK 254
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF P VV+Y+ I YC++ F + +F+EM+ C P++ T TT++H G R +++
Sbjct: 255 HGFHPDVVSYSCFIAAYCEQKDFRNVEAVFDEMQEKGCKPNVITYTTVMHALGKARQLNE 314
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +++++M + PD Y+++I L + + A ++ ++ME++ + + Y+TM
Sbjct: 315 ALEVYEKMKRNGCLPDSKFYSSLIYVLSQSGRIKDAWDVFEDMEKQGVCRNLWVYNTMIS 374
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
S KL +RM P +T L+K C + L L ++
Sbjct: 375 SACAHSQGGSALKLLERMEGDSCKPDVKTYAPLLKMCCRRKSIKLLKFLLSHMFKNNVSV 434
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
LLV C G+ E A ++ +++ +++ L L Q N E E ++
Sbjct: 435 DLGTYTLLVNEFCRNGKLEHACFYFQEAVLKGMVPMVKTFKALVEELEQKNMKEMKEKIE 494
Query: 481 RMI 483
+++
Sbjct: 495 KLM 497
>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
Length = 331
Score = 141 bits (355), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 162/312 (51%), Gaps = 7/312 (2%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ R+ K + ++ L + M GI K + +N +L C +++++EAR +F K+
Sbjct: 15 IVERLCKTKRIDDALATVEEMATR---GI-KPDAFIYNFVLSGLCQEEKVEEARLLFEKM 70
Query: 205 LS-RFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R PN T N L+ G ++ + TA E+F EM +G+ P+ V+YN IDG+CKK
Sbjct: 71 VKQRINPNVVTYNTLINGLCKAWRIETAYELF-KEMAGKGYVPTEVSYNTLIDGFCKKKD 129
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A +F++M R C+P++ T TTLI G + A ++ D M K+ + P++ Y+
Sbjct: 130 LVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSC 189
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I + R ++ A +L+++M + I VTY+ + L ++ LE KL+ M + +
Sbjct: 190 LIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 249
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T L++ C + ++D L+ +I +G P D L GL G+ EA
Sbjct: 250 CHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQ 309
Query: 443 ECSKQMLVRRRQ 454
E ++M + +R
Sbjct: 310 ELMEKMKLTKRN 321
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 121/258 (46%), Gaps = 3/258 (1%)
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM RG +P YN + G C++ +A LFE+M + P++ T TLI+G
Sbjct: 33 EEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQRINPNVVTYNTLINGLCKA 92
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I A +LF EM + P +YN +I + +DL AA ++ D+M + VTY
Sbjct: 93 WRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTY 152
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ GL KS ++ ++ D M++ P T L+ FC RVD L ++
Sbjct: 153 TTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGFCKVRRVDEAHKLLEQMVT 212
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G P ++L+ LC + E+AF+ + M RR + +Y L R L +++
Sbjct: 213 QGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCH---HKQ 269
Query: 476 LEDLDRMIKNLQAVLPPP 493
L+ R+ + A PP
Sbjct: 270 LDGAHRLYAEMIAKGCPP 287
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 60/242 (24%), Positives = 108/242 (44%), Gaps = 3/242 (1%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P +TY ++ CK DA+ EEM P ++ G + +AR L
Sbjct: 7 PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F++M K+ + P++ YN +I+ L + + A EL EM K V+Y+T+ G K
Sbjct: 67 FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
L ++D+M+ VP T L+ + +V + ++ +G P+
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
L+ G C R +EA + +QM+ + + +Y +L L +A +KLED ++ +
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRA---DKLEDAFKLFR 243
Query: 485 NL 486
+
Sbjct: 244 GM 245
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/232 (23%), Positives = 103/232 (44%), Gaps = 13/232 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
A E FK + + PT ++ + + + A ++ + R++ P+++T ++
Sbjct: 98 AYELFK-EMAGKGYVPTEVSYNTLIDGFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLI 156
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
LS+ K Q+ E L+ +++ + + ++ L+ FC + + EA + +
Sbjct: 157 DGLSKSGKVQAAAEVLDGM--VKKGVTPNV-----ATYSCLIDGFCKVRRVDEAHKLLEQ 209
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ AP T NILL + + + M R P+VVTYN + C
Sbjct: 210 MVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTVVTYNTLLRALCHHKQ 269
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM--PKRN 312
A RL+ EM C P T TL G +H+A++L ++M KRN
Sbjct: 270 LDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEKMKLTKRN 321
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/179 (22%), Positives = 79/179 (44%), Gaps = 9/179 (5%)
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R PD Y ++ L + + ++ A+ ++EM + I D Y+ + GL + +E
Sbjct: 3 RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L+++M++ + P T L+ C +R++ L+ + +G+ P + + L+
Sbjct: 63 ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL-----VQANANEKLEDLDRMIK 484
G C + A + +M+ + +Y L L VQA A E LD M+K
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAA----EVLDGMVK 177
>gi|297743427|emb|CBI36294.3| unnamed protein product [Vitis vinifera]
Length = 517
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/422 (25%), Positives = 182/422 (43%), Gaps = 46/422 (10%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRL----FAAH 80
++ + S I I+RI++D P L L + TP LVE VL R F+AH
Sbjct: 42 NSLSSSQYINEISRILSDFRDPHHDLERPLTAFSQKITP---GLVEQVLKRCKNLGFSAH 98
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
S+ + F W+ +S ++ T + +
Sbjct: 99 SS----------------------------------KQFPLIWDFLSDMRETRCCEICPE 124
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++ + + + AF +M G+ K G + + LL C +K +K+A+
Sbjct: 125 IFWLIFRAYCRANLPGDAIRAFHQMGD---FGV-KAGVGDVDQLLYVLCKRKHVKQAQEF 180
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F K+ PN KT +IL+ G+ + GD + + EM RG VV YN ++ CK
Sbjct: 181 FDKVNVEVMPNAKTYSILMRGWGDVGDSSEARKLFEEMRERGCAVDVVAYNSLLEALCKG 240
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A +LF EM P + + I V +IH A Q+ D M + NL P++ Y
Sbjct: 241 GNVDEAYKLFREMGSNGLAPDACSYSIFIRAYCEVNDIHSAFQVLDRMRRYNLVPNVFTY 300
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N ++ L + ++ A +L+DEM E+ + D +Y+ + + +L RM +
Sbjct: 301 NCIVKKLCKSEKVDEAYQLLDEMIERGVSPDLWSYNAIQAFHCDHCEVNKALRLISRMEK 360
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWE 439
+P T M++K R D ++WG + +RGF P ++V G C +G+ E
Sbjct: 361 ENCMPDRHTYNMVLKMLLRVGRFDRVTDVWGGMEERGFYPAASTYAVMVHGFCKKKGKLE 420
Query: 440 EA 441
EA
Sbjct: 421 EA 422
>gi|15239161|ref|NP_201383.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170571|sp|Q9FH87.1|PP447_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g65820
gi|9758569|dbj|BAB09050.1| unnamed protein product [Arabidopsis thaliana]
gi|332010728|gb|AED98111.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 140 bits (353), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/452 (24%), Positives = 198/452 (43%), Gaps = 19/452 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+S++E+ RI+ L L + + P L+E VL R A + G + F
Sbjct: 80 ASDVEKSYRILRKFHSRVPKLELALNESGVELRP---GLIERVLNRCGDAGNLGYR---F 133
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F + + P + + + ++ + IL++MR F W L+ +++ +P L+ + +++ R
Sbjct: 134 FVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRF 193
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLL 205
+ ++ +E D M KFG E F LL A C +K+A +F +
Sbjct: 194 ASADMVKKAIEVLDEMP--------KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 245
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
RF N + LL G+ G + + +M GF P +V Y + GY G D
Sbjct: 246 MRFPVNLRYFTSLLYGWCRVGKMMEAKYVLVQMNEAGFEPDIVDYTNLLSGYANAGKMAD 305
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L +M R P+ T LI V + +A ++F EM + + D+ Y A++S
Sbjct: 306 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 365
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ ++ ++D+M +K + +TY + K E +L ++M + ++ P
Sbjct: 366 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 425
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
++++ C V + LW + + G P +++ GL S+G EA +
Sbjct: 426 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 485
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
K+M V R S + Y L+ L ++KLE
Sbjct: 486 KEM-VTRGLFSVSQYGTLKLLLNTVLKDKKLE 516
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 104/255 (40%), Gaps = 41/255 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ VL+QA C M+EA VFV++ R+ + T L+ GF + G + + +M
Sbjct: 325 YTVLIQALCKVDRMEEAMKVFVEM-ERYECEADVVTYTALVSGFCKWGKIDKCYIVLDDM 383
Query: 239 VLRGFRPSVVTY-----------------------------------NIRIDGYCKKGCF 263
+ +G PS +TY N+ I CK G
Sbjct: 384 IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDIGIYNVVIRLACKLGEV 443
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL--KPDIGAYN 321
+A+RL+ EME P + T +I+G + +A F EM R L G
Sbjct: 444 KEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHFKEMVTRGLFSVSQYGTLK 503
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG-VCKLYDRMIE 380
+++++++ + L A ++ + K NV T++ + S G E C MIE
Sbjct: 504 LLLNTVLKDKKLEMAKDVWSCITSKGACELNVLSWTIWIHALFSKGYEKEACSYCIEMIE 563
Query: 381 GKFVPKTRTVVMLMK 395
F+P+ T LMK
Sbjct: 564 MDFMPQPDTFAKLMK 578
>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 559
Score = 140 bits (353), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 161/329 (48%), Gaps = 14/329 (4%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNIL 218
EAFD + GI +N L+ FC +MK+A +F K++ PN T NIL
Sbjct: 230 EAFDLYSEMVSKGISP-DVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNIL 288
Query: 219 LLGF------KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ GF KE+ +V AM M+ +G +P V TYN +D YC A +F
Sbjct: 289 VDGFCKERRLKEAKNVLAM------MMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNT 342
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ + P++ + + +IHG ++ + +A LF EM N+ PD+ YN++I L +
Sbjct: 343 ISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGK 402
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A++L+DEM ++ + HD +TY+++ L K+ ++ L +M + P T
Sbjct: 403 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTT 462
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ C N R++ ++ L+ +G+ + ++ G CS G ++E+ + +M
Sbjct: 463 LVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENG 522
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ +Y ++ L + N+K E L R
Sbjct: 523 CIPNAVTYEIIICSLFDKDENDKAEKLLR 551
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 174/354 (49%), Gaps = 10/354 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + +++ ++A++L S + + P ++T ++ IS F +
Sbjct: 210 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNAL------ISGFCIVGKM 263
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A D + IF I FN+L+ FC ++ +KEA++V ++ + P+ T N
Sbjct: 264 KDATDLFNKMIFENINP-NVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNS 322
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ + +V + ++ + RG P++ +Y+I I G+CK +AM LF+EM
Sbjct: 323 LMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNN 382
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T +LI G + I A +L DEM R + D YN+++ +L + ++ A+
Sbjct: 383 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAI 442
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ +M+++ I D TY T+ GL K+ LE +++ ++ ++ +++ F
Sbjct: 443 ALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGF 502
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C + D L+L + + G P+ ++++ L + ++A + ++M+ R
Sbjct: 503 CSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITR 556
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 125/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++L+ F + + SV K+L + PN T+ L+ G G + F+ ++V
Sbjct: 110 LSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVV 169
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF + V+Y I+G CK G A++L ++ P++ T+I V+ ++
Sbjct: 170 ALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVN 229
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L+ EM + + PD+ YNA+IS + A +L ++M + I + T++ +
Sbjct: 230 EAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILV 289
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K L+ + M++ P T LM +C+ V+ +++ + RG
Sbjct: 290 DGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVN 349
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ H+ +++ G C + +EA K+M
Sbjct: 350 PNIHSYSIMIHGFCKIKKVDEAMNLFKEM 378
>gi|224123678|ref|XP_002319139.1| predicted protein [Populus trichocarpa]
gi|222857515|gb|EEE95062.1| predicted protein [Populus trichocarpa]
Length = 518
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 104/388 (26%), Positives = 181/388 (46%), Gaps = 13/388 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S LV VL R+ ++ A FF + + P + + + + IL +MR FD AW
Sbjct: 53 VSQELVLEVLSRV---RNDWEAAFTFFLWAARQPGYAHSVREYHSMISILGKMRKFDTAW 109
Query: 124 ELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
L+ ++ +T SL+T +++ IM+ + + F +R F G EEF
Sbjct: 110 VLIDEMRGVKTGVSLVTPQTLLIMIRKYCAVHDVGRAINTFYAYKRFKF----DMGIEEF 165
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKE-SGDVTAMEMFYHEMVL 240
LL A C K +++A + + F N K+ NI+L G+ G E + EM
Sbjct: 166 QSLLSALCRYKNVQDAEQLMYCNKAVFPLNTKSFNIVLNGWCNLIGSPRESERVWREMSK 225
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG R VV+Y + Y K G +RL+++M+++ P + +IH R +++
Sbjct: 226 RGIRFDVVSYASMMSCYSKAGSLYRVLRLYKQMKKIGIEPDRKVYNAVIHALAKGRLVNE 285
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L M ++ + P+I YN++I L R R + A D+M ++ I TYH F
Sbjct: 286 AFNLMKTMEEKGVAPNIVTYNSLIKPLCRARKVEEAKGAFDDMLKRCISPTIRTYHA-FL 344
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
++++ E V L ++M + P T +ML++ FC +++ LW + + G P
Sbjct: 345 RILRTG--EEVFALLEKMRKMGCQPINDTYIMLIRKFCRWRQLENVFKLWDEMSENGISP 402
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ +L+ GL G + A + +M
Sbjct: 403 DRSSYIVLIHGLFLNGELDAAHKYYTEM 430
>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
EFFECT EMBRYO ARREST 40; Flags: Precursor
gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 754
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/466 (24%), Positives = 205/466 (43%), Gaps = 39/466 (8%)
Query: 49 PLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEK 108
P T+ P + LSST V+ L + + AL F + P+F+P P +E+
Sbjct: 31 PPSSTISFASPHSAALSSTDVK--LLDSLRSQPDDSAALRLFNLASKKPNFSPEPALYEE 88
Query: 109 TLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE 168
L L R FD +++ ++ + + T + I++ ++F+ +E L D M E
Sbjct: 89 ILLRLGRSGSFDDMKKILEDMKSSRCEMGT-STFLILIESYAQFELQDEILSVVDWMIDE 147
Query: 169 IFV---------------------------------GIRKFGSEEFNVLLQAFCTQKEMK 195
+ GI+ S FNVL++A C +++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVS-TFNVLIKALCRAHQLR 206
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
A + + S P+ KT ++ G+ E GD+ +MV G S V+ N+ +
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 255 DGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
G+CK+G DA+ +EM + P T TL++G ++ A ++ D M +
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
PD+ YN++IS L + ++ A+E++D+M + + VTY+T+ L K + +E +
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L + +P T L++ C+ + + L+ + +G P ++L+ LC
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
S+G+ +EA KQM + S +Y L +AN + E++
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEI 492
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 187/433 (43%), Gaps = 16/433 (3%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S + NV+ F AL F + F P F ++ L + + A E+
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 126 MSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFN 182
M + + P + T S+ +S + K +E +E D+M R+ + +N
Sbjct: 318 MDVMLQEGYDPDVYTYNSV---ISGLCKLGEVKEAVEVLDQMITRDC-----SPNTVTYN 369
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEMVL 240
L+ C + +++EA + L S+ P+ T N L+ G + + AME+F EM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF-EEMRS 428
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G P TYN+ ID C KG +A+ + ++ME C S+ T TLI G +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTRE 488
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A ++FDEM + + YN +I L + R + A +LMD+M + D TY+++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLT 548
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ ++ + M P T L+ C RV++ L + +G
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINL 608
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA-SYRMLQRYLVQANANEKLEDL 479
HA + ++ GL + + EA ++ML + +A SYR++ R L + E +
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIR-EAV 667
Query: 480 DRMIKNLQAVLPP 492
D +++ L+ P
Sbjct: 668 DFLVELLEKGFVP 680
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M +KPD+ +N +I +L R L A+ ++++M + D T+ T+ G ++
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEG 238
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR-GFCPHGHAL 425
L+G ++ ++M+E +V +++ FC RV+ LN + ++ GF P +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMI 483
+ LV GLC G + A E ML +Y + L + E +E LD+MI
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357
>gi|356495741|ref|XP_003516732.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 100/410 (24%), Positives = 189/410 (46%), Gaps = 11/410 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+R+++DH +P L +L P + LS+ LVE VL R + G A FF +
Sbjct: 47 VNEISRLLSDHRYPHHDLELSLN---PFSAQLSTNLVEQVLKR---CKNLGFSAHRFFLW 100
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
P F + +F + IL + F W+ ++ ++ +H + + ++ S+
Sbjct: 101 AKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLTEMRESHHYEINSEIFWLIFRAYSQA 160
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
+ + +F+RM+ G++ + + LL C +K +K+A+ +F + +RF+
Sbjct: 161 NLPDGAIRSFNRMDE---FGVKP-TIHDLDKLLFILCKRKHVKQAQQLFHQAKNRFSLTA 216
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
KT +IL+ G+ E GD + M+ +G ++ YN + CK G +A +F +
Sbjct: 217 KTYSILISGWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHD 276
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P T + IH ++ A ++ D+M + NL P++ YN +I L +
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEH 336
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A +L+DEM + + D +Y+ + + +L RM + +P T M
Sbjct: 337 VEEAYQLLDEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDICLPDRHTYNM 396
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
++K R D +W ++D+ F P +++ G C +G+ EEA
Sbjct: 397 VLKLLIRIGRFDKVTEVWENMVDKKFYPSVSTYSVMIHGFCKKKGKLEEA 446
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 88/222 (39%), Gaps = 2/222 (0%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+R F M+ P++ + L+ +++ QA+QLF + R Y+ +IS
Sbjct: 166 AIRSFNRMDEFGVKPTIHDLDKLLFILCKRKHVKQAQQLFHQAKNR-FSLTAKTYSILIS 224
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
D A +L M E+ D + Y+ + L K ++ ++ M+ + P
Sbjct: 225 GWGEIGDSEKACDLFQAMLEQGCPVDLLAYNNLLQALCKGGRVDEAKNIFHDMLSKRVEP 284
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T + + +C V + + P+ + ++ LC EEA++
Sbjct: 285 DAFTYSIFIHSYCDADDVQSAFRVLDKMRRYNLLPNVFTYNCIIKQLCKNEHVEEAYQLL 344
Query: 446 KQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMIKNL 486
+M+ R + SY +Q Y N L + RM K++
Sbjct: 345 DEMISRGVKPDTWSYNAIQAYHCDHCEVNRALRLMFRMEKDI 386
>gi|356570295|ref|XP_003553325.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Glycine max]
Length = 516
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 109/420 (25%), Positives = 195/420 (46%), Gaps = 13/420 (3%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ LS+ LV VL R ++ A FF + + P + + + + IL +MR FD
Sbjct: 57 SVDLSAKLVVEVLLR---TRNDWEAAFTFFLWAGKQPGYAHSIREYHSMISILGKMRKFD 113
Query: 121 QAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
AW L+ ++R T PSL+T +++ IM+ + + F ++ F + G
Sbjct: 114 TAWNLIEEMRRGRTGPSLVTPQTLLIMIRKYCAVHDVARAINTFYAYKQFNF----QVGL 169
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA-MEMFYHE 237
EEF+ LL A C K +++A + + F + K+ NI+L G+ T+ E +HE
Sbjct: 170 EEFHSLLSALCRYKNVQDAEHLLFCNKNLFPLDTKSFNIILNGWCNLIVSTSHAERIWHE 229
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M R + VV+Y I Y K +R+F+EM++ P + +I+ R
Sbjct: 230 MSKRRIQHDVVSYGSIISCYSKSSKLYKVLRMFDEMKKRKITPDRKVYNAVIYALAKGRL 289
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A L + ++ P++ YN++I L + ++ A +L E+ ++ + T+H
Sbjct: 290 VKEAVNLIGTLEDNDVTPNVVTYNSLIKPLCKAGKVDEAKQLFYEILKRHLSPTIQTFHA 349
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
FF ++++ E V +L D+M E P T +MLM+ FC ++D +W + + G
Sbjct: 350 -FFRILRTK--EEVFELLDKMKELGCYPTIETYIMLMRKFCRWRQLDDVFKMWDAMREDG 406
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
+ +L+ GL G+ EEA +M + + MLQ ++ A E E
Sbjct: 407 IGHDRSSYIVLIHGLFLNGKLEEAHTYYAEMQEKGFLPEPKTEEMLQAWVSGKQATEGQE 466
>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
Length = 568
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 112/431 (25%), Positives = 190/431 (44%), Gaps = 24/431 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P LHP LL LP PL +T N++ R + +ALE
Sbjct: 120 PISTASLHP-LLSALPSAPAFALFADMFRLRLPLCTTTF-NIMLRHLCSAGKPARALELL 177
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ Q P P + + A ++M ++ + ++S
Sbjct: 178 R---QMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWC 232
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K +E ++ FD M + G K + +N L+ +C Q ++ A +++ R A
Sbjct: 233 KVGRVDEAVKVFDEM---LTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVA 289
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
T N+L+ G T EM +G V TYNI I+G+CK+G A+ +
Sbjct: 290 MTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEI 349
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FE M R ++ T T+LI+ + + +LFDE +R ++PD+ YNA+I+S
Sbjct: 350 FENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHST 409
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+++ A E+M EME+KRI D+VTY+T+ GL ++ KL D M + P T
Sbjct: 410 SGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVT 469
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + + V L + ++++GF P + L+ GLC G+ ++A K+M+
Sbjct: 470 YNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMV 529
Query: 450 VRRRQVSEASY 460
+++Y
Sbjct: 530 ENGITPDDSTY 540
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 117/255 (45%), Gaps = 1/255 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A EA + ++ + A + T NIL+ G + G+V + M
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG R +VVTY I KKG + +LF+E R P L LI+ NI
Sbjct: 355 RRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNID 414
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM K+ + PD YN ++ L ++ A +L+DEM ++ I D VTY+T+
Sbjct: 415 RAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLI 474
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ ++ + M+ F P T L++ C N + D N+ +++ G
Sbjct: 475 SGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGIT 534
Query: 420 PHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 535 PDDSTYISLIEGLTT 549
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 143/344 (41%), Gaps = 45/344 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN++L+ C+ K AR++ ++ + R PN T N ++ GF G V A EM
Sbjct: 157 FNIMLRHLCSAG--KPARALELLRQMPR--PNAVTYNTVIAGFCSRGRVQAALDIMREMR 212
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
RG P+ TY I G+CK G +A+++F+EM
Sbjct: 213 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 272
Query: 274 ------------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
ER + ++ T L+H + +A +L +EM + L D+ YN
Sbjct: 273 LDTALLYRDRMVERGVAM-TVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ + ++ A+E+ + M + + VTY ++ + L K ++ KL+D +
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P L+ + +D + G + + P + L+ GLC GR +EA
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451
Query: 442 FECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ +M R Q +Y ++ Y ++ + + L + M+
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMN 495
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 113/243 (46%), Gaps = 6/243 (2%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+A+EL+ + +L + +I+++ K + ++ LE F+ M R G+R
Sbjct: 310 EAYELVEEMGGKGLALDVF-TYNILINGHCKEGNVKKALEIFENMSRR---GVRAT-VVT 364
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A + +++E +F + + R P+ N L+ SG++ EM
Sbjct: 365 YTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEME 424
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VTYN + G C G +A +L +EM + P L T TLI G + ++
Sbjct: 425 KKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVK 484
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ +EM + P + YNA+I L + + A ++ EM E I D+ TY ++
Sbjct: 485 DALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLI 544
Query: 360 FGL 362
GL
Sbjct: 545 EGL 547
>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
Length = 1031
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 105/366 (28%), Positives = 168/366 (45%), Gaps = 16/366 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELM--SHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD++ L I L +M D+A+ ++ + V+ P + S+ +L+R ++ +T
Sbjct: 158 PDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEV----SVYTILTR-----AFCKT 208
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
D +E IF I + +N ++ C + + A ++ R AP+ T NI
Sbjct: 209 GRLKDALE--IFRNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNI 266
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G ++ HEMV RG P VT+N +DG CK G F A L M
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C PS T TLI G +N+ +A+ L DE PD+ Y+ + L + ++ A
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL+ EM K + VTY+T+ GL K+S E +L + ++ FVP T +++
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C R+D L + ++ RG P L+ GLC GR +EA K+M+ +
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506
Query: 458 ASYRML 463
+Y L
Sbjct: 507 LAYVSL 512
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 7/314 (2%)
Query: 169 IFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKES 225
++ G R F F N LQ ++F ++L + +AP++ T ++++ +
Sbjct: 114 VWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQM 173
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
+ + +RGF+P V Y I +CK G DA+ +F + P
Sbjct: 174 NQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS----PDAIAY 229
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+IHG + A + EM +R + PD+ YN +I L + + A E++ EM +
Sbjct: 230 NAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVD 289
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ + D VT++++ GL K+ E L M E P T L+ C VD
Sbjct: 290 RGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDR 349
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+L + GF P +L GLC RGR +EAFE K+M + + +Y L
Sbjct: 350 AKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLID 409
Query: 466 YLVQANANEKLEDL 479
L +A+ EK +L
Sbjct: 410 GLCKASKTEKAYEL 423
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 188/458 (41%), Gaps = 47/458 (10%)
Query: 69 VENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQAWELM 126
V +L R F ALE F+ P+PDA + +H R D A E +
Sbjct: 197 VYTILTRAFCKTGRLKDALEIFRNI-------PSPDAIAYNAIIHGHCRKNDCDGALEFL 249
Query: 127 SHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETL-EAFDR-------MEREIFVGIRKF 176
+ ++ P + T + L + SK E L E DR I G+ K
Sbjct: 250 KEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKA 309
Query: 177 GSEE--------------------FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
G E +N L+ C Q+ + A+ + + +S F P+ T
Sbjct: 310 GKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTY 369
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+IL G + G + EM +G P++VTYN IDG CK A L E +
Sbjct: 370 SILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVS 429
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P + T T ++ G + +A ++ + M KR P + Y A++ L R ++
Sbjct: 430 SGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDE 489
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A + EM K D + Y ++ G KSS + K+ D + + P LM
Sbjct: 490 AHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMD 546
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+C R+D N++ + RG P+ ++++ GLC G+ +EAF + M
Sbjct: 547 GYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVP 606
Query: 456 SEASYRMLQRYLVQANA-NEKLEDLDRMIKNLQAVLPP 492
SY ++ L +A+ E + LD+MI QA +PP
Sbjct: 607 DVVSYNIIIDGLFKASKPKEARQVLDQMI---QAGIPP 641
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/408 (23%), Positives = 176/408 (43%), Gaps = 19/408 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
KA E + +L F P + + L + D+A +++ + + PS++T ++
Sbjct: 419 KAYELLE-SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 477
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
L R + +E F M + + + L+ +C KEA+ V
Sbjct: 478 MEGLCRTGRV---DEAHHIFKEMVSKDCTA----DALAYVSLVNGYCKSSRTKEAQKVVD 530
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R P N L+ G+ + G + + + +M RG P++ TYNI +DG CK G
Sbjct: 531 GI--RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 588
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A E M C+P + + +I G +ARQ+ D+M + + PD YN
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EG 381
+++ + + A+ ++ M + + DNVTY+T+ GL +++ L +L M+ G
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
V T ++ C + L L ++ G + ++ + LC GR +EA
Sbjct: 709 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 768
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
+M R +V SY + L +A E+L+ ++ + + AV
Sbjct: 769 SSLLSEMDTLRDEV---SYTTVIIGLCKA---EQLDRASKLAREMVAV 810
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 135/306 (44%), Gaps = 7/306 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ + KEAR V +++ + P+ T N L+ F + M+
Sbjct: 611 YNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 670
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS-LQTITTLIHGAGLVRNI 298
G P VTYN I G + GDA L EM R C+ S T T+I +
Sbjct: 671 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 730
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA L D M ++ + YN I L + L+ A L+ EM+ R D V+Y T+
Sbjct: 731 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTV 787
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
GL K+ L+ KL M+ K + T +L+ F R+D L L G ++ RG
Sbjct: 788 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRG 847
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKL 476
P ++++T LC + ++A+E +M VR S SY +L L Q E L
Sbjct: 848 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 907
Query: 477 EDLDRM 482
+ L+ M
Sbjct: 908 QVLEEM 913
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 73/335 (21%), Positives = 125/335 (37%), Gaps = 81/335 (24%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + L + D+A+ + H P ++ S +I++ + K +E
Sbjct: 571 PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVV---SYNIIIDGLFKASKPKEA 627
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
+ D+M I GI + +N L+ FC ++ +A + ++ + P+N T N
Sbjct: 628 RQVLDQM---IQAGIPP-DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNT 683
Query: 218 LLLGFKES----------------GDVTAMEMFYHEMVLR-------------------- 241
L+ G ++ G V + Y+ ++ R
Sbjct: 684 LISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGH 743
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---------------------------- 273
G + VTYNI ID CK+G +A L EM
Sbjct: 744 GVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 803
Query: 274 --ERVA----CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
E VA C+ S T LI + + +A L M +R P + YN +I+ L
Sbjct: 804 AREMVAVKGLCITS-HTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCL 862
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ ++ A EL DEM + I +V+Y + +GL
Sbjct: 863 CKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGL 897
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Query: 157 ETLEAFDRMEREIFVGIRKF--GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
E L+ ++ RE+ V ++ S FN+L+ AF K + EA ++ ++ R +P+
Sbjct: 795 EQLDRASKLAREM-VAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVI 853
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N+++ + V + EM +RG S V+Y + I G C +G +A+++ EEM
Sbjct: 854 TYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEM 913
Query: 274 ERVAC 278
C
Sbjct: 914 ASSDC 918
>gi|224085950|ref|XP_002307751.1| predicted protein [Populus trichocarpa]
gi|222857200|gb|EEE94747.1| predicted protein [Populus trichocarpa]
Length = 480
Score = 139 bits (351), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 101/428 (23%), Positives = 201/428 (46%), Gaps = 10/428 (2%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNGL---KALEFFKFTLQHPHFTPTPDAFEKTLHI 112
Q + +S ++V +V+ + A +G+ + L FF + F +P+A+ + +
Sbjct: 45 QIISTVRSISPSIVRHVIAQSSAVR-HGIPVPQVLAFFNWASNQDGFRKSPEAYNEMVDF 103
Query: 113 LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG 172
++ FD AW + + + +T+++ I++ R + E + AF+RME
Sbjct: 104 SGQVMMFDVAWYFID-LMKARNVDVTVETFLILMRRYVRAGLAAEAIHAFNRMEDYNC-- 160
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAME 232
K F++L+ C ++ +A+ F L +F P+ L+ G+ +G+++ E
Sbjct: 161 --KPDKIAFSILISILCRERRASQAQEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAE 218
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ EM + G +P+V TY+I ID C+ G A +F EM C P+ T +L+
Sbjct: 219 RVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIH 278
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ Q++++M + +PD YN +I + + +L A++++ M +K +
Sbjct: 279 VKAGRTEKVLQVYNQMKRLGCEPDTVTYNFLIETHCKDENLEDAIKVIGLMAKKGCAPNA 338
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
T++T+F + K + ++Y +M E T T LMK F + D+ L L
Sbjct: 339 STFNTLFGCIAKLGDVNAAHRMYKKMKELNCEANTVTYNTLMKMFVASKSTDMVLKLKTE 398
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR-RQVSEASYRMLQRYLVQAN 471
+ + P+ + +L+T C G W A++ ++M+ + + S Y M+ + L +A
Sbjct: 399 MDENKIEPNVNTYKVLITMYCGMGHWNNAYKFFREMIDEKCLRPSLPVYDMVLQQLRKAG 458
Query: 472 ANEKLEDL 479
+K E+L
Sbjct: 459 QLKKHEEL 466
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 93/248 (37%), Gaps = 42/248 (16%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNI 298
GFR S YN +D + F A + M+ +++T L+ AGL
Sbjct: 89 GFRKSPEAYNEMVDFSGQVMMFDVAWYFIDLMKARNVDVTVETFLILMRRYVRAGLAA-- 146
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A F+ M N KPD A++ +IS L R R + A E D +++K
Sbjct: 147 -EAIHAFNRMEDYNCKPDKIAFSILISILCRERRASQAQEFFDSLKDK------------ 193
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
F P L++ +C + ++G + G
Sbjct: 194 ------------------------FEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGI 229
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ + +++ LC G+ A + +ML Q + +Y L R V+A EK+
Sbjct: 230 KPNVYTYSIVIDSLCRCGQITRAHDIFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQ 289
Query: 479 LDRMIKNL 486
+ +K L
Sbjct: 290 VYNQMKRL 297
>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Cucumis sativus]
Length = 749
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 164/353 (46%), Gaps = 39/353 (11%)
Query: 177 GSEEFNVLLQAFC-TQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMF 234
G +N +L A T++ +K A +F +++ S +PN T NIL+ GF +G++ F
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFF 225
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF------------------------ 270
+ EM G P+VVTYN ID YCK G+A +L
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 271 -----------EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
EEM + +P T TLI+G V N HQA L EM K L P++
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I+S+ + +LN AME +D+M ++ + + TY T+ G + L+ ++ M+
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E F P T L+ C+ R++ L +I+RGF P + +++G C E
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+AF+ +M+ + A+Y L + L + ++ DL + + +L LPP
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLG--LPP 516
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 180/396 (45%), Gaps = 11/396 (2%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--H 128
N+L R F N L FF ++ P + + ++R +A++L+
Sbjct: 207 NILIRGFCTAGNLEMGLFFFG-EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
++ +P+L+ S +++++ + + +ET E + M + +V R FN L+ +
Sbjct: 266 LKGLNPNLI---SYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV----TFNTLINGY 318
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C +A + +++ +PN T L+ ++G++ F +M RG P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TY IDG+ ++G A ++ +EM P++ T LI+G ++ + A L E
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R PD+ +Y+ +IS R ++L A +L EM K I D TY ++ GL K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L VC L+ M+ P T L+ +C+ +D L L +I +GF P ++
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L+ G + R +EA ++L +E +Y L
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 155/396 (39%), Gaps = 64/396 (16%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ TL HFTP + ++L + + FD + L + + + L ++
Sbjct: 37 QLTLLSSHFTPQASS-----NLLLKSQ-FDSSLVLKFLDWARSQQFFSFQCKCLALHILT 90
Query: 151 KFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
+++ Y+ + E+ V + + G + F L ++ K + VK +R
Sbjct: 91 RYKLYKTA----QSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVN 146
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV--------------------- 248
NK ++I+ L GF P V+
Sbjct: 147 LINKALSIVNLAKS-----------------YGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 249 ---------------TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
TYNI I G+C G + F EMER CLP++ T T+I
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+R I +A +L M + L P++ +YN +I+ L R + E+++EM ++R D V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T++T+ G L+ M++ P T L+ C ++ + +
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
DRG P+G L+ G +G ++A++ K+M+
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 174/432 (40%), Gaps = 70/432 (16%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
+ P F ++ + F QA L + + + P+++T ++ ++ + K +
Sbjct: 304 YVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTL---INSMCKAGNLN 360
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+E D+M G+ G + L+ F Q +K+A + +++ F P T
Sbjct: 361 RAMEFLDQMRDR---GLHPNG-RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITY 416
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G G + EM+ RGF P VV+Y+ I G+C+ A +L EM
Sbjct: 417 NALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVA 476
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T ++LI G R + + LF EM L PD Y ++I++ DL+
Sbjct: 477 KGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDK 536
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT-------- 387
A+ L DEM +K D VTY+ + G K S + +L +++ + VP
Sbjct: 537 ALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLID 596
Query: 388 -------RTVVMLMKFFCVNF-----------------------------------RVDL 405
++ + LMK FC+ ++
Sbjct: 597 NCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEK 656
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML---VRRRQVSEASYRM 462
NL+ ++ GF PH + L L G+ E Q+L ++ +++EA+
Sbjct: 657 AYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVEL----NQLLDYTLKSCRITEAA--- 709
Query: 463 LQRYLVQANANE 474
L + L+ N+ E
Sbjct: 710 LAKVLIGINSKE 721
>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Cucumis sativus]
Length = 749
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 150/324 (46%), Gaps = 37/324 (11%)
Query: 177 GSEEFNVLLQAFC-TQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMF 234
G +N +L A T++ +K A +F +++ S +PN T NIL+ GF +G++ F
Sbjct: 166 GVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXF 225
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF------------------------ 270
+ EM G P+VVTYN ID YCK G+A +L
Sbjct: 226 FGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCR 285
Query: 271 -----------EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
EEM + +P T TLI+G V N HQA L EM K L P++
Sbjct: 286 EGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVT 345
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I+S+ + +LN AME +D+M ++ + + TY T+ G + L+ ++ M+
Sbjct: 346 YTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E F P T L+ C+ R++ L +I+RGF P + +++G C E
Sbjct: 406 ENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELE 465
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
+AF+ +M+ + A+Y L
Sbjct: 466 KAFQLKVEMVAKGISPDVATYSSL 489
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 99/396 (25%), Positives = 180/396 (45%), Gaps = 11/396 (2%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--H 128
N+L R F N L FF ++ P + + ++R +A++L+
Sbjct: 207 NILIRGFCTAGNLEMGLXFFG-EMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMA 265
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
++ +P+L+ S +++++ + + +ET E + M + +V R FN L+ +
Sbjct: 266 LKGLNPNLI---SYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV----TFNTLINGY 318
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C +A + +++ +PN T L+ ++G++ F +M RG P+
Sbjct: 319 CNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNG 378
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TY IDG+ ++G A ++ +EM P++ T LI+G ++ + A L E
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R PD+ +Y+ +IS R ++L A +L EM K I D TY ++ GL K
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L VC L+ M+ P T L+ +C+ +D L L +I +GF P ++
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L+ G + R +EA ++L +E +Y L
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTL 594
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/396 (21%), Positives = 155/396 (39%), Gaps = 64/396 (16%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ TL HFTP + ++L + + FD + L + + + L ++
Sbjct: 37 QLTLLSSHFTPQASS-----NLLLKSQ-FDSSLVLKFLDWARSQQFFSFQCKCLALHILT 90
Query: 151 KFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
+++ Y+ + E+ V + + G + F L ++ K + VK +R
Sbjct: 91 RYKLYKTA----QSLAEEVVVNTVDETGEDLFQCLKNSYYQCKSSSAVFDLVVKSCARVN 146
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV--------------------- 248
NK ++I+ L GF P V+
Sbjct: 147 LINKALSIVNLAKS-----------------YGFMPGVLSYNAILDAVIRTKQSVKIAEG 189
Query: 249 ---------------TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
TYNI I G+C G + F EMER CLP++ T T+I
Sbjct: 190 IFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDAYC 249
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+R I +A +L M + L P++ +YN +I+ L R + E+++EM ++R D V
Sbjct: 250 KLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRV 309
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T++T+ G L+ M++ P T L+ C ++ + +
Sbjct: 310 TFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQM 369
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
DRG P+G L+ G +G ++A++ K+M+
Sbjct: 370 RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMV 405
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 105/234 (44%), Gaps = 22/234 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ FC +E+++A + V+++++ +P+ T + L+ G + + + + EM+
Sbjct: 451 YSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEML 510
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VTY I+ YC +G A+RL +EM + P + T LI+G
Sbjct: 511 SLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTK 570
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL------------------NAAMELMD 341
+A++L ++ P+ YN +I + C +L N A +++
Sbjct: 571 EAKRLLLKLLYEESVPNEITYNTLIDN---CNNLEFKSALALMKGFCMKGLMNEADRVLE 627
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
M +K + Y+ + G K +E LY M+ F P + T++ L K
Sbjct: 628 SMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAK 681
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 115/315 (36%), Gaps = 70/315 (22%)
Query: 74 GRLFAAHSNGLKALEFFKFTLQ------HPHFTPTPDAFEKTLH---ILARMRYFDQAWE 124
GR + +G F K Q FTPT + ++ IL RM D +
Sbjct: 378 GRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRME--DASGL 435
Query: 125 LMSHVQRTH-PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L ++R P +++ ++ IS F +E +AF + GI ++
Sbjct: 436 LQEMIERGFIPDVVSYSTI------ISGFCRNQELEKAFQLKVEMVAKGISP-DVATYSS 488
Query: 184 LLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+Q C Q+ + E +F ++LS P+ T L+ + GD+ + EM+ +G
Sbjct: 489 LIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKG 548
Query: 243 FRPSVVTYNIRIDGY--------------------------------------------- 257
F P +VTYN+ I+G+
Sbjct: 549 FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALA 608
Query: 258 -----CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
C KG +A R+ E M + + + +IHG V NI +A L+ EM
Sbjct: 609 LMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSG 668
Query: 313 LKPDIGAYNAMISSL 327
P A+ SL
Sbjct: 669 FAPHSVTIMALAKSL 683
>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Vitis vinifera]
Length = 762
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 184/398 (46%), Gaps = 15/398 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L R F + K L F ++ P + + +M D+A+ L+ +
Sbjct: 218 NILIRGFCSVGELQKGLGCFG-EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 276
Query: 131 RT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQ 186
P+L+ S +++++ + + S +E E + M G + F +E +N LL
Sbjct: 277 SKGMQPNLI---SYNVIINGLCREGSMKEAWEILEEM------GYKGFTPDEVTYNTLLN 327
Query: 187 AFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+C + +A + +++ + +P+ T L+ ++ ++ F+ +M +RG RP
Sbjct: 328 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 387
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ TY IDG+ ++G +A R+ EM PS+ T IHG ++ + +A +
Sbjct: 388 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 447
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
EM ++ L PD+ +Y+ +IS R +L+ A ++ EM EK + D VTY ++ GL +
Sbjct: 448 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 507
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L C L M++ P T L+ +CV ++ L+L +I +GF P
Sbjct: 508 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 567
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+L+ GL + R EA +++ S+ +Y L
Sbjct: 568 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 605
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 111/462 (24%), Positives = 195/462 (42%), Gaps = 65/462 (14%)
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS------------------- 127
L+F + HP F +LHIL R + + A L
Sbjct: 75 LKFLTWARNHPFFDSHCKCL--SLHILTRFKLYKTAQTLAQELALSASDPSGSSIFQCLK 132
Query: 128 ---HVQRTHPSL--LTLKSMS-----------IMLSRISKFQ----SYEETLEAFDRMER 167
HV + ++ L +KS S I L++ S F SY L+A R
Sbjct: 133 DSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSR- 191
Query: 168 EIFVGIRKFGSEE----------------FNVLLQAFCTQKEMKEARSVFVKLLSRFA-P 210
G K +EE +N+L++ FC+ E+++ F ++ P
Sbjct: 192 ----GSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLP 247
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T N L+ + + G + M +G +P++++YN+ I+G C++G +A +
Sbjct: 248 NVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEIL 307
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EEM P T TL++G N HQA + EM + + P + Y A+I+S+ +
Sbjct: 308 EEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKA 367
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
R+LN AME D+M + + + TY T+ G + L ++ + M E F P T
Sbjct: 368 RNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+ CV R++ L + ++++G P + +++G C +G + AF+ ++M+
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+ +Y L + L + + DL + + L LPP
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEM--LDMGLPP 527
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 163/369 (44%), Gaps = 25/369 (6%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
FTP + L+ + F QA + + + R PS++T ++ ++ + K ++
Sbjct: 315 FTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTAL---INSMCKARNLN 371
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+E FD+M G+R + L+ F Q + EA + ++ S F+P+ T
Sbjct: 372 RAMEFFDQMR---IRGLRP-NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N + G + EMV +G P VV+Y+ I G+C+KG A ++ +EM
Sbjct: 428 NAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVE 487
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P T ++LI G +R + +A L EM L PD Y +I++ DLN
Sbjct: 488 KGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNK 547
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL---------------YDRMIE 380
A+ L DEM K D VTY + GL K + +L YD +IE
Sbjct: 548 ALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIE 607
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ ++VV L+K FC+ + ++ +++R P ++++ G C G +
Sbjct: 608 NCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPK 667
Query: 441 AFECSKQML 449
AF K+M+
Sbjct: 668 AFNLYKEMI 676
>gi|449431996|ref|XP_004133786.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
gi|449477985|ref|XP_004155184.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Cucumis sativus]
Length = 485
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 102/380 (26%), Positives = 175/380 (46%), Gaps = 12/380 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S LV VL R+ ++ A FF + + P + + + + IL +MR FD AW
Sbjct: 41 VSGELVVAVLSRI---RNDWEAAFTFFVWAGKQPGYAHSVREYHSMISILGKMRKFDTAW 97
Query: 124 ELMSHVQRTHP--SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
L+ ++ P SL+T +++ IM+ R + + F +R F G EEF
Sbjct: 98 ALIDEMRGGTPGSSLVTPQTLLIMIRRYCAVHDVAKAINTFYAHKRFGF----NIGLEEF 153
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
LL A C K +K+A + F N K+ NI+L G+ G + E + EM R
Sbjct: 154 QSLLSALCRYKNVKDAEYLLFCNKDVFPFNTKSFNIILNGWCVIGSLRDTERVWKEMTRR 213
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G V+Y I Y K +RLFE+M+R+ P + +IH R + +A
Sbjct: 214 GISHDAVSYASCISCYSKVRNLHKVLRLFEDMKRMKIDPDRKVYNAVIHSLAKGRCLKEA 273
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L M ++ + ++ YN++I L + R + A + +E+ ++ + TYH F
Sbjct: 274 ADLIKTMEEKGIIANVVTYNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHA-FLR 332
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+++ E + +L +M P T T +ML++ FC ++D +W + + G P
Sbjct: 333 FLRTE--EEIFELLKKMRTMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPD 390
Query: 422 GHALDLLVTGLCSRGRWEEA 441
+ +L+ GL G+ E+A
Sbjct: 391 RSSYIVLIHGLFLNGKLEDA 410
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 4/137 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + EAR+VF +LL R P +T + L + ++ + +M
Sbjct: 292 YNSVIKPLCKARRFDEARAVFEELLQRGLCPTIQTYHAFLRFLRTEEEIFEL---LKKMR 348
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ TY + I +C+ + R++ EM P + LIHG L +
Sbjct: 349 TMGCNPTTDTYIMLIRKFCRWRQLDNVSRIWHEMSENGISPDRSSYIVLIHGLFLNGKLE 408
Query: 300 QARQLFDEMPKRNLKPD 316
A + + EM +++L P+
Sbjct: 409 DAHKYYLEMKEKDLLPE 425
>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
Length = 636
Score = 138 bits (347), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 145/295 (49%), Gaps = 5/295 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ C + EA + F K+ + PN T N+L+ GF + V + EM
Sbjct: 10 WTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMK 69
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
G P+VVTY+ I G+C++ A +LF +M C+P+L T TL+ +GL RN
Sbjct: 70 ESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLL--SGLCRNGL 127
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A +L DEM +R L+PD +Y+ +++ L + ++ A+++ ++ D V Y T
Sbjct: 128 MDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYST 187
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ L+ CKL+++M E P T LM C R+ + + DR
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
P+ L+ GLC G+ +A E K+M+VR + + +Y L N
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 113/455 (24%), Positives = 196/455 (43%), Gaps = 41/455 (9%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD+ + TL+ L +T + L ++F +SNG P A
Sbjct: 145 PDKFSYDTLMAGLCKTGKIDMAL------KVFEDNSNG--------------DCPPDVVA 184
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L + D+A +L ++ P ++T ++ L + + Q ++ LE +
Sbjct: 185 YSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETME 244
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+R + + S L+ C ++++A+ VF +++ R PN T N L+ GF
Sbjct: 245 --DRNCTPNVITYSS-----LIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGF 297
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ V + + EM G P ++TYN IDG CK G +A RLF +M+ C P +
Sbjct: 298 CMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDV 357
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T + LI G + I AR LFD+M K+ + PD+ ++ ++ ++ A L++E
Sbjct: 358 ITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEE 417
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M D TY ++ G K + ++ RM + P T L+ FC +
Sbjct: 418 MVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGK 477
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR--RRQVSEA-- 458
+ L ++ G P+ L+ G C G EEA ++ML R R + +A
Sbjct: 478 PTVAYKLLEEMVGNGVQPNVITYRSLIGGFCGTGDLEEA----RKMLERLERDENCKADM 533
Query: 459 -SYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+YR++ L + +L IK Q+ PP
Sbjct: 534 FAYRVMMDGLCRTGRMSAALELLEAIK--QSGTPP 566
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 126/262 (48%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ FC Q ++ A +F +++ PN T N LL G +G + EM
Sbjct: 80 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 139
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P +Y+ + G CK G A+++FE+ C P + +TLI G +
Sbjct: 140 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLD 199
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF++M + + +PD+ + A++ L + L A ++++ ME++ + +TY ++
Sbjct: 200 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 259
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ + +++ RMI P T L+ FC+ VD L L + G
Sbjct: 260 DGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCL 319
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P + L+ GLC GR EA
Sbjct: 320 PDIITYNTLIDGLCKTGRAPEA 341
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 156/352 (44%), Gaps = 12/352 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISK 151
++ P + +H R D A++L + P+L+T ++ LS + +
Sbjct: 68 MKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTL---LSGLCR 124
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+E E D M RE + KF ++ L+ C ++ A VF + P
Sbjct: 125 NGLMDEAYELLDEM-RERGLQPDKF---SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPP 180
Query: 212 NKTM-NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + L+ G ++G + + +M P VVT+ +DG CK +A ++
Sbjct: 181 DVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVL 240
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E ME C P++ T ++LI G + A+++F M R ++P++ YN++I
Sbjct: 241 ETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMT 300
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRT 389
+++A+ LM+EM D +TY+T+ GL K+ +L+ M + KF P T
Sbjct: 301 NGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDM-KAKFCNPDVIT 359
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ FC R+D+ L+ ++ + P LV G C+ G ++A
Sbjct: 360 YSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDA 411
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 140/309 (45%), Gaps = 4/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C EA +F + ++F P+ T + L+ GF + + + +M+
Sbjct: 325 YNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDML 384
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VVT++ ++GYC G DA RL EEM C P + T T+L+ G V +
Sbjct: 385 KQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMV 444
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR++ M KR +P++ Y A+I + R A +L++EM + + +TY ++
Sbjct: 445 EARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLI 504
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + LE K+ +R+ + ++M C R+ L L + G
Sbjct: 505 GGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGT 564
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA-SYRMLQRYLVQANANEKLE 477
P L+ GLC +A E ++M + R+ A +Y + + L + +E+
Sbjct: 565 PPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEAN 624
Query: 478 DL-DRMIKN 485
L D ++ N
Sbjct: 625 ALADELLGN 633
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 99/203 (48%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+V+T+ I IDG CK +A F +M++ +P+ T LI+G V +H+A L
Sbjct: 6 NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
EM + L P++ Y+ +I R ++ A +L +M E + VTY+T+ GL ++
Sbjct: 66 KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ +L D M E P + LM C ++D+ L ++ + P A
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185
Query: 426 DLLVTGLCSRGRWEEAFECSKQM 448
L+ GLC GR +EA + ++M
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKM 208
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 79/166 (47%)
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C ++ T T +I G + +A F +M K+ P+ YN +I+ + ++ A
Sbjct: 3 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ EM+E + + VTY T+ G + + ++ KL+ +M+E +P T L+
Sbjct: 63 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C N +D L + +RG P + D L+ GLC G+ + A +
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALK 168
>gi|449437410|ref|XP_004136485.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
gi|449519964|ref|XP_004167004.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Cucumis sativus]
Length = 534
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 189/407 (46%), Gaps = 15/407 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L AL FF + F +P + + + + +++ F AW L+ + + +T+ + S
Sbjct: 129 LPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAWYLID-LMKARNVEITVVTFS 187
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARS 199
+++ R + E + AF+RME +G F+ ++ C ++ EA+S
Sbjct: 188 MLVRRYVRAGLAAEAVHAFNRME--------DYGCNADIIAFSNVISILCKKRRAVEAQS 239
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F L +F P+ L+ G+ +GD++ E + EM + G P+V TY+I ID C+
Sbjct: 240 FFDNLKHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNVYTYSIVIDALCR 299
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A +F EM C P+ T LI + Q++++M + D+
Sbjct: 300 SGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQMKRLRCAADLIT 359
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I + + +L A+++++ M + + +++ +F + KS + G +++ RM
Sbjct: 360 YNFLIETHCKDDNLGEAIKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMFARMK 419
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P T T +LM+ F V D+ L + + P+ + L+ C G W
Sbjct: 420 EVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGMGHWN 479
Query: 440 EAFECSKQMLVRR-RQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
A+ ++M+ + + S Y+M+ L +A +K E+L D+M++
Sbjct: 480 HAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVE 526
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 10/179 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGFKESGDVTAMEMFY 235
+N L++ C + EA +K+L+ A PN + N + +S DV +
Sbjct: 360 YNFLIETHCKDDNLGEA----IKVLNSMAKNDCTPNASSFNPIFRCIAKSQDVNGAHRMF 415
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M G +P+ VTYNI + + +L +EM+ P+ T LI +
Sbjct: 416 ARMKEVGCKPNTVTYNILMRMFAVPKSADMIFKLKKEMDEEEVEPNFNTYRELIALYCGM 475
Query: 296 RNIHQARQLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + A F EM ++ +KP + Y ++ L + L EL+D+M E+ N+
Sbjct: 476 GHWNHAYMFFREMIDEKCIKPSMPLYKMVLEELRKAGQLKKHEELVDKMVERGFASRNL 534
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 50/245 (20%), Positives = 96/245 (39%), Gaps = 3/245 (1%)
Query: 245 PSVVTYNIRIDGYCKKGC-FGDAMRLFEEMERVACLP-SLQTITTLIHGAGLVRNIHQAR 302
P+VV Y I G + G F A+ F S Q +I AG V+ A
Sbjct: 109 PAVVRYVIEKSGAVRHGIPFLPALAFFNWATAGEGFEHSPQPYNEMIDLAGKVKQFGLAW 168
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L D M RN++ + ++ ++ +R A+ + ME+ D + + + L
Sbjct: 169 YLIDLMKARNVEITVVTFSMLVRRYVRAGLAAEAVHAFNRMEDYGCNADIIAFSNVISIL 228
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K +D + + KF P L+ +C + +++ + G P+
Sbjct: 229 CKKRRAVEAQSFFDNL-KHKFEPDVIVYTSLVHGWCRAGDISEAESVFREMKMAGISPNV 287
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
+ +++ LC G+ A + +ML + ++ L R ++A EK+ +
Sbjct: 288 YTYSIVIDALCRSGQITRAHDVFAEMLDAGCNPNSVTFNNLIRVHLRAGRTEKVLQVYNQ 347
Query: 483 IKNLQ 487
+K L+
Sbjct: 348 MKRLR 352
>gi|308082018|ref|NP_001183846.1| uncharacterized protein LOC100502439 [Zea mays]
gi|238014984|gb|ACR38527.1| unknown [Zea mays]
gi|414872746|tpg|DAA51303.1| TPA: hypothetical protein ZEAMMB73_971718 [Zea mays]
Length = 623
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 179/400 (44%), Gaps = 8/400 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S+ LV VL R ++ + A FF + + D+++ + IL + + FD
Sbjct: 161 VSARLVSKVLSRF---SNDWVAAFGFFMWAGTQEGYCHCADSYDMMVDILGKFKQFDLMC 217
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L+ + L++L +M+ ++ R+ + + ++AF +M+R G+ K ++ NV
Sbjct: 218 GLIGQMHEI-GGLVSLATMTKVMRRLCGANRWSDAIDAFHKMDR---FGVAK-DTKAMNV 272
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C ++ +K AR F L P+ + N L+ G+ ++ + EM GF
Sbjct: 273 LLDTLCKERSVKRARGAFQALKGTIPPDESSFNTLVHGWCKARMLKEARETMKEMERHGF 332
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
PSV TY I+ YC + F + +EM C P++ T T ++H G +A
Sbjct: 333 SPSVTTYTCLIEAYCMEKDFQTVDGILDEMHTKGCTPNIITYTIVMHALGKAGRTQEALD 392
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
FD++ + D YN +I L R L A +++EM I + T++T+
Sbjct: 393 TFDKVKQDGCALDASFYNCLIYILCRAGRLQDANFVVEEMHRTGISPNLTTFNTLISAAC 452
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E KL +M E P +T L+K C V L L ++ + P
Sbjct: 453 DHSLAENALKLLVQMEEQSCNPDIKTYTPLLKLCCRRKWVKTLLFLICHMFRKDITPDFS 512
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
LLV LC GR ++ ++M+++ +A++ ++
Sbjct: 513 TYTLLVCWLCRNGRLTQSCLFLEEMVLKGFTPQQATFDLV 552
>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
Length = 688
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 197/437 (45%), Gaps = 22/437 (5%)
Query: 45 FPDQPLHPTLL----QHLPQTTPLSSTLVENVLGRLFAAHSNGLKA----LEFFKFTLQH 96
FP P P+ L H+ +T + + G + SN + F++ +
Sbjct: 29 FPFLPYFPSFLFFHRHHITTSTFTKNPSLPKKNGGFASNSSNTISVDDALASFYRMARMN 88
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ---RTHPSLLTLKSMSIMLSRISKFQ 153
P P+ F K L +A+M+ + L + + TH T+ S++I+++ + +
Sbjct: 89 PR--PSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTH----TVYSLNILINCLCRLN 142
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNN 212
+ + + +M + +GI+ F L+ C + ++K A ++ +++ S P+
Sbjct: 143 HVDFAVSVWGKMFK---LGIQP-DVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDV 198
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ N L+ G SG+ + +M G +P+VVTYN ID CK DAM E
Sbjct: 199 ISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSE 258
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P T +++HG + +++A +LF M + KPD+ YN +I SL + R
Sbjct: 259 MVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRL 318
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+N A + + EM ++ I D VTY T+ GL L +L+ +M + P
Sbjct: 319 VNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNT 378
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++ C + V+ + ++DRG P+ ++ G C+ G+ +EA + K+M+ R
Sbjct: 379 IIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRN 438
Query: 453 RQVSEASYRMLQRYLVQ 469
+ ++ +L L Q
Sbjct: 439 VMPNTLTFSILVDGLCQ 455
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/284 (27%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C + + +A +++ R P+ T N ++ G G + + M
Sbjct: 236 YNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRME 295
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P VVTYNI ID K DA EM P + T TT++HG + ++
Sbjct: 296 QNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLN 355
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF +M ++ KPD+ AYN +I SL + R +N AME + EM ++ I + VTY T+
Sbjct: 356 EAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTIL 415
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G L+ +L+ M+ +P T T +L+ C V ++ + ++G
Sbjct: 416 HGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVE 475
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ + + L+ G C R + EA + + M+ + SY +L
Sbjct: 476 PNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNIL 519
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 172/381 (45%), Gaps = 47/381 (12%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD + I L + R + A + +S + Q P ++T ++ L + E
Sbjct: 301 PDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTI---LHGLCYLGQLNEA 357
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ F +ME++ G + +N ++ + C + + +A +++ R PN T +
Sbjct: 358 IRLFKKMEQK---GCKP-DVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYST 413
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+L GF G + + EMV R P+ +T++I +DG C++G +A +FE M
Sbjct: 414 ILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKG 473
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ T L++G L +++AR++F+ M + PD+ +YN +I+ R ++ A
Sbjct: 474 VEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAK 533
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGL---------------MKSSG-----------LEGV 371
L+ +M K++ + VTY+T+ GL M SSG L G+
Sbjct: 534 ALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGL 593
Query: 372 C---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
C KL+ M E K P +L++ + ++++ L+ L G P G
Sbjct: 594 CKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPG 653
Query: 423 HALDLLVTGLCSRGRWEEAFE 443
++++ GL G +EA+E
Sbjct: 654 RTYNVMIKGLLKEGLSDEAYE 674
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 134/288 (46%), Gaps = 1/288 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C ++ EA +F ++ + P+ T NI++ + V F EMV
Sbjct: 271 YNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMV 330
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P VVTY + G C G +A+RLF++ME+ C P + T+I R ++
Sbjct: 331 DQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVN 390
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + EM R + P+ Y+ ++ L+ A +L EM + + + +T+ +
Sbjct: 391 DAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILV 450
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + + +++ M E P T LM +C+ +++ ++ ++ +G
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCA 510
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
P H+ ++L+ G C+ R ++A QM V++ + +Y + + L
Sbjct: 511 PDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGL 558
>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 694
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 153/335 (45%), Gaps = 36/335 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K + EA + ++ SR P+ T + L+ GF +G + +EM
Sbjct: 275 YNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMT 334
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P V TY I ID CK+G +A L M + P++ T +TL+ G LV +H
Sbjct: 335 LKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVH 394
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+Q+F M + + P + +YN MI+ L + + ++ AM L+ EM K + + VTY+++
Sbjct: 395 NAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLI 454
Query: 360 FGLMKS--------------------------SGLEGVCK---------LYDRMIEGKFV 384
GL KS S L+G+CK L+ +M E
Sbjct: 455 DGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQ 514
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ C R+ L+ +++ +G C + ++++ GLC G +EA
Sbjct: 515 PNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAM 574
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+M ++ ++ R L + + N+K E L
Sbjct: 575 KSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKL 609
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 95/387 (24%), Positives = 169/387 (43%), Gaps = 16/387 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TP+ F K L L +M++F A L V+ P L+TL + I+ F +
Sbjct: 129 TPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL------INCFCHLGQ 182
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+F + + + +G + + L++ C + E+K++ K++++ F N +
Sbjct: 183 MAFSFSVLGKILKLGYQP-NTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYG 241
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G + G+ + R RP VV YN IDG CK +A + EM
Sbjct: 242 TLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSR 301
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T +TLI G L + A L +EM +N+ PD+ Y +I +L + L A
Sbjct: 302 GIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEA 361
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L+ M ++ + + VTY T+ G + +++ M++ + P + +++
Sbjct: 362 KNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMING 421
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C VD +NL ++ + P+ + L+ GLC GR A + K++ R +
Sbjct: 422 LCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPAD 481
Query: 457 EASYRMLQRYLVQANANEKLEDLDRMI 483
+Y L L K ++LD+ I
Sbjct: 482 VITYTSLLDGLC------KNQNLDKAI 502
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 1/201 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+++ C K + EA ++ ++L + PN T N L+ G +SG +T+ E+
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG V+TY +DG CK A+ LF +M+ P+ T T LI G +
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A++LF + + D+ YN MI L + L+ A+ + +ME+ D VT+ +
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEII 593
Query: 359 FFGLMKSSGLEGVCKLYDRMI 379
L + + KL MI
Sbjct: 594 IRSLFEKDENDKAEKLLHEMI 614
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S +IM++ + K +S +E + M + V + +N L+ C + A +
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVP----NTVTYNSLIDGLCKSGRITSALDL 469
Query: 201 FVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+L R P + T LL G ++ ++ + +M RG +P+ TY IDG CK
Sbjct: 470 MKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCK 529
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+A +LF+ + C + T +I G + +A + +M PD
Sbjct: 530 GARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVT 589
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ +I SL + + A +L+ EM K + H
Sbjct: 590 FEIIIRSLFEKDENDKAEKLLHEMIAKGLLH 620
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 46/242 (19%), Positives = 93/242 (38%), Gaps = 35/242 (14%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI--------- 285
++ M+L PS++ + + K F A+ L ++ME P L T+
Sbjct: 120 FNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCH 179
Query: 286 --------------------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
TTL+ G L + ++ D++ + + + +
Sbjct: 180 LGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVS 239
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +++ L + + A++L+ +E++ D V Y+T+ GL K + Y M
Sbjct: 240 YGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMN 299
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P T L+ FC+ ++ +L + + P + +L+ LC G+ +
Sbjct: 300 SRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLK 359
Query: 440 EA 441
EA
Sbjct: 360 EA 361
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 61/146 (41%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+H A F+ M P I + ++ SL++ + A+ L +ME K I D VT
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + + ++++ + P T + LMK C+ V L+ ++ +G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFE 443
F + + L+ GLC G A +
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIK 258
>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
Length = 851
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 98/398 (24%), Positives = 184/398 (46%), Gaps = 15/398 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L R F + K L F ++ P + + +M D+A+ L+ +
Sbjct: 14 NILIRGFCSVGELQKGLGCFG-EMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72
Query: 131 RT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQ 186
P+L+ S +++++ + + S +E E + M G + F +E +N LL
Sbjct: 73 SKGMQPNLI---SYNVIINGLCREGSMKEAWEILEEM------GYKGFTPDEVTYNTLLN 123
Query: 187 AFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+C + +A + +++ + +P+ T L+ ++ ++ F+ +M +RG RP
Sbjct: 124 GYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRP 183
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ TY IDG+ ++G +A R+ EM PS+ T IHG ++ + +A +
Sbjct: 184 NERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVV 243
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
EM ++ L PD+ +Y+ +IS R +L+ A ++ EM EK + D VTY ++ GL +
Sbjct: 244 QEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEM 303
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L C L M++ P T L+ +CV ++ L+L +I +GF P
Sbjct: 304 RRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTY 363
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+L+ GL + R EA +++ S+ +Y L
Sbjct: 364 SVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTL 401
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 151/313 (48%), Gaps = 3/313 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++ FC+ E+++ F ++ PN T N L+ + + G + M
Sbjct: 13 YNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMS 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P++++YN+ I+G C++G +A + EEM P T TL++G N H
Sbjct: 73 SKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFH 132
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA + EM + + P + Y A+I+S+ + R+LN AME D+M + + + TY T+
Sbjct: 133 QALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLI 192
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + L ++ + M E F P T + CV R++ L + ++++G
Sbjct: 193 DGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLA 252
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + +++G C +G + AF+ ++M+ + +Y L + L + + DL
Sbjct: 253 PDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDL 312
Query: 480 DRMIKNLQAVLPP 492
+ + L LPP
Sbjct: 313 SQEM--LDMGLPP 323
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 97/376 (25%), Positives = 165/376 (43%), Gaps = 29/376 (7%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISK 151
+ + FTP + L+ + F QA + + + R PS++T ++ ++ + K
Sbjct: 106 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTAL---INSMCK 162
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLL-SRF 208
++ +E FD+M IR E + L+ F Q + EA + ++ S F
Sbjct: 163 ARNLNRAMEFFDQMR------IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGF 216
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
+P+ T N + G + EMV +G P VV+Y+ I G+C+KG A +
Sbjct: 217 SPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQ 276
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ +EM P T ++LI G +R + +A L EM L PD Y +I++
Sbjct: 277 MKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYC 336
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL-------------- 374
DLN A+ L DEM K D VTY + GL K + +L
Sbjct: 337 VEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDV 396
Query: 375 -YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
YD +IE + ++VV L+K FC+ + ++ +++R P ++++ G C
Sbjct: 397 TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHC 456
Query: 434 SRGRWEEAFECSKQML 449
G +AF K+M+
Sbjct: 457 RGGNLPKAFNLYKEMI 472
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ P+V TYNI I G+C G + F EMER CLP++ T TLI +
Sbjct: 1 MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I +A L M + ++P++ +YN +I+ L R + A E+++EM K D VTY+T
Sbjct: 61 IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K ++ M+ P T L+ C ++ + + + RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ L+ G +G EA+ +M
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211
>gi|357129397|ref|XP_003566348.1| PREDICTED: pentatricopeptide repeat-containing protein At3g62470,
mitochondrial-like [Brachypodium distachyon]
Length = 649
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/463 (23%), Positives = 199/463 (42%), Gaps = 15/463 (3%)
Query: 25 STTTQSSEIERITRIIND--HPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSN 82
++ + R+ I D D L TL P PLS LV VL R AH
Sbjct: 164 GASSHPEHVGRVCAAIADVMAAGADANLEATLSALSP---PLSEALVLAVLDRFKHAHRP 220
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
+ FF++ F TP + K LHIL + R F+ L+ + + L + +
Sbjct: 221 SRR---FFQWAAASDEFEHTPVTYCKMLHILGKARQFETMVALVQEMGKA--GALCMDAF 275
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I + + + + F+ M F G E FN LL A + KEA VF
Sbjct: 276 KIAIKSFAAAGEIKNAVGVFEMMRVHGF----DDGVESFNCLLVALAQEGLGKEAARVFD 331
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ ++ P+ ++ L+L + + ++ +++M+ +G +P VV +N IDG +
Sbjct: 332 RMRDQYTPDLRSYTALMLAWCNARNLVEAGRVWNDMLEKGMKPDVVVHNTMIDGLLRGQR 391
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A+++FE M+ P++ T T LI + A + F+EM +P++ Y
Sbjct: 392 RPEAVKMFELMKAKGPPPNVWTYTMLIRDHCKQGKLDMAMRCFEEMQVAGCQPEVATYTC 451
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ + ++ +++EM +K D TY+ + L + + ++Y +MI
Sbjct: 452 LLVGYGNAKRMDRVTAMLEEMAQKGCPPDGRTYNALIKLLTNRNMPDDAVRIYKKMITKG 511
Query: 383 FVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T M+MK +F +G +W + +G CP ++ + + G GR EA
Sbjct: 512 LEPTIHTYNMMMKSYFLGGRNYAMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPAEA 571
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+ ++M+ + + + Y +A + L +L + +K
Sbjct: 572 CKFLEEMIQKGMKAPQIDYNKFAADFSKAGKPDILYELAQKVK 614
>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
Length = 581
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 15/394 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV----QRTHPSLLTLK 140
+A +FF ++ ++P A+ L L + +AW L + ++ P L+T
Sbjct: 133 EAKQFFD-SMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYN 191
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++ I F E+T EA ++ +++ + +N +L + M EA +
Sbjct: 192 TL------IDGFCRVEKTDEAM-KLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEM 244
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F K++ S APN T +I+L G G++ Y EM + F P V+ N ID CK
Sbjct: 245 FKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCK 304
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
DA ++ EEM ++ +P + T L+ G + +A +LF M PDI +
Sbjct: 305 AKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVS 364
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y+ +++ L + ++ A L D M E+++ D VT++ + GL K+ L+ L D M
Sbjct: 365 YSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMS 424
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E +P T LM C + R D + L+ Y++++G ++++ GLC G+
Sbjct: 425 EHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLA 484
Query: 440 EAFECSKQMLVRRRQVSE--ASYRMLQRYLVQAN 471
+A K M+ + S +Y L L++A
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAG 518
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/422 (21%), Positives = 179/422 (42%), Gaps = 49/422 (11%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P + + L + +A E++ + + +P + T +I++ R+ + +
Sbjct: 6 FEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATY---TIIVDRLCRAGKVD 62
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
E E F +M ER + +N L+ C + ++ A + ++ S+ + P+N T
Sbjct: 63 EADELFHKMIERGC-----SANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNIT 117
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV-------------------------- 248
N +L G G V+ + F+ M RG+ P VV
Sbjct: 118 YNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMD 177
Query: 249 -----------TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
TYN IDG+C+ +AM+LF+++ +P T +++ G N
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++F +M P+ Y+ ++S R ++ +EL +EM EKR D + +
Sbjct: 238 MDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNA 297
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L K+ ++ K+ + M + VP T +L+ C VD L+ ++D G
Sbjct: 298 VIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNG 357
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P + +++ GLC + +A +M+ R+ ++ +L L +A ++ +
Sbjct: 358 CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAK 417
Query: 478 DL 479
DL
Sbjct: 418 DL 419
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 114/254 (44%), Gaps = 9/254 (3%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M +GF P VVTY+ I G CK G +A+ + EEM P + T T ++
Sbjct: 1 MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A +LF +M +R + AYNA+I+ L + ++ A +L++EM K DN+TY+T
Sbjct: 61 VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY----- 412
+ GL + + + +D M + P L+ +V WG
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKV---AEAWGLFKTMD 177
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QAN 471
+ DR P + L+ G C + +EA + K ++ + +Y + L ++N
Sbjct: 178 MADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSN 237
Query: 472 ANEKLEDLDRMIKN 485
+E E +M+ +
Sbjct: 238 MDEAEEMFKKMVDS 251
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 85/348 (24%), Positives = 138/348 (39%), Gaps = 54/348 (15%)
Query: 57 HLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARM 116
++P T +S L LG A SN +A E FK + P + L R+
Sbjct: 218 YMPDTVTYNSIL----LG--LARKSNMDEAEEMFK-KMVDSGCAPNGATYSIVLSGHCRV 270
Query: 117 RYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
+ EL + +R P +L ++ ML + K + LE ++ V
Sbjct: 271 GNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDV--- 327
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEM 233
+N+LL C + +A +F ++ AP+ + +++L G ++ V +
Sbjct: 328 ----VTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARV 383
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-- 291
+ M+ R P VVT+NI +DG CK G +A L + M LP T TTL+HG
Sbjct: 384 LFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLC 443
Query: 292 -------------------------------AGLVR--NIHQARQLFDEMPKRN--LKPD 316
AGL R + QA F M K + PD
Sbjct: 444 RDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPD 503
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ Y ++++LI ++ A++ +M D V Y+T+ GL K
Sbjct: 504 VVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRK 551
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 30/262 (11%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTT------PLSSTLVENVLGRLFAAHS---NG 83
+E +++I PD + LL L +T L ST+V+N ++S NG
Sbjct: 315 LEEMSKI---GAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNG 371
Query: 84 L-------KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSL 136
L A F ++ P F + L + D+A +L+ V H L
Sbjct: 372 LCKTNKVHDARVLFDRMIER-KLVPDVVTFNILMDGLCKAGKLDEAKDLLD-VMSEHNVL 429
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+ + ++ + + + +E + F M E+ + N++L C + ++
Sbjct: 430 PDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPH-----NIVLAGLCREGKLA 484
Query: 196 EARSVF---VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+A F VK F+P+ T L+ E+G V ++ +M G P V YN
Sbjct: 485 QALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAYNT 544
Query: 253 RIDGYCKKGCFGDAMRLFEEME 274
++G K+G A RL + M+
Sbjct: 545 LMNGLRKQGRHIQADRLTQAMK 566
>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 729
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 114/434 (26%), Positives = 187/434 (43%), Gaps = 43/434 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL FFK L P F + AF L IL A+ +M + ++ + I+
Sbjct: 122 ALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERI-------ISFEMYGIV 174
Query: 146 LSRISKFQSYEETLEAFDRMEREIFV--------------------------------GI 173
I + +Y+ L F++M R F+ GI
Sbjct: 175 DVLIGGYLNYQ-CLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGI 233
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAME 232
R + +N +L +FC E++ A + K+ R P+ T N+L+ G + G++ +
Sbjct: 234 RPTVTT-YNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAK 292
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
EM G R S TYN I GYCKKG +A+ L+EEM P++ + T+++G
Sbjct: 293 GLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGF 352
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ ARQ +M K+NL PDI +YN +I R ++ A L+DE+ + + +
Sbjct: 353 CKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNI 412
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+T+ GL + LE KL + MI P T +L+ C + + +
Sbjct: 413 VTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDE 472
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-AN 471
++ G P A + G G +AF+ ++ML + +Y + L + N
Sbjct: 473 MLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGN 532
Query: 472 ANEKLEDLDRMIKN 485
E E L +MI++
Sbjct: 533 LEEAGELLQKMIRD 546
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 118/255 (46%), Gaps = 10/255 (3%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N ++ FC + +M +AR +L + P+ + N L+ GF G++ + E+
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R ++VTYN IDG C+ G A++L E+M P + T T L++GA + N+
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A++ FDEM L PD AY A I ++ D A +L +EM K D +TY+
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K LE +L +MI VP T M N + G ++ ++ RG P
Sbjct: 526 GLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTP 585
Query: 421 ---------HGHALD 426
H HAL+
Sbjct: 586 TVVTYTVLIHAHALN 600
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 141/333 (42%), Gaps = 45/333 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC + EA + +L R + N T N L+ G GD+ +M+
Sbjct: 380 YNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMI 439
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P VVTY + ++G CK G A F+EM V P T I G + +
Sbjct: 440 NRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTA 499
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHT 357
+A +L +EM + PD+ YN ++ L + +L A EL+ +M R GH D+VTY +
Sbjct: 500 KAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKM--IRDGHVPDHVTYTS 557
Query: 358 MFFGLMKSSGL-EGVCKLYDRMIEGK---------------------------------- 382
M++ L EG YD + G+
Sbjct: 558 FMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKG 617
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
VP T +L+ FC ++D + + ++G P+ + +L+ C+ G+W+EA
Sbjct: 618 VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEAL 677
Query: 443 ECSKQMLVRRRQVSEASYRMLQR-----YLVQA 470
QML +R + ++ L + Y VQA
Sbjct: 678 RLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQA 710
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 6/211 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV + C ++EA + K++ P++ T + E+G + +++M+
Sbjct: 520 YNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDML 579
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+VVTY + I + G AM F EM+ +P++ T LI+G VR +
Sbjct: 580 SRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMD 639
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA + F EM ++ + P+ Y +I+ A+ L +M KRI D+ T+ +
Sbjct: 640 QACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALL 699
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
L K ++ V + IE + RT+
Sbjct: 700 KKLDKDYKVQAV-----QFIESLILDGDRTI 725
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 86/218 (39%), Gaps = 10/218 (4%)
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
MER+ + LI G N +Q +F++M + PD+ N ++ L
Sbjct: 162 MERIISFEMYGIVDVLIGG---YLN-YQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNL 217
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L A+E+ M E I TY+TM K ++ L +M E P T +
Sbjct: 218 LVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNV 277
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ + L + G + + L+ G C +G EA ++M+ R
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337
Query: 453 RQVSEASYRMLQRYLVQ----ANANEKLEDLDRMIKNL 486
+ AS+ + + ++A ++L D+ + KNL
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDM--LKKNL 373
>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 724
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 92/330 (27%), Positives = 163/330 (49%), Gaps = 7/330 (2%)
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKE 224
+++F I K S FN L+ F T + +A++V +++ + P+ T N L+ G+ +
Sbjct: 336 KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWK 395
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G V +M +G +P+V +Y I +DG+CK G +A L EM P+
Sbjct: 396 KGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVG 455
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI I +A ++F EMP++ KPD+ +N++IS L ++ A+ L+ +M
Sbjct: 456 FNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMI 515
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRV 403
+ + + VTY+T+ ++ ++ KL + M+ +G + + T L+K C V
Sbjct: 516 SEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEI-TYNSLIKGLCRAGEV 574
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D +L+ ++ G P + ++L+ GLC G EEA E K+M++R ++ L
Sbjct: 575 DKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSL 634
Query: 464 QRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
L +A ++ED M + LQA PP
Sbjct: 635 INGLCRAG---RIEDGLTMFRKLQAEGIPP 661
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 134/296 (45%), Gaps = 8/296 (2%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ + T+ + ++ D+A+ L++ + T+ + ++S K E +E
Sbjct: 416 PNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTV-GFNCLISAFCKEHRIPEAVE 474
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F M R+ G + FN L+ C E+K A + ++S N T N L+
Sbjct: 475 IFREMPRK---GCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 530
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
F G++ +EMV +G +TYN I G C+ G A LFE+M R +
Sbjct: 531 NAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLV 590
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PS + LI+G + +A + EM R PDI +N++I+ L R + + +
Sbjct: 591 PSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 650
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+++ + I D VTY+T+ L K + C L D IE FVP RT +L++
Sbjct: 651 FRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQ 706
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 117/258 (45%), Gaps = 3/258 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+ +L+ FC ++ EA ++ ++ + PN N L+ F KE A+E+F EM
Sbjct: 421 YTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF-REM 479
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P V T+N I G C+ A+ L +M + + T TLI+ I
Sbjct: 480 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 539
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+AR+L +EM + D YN++I L R +++ A L ++M + +++ + +
Sbjct: 540 KEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNIL 599
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL +S +E + M+ P T L+ C R++ GL ++ L G
Sbjct: 600 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 659
Query: 419 CPHGHALDLLVTGLCSRG 436
P + L++ LC G
Sbjct: 660 PPDTVTYNTLMSWLCKGG 677
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/272 (23%), Positives = 120/272 (44%), Gaps = 6/272 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +NV+L+ + K A +VF +LSR P T +++ +V + +
Sbjct: 177 KSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRD 236
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ V Y I K +A++L EEM + C+P +T +I G
Sbjct: 237 MTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDR 296
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I++A ++ + M R PD Y +++ L + ++AA +L + + +V ++T
Sbjct: 297 INEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPT----SVIFNT 352
Query: 358 MFFGLMKSSGLEGV-CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + L+ L D + VP T L+ + V L L + + ++
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P+ ++ +LV G C G+ +EA+ +M
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEM 444
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF + E+KEAR + +++ + + + T N L+ G +G+V + +M+
Sbjct: 526 YNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKML 585
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G PS ++ NI I+G C+ G +A+ +EM P + T +LI+G I
Sbjct: 586 RDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIE 645
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+F ++ + PD YN ++S L + + A L+DE E ++ T+ +
Sbjct: 646 DGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705
Query: 360 FGLMKSSGLE 369
L+ L+
Sbjct: 706 QSLVPQETLD 715
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/294 (20%), Positives = 116/294 (39%), Gaps = 56/294 (19%)
Query: 190 TQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+QK + + V+ L+ + N KT++ LL+ K+ G V F+ S+
Sbjct: 97 SQKGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEGIV--------------FKESL 142
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQ-ARQLF 305
+R Y K G G RL EM V +C P+ ++ ++ + N H+ A +F
Sbjct: 143 FISIMR--DYDKAGFPGQTTRLMLEMRNVYSCEPTFKSYNVVLE-ILVSGNCHKVAANVF 199
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+M R + P + + ++ +L ++++A+ ++ +M + ++V Y T+ L K
Sbjct: 200 YDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKC 259
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ RV+ L L + G P
Sbjct: 260 N-----------------------------------RVNEALQLLEEMFLMGCVPDAETF 284
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ GLC R EA + +ML+R + +Y L L + + +DL
Sbjct: 285 NDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDL 338
>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 582
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 192/408 (47%), Gaps = 12/408 (2%)
Query: 83 GLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTL 139
GL +L F F + F P F + L + QA V Q H L
Sbjct: 119 GLNSLSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFH---LDQ 175
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
S +++ + K L+ R++ ++ + + +N+++ C K + +A
Sbjct: 176 VSYGTLINGLCKVGRITAALQLLKRVDGKLV----QPNAVMYNMIIDNMCKAKLVNDAFD 231
Query: 200 VFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ ++++ R +P++ T N L+ GF G + H+M+L P + T++I +D +C
Sbjct: 232 LYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFC 291
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G +A + + + + T +L+ G LV+ I++A+ +FD M R + ++
Sbjct: 292 KEGKVKEAKMMLGVTMKKDIILDVVTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQ 351
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+Y MI+ L + + ++ A+ L +EM ++I + VTY+++ GL K + V KL D M
Sbjct: 352 SYTTMINGLCKIKMVDEAVNLFEEMRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEM 411
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ P T ++ C N VD + L L D+G P + +L+ GLC G+
Sbjct: 412 HDRGQPPNIITYNSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKL 471
Query: 439 EEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
E+A + + +LV+ + +Y M+Q + V+ + L L +M N
Sbjct: 472 EDAQKVFEDLLVKGYNLDVYTYTVMIQGFCVKGLFDAALALLSKMEDN 519
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 90/368 (24%), Positives = 171/368 (46%), Gaps = 15/368 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + + + + A++L S + +R P T S+ I F +
Sbjct: 208 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSL------IYGFCIMGQL 261
Query: 159 LEAFDRMEREIFVGI--RKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTM 215
EA + + I I R + F++L+ AFC + ++KEA+ + V + + T
Sbjct: 262 KEAVGLLHKMILENINPRMY---TFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTY 318
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G+ ++ + + M RG +V +Y I+G CK +A+ LFEEM
Sbjct: 319 NSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRC 378
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P++ T +LI G G + I +L DEM R P+I YN+++ +L + ++
Sbjct: 379 RKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDK 438
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+ L+ ++++ I D TY + GL +S LE K+++ ++ + T ++++
Sbjct: 439 AIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQ 498
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FCV D L L + D G P+ ++++ L + + A + ++M + R +
Sbjct: 499 GFCVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREM-IARGLL 557
Query: 456 SEASYRML 463
E SY L
Sbjct: 558 DEKSYIYL 565
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 99/213 (46%), Gaps = 1/213 (0%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
TA+ + + +M L G T+NI I+ + + G + +F ++ + P+ T TL
Sbjct: 88 TALSL-HQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKGFDPNAITFNTL 146
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G L +IHQA D++ + D +Y +I+ L + + AA++L+ ++ K +
Sbjct: 147 IKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLV 206
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ V Y+ + + K+ + LY +M+ + P T L+ FC+ ++ +
Sbjct: 207 QPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQLKEAVG 266
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L +I P + +LV C G+ +EA
Sbjct: 267 LLHKMILENINPRMYTFSILVDAFCKEGKVKEA 299
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 80/175 (45%), Gaps = 3/175 (1%)
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+N P I +N ++SSL++ + + A+ L +ME I D T++ + GL
Sbjct: 64 KNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFN-ILINCFSQLGLNS 122
Query: 371 VC-KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+ ++ ++++ F P T L+K C+ + LN ++ +GF + L+
Sbjct: 123 LSFSVFGKILKKGFDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLI 182
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMI 483
GLC GR A + K++ + Q + Y M+ + +A N+ + +M+
Sbjct: 183 NGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMV 237
>gi|356540361|ref|XP_003538658.1| PREDICTED: pentatricopeptide repeat-containing protein At1g52640,
mitochondrial-like [Glycine max]
Length = 523
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/410 (24%), Positives = 186/410 (45%), Gaps = 11/410 (2%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ I+R+++DH +P L +L P + +S+ LV+ VL R ++ G A FF +
Sbjct: 47 VNEISRLLSDHRYPHHDLELSLN---PFSAQISTNLVDQVLKR---CNNLGFSAHRFFLW 100
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
P F + +F + IL + F W+ + ++ + + + ++ S+
Sbjct: 101 AKSIPGFQHSVMSFHILVEILGSCKQFAILWDFLIEMRGSCHYEINSEIFWLIFRAYSQA 160
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
+ + +F+RM+ GI+ +F+ LL C K +K+A+ F + +RF
Sbjct: 161 NLPDGAIRSFNRMDE---FGIKP-TINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLTA 216
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
KT +IL+ G+ + GD + M+ +G ++ YN + CK GC +A +F +
Sbjct: 217 KTYSILISGWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHD 276
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P T + IH ++ A ++ D+M + N+ P++ YN +I L +
Sbjct: 277 MLSKRVEPDAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEH 336
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A L+DEM + + D +Y+ + + +L RM + +P T M
Sbjct: 337 VEEAYLLLDEMISRGVRPDTWSYNAIQAYHCDHCEVNRAIRLMFRMEKDNCLPDRHTYNM 396
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SRGRWEEA 441
++K R D +WG + D+ F P +++ G C +G+ EEA
Sbjct: 397 VLKLLIRIGRFDKVTKVWGNMGDKKFYPSVSTYSVMIHGFCKKKGKLEEA 446
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 80/201 (39%), Gaps = 1/201 (0%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+R F M+ P++ L+ +++ QA+Q FD+ R L Y+ +IS
Sbjct: 166 AIRSFNRMDEFGIKPTINDFDKLLFILCKTKHVKQAQQFFDQAKNRFLLT-AKTYSILIS 224
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
D A EL M E+ D + Y+ + L K ++ ++ M+ + P
Sbjct: 225 GWGDIGDSEKAHELFQAMLEQGCPVDLLAYNNLLQALCKGGCVDEAKTIFHDMLSKRVEP 284
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T + + +C V L + + P+ + ++ LC EEA+
Sbjct: 285 DAFTYSIFIHSYCDADDVQSALRVLDKMRRYNILPNVFTYNCIIKRLCKNEHVEEAYLLL 344
Query: 446 KQMLVRRRQVSEASYRMLQRY 466
+M+ R + SY +Q Y
Sbjct: 345 DEMISRGVRPDTWSYNAIQAY 365
>gi|122236160|sp|Q0WP85.1|PP150_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At2g13420, mitochondrial; Flags: Precursor
gi|110738270|dbj|BAF01064.1| hypothetical protein [Arabidopsis thaliana]
Length = 509
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 115/436 (26%), Positives = 193/436 (44%), Gaps = 29/436 (6%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
L+ L+ L RL N AL FF++ P + TP +F + IL R+R FD
Sbjct: 69 LTPNLIHQTLLRL---RHNSKIALSFFQYLRSLPSPSTTPTSFNLIIDILGRVRQFDVVR 125
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+L+ + +T P ++ I++ R+ + + AFD + F+ R+F EF
Sbjct: 126 QLIVEMDQTSP-----ETFLILVKRLIAAGLTRQAVRAFD--DAPCFLENRRFRLVEFGF 178
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C K A VF + F + K IL+ G+ + + E F EM+ G
Sbjct: 179 LLDTLCKYGYTKMAVGVFNERKEEFGSDEKVYTILIAGWCKLRRIDMAEKFLVEMIESGI 238
Query: 244 RPSVVTYNIRIDGYCKKGCFG----------DAMRLFEEMERVACLPSLQTITTLIHGAG 293
P+VVTYN+ ++G C+ +A ++F+EM + P + + + ++H
Sbjct: 239 EPNVVTYNVLLNGICRTASLHPEERFERNVRNAEKVFDEMRQRGIEPDVTSFSIVLH--- 295
Query: 294 LVRNIHQARQLFDE---MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ H+A D+ M + + P I Y +++ L C L A EL++ M E I
Sbjct: 296 MYSRAHKAELTLDKMKLMKAKGISPTIETYTSVVKCLCSCGRLEEAEELLETMVESGISP 355
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ TY+ F G LY +M G P T+T +L+ F +++ +W
Sbjct: 356 SSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTFINLGKMETVKEIW 415
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
L P + LV GLCS+ +W+EA +M+ R + ++ L + L+Q+
Sbjct: 416 DDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQKLTFETLYKGLIQS 475
Query: 471 NANEKLEDLDRMIKNL 486
N K+ R+ K L
Sbjct: 476 N---KMRTWRRLKKKL 488
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 125/288 (43%), Gaps = 18/288 (6%)
Query: 107 EKTLHIL----ARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSY--EET 158
EK IL ++R D A + + + + P+++T +++L+ I + S EE
Sbjct: 207 EKVYTILIAGWCKLRRIDMAEKFLVEMIESGIEPNVVT---YNVLLNGICRTASLHPEER 263
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNN 212
E R ++F +R+ G E F+++L + ++ E +KL+ +P
Sbjct: 264 FERNVRNAEKVFDEMRQRGIEPDVTSFSIVLHMY-SRAHKAELTLDKMKLMKAKGISPTI 322
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T ++ G + E MV G PS TYN Y + AM L+ +
Sbjct: 323 ETYTSVVKCLCSCGRLEEAEELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRK 382
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ C PS QT L+ + + ++++D++ PD+ +Y +++ L
Sbjct: 383 MKNGLCKPSTQTYNVLLGTFINLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEK 442
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
A EM E+ +T+ T++ GL++S+ + +L ++ E
Sbjct: 443 WKEACGYFVEMIERGFLPQKLTFETLYKGLIQSNKMRTWRRLKKKLDE 490
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/211 (21%), Positives = 90/211 (42%), Gaps = 5/211 (2%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ S SI+L S+ E TL+ M+ + GI E + +++ C+ ++EA
Sbjct: 287 VTSFSIVLHMYSRAHKAELTLDKMKLMKAK---GISP-TIETYTSVVKCLCSCGRLEEAE 342
Query: 199 SVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ ++ S +P++ T N +K D Y +M +PS TYN+ + +
Sbjct: 343 ELLETMVESGISPSSATYNCFFKEYKGRKDANGAMNLYRKMKNGLCKPSTQTYNVLLGTF 402
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
G ++++++ P L + T+L+HG +A F EM +R P
Sbjct: 403 INLGKMETVKEIWDDLKASETGPDLDSYTSLVHGLCSKEKWKEACGYFVEMIERGFLPQK 462
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ + LI+ + L +++E+ I
Sbjct: 463 LTFETLYKGLIQSNKMRTWRRLKKKLDEESI 493
>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 511
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 152/302 (50%), Gaps = 1/302 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + +A V+ +++ + +P+ T L+ GF G + +EM
Sbjct: 200 YNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMK 259
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P+V T+NI ID K+G +A L M + P + T +LI G LV +
Sbjct: 260 LKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVK 319
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ +F M +R + PD+ Y MI+ L + + ++ AM L +EM+ K + D VTY+++
Sbjct: 320 HAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLI 379
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE L RM E P + +L+ C + R++ ++ L+ +G+
Sbjct: 380 DGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYH 439
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ HA +L+ LC G ++EA + +M + ++ ++ R L + + N+K E +
Sbjct: 440 LNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKI 499
Query: 480 DR 481
R
Sbjct: 500 LR 501
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 157/370 (42%), Gaps = 71/370 (19%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++L+ FC Q + A SVF +L R F PN T+N L+ G G++ F+ ++V
Sbjct: 95 LSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLV 154
Query: 240 LRGF-----------------------------------RPSVVTYNIRIDGYCKKGCFG 264
+GF +P VV YN I+ CK G
Sbjct: 155 AQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLG 214
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA ++ EM P + T TTLIHG ++ ++ +A L +EM +N+ P++ +N +I
Sbjct: 215 DACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILI 274
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL---------------MKSSG-- 367
+L + + A L+ M + I D TY+++ G M G
Sbjct: 275 DALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVT 334
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ G+CK L++ M +P T L+ C N ++ + L
Sbjct: 335 PDVQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIAL 394
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++G P ++ +L+ GLC GR E+A E +++L + ++ +Y +L L +
Sbjct: 395 CKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCK 454
Query: 470 ANANEKLEDL 479
A ++ DL
Sbjct: 455 AGFFDEALDL 464
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 127/272 (46%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC +KEA S+ ++ L PN T NIL+ + G + ++ M+
Sbjct: 235 YTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMM 294
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P V TYN IDGY A +F M + P +Q T +I+G + +
Sbjct: 295 KACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVD 354
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF+EM +N+ PDI YN++I L + L A+ L M+E+ I D +Y +
Sbjct: 355 EAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILL 414
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS LE +++ R++ + +L+ C D L+L + D+G
Sbjct: 415 DGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCM 474
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P D+++ L + ++A + ++M+ R
Sbjct: 475 PDAVTFDIIIRALFEKDENDKAEKILREMIAR 506
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 87/201 (43%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P + T +I I+ +C + A +F + + P+ T+ TLI G I +
Sbjct: 86 NGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKK 145
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A D++ + + D +Y +I+ L + + A L+ ++E + D V Y+T+
Sbjct: 146 ALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIN 205
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K+ L C +Y MI P T L+ FC+ + +L + + P
Sbjct: 206 SLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINP 265
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ ++L+ L G+ +EA
Sbjct: 266 NVCTFNILIDALSKEGKMKEA 286
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 88/202 (43%), Gaps = 2/202 (0%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+ + LF++ E P L T++ LI+ +I A +F + KR P+ N
Sbjct: 73 YPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHPNAITLNT 132
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L ++ A+ D++ + D V+Y T+ GL K+ + V +L R +EG
Sbjct: 133 LIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLL-RKLEGH 191
Query: 383 FV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
V P ++ C N + +++ +I +G P L+ G C G +EA
Sbjct: 192 SVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHLKEA 251
Query: 442 FECSKQMLVRRRQVSEASYRML 463
F +M ++ + ++ +L
Sbjct: 252 FSLLNEMKLKNINPNVCTFNIL 273
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/127 (22%), Positives = 58/127 (45%)
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ + L+ + V L+ + P T+ +L+ FC + L +++ ++
Sbjct: 60 FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
RGF P+ L+ L+ GLC RG ++A Q++ + Q+ + SY L L + +
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179
Query: 475 KLEDLDR 481
+ L R
Sbjct: 180 AVARLLR 186
>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
Length = 699
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 198/468 (42%), Gaps = 47/468 (10%)
Query: 47 DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAF 106
D + LL+ + + + +V L + ++ALE F+ + P +
Sbjct: 72 DLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTY 129
Query: 107 EKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+H L + FD+A ++ + Q P +T S ++ + KF S E+ AF
Sbjct: 130 TALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTF---STLIDGLCKFGSEEQ---AFRV 183
Query: 165 MEREIFVGI---------------RKFGSEE--------------------FNVLLQAFC 189
+E I G+ K+ S E FN+++ FC
Sbjct: 184 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 243
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
K++ A + ++ + PN T IL+ G ++ V + +MV+ G P+VV
Sbjct: 244 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVV 303
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY+ I+G CK+G DA LF+ MER C P++ T LI G + I +ARQL+ M
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN-VTYHTMFFGLMKSSG 367
+ PDI YN++I L + ++ A +L + E + N VTY T+F G
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ C+++ +++ F P T L+ +C R + L + +GF P + L
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
++ GL E A + M R Y ++ + +A+ ++K
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDK 531
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 121/271 (44%), Gaps = 3/271 (1%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L C +EA ++F ++R PN T IL+ GF +GD+ EM
Sbjct: 26 NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF + V + + G C G +A+ F M + C P + T T L+H +
Sbjct: 86 SGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDE 144
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A+ + EM + PD ++ +I L + A +++++ ++ +G+ + + T+
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQ 204
Query: 361 GLM-KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +E K+ +I F P +++ FC +D L +I++G
Sbjct: 205 RLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCV 264
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
P+ +L+TGLC R EA + ++M++
Sbjct: 265 PNVFTFTILITGLCKANRVGEAQQLLEKMVM 295
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 83/388 (21%), Positives = 153/388 (39%), Gaps = 57/388 (14%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+P + ++ L + D A+EL ++R + P+++T +I++ + K + EE
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT---HNILIDGLCKAKRIEE 355
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPN 211
+ + RM R+ G +N L+ C ++ EA +F + A N
Sbjct: 356 ARQLYHRM--------RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 407
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T + L G+ G + + +V +GF P + TY I YCK + + L E
Sbjct: 408 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 467
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN---------- 321
EM P + T++ ++ G + +A QLFD M R D YN
Sbjct: 468 EMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARAS 527
Query: 322 ----------------------------AMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
A++ SL + + A +L+ +M E+
Sbjct: 528 KHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVS 587
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+Y+ + GL + + ++++ M+ P+ TV +++ + C +VD L +
Sbjct: 588 SYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 647
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEA 441
G CP + L+ G C GR + A
Sbjct: 648 SKLGCCPDIETCNTLIGGYCKSGRADLA 675
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 81/179 (45%), Gaps = 4/179 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR----FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+N++++ + +A +V +++ + F P++ ++ L+ + G + H
Sbjct: 516 YNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLH 575
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M RGF +V +YN + G + + +A ++FE M P + T+ +I
Sbjct: 576 KMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAA 635
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A +L M K PDI N +I + + A +L++EM E + ++ T+
Sbjct: 636 KVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTH 694
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/274 (20%), Positives = 110/274 (40%), Gaps = 36/274 (13%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+V + N +D C+ +A+ LF C+P+ T LI G ++ A QL
Sbjct: 21 NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80
Query: 306 DEMPK----------------------------------RNLKPDIGAYNAMISSLIRCR 331
+EM ++ PD+ Y A++ +L +
Sbjct: 81 EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAPDVMTYTALVHALCKAG 140
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A ++ EM + D VT+ T+ GL K E ++ + +I+
Sbjct: 141 KFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFE 200
Query: 392 MLMKFFCVNFR-VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+++ C + V+L + G +I +GF P +L++ G C + A++ + M+
Sbjct: 201 TIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIE 260
Query: 451 RRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMI 483
+ + ++ +L L +AN E + L++M+
Sbjct: 261 KGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R F PS + ++ C+ G DA +L +M ++ + L+ G ++ +
Sbjct: 545 RKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDE 604
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A Q+F+ M P+I N +IS L ++ A EL+ M + D T +T+
Sbjct: 605 ATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIG 664
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
G KS + KL + M E P T
Sbjct: 665 GYCKSGRADLARKLLEEMTEAGLEPNDTT 693
>gi|125528152|gb|EAY76266.1| hypothetical protein OsI_04202 [Oryza sativa Indica Group]
Length = 528
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 190/404 (47%), Gaps = 13/404 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S +V VL RL ++ A F++ P + P A+ L ILA+ R FD A
Sbjct: 110 SEPVVVAVLARL---RNSCAAAHAAFRWASAQPGYAPGRHAYHSMLAILAKHRRFDDARA 166
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L+ ++R+ SL + ++ +++ R + + AF + +G R G EF+ L
Sbjct: 167 LLDQMRRS--SLASPAAVMLLIRRYCAARDVAGAVAAFRALPS---LGFRP-GVAEFHGL 220
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGF 243
L A C K +++A + + F K+ N++L G+ V + F++ M ++G
Sbjct: 221 LTALCRYKNVQDAEHLLLSSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGI 280
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+ VV+Y I + K G M+LF M+ +P + +++ R +++A+
Sbjct: 281 KRDVVSYGSMISCFSKAGSLDTVMKLFNRMKEAGVVPDRKIYNAVVYALAKGRCVNEAKA 340
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L M ++ + PD +N++I L + R + A +++D+M + + T+H + +
Sbjct: 341 LVRSMEEKGVAPDTATFNSLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLD--V 398
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S +E V L D+M E + P+ T +ML++ FC + D LW + G P
Sbjct: 399 ARSPIE-VFDLLDKMKELQCDPEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRS 457
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
A +L+ GL GR EE+ + ++M + + + M+Q +L
Sbjct: 458 AYIVLIHGLFLNGRLEESAKYYEEMKAKGFPPEKKTEEMIQAWL 501
>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
Length = 831
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 183/402 (45%), Gaps = 19/402 (4%)
Query: 53 TLLQHLPQTTPLSSTLVENVL--GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
T+ + L + P+ L+ ++ GR+ A L+ + + P+ +
Sbjct: 330 TMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLE--------IAGRNIQPSSGTCHSVI 381
Query: 111 HILARMRYFDQAWELM-SHVQRTHPSLLTLKSMSIM-LSRISKFQSYEETLEAFDRMERE 168
L + D A L+ + ++R + + SM I L + K Q +E L+ DR
Sbjct: 382 QELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRK--- 438
Query: 169 IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESG 226
+ R +N LL + C K++ +A ++F ++S F P+ + +IL+ GF +
Sbjct: 439 --ISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKID 496
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
++ E Y +M+ P+V TYN ++G +KG DA ++EEM C P + T +
Sbjct: 497 ELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYS 556
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
TLIHG L R QA +LF+ M R +P+ YN ++ L + + A EL +M E+
Sbjct: 557 TLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVER 616
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D VTY T+ +G +E +++D M+ P L+K F +
Sbjct: 617 GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEA 676
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ ++ R P + ++++ GL R ++A E ++M
Sbjct: 677 KQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 718
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
++ L+ F ++ +A +F ++SR PN T N LL G KES A E+F +M
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF-RKM 613
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V RG P VTY + G+C G A+ +F+EM P + L+ G
Sbjct: 614 VERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 673
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHT 357
+A+QLF M R KPD ++N MI L + + L+ A+E+ + ME+ D VTY++
Sbjct: 674 GEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 733
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ FGL L K++ + K P +L++
Sbjct: 734 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLE 771
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 22/240 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+P + +H + R DQA EL + + P+ +T + +L + K +E
Sbjct: 549 SPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTY---NCLLHGLCKESKPDE 605
Query: 158 TLEAFDRM-EREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
E F +M ER G + + LL FC ++++A VF +++S+ P+
Sbjct: 606 AHELFRKMVER---------GCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
N LL GF +G + + MV R +P V++NI IDG K DA+ +FE
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFE 716
Query: 272 EMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
ME+ C P L T +LI G + + +A ++F E+ + L PD A+N ++ + I+C
Sbjct: 717 RMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEA-IKC 775
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/428 (19%), Positives = 169/428 (39%), Gaps = 46/428 (10%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILA--RMRYFDQAWELMSHVQRTHPSLLTLKSM 142
KA+E K PDA + +LA ++ D+A++L + + L +
Sbjct: 249 KAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAW 308
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ LS + K E+ EA M+ + +++L++ + +A +
Sbjct: 309 TAFLSGLCKSGKIEQAFEACRTMQESL-----SSSQPVYDMLIRLLIESGRIDKAEEACL 363
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R P++ T + ++ ++G V + M+ RG+ P + T+++ I+ CK
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423
Query: 262 CFGDAMRLFEEMERV--------------------------------------ACLPSLQ 283
+A + M+R + +P +
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+ + LI G + + +A +L+ +M N P++ YNA ++ L+R + A + +EM
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEM 543
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
D +TY T+ G + + +L++ MI P T L+ C +
Sbjct: 544 VAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKP 603
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D L+ +++RG P L+ G C+ G+ E+A E +M+ + +Y L
Sbjct: 604 DEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCL 663
Query: 464 QRYLVQAN 471
+ +A
Sbjct: 664 LKGFFRAG 671
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/342 (21%), Positives = 132/342 (38%), Gaps = 39/342 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ L C ++++A + + + ++L+ ESG + E E+
Sbjct: 308 WTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAG 367
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG--------- 291
R +PS T + I CK G A+ L E M + P + T + LI+
Sbjct: 368 RNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQE 427
Query: 292 -----AGLVRNI-----------------------HQARQLFDEM-PKRNLKPDIGAYNA 322
G+ R I HQA +F M +R+ PD+ +Y+
Sbjct: 428 AQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSI 487
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I + +L A +L +M + + TY+ GLM+ + +Y+ M+
Sbjct: 488 LIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAG 547
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T L+ F + + D L+ +I RG P+ + L+ GLC + +EA
Sbjct: 548 CSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAH 607
Query: 443 ECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMI 483
E ++M+ R +Y +L + + +E D M+
Sbjct: 608 ELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV 649
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/291 (21%), Positives = 115/291 (39%), Gaps = 7/291 (2%)
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
V VK + +T+ ++ ++ G+ F+ + R F+ V TYN +D +
Sbjct: 85 VVVKKWDGKSSCRETVGAVIKHLRDGGEALT---FFRWLQARNFKHDVFTYNCLLDKLIR 141
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
A ++FE+M +P+ T L+ + RN +A + F EM + KP
Sbjct: 142 HRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTL 201
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y + L + EKR+ + + + + KL+ M+
Sbjct: 202 YQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMV 261
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP-HGHALDLLVTGLCSRGRW 438
+ P ++ C +D L+ + P + A ++GLC G+
Sbjct: 262 KSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKI 321
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED--LDRMIKNLQ 487
E+AFE + M S+ Y ML R L+++ +K E+ L+ +N+Q
Sbjct: 322 EQAFEACRTMQ-ESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQ 371
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 130/322 (40%), Gaps = 15/322 (4%)
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTL 139
+G +AL FF++ LQ +F + L L R R QA ++ + Q P+ T
Sbjct: 109 DGGEALTFFRW-LQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTY 167
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF-CTQKEMKEAR 198
++++ ++ +E + F M + F K S + + + T KE + +R
Sbjct: 168 ---AVLVQSSCYERNSDEAVRFFGEMVDKGF----KPSSTLYQKVTECLKATGKEGEFSR 220
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L R A LL+ F + MV G +P Y+ + +C
Sbjct: 221 VFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHC 280
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPD 316
K +A +LF EM + P L + +GL ++ I QA + M + +L
Sbjct: 281 KLENLDEAFKLFLEMAVESKAP-LNNVAWTAFLSGLCKSGKIEQAFEACRTM-QESLSSS 338
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y+ +I LI ++ A E E+ + I + T H++ L K+ ++ L +
Sbjct: 339 QPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLE 398
Query: 377 RMIEGKFVPKTRTVVMLMKFFC 398
MI+ + P T ML+ C
Sbjct: 399 TMIKRGYCPDMATHSMLINELC 420
>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 512
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 143/286 (50%), Gaps = 1/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K + +A + ++++ R P T N L+ G G + H+M+
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L P+V T++I +D +CK+G +A +F M + P++ T +L++G LV ++
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+ M + + PD+ +Y+ MIS + + ++ AM+L +EM K+I D VTY+++
Sbjct: 332 KAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLI 391
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + KL M + P T L+ C N VD + L L D
Sbjct: 392 DGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQ 451
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P ++L+ GLC GR ++A + + +LV + +Y + +
Sbjct: 452 PSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIK 497
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/367 (19%), Positives = 152/367 (41%), Gaps = 8/367 (2%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
H + +F + + +++ ++ + H + PS++ + L + K Y
Sbjct: 31 HCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKI---LGSLVKANHYSI 87
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ +ME F GI ++L+ F + SVF +L + + P+ T+
Sbjct: 88 VVSLHRQME---FNGIAS-NLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLT 143
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G GD+ F+ +++ GF+ + V+Y I+G CK G A+ + ++
Sbjct: 144 TLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGK 203
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+ T+I G + ++ A + EM + + P + YN +I L L A
Sbjct: 204 LVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDA 263
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ L+ +M + I T+ + K ++ ++ M++ P T LM
Sbjct: 264 IGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNG 323
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C+ V+ +++ + G P H+ ++++G C +EA + ++M ++
Sbjct: 324 YCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPD 383
Query: 457 EASYRML 463
+Y L
Sbjct: 384 VVTYNSL 390
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/245 (22%), Positives = 105/245 (42%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +M G ++VT +I I+ + + G + +F + + P T+TTLI G L
Sbjct: 92 HRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCL 151
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+IH+A D++ + + +Y +I+ L + AA+E++ ++ K + D V
Sbjct: 152 KGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVM 211
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G+ K + Y M+ + P T L+ C+ ++ + L +I
Sbjct: 212 YNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMI 271
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
P + +LV C G+ +EA M+ + + + +Y L N
Sbjct: 272 LENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVN 331
Query: 475 KLEDL 479
K E +
Sbjct: 332 KAESI 336
>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic [Vitis vinifera]
Length = 772
Score = 135 bits (341), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 106/467 (22%), Positives = 196/467 (41%), Gaps = 9/467 (1%)
Query: 24 FSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQ-TTPLSSTLVENVLGRLFAAHSN 82
S+ ++ + H Q + P+ P TT L L S+
Sbjct: 25 LSSAHNCKPFSKLISFTSTHHHDQQAVSPSFSTLSPSPTTQLPQNFTPKQLRDALRRQSD 84
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
L+ + + P+F P+ +E+ L L + F ++ ++ T + +
Sbjct: 85 EDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRR-GTF 143
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I++ +KF+ ++E + D ME E + + F +N LL ++K V
Sbjct: 144 LILIESYAKFELFDEAVAVVDIMEEEFGLKLDAF---TYNFLLNVLVDGNKLKLVEIVNS 200
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++SR P+ T NIL+ + + + EM G P T+ + G+ ++G
Sbjct: 201 RMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEG 260
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A+R+ E+M C S T+ L+HG I + DEM +PD +N
Sbjct: 261 NMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFN 320
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++++ L R + A+E++D M ++ D TY+++ FGL K +E ++ ++MI
Sbjct: 321 SLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILR 380
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
F P T T L+ C +V+ L L +G P + L+ GLC A
Sbjct: 381 DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLA 440
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
E ++M + E +Y ML L + +LE+ ++K +++
Sbjct: 441 MELFEEMKTKGCHPDEFTYNMLIDSLC---SRGRLEEALSLLKEMES 484
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 101/361 (27%), Positives = 153/361 (42%), Gaps = 5/361 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++++++ K EE L D M E F R FN L+ C +K A +
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRF----TFNSLVNGLCRIGHVKHALEI 338
Query: 201 F-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
V L F P+ T N L+ G + G+V ++M+LR F P+ VTYN I CK
Sbjct: 339 LDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCK 398
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+ +A L + LP + T +LI G L N A +LF+EM + PD
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFT 458
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I SL L A+ L+ EME + VTY+T+ G K+ +E +++D M
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEME 518
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
T L+ C N RV+ L ++ G P + L+T C G +
Sbjct: 519 LQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIK 578
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
+A + + M + +Y L L +A E L R ++ VL P T V
Sbjct: 579 KAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVI 638
Query: 500 Q 500
+
Sbjct: 639 K 639
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 98/414 (23%), Positives = 181/414 (43%), Gaps = 17/414 (4%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS + NVL + + L F + + F P F ++ L R+ + A E
Sbjct: 279 SSNVTVNVLVHGYCKEGRIEEVLSFID-EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALE 337
Query: 125 LMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG--SEE 180
++ + + P + T S+ L ++ + EE +E ++M +R F +
Sbjct: 338 ILDVMLQEGFDPDIFTYNSLIFGLCKLGEV---EEAVEILNQMI------LRDFSPNTVT 388
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
+N L+ C + +++EA + L S+ P+ T N L+ G + + AME+F EM
Sbjct: 389 YNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELF-EEM 447
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P TYN+ ID C +G +A+ L +EME C ++ T TLI G + I
Sbjct: 448 KTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRI 507
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A ++FDEM + + ++ YN +I L + R + A +LMD+M + + D TY+++
Sbjct: 508 EEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSL 567
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
++ ++ + M P + T L+ RV+L L + +G
Sbjct: 568 LTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGM 627
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ ++ L R EA ++M+ + +Y+++ R L
Sbjct: 628 VLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGG 681
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/221 (27%), Positives = 96/221 (43%), Gaps = 2/221 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K ++EA +F ++ L + N T N L+ G ++ V +M+
Sbjct: 494 YNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G +P TYN + +C+ G A + + M C P T TLI G +
Sbjct: 554 MEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVE 613
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + + + YN +I +L R + + A+ L EM EK D VTY +F
Sbjct: 614 LASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVVF 673
Query: 360 FGLMKSSGLEG-VCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
GL G G M + F+P + +ML + C
Sbjct: 674 RGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCA 714
>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Brachypodium distachyon]
Length = 556
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 153/327 (46%), Gaps = 5/327 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S+ + +D M+R+ G F ++ ++ A+C ++ A
Sbjct: 217 TVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYF----YSAVINAYCRGGNVRRA 272
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN +T L+ GF + G + A EM +M LRG + + +N IDG
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDG 332
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+ G A+ + ME++ + T TL G V + A++L M ++ + P+
Sbjct: 333 YCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+Y +IS + D+ A L +ME K VTY+ M G +K+ + +
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK 452
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + VP T L+ CVN +VD+ L L+ + RG P+ A LV+GL G
Sbjct: 453 EMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEG 512
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
R EEAF+ ML + Y +L
Sbjct: 513 RSEEAFQLYDDMLAAGLTPDDTLYSVL 539
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 99/204 (48%), Gaps = 5/204 (2%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
EI + K G E +N L C M++A+ + + + APN + L+
Sbjct: 344 EIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIH 403
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ GD+ + +M +G RPSVVTYN+ IDGY K G +A R +EME+ +P +
Sbjct: 404 AKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDI 463
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T L+HG + + A +LF+EM R KP++ AY A++S L + A +L D+
Sbjct: 464 YTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDD 523
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSS 366
M + D+ Y + L S
Sbjct: 524 MLAAGLTPDDTLYSVLVGSLHTDS 547
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 137/328 (41%), Gaps = 5/328 (1%)
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
A +L+ + P+ +T S S+++ K S ++ D + R VG+ +
Sbjct: 131 AADLLGKAIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRH-GVGLNACC---Y 186
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL ++ Q+ + ++ +R P T IL+ G +GD++ +E Y EM
Sbjct: 187 NSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKR 246
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+ V Y+ I+ YC+ G A +F+E P+ +T LI+G + I
Sbjct: 247 KNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEA 306
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L +M R + + +N MI R + A+E+ ME+ I D TY+T+
Sbjct: 307 AEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLAC 366
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL + + +E KL M E P + L+ + L+ + +G P
Sbjct: 367 GLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
++++ G G EA K+M
Sbjct: 427 SVVTYNVMIDGYIKNGSIREAERFKKEM 454
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/242 (22%), Positives = 101/242 (41%), Gaps = 6/242 (2%)
Query: 245 PSVVT---YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P+ VT ++ +DG+CK G DA L +E+ R + +L+ RN
Sbjct: 143 PASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAV 202
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L EM R ++P +G Y ++ L R D++ + DEM+ K + D Y +
Sbjct: 203 AGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINA 262
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ + +++D + P RT L+ FC +++ L + RG +
Sbjct: 263 YCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHN 322
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ ++ G C G E+A E M ++ +Y L L + N ++ED +
Sbjct: 323 QIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVN---RMEDAKK 379
Query: 482 MI 483
++
Sbjct: 380 LL 381
>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g64320, mitochondrial; Flags: Precursor
gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 730
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 123/519 (23%), Positives = 218/519 (42%), Gaps = 50/519 (9%)
Query: 13 FPGISDRLAL----LFSTTTQSSEIERITRII---NDHPFPDQPLHPTLLQHLPQTTPLS 65
FPG + RL L ++S + I+ N H + L + +P T
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTL--- 217
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
V+ + F A + AL + +H P ++ +H L++ ++A +L
Sbjct: 218 --FTFGVVMKAFCAVNEIDSALSLLRDMTKH-GCVPNSVIYQTLIHSLSKCNRVNEALQL 274
Query: 126 MSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV-----------G 172
+ + P T + + L KF E + +RM F G
Sbjct: 275 LEEMFLMGCVPDAETFNDVILGLC---KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNG 331
Query: 173 IRKFGSEE----------------FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKT 214
+ K G + FN L+ F T + +A++V +++ + P+ T
Sbjct: 332 LCKIGRVDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCT 391
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G+ + G V H+M +G +P+V +Y I +DG+CK G +A + EM
Sbjct: 392 YNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMS 451
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P+ LI I +A ++F EMP++ KPD+ +N++IS L ++
Sbjct: 452 ADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIK 511
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+ L+ +M + + + VTY+T+ ++ ++ KL + M+ T L+
Sbjct: 512 HALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLI 571
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
K C VD +L+ ++ G P + ++L+ GLC G EEA E K+M++R
Sbjct: 572 KGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGST 631
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
++ L L +A ++ED M + LQA PP
Sbjct: 632 PDIVTFNSLINGLCRAG---RIEDGLTMFRKLQAEGIPP 667
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 133/296 (44%), Gaps = 8/296 (2%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ + T+ + ++ D+A+ +++ + T+ + ++S K E +E
Sbjct: 422 PNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTV-GFNCLISAFCKEHRIPEAVE 480
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F M R+ G + FN L+ C E+K A + ++S N T N L+
Sbjct: 481 IFREMPRK---GCKP-DVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLI 536
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
F G++ +EMV +G +TYN I G C+ G A LFE+M R
Sbjct: 537 NAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHA 596
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PS + LI+G + +A + EM R PDI +N++I+ L R + + +
Sbjct: 597 PSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTM 656
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+++ + I D VT++T+ L K + C L D IE FVP RT +L++
Sbjct: 657 FRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 116/258 (44%), Gaps = 3/258 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+ +L+ FC ++ EA +V ++ + PN N L+ F KE A+E+F EM
Sbjct: 427 YTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIF-REM 485
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P V T+N I G C+ A+ L +M + + T TLI+ I
Sbjct: 486 PRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEI 545
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+AR+L +EM + D YN++I L R +++ A L ++M N++ + +
Sbjct: 546 KEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNIL 605
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL +S +E + M+ P T L+ C R++ GL ++ L G
Sbjct: 606 INGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGI 665
Query: 419 CPHGHALDLLVTGLCSRG 436
P + L++ LC G
Sbjct: 666 PPDTVTFNTLMSWLCKGG 683
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/276 (23%), Positives = 114/276 (41%), Gaps = 30/276 (10%)
Query: 190 TQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFKESGDVTAMEMFYHEMVLRGF---- 243
+Q + + V+ L+ + N KT++ LL+ K+ G V +F ++R +
Sbjct: 103 SQNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFIS--IMRDYDKAG 160
Query: 244 ------------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
P+ +YN+ ++ C A +F +M P+L T
Sbjct: 161 FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTF 220
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
++ V I A L +M K P+ Y +I SL +C +N A++L++EM
Sbjct: 221 GVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFL 280
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
D T++ + GL K + K+ +RM+ F P T LM C RVD
Sbjct: 281 MGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDA 340
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+L+ Y I + P + L+ G + GR ++A
Sbjct: 341 AKDLF-YRIPK---PEIVIFNTLIHGFVTHGRLDDA 372
>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
Length = 1320
Score = 135 bits (340), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 155/325 (47%), Gaps = 7/325 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ ++S K + + FD M R+ V I + S ++ C +M EAR +F
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTS-----VIHGICKSGKMVEAREMF 405
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L + P+ T L+ G+ ++G++ +++MV +G P+VVTY DG CK
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A L EM R P++ T T+++G + NI Q +L +EM PD Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ + + ++ A EL+ M KR+ VT++ + G S LE +L + M+E
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLE 585
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T LMK +C+ + ++ + DRG P + ++L+ G C +E
Sbjct: 586 KGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKE 645
Query: 441 AFECSKQMLVRRRQVSEASYRMLQR 465
A+ K+M+ + V+ A+Y L R
Sbjct: 646 AWFLHKEMVEKGYSVTAATYDALIR 670
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 87/385 (22%), Positives = 177/385 (45%), Gaps = 7/385 (1%)
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS-KFQSYEETLEA 161
P F+ +L + +A +L + R + ++++ S ++ LSR+S F+ + ++
Sbjct: 171 PLVFDLYFQVLVENGFVLEAQKLFHKLLR-YGVVVSVDSCNLFLSRLSCNFEGIKIAVKV 229
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLL 220
F+ +G+ + + N++L C +++EA ++ V++ R P+ + +++
Sbjct: 230 FEEFPE---LGV-CWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ G++ + E+ +G +P YN I CK G +A +L M + P
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFP 345
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
TT+I G + N+ A +LFDEM ++ + PDI Y ++I + + + A E+
Sbjct: 346 DNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMF 405
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+EM K + D VTY + G K+ ++ ++++M++ P T L C N
Sbjct: 406 NEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKN 465
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+D+ L + +G P+ + + +V GLC G E+ + ++M + +Y
Sbjct: 466 GEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITY 525
Query: 461 RMLQRYLVQANANEKLEDLDRMIKN 485
L + K +L R++ N
Sbjct: 526 TTLMDAYCKMGEMAKAHELLRIMLN 550
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 137/294 (46%), Gaps = 4/294 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N ++ C E+ EA + ++ + ++ P+N ++ GF + G+V+A + EM
Sbjct: 315 YNNIILLLCKNGEVVEAEQL-LRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEM 373
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ P +VTY I G CK G +A +F EM P T T LI G +
Sbjct: 374 RRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEM 433
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A + ++M ++ L P++ Y A+ L + +++ A EL+ EM K + + TY+T+
Sbjct: 434 KEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTI 493
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K +E KL + M F P T T LM +C + L ++++
Sbjct: 494 VNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRL 553
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQAN 471
P ++L+ G C G E+ + ML + + ++ ++++Y ++ N
Sbjct: 554 QPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNN 607
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/270 (21%), Positives = 108/270 (40%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L C E+ A + ++ + PN T N ++ G + G++ EM
Sbjct: 455 YTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMD 514
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L GF P +TY +D YCK G A L M P+L T L++G + +
Sbjct: 515 LAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLE 574
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L + M ++ + P+ +N+++ ++ A E+ M ++ + D+ TY+ +
Sbjct: 575 DGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILI 634
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ ++ L+ M+E + T L++ F + L+ + G
Sbjct: 635 KGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLV 694
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
D+ V G WE E + +
Sbjct: 695 AEKDIYDIFVDVNYEEGNWEITLELCDEFM 724
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 77/182 (42%), Gaps = 1/182 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ FC +++ + +L + PN T N L+ + ++ A Y M
Sbjct: 560 FNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMH 619
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P TYNI I G+CK +A L +EM + T LI G +
Sbjct: 620 DRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFV 679
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LF+EM K L + Y+ + + +EL DE + G V Y F
Sbjct: 680 EARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFF 739
Query: 360 FG 361
G
Sbjct: 740 IG 741
>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Glycine max]
Length = 583
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/400 (26%), Positives = 178/400 (44%), Gaps = 27/400 (6%)
Query: 56 QHLPQTTP-LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILA 114
QH + P +T L +LF A + L FF+++ + + + K LH+LA
Sbjct: 30 QHWSELKPHFRTTKPAIFLDQLFNAGVDSELVLRFFQWSQKEFRISYGLETTGKVLHLLA 89
Query: 115 RMRYFDQAWELMSHVQRTH-----------------PSLLTLKSMSIMLSRISKFQSYEE 157
+ + + + + + P L + ++L+ ++ + +
Sbjct: 90 NSKKYSKVRSFLDKLVKNEKHTVSSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIH-S 148
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMN 216
E F R++ F K N LL A E E + V+ +++ R PN T N
Sbjct: 149 ACEVFRRVQDYGF----KLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR---LFEEM 273
I + G ++G + E ++ GF P++VTYN IDG+CKKG G R + +EM
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEM 264
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P+ T TLI G N+ A+ F+EM ++ LKP+I YN++I+ L L
Sbjct: 265 LANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKL 324
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A+ L D+M + + VT++ + G K ++ KL+D + E VP T +
Sbjct: 325 DEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTM 384
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
+ FC ++ G L ++D G P+ + L+ GLC
Sbjct: 385 IDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLC 424
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 171/374 (45%), Gaps = 22/374 (5%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLL 185
+R P+L T L + K E+ +E I+ +G +N L+
Sbjct: 194 RRIQPNLTTFNIFINGLCKAGKLNKAEDVIE-----------DIKAWGFSPNIVTYNTLI 242
Query: 186 QAFC---TQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
C + +M A ++ ++L+ + PN T N L+ GF + +V A + + EM +
Sbjct: 243 DGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQ 302
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +P++VTYN I+G G +A+ L+++M + P++ T LI+G + I +A
Sbjct: 303 GLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEA 362
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
R+LFD++ +++L P+ +N MI + + + L + M ++ I + TY+ + G
Sbjct: 363 RKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAG 422
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L ++ + KL + M + T +L+ +C + L G +++ G P+
Sbjct: 423 LCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPN 482
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ L+ G C G + A + QM ++ + +Y +L + + KLED +R
Sbjct: 483 HVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTG---KLEDANR 539
Query: 482 MIKNLQAVLPPPTR 495
++ + P R
Sbjct: 540 LLNEMLEKGLNPNR 553
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 135/285 (47%), Gaps = 1/285 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC + + A++ F ++ + PN T N L+ G +G + + +MV
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P++VT+N I+G+CKK +A +LF+++ +P+ T T+I +
Sbjct: 336 GLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMME 395
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L + M + P++ YN +I+ L R +++ AA +L++EME + D VTY+ +
Sbjct: 396 EGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILI 455
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K KL M+ P T LM +C+ + L + + G
Sbjct: 456 GGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKR 515
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ ++L+ G C G+ E+A +ML + + +Y +++
Sbjct: 516 ANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVR 560
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 13/292 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F D F K ++LA F++ Q P+++T S+ LS K +E
Sbjct: 276 FNTLIDGFCKDENVLAAKNAFEEM-----QRQGLKPNIVTYNSLINGLSNNGKL---DEA 327
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ +D+M + +G++ FN L+ FC +K +KEAR +F + + PN T N
Sbjct: 328 IALWDKM---VGLGLKP-NIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ F ++G + ++ M+ G P+V TYN I G C+ A +L EME
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T LI G +A +L EM +KP+ YN ++ +L AA+
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ +ME++ + VTY+ + G K+ LE +L + M+E P T
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTT 555
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 129/292 (44%), Gaps = 13/292 (4%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WELMS 127
N L F N L A F+ +Q P + ++ L+ D+A W+ M
Sbjct: 277 NTLIDGFCKDENVLAAKNAFE-EMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMV 335
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
+ P+++T ++ ++ K + +E + FD + + V + FN ++ A
Sbjct: 336 GLG-LKPNIVTFNAL---INGFCKKKMIKEARKLFDDIAEQDLVP----NAITFNTMIDA 387
Query: 188 FCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
FC M+E ++ +L PN T N L+ G + +V A + +EM +
Sbjct: 388 FCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKAD 447
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VVTYNI I G+CK G A +L EM V P+ T TL+ G + N+ A ++
Sbjct: 448 VVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRT 507
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+M K + ++ YN +I + L A L++EM EK + + TY +
Sbjct: 508 QMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559
>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
Length = 816
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/418 (27%), Positives = 176/418 (42%), Gaps = 26/418 (6%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H TP+ A+ +H L FD A EL + + R PS +T ++M+ K
Sbjct: 349 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY---NVMIDASCK 405
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-- 209
EE + +M + V +N ++ C ++EA +F ++ R
Sbjct: 406 RGMLEEACDLIKKMIEDGHVP----DVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLGCT 460
Query: 210 PNNKTMNILLLGFKESGDVTAM-------EMF--YHEMVLRGFRPSVVTYNIRIDGYCKK 260
PN ++ N ++LG + + E F M G P VVTY+ I G C
Sbjct: 461 PNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 520
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
DA L E+M + C P++ T TLIHG I +AR++ D M PD+ Y
Sbjct: 521 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 580
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N ++ R A EL+ +M + + + VTY + GL K++ L C ++ +M
Sbjct: 581 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 640
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T L+ FC +VD GL L+G ++ G P L LC GR
Sbjct: 641 SGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSAR 700
Query: 441 AFECSKQM--LVRRRQVSEASYRMLQRYLVQANANE-KLEDLDRMIKNLQAVLPPPTR 495
A E ++ +R + YR L++A E L + M++ Q LP P R
Sbjct: 701 ALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ--LPAPER 756
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/309 (25%), Positives = 135/309 (43%), Gaps = 10/309 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + EA +F K+ R +P++ + IL+ G ++G + + +++
Sbjct: 291 YNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLL 350
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G PS V Y I G C F DA LF +M R C PS T +I + +
Sbjct: 351 HSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLE 410
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M + PD+ YN ++ L + + A+ L +EME + +++T+
Sbjct: 411 EACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTII 470
Query: 360 FGLMKSSGLEGVC---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
GL + S ++ C +L RM + VP T L+ C RVD +L
Sbjct: 471 LGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLL 530
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
++ R P + L+ GLC GR +EA E M+ + +Y L +A
Sbjct: 531 EDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRA 590
Query: 471 NANEKLEDL 479
E+ +L
Sbjct: 591 GQTERAREL 599
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 121/541 (22%), Positives = 212/541 (39%), Gaps = 74/541 (13%)
Query: 13 FPGISDRLALLFSTTTQSSEIERITRIINDHP-FPDQPLHPTLLQHLPQTTPLSST--LV 69
+P + + L S ++ ++++ +++ D FPD T+L L + + ++
Sbjct: 43 YPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVM 102
Query: 70 ENVLGRL---------FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ + R+ F AH L+ F L A+ + L + D
Sbjct: 103 DEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVD 162
Query: 121 QAWELM-SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
A EL + ++ P L S+ +L + +E L+ + RE +
Sbjct: 163 DALELARTMSEKRIP--LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCL-------V 213
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN-------------------------- 212
NVLL+ FC++ ++ +AR + + AP+
Sbjct: 214 TLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDR 273
Query: 213 ---------------KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ NI++LG ++ + + +M R P +Y I IDG
Sbjct: 274 ELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGL 333
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
K G DA LF+++ PS T+LIHG + + AR+LF +M +R P
Sbjct: 334 AKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSP 393
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN MI + + L A +L+ +M E D VTY+T+ GL KSS +E L++
Sbjct: 394 VTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNE 453
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN---------LWGYLIDRGFCPHGHALDLL 428
M P R+ ++ C ++D L + D G P L
Sbjct: 454 MERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRMTDDGHVPDVVTYSTL 513
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKNLQ 487
++GLCS R ++A + M+ R+ + + + L L +A E E LD M+ + Q
Sbjct: 514 ISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQ 573
Query: 488 A 488
+
Sbjct: 574 S 574
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 116/261 (44%), Gaps = 7/261 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
F ++Q +C EA +F + +P N+L+ + + A++ MV
Sbjct: 13 FTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVD 72
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P T+ + G CK G +A + +EM P T + L H L ++ +
Sbjct: 73 RGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMER 132
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A QL + MP N AYN ++ +L + ++ A+EL M EKRI + ++
Sbjct: 133 AFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLV 188
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GLM S ++ ++Y E + P T+ +L++ FC +VD L + D P
Sbjct: 189 GLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAP 245
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ ++ GLC GR EEA
Sbjct: 246 DEVSYCTVLDGLCKAGRVEEA 266
>gi|240255563|ref|NP_190542.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546755|sp|P0C8A0.1|PP275_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g49730
gi|332645062|gb|AEE78583.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 638
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 114/471 (24%), Positives = 201/471 (42%), Gaps = 26/471 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+ E+E+I RI+ +H P L L ++ L L+ VL R A + G +
Sbjct: 64 AGEVEKIYRILRNH----HSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYR--- 116
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + + + IL++MR F W L+ +++T+P L+ + +++ R
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ ++ +E D M K+G E F LL A C +KEA VF +
Sbjct: 177 FASANMVKKAVEVLDEMP--------KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+F PN + LL G+ G + + +M G P +V + + GY G
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L +M + P++ T LI + + +A ++F EM + + DI Y A+
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS + ++ ++D+M +K + VTY + K E +L ++M
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P ++++ C V + LW + G P +++ G S+G EA
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
K+M V R S Y L+ L ++KLE M K++ + + T
Sbjct: 469 HFKEM-VSRGIFSAPQYGTLKSLLNNLVRDDKLE----MAKDVWSCISNKT 514
>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
Length = 716
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 139/284 (48%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++ AR FV++ + P+ T N L+ G+ ++G++ + ++
Sbjct: 340 YNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLK 399
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G PSV+TYNI +DGYC+ G +A R +EM C P + T T L++G+ VRN+
Sbjct: 400 RAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLA 459
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
R+ FDEM + L+PD AYN IS+ + + A +L + M + I D VTY+
Sbjct: 460 MVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFL 519
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS L+ L+ +M+ P T L+ C R+ +++ ++ G
Sbjct: 520 DGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLP 579
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + + C RG A+ ++ML + +E +Y +L
Sbjct: 580 PSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVL 623
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 12/318 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P L+T S+ ++ K + +E L F ++R G+ +N+LL +C +
Sbjct: 370 PDLITYNSL---INGYCKAGNLKEALWLFGDLKR---AGLAP-SVLTYNILLDGYCRLGD 422
Query: 194 MKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
++EAR +++ + P+ T IL+ G ++ ++ + F+ EM+ +G +P YN
Sbjct: 423 LEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR--NIHQARQLFDEMPK 310
RI G +A +L E M ++ S T+T I GL + N+ A L+ +M
Sbjct: 483 RISAELILGSTSEAFQLTEVM--ISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVS 540
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
L+PD Y +I + L A ++ D M + VTY + L
Sbjct: 541 DGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYS 600
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+ +M+E P T +L+ C R +L + +++RG P+ + LL+
Sbjct: 601 AYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLID 660
Query: 431 GLCSRGRWEEAFECSKQM 448
G C G WEEA +M
Sbjct: 661 GNCKEGNWEEAIRLYSEM 678
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 121/272 (44%), Gaps = 9/272 (3%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P K N++L ++ M Y EM+ G PS+VTYN +D + ++G A +L
Sbjct: 194 PFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREGRVDQAAKL 253
Query: 270 FEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
EME CLPS T +I+G + +A QL D M + + K +N +I+
Sbjct: 254 LREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGY 312
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ A L EME + I VTY+T+ G+ +S +E + M +P
Sbjct: 313 FARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDL 372
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ +C + L L+G L G P ++L+ G C G EEA ++
Sbjct: 373 ITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQE 432
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
M+ + Q ++Y +L N + K+ +L
Sbjct: 433 MVEQGCQPDVSTYTILM------NGSRKVRNL 458
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 96/218 (44%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + A EA + ++SR + + T NI L G +SG++ + + +MV
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +TY I +C++G +A +F+ M PS T T IH N++
Sbjct: 540 SDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLY 599
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A F +M + ++P+ YN +I +L R N A + EM E+ + + TY +
Sbjct: 600 SAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLI 659
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
G K E +LY M + P T L K F
Sbjct: 660 DGNCKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGF 697
>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
Length = 924
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 156/329 (47%), Gaps = 11/329 (3%)
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL----SRFAPNNKTMNILLLGFKESG 226
VG R G +N LL+ C ++ +EAR + ++ S +P+ + NI++ GF G
Sbjct: 149 VGCR-LGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEG 207
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
V + EM G P VVTYN IDG CK A +F++M P+ T
Sbjct: 208 QVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYN 264
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
T+I G + + A +F +M + +KP YN +I L + + ++ A + +M ++
Sbjct: 265 TIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDR 324
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ D+VTY+T+ GL K+ ++ ++ +MI+ P T +++ C VD
Sbjct: 325 GVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRA 384
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
++ +ID+G P+ + L+ G S G+WEE + K+M + +Y +L Y
Sbjct: 385 EGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444
Query: 467 LVQ-ANANEKLEDLDRMIKNLQAVLPPPT 494
L + NE D MI+ + + P T
Sbjct: 445 LCKNGKCNEARSLFDSMIR--KGIKPSVT 471
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 124/261 (47%), Gaps = 1/261 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C +E+ A VF +++ + PNN T N ++ G ++ +V E + +MV
Sbjct: 228 YNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMV 287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +PS VTYN IDG CK A +F++M P T T+I G + I
Sbjct: 288 DKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAID 347
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F +M + +KPD Y +I L + + ++ A + +M +K + +N TY+ +
Sbjct: 348 KAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLI 407
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + + E V + M P T +L+ + C N + + +L+ +I +G
Sbjct: 408 HGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIK 467
Query: 420 PHGHALDLLVTGLCSRGRWEE 440
P +++ G +G E
Sbjct: 468 PSVTIYGIMLHGYGKKGALSE 488
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/324 (23%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ ++L + K E FD M R+ GI+ + ++L + + + E +
Sbjct: 437 TYGLLLDYLCKNGKCNEARSLFDSMIRK---GIKP-SVTIYGIMLHGYGKKGALSEMHDL 492
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++ +PN++ N ++ + + + + + +M +G P+VVTY ID CK
Sbjct: 493 LNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCK 552
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G DA+ F +M P+ +L++G V + +LF EM + ++PDI
Sbjct: 553 LGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVF 612
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+N ++ +L + + A L+D M + D ++Y+T+ G +S ++ KL D M+
Sbjct: 613 FNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P + L+ +C R+D L+ ++ +G P + ++ GL GR+
Sbjct: 673 SAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFS 732
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
EA E M+ R+ S +Y ++
Sbjct: 733 EARELYVNMIKSRKLWSICTYSII 756
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 83/383 (21%), Positives = 160/383 (41%), Gaps = 10/383 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+P + + L + + D+A ++ + + P+ +T ++ + + K Q +
Sbjct: 222 SPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTI---IDGLCKAQEVDM 278
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
F +M + G++ + +N ++ C + + A VF +++ R P++ T N
Sbjct: 279 AEGVFQKM---VDKGVKP-SNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYN 334
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G ++ + E + +M+ +G +P +TY I IDG CK A +F++M
Sbjct: 335 TIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDK 394
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P+ T LIHG + Q EM +L+PD+ Y ++ L + N A
Sbjct: 395 GVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEA 454
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L D M K I Y M G K L + L + M+ P R ++
Sbjct: 455 RSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICA 514
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+ +D ++++ + +G P+ L+ LC GR ++A QM+ +
Sbjct: 515 YAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPN 574
Query: 457 EASYRMLQRYLVQANANEKLEDL 479
+ L L + EK+E+L
Sbjct: 575 NVVFNSLVYGLCTVDKWEKVEEL 597
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 135/300 (45%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A C + +A F ++++ PNN N L+ G +E + EM+
Sbjct: 543 YGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEML 602
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G RP +V +N + CK+G +A RL + M + P + + TLI G +
Sbjct: 603 NQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMD 662
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L D M LKP+I +YN ++ + ++ A L EM K + TY+T+
Sbjct: 663 EAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTIL 722
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL +S +LY MI+ + + T +++ FC N D ++ L
Sbjct: 723 NGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQ 782
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++++ GL GR E+A + + S +YR++ L++ + E+L+ L
Sbjct: 783 LDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCL 842
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/354 (22%), Positives = 167/354 (47%), Gaps = 10/354 (2%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCT 190
H ++++++ +LS +S+ + + A R R + K + +++++ FC
Sbjct: 37 HARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPDCCTYSIVIGCFCR 96
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVV 248
++ + F +L + + ++ +N LL G ++ V AM + +M G R VV
Sbjct: 97 IGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVV 156
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEM---ERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+YN + G C + +A L M + +C P + + +I+G + +A LF
Sbjct: 157 SYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF 216
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
EM + PD+ YN +I L + ++++ A ++ +M EK + +NVTY+T+ GL K+
Sbjct: 217 LEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ ++ +M++ P T ++ C VD ++ +IDRG P
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ GLC ++A +QM+ + + +Y ++ L +A + ++ E +
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGV 387
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 78/387 (20%), Positives = 165/387 (42%), Gaps = 11/387 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ + + L + + D+A + + + P +T ++ + + K Q+ ++
Sbjct: 293 PSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTI---IDGLCKAQAIDKA 349
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
F +M I G++ + + +++ C + + A VF +++ + PNN T N
Sbjct: 350 EGVFQQM---IDKGVKP-DNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNC 405
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +G + EM P V TY + +D CK G +A LF+ M R
Sbjct: 406 LIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKG 465
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
PS+ ++HG G + + L + M + P+ +N +I + + ++ M
Sbjct: 466 IKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVM 525
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ +M+++ + + VTY T+ L K ++ +++MI P L+
Sbjct: 526 HIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGL 585
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + + L+ ++++G P + ++ LC GR EA M+ +
Sbjct: 586 CTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDV 645
Query: 458 ASYR-MLQRYLVQANANEKLEDLDRMI 483
SY ++ + + +E ++ LD M+
Sbjct: 646 ISYNTLIDGHCFASRMDEAVKLLDGMV 672
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/381 (20%), Positives = 150/381 (39%), Gaps = 45/381 (11%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
+P F + A+ D+ + + Q P+++T ++ + + K +
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTL---IDALCKLGRVD 557
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ + F++M E G+ + FN L+ CT + ++ +F+++L++ P+
Sbjct: 558 DAVLQFNQMINE---GVTP-NNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFF 613
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N +L + G V MV G +P V++YN IDG+C +A++L + M
Sbjct: 614 NTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVS 673
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ + TL+HG I A LF EM ++ + P + YN +++ L R +
Sbjct: 674 AGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSE 733
Query: 336 AMELMDEMEEKR-----------------------------------IGHDNVTYHTMFF 360
A EL M + R + D +T++ M
Sbjct: 734 ARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMID 793
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K E L+ + VP T ++ + ++ L+ + G P
Sbjct: 794 GLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAP 853
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ H L+ L+ L RG A
Sbjct: 854 NSHMLNALIRKLLDRGEIPRA 874
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 81/202 (40%), Gaps = 36/202 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL +C + A +F ++L + P +T N +L G SG + Y M+
Sbjct: 683 YNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMI 742
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
S+ TY+I +DG+CK CF +A ++F+ + + + T +I G
Sbjct: 743 KSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKE 802
Query: 292 -----------AGLVRNIHQAR----------------QLFDEMPKRNLKPDIGAYNAMI 324
GLV ++ R LF M K P+ NA+I
Sbjct: 803 DAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALI 862
Query: 325 SSLIRCRDLNAAMELMDEMEEK 346
L+ ++ A + +++EK
Sbjct: 863 RKLLDRGEIPRAGAYLSKLDEK 884
>gi|357509511|ref|XP_003625044.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355500059|gb|AES81262.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 521
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 99/404 (24%), Positives = 190/404 (47%), Gaps = 17/404 (4%)
Query: 62 TPLSSTL----VENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMR 117
TP S TL ++++L +L ++ + +L+FF + H + T LHIL + R
Sbjct: 60 TPFSKTLTPFKIQHILLKL---QNDAVLSLKFFNWVQTHNPNSHTLHTHSFLLHILTKNR 116
Query: 118 YFDQAWELMSHVQRTHPSLLT--LKSMSIMLSRISKFQSYEETLEAFDRMER--EIFVGI 173
F A + S + T+ +L L S ++ S F + +T +++ + FV +
Sbjct: 117 NFKTAQSIFSKIITTNSNLFESLLHSYTLCNSSPLVFDTLFKTFAHMNKLRNATDTFVKM 176
Query: 174 RKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDV 228
+++G E N L + K + S + ++ +R +PN T+N+++ + + G++
Sbjct: 177 KEYGFFPTVESCNAFLSSMLYLKRPELVVSFYRQMRRNRISPNVYTINMVVSAYCKLGEL 236
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE-EMERVACLPSLQTITT 287
+M G P+VVT+N I GYC KG G A+++ + M + P++ T T
Sbjct: 237 NKASEVLEKMKDMGLCPNVVTFNSLISGYCDKGLLGLALKVRDLMMGKNGVFPNVVTFNT 296
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI+G +H+A ++F EM N+ P++ YN +I+ + + + L +EME +
Sbjct: 297 LINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEMERNK 356
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D +TY+ + GL K + + + +G VP T L+ CV +
Sbjct: 357 VKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSERAF 416
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++ ++ GF P+ + +L + C ++ A + + ML R
Sbjct: 417 LVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLER 460
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 88/204 (43%), Gaps = 36/204 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC + ++ EA VF ++ L+ APN T N L+ GF ++G+ + EM
Sbjct: 294 FNTLINGFCKEGKLHEANRVFSEMKLANVAPNVVTYNTLINGFGQAGNSEMGIGLFEEME 353
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ ++TYN I G CK+G A + +E+++ +P+ T + LI G + N
Sbjct: 354 RNKVKADILTYNGLILGLCKEGKTKKAAYMVKELDKGNLVPNASTFSALIAGQCVRNNSE 413
Query: 300 QA-----------------------------------RQLFDEMPKRNLKPDIGAYNAMI 324
+A Q+ +M +R + PD + +
Sbjct: 414 RAFLVYRSMVRSGFSPNENTFRMLASAFCKNEDFDGAVQVLRDMLERFMTPDSSILSEVY 473
Query: 325 SSLIRCRDLNAAMELMDEMEEKRI 348
S L RC A+ L E+E KR+
Sbjct: 474 SGLCRCGRKQFALMLCSEIEAKRL 497
>gi|225425882|ref|XP_002266563.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial [Vitis vinifera]
Length = 496
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 106/464 (22%), Positives = 213/464 (45%), Gaps = 20/464 (4%)
Query: 31 SEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFF 90
S+I+ I I + D+ + P+S LV+ +L R + AL F
Sbjct: 43 SQIDIIVSRIREGSSDDEVFKSLVHDEACNAIPMSQNLVDVLLHRF---KDDWKSALGLF 99
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
++ + P+A++ + IL +++ D+ LM +++ + L+ L +++ + R++
Sbjct: 100 RWAESRLGYEHAPEAYDMMVDILGKLKQVDKMRALMEEMRQGN--LVRLSTVAKAMRRLA 157
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP 210
+E+ + FD + + K +E N+LL C ++++++AR++F++L +P
Sbjct: 158 GAGEWEDAVRVFDDLGN---FELEK-NTESMNLLLDTLCKERKVEQARAIFLELKPHISP 213
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T NI + G+ ++ V E EM G RP V++Y+ I YC++ F L
Sbjct: 214 NTHTFNIFIHGWCKANRVDEAEWTIQEMKGHGCRPCVISYSTIIQSYCRQSNFRKVYELL 273
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
++M+ C P++ T TT++ V +A Q+ + M KPD YNA+I +L R
Sbjct: 274 DDMQAQGCAPNVVTYTTIMCSLTKVEQFEEALQIAERMRSVGCKPDTLFYNALIHTLGRA 333
Query: 331 RDLNAAMELMD-EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTR 388
L A+ + + EM + + + TY++M S + L + F P +
Sbjct: 334 GQLREAVRVFEVEMPKTGVPPNTSTYNSMIAMFCHHSQEQKALNLLREIENSTFCKPDIQ 393
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD-----LLVTGLCSRGRWEEAFE 443
T ++K ++D N ++++ H +LD LL+ GLC + E +
Sbjct: 394 TYYPVLKSCFKTGKIDSLSNFLDDMVNK----HHLSLDVSAYTLLIHGLCRANKCEWGYN 449
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
++M+ + + +L + Q N ++ E ++ +K ++
Sbjct: 450 LFEEMVGKAITPRYKTCALLLDEIKQKNMHDAAERIEVFMKQMK 493
>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Vitis vinifera]
Length = 609
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 216/492 (43%), Gaps = 40/492 (8%)
Query: 10 SDKFPGISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLL--QHLPQ-TTPLSS 66
S +FP + +L +T T S N H F D P L+ QH + T +
Sbjct: 15 STRFPSLDPKLN---NTKTPFSSPNSTYTTPNSHTF-DTPTISQLIAKQHWSKLKTIVKE 70
Query: 67 TLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
T ++L LF + + L +FK+T + + F + LH+LA + +++ L+
Sbjct: 71 TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALL 130
Query: 127 -SHVQRTHPSLLTL-KSMSIMLS--------------RISKFQSYEETLEAFDRMEREIF 170
S + H S T+ S+S++ S K + LE FDR F
Sbjct: 131 DSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGF 190
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG------FK 223
+ + N +L + + + SV+ +++ R N T ++++ G F+
Sbjct: 191 ----RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
++GDV +M GF PSV+TYN IDGYCK G A L +EM P+
Sbjct: 247 KAGDVV------EDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T LI G N+ A+++F+EM ++ L+P++ YN++I+ L L+ A+ L D+M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+ + VTY+ + G K L+ ++ D + + P T L+ + R+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D L ++D G CP+ + L+ G C G +EA + +K+M + +Y +L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480
Query: 464 QRYLVQANANEK 475
L + K
Sbjct: 481 VDALCKKGETRK 492
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/325 (25%), Positives = 151/325 (46%), Gaps = 36/325 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +C +M +A ++ ++++ R PN T NIL+ GF +VTA + + EM
Sbjct: 267 YNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQ 326
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P+VVTYN I+G C G +A+ L ++M + P++ T LI+G + +
Sbjct: 327 RQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLK 386
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISS-----------LIR------------------- 329
+AR++ D++ KR L P++ +N +I + L+R
Sbjct: 387 EAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLI 446
Query: 330 ---CRDLNA--AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
CR+ N A +L EME + D VTY+ + L K +L D M E
Sbjct: 447 VGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLN 506
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ + LN+ + +G + ++L+ G C++G+ EEA
Sbjct: 507 PSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 566
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQ 469
+ML + + +Y +L+ +++
Sbjct: 567 LNEMLEKGLIPNRTTYDILRDEMME 591
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 136/302 (45%), Gaps = 16/302 (5%)
Query: 96 HPH---FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
HP+ F D F + ++ A + F++ Q P+++T S+ L K
Sbjct: 296 HPNEITFNILIDGFCRDENVTAAKKVFEEM-----QRQGLQPNVVTYNSLINGLCSNGKL 350
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
+E L D+M +G++ +N L+ FC +K +KEAR + + R APN
Sbjct: 351 ---DEALGLQDKMSG---MGLKP-NVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N L+ + ++G + + M+ G P+V TYN I G+C++G +A +L +
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EME L T L+ +A +L DEM + L P YNA+I R
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ AA+ + ME+K + VTY+ + G LE +L + M+E +P T
Sbjct: 524 NSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583
Query: 392 ML 393
+L
Sbjct: 584 IL 585
>gi|6723418|emb|CAB66911.1| putative protein [Arabidopsis thaliana]
Length = 1184
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/454 (24%), Positives = 194/454 (42%), Gaps = 22/454 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+ E+E+I RI+ +H P L L ++ L L+ VL R A + G +
Sbjct: 64 AGEVEKIYRILRNH----HSRVPKLELALNESGIDLRPGLIIRVLSRCGDAGNLGYR--- 116
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + + + IL++MR F W L+ +++T+P L+ + +++ R
Sbjct: 117 FFLWATKQPGYFHSYEVCKSMVMILSKMRQFGAVWGLIEEMRKTNPELIEPELFVVLMRR 176
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ ++ +E D M K+G E F LL A C +KEA VF +
Sbjct: 177 FASANMVKKAVEVLDEMP--------KYGLEPDEYVFGCLLDALCKNGSVKEASKVFEDM 228
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+F PN + LL G+ G + + +M G P +V + + GY G
Sbjct: 229 REKFPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 288
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L +M + P++ T LI + + +A ++F EM + + DI Y A+
Sbjct: 289 DAYDLMNDMRKRGFEPNVNCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 348
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS + ++ ++D+M +K + VTY + K E +L ++M
Sbjct: 349 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQIMVAHEKKEQFEECLELIEKMKRRGC 408
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P ++++ C V + LW + G P +++ G S+G EA
Sbjct: 409 HPDLLIYNVVIRLACKLGEVKEAVRLWNEMEANGLSPGVDTFVIMINGFTSQGFLIEACN 468
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
K+M V R S Y L+ L ++KLE
Sbjct: 469 HFKEM-VSRGIFSAPQYGTLKSLLNNLVRDDKLE 501
>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
Length = 577
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 126/492 (25%), Positives = 216/492 (43%), Gaps = 40/492 (8%)
Query: 10 SDKFPGISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLL--QHLPQ-TTPLSS 66
S +FP + +L +T T S N H F D P L+ QH + T +
Sbjct: 15 STRFPSLDPKLN---NTKTPFSSPNSTYTTPNSHTF-DTPTISQLIAKQHWSKLKTIVKE 70
Query: 67 TLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
T ++L LF + + L +FK+T + + F + LH+LA + +++ L+
Sbjct: 71 TNPSSLLQHLFNSEAQPDLILCYFKWTQKEFGAIHNVEQFCRLLHLLANAKNYNKIRALL 130
Query: 127 -SHVQRTHPSLLTL-KSMSIMLS--------------RISKFQSYEETLEAFDRMEREIF 170
S + H S T+ S+S++ S K + LE FDR F
Sbjct: 131 DSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGF 190
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG------FK 223
+ + N +L + + + SV+ +++ R N T ++++ G F+
Sbjct: 191 ----RLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQ 246
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
++GDV +M GF PSV+TYN IDGYCK G A L +EM P+
Sbjct: 247 KAGDVV------EDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEI 300
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T LI G N+ A+++F+EM ++ L+P++ YN++I+ L L+ A+ L D+M
Sbjct: 301 TFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKM 360
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+ + VTY+ + G K L+ ++ D + + P T L+ + R+
Sbjct: 361 SGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRM 420
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D L ++D G CP+ + L+ G C G +EA + +K+M + +Y +L
Sbjct: 421 DDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNIL 480
Query: 464 QRYLVQANANEK 475
L + K
Sbjct: 481 VDALCKKGETRK 492
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 120/260 (46%), Gaps = 4/260 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ FC + + A+ VF ++ + PN T N L+ G +G + +M
Sbjct: 302 FNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMS 361
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P+VVTYN I+G+CKK +A + +++ + P++ T TLI G +
Sbjct: 362 GMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMD 421
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L M + P++ YN +I R ++ A +L EME + D VTY+ +
Sbjct: 422 DAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILV 481
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV---MLMKFFCVNFRVDLGLNLWGYLIDR 416
L K +L D M + + +V +L+K FC +++ L ++++
Sbjct: 482 DALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEK 541
Query: 417 GFCPHGHALDLLVTGLCSRG 436
G P+ D+L + +G
Sbjct: 542 GLIPNRTTYDILRDEMMEKG 561
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 12/93 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--------PNNKTMNILLLGFKESGDVTAME 232
+N+L+ A C + E ++A V+LL N T N+L+ GF G +
Sbjct: 477 YNILVDALCKKGETRKA----VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEAN 532
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+EM+ +G P+ TY+I D +KG D
Sbjct: 533 RLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPD 565
>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 583
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 110/446 (24%), Positives = 191/446 (42%), Gaps = 27/446 (6%)
Query: 56 QHLPQTTP-LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILA 114
QH + P L T L +L A + L FFK++ + + + K LH LA
Sbjct: 30 QHWSELKPHLRVTKPATFLDQLLNAGVDSELVLRFFKWSQKEYRLSYGLEPTSKVLHFLA 89
Query: 115 RMRYFDQAWELMSHVQRTH-----------------PSLLTLKSMSIMLSRISKFQSYEE 157
+ + + + + P L ++L+ + + +
Sbjct: 90 NSKRYSKVRSFLDSFVKNEKHTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHC- 148
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
EAF R + F K N LL A + ++ + V+ +++ R N T N
Sbjct: 149 AYEAFTRAKDYGF----KLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFN 204
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD---AMRLFEEM 273
I + G +G + E +M G P+VVTYN +DGYCK+G G A +EM
Sbjct: 205 IFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM 264
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P+ T TLI G N+ A++ F+EM K+ LKP+I YN++I+ L L
Sbjct: 265 LANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKL 324
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A++L D+M + + VTY+ + G K ++ K++D + + + VP T +
Sbjct: 325 EEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTM 384
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +C ++ G +L ++D G P+ + L+ GLC + + A E +M +
Sbjct: 385 IDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGL 444
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL 479
+ +Y +L L + + + E L
Sbjct: 445 KGDVVTYNILIDGLCKNDKSRNAEKL 470
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 138/285 (48%), Gaps = 1/285 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC + + A+ F ++ + PN T N L+ G +G + + +MV
Sbjct: 276 FNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMV 335
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P++VTYN I+G+CKK +A ++F+++ + +P++ T T+I +
Sbjct: 336 GLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMME 395
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L M + P++ YN +I+ L R +DL AA EL++EME K + D VTY+ +
Sbjct: 396 EGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILI 455
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ KL + M P T LM +C+ ++ LN+ +
Sbjct: 456 DGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQ 515
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
P+ ++L+ G C + E A +ML + + +Y +++
Sbjct: 516 PNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVR 560
>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Brachypodium distachyon]
Length = 714
Score = 134 bits (338), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 143/296 (48%), Gaps = 1/296 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + A+ F ++ ++ P+ T N L+ G+ ++G++ + ++
Sbjct: 338 YNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLK 397
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNI IDGYC+ G A RL EEM CLP + T T L++G+ +VRN+
Sbjct: 398 RAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLA 457
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
R FDEM + L+PD AYN IS+ + + A +L +EM + I D VTY+ +
Sbjct: 458 MVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLI 517
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ L+ +M+ T L+ C R+ N++ ++ G
Sbjct: 518 DGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLS 577
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
P + + C RG A+ ++ML + +E +Y +L L + E
Sbjct: 578 PSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTES 633
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 111/242 (45%), Gaps = 3/242 (1%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP K N +L +++ M Y +M+ G PS+ TYN +D +CK G A+
Sbjct: 191 APFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVA 250
Query: 269 LFEEMERVA--CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
L ++ME A CLP+ T +I+G + +A QL D M + + K YN +I+
Sbjct: 251 LLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM-RLSKKASAFTYNPLITG 309
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L+ + A L+ EME + I VTY+T+ GL K+ E +D M +P
Sbjct: 310 LLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPD 369
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ +C + L L+G L G P ++L+ G C G E A +
Sbjct: 370 LITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKE 429
Query: 447 QM 448
+M
Sbjct: 430 EM 431
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 1/219 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C + + R F ++LS+ P+ N + G +T EM+
Sbjct: 443 YTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMM 502
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LRG VTYN+ IDG CK G DA L+ +M T T LIH +
Sbjct: 503 LRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLI 562
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +FD M L P + Y I + R +L A +M E+ + + VTY+ +
Sbjct: 563 EAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLM 622
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L + E + + M+E VP T +L+ C
Sbjct: 623 HALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSC 661
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%)
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+L + + T N+L+ G ++G + + + +MV G R VTY I +C++G
Sbjct: 502 MLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRL 561
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A +F+ M PS+ T T IH N++ A F +M + ++P+ YN +
Sbjct: 562 IEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVL 621
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ +L R +A + EM E+ + + TY + G K +LY M +
Sbjct: 622 MHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGI 681
Query: 384 VPKTRTVVMLMKFF 397
P T L K F
Sbjct: 682 HPDHCTHNALFKGF 695
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 5/132 (3%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
+ IF G+ G + + + +C + + A F K+L PN T N+L+
Sbjct: 565 KNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHA 624
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
G + +HEM+ RG P+ TY + IDG CK+G + A+RL+ EM + P
Sbjct: 625 LCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPD 684
Query: 282 LQTITTLIHGAG 293
T L G G
Sbjct: 685 HCTHNALFKGFG 696
>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g05670, mitochondrial-like [Cucumis sativus]
Length = 748
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 12/369 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLK 140
K E + +Q + TPD ++ + + +A +LM +Q P+ T
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S+ ++L +I K E+ L + M ++I + + L+ F ++ A
Sbjct: 333 SIILLLCKIGKSFEAEKVLR--EMMSQKIIPD-----NVVYTTLIHGFFKLGHVRTANKW 385
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F ++LS+ +P+ T L+ GF + G V + +HEM+ RG +P VTY ID YCK
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A L EM ++ P++ T LI G + A +L DEM K+ L+ ++
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN+M++ + + ++ A++LM EME I D +TY T+ + ++ KL M+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P T +LM FC+ ++ G L G+++++G P + L+ C R
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 440 EAFECSKQM 448
+ K+M
Sbjct: 626 TTTKIYKRM 634
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q F ++ E +++F +++SR P+ T L+ + ++G++ ++EMV
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P++VTY IDG CK G A L +EM + ++ ++++G NI
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA +L EM + PD Y +I + R D++ A +L+ EM ++ + VT++ +
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G LE +L M+E VP T LMK C+ ++ ++ + ++G
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + ++L+ G C +EA+ K+M+ + + SY L
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 189/412 (45%), Gaps = 19/412 (4%)
Query: 83 GLKALEF-FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
G+K +F + + ++ P P AF+ +L + + +A +L+ + ++ ++T+ S
Sbjct: 169 GVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLL-SYGLVVTVDS 227
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ LSRI+ + E +E M ++F GI + + +N+++ + C ++KEA
Sbjct: 228 CNAFLSRIA---NNSEGIE----MAIKVFCEYGI-SWNTTSYNIIIYSLCRLGKVKEAHR 279
Query: 200 VFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ +++ R + P+ + + ++ G+ G++ +M ++G +P+ TYN I C
Sbjct: 280 LLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLC 339
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G +A ++ EM +P TTLIHG + ++ A + FDEM + + PD
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYI 399
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + + L EM + + D VTY T+ K+ + L++ M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
++ P T L+ C + +D L + +G + + +V G+C G
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVL 490
E+A + K+M V +Y + +A +L D+D+ K LQ +L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTV------IDAYCRLGDIDKAHKLLQEML 565
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 2/319 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C + EA V +++S + P+N L+ GF + G V ++ EM+
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +TY I G+ + G + LF EM P T TTLI +
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L +EM + + P+I Y A+I L + +L+ A EL+DEM +K + + Y++M
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ K+ +E KL M P T ++ +C +D L ++DRG
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++L+ G C G E+ ML + +Y L + N+ +
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630
Query: 480 DRMIKNLQAVLPPPTRQQV 498
+ ++N Q V P +
Sbjct: 631 YKRMRN-QGVAPDSNTYNI 648
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 118/282 (41%), Gaps = 6/282 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
TP + + L + D A EL+ +++ L S M++ I K + E+ +
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS-MVNGICKAGNIEQAI 523
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+ ME GI + + ++ A+C ++ +A + ++L R P T N+L
Sbjct: 524 KLMKEME---VAGIDP-DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF G + + M+ +G P +TYN + +C + ++++ M
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T LI G RN+ +A L+ EM ++ P + +YNA+I + R A E
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARE 699
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
L +EM + D Y+ + +E L D IE
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 1/167 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ FC +++ + +L + P+ T N L+ + Y M
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P TYNI I G+CK +A L++EM +P++ + LI R
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFX 695
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+AR+LF+EM L D YN + D+ + L DE EK
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Brachypodium distachyon]
Length = 524
Score = 134 bits (338), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 111/434 (25%), Positives = 192/434 (44%), Gaps = 30/434 (6%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P P LHP LL LP PLS+T N++ R ++ALE
Sbjct: 82 PIPTASLHP-LLSSLPPAPAFVLFADIFRLRLPLSTTTF-NIMLRHLCTAGKPVRALELL 139
Query: 91 KFTLQHPHFTPTPDAFEKTLHI---LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLS 147
+ P+P+A I AR R E+M ++ + + ++S
Sbjct: 140 RQM-------PSPNAVTYNTVIAGFCARGR-VQAGIEIMREMRERGGIAPDKYTYATVIS 191
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
K E+ + FD M E G + + +N L+ +C Q ++ A +++ R
Sbjct: 192 GWCKVGKVEDATKVFDEMLTE---GKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDR 248
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+ T N+ + G EM +G P TYNI I+GYCK+G A
Sbjct: 249 GVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKA 308
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
M++FE M ++ T T+LIH + + + +LF++ +R ++PD+ YNA+I+S
Sbjct: 309 MKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINS 368
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
D++ A E+M EME+KRI D+VTY+T+ GL L+ L + M + P
Sbjct: 369 HCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPD 428
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ L+ + + + + + ++ +GF P + ++ GLC G+ +A + K
Sbjct: 429 LVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVK 488
Query: 447 QMLVRRRQVSEASY 460
+M+ +++Y
Sbjct: 489 EMVGNGITPDDSTY 502
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/307 (22%), Positives = 130/307 (42%), Gaps = 4/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N ++ FC + ++ + ++ R AP+ T ++ G+ + G V + EM
Sbjct: 150 YNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEM 209
Query: 239 VLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ G P+ V YN I GYC +G A+R EM ++ T +H +
Sbjct: 210 LTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGR 269
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+A L +EM ++ L PD YN +I+ + AM++ + M K I VTY +
Sbjct: 270 AAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTS 329
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L ++ +L++ + P L+ C +D + G + +
Sbjct: 330 LIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKR 389
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKL 476
P + L+ GLC GR +EA ++M R Q SY ++ Y ++ + + +
Sbjct: 390 ITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAV 449
Query: 477 EDLDRMI 483
+ D M+
Sbjct: 450 KVRDEMM 456
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 87/218 (39%), Gaps = 36/218 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ +C + + K+A +F ++ + T L+ G V + +++ V
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351
Query: 240 LRGFRPSV-----------------------------------VTYNIRIDGYCKKGCFG 264
RG RP + VTYN + G C G
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A L EEM + P L + TLI G + +I A ++ DEM + P + YNAMI
Sbjct: 412 EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L A +L+ EM I D+ TY ++ GL
Sbjct: 472 KGLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509
>gi|115463377|ref|NP_001055288.1| Os05g0355200 [Oryza sativa Japonica Group]
gi|55168028|gb|AAV43896.1| unknown protein [Oryza sativa Japonica Group]
gi|55168069|gb|AAV43937.1| unknown protein [Oryza sativa Japonica Group]
gi|113578839|dbj|BAF17202.1| Os05g0355200 [Oryza sativa Japonica Group]
Length = 632
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/429 (23%), Positives = 189/429 (44%), Gaps = 14/429 (3%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ----HPHFTPTPDAFEKTLHILARM 116
+ PLS TLV VL R AH + FF++ F T + K +HIL +
Sbjct: 178 SPPLSETLVLAVLDRFKHAHR---PSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKA 234
Query: 117 RYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
R F L+ + + L + + I + + + + F+ M F
Sbjct: 235 RQFQSMVALIQEMGKE--GALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGF----DD 288
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
G E FN LL A + +EA VF ++ R+AP+ ++ L+L + + ++ ++
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ G +P VV +N I+G + +A+++FE M+ P++ T T LI
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ A + F+EM +PD+ Y ++ + ++ L++EM +K D TY+
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 468
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLID 415
+ L + + ++Y +MI+ P T M+MK +F +G +W +
Sbjct: 469 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 528
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G CP ++ + + G GR EEA + ++M+ + + + Y +A +
Sbjct: 529 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDI 588
Query: 476 LEDLDRMIK 484
L +L + +K
Sbjct: 589 LYELAQKVK 597
>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 748
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/369 (26%), Positives = 172/369 (46%), Gaps = 12/369 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLK 140
K E + +Q + TPD ++ + + +A +LM +Q P+ T
Sbjct: 273 KVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYN 332
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S+ ++L +I K E+ L + M ++I + + L+ F ++ A
Sbjct: 333 SIILLLCKIGKSFEAEKVLR--EMMSQKIIPD-----NVVYTTLIHGFFKLGHVRTANKW 385
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F ++LS+ +P+ T L+ GF + G V + +HEM+ RG +P VTY ID YCK
Sbjct: 386 FDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCK 445
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A L EM ++ P++ T LI G + A +L DEM K+ L+ ++
Sbjct: 446 AGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCI 505
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN+M++ + + ++ A++LM EME I D +TY T+ + ++ KL M+
Sbjct: 506 YNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEML 565
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P T +LM FC+ ++ G L G+++++G P + L+ C R
Sbjct: 566 DRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMN 625
Query: 440 EAFECSKQM 448
+ K+M
Sbjct: 626 TTTKIYKRM 634
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 137/284 (48%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q F ++ E +++F +++SR P+ T L+ + ++G++ ++EMV
Sbjct: 401 YTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMV 460
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P++VTY IDG CK G A L +EM + ++ ++++G NI
Sbjct: 461 QMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIE 520
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA +L EM + PD Y +I + R D++ A +L+ EM ++ + VT++ +
Sbjct: 521 QAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLM 580
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G LE +L M+E VP T LMK C+ ++ ++ + ++G
Sbjct: 581 NGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVA 640
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + ++L+ G C +EA+ K+M+ + + SY L
Sbjct: 641 PDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNAL 684
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/412 (23%), Positives = 189/412 (45%), Gaps = 19/412 (4%)
Query: 83 GLKALEF-FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
G+K +F + + ++ P P AF+ +L + + +A +L+ + ++ ++T+ S
Sbjct: 169 GVKMTQFTHRLIYTYKYWGPNPIAFDIFFQVLVEIGHLSEARKLLDKLL-SYGLVVTVDS 227
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ LSRI+ + E +E M ++F GI + + +N+++ + C ++KEA
Sbjct: 228 CNAFLSRIA---NNSEGIE----MAIKVFCEYGI-SWNTTSYNIIIYSLCRLGKVKEAHR 279
Query: 200 VFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ +++ R + P+ + + ++ G+ G++ +M ++G +P+ TYN I C
Sbjct: 280 LLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLC 339
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G +A ++ EM +P TTLIHG + ++ A + FDEM + + PD
Sbjct: 340 KIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYI 399
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + + L EM + + D VTY T+ K+ + L++ M
Sbjct: 400 TYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEM 459
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
++ P T L+ C + +D L + +G + + +V G+C G
Sbjct: 460 VQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNI 519
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVL 490
E+A + K+M V +Y + +A +L D+D+ K LQ +L
Sbjct: 520 EQAIKLMKEMEVAGIDPDAITYTTV------IDAYCRLGDIDKAHKLLQEML 565
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 136/319 (42%), Gaps = 2/319 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C + EA V +++S + P+N L+ GF + G V ++ EM+
Sbjct: 331 YNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEML 390
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +TY I G+ + G + LF EM P T TTLI +
Sbjct: 391 SKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMV 450
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L +EM + + P+I Y A+I L + +L+ A EL+DEM +K + + Y++M
Sbjct: 451 NAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMV 510
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ K+ +E KL M P T ++ +C +D L ++DRG
Sbjct: 511 NGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQ 570
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++L+ G C G E+ ML + +Y L + N+ +
Sbjct: 571 PTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKI 630
Query: 480 DRMIKNLQAVLPPPTRQQV 498
+ ++N Q V P +
Sbjct: 631 YKRMRN-QGVAPDSNTYNI 648
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 119/282 (42%), Gaps = 6/282 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
TP + + L + D A EL+ +++ L S M++ I K + E+ +
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNS-MVNGICKAGNIEQAI 523
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+ ME GI + + ++ A+C ++ +A + ++L R P T N+L
Sbjct: 524 KLMKEME---VAGIDP-DAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVL 579
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF G + + M+ +G P +TYN + +C + ++++ M
Sbjct: 580 MNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGV 639
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T LI G RN+ +A L+ EM ++ P + +YNA+I + + + A E
Sbjct: 640 APDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARE 699
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
L +EM + D Y+ + +E L D IE
Sbjct: 700 LFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 1/167 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ FC +++ + +L + P+ T N L+ + Y M
Sbjct: 576 FNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMR 635
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P TYNI I G+CK +A L++EM +P++ + LI + I
Sbjct: 636 NQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKIL 695
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+AR+LF+EM L D YN + D+ + L DE EK
Sbjct: 696 EARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVEITLNLCDEAIEK 742
>gi|326513552|dbj|BAJ87795.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 538
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 92/327 (28%), Positives = 151/327 (46%), Gaps = 5/327 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + FD ++R+ G F ++ ++ A+C ++ A
Sbjct: 202 TVGTYTILVDGLSTAGDISKVESVFDEIKRKNVAGDVYF----YSAVINAYCRAGNVRRA 257
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN +T L+ GF + G + A EM +M LRG + + +N IDG
Sbjct: 258 SEVFDECVGNGIEPNERTYGALINGFCKIGQIEAAEMLLTDMQLRGVGHNQIIFNTMIDG 317
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+ G A+ + MER+ + T TL G V + A++L M + ++ +
Sbjct: 318 YCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMTENGVESN 377
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+Y +IS + D+ A L +ME K VTY+ M G +KS + +
Sbjct: 378 YVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGSIREAERFKK 437
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + VP T L+ CVN +VD+ L L+ + RG P+ A L++GL G
Sbjct: 438 EMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTALISGLAKEG 497
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
R EEAF+ ML + Y ML
Sbjct: 498 RSEEAFQFYDNMLAAGLTPDDTLYSML 524
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/328 (23%), Positives = 133/328 (40%), Gaps = 5/328 (1%)
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
A EL+ + P +T S S+++ K ++ D M R G+ K + +
Sbjct: 116 AAELLRKALASCPGCITPLSASVVVDGFCKAGRMDDARRLLDEMPRH---GV-KLNACCY 171
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL + QK V ++ S P T IL+ G +GD++ +E + E+
Sbjct: 172 NPLLDTYTRQKNDARVAEVLKEMESGGVEPTVGTYTILVDGLSTAGDISKVESVFDEIKR 231
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+ V Y+ I+ YC+ G A +F+E P+ +T LI+G + I
Sbjct: 232 KNVAGDVYFYSAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGALINGFCKIGQIEA 291
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L +M R + + +N MI R ++ A+E+ ME I D TY+T+
Sbjct: 292 AEMLLTDMQLRGVGHNQIIFNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLAC 351
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL + + +E KL M E + L+ + L+ + +G P
Sbjct: 352 GLCRVNRMEDAKKLLHIMTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRP 411
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
++++ G G EA K+M
Sbjct: 412 SVVTYNVMIDGYIKSGSIREAERFKKEM 439
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 103/226 (45%), Gaps = 12/226 (5%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSL--LTLKSMSIMLSRISKFQSYEETLEAFD 163
F + R D+A E+ + ++R L T +++ L R+++ + ++ L
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQLDVYTYNTLACGLCRVNRMEDAKKLLHIMT 370
Query: 164 RMEREI-FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLG 221
E +V + L+ + +M EAR +F + + + P+ T N+++ G
Sbjct: 371 ENGVESNYV--------SYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDG 422
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ +SG + E F EM +G P V TY + G+C G A+RLFEEM++ P+
Sbjct: 423 YIKSGSIREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPN 482
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ T LI G +A Q +D M L PD Y+ ++ SL
Sbjct: 483 VVAYTALISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSL 528
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 97/227 (42%), Gaps = 5/227 (2%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
FN ++ +C + +A ++V ++ + + T N L G + + H
Sbjct: 311 FNTMIDGYCRHGMVDKALEIKAVMERMGIQL--DVYTYNTLACGLCRVNRMEDAKKLLHI 368
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G + V+Y I + K+G +A RLF +ME PS+ T +I G +
Sbjct: 369 MTENGVESNYVSYTTLISIHSKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKSGS 428
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I +A + EM K+ L PD+ Y A++ ++ A+ L +EM+++ + V Y
Sbjct: 429 IREAERFKKEMEKKGLVPDVYTYAALVHGHCVNGKVDVALRLFEEMKQRGAKPNVVAYTA 488
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+ GL K E + YD M+ P ML+ + R D
Sbjct: 489 LISGLAKEGRSEEAFQFYDNMLAAGLTPDDTLYSMLVGSLHTDKRKD 535
>gi|356547370|ref|XP_003542086.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g65820-like [Glycine max]
Length = 628
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 109/428 (25%), Positives = 186/428 (43%), Gaps = 22/428 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+S++E++ RI+ + L L + P L E VL R A G A F
Sbjct: 63 ASDVEKVYRILRKYHSRVPKLELALRESGVVVRP---GLTERVLNRCGDA---GNLAYRF 116
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
+ + + DA++ + +L+RMR F W L+ +++ +P L+T + I++ R
Sbjct: 117 YSWASKQSGHRLDHDAYKAMIKVLSRMRQFGAVWALIEEMRQENPHLITPQVFVILMRRF 176
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLL 205
+ + + ++ D M +G E F LL A +KEA S+F +L
Sbjct: 177 ASARMVHKAVQVLDEMP--------NYGCEPDEYVFGCLLDALRKNGSVKEAASLFEELR 228
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
R+ P+ K LL G+ + G + + +M G P +V YN + GY + GD
Sbjct: 229 YRWKPSVKHFTSLLYGWCKEGKLMEAKHVLVQMKDAGIEPDIVVYNNLLGGYAQADKMGD 288
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L +EM R C P+ + T LI + +A ++F EM + + D+ Y+ +IS
Sbjct: 289 AYDLLKEMRRKGCEPNATSYTVLIQSLCKHERLEEATRVFVEMQRNGCQADLVTYSTLIS 348
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + EL+DEM ++ GH + V Y + K LE +L + M +
Sbjct: 349 GFCKWGKIKRGYELLDEMIQQ--GHFPNQVIYQHIMVAHEKKEELEECKELVNEMQKIGC 406
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P +++ C V G+ LW + G P +++ G +G EA E
Sbjct: 407 APDLSIYNTVIRLACKLGEVKEGVRLWNEMESSGLSPSIDTFVIMINGFLEQGCLVEACE 466
Query: 444 CSKQMLVR 451
K+M+ R
Sbjct: 467 YFKEMVGR 474
>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
Length = 497
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 102/398 (25%), Positives = 169/398 (42%), Gaps = 16/398 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
P + + L + D+A EL H++ PS++T ++ L R K +
Sbjct: 8 PNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMAL 67
Query: 159 L-EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI 217
E DR ++ FN+L+ C +++ A F K+ R +PN T ++
Sbjct: 68 FQEMLDRRSHDVI---------SFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSV 118
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G ++ V+ M RG P V+TY I +DG CK+ A + EM
Sbjct: 119 LIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAG 178
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C+P+L T +L+HG R + A L +M R P++ Y +I L + + A
Sbjct: 179 CVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDAC 238
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ +M +K D + Y+ + GL K+ ++ L R + G P T ++
Sbjct: 239 AMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGL 298
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + R+D L Y+ RG P L+ GLC G+ +EAF+ + M
Sbjct: 299 CRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADV 358
Query: 458 ASYRMLQRYLVQAN-ANEKLEDLDRMIKNLQAVLPPPT 494
+Y L L +A +E L RM++ PP T
Sbjct: 359 VTYSTLIDGLCKAGRVDEAHLLLARMVR---MGTPPST 393
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 147/359 (40%), Gaps = 12/359 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMS 143
ALEFF+ +P + + L + QA EL+ ++ P ++T +
Sbjct: 98 ALEFFRK--MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILV 155
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
L + SK + E L RE+ +N LL C + + +A ++
Sbjct: 156 DGLCKESKVAAAWEVL-------REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRD 208
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R PN T L+ G + G V +M+ +G P ++ YN+ I+G CK
Sbjct: 209 MTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQ 268
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+++ L P + T +++I+G + +A +L + R PD+ Y+
Sbjct: 269 VDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYST 328
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L + ++ A +L + M D VTY T+ GL K+ ++ L RM+
Sbjct: 329 LIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMG 388
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T T L+K C +D + L + P ++L+ G+C R + A
Sbjct: 389 TPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSA 447
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 107/263 (40%), Gaps = 33/263 (12%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P+VVTYN IDG CK A LFE M+ V C PS+ T TL+ G + +A
Sbjct: 5 GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64
Query: 302 RQLFDEMPKR---------------------------------NLKPDIGAYNAMISSLI 328
LF EM R P++ Y+ +I L
Sbjct: 65 MALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDRCSPNVITYSVLIDGLC 124
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ ++ A+EL++ M+ + D +TY + GL K S + ++ M++ VP
Sbjct: 125 KANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C RV L L + RG P+ L+ GLC GR ++A M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244
Query: 449 LVRRRQVSEASYRMLQRYLVQAN 471
+ + Y ML L +A+
Sbjct: 245 IDKGGTPDLMIYNMLINGLCKAD 267
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 127/303 (41%), Gaps = 17/303 (5%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P + LH L R R A LM + + P+++T ++ L ++ + +
Sbjct: 180 VPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACA 239
Query: 158 TLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
L I K G+ + +N+L+ C ++ E+ ++ + +S P+
Sbjct: 240 MLADM----------IDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVV 289
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T + ++ G S + + RG P V+ Y+ IDG CK G +A L+E M
Sbjct: 290 TYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVM 349
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C + T +TLI G + +A L M + P YN++I L L
Sbjct: 350 TGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHL 409
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC-KLYDRMIEGKFVPKTRTVVM 392
+ A+EL++EME VTY+ + G+ + ++ + MI+ +P T +
Sbjct: 410 DEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHITYSI 469
Query: 393 LMK 395
L++
Sbjct: 470 LLE 472
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 76/166 (45%), Gaps = 3/166 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C ++ EA ++ V + T + L+ G ++G V + MV
Sbjct: 326 YSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMV 385
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G PS +TYN I G C +A+ L EEMER C PS T LIHG + +
Sbjct: 386 RMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVD 445
Query: 300 QAR-QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL-MDEM 343
A F EM + PD Y+ ++ L + +DL+ L +D+M
Sbjct: 446 SAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 491
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 86/213 (40%), Gaps = 12/213 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + ++ L R D+A L+ +V+ P ++ ++ L + K
Sbjct: 286 PDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVD----- 340
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNI 217
EAFD E G ++ L+ C + EA + +++ P + T N
Sbjct: 341 -EAFDLYEVMTGDGC-DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNS 398
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK-KGCFGDAMRLFEEMERV 276
L+ G + + EM PS VTYNI I G C+ + A+ F+EM
Sbjct: 399 LIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDN 458
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQL-FDEM 308
+P T + L+ G +++H+ R L D+M
Sbjct: 459 GVIPDHITYSILLEGLKKSKDLHELRHLVLDQM 491
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 72/159 (45%), Gaps = 8/159 (5%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +P++ YN++I L + + + A EL + M+ VTY+T+ GL ++
Sbjct: 1 MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVV---MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
LE L+ M++ ++ V+ +L+ C +++ L + + DR P+
Sbjct: 61 LERAMALFQEMLD----RRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVIT 115
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+L+ GLC R +A E + M R +Y +L
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTIL 154
>gi|359487106|ref|XP_002274114.2| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Vitis vinifera]
Length = 571
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 105/399 (26%), Positives = 187/399 (46%), Gaps = 17/399 (4%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMR 117
P +P S++ + + + + ++N K ALEFF + F T D + + IL +
Sbjct: 167 PIISPNSTSFDHSTVRQTLSCYANDWKRALEFFDWVQTQCGFNHTTDTYNGMIDILGKFF 226
Query: 118 YFDQAWELMSHVQR---THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
FD W L+ ++ +P+ +T + + R + EE + A+ R E +R
Sbjct: 227 EFDLIWVLIQRMKADPVAYPNHVTFR---FVFKRYAAAHLVEEAMNAYYRTEE---FNLR 280
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFKESGDVTAME 232
S ++ L+ A C K + EA +F+K N+ K NI+L G+ + G
Sbjct: 281 DETS--YSNLIDALCEYKHVIEAEELFLKESKDLVFNDDVKIYNIILRGWFKMGWWKKCR 338
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
F+ EM RG S+ +Y+I +D CK G A++L++EM++ + T+I
Sbjct: 339 EFWEEMDRRGVCKSLYSYSIYMDIQCKSGKPWRAVKLYKEMKKKGIRLDVVAYNTVIRAI 398
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
GL + + ++F EM + +P++ YN +I L + A + D+M EK +
Sbjct: 399 GLSEGVDFSIRVFREMKEVGCEPNVVTYNTIIKLLCENGRIREAYGVFDQMREKGYAPNV 458
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
+TYH FFG ++ + + + +DRMI P+ T VMLMK F + +W
Sbjct: 459 ITYHC-FFGCIEKP--KQILRTFDRMINSGVRPRMDTYVMLMKKFGRWGFLRPVFIVWKK 515
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ ++G P A + L+ L +G + A + ++ML +
Sbjct: 516 MEEQGCSPDACAYNALIDALVQKGMVDLARKYEEEMLAK 554
>gi|413939122|gb|AFW73673.1| hypothetical protein ZEAMMB73_530264 [Zea mays]
Length = 526
Score = 134 bits (336), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 111/465 (23%), Positives = 188/465 (40%), Gaps = 23/465 (4%)
Query: 22 LLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
L S + + R++ H P P L LS L+ +L RL A
Sbjct: 37 LALPPIAPSPAADELARLLLAHHNPFHPAESPLQLLSGGGVSLSGDLLVQILLRLRGASK 96
Query: 82 NGLKALEFFKFTLQHPHFT---PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT 138
L L + HP F P DA++ + L R R FD AW ++ V + +
Sbjct: 97 LALSLLHAARL---HPSFVNTQPRSDAYDAVVDALGRARQFDAAWRVV--VDASADGAAS 151
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
++ +++ R + + AFD ME FV R+ + EF LL C K K A
Sbjct: 152 PRTFAVLARRYVAAGMTRQAIRAFDDME--AFVS-REPDAAEFATLLDTLCKYKYPKVAT 208
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
VF K ++ PN K +IL+ G+ + + F +M++ G P++VTYNI ++G C
Sbjct: 209 EVFNKRKYKYGPNEKMYSILIYGWCKVNRSDMAKKFLKDMLVHGIEPNIVTYNILLNGIC 268
Query: 259 KKGCFGDAMR----------LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
+ R L +EM P + + + ++H +F M
Sbjct: 269 RHASLHPDYRFDRTVHAAEDLLKEMRGRGIEPDVTSYSIILHVYSRAHKPELCLCMFRSM 328
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+R + P + Y ++I L C L L+DEM + + TY+ +
Sbjct: 329 KERGICPTVATYTSVIKCLSSCGRLEDGEILLDEMVAEGVCPSPATYNCFLKEYRGRKDV 388
Query: 369 EGVCKLYDRM-IEGKF-VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+LY++M G P T +L+ F R +++W + + P +
Sbjct: 389 TAALELYNKMKAPGSLTAPDIHTYNILLGMFSKLNRHGTVMDIWSDMCESTVGPDLDSYT 448
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
LL+ C +W EA + +M+ + + ++ L R L+QA+
Sbjct: 449 LLIHCFCDSQKWREACQFFMEMIEKGFLPQKITFETLYRGLIQAD 493
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/265 (20%), Positives = 110/265 (41%), Gaps = 20/265 (7%)
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQS------YEETLEAFDRMEREIFVGIRKFGSE--- 179
V P+++T +I+L+ I + S ++ T+ A + + +E+ R G E
Sbjct: 250 VHGIEPNIVTY---NILLNGICRHASLHPDYRFDRTVHAAEDLLKEM----RGRGIEPDV 302
Query: 180 -EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
++++L + + + +F + R P T ++ G + E+ E
Sbjct: 303 TSYSIILHVYSRAHKPELCLCMFRSMKERGICPTVATYTSVIKCLSSCGRLEDGEILLDE 362
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL--PSLQTITTLIHGAGLV 295
MV G PS TYN + Y + A+ L+ +M+ L P + T L+ +
Sbjct: 363 MVAEGVCPSPATYNCFLKEYRGRKDVTAALELYNKMKAPGSLTAPDIHTYNILLGMFSKL 422
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
++ +M + + PD+ +Y +I + A + EM EK +T+
Sbjct: 423 NRHGTVMDIWSDMCESTVGPDLDSYTLLIHCFCDSQKWREACQFFMEMIEKGFLPQKITF 482
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIE 380
T++ GL+++ L +L R+ E
Sbjct: 483 ETLYRGLIQADMLRTWRRLKRRVDE 507
>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
lyrata]
Length = 754
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 109/465 (23%), Positives = 203/465 (43%), Gaps = 37/465 (7%)
Query: 49 PLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEK 108
P T+ P + LSS+ V+ L + ++ AL F + P+F+P P +E+
Sbjct: 31 PPSSTISFASPNSAALSSSDVK--LLDSLRSQADDSAALRLFNLASKKPNFSPEPALYEE 88
Query: 109 TLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA------- 161
L L R FD +++ ++ + + T I++ ++F+ +E L
Sbjct: 89 ILLRLGRSGSFDDMRKILEDMKNSGCEMGT-SPFLILIESYAQFELQDEILGVVHWMIDD 147
Query: 162 ---------FDRMEREIFVGIR----------------KFGSEEFNVLLQAFCTQKEMKE 196
++RM + G K FNVL++A C +++
Sbjct: 148 FGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRP 207
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A + + S P+ KT ++ G+ E GD+ +MV G S V+ N+ +
Sbjct: 208 AILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVH 267
Query: 256 GYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G+CK+G DA+ +EM + P T TL++G ++ A ++ D M +
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ YN++IS L + ++ A+E +D+M + + VTY+T+ L K + +E +L
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ +P T L++ C+ + + L+ + +G P ++L+ LCS
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+G+ +EA KQM + S +Y L +AN + E++
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEI 492
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 108/433 (24%), Positives = 188/433 (43%), Gaps = 16/433 (3%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S + NV+ F AL F + F P F ++ L + + A E+
Sbjct: 258 SNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEI 317
Query: 126 MSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFN 182
M + + P + T S+ +S + K +E +E D+M R+ + +N
Sbjct: 318 MDVMLQEGYDPDVYTYNSV---ISGLCKLGEVKEAVEFLDQMITRDC-----SPNTVTYN 369
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEMVL 240
L+ C + +++EA + L S+ P+ T N L+ G + + AME+F EM
Sbjct: 370 TLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF-EEMRS 428
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G P TYN+ ID C KG +A+ + ++ME C S+ T TLI G I +
Sbjct: 429 KGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIRE 488
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A ++FDEM + + YN +I L + R + A +LMD+M + D TY+++
Sbjct: 489 AEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLT 548
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ ++ + M P T L+ C RV++ L + +G
Sbjct: 549 HFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIAL 608
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA-SYRMLQRYLVQANANEKLEDL 479
HA + ++ GL + + EA ++ML + +A SYR++ R L + E +
Sbjct: 609 TPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIR-EAV 667
Query: 480 DRMIKNLQAVLPP 492
D +++ L+ P
Sbjct: 668 DFLVELLEKGFVP 680
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 85/179 (47%), Gaps = 2/179 (1%)
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M +KPD+ +N +I +L R L A+ ++++M + D T+ T+ G ++
Sbjct: 179 KMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEG 238
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR-GFCPHGHAL 425
L+G ++ ++M+E +V +++ FC RV+ LN + ++ GF P +
Sbjct: 239 DLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTF 298
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMI 483
+ LV GLC G + A E ML +Y + L + E +E LD+MI
Sbjct: 299 NTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357
>gi|356499253|ref|XP_003518456.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Glycine max]
Length = 510
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 111/455 (24%), Positives = 202/455 (44%), Gaps = 26/455 (5%)
Query: 31 SEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFF 90
S+ E I++++ H P H T L+ TL+ + L RL HS AL F
Sbjct: 35 SDAELISKLLLQH---HNPFHATESPLQLHGITLTPTLLFHTLLRL-KNHSK--IALSLF 88
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ P+ + +F + +A++R FD AW+L+ + + H T + ++ R+
Sbjct: 89 HYAKTLPNPPLSHSSFTLLIDTMAKVRQFDVAWQLIVEMDQRHHLTPTPSTFLTLIRRLI 148
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP 210
+ + AF ++ K ++F VLL C ++ A VF K F P
Sbjct: 149 CAGLTRQAVRAFHDIDA---FSETKTTPQDFCVLLDTLCKYGHVRLAVEVFNKNKHTFPP 205
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG------ 264
K +L+ G+ + G + + F +EM+ +G P+VVTYN+ ++G C+K
Sbjct: 206 TVKMYTVLIYGWCKIGRIKTAQSFLNEMIDKGIEPNVVTYNVLLNGVCRKVSLHPEERFE 265
Query: 265 ----DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE---MPKRNLKPDI 317
+A +F++M P + + + L+H + H+ + + D+ M ++ + P++
Sbjct: 266 RTIRNAEEVFDQMRESGIEPDVTSFSILLH---VYSRAHKPQLVLDKLSLMKEKGICPNV 322
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y ++I L C L A L+ EM + TY+ F E +++ R
Sbjct: 323 VMYTSVIKCLASCGWLEDAERLLGEMVRDGVSPCAATYNCFFKEFRGRKDGESALRMFKR 382
Query: 378 MIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M E G +P + T V+L++ F + + +W + + G P +L+ GLC R
Sbjct: 383 MKEDGLCMPSSHTYVILIRMFLRLDMIKVVKEIWQDMKETGAGPDLDLYTVLIHGLCERQ 442
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
RW EA +M+ + ++ L R L+QA+
Sbjct: 443 RWREACHYFVEMIENGFLPLKGTFESLYRGLIQAD 477
>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
Length = 581
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 132/270 (48%), Gaps = 8/270 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
++N++LQ+ C E A +F ++R AP T N ++ G +S ++ A + E
Sbjct: 47 DYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEE 106
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+V RG P VVTYN ID CK G +A RL M C+P++ T + LI+G V
Sbjct: 107 LVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGR 166
Query: 298 IHQARQLFDEMPKR--NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNV 353
I +AR+L EM ++ ++ P+I YN+ + L + A ELM + + R+ D V
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ GL K + C D MI G +VP T L+ C +++ + +
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+D+G P +LV C R +EA E
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALE 314
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 162/359 (45%), Gaps = 14/359 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQ----RTHPSLLTLKSMSIMLSRISKFQSYE 156
P + L L + +A ELM ++ R P +T ++ I
Sbjct: 186 PNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTL------IDGLCKCG 239
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+T EA + ++ G +N L+ C +M+ A ++ ++ + P+ T
Sbjct: 240 QTDEACND---DMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITY 296
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++L+ F ++ V H M RG P+VVT+N IDG CK G+A ++ ++
Sbjct: 297 SVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYN 356
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P T LI GA N QA LF+EM +N++PD+ + A+I L + + A
Sbjct: 357 RMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEA 416
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +++D M + + VTY+ + GL KS +E C+ + M+ VP++ T L+
Sbjct: 417 ARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVY 476
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C R D L L L G+ P ++LV GL G+ E+A ++M+ + Q
Sbjct: 477 ALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 535
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/350 (22%), Positives = 143/350 (40%), Gaps = 40/350 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C E+ +F +L+ R P+ T N L+ ++GD+ + M
Sbjct: 84 YNTIINGLCKSNELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMS 143
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC--LPSLQTITTLIHG------ 291
RG P+VVTY++ I+G CK G +A L +EM R +C LP++ T + + G
Sbjct: 144 SRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSM 203
Query: 292 -----------------------------AGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
GL + D+M P++ YNA
Sbjct: 204 TAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNA 263
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+++ L + + A +++ M +K + D +TY + K+S ++ +L M
Sbjct: 264 LVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRG 323
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T ++ C + R + + +R P ++L+ G C G +E+A
Sbjct: 324 CTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQAS 383
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
++M+ + Q ++ L L +A E D+ ++ NL +PP
Sbjct: 384 ALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG--VPP 431
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 132/299 (44%), Gaps = 14/299 (4%)
Query: 102 TPDAFEKTLHILA--RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKF-QSYE 156
TPD ++ + A + D+A EL+ + P+++T S+ L + + ++++
Sbjct: 290 TPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQ 349
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L+ ++RM V FN+L+ C ++A ++F +++++ P+ T
Sbjct: 350 IALQVYNRMLVPDKV--------TFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTF 401
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G ++G V A M G P+VVTYN+ + G CK G + EEM
Sbjct: 402 GALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVS 461
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C+P T +L++ A QL ++ PD YN ++ L +
Sbjct: 462 SGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQ 521
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+ +++EM K D+ T+ F GL +S L G +L ++ +P T ++
Sbjct: 522 AITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSIL 580
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/272 (23%), Positives = 115/272 (42%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ AFC + EA + + SR PN T N ++ G +S ++
Sbjct: 296 YSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVY 355
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P VT+NI I G CK G F A LFEEM P + T LI G +
Sbjct: 356 NRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVE 415
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR + D M + P++ YN ++ L + + E ++EM +++TY ++
Sbjct: 416 AARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLV 475
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ L ++S + +L ++ + P T T +L+ + + + + + ++ +G
Sbjct: 476 YALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQ 535
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P GL G E + +L +
Sbjct: 536 PDSFTFAACFGGLHRSGNLAGTMELLRVVLAK 567
>gi|357156708|ref|XP_003577549.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial-like [Brachypodium distachyon]
Length = 522
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 114/463 (24%), Positives = 186/463 (40%), Gaps = 18/463 (3%)
Query: 22 LLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
L S + + R++ H P P TL LS +L+ +L RL A
Sbjct: 32 LALPPVVPSPAADELARLLLSHHNPFHPAESTLQLLSGGGVSLSQSLLVQILLRLRGASK 91
Query: 82 NGLKALEFFKF-TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
L L + P DA++ + L R FD AW L+ V+ T +
Sbjct: 92 LALSLLNSARLHPSPSVSSPPNADAYDAVVDALGRAHQFDAAWRLV--VEAAADGAATSR 149
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ +++ R + + AFD ME FVG R+ + EF LL C K K A V
Sbjct: 150 TFAVLARRYVAAGMTRQAVRAFDDME--AFVG-REPDAGEFTTLLDTLCKYKYPKVATEV 206
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F K ++ PN K IL+ G+ + + F +M+ G P+VVTYNI ++G C+
Sbjct: 207 FNKRKYKYEPNEKMYTILIYGWCKVNRNDMSQKFLKDMIDHGIEPNVVTYNILLNGVCRH 266
Query: 261 GC------FGDAMR----LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
F +R L +EM P + + + ++H +F M
Sbjct: 267 ASLHPDNRFDRTVRAAEDLLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKD 326
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R + P + Y ++I L C L A L+ EM + + TY+ F + G
Sbjct: 327 RGICPTVATYTSVIKCLASCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIG 386
Query: 371 VCKLYDRM--IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+LY +M P + +L+ F + LW + + P + LL
Sbjct: 387 ALELYKKMKAPASPTAPDIHSYHILLGMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLL 446
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ G C +W EA + +M+ + + ++ +L R L+QA+
Sbjct: 447 IHGFCENEKWREACQFFMEMIEKGFLPQKITFEILYRGLIQAD 489
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/232 (21%), Positives = 96/232 (41%), Gaps = 16/232 (6%)
Query: 162 FDRMER---EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
FDR R ++ +R G E ++++L + + + +F + R P
Sbjct: 275 FDRTVRAAEDLLKEMRDRGIEPDVTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVA 334
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T ++ G + E HEM G PS TYN Y + A+ L+++M
Sbjct: 335 TYTSVIKCLASCGRLEDAERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKM 394
Query: 274 ERVAC--LPSLQTITTLIHGAGLVRNIHQ---ARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ A P + + L+ G+ ++Q +L+++M + + PD+ +Y +I
Sbjct: 395 KAPASPTAPDIHSYHILL---GMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFC 451
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
A + EM EK +T+ ++ GL+++ L +L R+ E
Sbjct: 452 ENEKWREACQFFMEMIEKGFLPQKITFEILYRGLIQADMLRTWRRLKKRVDE 503
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 49/224 (21%), Positives = 88/224 (39%), Gaps = 11/224 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S SI+L S+ E L F M +R I + + S +++ + +++A
Sbjct: 298 VTSYSIVLHVYSRAHKAELCLCMFRSMKDRGICPTVATYTS-----VIKCLASCGRLEDA 352
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIRI 254
+ ++ S P+ T N ++ DV Y +M P + +Y+I +
Sbjct: 353 ERLLHEMASEGVCPSPATYNCFFKEYRGRKDVIGALELYKKMKAPASPTAPDIHSYHILL 412
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+ K G L+ +M P L + T LIHG +A Q F EM ++
Sbjct: 413 GMFVKLNQHGTVTELWNDMCESTVGPDLDSYTLLIHGFCENEKWREACQFFMEMIEKGFL 472
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYH 356
P + + LI+ L L ++E+ + G + YH
Sbjct: 473 PQKITFEILYRGLIQADMLRTWRRLKKRVDEEAAKFGDEYKLYH 516
>gi|255579531|ref|XP_002530608.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529856|gb|EEF31788.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 596
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 201/452 (44%), Gaps = 21/452 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+ ++E++ RI+ + P L L ++ + + L E VL R A + G +
Sbjct: 73 AKDVEKVYRILRNF----HSRVPKLELALQESGVTMRAGLTERVLNRCGDAGNLGYR--- 125
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + ++ + I ++MR F W L+ +++ + L+T + +++ R
Sbjct: 126 FFVWASKQPGYRHSYENYKAMVKIFSKMRQFGAVWALLEEMRKDNSVLITSELFIVLIRR 185
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ + E+ +E D M K+G E F LL A C +K+A S+F +
Sbjct: 186 FASARLVEKAIEVLDEMP--------KYGCEPDEYVFGCLLDALCKNGSVKQAASLFEDM 237
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF+P+ + LL G+ G + + +M GF P +V +N + Y G
Sbjct: 238 RVRFSPSLRHFTSLLYGWCREGKLIEAKHVLVQMREAGFEPDIVVFNNLLSAYSMAGKMT 297
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA L +EM R C P+ + T +I + +A ++F EM + + D+ Y A+I
Sbjct: 298 DAFDLLKEMVRKGCEPNANSYTIMIQAFCSQEKMDEAMRVFVEMERTGCEADVVTYTALI 357
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
S + +N +++D M++K + +TY + K LE +L + M V
Sbjct: 358 SGFCKWGKINRGYQILDAMKQKGHMPNQLTYLRILLAHEKKEELEECLELIESMRMVGCV 417
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P ++++ C V G+ +W + F P +++ G +G EA E
Sbjct: 418 PDLSIYNVVIRLACKLGEVKQGVQIWNEMEASDFSPELDTFVIMIHGFLGQGCLVEACEY 477
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
K+M + R ++ Y +L+ L EKL
Sbjct: 478 FKEM-IGRGLLTTPQYGILKELLNALLRGEKL 508
>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
Length = 724
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 5/312 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
E L+ +DRM RE V +N L+ C+++ + +A SVF ++ ++ PN +T
Sbjct: 334 EALDFWDRMIREGVVP----NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ G+ ++GD+ ++ M+ G P+VV Y +D C+ F A L E M+
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T T I G + A ++FD+M P+ YN ++ SL++ R
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ +ME + I + VTY+T+ +G + L +L +M+ P TV +++
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+C +V++ + L L + P A L++G+C+ EEA ++ML
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629
Query: 456 SEASYRMLQRYL 467
+ A++ +L R+L
Sbjct: 630 NVATWNVLVRHL 641
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 6/340 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ + K ++EE + D M + GI + ++ A ++ + +V K+
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNK---GIDP-NVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+R +PN T L+ GF G F+ M+ G P+VV YN + G C K
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA+ +F +ME C P+++T + LI G ++ A ++++ M P++ AY M
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ L R N A L++ M+ + + VT++T GL S ++ K++D+M
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T T L+ + R L + RG + + ++ G C G EA E
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 444 CSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLEDLDRM 482
+M+VR + + + + Y Q N ++ +DR+
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 178/455 (39%), Gaps = 81/455 (17%)
Query: 65 SSTLVE-NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
SS L E +VL RL H L ALE+FK F TP ++ + LA R D
Sbjct: 38 SSVLKEADVLKRLKHEHDITL-ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQ---SYEETLEAFDRME-------------- 166
L+ ++ S S + +S I ++ S E+ L+ F RM+
Sbjct: 97 YLLQQMKLEGISC----SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHI 152
Query: 167 -------------REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
I+ ++K G E +N+LL+A C + A + V++ S+
Sbjct: 153 LDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212
Query: 210 -PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ + L+ + G V E+ + F PSV YN I+G CK+ F +A +
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAR----ELAMS-FTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 269 LFEEMERV-----------------------------------ACLPSLQTITTLIHGAG 293
L +EM C P+L T T+LI G
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
L H+A +D M + + P++ AYNA++ L R L A+ + ++ME +
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + G K+ L+G ++++ MI P ++ C N + L +
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ + + GLC GR + A + QM
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 110/259 (42%), Gaps = 11/259 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMS 143
A E + + + H P A+ + +L R F+QA+ L+ + V+ P+ +T +
Sbjct: 405 ASEVWNWMITHG-CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTF- 462
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ + + ++ FD+M + +N LL + + EA +
Sbjct: 463 --IKGLCGSGRVDWAIKVFDQMGNSGCFP----NTTTYNELLDSLLKDRRFGEAFGLVKD 516
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R N T N ++ G+ +G + +MV+RG +P +T NI ID YCK+G
Sbjct: 517 MEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGK 576
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A++L + + P + T+LI G + +A M + P++ +N
Sbjct: 577 VNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNV 636
Query: 323 MISSLIRCRDLNAAMELMD 341
++ L + A++ +D
Sbjct: 637 LVRHLFSNMGHSGAVQFLD 655
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 109/267 (40%), Gaps = 11/267 (4%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ W M HP+++ M +L R S F +A+ +E + V +
Sbjct: 407 EVWNWMI-THGCHPNVVAYTCMVDVLCRNSMFN------QAYCLIEN-MQVENCPPNTVT 458
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ C + A VF ++ S PN T N LL + +M
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG ++VTYN I GYC G G+A+ L +M P T+ +I ++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A QL D + PDI AY ++IS + + A+ + M + I + T++ +
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Query: 360 FGLMKSSGLEGVCKLYD--RMIEGKFV 384
L + G G + D +++ KFV
Sbjct: 639 RHLFSNMGHSGAVQFLDASSIMQPKFV 665
Score = 46.2 bits (108), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 40/248 (16%)
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
++ ++ +M L G S + I Y + G A++ F M+ P+++
Sbjct: 91 EMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYN 150
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
++ ++ M K ++P++ YN ++ +L + ++ A +L+ EM K
Sbjct: 151 HILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK 210
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D V+Y T+ + +CKL GK V + R + M
Sbjct: 211 GCDPDEVSYTTL---------ISSLCKL------GK-VKEARELAM-------------- 240
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
F P + L+ G+C +EEAF+ +M+ + + SY +
Sbjct: 241 ----------SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 467 LVQANANE 474
L A E
Sbjct: 291 LSDAGNVE 298
>gi|297797613|ref|XP_002866691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312526|gb|EFH42950.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 638
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/427 (23%), Positives = 186/427 (43%), Gaps = 20/427 (4%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+S++E+ RI+ P L L ++ L L+E VL R A + G +
Sbjct: 81 ASDVEKAYRILRKF----HSRVPKLELALNESGVELRPGLIERVLNRCGDAGNLGYR--- 133
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + ++ + IL++MR F W L+ +++ +P L+ + +++ R
Sbjct: 134 FFVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQR 193
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ ++ +E D M FG E F LL A C +K+A +F +
Sbjct: 194 FASADMVKKAIEVLDEMP--------TFGLEPDEYVFGCLLDALCKHGSVKDAAKLFEDM 245
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF N + LL G+ + + +M GF P +V Y + GY G
Sbjct: 246 RLRFPVNLRYFTSLLYGWCREEKMMEAKYVLVQMKEAGFEPDIVDYTNLLSGYANAGKMA 305
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA L ++M R P+ T LI V + +A ++F EM + + D+ Y A++
Sbjct: 306 DAYDLLKDMRRRGFEPNATCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALV 365
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
S + ++ ++D+M +K + +TY + K L +L ++M + ++
Sbjct: 366 SGFCKWGKIDKCYLVLDDMIKKGLMPSQLTYMHIMAAHEKKEKLIECLELMEKMKQIEYH 425
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P ++++ C V + LW + G P +++ GL S+G EA +
Sbjct: 426 PDIGIYNVVIRLACKLGEVKEAVRLWNEMEGNGLSPGADTFVIIINGLTSQGCLLEACDH 485
Query: 445 SKQMLVR 451
K+M+ R
Sbjct: 486 FKEMVAR 492
>gi|357499971|ref|XP_003620274.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495289|gb|AES76492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 498
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 151/310 (48%), Gaps = 9/310 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + EA ++ +++S +P+ T + L+ GF G + +++M+
Sbjct: 181 YNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMI 240
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L +P V T+NI +DG+CK G + +F M + P++ T +L+ G LV+ ++
Sbjct: 241 LENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 300
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+ M + + PD +YN MI+ + + ++ AM L +M K I + VTY ++
Sbjct: 301 KANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLI 360
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID---- 415
GL KS + KL D M + P T ++ C N +VD + L L D
Sbjct: 361 DGLCKSGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFE 420
Query: 416 ----RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+G+ +A +++ G C +G + EA +M R +Y ++ L + +
Sbjct: 421 DLFVKGYNLDVYAYTVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKD 480
Query: 472 ANEKLEDLDR 481
N+ E L R
Sbjct: 481 ENDMAEKLLR 490
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 146/301 (48%), Gaps = 10/301 (3%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNIL 218
EAFD + GI ++ L+ F ++K+A +F K +L P+ T NIL
Sbjct: 196 EAFDLYSEMVSEGISP-DVVTYSALISGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 254
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF + G + + + M+ +G +P+VVTY +DGYC A +F M +
Sbjct: 255 VDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKANSIFNTMAQGGV 314
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P Q+ +I+G ++ + +A LF +M +N+ P++ Y ++I L + ++ A++
Sbjct: 315 NPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLIDGLCKSGKISYALK 374
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG----VCKLYDRMIEGKFVP----KTRTV 390
L+DEM ++ + D +TY ++ L K+ ++ + KL D++ E FV
Sbjct: 375 LVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQVFEDLFVKGYNLDVYAY 434
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++++ FCV + L L + D G P ++++ L + + A + ++M+
Sbjct: 435 TVMIQGFCVKGLFNEALALLSKMEDNGRIPDAKTYEIIILSLFKKDENDMAEKLLREMIA 494
Query: 451 R 451
R
Sbjct: 495 R 495
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/318 (22%), Positives = 133/318 (41%), Gaps = 18/318 (5%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L + K Y + +ME + GI N+L+ F + + SVF +
Sbjct: 66 ILGSLVKINCYHTAISLHRQMELK---GIAS-NLVTLNILINCFSQLGQNPLSFSVFANI 121
Query: 205 LSR-FAPNNKTMNILLLGFK-------------ESGDVTAMEMFYHEMVLRGFRPSVVTY 250
L + + PN T+ L+ G + G A + + +P+VV Y
Sbjct: 122 LKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCKVGQARAALQLLRRVDGKLVQPNVVMY 181
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N ID CK +A L+ EM P + T + LI G +V + A LF++M
Sbjct: 182 NTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLFNKMIL 241
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
N+KPD+ +N ++ + + + M ++ I + VTY ++ G +
Sbjct: 242 ENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNK 301
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+++ M +G P T++ +++ FC +VD +NL+ + + P+ L+
Sbjct: 302 ANSIFNTMAQGGVNPDTQSYNIMINGFCKIKKVDEAMNLFKKMHCKNIIPNVVTYTSLID 361
Query: 431 GLCSRGRWEEAFECSKQM 448
GLC G+ A + +M
Sbjct: 362 GLCKSGKISYALKLVDEM 379
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/246 (21%), Positives = 98/246 (39%), Gaps = 50/246 (20%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEME-------------RVACL------------ 279
P + + + K C+ A+ L +ME + C
Sbjct: 58 PPIFEFGKILGSLVKINCYHTAISLHRQMELKGIASNLVTLNILINCFSQLGQNPLSFSV 117
Query: 280 ----------PSLQTITTLIHG-----------AGLVRNIHQAR---QLFDEMPKRNLKP 315
P++ T+TTLI G GL + + QAR QL + + ++P
Sbjct: 118 FANILKKGYDPNVITLTTLIKGLCLKVSYGTLINGLCK-VGQARAALQLLRRVDGKLVQP 176
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ YN +I S+ + + +N A +L EM + I D VTY + G L+ L+
Sbjct: 177 NVVMYNTIIDSMCKVKLVNEAFDLYSEMVSEGISPDVVTYSALISGFFIVGKLKDAIDLF 236
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
++MI P T +L+ FC + ++ G ++ ++ +G P+ L+ G C
Sbjct: 237 NKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLV 296
Query: 436 GRWEEA 441
+ +A
Sbjct: 297 KQVNKA 302
>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
Length = 663
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 141/284 (49%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +++ A++ FV++ + P+ T N LL G+ ++G+ + + ++
Sbjct: 340 YNAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLR 399
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNI IDGYC+ G +A RL EEM CLP + T T L+ G+ V ++
Sbjct: 400 RAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLA 459
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
R+ FDEM + L+PD AYN I + I D++ + +L + + + I D VTY+ +
Sbjct: 460 MTREFFDEMLSKGLRPDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILI 519
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ +L +MI P T L+ C + + +I G
Sbjct: 520 DGLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLP 579
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P +++ C RG A+ ++ML + +E +Y +L
Sbjct: 580 PSAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 623
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 6/255 (2%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S F ++ S AP+ K N +L +++ M + EM+ G PS+VTYN +D +
Sbjct: 182 SAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSF 241
Query: 258 CKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR-NLK 314
K+G L +EME +CLP+ T +I AGL R + R + K
Sbjct: 242 SKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVI--AGLARKGYLEEAAELVEEMRLSKK 299
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
YN +I+ L+ + +L EME + I VTY+ M GL++S +E
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M +P T L+ +C L L+G L G P ++L+ G C
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419
Query: 435 RGRWEEAFECSKQML 449
G EEA ++M+
Sbjct: 420 LGDLEEARRLKEEMV 434
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/374 (20%), Positives = 152/374 (40%), Gaps = 30/374 (8%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
L+ +L R F +K ++ + +++ PT + +H L +
Sbjct: 308 LITGLLARGF------VKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQS----------G 351
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEE----FN 182
++ + +++M ++ I+ +A ++ E + G +R+ G +N
Sbjct: 352 QIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYN 411
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+L+ +C +++EAR + +++ + P+ T IL+ G + F+ EM+ +
Sbjct: 412 ILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSK 471
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT----LIHGAGLVRN 297
G RP YN RI C + GD + F ++ V L + + T LI G N
Sbjct: 472 GLRPDCFAYNTRI---CAEITLGDISKSF-QLREVIMLEGISSDTVTYNILIDGLCKTGN 527
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A +L +M L+PD Y +I + L A + ++M + VTY
Sbjct: 528 LKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTV 587
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + L + +M+E P T +L+ C R L + +++RG
Sbjct: 588 IIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERG 647
Query: 418 FCPHGHALDLLVTG 431
P+ + LL+ G
Sbjct: 648 LVPNKYTYTLLIDG 661
>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
Length = 475
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 160/340 (47%), Gaps = 9/340 (2%)
Query: 113 LARMRYFDQAWELM-SHVQRTHPSLLTLKSMSIM-LSRISKFQSYEETLEAFDRMEREIF 170
L + D A L+ + ++R + + SM I L + K Q +E L+ +R
Sbjct: 59 LCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRT----- 113
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDV 228
+ R +N LL + C K++ +A ++F ++S P+ + +IL+ GF + ++
Sbjct: 114 ISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDEL 173
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
E Y +M+ P+V TYN ++G +KG DA ++EEM C P + T +TL
Sbjct: 174 GRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTL 233
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
IHG L R QA +LF+ M R +P+ YN ++ L + + A EL +M E+
Sbjct: 234 IHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGC 293
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D VTY T+ +G +E +++D M+ P L+K F +
Sbjct: 294 DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQ 353
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ ++ R P + ++++ GL R ++A E ++M
Sbjct: 354 LFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERM 393
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 105/218 (48%), Gaps = 4/218 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
++ L+ F ++ +A +F ++SR PN T N LL G KES A E+F +M
Sbjct: 230 YSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELF-RKM 288
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V RG P VTY + G+C G A+ +F+EM P + L+ G
Sbjct: 289 VERGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKP 348
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHT 357
+ARQLF M R KPD ++N MI L + + L+ A+E+ + ME+ D VTY++
Sbjct: 349 GEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNS 408
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ FGL L K++ + K P +L++
Sbjct: 409 LIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLE 446
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 118/264 (44%), Gaps = 4/264 (1%)
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC--LPS 281
++G V + M+ RG+ P + T+++ I+ CK +A + M R S
Sbjct: 61 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASS 120
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ +L++ + +HQA +F M +R++ PD+ +Y+ +I + +L A +L
Sbjct: 121 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLY 180
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+M + + TY+ GLM+ + +Y+ MI P T L+ F +
Sbjct: 181 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLA 240
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ D L+ +I RG P+ + L+ GLC + +EA E ++M+ R + +Y
Sbjct: 241 RKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTY 300
Query: 461 -RMLQRYLVQANANEKLEDLDRMI 483
+L + + +E D M+
Sbjct: 301 TTLLYGFCNVGKIEQAVEVFDEMV 324
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 13/233 (5%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+P + +H + R DQA EL + + P+ +T + +L + K +E
Sbjct: 224 SPDVITYSTLIHGFSLARKHDQAHELFEAMISRGCRPNAVTY---NCLLHGLCKESKPDE 280
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E F +M ER + LL FC ++++A VF +++S+ P+
Sbjct: 281 AHELFRKMVERGC-----DPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAY 335
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N LL GF +G + MV R +P V++NI IDG K DA+ +FE ME+
Sbjct: 336 NCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQ 395
Query: 276 V-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
C P L T +LI G + + +A ++F E+ + L PD A+N ++ ++
Sbjct: 396 DHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKLSPDPHAFNVLLEAM 448
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 5/131 (3%)
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGV---CKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
E + +NV + GL KS +E C+ + P + T +++ C
Sbjct: 4 ESKAPLNNVAWTAFLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAG 63
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM--LVRRRQVSEAS 459
RVD L+L +I RG+CP +L+ LC + +EA E + M + R S S
Sbjct: 64 RVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFS 123
Query: 460 YRMLQRYLVQA 470
Y L L +A
Sbjct: 124 YNSLLNSLCKA 134
>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Vitis vinifera]
Length = 666
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 153/312 (49%), Gaps = 5/312 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
E L+ +DRM RE V +N L+ C+++ + +A SVF ++ ++ PN +T
Sbjct: 334 EALDFWDRMIREGVVP----NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ G+ ++GD+ ++ M+ G P+VV Y +D C+ F A L E M+
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T T I G + A ++FD+M P+ YN ++ SL++ R
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ +ME + I + VTY+T+ +G + L +L +M+ P TV +++
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+C +V++ + L L + P A L++G+C+ EEA ++ML
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629
Query: 456 SEASYRMLQRYL 467
+ A++ +L R+L
Sbjct: 630 NVATWNVLVRHL 641
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 152/340 (44%), Gaps = 6/340 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ + K ++EE + D M + GI + ++ A ++ + +V K+
Sbjct: 252 LINGVCKEYTFEEAFQLLDEMMNK---GIDP-NVISYTTIINALSDAGNVELSLAVLAKM 307
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+R +PN T L+ GF G F+ M+ G P+VV YN + G C K
Sbjct: 308 FARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSL 367
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA+ +F +ME C P+++T + LI G ++ A ++++ M P++ AY M
Sbjct: 368 GDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM 427
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ L R N A L++ M+ + + VT++T GL S ++ K++D+M
Sbjct: 428 VDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGC 487
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T T L+ + R L + RG + + ++ G C G EA E
Sbjct: 488 FPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALE 547
Query: 444 CSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLEDLDRM 482
+M+VR + + + + Y Q N ++ +DR+
Sbjct: 548 LLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRL 587
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 178/455 (39%), Gaps = 81/455 (17%)
Query: 65 SSTLVE-NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
SS L E +VL RL H L ALE+FK F TP ++ + LA R D
Sbjct: 38 SSVLKEADVLKRLKHEHDITL-ALEYFKSIANSKSFKHTPLTYQMMIEKLASEREMDCVQ 96
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQ---SYEETLEAFDRME-------------- 166
L+ ++ S S + +S I ++ S E+ L+ F RM+
Sbjct: 97 YLLQQMKLEGISC----SEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHI 152
Query: 167 -------------REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
I+ ++K G E +N+LL+A C + A + V++ S+
Sbjct: 153 LDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGC 212
Query: 210 -PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ + L+ + G V E+ + F PSV YN I+G CK+ F +A +
Sbjct: 213 DPDEVSYTTLISSLCKLGKVKEAR----ELAMS-FTPSVPVYNALINGVCKEYTFEEAFQ 267
Query: 269 LFEEMERV-----------------------------------ACLPSLQTITTLIHGAG 293
L +EM C P+L T T+LI G
Sbjct: 268 LLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFF 327
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
L H+A +D M + + P++ AYNA++ L R L A+ + ++ME +
Sbjct: 328 LKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVR 387
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + G K+ L+G ++++ MI P ++ C N + L +
Sbjct: 388 TYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENM 447
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ + + GLC GR + A + QM
Sbjct: 448 QVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQM 482
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 106/264 (40%), Gaps = 9/264 (3%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ W M HP+++ M +L R S F +A+ +E + V +
Sbjct: 407 EVWNWMI-THGCHPNVVAYTCMVDVLCRNSMFN------QAYCLIEN-MQVENCPPNTVT 458
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ C + A VF ++ S PN T N LL + +M
Sbjct: 459 FNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDME 518
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG ++VTYN I GYC G G+A+ L +M P T+ +I ++
Sbjct: 519 HRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVN 578
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A QL D + PDI AY ++IS + + A+ + M + I + T++ +
Sbjct: 579 IAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKF 383
L + G G + D ++ F
Sbjct: 639 RHLFSNMGHSGAVQFLDAVLGSGF 662
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 49/248 (19%), Positives = 94/248 (37%), Gaps = 40/248 (16%)
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
++ ++ +M L G S + I Y + G A++ F M+ P+++
Sbjct: 91 EMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYN 150
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
++ ++ M K ++P++ YN ++ +L + ++ A +L+ EM K
Sbjct: 151 HILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSK 210
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D V+Y T+ + +CKL GK V + R + M
Sbjct: 211 GCDPDEVSYTTL---------ISSLCKL------GK-VKEARELAM-------------- 240
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
F P + L+ G+C +EEAF+ +M+ + + SY +
Sbjct: 241 ----------SFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINA 290
Query: 467 LVQANANE 474
L A E
Sbjct: 291 LSDAGNVE 298
>gi|334187687|ref|NP_197005.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|223635761|sp|Q9LFQ4.2|PP383_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g15010, mitochondrial; Flags: Precursor
gi|332004721|gb|AED92104.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 572
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 204/450 (45%), Gaps = 15/450 (3%)
Query: 20 LALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAA 79
L S S ++ +I++++ D + L L + P S+ LV +L R+
Sbjct: 84 LGCSISDELVSEDVGKISKLVKDCGSDRKELRNKLEE--CDVKP-SNELVVEILSRV--- 137
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
++ A FF + + + + + + IL +MR FD AW L+ +++ PSL+
Sbjct: 138 RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNS 197
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+++ IM+ + + + F +R + G ++F LL A C K + +A
Sbjct: 198 QTLLIMIRKYCAVHDVGKAINTFHAYKRFKL----EMGIDDFQSLLSALCRYKNVSDAGH 253
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKES-GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ ++ + K+ NI+L G+ G E + EM G + VV+Y+ I Y
Sbjct: 254 LIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYS 313
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM-PKRNLKPDI 317
K G ++LF+ M++ P + ++H + +AR L M ++ ++P++
Sbjct: 314 KGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNV 373
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN++I L + R A ++ DEM EK + TYH F ++++ E V +L +
Sbjct: 374 VTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA-FMRILRTG--EEVFELLAK 430
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M + P T +ML++ C D L LW + ++ P + +++ GL G+
Sbjct: 431 MRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK 490
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
EEA+ K+M + + +E M+Q +
Sbjct: 491 IEEAYGYYKEMKDKGMRPNENVEDMIQSWF 520
>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 636
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 201/457 (43%), Gaps = 32/457 (7%)
Query: 55 LQHLPQTTPLSSTLVEN-VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
HL +T P SS + N +LG L +++N L+ TP F ++
Sbjct: 54 FNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCY 113
Query: 114 ARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQ------------------ 153
M + A+ +M+ + + P +T ++ L K +
Sbjct: 114 CHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQ 173
Query: 154 -SYEETLEAFDR---------MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
SY + + M R+I + K +N ++ + C K + +A ++ +
Sbjct: 174 FSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQ 233
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ +P+ T + L+ GF G + + EMVL+ P T+NI +D CK+G
Sbjct: 234 MIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGN 293
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A + M + +P++ T ++L+ G LV +++A+ + + + + P+ +Y
Sbjct: 294 LKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCT 353
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
MI+ + + ++ A+ L ++M+ K I D VTY+++ GL KS + +L D M +
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
T L+ C N VD + L + D+G P + ++L+ GLC GR + A
Sbjct: 414 QPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQ 473
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ + +L + V+ +Y ++ L + ++ E L
Sbjct: 474 DVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEAL 510
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 168/408 (41%), Gaps = 40/408 (9%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D +H+ RT P+ ++ I+ S + ++ T + R R F GI
Sbjct: 48 DNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSR--RLEFHGITP-DIF 104
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L+ +C EM A S+ K+L + P+ T N L+ G +G V F+ +
Sbjct: 105 TFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHV 164
Query: 239 VLRGFRPSVVTYNIRIDGYCKKG-------------------------------C----F 263
+ GF +Y I+G CK G C
Sbjct: 165 LALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLV 224
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L+ +M P + T + LI+G +V + +A LF EM +N+ PD +N +
Sbjct: 225 IDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNIL 284
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ +L + +L A ++ M ++ + + VTY ++ G + + + + + +
Sbjct: 285 VDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGA 344
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P + ++ FC VD L+L+ + +G P + L+ GLC GR A+E
Sbjct: 345 APNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWE 404
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+M + + +Y L L + + ++ L + IK+ Q + P
Sbjct: 405 LVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKD-QGIQP 451
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/374 (21%), Positives = 157/374 (41%), Gaps = 10/374 (2%)
Query: 106 FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L + + A+EL S + ++ P ++T ++ I F + EAF
Sbjct: 211 YNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSAL------IYGFCIVGQLEEAFG 264
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ I FN+L+ A C + +K A+++ V ++ PN T + L+ G+
Sbjct: 265 LFREMVLKNINP-DYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGY 323
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
V + + + G P+ +Y I+G+CK +A+ LF +M+ P
Sbjct: 324 CLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDK 383
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +LI G I A +L DEM +I YN +I +L + ++ A+ L+ +
Sbjct: 384 VTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKK 443
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
++++ I D T++ + +GL K L+ ++ ++ + T +++ C
Sbjct: 444 IKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGL 503
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
D L + D G P + L+ L + E+A + ++M+ R + M
Sbjct: 504 FDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARDVVYALEGLEM 563
Query: 463 LQRYLVQANANEKL 476
+ +A EK
Sbjct: 564 VLHLESEAKDQEKF 577
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/208 (22%), Positives = 86/208 (41%), Gaps = 9/208 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMS 143
+AL F +Q P + + L + AWEL+ + P+ + + +
Sbjct: 366 EALSLFN-DMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPA--NIFTYN 422
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K ++ + +++ + GI+ FN+L+ C +K A+ VF
Sbjct: 423 CLIDALCKNHHVDQAIALVKKIKDQ---GIQP-DMYTFNILIYGLCKVGRLKNAQDVFQD 478
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
LLS+ ++ N T NI++ G + G E +M G P VTY I K
Sbjct: 479 LLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDE 538
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIH 290
A +L EM + +L+ + ++H
Sbjct: 539 NEKAEKLLREMIARDVVYALEGLEMVLH 566
>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1603
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 141/284 (49%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++ A+ F ++ + P+ T N LL G+ ++G++ + + ++
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNI IDGYC+ G +A L EEM CLP++ T T L+ G+ VR++
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLA 1347
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+ FDEM + L+PD AYN I + + D+ A EL + + + I D VTY+ +
Sbjct: 1348 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILI 1407
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ +L +M+ P T L+ C + ++ +I G
Sbjct: 1408 HGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 1467
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P +++ C RG A+ ++ML + +E +Y +L
Sbjct: 1468 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 1511
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S F ++ S AP+ K N +L +++ + + EM+ G PS+VTYN +D +
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 258 CKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
K+G L +EME CLP+ T +I G ++ +A +L + M + + K
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKA 1188
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
YN +I+ L+ + +L EME + I VTY+ M GL++S +E +
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M +P T L+ +C + L L+G L G P ++L+ G C
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308
Query: 436 GRWEEA 441
G EEA
Sbjct: 1309 GDLEEA 1314
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%)
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V +L + + T NIL+ G ++G++ + +MV G +P +TY I +C++G
Sbjct: 1390 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 1449
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A ++F M LPS T T +IH N++ A F +M + ++P+ YN
Sbjct: 1450 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 1509
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I +L R A EM E+ + + TY + G K E + Y M +
Sbjct: 1510 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 1569
Query: 382 KFVPKTRTVVMLMKFF 397
P T L+K F
Sbjct: 1570 GIHPDYLTHKALLKGF 1585
>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
Length = 651
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 116/477 (24%), Positives = 201/477 (42%), Gaps = 48/477 (10%)
Query: 47 DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAF 106
D + LL+ + + +V L + ++ALE F+ + P +
Sbjct: 24 DLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD--CAPDVMTY 81
Query: 107 EKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+H L + FD+A ++ + + P +T S ++ + KF S E+ AF
Sbjct: 82 TALVHALCKAGKFDEAQGMLREMIARGCAPDTVTF---STLIDGLCKFGSEEQ---AFRV 135
Query: 165 MEREIFVGI---------------RKFGSEE--------------------FNVLLQAFC 189
+E I G+ K+ S E FN+++ FC
Sbjct: 136 LEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFC 195
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
K++ A + ++ + PN T IL+ G ++ V + +MV G P+VV
Sbjct: 196 KAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVV 255
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY+ I+G CK+G DA LF+ MER C P++ T LI G + I +ARQL+ M
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN-VTYHTMFFGLMKSSG 367
+ PDI YN++I L + ++ A +L + E + N VTY T+F G
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ C+++ +++ F P T L+ +C R + L + +GF P + L
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLEDLDRMI 483
++ GL E A + M R Y ++ + +A+ N+ L L+++I
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVI 492
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 108/241 (44%), Gaps = 2/241 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T IL+ GF +GD+ EM GF + V + + G C G +A+
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F M + C P + T T L+H +A+ + EM R PD ++ +I L +
Sbjct: 67 FRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM-KSSGLEGVCKLYDRMIEGKFVPKTR 388
A +++++ ++ +G+ + + T+ L K + +E K+ +I F P
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVL 185
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+++ FC +D L +I++G P+ +L+TGLC R EA + ++M
Sbjct: 186 MFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKM 245
Query: 449 L 449
+
Sbjct: 246 V 246
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 84/411 (20%), Positives = 168/411 (40%), Gaps = 57/411 (13%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+P + ++ L + D A+EL ++R + P+++T +I++ + K + EE
Sbjct: 251 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVT---HNILIDGLCKAKRIEE 307
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPN 211
+ + RM R+ G +N L+ C ++ EA +F + A N
Sbjct: 308 ARQLYHRM--------RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAAN 359
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T + L G+ G + + +V +GF P + TY I YCK + + L E
Sbjct: 360 AVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVE 419
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM P + T++ ++ G + +A QLFD M R D YN ++ + R
Sbjct: 420 EMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARAS 479
Query: 332 DLNAAMELMDEMEEKR--------------------IGHDN------------------V 353
N A+ +++++ +KR +G +
Sbjct: 480 KHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVS 539
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+Y+ + GL + + ++++ M+ P+ TV +++ + C +VD L +
Sbjct: 540 SYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 599
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
G CP + L+ G C GR + A + ++M + ++ ++ +L+
Sbjct: 600 SKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLLE 650
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/161 (23%), Positives = 70/161 (43%), Gaps = 2/161 (1%)
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P+ Y +I DL+ A++L++EM+ + V + T+ GL + + +
Sbjct: 7 PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ R + P T L+ C + D + +I RG P L+ GLC
Sbjct: 67 F-RAMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE 474
G E+AF + ++ R S+A++ ++QR + N+ E
Sbjct: 126 FGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVE 166
>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
Length = 399
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 13/336 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMS 143
A++ + Q P PTP + +H L + +A E++ +++ P ++T ++
Sbjct: 37 AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTL- 95
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K +E + D MER F +N L+ + EA V
Sbjct: 96 --IAGLCKAGRLDEAQQVLDEMERSGFAA----NLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGC 262
+ + P+ +T N ++ GF +SG++ F EM R G P TY+I I+G CK
Sbjct: 150 MTT--TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207
Query: 263 FGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A L +EM R C S+ TL+ G +++ +AR+L M + PD+ Y+
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L RC D++ L+++M + D VTY + GL K+ + C+L RM+E
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
P T ++ C ++D+ +L + D+G
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 8/309 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N + A C ++ EA V VK + A P+ T N L+ G ++G + + EM
Sbjct: 57 YNFFVHALCKSGKVPEAMEV-VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM 115
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
GF ++VTYN I+G G G+A+ + + M P QT +IHG I
Sbjct: 116 ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEI 172
Query: 299 HQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYH 356
+A +EM +R PD Y+ +I+ L + +L A EL+ EM K V ++
Sbjct: 173 DRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G K+ L+ +L M+E P T ++ C VD G L ++ R
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSR 292
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P +LVTGLC G+ EA K+ML + +Y ++ L + + +
Sbjct: 293 GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMA 352
Query: 477 EDLDRMIKN 485
DL I++
Sbjct: 353 NDLLTSIRD 361
>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
Length = 694
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 90/323 (27%), Positives = 152/323 (47%), Gaps = 8/323 (2%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
++ LM P+L+T SM ++ + K E + FD M RE
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSM---VNGLCKAGRMEGARKVFDEMVREGLAP----DVV 259
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N LL +C + E+ +VF ++ R P+ T L+ ++G++ +M
Sbjct: 260 SYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQM 319
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG R + VT+ IDG+CKKG DA+ EEM + PS+ LI+G + +
Sbjct: 320 RERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRM 379
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
AR+L EM + +KPD+ Y+ +IS + +L++A +L +M +K + D +TY ++
Sbjct: 380 DLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSL 439
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL + L C+L++ M++ P T L+ C V+ L+L +I +G
Sbjct: 440 IRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGV 499
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P +L+ GL R +EA
Sbjct: 500 LPDVVTYSVLINGLSKSARTKEA 522
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL---SRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N L+ AFC E+ A V V L+ PN T N ++ G ++G + + E
Sbjct: 190 YNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G P VV+YN + GYCK GC +++ +F EM + +P + T T+LIH N
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 298 IHQARQLFDEMPKRNLK-----------------------------------PDIGAYNA 322
+ QA L +M +R L+ P + YNA
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + ++ A EL+ EME KR+ D VTY T+ G K L+ +L +M++
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T L++ C R++ L+ ++ G P L+ G C G E+A
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 443 ECSKQML 449
+M+
Sbjct: 489 SLHDEMI 495
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC + + +A ++ P+ N L+ G+ + G + EM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ +P VVTY+ I GYCK G A +L ++M + LP T ++LI G + ++
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF+ M + ++PD Y +I + ++ A+ L DEM K + D VTY +
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT---------------RTVVMLMKFFCVNFRVD 404
GL KS+ + +L ++ VP ++VV L+K FC+ +
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 570
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ ++DR + G +L+ G C G +A KQML
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 114/259 (44%), Gaps = 6/259 (2%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+AP+ N +LL ++ + + F M+ G P+V TYNI + C +G +A+
Sbjct: 114 YAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 268 RLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+ +M C P+ T TL+ AG + + L E + N KP++ +N+M+
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMRE--EGNAKPNLVTFNSMV 230
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L + + A ++ DEM + + D V+Y+T+ G K L ++ M + V
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ C ++ + L + +RG + L+ G C +G ++A
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350
Query: 445 SKQMLVRRRQVSEASYRML 463
++M Q S Y L
Sbjct: 351 VEEMRKCGIQPSVVCYNAL 369
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
LL+ FC + MKEA V+ +L R + + +IL+ G G+V F+ +M+
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
GF P+ + + G ++G +A +++ + C P
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCP 654
>gi|9755668|emb|CAC01820.1| putative protein [Arabidopsis thaliana]
Length = 532
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 204/450 (45%), Gaps = 15/450 (3%)
Query: 20 LALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAA 79
L S S ++ +I++++ D + L L + P S+ LV +L R+
Sbjct: 44 LGCSISDELVSEDVGKISKLVKDCGSDRKELRNKLEE--CDVKP-SNELVVEILSRV--- 97
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
++ A FF + + + + + + IL +MR FD AW L+ +++ PSL+
Sbjct: 98 RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWTLIDEMRKFSPSLVNS 157
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+++ IM+ + + + F +R + G ++F LL A C K + +A
Sbjct: 158 QTLLIMIRKYCAVHDVGKAINTFHAYKRFKL----EMGIDDFQSLLSALCRYKNVSDAGH 213
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKES-GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ ++ + K+ NI+L G+ G E + EM G + VV+Y+ I Y
Sbjct: 214 LIFCNKDKYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGVKHDVVSYSSMISCYS 273
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM-PKRNLKPDI 317
K G ++LF+ M++ P + ++H + +AR L M ++ ++P++
Sbjct: 274 KGGSLNKVLKLFDRMKKECIEPDRKVYNAVVHALAKASFVSEARNLMKTMEEEKGIEPNV 333
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN++I L + R A ++ DEM EK + TYH F ++++ E V +L +
Sbjct: 334 VTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA-FMRILRTG--EEVFELLAK 390
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M + P T +ML++ C D L LW + ++ P + +++ GL G+
Sbjct: 391 MRKMGCEPTVETYIMLIRKLCRWRDFDNVLLLWDEMKEKTVGPDLSSYIVMIHGLFLNGK 450
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
EEA+ K+M + + +E M+Q +
Sbjct: 451 IEEAYGYYKEMKDKGMRPNENVEDMIQSWF 480
>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
Length = 399
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 153/336 (45%), Gaps = 13/336 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMS 143
A++ + Q P PTP + +H L + +A E++ +++ P ++T ++
Sbjct: 37 AMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTL- 95
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K +E + D MER F +N L+ + EA V
Sbjct: 96 --IAGLCKAGRLDEAQQVLDEMERSGFAA----NLVTYNTLINGLSSAGRSGEAVLVMQG 149
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGC 262
+ + P+ +T N ++ GF +SG++ F EM R G P TY+I I+G CK
Sbjct: 150 MTT--TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSN 207
Query: 263 FGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A L +EM R C S+ TL+ G +++ +AR+L M + PD+ Y+
Sbjct: 208 LRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYS 267
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L RC D++ L+++M + D VTY + GL K+ + C+L RM+E
Sbjct: 268 TIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLED 327
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
P T ++ C ++D+ +L + D+G
Sbjct: 328 GCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 138/309 (44%), Gaps = 8/309 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N + A C ++ EA V VK + A P+ T N L+ G ++G + + EM
Sbjct: 57 YNFFVHALCKSGKVPEAMEV-VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEM 115
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
GF ++VTYN I+G G G+A+ + + M P QT +IHG I
Sbjct: 116 ERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEI 172
Query: 299 HQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYH 356
+A +EM +R PD Y+ +I+ L + +L A EL+ EM K V ++
Sbjct: 173 DRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFN 232
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G K+ L+ +L M+E P T ++ C VD G L ++ R
Sbjct: 233 TLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSR 292
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P +LVTGLC G+ EA K+ML + +Y ++ L + + +
Sbjct: 293 GCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMA 352
Query: 477 EDLDRMIKN 485
DL I++
Sbjct: 353 NDLLTSIRD 361
>gi|297720523|ref|NP_001172623.1| Os01g0816000 [Oryza sativa Japonica Group]
gi|56785065|dbj|BAD82704.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|125572420|gb|EAZ13935.1| hypothetical protein OsJ_03862 [Oryza sativa Japonica Group]
gi|255673815|dbj|BAH91353.1| Os01g0816000 [Oryza sativa Japonica Group]
Length = 530
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 179/379 (47%), Gaps = 10/379 (2%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F++ P + P A L ILA+ R FD A L+ ++R+ SL + ++ +++ R
Sbjct: 134 FRWASAQPGYAPGRHACHSMLAILAKHRRFDDARALLDQMRRS--SLASPAAVMLLIRRY 191
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
+ + AF + +G R G EF+ LL A C K +++A + + F
Sbjct: 192 CAARDVAGAVAAFRALPN---LGFRP-GVAEFHGLLTALCRYKNVQDAEHLLLSSEKEFP 247
Query: 210 PNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
K+ N++L G+ V + F++ M ++G + VV+Y I + K G M+
Sbjct: 248 FETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAGSLDTVMK 307
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF M+ +P + +++ + +++A+ L M ++ + PD +N++I L
Sbjct: 308 LFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFNSLIRPLC 367
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ R + A +++D+M + + T+H + + S +E V L D+M E + P+
Sbjct: 368 KARQVQEARKMLDDMLGRGLSPSVRTFHALLD--VARSPIE-VFDLLDKMKELQCDPEMD 424
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +ML++ FC + D LW + G P A +L+ GL GR EE+ + ++M
Sbjct: 425 TFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKYYEEM 484
Query: 449 LVRRRQVSEASYRMLQRYL 467
+ + + M+Q +L
Sbjct: 485 KAKGFPPEKKTEEMIQAWL 503
>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
Length = 717
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 150/318 (47%), Gaps = 8/318 (2%)
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
LM P+L+T SM ++ + K E + FD M RE +N L
Sbjct: 212 LMREEGNAKPNLVTFNSM---VNGLCKAGRMEGARKVFDEMVREGLAP----DVVSYNTL 264
Query: 185 LQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L +C + E+ +VF ++ R P+ T L+ ++G++ +M RG
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
R + VT+ IDG+CKKG DA+ EEM + PS+ LI+G + + AR+
Sbjct: 325 RMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARE 384
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L EM + +KPD+ Y+ +IS + +L++A +L +M +K + D +TY ++ GL
Sbjct: 385 LIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLC 444
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ L C+L++ M++ P T L+ C V+ L+L +I +G P
Sbjct: 445 EEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVV 504
Query: 424 ALDLLVTGLCSRGRWEEA 441
+L+ GL R +EA
Sbjct: 505 TYSVLINGLSKSARTKEA 522
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL---SRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N L+ AFC E+ A V V L+ PN T N ++ G ++G + + E
Sbjct: 190 YNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G P VV+YN + GYCK GC +++ +F EM + +P + T T+LIH N
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308
Query: 298 IHQARQLFDEMPKRNLK-----------------------------------PDIGAYNA 322
+ QA L +M +R L+ P + YNA
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + ++ A EL+ EME KR+ D VTY T+ G K L+ +L +M++
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T L++ C R++ L+ ++ G P L+ G C G E+A
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488
Query: 443 ECSKQML 449
+M+
Sbjct: 489 SLHDEMI 495
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC + + +A ++ P+ N L+ G+ + G + EM
Sbjct: 331 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 390
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ +P VVTY+ I GYCK G A +L ++M + LP T ++LI G + ++
Sbjct: 391 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 450
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF+ M + ++PD Y +I + ++ A+ L DEM K + D VTY +
Sbjct: 451 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 510
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT---------------RTVVMLMKFFCVNFRVD 404
GL KS+ + +L ++ VP ++VV L+K FC+ +
Sbjct: 511 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 570
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ ++DR + G +L+ G C G +A KQML
Sbjct: 571 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 615
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 113/257 (43%), Gaps = 2/257 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+AP+ N +LL ++ + + F M+ G P+V TYNI + C +G +A+
Sbjct: 114 YAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAV 172
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISS 326
+ +M C P+ T TL+ + A ++ M + N KP++ +N+M++
Sbjct: 173 GVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNG 232
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + + A ++ DEM + + D V+Y+T+ G K L ++ M + VP
Sbjct: 233 LCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPD 292
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C ++ + L + +RG + L+ G C +G ++A +
Sbjct: 293 VVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVE 352
Query: 447 QMLVRRRQVSEASYRML 463
+M Q S Y L
Sbjct: 353 EMRKCGIQPSVVCYNAL 369
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 3/99 (3%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
LL+ FC + MKEA V+ +L R + + +IL+ G G+V F+ +M+
Sbjct: 558 ALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRS 617
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
GF P+ + + G ++G +A +++ + C P
Sbjct: 618 GFSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCP 654
>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
Length = 688
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 144/290 (49%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++ A+ F ++ + P+ T N LL G+ ++G++ + + ++
Sbjct: 313 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 372
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNIRIDGYC+ G +A L EEM CLP++ T T L+ G+ V ++
Sbjct: 373 RAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLA 432
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+ FDEM + L+PD AYN I + + D+ A+EL + + + I D VTY+ +
Sbjct: 433 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILI 492
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ +L +M+ P T L+ C + ++ +I G
Sbjct: 493 HGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLL 552
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P +++ C RG A+ ++ML + +E +Y +L L +
Sbjct: 553 PSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 602
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 111/246 (45%), Gaps = 4/246 (1%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S F ++ S AP+ K N +L +++ + + EM+ G PS+VTYN +D +
Sbjct: 155 SAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSF 214
Query: 258 CKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
K+G L +EME CLP+ T +I G ++ +A +L + M + + K
Sbjct: 215 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKA 273
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
YN +I+ L+ + +L EME + I VTY+ M GL++S +E +
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M +P T L+ +C + L L+G L G P ++ + G C
Sbjct: 334 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRL 393
Query: 436 GRWEEA 441
G EEA
Sbjct: 394 GDLEEA 399
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 88/196 (44%)
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V +L + + T NIL+ G ++G++ + +MV G +P +TY I +C++G
Sbjct: 475 VLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERG 534
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A ++F M LPS T T +IH N++ A F +M + ++P+ YN
Sbjct: 535 LLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYN 594
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I +L R A EM E+ + + TY + G K E + Y M +
Sbjct: 595 VLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQN 654
Query: 382 KFVPKTRTVVMLMKFF 397
P T L+K F
Sbjct: 655 GIHPDYLTHKALVKGF 670
>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 643
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 107/420 (25%), Positives = 183/420 (43%), Gaps = 8/420 (1%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S++V ++L R G A E F ++ P + F L + ++ + W L
Sbjct: 165 SSIVFDMLIRACCELKRGDDAFECFDM-MKEKGVVPKIETFNAMLSLFLKLNQTETVWVL 223
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
+ + R T+ + +IM++ + K ++ + ME +G+ K +N ++
Sbjct: 224 YAEMFRLKIKS-TVYTFNIMINVLCKEGKLKKAKDFIGSMEN---LGV-KPNVVTYNTVI 278
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+C++ ++ AR V + +R P++ T L+ G + G + +M G
Sbjct: 279 HGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLL 338
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ VTYN IDGYC KG A +EM R A LP++ T LIH L + +A +
Sbjct: 339 PTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGM 398
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+M + PD YN +I+ RC + A L DEM K I VTY ++ + L K
Sbjct: 399 IKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSK 458
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L++++I P L+ C N +D L + R P
Sbjct: 459 RNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVT 518
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMI 483
+ L+ G C G+ EEA E K+M R + SY ++ Y + + N+ D M+
Sbjct: 519 YNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEML 578
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 128/268 (47%), Gaps = 8/268 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A + +M EA + + S P++ T NIL+ G+ G+ + EM+
Sbjct: 379 YNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMI 438
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P++VTY I K+ A LFE++ R P L LI G N+
Sbjct: 439 SKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLD 498
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD--LNAAMELMDEMEEKRIGHDNVTYHT 357
+A L EM KRN+ PD YN ++ RCR+ + A EL+ EM+ + I D+++Y+T
Sbjct: 499 RAFALLKEMDKRNIVPDEVTYNTLMQG--RCREGKVEEARELLKEMKRRGIRPDHISYNT 556
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K + + D M+ F P T L++ C N + DL L ++ +G
Sbjct: 557 LISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKG 616
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECS 445
P L+ G+ G+ +++ E S
Sbjct: 617 ITPDDSTYFSLIEGI---GKVDDSSEAS 641
>gi|255568998|ref|XP_002525469.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223535282|gb|EEF36959.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 581
Score = 132 bits (331), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 113/428 (26%), Positives = 186/428 (43%), Gaps = 23/428 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S LV VL R+ ++ A FF + + ++ + + + IL +MR FD AW
Sbjct: 125 VSRELVLEVLSRI---RNDWEAAFTFFLWAGRQLGYSHSVREYHAMISILGKMRKFDTAW 181
Query: 124 ELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
L+ ++ +T SL+T +++ IM+ + + F +R F G +EF
Sbjct: 182 ALIDEMRGVKTGISLVTPQTLLIMIRKYCAVHDVGRAINTFYAHKRFKF----DLGIDEF 237
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES-GDVTAMEMFYHEMVL 240
LL A C K +++A + F N K+ NI+L G+ G + + EM
Sbjct: 238 QSLLSALCRYKNVQDAEHLMFCNKDVFPFNTKSFNIVLNGWCNVIGSPREADRIWREMCK 297
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R VV+Y I Y K G +L+ +M+ V P + ++I R++ +
Sbjct: 298 RRIHYDVVSYASIISCYSKAGNLYKVFKLYNQMKEVGIEPDRKIYNSVIFALAKGRHVSE 357
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV--TYHTM 358
A L M ++ + P+ YN++I L R R ++ A L DEM + GH TYH
Sbjct: 358 AINLMKTMEEKGIAPNTVTYNSLIKPLCRARKIDEARGLFDEMLQH--GHSPTIRTYHAF 415
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
F L E V L + M + P T +ML++ FC + D LW + + G
Sbjct: 416 FRSLRTG---EEVFALLENMRKLGCHPTIDTYIMLIRKFCRWRQFDDVFKLWNQISENGL 472
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE---- 474
P + +L+ GL G+ EEA++ M ++ MLQ +L E
Sbjct: 473 GPDRSSYIVLIHGLFLNGKLEEAYKFYADMKEKQLLPDPKLDEMLQTWLSNKQVAECQMT 532
Query: 475 --KLEDLD 480
K++ LD
Sbjct: 533 ESKVDQLD 540
>gi|357480939|ref|XP_003610755.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355512090|gb|AES93713.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 596
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 108/408 (26%), Positives = 187/408 (45%), Gaps = 16/408 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S++LV VL R ++ + A FF + + + +P+ + + IL + + FD W
Sbjct: 175 VSNSLVMQVLKRF---GNDWVAAYGFFIWAKKQTPYVHSPEVYNLMVDILGKAKEFDLMW 231
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
+L+ ++R + L +MS ++ R +K Q +E+ +EAF G+ K+G E+
Sbjct: 232 KLVKEMKRIE-GYVCLDTMSKVMRRFAKAQRHEDAVEAFR--------GMGKYGVEKDTA 282
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N LL A + ++ A +V + S ++ + NIL+ G+ + + E
Sbjct: 283 ALNKLLDALVKGQSIEIAHNVLDEFKSSVPLSSPSFNILINGWCKVRNFEKARKVMEERK 342
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P V TYN I+ YC F + EEM C P+ T T L+ G G +
Sbjct: 343 EHGFEPDVFTYNNFIESYCHDKDFRKVDEVLEEMRGNGCPPNAVTYTILLLGYGKAGQLS 402
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + ++ M K + PD Y++++ L + L A E+ D+M ++ + D VTY+TM
Sbjct: 403 KALEEYERMKKDGIVPDTPFYSSLMYILGKAGRLKDACEVFDDMPKQGVVRDVVTYNTMI 462
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
S E +L M E P +T L+K C R+ + L ++ C
Sbjct: 463 STACAHSKEETALRLLKEMEETSCKPDLQTYHPLLKMCCKKKRMKVLKFLLDHMFKHDLC 522
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
P LLV L + G+ EA ++M+ + E + ++L R L
Sbjct: 523 PDRGTYTLLVQSLSNSGKLVEACTFFEEMVSKGFTPMETTVKLLTRKL 570
>gi|356531098|ref|XP_003534115.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/389 (26%), Positives = 173/389 (44%), Gaps = 20/389 (5%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY---- 118
PLS+ LV L RL + AL FF + ++ P A+ + IL+ RY
Sbjct: 20 PLSTPLVTGGLHRL---RYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQ 76
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR---K 175
F +++ +++R + +++ + + ++L + + + Y ++ F + +R IR +
Sbjct: 77 FRIVCDVLEYMKRNNRTMVPAEVLLVILRKYT--EKYLTHMQKFAKKKR-----IRVKTQ 129
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN+LL A C +++A S++ K+ PN +T NIL+ G+ + T
Sbjct: 130 LEINAFNLLLDALCKCCLVEDAESLYKKMRKTVKPNAETYNILVFGWCRVRNPTRGMKLL 189
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL---PSLQTITTLIHGA 292
EM+ G RP TYN ID YCK G +A+ LFE M P+ +T +I
Sbjct: 190 EEMIELGHRPDNFTYNTAIDTYCKTGMITEAVDLFEFMRTKGSTISSPTAKTYAIIIVAL 249
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +L M PD+ Y +I + C ++ A + ++EM K D
Sbjct: 250 AQHDRMEDCFKLIGHMISSGCLPDVTTYKEIIEGMCMCGKIDEAYKFLEEMGNKSYRPDI 309
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+ L + E KLY RMIE +P +T ML+ F D W
Sbjct: 310 VTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEMDDPDGAFETWQE 369
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +RG P +++ GL + + E+A
Sbjct: 370 IDNRGCRPDTDTYCVMIEGLFNCNKMEDA 398
>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
Length = 529
Score = 132 bits (331), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 139/290 (47%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ FC + + A VF ++ + PN T NIL+ G G V +MV
Sbjct: 231 YNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMV 290
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+VVT+N+ I+G+CK +A+ LF +ME+ P+ T TTLI +
Sbjct: 291 SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRME 350
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L++ M R + P++ YN +I+ L R D+ AA LM+EM K++ D VTY+ +
Sbjct: 351 DAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILI 410
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K KL D M E P T LM +C + L + + +G
Sbjct: 411 DSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQ 470
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++L+ G C +GR E+A +ML R + +Y +++ +++
Sbjct: 471 ANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMME 520
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 138/287 (48%), Gaps = 4/287 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAM---EMFYH 236
FN+++ C ++ A V + + +PN T N L+ G+ + G + M +
Sbjct: 158 FNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILK 217
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV +G P+ VTYNI IDG+CK AMR+F EM+R P++ T LI+G
Sbjct: 218 EMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDG 277
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A L D+M +L+P++ +N +I+ + + +N A+ L ++ME++ + + +TY
Sbjct: 278 KVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYT 337
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ K +E LY+ MI+ P+ T L+ C V +L ++ +
Sbjct: 338 TLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSK 397
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++L+ LC +G +A + +M + S +Y L
Sbjct: 398 KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTL 444
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 146/299 (48%), Gaps = 9/299 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ +I++ K ++ + F M+R+ G+R +N+L+ C+ ++ EA ++
Sbjct: 230 TYNILIDGFCKDENVSGAMRVFGEMQRQ---GLRP-NVVTYNILINGLCSDGKVDEAVAL 285
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++S PN T N+L+ GF ++ V +++M +G P+ +TY ID YCK
Sbjct: 286 RDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCK 345
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR--NIHQARQLFDEMPKRNLKPDI 317
G DA L+ M P + T LI AGL R ++ AR L +EM + L D+
Sbjct: 346 DGRMEDAFALYNMMIDRGIFPEVSTYNCLI--AGLCRKGDVKAARSLMNEMVSKKLSADV 403
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN +I SL + + A++L+DEM EK + +VTY+T+ G + L + R
Sbjct: 404 VTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTR 463
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M T +L+K FC+ R++ L +++RG P+ +++ + +G
Sbjct: 464 MERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKG 522
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 143/306 (46%), Gaps = 5/306 (1%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL + E + V+ +++ R N + NI++ G + G + +M +
Sbjct: 124 NPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKV 183
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGD---AMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
G P+V+TYN IDGYCK G G A + +EM P+ T LI G N
Sbjct: 184 WGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDEN 243
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A ++F EM ++ L+P++ YN +I+ L ++ A+ L D+M + + VT++
Sbjct: 244 VSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNV 303
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K+ + L++ M + P T L+ +C + R++ L+ +IDRG
Sbjct: 304 LINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG 363
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-L 476
P + L+ GLC +G + A +M+ ++ +Y +L L + + K +
Sbjct: 364 IFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAV 423
Query: 477 EDLDRM 482
+ LD M
Sbjct: 424 KLLDEM 429
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/276 (21%), Positives = 102/276 (36%), Gaps = 73/276 (26%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ N LL G + + ME Y EM+ R +V+++NI ++G CK G
Sbjct: 122 SCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVG------------ 169
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR---- 329
+++A + ++M + P++ YN +I +
Sbjct: 170 -----------------------KLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRI 206
Query: 330 --------------------------------CRDLN--AAMELMDEMEEKRIGHDNVTY 355
C+D N AM + EM+ + + + VTY
Sbjct: 207 GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTY 266
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL ++ L D+M+ P T +L+ FC N V+ +NL+ +
Sbjct: 267 NILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK 326
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+G P+ L+ C GR E+AF M+ R
Sbjct: 327 QGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362
>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At3g22470, mitochondrial-like [Glycine max]
Length = 468
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 147/300 (49%), Gaps = 3/300 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C K + EA ++ ++ +R PN T N L+ F +G + HEM+
Sbjct: 153 YSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMI 212
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P V T++I ID CK+G +A ++F M ++ P++ + +I+G + +
Sbjct: 213 LKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 270
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM +N+ PD YN++I L + + +A+ LM+EM + D VTY ++
Sbjct: 271 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 330
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K+ L+ L+ +M E P T L+ C R+ L+ +L+ +G C
Sbjct: 331 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 390
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++++GLC G ++EA +M + ++ ++ R L + + N+K E L
Sbjct: 391 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 450
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 129/284 (45%), Gaps = 3/284 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++L+ FC +M + S+ K+L + PN T L+ G G+V + F+ ++V
Sbjct: 48 LSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVV 107
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ F+ + V+Y ++G CK G A++L +E + P++ + +I G + ++
Sbjct: 108 AQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVN 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L+ EM R + P++ YN +I + L A L+ EM K I D T+ +
Sbjct: 168 EAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILI 227
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +++ M++ P + +++ C RVD +NL ++ +
Sbjct: 228 DALCKEG--KNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMV 285
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC GR A +M R + +Y L
Sbjct: 286 PDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 329
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
++IF + + G +N+++ C K + EA ++ ++L + P+ T N L+ G
Sbjct: 238 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 297
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+SG +T+ +EM RG VVTY +D CK A LF +M+ P+
Sbjct: 298 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 357
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T T LI G + A++LF + + D+ Y MIS L + + A+ +
Sbjct: 358 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 417
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ME+ + VT+ + L + + KL MI
Sbjct: 418 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 455
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/216 (21%), Positives = 97/216 (44%), Gaps = 1/216 (0%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M ++G ++VT +I I+ +C G + L ++ ++ P+ T TTL+ G L
Sbjct: 35 QMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKG 94
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + D++ + + + +Y +++ L + + A++L+ +E++ + V Y
Sbjct: 95 EVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYS 154
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K + LY M + P T L+ FC+ ++ +L +I +
Sbjct: 155 AIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILK 214
Query: 417 GFCPHGHALDLLVTGLCSRGR-WEEAFECSKQMLVR 451
P + +L+ LC G+ ++ F QM V
Sbjct: 215 NINPDVYTFSILIDALCKEGKNAKQIFHAMVQMGVN 250
>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
Length = 524
Score = 131 bits (330), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 113/434 (26%), Positives = 189/434 (43%), Gaps = 30/434 (6%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P P LHP LL LP PL +T N++ R A ++ALE
Sbjct: 82 PIPVASLHP-LLSSLPSAPAFALFADIYRLRLPLCTTTF-NIMLRHLCATGKPVRALELL 139
Query: 91 KFTLQHPHFTPTPDAFEKTLHI---LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLS 147
+ P P+A I AR R A E+M ++ + + ++S
Sbjct: 140 RQM-------PRPNAVTYNTVIAGFCARGR-VQAALEVMREMRERGGIAPDKYTYATLIS 191
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
K E+ ++ FD M + G + +N L+ +C ++ A ++ R
Sbjct: 192 GWCKIGRMEDAVKVFDEM---LTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQR 248
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
A T N+L+ + EM GF P V TYNI I+GYCK+G A
Sbjct: 249 GIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKA 308
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ +FEEM + + T T+LI+ + + +LF+ K+ ++PD+ YNA+I+S
Sbjct: 309 LEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINS 368
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
D+ A E+M EME+KRI D++TY+T+ G L+ L D M + P
Sbjct: 369 HCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPD 428
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ L+ + + + L + ++D+GF P + L+ GLC + ++A K
Sbjct: 429 LVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMK 488
Query: 447 QMLVRRRQVSEASY 460
+M+ + +++Y
Sbjct: 489 EMVAKGITPDDSTY 502
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 102/216 (47%), Gaps = 1/216 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ +C + K+A VF ++ + T L+ F G V + ++ V
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G RP VV YN I+ +C G A + EME+ P T TL+ G L+ +
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR L DEM KR ++PD+ +YN +IS D+ A+ + DEM +K +TY+ +
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI 471
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
GL K + L M+ P T + L++
Sbjct: 472 QGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIE 507
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 120/256 (46%), Gaps = 3/256 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+N+L+ A +A +V ++ F+P+ T NIL+ G+ KE + A+E+F EM
Sbjct: 257 YNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVF-EEM 315
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G R + VTY I + +KG + RLF + P + LI+ ++
Sbjct: 316 SQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDM 375
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A ++ EM K+ + PD YN ++ L+ A L+DEM ++ I D V+Y+T+
Sbjct: 376 ERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTL 435
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G ++ ++ D M++ F P T L++ C + D NL ++ +G
Sbjct: 436 ISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGI 495
Query: 419 CPHGHALDLLVTGLCS 434
P L+ GL +
Sbjct: 496 TPDDSTYISLIEGLTT 511
>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
Length = 556
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 151/313 (48%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ +FC + +AR +++K++ P+ T L+ GF +G ++ EMV
Sbjct: 227 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 286
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+V T+N+ ID +C+KG +A +F M + P + T TLI G L N+
Sbjct: 287 NKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVL 346
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LFD + +R + PD+ +Y +I +C+ ++ A+ L +EM K + D V Y ++
Sbjct: 347 EARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLI 406
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L+ + P T +L+ FC +D+G+ L+ + +G
Sbjct: 407 DGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLT 466
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++L+ G C R EA M + +Y L L ++ ++ D
Sbjct: 467 PTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSG---RISDA 523
Query: 480 DRMIKNLQAVLPP 492
+ K + PP
Sbjct: 524 WELFKVMHVGGPP 536
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 82/326 (25%), Positives = 152/326 (46%), Gaps = 10/326 (3%)
Query: 155 YEETLEAFDRME-----REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL 205
Y +++F + E R++++ I G + + L++ FC + E + + +++
Sbjct: 227 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 286
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
++ PN T N+L+ F G + + ++ MV RG +P +VT+N I G+C G
Sbjct: 287 NKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVL 346
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A +LF+ + LP + + T LI G + I +A LF+EM +N+ DI Y+++I
Sbjct: 347 EARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLI 406
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A EL + + +TY+ + K ++ +L+ M
Sbjct: 407 DGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLT 466
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +L+ +C + R+ +NL + + P + L GLC GR +A+E
Sbjct: 467 PTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWEL 526
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
K M V V A+Y +L +A
Sbjct: 527 FKVMHVGGPPVDVATYNVLLDAFCKA 552
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/373 (21%), Positives = 153/373 (41%), Gaps = 41/373 (10%)
Query: 107 EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
++ IL+ D A L +H+ P L ++ + ++ + K + + +M
Sbjct: 53 KQNAKILSSFNGIDDAVTLFNHLINMQP-LPSVIQFNTIIGSVVKMKHCPVAISLLKQM- 110
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKES 225
+F G+ ++ + +C EM A SV +L R + PNN T+ ++ G +
Sbjct: 111 --VFKGVTP-SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCIN 167
Query: 226 GDVTAMEMFYHEMVLRGF-----------------------------------RPSVVTY 250
G+V F+ + +G +P++V Y
Sbjct: 168 GEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIY 227
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N+ ID +CK A L+ ++ + P + T T+LI G + +QL EM
Sbjct: 228 NMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVN 287
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+N+ P++ +N +I + R + A + + M ++ D VT++T+ G +
Sbjct: 288 KNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLE 347
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
KL+D + E +P + +L+ +C R+D ++L+ + + L+
Sbjct: 348 ARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLID 407
Query: 431 GLCSRGRWEEAFE 443
GLC GR A+E
Sbjct: 408 GLCKSGRISYAWE 420
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 85/195 (43%), Gaps = 7/195 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
S +I++ K + +E + F+ M + + + I + S L+ C + A
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSS-----LIDGLCKSGRISYAWE 420
Query: 200 VFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F + + P N T NIL+ F + D+ + M +G P+V+TYNI I+GYC
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K +AM L M+ P T +L G I A +LF M D+
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 540
Query: 319 AYNAMISSLIRCRDL 333
YN ++ + + +D+
Sbjct: 541 TYNVLLDAFCKAQDV 555
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 198 RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
R F K L F+ K +L F D A+ +F H + ++ PSV+ +N I
Sbjct: 38 RYAFHKFLRFFSHCPKQNAKILSSFNGIDD--AVTLFNHLINMQPL-PSVIQFNTIIGSV 94
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
K A+ L ++M PS+ T++ I+ + + A + + KR +P+
Sbjct: 95 VKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNN 154
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
++ L ++ AM+ D + + + D V Y T+ GL K +L
Sbjct: 155 ITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQE 214
Query: 378 MIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M EG+ V P M++ FC + +L+ ++D G P L+ G C G
Sbjct: 215 M-EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTG 273
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
+W E + +M+ + + ++ +L
Sbjct: 274 QWGEVKQLMCEMVNKNINPNVYTFNVL 300
>gi|357440039|ref|XP_003590297.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479345|gb|AES60548.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 661
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 160/320 (50%), Gaps = 20/320 (6%)
Query: 68 LVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
L EN++ RL + + K AL F++ H +F + +++ + IL RM+ D+ E++
Sbjct: 84 LSENLINRLLFRYKDDWKSALAIFRWAGSHSNFKHSQQSYDMMVDILGRMKAMDKMREIL 143
Query: 127 SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
+++ SL+TL +++ ++ R + +++ + FD ++ F+G+ K +E NVLL
Sbjct: 144 EEMRQ--ESLITLNTIAKVMRRFVGARQWKDAVRIFDDLQ---FLGLEK-NTESMNVLLD 197
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C +K +++AR ++++L APN T NIL+ G+ V EM G RP
Sbjct: 198 TLCKEKFVEQAREIYLELKHYIAPNAHTFNILIHGWCNIRRVEEAHWTIQEMKGYGCRPC 257
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
V++Y+ I YC++ F L +EM+ C P++ T TT++ +A Q+ +
Sbjct: 258 VISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKFEEALQVVE 317
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF------ 359
M +PD +N++I +L R ++ A + M + + + TY++M
Sbjct: 318 RMNAVGCRPDTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYNSMISMFCYY 377
Query: 360 ------FGLMKSSGLEGVCK 373
FG++K G+CK
Sbjct: 378 AQEERAFGILKEMEKSGLCK 397
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 114/287 (39%), Gaps = 37/287 (12%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
P ++ + + + FD+ ++L+ +Q + P+++T ++ L++ KF EE
Sbjct: 256 PCVISYSTIIQCYCQEQNFDRVYDLLDEMQAQNCSPNVVTYTTIMCALAKAEKF---EEA 312
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMN 216
L+ +RM VG R + FN L+ + +A VF + + APN T N
Sbjct: 313 LQVVERMNA---VGCRP-DTLFFNSLIYTLGRAGRIDDATHVFKVAMPKASVAPNTSTYN 368
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGF-RPSVVTYNIRIDGYCKKGCFGDAMR------- 268
++ F EM G +P + TY+ I K CF MR
Sbjct: 369 SMISMFCYYAQEERAFGILKEMEKSGLCKPDIQTYHPLI-----KSCF--KMREIDTWLN 421
Query: 269 --LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP---------DI 317
L + + + L T T LIHG A LF+EM +++ P D
Sbjct: 422 DILNDMVNKYHIGLDLSTYTLLIHGLYRADRCKWAFDLFEEMADQDIVPRYKTCRLLLDE 481
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
M ++++ D N + + E + + + T+FFG K
Sbjct: 482 VKQKNMHLAVVKIEDRNTGVMGISMKPENKKNDEGLKSGTIFFGRKK 528
>gi|356560073|ref|XP_003548320.1| PREDICTED: pentatricopeptide repeat-containing protein At1g73400,
mitochondrial-like [Glycine max]
Length = 466
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 104/389 (26%), Positives = 172/389 (44%), Gaps = 20/389 (5%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY---- 118
PLS+ LV VL RL + AL FF + ++ P A+ + IL+ RY
Sbjct: 20 PLSTPLVTGVLHRL---RYDEKIALRFFTWAGHQEDYSHEPCAYNDMMDILSSTRYKVKQ 76
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F +++ +++R + + + ++ + ++L + + + Y ++ F R R IR
Sbjct: 77 FRIVCDVLEYMKRNNKTTVPVEVLLVILRKYT--EKYLTHVQKFARKRR-----IRVKTQ 129
Query: 179 EE---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
E FN+LL A C +++A +++ K+ PN +T NI + G+ + T
Sbjct: 130 PEINAFNLLLDALCKCCLVEDAETLYKKMRKTVKPNAETYNIFVFGWCRVRNPTRGMKLL 189
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL---PSLQTITTLIHGA 292
EMV G RP YN ID YCK G +A+ LFE M P+ +T +I
Sbjct: 190 EEMVELGHRPDNFAYNTAIDTYCKAGMVTEAVDLFEFMRTKGSSISSPTAKTYAIIIVAL 249
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ + +L M PD+ Y +I + C ++ A + ++EM K D
Sbjct: 250 AQHDRMEECFKLIGHMISSGCLPDVTTYKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDI 309
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+ L + E KLY RMIE +P +T ML+ F D W
Sbjct: 310 VTYNCFLKVLCDNKKSEDALKLYGRMIELNCIPSVQTYNMLISMFFEIDDPDGAFETWQE 369
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +RG P +++ GL + + E+A
Sbjct: 370 MDNRGCRPDIDTYSVMIDGLFNCNKVEDA 398
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 68/164 (41%), Gaps = 1/164 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ C ++ EA ++ ++ + P+ T N L ++ Y M+
Sbjct: 277 YKEIIEGMCVCGKIDEAYKFLEEMGNKSYRPDIVTYNCFLKVLCDNKKSEDALKLYGRMI 336
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
PSV TYN+ I + + A ++EM+ C P + T + +I G +
Sbjct: 337 ELNCIPSVQTYNMLISMFFEIDDPDGAFETWQEMDNRGCRPDIDTYSVMIDGLFNCNKVE 396
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
A L +E+ + +K +++ + L DL A + + M
Sbjct: 397 DACFLLEEVINKGIKLPYKKFDSFLMQLSVIGDLQAIHRVSEHM 440
>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
Length = 471
Score = 131 bits (330), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 111/400 (27%), Positives = 177/400 (44%), Gaps = 23/400 (5%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETL 159
PDAF T I A D M H++ P+++T ++ +R K EE +
Sbjct: 22 APDAFTHTPIITAMANAGDLDGA-MDHLRSMGCDPNVVTYTALIAAFARAKKL---EEAM 77
Query: 160 EAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKT 214
+ + M R+ G +NVL+ A C + A+ V K++ FAPN T
Sbjct: 78 KLLEEM--------RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 129
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ GF + G+V MV +G RP+VVTY+ IDG CK F +A + EEM+
Sbjct: 130 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 189
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P T + LIHG I +A Q+ M PD+ Y+++I + + L
Sbjct: 190 ASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 249
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVML 393
A + + EM ++R D VTY+T+ GL K + + D+M E G +P T +
Sbjct: 250 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTV 309
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ C + + L + G P ++ GLC GR EEA + M
Sbjct: 310 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 369
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ +Y L L +A K+++ +R+++ ++ PP
Sbjct: 370 APNVVTYTTLISGLCKA---RKVDEAERVMEEMRNAGCPP 406
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 152/356 (42%), Gaps = 13/356 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P F + + D A +L+ + P+++T ++ L + KF +
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
E LE + V F ++ L+ C +++EA + ++ S P+
Sbjct: 183 EVLEEM----KASGVTPDAF---TYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ ++ F +SG + + EM + P VVTYN IDG CK G +A + ++M+
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295
Query: 276 VA-CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
LP + T +T+I+G + +A++L D M K PD+ Y +I L +C L
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ M+ + VTY T+ GL K+ ++ ++ + M P T ++
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415
Query: 395 KFFCVNFRVDLGLNLWGYLID-RGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
CV+ R+ L + D R C P +V L S +EA + +QM
Sbjct: 416 NGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 106/262 (40%), Gaps = 41/262 (15%)
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
+GD+ A EM GF P T+ I G AM + + + C P++ T
Sbjct: 3 AGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAM---DHLRSMGCDPNVVT 59
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T LI + + +A +L +EM +R P++ YN ++ +L + + AA +++ +M
Sbjct: 60 YTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM- 118
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
IEG F P T L+ FC VD
Sbjct: 119 ----------------------------------IEGGFAPNVMTFNSLVDGFCKRGNVD 144
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
L G ++ +G P+ L+ GLC ++ EA E ++M +Y L
Sbjct: 145 DARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALI 204
Query: 465 RYLVQANANEKLEDLDRMIKNL 486
L +A +K+E+ ++M++ +
Sbjct: 205 HGLCKA---DKIEEAEQMLRRM 223
>gi|297807523|ref|XP_002871645.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317482|gb|EFH47904.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 524
Score = 131 bits (330), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 100/405 (24%), Positives = 188/405 (46%), Gaps = 12/405 (2%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S+ LV +L ++ ++ A FF + + + + + + IL +MR FD AW
Sbjct: 75 SNELVVEILSQV---RNDWETAFTFFVWAGKQQGYVRSVREYHSMISILGKMRKFDTAWT 131
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L+ +++ PSL+ +++ IM+ + + + F +R + G ++F L
Sbjct: 132 LIDEMRKFSPSLVNSQTLLIMIRKYCAVHDVGKAINTFHAYKRFKL----EMGIDDFQSL 187
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES-GDVTAMEMFYHEMVLRGF 243
L A C K + +A + + + K+ NI+L G+ G E + EM G
Sbjct: 188 LSALCRYKNVSDAEHLIFCNKDTYPFDAKSFNIVLNGWCNVIGSPREAERVWMEMGNVGV 247
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+ VV+Y+ I Y K G ++LF+ M++ + P + +IH + +AR
Sbjct: 248 KHDVVSYSSMISCYSKGGSLNKVLKLFDRMKKESIEPDRKVYNAVIHALAKASFVSEARN 307
Query: 304 LFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L M ++ ++P++ YN++I L + R A ++ DEM EK + TYH F +
Sbjct: 308 LMKTMEEEKGMEPNVVTYNSLIKPLCKARKTEEAKQVFDEMLEKGLFPTIRTYHA-FMRI 366
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+++ E V +L +M + P T +ML++ C D L LW + ++G P
Sbjct: 367 LRTG--EEVFELLAKMRKMGCQPTVDTYIMLIRKLCRWRDFDNVLLLWNEMKEKGVGPDL 424
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ +++ GL G+ EEA+ K+M + + +E M+Q +
Sbjct: 425 SSYIVMIHGLFLNGKIEEAYGYYKEMKEKGMRPNENVEDMIQSWF 469
>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Cucumis sativus]
Length = 786
Score = 131 bits (329), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 109/404 (26%), Positives = 178/404 (44%), Gaps = 27/404 (6%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FFK+ F T +++ +H++ R R + A + + V IM
Sbjct: 146 ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEV--------------IM 191
Query: 146 LSRISKFQSYEETLEAFDRM--EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
SR+ FD + R I V GS F+VL F ++EA F +
Sbjct: 192 NSRMDMGFP---VCNIFDMLWSTRNICVS----GSGVFDVLFSVFVELGLLEEANECFSR 244
Query: 204 LLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + R P ++ N LL +SG+ + F+++M+ G PSV TYN+ ID CK+G
Sbjct: 245 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 304
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
++ RLF +M + P + T +LI G G V ++ + LF+EM PDI YN
Sbjct: 305 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 364
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + + A E EM+ + + VTY T+ K ++G KL+ M
Sbjct: 365 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTG 424
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T L+ C + L ++ G + L+ GLC GR EA
Sbjct: 425 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 484
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
E + ML ++ Y L ++A E++ED +++K +
Sbjct: 485 EVFRSMLKDGISPNQQVYTALVHGYIKA---ERMEDAMKILKQM 525
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL-GFKESGDVTAMEMFYHEMV 239
+ ++ C+Q++++E + + ++ SR N ++ ++ + ++G + F+ EM
Sbjct: 537 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 596
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTY + IDG CK G A+ F M + P++ T+LI G I
Sbjct: 597 DVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIE 656
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LFDEM R + PDI A+ A+I ++ +L A+ L+ M E I D Y ++
Sbjct: 657 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 716
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
G + L K ++ MIE +P+ + L++
Sbjct: 717 SGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/317 (23%), Positives = 141/317 (44%), Gaps = 41/317 (12%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
F+ + + ++A E S + R +L +S + +L R+SK + + + F+
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRM-RNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFND 279
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK 223
M I GI +NV++ C + +++ +R +FV++ +P+ T N L+ G+
Sbjct: 280 M---IGAGIAP-SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYG 335
Query: 224 ESGDVTAM-----EM------------------------------FYHEMVLRGFRPSVV 248
+ G + + EM ++ EM G +P+VV
Sbjct: 336 KVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVV 395
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY+ ID +CK+G A++LF +M R LP+ T T+LI N+ +A +L ++M
Sbjct: 396 TYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDM 455
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ +K +I Y A++ L + + A E+ M + I + Y + G +K+ +
Sbjct: 456 LQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERM 515
Query: 369 EGVCKLYDRMIEGKFVP 385
E K+ +M E P
Sbjct: 516 EDAMKILKQMTECNIKP 532
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 144/348 (41%), Gaps = 10/348 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T S+ + K S EE F+ M+ VG +N L+ +C ++
Sbjct: 322 PDVVTYNSL---IDGYGKVGSLEEVASLFNEMKD---VGCVP-DIITYNGLINCYCKFEK 374
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
M A F ++ + PN T + L+ F + G + + +M G P+ TY
Sbjct: 375 MPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTS 434
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
ID CK G +A +L +M + ++ T T L+ G + +A ++F M K
Sbjct: 435 LIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDG 494
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ P+ Y A++ I+ + AM+++ +M E I D + Y ++ +G LE
Sbjct: 495 ISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETK 554
Query: 373 KLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ + M G + ++ +F D LN + + D G +L+ G
Sbjct: 555 LILEEMKSRGISANPVISTTIIDAYFKAGKSSD-ALNFFQEMQDVGVEATIVTYCVLIDG 613
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
LC G E A + +ML Q + A Y L L + N E + L
Sbjct: 614 LCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKL 661
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 114/279 (40%), Gaps = 5/279 (1%)
Query: 168 EIFVGIRKFG--SEEFNV--LLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
++FV +R+ G EF L+ A C + EA + +L + N T LL G
Sbjct: 415 KLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGL 474
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
++G + E + M+ G P+ Y + GY K DAM++ ++M P L
Sbjct: 475 CKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDL 534
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
++I G R + + + + +EM R + + +I + + + A+ E
Sbjct: 535 ILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQE 594
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M++ + VTY + GL K+ +E + RM+ P L+ C N
Sbjct: 595 MQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNC 654
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ L+ + RG P A L+ G G +EA
Sbjct: 655 IESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEA 693
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 77/165 (46%), Gaps = 1/165 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ VL+ C ++ A F ++LS PN L+ G ++ + + + + EM
Sbjct: 607 YCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQ 666
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P + + IDG K G +A+ L M +A L T+L+ G +H
Sbjct: 667 CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 726
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
QAR+ F+EM ++ + P+ ++ + L+ A+EL +EME
Sbjct: 727 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 771
>gi|125551971|gb|EAY97680.1| hypothetical protein OsI_19602 [Oryza sativa Indica Group]
Length = 586
Score = 131 bits (329), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 98/405 (24%), Positives = 180/405 (44%), Gaps = 14/405 (3%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ----HPHFTPTPDAFEKTLHILARM 116
+ PLS TLV VL R AH + FF++ F T + K +HIL +
Sbjct: 178 SPPLSETLVLAVLDRFKHAHR---PSHRFFRWAAAAAAASGGFAHTTITYCKMVHILGKA 234
Query: 117 RYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
R F L+ + + L + + I + + + + F+ M F
Sbjct: 235 RQFQSMVALIQEMGKE--GALCMDAFKIAIKSFAAAGEIKNAVGVFEMMRTHGF----DD 288
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
G E FN LL A + +EA VF ++ R+AP+ ++ L+L + + ++ ++
Sbjct: 289 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 348
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ G +P VV +N I+G + +A+++FE M+ P++ T T LI
Sbjct: 349 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 408
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ A + F+EM +PD+ Y ++ + ++ L++EM +K D TY+
Sbjct: 409 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 468
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLID 415
+ L + + ++Y +MI+ P T M+MK +F +G +W +
Sbjct: 469 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 528
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+G CP ++ + + G GR EEA + ++M+ + + + Y
Sbjct: 529 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDY 573
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ER 275
I + F +G++ + M GF V ++N + ++G +A ++F+ M +R
Sbjct: 260 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR 319
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
A P L++ T L+ RN+ +A ++++EM + LKPD+ +N MI L+R +
Sbjct: 320 YA--PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 377
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+++ + M+ K + TY + K ++ + ++ M + P T L+
Sbjct: 378 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLV 437
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+ R+D L + +G P G + L+ L +R ++A K+M+ + +
Sbjct: 438 GYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 497
Query: 456 SEASYRMLQR 465
+ +Y M+ +
Sbjct: 498 TIHTYNMMMK 507
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/240 (22%), Positives = 101/240 (42%), Gaps = 8/240 (3%)
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQLF 305
+ I I + G +A+ +FE M +++ L+ GL R +A Q+F
Sbjct: 257 AFKIAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGR---EANQVF 313
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
D M R PD+ +Y A++ + R+L A + +EM E + D V ++TM GL++
Sbjct: 314 DRMRDR-YAPDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRG 372
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
K+++ M P T ML++ C ++D+ + + + D G P
Sbjct: 373 QRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATY 432
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
L+ G + R + ++M + +Y L + L N ++ +MIK
Sbjct: 433 TCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIK 492
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 81/178 (45%), Gaps = 2/178 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L++ C + +M A F ++ P+ T LL+G+ + + + EM
Sbjct: 397 YTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMT 456
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV-RNI 298
+G P TYN I + DA R++++M + P++ T ++ L RN
Sbjct: 457 QKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNY 516
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+++EM ++ + PD+ +Y I+ IR A + ++EM +K + + Y+
Sbjct: 517 MMGCAVWEEMHRKGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYN 574
>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
Length = 543
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 125/264 (47%), Gaps = 1/264 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C M+EAR + ++ R PN T N L+ G+ ++G M+
Sbjct: 211 YNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMI 270
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VVT+N I G+C+K A + M++ C P+L T LI G +
Sbjct: 271 QSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRAN 330
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L EM R + PDI YN++I R + A ++ + M E+ + D ++Y T+
Sbjct: 331 EACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLA 390
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L+KS + L D M + +P T LM+ C + R+D +L + G
Sbjct: 391 VALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCD 450
Query: 420 PHGHALDLLVTGLCSRGRWEEAFE 443
P ++LVTGLC GR ++A E
Sbjct: 451 PAASTYEVLVTGLCKAGRVDDAKE 474
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 137/271 (50%), Gaps = 8/271 (2%)
Query: 182 NVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
N LL+ + +A +F +LL + N T N L+ GF ++GD+ EM
Sbjct: 73 NCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMK 132
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P VVT++ + C G AM+ F E V C P L+HG +
Sbjct: 133 ERGHSPDVVTHSSIVQALCNTGNLSRAMQYFR--ESVECAPDSVLFNILVHGLCKANQLS 190
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ARQ+ +EM +R + PD+ YN++I L + + A +L++ M ++++ + VTY+T+
Sbjct: 191 EARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLI 250
Query: 360 FGLMKSSGLEGVC-KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+G K +G G+ +L +RMI+ P T L+ FC ++D + +L+ +G
Sbjct: 251 YGYCK-TGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVL-HLMKKGL 308
Query: 419 C-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C P+ ++L++GLC GR EA E +M
Sbjct: 309 CAPNLVTYNVLISGLCDAGRANEACELLSEM 339
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/304 (24%), Positives = 137/304 (45%), Gaps = 4/304 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC +M+ A + ++ R +P+ T + ++ +G+++ ++ E V
Sbjct: 108 YNTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESV 167
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V +NI + G CK +A ++ EEM +P + T +LI G +
Sbjct: 168 --ECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRME 225
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ARQL + M KR ++P++ YN +I + A +L++ M + D VT++++
Sbjct: 226 EARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLI 285
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + S ++ C++ M +G P T +L+ C R + L + RG
Sbjct: 286 SGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGIL 345
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLED 478
P + L+ C + E+AF+ M+ R SY L L+++ +E
Sbjct: 346 PDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFAL 405
Query: 479 LDRM 482
LD M
Sbjct: 406 LDNM 409
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/454 (19%), Positives = 167/454 (36%), Gaps = 90/454 (19%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD H +++Q L T LS +A+++F+ +++ P
Sbjct: 138 PDVVTHSSIVQALCNTGNLS-------------------RAMQYFRESVE---CAPDSVL 175
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
F +H L + +A +++ + P ++T S+ L + + + + LE
Sbjct: 176 FNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMV 235
Query: 164 RME--------REIFVGIRKFGSE--------------------EFNVLLQAFCTQKEMK 195
+ + + G K G FN L+ FC + ++
Sbjct: 236 KRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKID 295
Query: 196 EARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+A V L+ + APN T N+L+ G ++G EM RG P ++TYN
Sbjct: 296 KACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSL 354
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I +C+ F+ I QA Q+ + M +R +
Sbjct: 355 IGIFCRN---------FQ--------------------------IEQAFQIQNLMVERGV 379
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
PD +Y + +L++ + A L+D M + + T++++ GL S L+
Sbjct: 380 IPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARH 439
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L M P T +L+ C RVD + ++ G P + +V L
Sbjct: 440 LLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLA 499
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
G+ + A Q++ + + SY+ L ++
Sbjct: 500 REGKQDLALHYFDQVVAAESKACDPSYQKLLEFV 533
>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
Length = 841
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 152/307 (49%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K + +A ++ + +S R P+ T N L+ GF G + +++M
Sbjct: 336 YNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNKMT 395
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P V T++I +DG+CK G +A + M + + P + T ++L+ G LV ++
Sbjct: 396 SKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVN 455
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+ M R + ++ +YN MI+ + + ++ AM+L EM K+I D +TY ++
Sbjct: 456 KAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLI 515
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L D M P T ++ C VD + L L +G
Sbjct: 516 DGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIR 575
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P + +LV GLC G+ E+A + + +LV+ + +Y M+Q + + +E L
Sbjct: 576 PDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALAL 635
Query: 479 LDRMIKN 485
L +M +N
Sbjct: 636 LSKMEEN 642
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/354 (23%), Positives = 171/354 (48%), Gaps = 12/354 (3%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD + + + + ++ + A++L S +R P + T ++ + K + +
Sbjct: 331 PDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLK---DA 387
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
++ F++M + + F++L+ FC +KEA++V ++ + P+ T +
Sbjct: 388 IDLFNKMTSKNIIP----DVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +V E ++ M RG +V +YNI I+G+CK +AM+LF+EM
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T ++LI G I A +L DEM R +PDI YN+++ +L + ++ A+
Sbjct: 504 IFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAI 563
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ +++ + I D TY + GL +S LE K+++ ++ + ++++ F
Sbjct: 564 TLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGF 623
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C D L L + + G P ++++ L + + A + ++M++R
Sbjct: 624 CDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMR 677
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 107/241 (44%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+ P+ T+ + GF G + F+ +++ GF V+Y I+G CK G A+
Sbjct: 259 YEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAAL 318
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L + P + T+I G ++++ A L+ E + + PD+ YNA+IS
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
L A++L ++M K I D T+ + G K ++ + M++ P
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T LM +C+ V+ +++ + RG + + ++++ G C +EA + K+
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498
Query: 448 M 448
M
Sbjct: 499 M 499
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P T+TT I G L IHQA D++ D +Y +I+ L + + AA+EL
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ + K + D V Y+T+ G+ K + LY + + P T L+ FC+
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
++ ++L+ + + P + +LV G C G +EA M+ + + +
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440
Query: 460 YRMLQRYLVQANANEKLEDL 479
Y L N K E +
Sbjct: 441 YSSLMDGYCLVNEVNKAESI 460
>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
Length = 552
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 11/346 (3%)
Query: 100 TPTPDAFEKTLHILARMRYFDQA---WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
P + + R D A LM P+L+T SM ++ + K E
Sbjct: 42 APNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSM---VNGLCKAGRME 98
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ FD M RE +N LL +C + E+ +VF ++ R P+ T
Sbjct: 99 GARKVFDEMVREGLAP----DVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTF 154
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ ++G++ +M RG R + VT+ IDG+CKKG DA+ EEM +
Sbjct: 155 TSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRK 214
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
PS+ LI+G + + AR+L EM + +KPD+ Y+ +IS + +L++
Sbjct: 215 CGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDS 274
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L +M +K + D +TY ++ GL + L C+L++ M++ P T L+
Sbjct: 275 AFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLID 334
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C V+ L+L +I +G P +L+ GL R +EA
Sbjct: 335 GHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEA 380
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 135/307 (43%), Gaps = 39/307 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL---SRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N L+ AFC E+ A V V L+ PN T N ++ G ++G + + E
Sbjct: 48 YNTLVAAFCRAGELDGAERV-VSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 106
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G P VV+YN + GYCK GC +++ +F EM + +P + T T+LIH N
Sbjct: 107 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 166
Query: 298 IHQARQLFDEMPKRNLK-----------------------------------PDIGAYNA 322
+ QA L +M +R L+ P + YNA
Sbjct: 167 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 226
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + ++ A EL+ EME KR+ D VTY T+ G K L+ +L +M++
Sbjct: 227 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 286
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T L++ C R++ L+ ++ G P L+ G C G E+A
Sbjct: 287 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 346
Query: 443 ECSKQML 449
+M+
Sbjct: 347 SLHDEMI 353
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 16/285 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC + + +A ++ P+ N L+ G+ + G + EM
Sbjct: 189 FTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREME 248
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ +P VVTY+ I GYCK G A +L ++M + LP T ++LI G + ++
Sbjct: 249 AKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLN 308
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF+ M + ++PD Y +I + ++ A+ L DEM K + D VTY +
Sbjct: 309 DACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLI 368
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT---------------RTVVMLMKFFCVNFRVD 404
GL KS+ + +L ++ VP ++VV L+K FC+ +
Sbjct: 369 NGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMK 428
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ ++DR + G +L+ G C G +A KQML
Sbjct: 429 EADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQML 473
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 101/229 (44%), Gaps = 5/229 (2%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGL 294
MV G P+V TYNI + C +G +A+ + +M C P+ T TL+ AG
Sbjct: 1 MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + L E + N KP++ +N+M++ L + + A ++ DEM + + D V+
Sbjct: 61 LDGAERVVSLMRE--EGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVS 118
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G K L ++ M + VP T L+ C ++ + L +
Sbjct: 119 YNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMR 178
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+RG + L+ G C +G ++A ++M Q S Y L
Sbjct: 179 ERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 227
Score = 38.5 bits (88), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL+ FC + MKEA V+ +L R + + +IL+ G G+V F+ +M+ G
Sbjct: 417 LLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSG 476
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
F P+ + + G ++G +A +++ + C P
Sbjct: 477 FSPNSTSTISLVRGLFEEGMVVEADNAIQDL--LTCCP 512
>gi|148906806|gb|ABR16549.1| unknown [Picea sitchensis]
Length = 524
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/436 (23%), Positives = 197/436 (45%), Gaps = 27/436 (6%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFT---LQHPHFTPTPDAFEKTLHILARMRYFD 120
+S VE+VL + A G++A++FF+++ L H +P A+ + +L + + FD
Sbjct: 102 VSIQFVEDVLKLSYGA---GMEAMKFFRWSGLKLSRKH---SPLAWNLLVDLLGKEKLFD 155
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
W+ + ++ + ++++++MS + + E FD +E+ +G +
Sbjct: 156 AMWDCIKVMK--NQGIVSMETMSSVFGNYVQAGKVAEARMTFDVIEQ--------YGCPQ 205
Query: 181 ----FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
N L AFC K+ KEA F K+ + AP+ T +LL G + G+V+ +
Sbjct: 206 DVVALNCFLSAFCRYKQSKEALEFFDKVKEKIAPDADTYALLLEGLEIEGNVSKARTTFG 265
Query: 237 EMVLR-GFRPSVVT-YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
EM++R G+ P+ + YN + +A++ M+ CLP L +
Sbjct: 266 EMIIRHGWLPNNTSAYNAFLSTLVNGSQVEEALKFLAVMKTRKCLPDLGFFRNTLQILYQ 325
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDN 352
++ A L++ M + + D+ +YN MI + A L+DEM I D
Sbjct: 326 RKDTKNAYGLWELMKQSGILLDLPSYNTMIGVFCSANPIQVDFAYRLLDEMVFTGIFPDF 385
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY+T+F L+ + +E ++ M + F P VM +K + ++ + +W +
Sbjct: 386 KTYNTIFEALITARKVEEASSIFREMTKNDFCPLYANYVMAIKMYFEADDPEMAVMMWKH 445
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+I + P +L+ G C GR EA + S + + R Q+ + L+ QA
Sbjct: 446 MIQKAIFPKSDCAAILIDGFCDLGRASEALKYSLEAITRGVQIPVETMTKLKNASRQAGK 505
Query: 473 NEKLEDLDRMIKNLQA 488
+ L++ +K++ +
Sbjct: 506 QDAYGQLEKKMKSISS 521
>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g01110-like [Cucumis sativus]
Length = 749
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 178/423 (42%), Gaps = 54/423 (12%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+ ++ R ++A++L++ P LLT ++ L +I K+
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY---------- 343
Query: 163 DRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVF----------------- 201
DR +++ + + + G + +N LL C + + EA+ +F
Sbjct: 344 DR-AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 202 -VKLLSR------------------FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
+ +L+R P+N IL+ GF +G ++ EM+ RG
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
VVTYN ++G CKK F DA LF EM +P T TTLI G N+ +A
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LF+ M + NLKPD YN +I + ++ A EL D+M K I D+++Y T+ G
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
S L L D+M+E P T L+K +C + + +I G P
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLEDLDR 481
+ + L+ G E+AF +M R Q + +Y + L + + E + L +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 482 MIK 484
MI+
Sbjct: 703 MIE 705
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 13/389 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S L+ ++L R + + E F+ L+ + + +A K L L R + D AWE
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAFQI-LRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNV 183
+ V R L + +++IM++ + K + +E + ME + +F I + N
Sbjct: 244 IYGEVVRGGIEL-NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY-----NT 297
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ A+C + ++EA + SR P T N +L G + G + EM+ G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH--Q 300
P+ TYN + C++ +A +F+EM R LP L + ++LI L RN H Q
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI--GVLARNGHLYQ 415
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A F EM + + PD Y +I R L+ A+++ DEM + D VTY+T
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K L++ M+E VP T L++ +C + +D LNL+ ++ P
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L+ G C G A E M+
Sbjct: 536 DKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 174/397 (43%), Gaps = 19/397 (4%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P ++ LVE N L+A E F + P +F + +LAR +
Sbjct: 360 PNAATYNTLLVE------ICRRDNILEAQEIFD-EMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 119 FDQAWELMSHVQRTHPSLLTLKSM--SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
QA + H + S + ++ +I++ + + + L+ D M R F+ +
Sbjct: 413 LYQA---LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+ N L C +K +A +F +++ R P+ T L+ G+ + G++
Sbjct: 470 Y-----NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ MV +P VTYN IDG+CK G G A L+++M R +P + T+++G
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A L D+M ++ ++P++ N +I R D+ A E + +M I D+ +
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G +K + LE L + M + T +++ FC ++ + +I
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ G P G L+ G S+ +EAF +ML R
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC EM A+ ++ ++ + P++ + +L GF SG + +M+
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G RP++VT N I GYC+ G A +M +P + TLI G N+
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +EM KR L+ +I YN +++ + A +++ +M E I D TY ++
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
G + ++ + +D M++ VP R
Sbjct: 720 NGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 675
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L +FC Q +++EA + +++ PN+ T N+L+ G SG++ + EM+
Sbjct: 193 YNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEML 252
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G S TY+ I GYC+KG +A RL EEM +P+L T T+++G +
Sbjct: 253 RLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVS 312
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+L D M +NL PD+ +YN +I R ++ A L E+ + + VTY+T+
Sbjct: 313 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLI 372
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + L+ +L D MI+ P T +L++ FC + + L+ +++RG
Sbjct: 373 DGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQ 432
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P A + G G +AF ++ML R
Sbjct: 433 PDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 464
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/319 (25%), Positives = 145/319 (45%), Gaps = 36/319 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C + +AR + ++++ P+ + N L+ G+ G++ + + E+
Sbjct: 298 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG PSVVTYN IDG C+ G AMRL +EM + P + T T L+ G + N+
Sbjct: 358 FRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLP 417
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LFDEM R L+PD AY I ++ D + A + +EM + D +TY+
Sbjct: 418 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 477
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVP-------------------KTRTV---------- 390
GL K L+ +L +M+ VP K R V
Sbjct: 478 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIF 537
Query: 391 ------VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
+L+ + V R+ L + + + ++G P+ + L+ GLC + ++A++
Sbjct: 538 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKF 597
Query: 445 SKQMLVRRRQVSEASYRML 463
+M + ++ +Y +L
Sbjct: 598 FTEMQAKGISPNKYTYTIL 616
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 123/253 (48%), Gaps = 4/253 (1%)
Query: 200 VFVKLLSR-FAPNNKTMN--ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF K++S+ P+ K N + LL ++S A E+ Y+ MV G RP+VVTYN +D
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREV-YNVMVECGIRPTVVTYNTMLDS 199
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+CK+G +A++L +M+++ CLP+ T L++G + QA++L EM + L+
Sbjct: 200 FCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVS 259
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y+ +I L+ A L +EM + VTY+T+ +GL K + KL D
Sbjct: 260 AYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLD 319
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M+ +P + L+ + + L+ L RG P + L+ GLC G
Sbjct: 320 VMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMG 379
Query: 437 RWEEAFECSKQML 449
+ A +M+
Sbjct: 380 DLDVAMRLKDEMI 392
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 95/211 (45%), Gaps = 7/211 (3%)
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN----IHQARQLFDEMPKRN 312
Y KK + +F +M LP L+ ++ L+R+ I AR++++ M +
Sbjct: 129 YAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLR---LLRDRDSSIDVAREVYNVMVECG 185
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++P + YN M+ S + + A++L+ +M++ ++VTY+ + GL S LE
Sbjct: 186 IRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAK 245
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+L M+ T L++ +C ++D L ++ RG P + ++ GL
Sbjct: 246 ELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGL 305
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C GR +A + M+ + SY L
Sbjct: 306 CKWGRVSDARKLLDVMVNKNLMPDLVSYNTL 336
Score = 39.3 bits (90), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 47/102 (46%)
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ S ++ ++Y+ M+E P T ++ FC +V L L + G P+
Sbjct: 167 RDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDV 226
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
++LV GL G E+A E ++ML +VS +Y L R
Sbjct: 227 TYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIR 268
>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 168/415 (40%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL+ + + H P + + L + A L + +Q P L T S
Sbjct: 236 VSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M + ++ E+ L+ + +ER+I + + N L+ AF + + EA ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAEELY 348
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T + ++ GF + + A E ++ M +G P+++T+N IDGYC
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D M L EM + T TLIHG LV +++ A L EM
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL +EM + I D +TY +M GL K S L+ +++D M F P T L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG + L+ G G A + ++M+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 48/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ +A + ++L R +P+ T N L+ F + G E Y EM+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TY+ IDG+CK+ A +F M C P+L T TLI G + I
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L+ EM + D VT T+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ L+ G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M R + +Y ++ + N N L+ MI +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A EM+
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT + +DG C G DA+ +F+ M++ P +QT L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI L + L+ A ++ D M K
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT+ T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++TGL S+ + A
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 153/362 (42%), Gaps = 11/362 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P F LH L +A L + T P+++T ++ L R + E
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV---EA 203
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+ DRM + G++ + ++ C + A + K+ +S PN +
Sbjct: 204 VALLDRMMED---GLQP-TQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYS 259
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ + G + + + EM +G P + TYN I G+C G + DA +L +EM
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T LI+ +A +L+DEM R + P+ Y++MI + L+AA
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ M K + +T++T+ G + ++ +L M E V T T L+
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F + ++ L+L +I G CP D L+ GLC G+ ++A E K M ++ +
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 457 EA 458
+
Sbjct: 500 AS 501
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 29/367 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++ I I +C A+ F ++ ++ P + T TL+HG + + +A LF
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+ ++ G CS GRW +A + ++ML R+ +Y L V+ + E+L D M+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 485 NLQAVLP 491
+ ++P
Sbjct: 354 --RGIIP 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-----FVGIRKFGSEEFNVLLQAF 188
P ++T ++ L K + E + + ++++ F G+ + +N+L+
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP-DVQTYNILISGL 521
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R P+ T + ++ G + + + M + F P+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+ I+GYCK G D + LF EM R + + T TLI G V NI+ A +F E
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD M++ L +L A+ ++++++
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
Length = 667
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 106/382 (27%), Positives = 166/382 (43%), Gaps = 26/382 (6%)
Query: 121 QAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
A L S +Q P+L T M I+ F S EA R+ RE+F RK
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCM------INGFCSSGRWSEA-QRLLREMFE--RKMSP 316
Query: 179 E--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ F+VL+ A + + EA ++ ++L R PN T N ++ GF + + A E +
Sbjct: 317 DVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMF 376
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+ M +G P V+T++I IDGYC D M+L EM R + + T TTLIHG +
Sbjct: 377 YLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQL 436
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-- 353
N++ A L EM + P++ N ++ L L A+E+ M++ ++ D
Sbjct: 437 GNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496
Query: 354 ---------TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
TY+ + GL+ +LY+ M VP T T ++ C R+D
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLD 556
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
++ + +GF P L+ G C GR + E +M R + +YR L
Sbjct: 557 EATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616
Query: 465 RYLVQ-ANANEKLEDLDRMIKN 485
Q N N L+ MI +
Sbjct: 617 HGFCQVGNINGALDIFQEMISS 638
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 161/366 (43%), Gaps = 35/366 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+P F ++ L + F +A EL + + + P+ +T SM S+ ++
Sbjct: 315 SPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRL----- 369
Query: 158 TLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
D ER ++ K S + F++L+ +C K + + + ++ R N
Sbjct: 370 -----DAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTI 424
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ GF + G++ A EM+ G P+VVT N +DG C G DA+ +F+ M
Sbjct: 425 TYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Query: 274 ERVA-----------CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
++ P +QT LI G +A +L++EMP R L PD YN+
Sbjct: 485 QKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNS 544
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK----SSGLEGVCKLYDRM 378
+I L + L+ A ++ D M K D VT+ T+ G K GLE C++ R
Sbjct: 545 VIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRG 604
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
I V T L+ FC ++ L+++ +I G P + ++TGL S+
Sbjct: 605 I----VANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEEL 660
Query: 439 EEAFEC 444
+ A +C
Sbjct: 661 KRAVQC 666
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 154/352 (43%), Gaps = 11/352 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P+ F LH L +A + + P+++ ++ L R +
Sbjct: 142 FHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK--PNVIAFTTLMNGLCREGR------V 193
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+EA ++R + G++ + ++ C + A ++ K+ +SR PN +
Sbjct: 194 VEAVALLDRMVEDGLQP-NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYS 252
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G + G T + + EM +G P++ TYN I+G+C G + +A RL EM
Sbjct: 253 AIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFER 312
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T + LI+ +A +L++EM R + P+ YN+MI + L+AA
Sbjct: 313 KMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAA 372
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ M K D +T+ + G + ++ KL M V T T L+
Sbjct: 373 ERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHG 432
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
FC ++ L+L +I G CP+ + L+ GLC+ G+ ++A E K M
Sbjct: 433 FCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVM 484
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 132/307 (42%), Gaps = 5/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
F+ LL C + + EA F ++ PN L+ G G V MV
Sbjct: 149 FSTLLHGLCVEDRVSEALHFFHQICK---PNVIAFTTLMNGLCREGRVVEAVALLDRMVE 205
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL-PSLQTITTLIHGAGLVRNIH 299
G +P+ +TY +DG CK G A+ L +ME V+ + P++ + +I G
Sbjct: 206 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQT 265
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ LF EM ++ + P++ YN MI+ + A L+ EM E+++ D VT+ +
Sbjct: 266 DAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLI 325
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L+K +LY+ M+ +P T T ++ F R+D ++ + +G
Sbjct: 326 NALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCS 385
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLED 478
P +L+ G C R ++ + +M R + +Y L Q N N L+
Sbjct: 386 PDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDL 445
Query: 479 LDRMIKN 485
L MI +
Sbjct: 446 LQEMISS 452
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 1/163 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +N+L+ + + EA ++ ++ R P+ T N ++ G + + +
Sbjct: 505 QTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDS 564
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M +GF P VVT+ I+GYCK G GD + +F EM R + + T TLIHG V N
Sbjct: 565 MGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGN 624
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
I+ A +F EM + PD M++ L +L A++ +
Sbjct: 625 INGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 112/247 (45%), Gaps = 5/247 (2%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ +M +R ++ ++ I I +C A+ F ++ ++ PSL T +TL+HG
Sbjct: 98 LHRKMEMRRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLC 157
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + +A F ++ KP++ A+ +++ L R + A+ L+D M E + + +
Sbjct: 158 VEDRVSEALHFFHQI----CKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQI 213
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY T+ G+ K L +M E + P ++ + R NL+
Sbjct: 214 TYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSE 273
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ ++G P+ + ++ G CS GRW EA ++M R+ ++ +L LV+
Sbjct: 274 MQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGK 333
Query: 473 NEKLEDL 479
+ E+L
Sbjct: 334 FFEAEEL 340
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 40/199 (20%), Positives = 81/199 (40%), Gaps = 11/199 (5%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
++ + A LF M + P + + ++ ++R + + L +ME +RI + +
Sbjct: 54 IKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMRRIPCNIYS 113
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ + S L + ++ + F P T L+ CV RV L+ + +
Sbjct: 114 FTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQIC 173
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA---- 470
P+ A L+ GLC GR EA +M+ Q ++ +Y + + +
Sbjct: 174 K----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 229
Query: 471 ---NANEKLEDLDRMIKNL 486
N K+E++ R+ N+
Sbjct: 230 SALNLLRKMEEVSRIKPNV 248
>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63130, mitochondrial; Flags: Precursor
gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 630
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/375 (25%), Positives = 168/375 (44%), Gaps = 14/375 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M FD L +Q S L + SI+++ + L
Sbjct: 79 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSILINCFCRRSQLSLALA 137
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+M K G E N LL FC + +A S+ +++ + P++ T
Sbjct: 138 VLAKM--------MKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTF 189
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + MV++G +P +VTY I ++G CK+G A+ L ++ME+
Sbjct: 190 NTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQ 249
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T+I +N++ A LF EM + ++P++ YN++I L +
Sbjct: 250 GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 309
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ +M E++I + VT+ + +K L KLYD MI+ P T L+
Sbjct: 310 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 369
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D +++ +I + P+ + L+ G C R +E E ++M R
Sbjct: 370 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVG 429
Query: 456 SEASYRMLQRYLVQA 470
+ +Y L QA
Sbjct: 430 NTVTYTTLIHGFFQA 444
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 86/389 (22%), Positives = 185/389 (47%), Gaps = 10/389 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+ P F +H L R +A L+ V+ P L+T I+++ + K +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTY---GIVVNGLCKRGDID 238
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L +ME+ G + G +N ++ A C K + +A ++F ++ ++ PN T
Sbjct: 239 LALSLLKKMEQ----GKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTY 294
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + +M+ R P+VVT++ ID + K+G +A +L++EM +
Sbjct: 295 NSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 354
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ P + T ++LI+G + + +A+ +F+ M ++ P++ YN +I + + ++
Sbjct: 355 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDE 414
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
MEL EM ++ + + VTY T+ G ++ + ++ +M+ +P T +L+
Sbjct: 415 GMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLD 474
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C N +V+ L ++ YL P + ++++ G+C G+ E+ ++ + ++ +
Sbjct: 475 GLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 456 SEASYRMLQRYLVQANANEKLEDLDRMIK 484
+ +Y + + E+ + L R +K
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMK 563
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 129/297 (43%), Gaps = 21/297 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F+ DAF K ++ + +D+ + + P + T S+ I+ F ++
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEMIK-----RSIDPDIFTYSSL------INGFCMHDRL 377
Query: 159 LEA---FDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
EA F+ M ++ F + +N L++ FC K + E +F ++ R N
Sbjct: 378 DEAKHMFELMISKDCFPNV-----VTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTV 432
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ GF ++ + ++ + +MV G P ++TY+I +DG C G A+ +FE +
Sbjct: 433 TYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYL 492
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+R P + T +I G + LF + + +KP++ Y M+S R
Sbjct: 493 QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLK 552
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A L EM+E+ D+ TY+T+ ++ +L M +FV T+
Sbjct: 553 EEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 609
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 78/172 (45%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF +M K P I ++ ++S++ + + + L ++M+ I H+ TY
Sbjct: 62 LDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 121
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S L + +M++ + P T+ L+ FC R+ ++L G +++ G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ P + L+ GL R EA +M+V+ Q +Y ++ L +
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCK 233
>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 935
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +M+EA + +++ R P+ T +LG+ ++G +T ++ EM+
Sbjct: 422 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
G P+ Y + I+G+ K G +A+ +F + + LP +QT + IHG L++N
Sbjct: 482 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG--LLKNGR 539
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++F E+ ++ L PD+ Y+++IS + ++ A EL DEM K I + Y+
Sbjct: 540 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 599
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL KS ++ KL+D M E P + T ++ +C + V +L+ + +G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
PH + LV G C G E+A ++ML + + + ++ Y E +
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 719
Query: 478 DLDRMI 483
MI
Sbjct: 720 LFQEMI 725
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 202/478 (42%), Gaps = 36/478 (7%)
Query: 22 LLFSTTTQSSEIERITRIINDHPF-PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAH 80
L +S T + +E + + DH P+ PL+ L+ G A
Sbjct: 462 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN-----------------GHFKAG- 503
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLT 138
N ++AL F+ L P +H L + +A ++ S ++ P + T
Sbjct: 504 -NLMEALSIFRH-LHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 561
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
S+ IS F E +AF+ + GI +N L+ C +++ AR
Sbjct: 562 YSSL------ISGFCKQGEVEKAFELHDEMCLKGIAP-NIFIYNALVDGLCKSGDIQRAR 614
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+F + + P++ T + ++ G+ +S +V +HEM +G +P YN + G
Sbjct: 615 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 674
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK+G AM LF EM + +L + TLI G I +A QLF EM + + PD
Sbjct: 675 CKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 733
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y +I + + A L EM+E+ + D VTY ++ +G K V L+++
Sbjct: 734 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 793
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M+ P T +++ C + L ++ +G G DLL+T LC R
Sbjct: 794 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 853
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
EA + +M + S A+ L R +A K+++ R+ + ++++ L P T
Sbjct: 854 LTEASKLLDEMGELGLKPSLAACSTLVRSFHEAG---KMDEATRVFEGVKSLGLVPDT 908
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 119/478 (24%), Positives = 197/478 (41%), Gaps = 77/478 (16%)
Query: 24 FSTTTQSSEIERITRIINDHPFPDQPLHPTLL--QHLPQTTPLSSTLVENVLGRLFAAHS 81
FST+T +SE ++ I+D F Q T++ H+P + L+ ++ VL H
Sbjct: 29 FSTSTPTSETLNFSQQISD--FLKQNNWKTIMVSSHIP--SKLNPDVIRAVL------HQ 78
Query: 82 NGL----KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLL 137
N + + L+FF ++ D+F L F A +++ + RT S
Sbjct: 79 NQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYS-- 136
Query: 138 TLKSMSIMLSRISKFQSYEET--------LEAFDRM------EREIFVG----------- 172
S SI+ S + F++Y + ++++ RM FV
Sbjct: 137 ---SSSILDSVLFWFRNYGGSSPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIR 193
Query: 173 ---IRKFGSE-------EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLG 221
+R G + + ++ C K M EA+ F ++ + P+ + L+ G
Sbjct: 194 CNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDG 253
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F GD+ + MV G +++TYN+ I G CK G A + + M + C P+
Sbjct: 254 FMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPN 313
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+T LI G N+ +A +L DEM KRNL P +Y AMI+ L C+DL+ A +L++
Sbjct: 314 SRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLE 373
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M + + V Y T+ G +E +L D M P FC N
Sbjct: 374 KMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAP---------DIFCYNA 424
Query: 402 RVDLGLNLWG-------YLID---RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L+ G YL++ RG P + G G+ EA + +ML
Sbjct: 425 IISC-LSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 481
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 38/308 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+NVL+ C +M++A + +++ PN++T +L+ G+ +E A+E+ EM
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL-DEM 340
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
R PS V+Y I+G C A +L E+M P++ +TLI G I
Sbjct: 341 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 400
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+AR+L D M + PDI YNA+IS L + + A + E++ + + D VT+
Sbjct: 401 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 460
Query: 359 FFGLMKSSGLEGVCKLYDRM---------------IEGKF-------------------- 383
G K+ + K +D M I G F
Sbjct: 461 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 520
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P +T + N RV L ++ L ++G P L++G C +G E+AFE
Sbjct: 521 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 580
Query: 444 CSKQMLVR 451
+M ++
Sbjct: 581 LHDEMCLK 588
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 4/309 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S M+ K ++ E F M + G++ S +N L+ C + +M++A ++
Sbjct: 631 TYSTMIDGYCKSENVAEAFSLFHEMPSK---GVQPH-SFVYNALVHGCCKEGDMEKAMNL 686
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F ++L + + N L+ G+ +S + + EM+ + P VTY ID +CK
Sbjct: 687 FREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 746
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A LF+EM+ + T T+L++G + + LF++M + +KPD Y
Sbjct: 747 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 806
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+I + + +L A +L DE+ K + + + L K L KL D M E
Sbjct: 807 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 866
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P L++ F ++D ++ + G P L LV G + E+
Sbjct: 867 LGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 926
Query: 441 AFECSKQML 449
A KQ++
Sbjct: 927 ARNLIKQLV 935
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 90/429 (20%), Positives = 160/429 (37%), Gaps = 88/429 (20%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM---SHVQRT 132
L NG +FFK +++ TPT + + I ++ W+ + SH+
Sbjct: 10 LLLTDQNGFTNTKFFK-SIEFSTSTPTSETLNFSQQISDFLK--QNNWKTIMVSSHI--- 63
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
PS L + +L + ++ + L+ F + ++ G+ +F + F++L C +
Sbjct: 64 -PSKLNPDVIRAVLHQ-NQVGDPKRLLDFFYWSQSQM--GVPQF-LDSFSILAVQLCNSE 118
Query: 193 EMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
A V +++ ++ ++ +L F+ G G P V ++I
Sbjct: 119 LFGLANGVLTQMIRTPYSSSSILDSVLFWFRNYG---------------GSSP--VVFDI 161
Query: 253 RIDGYCKKGCFGDAMRLF------------------EEMERVACLPSLQTITTLIHGAGL 294
ID Y + G +A +F M +P+ T T + G
Sbjct: 162 LIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCR 221
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +++A+ F+EM K LKPD A +A+I +R D++ + + D M I + +T
Sbjct: 222 AKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 281
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + GL K +E ++ MI P +RT
Sbjct: 282 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT------------------------- 316
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--- 471
FC LL+ G C A E +M R S SY + L
Sbjct: 317 ---FC-------LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLS 366
Query: 472 -ANEKLEDL 479
AN+ LE +
Sbjct: 367 LANKLLEKM 375
>gi|224081016|ref|XP_002306265.1| predicted protein [Populus trichocarpa]
gi|222855714|gb|EEE93261.1| predicted protein [Populus trichocarpa]
Length = 548
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 208/490 (42%), Gaps = 46/490 (9%)
Query: 15 GISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLG 74
S R L T S++ + +++I+ H P + +L LP + L+ +L+ L
Sbjct: 39 AFSPRNDTLLPTLQPSNDADLLSQILLHHHNPFHAMESSL--QLPGIS-LTPSLLHQTLL 95
Query: 75 RLFAAHSNGLKALEFFKFTLQ-HPHFTPTPD------------------AFEKTLHILAR 115
RL N AL F +L P T P + + ILA+
Sbjct: 96 RL---RHNSKIALSLFHHSLSLPPTSTDNPPTSTGTSTTSADSSTATTVTYNLMIDILAK 152
Query: 116 MRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
+R FD W+L+ + + + T ++ +++ R+ + + AFD ME FV
Sbjct: 153 VRQFDVCWQLIVEMDQRNVKP-TSETFFVLIRRLVAAGLTRQAIRAFDDMES--FVS-EP 208
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
F LL C +K +F K RF+PN K +L+ G+ + G + E F
Sbjct: 209 VNETHFCFLLDTLCKYGYVKVGVEIFNKRKHRFSPNVKMYTVLIYGWCKIGRIDMAERFL 268
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR----------LFEEMERVACLPSLQTI 285
E RG +VVTYN+ ++G C++ R LF+EM P + +
Sbjct: 269 KETGERGIEATVVTYNVLLNGICRRASLHPESRFERTITLAENLFDEMRERGIEPDVTSF 328
Query: 286 TTLIHGAGLVRNIHQARQLFDE---MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ ++H + H+ D+ M ++ + P + Y +++ L C + A EL+ E
Sbjct: 329 SIVLH---VYSRAHKPELTLDKLKLMKEKGICPSVVTYTSVVKCLCSCGRIEDAEELLGE 385
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNF 401
M + VTY+ F M E KLY +M E G + +L++ F +
Sbjct: 386 MVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKMREDGLGSLGLHSYNILLRMFMMLN 445
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
R+D+ +W L G P + +L+ GLC + +W EA + +M+ + + ++
Sbjct: 446 RLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEMIEKGLLPQKVTFE 505
Query: 462 MLQRYLVQAN 471
L + L+Q++
Sbjct: 506 TLYKGLIQSD 515
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 71/157 (45%), Gaps = 3/157 (1%)
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL--Q 283
G + E EMV G + VTYN Y + A++L+++M R L SL
Sbjct: 374 GRIEDAEELLGEMVRNGVSRTAVTYNCFFKEYMGRKDAESALKLYKKM-REDGLGSLGLH 432
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+ L+ ++ + ++++++ L PD+ +Y +I L A + EM
Sbjct: 433 SYNILLRMFMMLNRLDIVNEIWEDLKSSGLGPDLDSYTMLIHGLCEKEKWREACKFFVEM 492
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
EK + VT+ T++ GL++S L +L ++ E
Sbjct: 493 IEKGLLPQKVTFETLYKGLIQSDMLRTWRRLKKKLDE 529
>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Cucumis sativus]
Length = 749
Score = 130 bits (328), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 178/423 (42%), Gaps = 54/423 (12%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+ ++ R ++A++L++ P LLT ++ L +I K+
Sbjct: 294 TYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKY---------- 343
Query: 163 DRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVF----------------- 201
DR +++ + + + G + +N LL C + + EA+ +F
Sbjct: 344 DR-AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSS 402
Query: 202 -VKLLSR------------------FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
+ +L+R P+N IL+ GF +G ++ EM+ RG
Sbjct: 403 LIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARG 462
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
VVTYN ++G CKK F DA LF EM +P T TTLI G N+ +A
Sbjct: 463 CFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKAL 522
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LF+ M + NLKPD YN +I + ++ A EL D+M K I D+++Y T+ G
Sbjct: 523 NLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGF 582
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
S L L D+M+E P T L+K +C + + +I G P
Sbjct: 583 CSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDS 642
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLEDLDR 481
+ + L+ G E+AF +M R Q + +Y + L + + E + L +
Sbjct: 643 FSYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRK 702
Query: 482 MIK 484
MI+
Sbjct: 703 MIE 705
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 106/389 (27%), Positives = 174/389 (44%), Gaps = 13/389 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S L+ ++L R + + E F+ L+ + + +A K L L R + D AWE
Sbjct: 185 SVGLIYDLLVRTYVQAKKLREGSEAFQI-LRRKGVSVSINACNKLLGGLVRTGWVDLAWE 243
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNV 183
+ V R L + +++IM++ + K + +E + ME + +F I + N
Sbjct: 244 IYGEVVRGGIEL-NVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTY-----NT 297
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ A+C + ++EA + SR P T N +L G + G + EM+ G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH--Q 300
P+ TYN + C++ +A +F+EM R LP L + ++LI L RN H Q
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI--GVLARNGHLYQ 415
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A F EM + + PD Y +I R L+ A+++ DEM + D VTY+T
Sbjct: 416 ALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLN 475
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K L++ M+E VP T L++ +C + +D LNL+ ++ P
Sbjct: 476 GLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKP 535
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L+ G C G A E M+
Sbjct: 536 DKVTYNTLIDGFCKAGEMGRAKELWDDMI 564
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 174/397 (43%), Gaps = 19/397 (4%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P ++ LVE N L+A E F + P +F + +LAR +
Sbjct: 360 PNAATYNTLLVE------ICRRDNILEAQEIFD-EMSRRGVLPDLVSFSSLIGVLARNGH 412
Query: 119 FDQAWELMSHVQRTHPSLLTLKSM--SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
QA + H + S + ++ +I++ + + + L+ D M R F+ +
Sbjct: 413 LYQA---LMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVT 469
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+ N L C +K +A +F +++ R P+ T L+ G+ + G++
Sbjct: 470 Y-----NTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNL 524
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ MV +P VTYN IDG+CK G G A L+++M R +P + T+++G
Sbjct: 525 FEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCS 584
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A L D+M ++ ++P++ N +I R D+ A E + +M I D+ +
Sbjct: 585 SGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFS 644
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G +K + LE L + M + T +++ FC ++ + +I
Sbjct: 645 YNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMI 704
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ G P G L+ G S+ +EAF +ML R
Sbjct: 705 EIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQR 741
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 100/209 (47%), Gaps = 1/209 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC EM A+ ++ ++ + P++ + +L GF SG + +M+
Sbjct: 540 YNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQML 599
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G RP++VT N I GYC+ G A +M +P + TLI G N+
Sbjct: 600 EKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLE 659
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +EM KR L+ +I YN +++ + A +++ +M E I D TY ++
Sbjct: 660 KAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLI 719
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
G + ++ + +D M++ VP R
Sbjct: 720 NGHVSQDNMKEAFRFHDEMLQRGLVPDDR 748
>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 612
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 81/323 (25%), Positives = 157/323 (48%), Gaps = 2/323 (0%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
EAFD + GI ++ L+ FC ++ +A +F K++S P+ T +IL
Sbjct: 214 EAFDLYSEMVSKGISP-DVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSIL 272
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF + G V + M+ +G +P VVTY +DGYC A +F M +
Sbjct: 273 VDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGV 332
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
++Q+ +I+G ++ + +A LF EM +N+ PD+ YN++I L + ++ A++
Sbjct: 333 TANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALK 392
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L+DEM ++ + HD +TY+++ L K+ ++ L +M + P T +L+ C
Sbjct: 393 LVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLC 452
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
R+ N++ L+ +G+ + +++ G C +++A +M +
Sbjct: 453 KGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAK 512
Query: 459 SYRMLQRYLVQANANEKLEDLDR 481
+Y ++ L + + N+ E L R
Sbjct: 513 TYEIIILSLFEKDENDMAEKLLR 535
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 167/355 (47%), Gaps = 12/355 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + +++ ++A++L S + + P ++T S ++S +
Sbjct: 194 PNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT---YSALISGFCILGKLNDA 250
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ F++M EI + F++L+ FC + +KEA++V ++ + P+ T
Sbjct: 251 IGLFNKMISEEINPDVY-----TFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYC 305
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G+ V + ++ M G +V +YNI I+G+CK +AM LF+EM
Sbjct: 306 SLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCK 365
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P + T +LI G I A +L DEM R + D YN+++ +L + ++ A
Sbjct: 366 NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKA 425
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ L+ +M+++ I D TY + GL K L+ +++ ++ + T ++++
Sbjct: 426 IALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQG 485
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
FC N D L L + D G P+ ++++ L + + A + ++M+ R
Sbjct: 486 FCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIAR 540
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 88/382 (23%), Positives = 162/382 (42%), Gaps = 11/382 (2%)
Query: 87 LEFFKFTLQHPHFTPTPD-AFEKTLHILARMRYFDQAWELMSHVQRT---HPSLLTLKSM 142
+ F F++ H F P P +L+ + D L+S R +P+ +
Sbjct: 2 IRFVPFSVSHFQF-PNPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFG 60
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I L + K Y+ + ME F GI FN+L+ F + SVF
Sbjct: 61 KI-LGSLVKINCYQTAISLHREME---FNGIAS-DLVTFNILINCFSQLGHTHFSFSVFA 115
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+L + + PN T+ L+ G G + F+ ++V GF + V Y I+G CK G
Sbjct: 116 NILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVG 175
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A++L ++ P++ T+I V+ +++A L+ EM + + PD+ Y+
Sbjct: 176 QTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYS 235
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
A+IS LN A+ L ++M + I D T+ + G K ++ + M++
Sbjct: 236 ALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQ 295
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T LM +C+ +V+ +++ + G + + ++++ G C + +EA
Sbjct: 296 GIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEA 355
Query: 442 FECSKQMLVRRRQVSEASYRML 463
K+M + +Y L
Sbjct: 356 MNLFKEMHCKNIIPDVVTYNSL 377
>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 447
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 99/383 (25%), Positives = 175/383 (45%), Gaps = 10/383 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TP F K L L +M+++ A L V+ P+L+TL + I+ F +
Sbjct: 62 TPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNIL------INCFCHLGQ 115
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+F + + + +G + + N L++ C + E+K + K++++ F N +
Sbjct: 116 MAFSFSVLGKILKLGYQP-DTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYG 174
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G + G+ + R RP VV Y+ IDG CK A F EM
Sbjct: 175 TLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNAR 234
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P++ T +TLI G L + A L +EM +N+ P++ YN +I +L + + A
Sbjct: 235 GIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEA 294
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L+ EM K D VTY+++ GL KS L+ L+ +M + P T L+
Sbjct: 295 KKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDG 354
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C R+ L+ +L+ +G C +++++GLC G +++A +M +
Sbjct: 355 LCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPN 414
Query: 457 EASYRMLQRYLVQANANEKLEDL 479
++ ++ R L + + N+K E L
Sbjct: 415 AVTFDIIIRSLFEKDENDKAEKL 437
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 48/231 (20%), Positives = 99/231 (42%), Gaps = 4/231 (1%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGY-CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
++ ++L P ++ + +I GY K + A+ L +ME P+L T+ LI+
Sbjct: 53 FNRLLLVRHTPPIIEFG-KILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFC 111
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + + ++ K +PD N ++ L ++ ++ D++ + + V
Sbjct: 112 HLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQV 171
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
+Y T+ GL K KL RMIE + P ++ C + V+ + +
Sbjct: 172 SYGTLLNGLCKIGETRCAVKLL-RMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSE 230
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ RG P+ L+ G C G+ AF +M+++ + +Y +L
Sbjct: 231 MNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNIL 281
>gi|357499981|ref|XP_003620279.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495294|gb|AES76497.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 163/346 (47%), Gaps = 22/346 (6%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
ET A D ++R + + + + +N ++ C K + +A ++ +++S+ +PN T
Sbjct: 175 ETRAALDLLQR-VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 233
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ GF G + +++++L +P T+NI +DG+CK + +F M +
Sbjct: 234 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 293
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P + T +L+ G LV+ ++ A+ +F+ M + + PDI +YN +I+ + + ++
Sbjct: 294 QGIIPDVVTYNSLMDGYCLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 353
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AM L +EM K I + VTY+++ GL KS + +L D+M + P T ++
Sbjct: 354 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 413
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL--------------------CSR 435
+VD + L D+G P + +L+ GL C +
Sbjct: 414 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKK 473
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
G ++EA +M + +Y + R L+ N N+K E L R
Sbjct: 474 GLFDEALSLLSKMKDSSCIPNAVTYEITIRSLLDNNENDKAEKLFR 519
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 137/332 (41%), Gaps = 65/332 (19%)
Query: 106 FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ ++ + + ++ + A++L S + + P+++T ++ IS F + +A D
Sbjct: 198 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL------ISGFFVVGKLKDAID 251
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ I I+ G FN+L+ FC ++MKE ++VF ++ + P+ T N L+ G+
Sbjct: 252 LFNKIILENIKPDG-YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLMDGY 310
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+V + ++ M G P + +YNI I+G+CK AM LF EM +P++
Sbjct: 311 CLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 370
Query: 283 QTITTLI-------------------HGAGLVRNI-------------HQ---ARQLFDE 307
T +LI H G+ NI HQ A L +
Sbjct: 371 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 430
Query: 308 MPKRNLKPD--------------------IGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
+ ++P + YN MI + + A+ L+ +M++
Sbjct: 431 FKDQGIQPSMYTYTILIDGLCKVEGYDITVNTYNVMIHGFCKKGLFDEALSLLSKMKDSS 490
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ VTY L+ ++ + KL+ MI
Sbjct: 491 CIPNAVTYEITIRSLLDNNENDKAEKLFREMI 522
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 96/224 (42%), Gaps = 4/224 (1%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F + DV ++ ++ + P +N + K + + L ++ME P+
Sbjct: 61 FHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKPN 120
Query: 282 LQTITTLIHG---AGLVR-NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
L LI+ GL+ IHQA D++ D +Y +I L + + AA+
Sbjct: 121 LFNCNILIYCFCQLGLIPCQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAAL 180
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+ ++ K + + V Y+T+ +G+ K + LY M+ P T L+ F
Sbjct: 181 DLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGF 240
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
V ++ ++L+ +I P G+ ++LV G C + +E
Sbjct: 241 FVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 284
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 111/253 (43%), Gaps = 7/253 (2%)
Query: 187 AFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
F + ++ +A S+F +LL + P N +L +S + +M RG +P
Sbjct: 60 TFHSNNDVDDAVSLFNRLLRQNPTPPAFEFNKILGSLVKSKHYHTVLSLSQKMEFRGIKP 119
Query: 246 SVVTYNIRIDGYCKKG---CFGDAMRLFEEMERVACLPSLQTIT--TLIHGAGLVRNIHQ 300
++ NI I +C+ G C LF + + VA L ++ TLIHG V
Sbjct: 120 NLFNCNILIYCFCQLGLIPCQIHQAFLFHD-KLVALGFHLDQVSYGTLIHGLCKVGETRA 178
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L + + ++ + YN +I + + + +N A +L EM K I + VTY +
Sbjct: 179 ALDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALIS 238
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G L+ L++++I P T +L+ FC + ++ G ++ ++ +G P
Sbjct: 239 GFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIP 298
Query: 421 HGHALDLLVTGLC 433
+ L+ G C
Sbjct: 299 DVVTYNSLMDGYC 311
>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial [Vitis vinifera]
gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
Length = 765
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 181/417 (43%), Gaps = 45/417 (10%)
Query: 110 LHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME- 166
L L R R F + L++ ++ P+++T I+++ + KF+ +E LE F++M
Sbjct: 312 LTALGRAREFKRMNTLLAEMKEMDIQPNVVTF---GILINHLCKFRRVDEALEVFEKMNG 368
Query: 167 ---------------REIFVGIRKFGSEE---------------------FNVLLQAFCT 190
+ G+ K G +E +N L+ +C
Sbjct: 369 GESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCK 428
Query: 191 QKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
++ AR +F ++ PN T+N L+ G + G + F++EM +G + + VT
Sbjct: 429 ASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVT 488
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I +C AM LF+EM C P TLI G + +A + +M
Sbjct: 489 YTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMK 548
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ PDI ++N +I+ R L+ A E++ EME I D VTY+T+ K+
Sbjct: 549 EAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFS 608
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL-DLL 428
+L +M++ VP T L+ +C+N +D + ++ + P + ++L
Sbjct: 609 TAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNIL 668
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
+ LC + + + A M V+ + + ++ + + L + N ++ E +DRM +
Sbjct: 669 INSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 149/331 (45%), Gaps = 49/331 (14%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
D + K I A FDQ + P+++TL ++ + + K +E F+
Sbjct: 424 DGYCKASMIEAARELFDQM-----NKDGVPPNVVTLNTL---VDGMCKHGRINGAVEFFN 475
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
M+ + G + + L++AFC +++A +F ++L + +P+ L+ G
Sbjct: 476 EMQGKGLKG----NAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGL 531
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK---------------------- 260
++G + +M GF P +V++N+ I+G+C+K
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591
Query: 261 -------------GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
G F A RL ++M + +P++ T LIH L N+ +A ++F +
Sbjct: 592 VTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRD 651
Query: 308 MPKRN-LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
M + + P+ YN +I+SL R ++ A+ LMD+M+ K + + T++ MF GL + +
Sbjct: 652 MSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKN 711
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L +L DRM E P T+ +L ++
Sbjct: 712 WLSKAFELMDRMTEHACNPDYITMEILTEWL 742
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 86/215 (40%), Gaps = 13/215 (6%)
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSL 136
+ + L F ++ F+P +F ++ R D+A+E++ ++ P
Sbjct: 532 SQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDG 591
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMK 195
+T ++ +S SK + +M +E V + +G+ L+ A+C +
Sbjct: 592 VTYNTL---ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGA-----LIHAYCLNGNLD 643
Query: 196 EARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
EA +F + S+ PN NIL+ V +M ++G +P+ T+N
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
G +K A L + M AC P T+ L
Sbjct: 704 FKGLQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738
>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 925
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 108/407 (26%), Positives = 182/407 (44%), Gaps = 21/407 (5%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
+AL+F +H PT F + L M + AW++ +++ P++ T S+
Sbjct: 316 EALDFISEMTRH-GVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSL 374
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I R+S+ + F RM R+ V + +N L+ E+ A VF
Sbjct: 375 -ISGQRVSRM-----AIGLFHRMSRDGVVP----NTVTYNALMNVLMENMEIDSALIVF- 423
Query: 203 KLLSRFA--PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGF-RPSVVTYNIRIDGYC 258
++ + PN + N L+ G+ GD AM M + +L+G P++VTYNI I GYC
Sbjct: 424 NMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTN--MLKGRPTPTLVTYNIIIKGYC 481
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
G A+R+ E M+ C P + T LI G + + A +F+EM R L P+
Sbjct: 482 DSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEV 541
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y A+IS + L+ A +++ M+ + TY+ + GL K + G +L M
Sbjct: 542 TYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 601
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+E K P T ++ C N + L L ++ ++ G P+ H L+ L GR
Sbjct: 602 LEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRV 661
Query: 439 EEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
EEA E ++ + E +Y +M++ ++ + + L MI
Sbjct: 662 EEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMIN 708
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 118/277 (42%), Gaps = 4/277 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN N ++ + G+V E +++ G +P TY I GYC+ A +
Sbjct: 226 PNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEI 285
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F M+ C P+ T +TLI+G +++A EM + + P + + A I +L
Sbjct: 286 FNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCD 345
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ A ++ +M++K + TY ++ G S G L+ RM VP T T
Sbjct: 346 MGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIG---LFHRMSRDGVVPNTVT 402
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
LM N +D L ++ + G P+ + + L+ G C+ G E+A ML
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462
Query: 450 VRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
R + +Y +++ Y + + + L+ M N
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKAN 499
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 101/217 (46%), Gaps = 16/217 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC +M+ A +F +++ R PN T L+ G+ + + M
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G RP+V TYN+ I G K+ F A L + M P + T +T+I+G I
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM- 358
A ++F++M K P++ Y+++I +L + + A E+ E++++ + D VTY M
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687
Query: 359 --------------FFGLMKSSGLEGVCKLYDRMIEG 381
F G M ++G + + YD +I+G
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 82/384 (21%), Positives = 148/384 (38%), Gaps = 67/384 (17%)
Query: 154 SYEETLEAFDRMER-EIFVGI------RKFGSEE--FNVLLQAFCTQKEMKEARSVFVKL 204
SY E + F ++ + E+ G+ R E + L+ +C +++ A + ++
Sbjct: 507 SYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERM 566
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
S PN +T N+L+ G + + + E M+ P VVTY+ I+G C G
Sbjct: 567 KRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAI 626
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+ +F +M + CLP+L T ++LI G + +A ++F E+ K+ L PD Y M
Sbjct: 627 PLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKM 686
Query: 324 ISSLIRCRDLNAAME-----------------------LMDEM----------------- 343
I + ++ A + L +EM
Sbjct: 687 IEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTF 746
Query: 344 EEKRIGHDNVT-----------------YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+++ I D ++ Y + L +S LY M+ P
Sbjct: 747 DDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPN 806
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T + +VDL ++++ ++ D+ H L+ LC R +EA +
Sbjct: 807 QDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFE 866
Query: 447 QMLVRRRQVSEASYRMLQRYLVQA 470
+ML R E + +L L+ A
Sbjct: 867 KMLSRALNADEIVWTILINGLLGA 890
>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 665
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/316 (28%), Positives = 147/316 (46%), Gaps = 6/316 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
E L ++RM E F + +N L+ C+ +M EA SV K+ + +PN T
Sbjct: 337 EALNIWNRMAEEGF----EPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTY 392
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ GF ++GD+ +++M+ G P+VV Y ++ C+ F A L E+M
Sbjct: 393 GALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMST 452
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T T I G + A LF +M + P+I YN ++ L++ +
Sbjct: 453 DNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKE 512
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+EL+ EMEEK + + VTY+T+F G E KL +M+ G P T L
Sbjct: 513 ALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTY 572
Query: 396 FFCVNFRVDLGLNLWGYLIDRG-FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C+ +V + L L G + P A L+ G+C++ EEA +ML
Sbjct: 573 AYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGIC 632
Query: 455 VSEASYRMLQRYLVQA 470
++ A++ L R L +
Sbjct: 633 LNAATWNALVRGLFNS 648
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 82/366 (22%), Positives = 157/366 (42%), Gaps = 15/366 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + L L + D A +L+ + P ++ S + ++S +SK EE
Sbjct: 182 PNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVV---SYTTVISSMSKLGKVEEA 238
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E R + + V +N L+ FC + ++KE + +++ + PN T +
Sbjct: 239 RELSIRFQPNVSV---------YNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYST 289
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G+V + +M +RG P+V T+ + GY +G +A+ ++ M
Sbjct: 290 VISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEG 349
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ TLIHG + +A + +M + P++ Y A+I + DL A
Sbjct: 350 FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGAS 409
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
E+ ++M + V Y +M L +SS L ++M P T T +K
Sbjct: 410 EIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGL 469
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + RV+ +NL+ + G P+ + ++ GL R +EA E +M + +++
Sbjct: 470 CCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNL 529
Query: 458 ASYRML 463
+Y +
Sbjct: 530 VTYNTI 535
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/320 (21%), Positives = 130/320 (40%), Gaps = 35/320 (10%)
Query: 164 RMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS------------- 206
+M I+ +++ G E +N+LL+A C + A + V++ +
Sbjct: 166 QMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTV 225
Query: 207 ------------------RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
RF PN N L+ GF V + + +MV +G P+V+
Sbjct: 226 ISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVI 285
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY+ I G A+ ++ +M C P++ T T+L+ G + + +A +++ M
Sbjct: 286 TYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ +P++ AYN +I L + A+ + +ME + TY + G K+ L
Sbjct: 346 AEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDL 405
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
G +++++M+ +P ++ C + +L + P+ +
Sbjct: 406 VGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTF 465
Query: 429 VTGLCSRGRWEEAFECSKQM 448
+ GLC GR E A QM
Sbjct: 466 IKGLCCSGRVECAINLFCQM 485
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 96/202 (47%), Gaps = 4/202 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
FN ++ C ++ A ++F ++ +PN KT N +L G KE+ A+E+ EM
Sbjct: 462 FNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELV-TEM 520
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G ++VTYN G+C G F +A++L +M P T TL + + +
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580
Query: 299 HQARQLFDEMPKRN-LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A QL D++ P++ AY +++ + + A+ +D+M + I + T++
Sbjct: 581 KTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWNA 640
Query: 358 MFFGLMKSSGLEGVCKLYDRMI 379
+ GL S G G + D ++
Sbjct: 641 LVRGLFNSLGHLGPIHILDDIL 662
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 111/270 (41%), Gaps = 6/270 (2%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T I++ DV ++ +M L G S + I+ Y + G A+++F +
Sbjct: 81 TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P+++ L+ ++ M + +P++ YN ++ +L + +
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L+ EM K D V+Y T+ + K +E R + +F P L
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-----RELSIRFQPNVSVYNAL 255
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FC ++V L G ++++G P+ +++ L G E A +M VR
Sbjct: 256 INGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC 315
Query: 454 QVSEASYRMLQR-YLVQANANEKLEDLDRM 482
+ ++ L + Y ++ E L +RM
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRM 345
>gi|414591138|tpg|DAA41709.1| TPA: hypothetical protein ZEAMMB73_028111 [Zea mays]
Length = 583
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 144/313 (46%), Gaps = 5/313 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + + F+ M+ VG + ++ A+C M+ A
Sbjct: 246 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYL----YTAVINAYCRAGNMRRA 301
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
V + + PN +T +L+ GF + G + A EM +M +G + + +N IDG
Sbjct: 302 AKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 361
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+KG DA+++ ME++ + T TL G V + +A+ L M + + P+
Sbjct: 362 YCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPN 421
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y +IS + D+ A L EM EK VTY+ M G K + +
Sbjct: 422 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRK 481
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + FVP T L+ CVN +VD+ L L+ + RG P+ A L++GL G
Sbjct: 482 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 541
Query: 437 RWEEAFECSKQML 449
R E AF+ ML
Sbjct: 542 RSEAAFQLYDDML 554
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 101/200 (50%), Gaps = 5/200 (2%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGF 222
+I + K G E +N L C + EA+++ + + PN T L+
Sbjct: 373 KIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIH 432
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ GD+ + EM +G PSVVTYN+ IDGY KKG +A R +EME+ +P +
Sbjct: 433 CKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIREAERFRKEMEKKGFVPDV 492
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +L+HG + + A +LF+EM +R +P++ AY A+IS L + AA +L D+
Sbjct: 493 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 552
Query: 343 MEEKRIGHDNVTYHTMFFGL 362
M + + D+ Y + L
Sbjct: 553 MLKAGLIPDDSLYSALVGSL 572
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 98/226 (43%), Gaps = 1/226 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ +C + + +A + + + T N L G + + H M+
Sbjct: 355 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 414
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY I +CK G +A RLF EM PS+ T +I G +I
Sbjct: 415 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIDGYTKKGSIR 474
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM K+ PD+ Y +++ ++ A++L +EM+++ + V Y +
Sbjct: 475 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALI 534
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
GL K E +LYD M++ +P L+ + R D+
Sbjct: 535 SGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDV 580
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/227 (23%), Positives = 97/227 (42%), Gaps = 2/227 (0%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++++ G +SG V +M G + + YN +D Y ++ G + E ME
Sbjct: 181 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 240
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
++ T T L+ R+I + LF+EM N+ D+ Y A+I++ R ++
Sbjct: 241 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 300
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLM 394
A +++DE + + TY + G K +E L M +G+ V + + ++
Sbjct: 301 AAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADM-QGQGVGLNQIIFNTMI 359
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+C VD L + + G + + L GLC R +EA
Sbjct: 360 DGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 406
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/203 (19%), Positives = 87/203 (42%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
S + ++ +DG CK G DA RL ++M R + +L+ ++ + +++
Sbjct: 176 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 235
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+ M ++ +G Y ++ SL RD++ L +EM+ + D Y + ++
Sbjct: 236 EIMENEGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRA 295
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ K+ D + P RT +L+ FC +++ L + +G +
Sbjct: 296 GNMRRAAKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIF 355
Query: 426 DLLVTGLCSRGRWEEAFECSKQM 448
+ ++ G C +G ++A + M
Sbjct: 356 NTMIDGYCRKGMVDDALKIKAAM 378
>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Cucumis sativus]
Length = 857
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 165/347 (47%), Gaps = 14/347 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ F + I L R D+A L+ + + P +++ ++ I F + +
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL------ICGFCKHSKL 302
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNI 217
+EA + + + G+ +N ++ FC M+ A + + F P+ T +
Sbjct: 303 VEAECYLHKMVNSGVEP-NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 218 LLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G GD+ AM +FY M +GF+ S++ YN + G K+G A++L ++M
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T +++G + + A + ++ + PDI +N +I + R+++ A
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+E++D M I D +TY+T+ GL K+ L+ V + M+E P T +L++
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
FC + +V + L+ + RG P L L+ GLCS G ++A+E
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 44/371 (11%)
Query: 111 HILARMRYFD---QAWELMSHVQRTHPSLLTLKSMSIMLSRIS---KFQSYEETLEAF-- 162
H+ A +RY + A ++ + V+ TL++ M+ ++ KF++ E+ L
Sbjct: 9 HVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK 68
Query: 163 ---DRMEREIFVGI-RKFGS-----------------------EEFNVLLQAFCTQKEMK 195
+M +++GI R +G + +N ++
Sbjct: 69 NVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFS 128
Query: 196 EARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+A V++++ P+ T I + F +G TA + M +G + V+Y I
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G+ K+ C +A LF+EM + P + T LIH N+ ++ +LF ++ KR +
Sbjct: 189 SGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC 248
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCK 373
P++ +N I L R ++ A L++ + + + D ++Y+T+ G K S L E C
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID---RGFCPHGHALDLLVT 430
L+ +M+ P T ++ FC + + N L D +GF P L+
Sbjct: 309 LH-KMVNSGVEPNEFTYNTIINGFC---KAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 431 GLCSRGRWEEA 441
GLC+ G A
Sbjct: 365 GLCNDGDMNRA 375
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 109/263 (41%), Gaps = 2/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A + +++ P+ T N L+ G+ + ++ M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TYN ++G CK + + F+ M C P++ T LI R +
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME-EKRIGHDNVTYHTM 358
+A +LF EM R L PDI +I L +L+ A EL +E E + + ++ M
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ + KL+ +M P T +++ +C +DL I +G
Sbjct: 609 INAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P ++ LC R EA
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEA 691
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 169/431 (39%), Gaps = 57/431 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ ++ ++IL YF QA ++ ++ +P + T +I +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYT---HTIRMKSFCITGRPTAA 165
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L + M + G +F + + ++ F + EA +F ++L + P+ T N
Sbjct: 166 LRLLNNMPGQ---GC-EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ + G+V E + +++ RG P++ T+NI I G C+KG +A RL E +
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 278 CLPSLQTITTLIHG--------------------------------------AGLVRNIH 299
P + + TLI G AG+++N
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN-- 339
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ + + PD Y+++I+ L D+N AM + E EK H + Y+T+
Sbjct: 340 -ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +L M+E P T +++ C + + I +G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ G C + ++A E ML +Y L L +A L
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA------RKL 512
Query: 480 DRMIKNLQAVL 490
D ++ +A+L
Sbjct: 513 DNVVDTFKAML 523
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/251 (22%), Positives = 103/251 (41%), Gaps = 14/251 (5%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV- 129
N L + N KA+E L H TP + L+ L + R D + +
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 130 -QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQA 187
+ P+++T +I++ K + E +E F M+ R + I + L+
Sbjct: 524 EKGCTPNIITY---NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT-----LICG 575
Query: 188 FCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C+ E+ +A +FV + +F+ + NI++ F E +V+ E +H+M P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAP 635
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
TY + ID YCK G A E +PS T +++ + + +A +
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 306 DEMPKRNLKPD 316
+ M + + P+
Sbjct: 696 NLMVQNGIVPE 706
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 109/252 (43%), Gaps = 13/252 (5%)
Query: 103 PD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F + + R D+A E++ + P ++T ++ L + K + +T
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A +E+ I + N+L+++FC +++ EA +F ++ +R P+ T+
Sbjct: 519 FKAM--LEKGCTPNIITY-----NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 218 LLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +G++ A E+F F S +NI I+ +C+K A +LF +M
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P T +I NI A E + L P +++ L L+ A
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 337 MELMDEMEEKRI 348
+ +++ M + I
Sbjct: 692 VVIINLMVQNGI 703
>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
Length = 609
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 110/400 (27%), Positives = 177/400 (44%), Gaps = 23/400 (5%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETL 159
PDAF T I A D M H++ P+++T ++ +R K EE +
Sbjct: 144 APDAFTHTPIITAMANAGDLDGA-MDHLRSMGCDPNVVTYTALIAAFARAKKL---EEAM 199
Query: 160 EAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKT 214
+ + M R+ G +NVL+ A C + A+ V K++ FAPN T
Sbjct: 200 KLLEEM--------RERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMT 251
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ GF + G+V MV +G RP+VVTY+ IDG CK F +A + EEM+
Sbjct: 252 FNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMK 311
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P T + LIHG I +A Q+ M PD+ Y+++I + + L
Sbjct: 312 TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLL 371
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVML 393
A + + EM ++R D VTY+T+ GL K + + ++M E G +P T +
Sbjct: 372 EAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTV 431
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ C + + L + G P ++ GLC GR EEA + M
Sbjct: 432 INGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGC 491
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ +Y L L +A K+++ +R+++ ++ PP
Sbjct: 492 APNVVTYTTLISGLCKA---RKVDEAERVMEEMRNAGCPP 528
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 124/264 (46%), Gaps = 12/264 (4%)
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+E+GD +F E+ L P V +YNI I G+C G A+ L EEM+ P
Sbjct: 94 REAGD-----LFRSEL-LASCEPDVCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDA 147
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T T +I ++ A D + P++ Y A+I++ R + L AM+L++E
Sbjct: 148 FTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEE 204
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M E+ + VTY+ + L K S + + +MIEG F P T L+ FC
Sbjct: 205 MRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGN 264
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD L G ++ +G P+ L+ GLC ++ EA E ++M R +Y
Sbjct: 265 VDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSA 324
Query: 463 LQRYLVQANANEKLEDLDRMIKNL 486
L L +A +K+E+ ++M++ +
Sbjct: 325 LIHGLCKA---DKIEEAEQMLRRM 345
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 153/358 (42%), Gaps = 17/358 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P F + + D A +L+ + P+++T S ++ + K Q +
Sbjct: 245 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTY---SALIDGLCKSQKFL 301
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
E E + M+ R + F + L+ C +++EA + ++ S P+
Sbjct: 302 EAKEVLEEMK------TRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVV 355
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ ++ F +SG + + EM + P VVTYN IDG CK G +A + E+M
Sbjct: 356 VYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQM 415
Query: 274 ERVA-CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ LP + T +T+I+G + +A++L D M K PD+ Y +I L +C
Sbjct: 416 QESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGR 475
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L A L+ M+ + VTY T+ GL K+ ++ ++ + M P T
Sbjct: 476 LEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNT 535
Query: 393 LMKFFCVNFRVDLGLNLWGYLID-RGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ CV+ R+ L + D R C P +V L S +EA + +QM
Sbjct: 536 MVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593
>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
Length = 457
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 165/353 (46%), Gaps = 10/353 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P + L L + + F++A + + Q P++ S SI+++ + + Q +E
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF---SYSILIAGLCRGQKVDE 105
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-N 216
E + E+ G + + LL C ++KEA +F +++ R P + + N
Sbjct: 106 AAELLN----EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L+ GF + GD+ + EM+ +G P+V TYN + G+ +KG FG LF++M R
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C+P++ T L+ G + ++ +A +LF EM PD+ +YN +I + + A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEA 281
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L+ EM +G D V+Y+ + G KS L+ KL+ + + P + ++
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
C +V ++ +I G P + LV GLC R E+ E + M+
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/347 (27%), Positives = 169/347 (48%), Gaps = 12/347 (3%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMSH-VQRTH-PSLLTLKSMSIMLSRISKFQSYEE 157
+P+ F ++ I L R + D+A EL++ + H P+++T S+ LS + K +E
Sbjct: 84 SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL---LSGLCKMGKLKE 140
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
++ F RM ++ G G +NVL+ F + +M EA +F ++L + P T N
Sbjct: 141 AVDLFSRM---VYRGCPPDGVV-YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL GF G+ ++ + +M+ +G P++ T+N +DG+CK G +A RLF EM +
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + + TLI G H+A++L EM + + PDI +YN +I + L+ A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++L E+ + + D +Y T+ L ++ + ++ MI P V+ L+
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C R+ L+ ++ P +LL+ LC R ++ E
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 116/288 (40%), Gaps = 1/288 (0%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
G+ +N LL+ + +L+ PN T LL ++ +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M +G P+V +Y+I I G C+ +A L EM P++ T +L+ G +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A LF M R PD YN +I + D+ A L +EM EK TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+++ G + V L+ M+ VP T L+ FC + L+ +
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P + + L+ G+CS+G+ EA ++M+ SY +L
Sbjct: 256 LGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL 303
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
+V NVL F+ + +A F+ L+ PT + L +R F + L
Sbjct: 158 VVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 128 HV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EF 181
+ Q P++ T ++ + F + +EA +F+ +R G +
Sbjct: 217 DMLRQGCVPNIFTFNNL------LDGFCKMGDMVEA-----HRLFLEMRSLGCPPDVVSY 265
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMV 239
N L++ C++ + EA+ + +++ S P+ + NIL+ G+ +SG + A+++FY E+
Sbjct: 266 NTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY-EIP 324
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +Y+ ID C+ G G A +F++M P + L+ G +
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ +LF M K P I YN ++ L + + + E+ E+ E+ D
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ ++YN ++ K G + +M C+P+ T L+ + +AR
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+F M + P++ +Y+ +I+ L R + ++ A EL++EM + + VTY ++ GL
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K L+ L+ RM+ P +L+ F + L+ ++++G P
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
+ L++G +G + K ML
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDML 219
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
H ++Y+ + L KS + V Y+ M+ VP T T L++ C R + ++
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + +G P+ + +L+ GLC + +EA E +M+ Q + +Y L L +
Sbjct: 75 FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134
Query: 470 -ANANEKLEDLDRMI 483
E ++ RM+
Sbjct: 135 MGKLKEAVDLFSRMV 149
>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 639
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 136/272 (50%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ +FC K + +A ++ +++ + PN T N L+ GF G + +EM
Sbjct: 197 YTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMS 256
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L P+V T+NI IDG CK+G A + M + P++ T T+L+ G LV+ ++
Sbjct: 257 LNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVN 316
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ + R + P++ +Y+ MI+ L + + ++ A++L EM K + + VTY ++
Sbjct: 317 KAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLI 376
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + V L D + T L+ C N +VD + L + D G
Sbjct: 377 DGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQ 436
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P LV GLC GR ++A + +L +
Sbjct: 437 PDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCK 468
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/334 (24%), Positives = 153/334 (45%), Gaps = 2/334 (0%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSR 207
I F + ++A+D + E+ V FN L+ FC ++KEA + ++ L+
Sbjct: 201 IDSFCKDKLVIDAYD-LYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNN 259
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T NIL+ G + G+V M+ +G P+VVTY +DGY A
Sbjct: 260 VNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAK 319
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+F + P++ + + +I+G + + +A +LF EM +N+ P+ Y+++I L
Sbjct: 320 HVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGL 379
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ ++ +L+DE+ + + +TY+++ GL K+ ++ L +M + P
Sbjct: 380 CKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDM 439
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ C N R+ ++ L+ +G+ + +++ GLC G ++EA Q
Sbjct: 440 STYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQ 499
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
M +Y L L + N N K L R
Sbjct: 500 MEDNGCMPDAVTYETLISALFKNNKNGKAVKLLR 533
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 83/363 (22%), Positives = 168/363 (46%), Gaps = 21/363 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+T D+F K ++ A++L S V++ +P+++T S+ + + +
Sbjct: 197 YTAIIDSFCKDKLVI-------DAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAV 249
Query: 157 ETLE--AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
L + + + ++ FN+L+ C + E+K+A SV ++ + PN
Sbjct: 250 GLLNEMSLNNVNPNVYT---------FNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVV 300
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ G+ +V + ++ + LRG P+V +Y++ I+G CK +A++LF+EM
Sbjct: 301 TYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEM 360
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P+ T ++LI G I L DE+ R +I YN++++ L + +
Sbjct: 361 HLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQV 420
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A+ L+ +M+++ I D TY T+ GL K+ L+ ++Y ++ + R ++
Sbjct: 421 DKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVM 480
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ C D L+L + D G P + L++ L + +A + ++M+ R
Sbjct: 481 INGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIARES 540
Query: 454 QVS 456
S
Sbjct: 541 DCS 543
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 85/394 (21%), Positives = 168/394 (42%), Gaps = 11/394 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMS 143
A+ F L + TP F K L L +M +F A ++ P + T +
Sbjct: 36 AVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNILI 95
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
S + + AF + + + +G + + N LL+ C ++KEA +
Sbjct: 96 NCFSHLCQLNF------AFSMVAKILKLGYQP-DTVTVNTLLRGLCLNGKVKEALNFHDH 148
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ RF + + L+ G +SG+ A+++ L RP V+ Y ID +CK
Sbjct: 149 VIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDK 208
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
DA L+ EM P++ T +LI+G +V + +A L +EM N+ P++ +N
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFN 268
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L + ++ A ++ M ++ + + VTY ++ G + +++ +
Sbjct: 269 ILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLR 328
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P + +++ C N VD + L+ + + P+ L+ GLC GR +
Sbjct: 329 GVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDV 388
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
++ ++ R + + +Y L L + + +K
Sbjct: 389 WDLIDEINNRGQPANIITYNSLLNGLCKNHQVDK 422
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 175/398 (43%), Gaps = 24/398 (6%)
Query: 102 TPDAF---EKTLHILARMRYFDQAWELMS------HVQRTHPSLLTLKSMSIMLSRISKF 152
TP++F + LHI + D + +S H+ P + + L +++ F
Sbjct: 10 TPNSFLLLNRRLHIQPLPSFIDNLDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHF 69
Query: 153 Q---SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RF 208
+ S+ + +E ++ E+F FN+L+ F ++ A S+ K+L +
Sbjct: 70 KIAISFSQQME-LKGIQPEMFT---------FNILINCFSHLCQLNFAFSMVAKILKLGY 119
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T+N LL G +G V F+ ++ + F V+Y I+G CK G A++
Sbjct: 120 QPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQ 179
Query: 269 LFEEMERVACL-PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L ++E + + P + T +I + + A L+ EM + + P++ +N++I
Sbjct: 180 LLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGF 239
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
L A+ L++EM + + T++ + GL K ++ + MI+ P
Sbjct: 240 CIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNV 299
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T LM + + V+ +++ + RG P+ H+ +++ GLC +EA + K+
Sbjct: 300 VTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKE 359
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
M ++ + +Y L L ++ + DL I N
Sbjct: 360 MHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINN 397
>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL + + H P + + L + A L + +Q P L T S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M + ++ E+ L+ + +ER+I + + N L+ AF + + EA ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAEELY 348
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T + ++ GF + + A E ++ M +G P+++T+N IDGYC
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D M L EM + T TLIHG LV +++ A L EM
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL +EM + I D +TY +M GL K S L+ +++D M F P T L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG + L+ G G A + ++M+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 48/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ +A + ++L R +P+ T N L+ F + G E Y EM+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TY+ IDG+CK+ A +F M C P+L T TLI G + I
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L+ EM + D VT T+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ L+ G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M R + +Y ++ + N N L+ MI +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A EM+
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT + +DG C G DA+ +F+ M++ P +QT L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI L + L+ A ++ D M K
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT+ T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++TGL S+ + A
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 168/393 (42%), Gaps = 14/393 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFF-KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
N+L + F + S AL F K T H P F LH L +A + +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 130 QRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
T P+++T ++ L R + E + DRM + G++ + ++
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIV---EAVALLDRMMED---GLQP-TQITYGTIVDG 228
Query: 188 FCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + + A ++ K+ +S PN + ++ + G + + + EM +G P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ TYN I G+C G + DA +L +EM P + T LI+ +A +L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
DEM R + P+ Y++MI + L+AA + M K + +T++T+ G +
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ +L M E V T T L+ F + ++ L+L +I G CP
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
D L+ GLC G+ ++A E K M ++ + +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 156/367 (42%), Gaps = 29/367 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++NI I +C A+ F ++ ++ P + T TTL+HG + + +A F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+ ++ G CS GRW +A + ++ML R+ +Y L V+ + E+L D M+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 485 NLQAVLP 491
+ ++P
Sbjct: 354 --RGIIP 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-----FVGIRKFGSEEFNVLLQAF 188
P ++T ++ L K + E + + ++++ F G+ + +N+L+
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP-DVQTYNILISGL 521
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R P+ T + ++ G + + + M + F P+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+ I+GYCK G D + LF EM R + + T TLI G V NI+ A +F E
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD M++ L +L A+ ++++++
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 96/376 (25%), Positives = 170/376 (45%), Gaps = 43/376 (11%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + K + Y + F + E GI ++L+ FC Q + A SVF +
Sbjct: 64 ILSSLVKNKRYPTVISLFKQFEPN---GITP-DLCTLSILINCFCHQAHITLAFSVFANI 119
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF-------------------- 243
L R F P+ T+N L+ G G++ F+ ++V +GF
Sbjct: 120 LKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGET 179
Query: 244 ---------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+P VV YN I+ CK GDA ++ EM P + T TTL
Sbjct: 180 KAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTL 239
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR---CRDLNAAMELMDEMEE 345
IHG ++ + +A L +EM +N+ PD+ ++ +I +L + + ++ AM L +EM+
Sbjct: 240 IHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKH 299
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K + D VTY+++ GL K+ LE L M E P + +L+ C R+++
Sbjct: 300 KNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEI 359
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ +L+ +G + ++++ GLC G + EA + +M + + ++R +
Sbjct: 360 AKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIIC 419
Query: 466 YLVQANANEKLEDLDR 481
L + + N+K E + R
Sbjct: 420 ALSEKDENDKAEKILR 435
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 6/204 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVT----AMEMFY 235
+ L+ FC +MKEA S+ ++ L P+ T ++L+ + G AM +F
Sbjct: 236 YTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLF- 294
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM + P +VTYN IDG CK A+ L +EM+ P + + T L+ G
Sbjct: 295 EEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKG 354
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A++ F + + ++ YN MI+ L + AM+L +ME K + +T+
Sbjct: 355 GRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITF 414
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMI 379
T+ L + + K+ MI
Sbjct: 415 RTIICALSEKDENDKAEKILREMI 438
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/230 (22%), Positives = 97/230 (42%), Gaps = 2/230 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ M+L P +N + K + + LF++ E P L T++ LI+
Sbjct: 46 FNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 105
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+I A +F + KR PD N +I L ++ + D++ + D V+
Sbjct: 106 QAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVS 165
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y T+ GL K+ + V +L R +EG V P ++ C N + +++ +
Sbjct: 166 YGTLINGLCKAGETKAVARLL-RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEM 224
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
I +G P L+ G C G+ +EAF +M ++ ++ +L
Sbjct: 225 IVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVL 274
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 58/127 (45%)
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ + L+K+ V L+ + P T+ +L+ FC + L +++ ++
Sbjct: 61 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 120
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
RGF P L+ L+ GLC RG ++ Q++ + Q+ + SY L L +A +
Sbjct: 121 KRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETK 180
Query: 475 KLEDLDR 481
+ L R
Sbjct: 181 AVARLLR 187
>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL + + H P + + L + A L + +Q P L T S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M + ++ E+ L+ + +ER+I + + N L+ AF + + EA ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAEELY 348
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T + ++ GF + + A E ++ M +G P+++T+N IDGYC
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D M L EM + T TLIHG LV +++ A L EM
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL +EM + I D +TY +M GL K S L+ +++D M F P T L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG + L+ G G A + ++M+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 48/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ +A + ++L R +P+ T N L+ F + G E Y EM+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TY+ IDG+CK+ A +F M C P+L T TLI G + I
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L+ EM + D VT T+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ L+ G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M R + +Y ++ + N N L+ MI +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A EM+
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT + +DG C G DA+ +F+ M++ P +QT L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI L + L+ A ++ D M K
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT+ T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++TGL S+ + A
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 155/362 (42%), Gaps = 11/362 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P F LH L +A L + T P+++T ++ L R + E
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV---EA 203
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+ DRM + G++ + ++ C + + A ++ K+ +S PN +
Sbjct: 204 VALLDRMMED---GLQP-TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ + G + + + EM +G P + TYN I G+C G + DA +L +EM
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T LI+ +A +L+DEM R + P+ Y++MI + L+AA
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ M K + +T++T+ G + ++ +L M E V T T L+
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F + ++ L+L +I G CP D L+ GLC G+ ++A E K M ++ +
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 457 EA 458
+
Sbjct: 500 AS 501
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 29/367 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++ I I +C A+ F ++ ++ P + T TL+HG + + +A LF
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+ ++ G CS GRW +A + ++ML R+ +Y L V+ + E+L D M+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 485 NLQAVLP 491
+ ++P
Sbjct: 354 --RGIIP 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-----FVGIRKFGSEEFNVLLQAF 188
P ++T ++ L K + E + + ++++ F G+ + +N+L+
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP-DVQTYNILISGL 521
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R P+ T + ++ G + + + M + F P+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+ I+GYCK G D + LF EM R + + T TLI G V NI+ A +F E
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD M++ L +L A+ ++++++
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL + + H P + + L + A L + +Q P L T S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M + ++ E+ L+ + +ER+I + + N L+ AF + + EA ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAEELY 348
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T + ++ GF + + A E ++ M +G P+++T+N IDGYC
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D M L EM + T TLIHG LV +++ A L EM
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL +EM + I D +TY +M GL K S L+ +++D M F P T L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG + L+ G G A + ++M+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 48/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ +A + ++L R +P+ T N L+ F + G E Y EM+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TY+ IDG+CK+ A +F M C P+L T TLI G + I
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L+ EM + D VT T+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ L+ G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M R + +Y ++ + N N L+ MI +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A EM+
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT + +DG C G DA+ +F+ M++ P +QT L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI L + L+ A ++ D M K
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT+ T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++TGL S+ + A
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/393 (24%), Positives = 168/393 (42%), Gaps = 14/393 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFF-KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
N+L + F + S AL F K T H P F LH L +A L +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEALNLFHQM 175
Query: 130 QRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
T P+++T ++ L R + E + DRM + G++ + ++
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIV---EAVALLDRMMED---GLQP-TQITYGTIVDG 228
Query: 188 FCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + + A ++ K+ +S PN + ++ + G + + + EM +G P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ TYN I G+C G + DA +L +EM P + T LI+ +A +L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELY 348
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
DEM R + P+ Y++MI + L+AA + M K + +T++T+ G +
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ +L M E V T T L+ F + ++ L+L +I G CP
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
D L+ GLC G+ ++A E K M ++ + +
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDAS 501
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/367 (23%), Positives = 157/367 (42%), Gaps = 29/367 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++NI I +C A+ F ++ ++ P + T TTL+HG + + +A LF
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+ ++ G CS GRW +A + ++ML R+ +Y L V+ + E+L D M+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 485 NLQAVLP 491
+ ++P
Sbjct: 354 --RGIIP 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-----FVGIRKFGSEEFNVLLQAF 188
P ++T ++ L K + E + + ++++ F G+ + +N+L+
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP-DVQTYNILISGL 521
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R P+ T + ++ G + + + M + F P+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+ I+GYCK G D + LF EM R + + T TLI G V NI+ A +F E
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD M++ L +L A+ ++++++
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
Length = 687
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 167/415 (40%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL + + H P + + L + A L + +Q P L T S
Sbjct: 236 VSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNS 295
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M + ++ E+ L+ + +ER+I + + N L+ AF + + EA ++
Sbjct: 296 MIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAEELY 348
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T + ++ GF + + A E ++ M +G P+++T+N IDGYC
Sbjct: 349 DEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGA 408
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D M L EM + T TLIHG LV +++ A L EM
Sbjct: 409 KRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTC 468
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 469 DTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFL 528
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL +EM + I D +TY +M GL K S L+ +++D M F P T L+
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG + L+ G G A + ++M+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMI 643
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 145/353 (41%), Gaps = 48/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ +A + ++L R +P+ T N L+ F + G E Y EM+
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEML 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TY+ IDG+CK+ A +F M C P+L T TLI G + I
Sbjct: 353 PRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRID 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L+ EM + D VT T+
Sbjct: 413 DGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLL 472
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 473 DGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 532
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ L+ G C
Sbjct: 533 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYC 592
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M R + +Y ++ + N N L+ MI +
Sbjct: 593 KAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISS 645
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A EM+
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT + +DG C G DA+ +F+ M++ P +QT L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI L + L+ A ++ D M K
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT+ T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++TGL S+ + A
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 670
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 86/362 (23%), Positives = 155/362 (42%), Gaps = 11/362 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P F LH L +A L + T P+++T ++ L R + E
Sbjct: 147 PDVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIV---EA 203
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+ DRM + G++ + ++ C + + A ++ K+ +S PN +
Sbjct: 204 VALLDRMMED---GLQP-TQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYS 259
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ + G + + + EM +G P + TYN I G+C G + DA +L +EM
Sbjct: 260 AIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLER 319
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T LI+ +A +L+DEM R + P+ Y++MI + L+AA
Sbjct: 320 KISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAA 379
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ M K + +T++T+ G + ++ +L M E V T T L+
Sbjct: 380 EHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHG 439
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F + ++ L+L +I G CP D L+ GLC G+ ++A E K M ++ +
Sbjct: 440 FYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLD 499
Query: 457 EA 458
+
Sbjct: 500 AS 501
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/367 (23%), Positives = 155/367 (42%), Gaps = 29/367 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++ I I +C A+ F ++ ++ P + T TL+HG + + +A LF
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+ ++ G CS GRW +A + ++ML R+ +Y L V+ + E+L D M+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353
Query: 485 NLQAVLP 491
+ ++P
Sbjct: 354 --RGIIP 358
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 100/217 (46%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-----FVGIRKFGSEEFNVLLQAF 188
P ++T ++ L K + E + + ++++ F G+ + +N+L+
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEP-DVQTYNILISGL 521
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R P+ T + ++ G + + + M + F P+V
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNV 581
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+ I+GYCK G D + LF EM R + + T TLI G V NI+ A +F E
Sbjct: 582 VTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQE 641
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD M++ L +L A+ ++++++
Sbjct: 642 MISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKLQ 678
>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62670, mitochondrial; Flags: Precursor
gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
Length = 630
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 10/332 (3%)
Query: 120 DQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A+ L++ ++ + P +L ++ + + K++ ++ L F ME + GIR
Sbjct: 238 DLAFNLLNKMEQGKLEPGVLIYNTI---IDGLCKYKHMDDALNLFKEMETK---GIRP-N 290
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ C +A + ++ R P+ T + L+ F + G + E Y
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV R PS+VTY+ I+G+C +A ++FE M C P + T TLI G +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + ++F EM +R L + YN +I L + D + A E+ EM + + +TY+
Sbjct: 411 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL K+ LE +++ + K P T ++++ C +V+ G +L+ L +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P A + +++G C +G EEA K+M
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 167/376 (44%), Gaps = 16/376 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PSLLTLKSMSIMLSRISKFQSYEETL 159
P+ F K L +A+M FD L +Q P + SI+++ + L
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH--NHYTYSILINCFCRRSQLPLAL 136
Query: 160 EAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKT 214
+M K G E + LL +C K + EA ++ ++ ++ + PN T
Sbjct: 137 AVLGKM--------MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVT 188
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G + MV +G +P +VTY + ++G CK+G A L +ME
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P + T+I G +++ A LF EM + ++P++ Y+++IS L +
Sbjct: 249 QGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWS 308
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ +M E++I D T+ + +K L KLYD M++ P T L+
Sbjct: 309 DASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLI 368
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
FC++ R+D ++ +++ + P + L+ G C R EE E ++M R
Sbjct: 369 NGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLV 428
Query: 455 VSEASYRMLQRYLVQA 470
+ +Y +L + L QA
Sbjct: 429 GNTVTYNILIQGLFQA 444
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
F+ DAF K ++ + +D+ V+R+ PS++T S+ ++ +E
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEM------VKRSIDPSIVTYSSL---INGFCMHDRLDE 379
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ F+ M + F + + N L++ FC K ++E VF ++ R N T
Sbjct: 380 AKQMFEFMVSKHCFPDVVTY-----NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 434
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ G ++GD + + EMV G P+++TYN +DG CK G AM +FE ++R
Sbjct: 435 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T +I G + LF + + +KPD+ AYN MIS R
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A L EM+E ++ Y+T+ ++ E +L M F T+
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 117/287 (40%), Gaps = 36/287 (12%)
Query: 234 FYHEMVLRGFRPSVVTY-----------------------------------NIRIDGYC 258
+ EMV PS++ + +I I+ +C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFC 127
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
++ A+ + +M ++ P++ T+++L++G + I +A L D+M +P+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I L + AM L+D M K D VTY + GL K + L ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+GK P ++ C +D LNL+ + +G P+ L++ LC+ GRW
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+A M+ R+ ++ L V+ + E L D M+K
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 76/172 (44%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF EM K P I ++ ++S++ + + + L ++M+ I H++ TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S L + +M++ + P T+ L+ +C + R+ + L + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ P+ + L+ GL + EA +M+ + Q +Y ++ L +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 76/184 (41%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF EM + PS+ + L+ + L ++M + + Y+ +I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILI 123
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L A+ ++ +M + + VT ++ G S + L D+M +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ +G P ++V GLC RG + AF
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNL 243
Query: 445 SKQM 448
+M
Sbjct: 244 LNKM 247
>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g39710-like [Brachypodium distachyon]
Length = 718
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 168/374 (44%), Gaps = 10/374 (2%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L R A +AL ++ P + + R D A L+ ++
Sbjct: 158 NILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMR 217
Query: 131 R--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
PSL+T ++ ++ + K E+ + FD M RE G+ G +N L+ +
Sbjct: 218 EGGVRPSLVTFNTV---VNGLCKAGRMEDARKMFDEMARE---GLTPDGVS-YNTLVSGY 270
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C + EA +VF ++ + P+ T L+ +G++ +M RG R +
Sbjct: 271 CKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNE 330
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
T+ IDG+C+ G DA+ +EM PS+ LI+G + + +AR+L E
Sbjct: 331 FTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHE 390
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M + +KPD+ Y+ ++S + D ++A EL +M +K + D +TY ++ GL +
Sbjct: 391 MEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERR 450
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L C+L+++M++ P T L+ C V L+L +I +G P +
Sbjct: 451 LGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSV 510
Query: 428 LVTGLCSRGRWEEA 441
L+ GL R +EA
Sbjct: 511 LIDGLSKSARTKEA 524
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 141/291 (48%), Gaps = 2/291 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L++A C + + +EA V + + APN T N L+ F +G+V A E M
Sbjct: 157 YNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVM 216
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G RPS+VT+N ++G CK G DA ++F+EM R P + TL+ G +
Sbjct: 217 REGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCL 276
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
H+A +F EM ++ + PD+ + ++I ++ R +L A+ L+ +M E+ + + T+ +
Sbjct: 277 HEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTAL 336
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G ++ L+ M E + P +L+ +C R+D L + +G
Sbjct: 337 IDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGM 396
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P +++G C G + AFE +++ML + +Y L R L +
Sbjct: 397 KPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCE 447
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 140/313 (44%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AFC E+ A R V V P+ T N ++ G ++G + + EM
Sbjct: 193 YNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMA 252
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+YN + GYCK GC +A+ +F EM + +P + T T+LIH N+
Sbjct: 253 REGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLE 312
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M +R L+ + + A+I R L+ A+ M EM E RI V Y+ +
Sbjct: 313 RAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLI 372
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ +L M P T ++ +C D L ++ +G
Sbjct: 373 NGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVV 432
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLED 478
P L+ GLC R +A E ++ML Q E +Y ++ + + N + L
Sbjct: 433 PDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSL 492
Query: 479 LDRMIKNLQAVLP 491
D MIK + VLP
Sbjct: 493 HDEMIK--KGVLP 503
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 125/270 (46%), Gaps = 21/270 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NVL+ +C M EAR + ++ ++ P+ T + +L G+ + GD + +M+
Sbjct: 368 YNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKML 427
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +TY+ I G C++ GDA LFE+M ++ P T TTLI G N+
Sbjct: 428 KKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQ 487
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L DEM K+ + PD+ Y+ +I L + A L+ ++ + DN+ Y +
Sbjct: 488 KALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALM 547
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
C+ + ++VV L+K F + ++ ++ ++DR +
Sbjct: 548 H----------CCR----------TAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWK 587
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
G +L+ G C G +A KQ+L
Sbjct: 588 LDGSVYSVLIHGHCRGGNIMKALSFHKQLL 617
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 116/257 (45%), Gaps = 2/257 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+AP+ N +LL ++ +A + M+ G P+V TYNI + C +G +A+
Sbjct: 116 YAPSLLAYNAVLLALSDASLPSARRLL-ASMLRDGVAPNVYTYNILVRALCARGQREEAL 174
Query: 268 RLF-EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ ++M C P++ T TL+ + A +L M + ++P + +N +++
Sbjct: 175 GVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNG 234
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + + A ++ DEM + + D V+Y+T+ G K+ L ++ M + VP
Sbjct: 235 LCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPD 294
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C ++ + L G + +RG + L+ G C G ++A K
Sbjct: 295 VVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMK 354
Query: 447 QMLVRRRQVSEASYRML 463
+M R Q S Y +L
Sbjct: 355 EMRECRIQPSVVCYNVL 371
>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
Length = 629
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 170/376 (45%), Gaps = 14/376 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M+ FD L +Q S L S +I+++ + L
Sbjct: 78 PSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALA 136
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+M K G E + LL +C K + +A ++ +++ + P+ T
Sbjct: 137 VLGKM--------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTF 188
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + +MV RG +P +VTY ++G CK+G A+ L ++ME+
Sbjct: 189 NTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEK 248
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ T+I G ++I A LF++M + ++PD+ YN++IS L +
Sbjct: 249 GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSD 308
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ M E++I + VT+ + +K L KLYD MI+ P T L+
Sbjct: 309 ASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D +++ +I + P+ + L+ G C R EE E ++M R
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 456 SEASYRMLQRYLVQAN 471
+ +Y L + L QA
Sbjct: 429 NTVTYNTLIQGLFQAG 444
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 140/298 (46%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ F++ME + GIR +N L+ C +A + +
Sbjct: 261 IIDGLCKYKHIDDAFALFNKMETK---GIRP-DVFTYNSLISCLCNYGRWSDASRLLSNM 316
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN T + L+ F + G + E Y EM+ R P + TY+ I+G+C
Sbjct: 317 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 376
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A +FE M C P++ T TLI G + + + +LF EM +R L + YN +
Sbjct: 377 DEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 436
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + D + A ++ +M + D +TY + GL K LE +++ + + K
Sbjct: 437 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 496
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T ++++ C +V+ G +L+ L +G P+ +++G C +G EEA
Sbjct: 497 EPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 98/215 (45%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC K ++E +F ++ R N T N L+ G ++GD + + +MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++TY+I +DG CK G A+ +FE +++ P + T +I G +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF + + +KP++ Y MIS R A L EM+E D+ Y+T+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLI 577
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
++ +L M FV T+ M++
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 612
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 131/292 (44%), Gaps = 16/292 (5%)
Query: 103 PDAFEKTLHILARMRY--FDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F I Y + A L+S++ ++ +P+++T S ++ K E
Sbjct: 288 PDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF---SALIDAFVKEGKLVEA 344
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
+ +D M +R I I + S L+ FC + EA+ +F ++S+ PN T N
Sbjct: 345 EKLYDEMIKRSIDPDIFTYSS-----LINGFCMHDRLDEAKHMFELMISKDCFPNVVTYN 399
Query: 217 ILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ GF ++ V ME+F EM RG + VTYN I G + G A ++F++M
Sbjct: 400 TLIKGFCKAKRVEEGMELF-REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 458
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T + L+ G + +A +F+ + K ++PDI YN MI + + +
Sbjct: 459 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVED 518
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+L + K + + + Y TM G + E L+ M E +P +
Sbjct: 519 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 67/163 (41%), Gaps = 18/163 (11%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFD-----RMEREIFVGIRKFGSEEFNVLLQAF 188
P ++T SI+L + K+ E+ L F+ +ME +I+ +N++++
Sbjct: 463 PDIITY---SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT---------YNIMIEGM 510
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++++ +F L L PN ++ GF G + + EM G P
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 570
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
YN I + G + L +EM + TI+ +I+
Sbjct: 571 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Glycine max]
Length = 742
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 179/389 (46%), Gaps = 9/389 (2%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
++ LH+L ++ +A L+ ++ ++ + S S+++ + + + L+ +
Sbjct: 254 SYNIILHLLCQLGKVKEAHSLLIQME-FRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEE 312
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFK 223
++R+ G++ +N ++ C + EA V V R P+N L+ GF
Sbjct: 313 LQRK---GLKP-NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+SG+V+ + EM + P VTY I G C+ G +A +LF EM P
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEV 428
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T T LI G + +A L ++M ++ L P++ Y A++ L +C +++ A EL+ EM
Sbjct: 429 TYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEM 488
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
EK + + TY+ + GL K +E KL + M F P T T +M +C +
Sbjct: 489 SEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEM 548
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-M 462
L ++D+G P ++L+ G C G E+ K ML + + ++ +
Sbjct: 549 AKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSL 608
Query: 463 LQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+++Y ++ N +E M + Q V+P
Sbjct: 609 MKQYCIRNNMRATIEIYKGM--HAQGVVP 635
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 172/374 (45%), Gaps = 12/374 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHIL---ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
LQ P + + L R+ +Q +M + QR P + + ++S
Sbjct: 313 LQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKN-QRIFPDNVVY---TTLISGFG 368
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K + + FD M+R+ V F + + ++ C ++ EAR +F ++LS+
Sbjct: 369 KSGNVSVEYKLFDEMKRKKIV--PDFVT--YTSMIHGLCQAGKVVEARKLFSEMLSKGLK 424
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T L+ G+ ++G++ +++MV +G P+VVTY +DG CK G A L
Sbjct: 425 PDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANEL 484
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EM P++ T LI+G V NI QA +L +EM PD Y ++ + +
Sbjct: 485 LHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A EL+ M +K + VT++ + G S LE +L M++ +P T
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
LMK +C+ + + ++ + +G P + ++L+ G C +EA+ K+M+
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV 664
Query: 450 VRRRQVSEASYRML 463
+ ++ ASY L
Sbjct: 665 EKGFSLTAASYNSL 678
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 162/347 (46%), Gaps = 5/347 (1%)
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
P F+ +L +A +L + + L+++ S ++ L+R+S S++ AF
Sbjct: 181 PLVFDVFFQVLVEAGLLLEAGKLFDKLL-NYGVLVSVDSCNLFLARLS--NSFDGIRTAF 237
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLG 221
VG+ + + +N++L C ++KEA S+ +++ R P+ + ++++ G
Sbjct: 238 RVFREYSEVGV-CWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDG 296
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ + + + E+ +G +P+ TYN I CK G +A ++ M+ P
Sbjct: 297 YCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPD 356
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
TTLI G G N+ +LFDEM ++ + PD Y +MI L + + A +L
Sbjct: 357 NVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFS 416
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM K + D VTY + G K+ ++ L+++M+E P T L+ C
Sbjct: 417 EMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCG 476
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
VD+ L + ++G P+ + L+ GLC G E+A + ++M
Sbjct: 477 EVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C EMKEA S+ +++ + PN T L+ G + G+V HEM
Sbjct: 430 YTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMS 489
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P+V TYN I+G CK G A++L EEM+ P T TT++ + +
Sbjct: 490 EKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMA 549
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L M + L+P I +N +++ L L+ M +K I + T++++
Sbjct: 550 KAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLM 609
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ + ++Y M VP T T +L+K C + L ++++GF
Sbjct: 610 KQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFS 669
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ + L+ G R ++EEA + ++M
Sbjct: 670 LTAASYNSLIKGFYKRKKFEEARKLFEEM 698
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/421 (20%), Positives = 162/421 (38%), Gaps = 31/421 (7%)
Query: 27 TTQSSEIERITRII-NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
T + E E++ R++ N FPD ++ TL+ ++ +S V +LF
Sbjct: 335 TGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVS------VEYKLFDE------ 382
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
++ P + +H L + +A +L S + + P +T ++
Sbjct: 383 --------MKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTAL- 433
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I + E EAF + + G+ + L+ C E+ A + +
Sbjct: 434 -----IDGYCKAGEMKEAFSLHNQMVEKGLTP-NVVTYTALVDGLCKCGEVDIANELLHE 487
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + PN T N L+ G + G++ EM L GF P +TY +D YCK G
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGE 547
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A L M P++ T L++G + + +L M + + P+ +N+
Sbjct: 548 MAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNS 607
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ ++ A +E+ M + + D TY+ + G K+ ++ L+ M+E
Sbjct: 608 LMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKG 667
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F + L+K F + + L+ + GF D+ V G WE
Sbjct: 668 FSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEGNWENTL 727
Query: 443 E 443
E
Sbjct: 728 E 728
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 131/310 (42%), Gaps = 45/310 (14%)
Query: 161 AFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+FDR + + +G+ F+V Q + EA +F KLL+ + + N+
Sbjct: 162 SFDRFTERLIYTYKDWGAHPLVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNL 221
Query: 218 LLLGFKES--GDVTAMEMF--YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
L S G TA +F Y E+ G + V+YNI + C+ G +A L +M
Sbjct: 222 FLARLSNSFDGIRTAFRVFREYSEV---GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQM 278
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E +P + + + ++ G V + + +L +E+ ++ LKP+ YN++IS L + +
Sbjct: 279 EFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRV 338
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A +++ M+ +RI DNV Y T+ G KS + KL+D M K VP T +
Sbjct: 339 VEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSM 398
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ GLC G+ EA + +ML +
Sbjct: 399 -----------------------------------IHGLCQAGKVVEARKLFSEMLSKGL 423
Query: 454 QVSEASYRML 463
+ E +Y L
Sbjct: 424 KPDEVTYTAL 433
>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
Length = 1024
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +M+EA + +++ R P+ T +LG+ ++G +T ++ EM+
Sbjct: 511 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
G P+ Y + I+G+ K G +A+ +F + + LP +QT + IHG L++N
Sbjct: 571 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHG--LLKNGR 628
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++F E+ ++ L PD+ Y+++IS + ++ A EL DEM K I + Y+
Sbjct: 629 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 688
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL KS ++ KL+D M E P + T ++ +C + V +L+ + +G
Sbjct: 689 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
PH + LV G C G E+A ++ML + + + ++ Y E +
Sbjct: 749 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 808
Query: 478 DLDRMI 483
MI
Sbjct: 809 LFQEMI 814
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 117/478 (24%), Positives = 202/478 (42%), Gaps = 36/478 (7%)
Query: 22 LLFSTTTQSSEIERITRIINDHPF-PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAH 80
L +S T + +E + + DH P+ PL+ L+ G A
Sbjct: 551 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN-----------------GHFKAG- 592
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLT 138
N ++AL F+ L P +H L + +A ++ S ++ P + T
Sbjct: 593 -NLMEALSIFR-RLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFT 650
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
S+ IS F E +AF+ + GI +N L+ C +++ AR
Sbjct: 651 YSSL------ISGFCKQGEVEKAFELHDEMCLKGIAP-NIFIYNALVDGLCKSGDIQRAR 703
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+F + + P++ T + ++ G+ +S +V +HEM +G +P YN + G
Sbjct: 704 KLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGC 763
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK+G AM LF EM + +L + TLI G I +A QLF EM + + PD
Sbjct: 764 CKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDH 822
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y +I + + A L EM+E+ + D VTY ++ +G K V L+++
Sbjct: 823 VTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEK 882
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M+ P T +++ C + L ++ +G G DLL+T LC R
Sbjct: 883 MVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKRED 942
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
EA + +M + S A+ L R +A K+++ R+ + ++++ L P T
Sbjct: 943 LTEASKLLDEMGELGLKPSLAACNTLVRSFHEAG---KMDEATRVFEGVKSLGLVPDT 997
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 121/280 (43%), Gaps = 21/280 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C K M EA+ F ++ + P+ + L+ GF GD+ + MV
Sbjct: 301 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 360
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +++TYN+ I G CK G A + + M + C P+ +T LI G N+
Sbjct: 361 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMG 420
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM KRNL P +Y AMI+ L C+DL+ A +L+++M + + V Y +
Sbjct: 421 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILI 480
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG-------Y 412
+E +L D M P FC N + L+ G Y
Sbjct: 481 MAYASEGRIEEARRLLDGMSCSGVAP---------DIFCYNAIISC-LSKAGKMEEASTY 530
Query: 413 LID---RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L++ RG P + G G+ EA + +ML
Sbjct: 531 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 570
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 125/297 (42%), Gaps = 7/297 (2%)
Query: 162 FDRMER--EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
F +ME+ EI G+ G S F +L++ +C + M A + ++ R P+ +
Sbjct: 381 FGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 440
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
++ G D++ +M G +P+VV Y+I I Y +G +A RL + M
Sbjct: 441 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMS 500
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P + +I + +A E+ R LKPD + A I + +
Sbjct: 501 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 560
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A + DEM + + +N Y + G K+ L ++ R+ +P +T +
Sbjct: 561 EAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFI 620
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
N RV L ++ L ++G P L++G C +G E+AFE +M ++
Sbjct: 621 HGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLK 677
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 103/220 (46%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ ++GD+ + EM +G P+ Y++ I+G C+ G +A+ L M
Sbjct: 230 TYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSM 289
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+P+ T T + G + +++A+ F+EM K LKPD A +A+I +R D+
Sbjct: 290 GEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDI 349
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ + + D M I + +TY+ + GL K +E ++ M+ P +RT +L
Sbjct: 350 DEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLL 409
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
++ +C + L L + R P + ++ GLC
Sbjct: 410 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLC 449
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 135/309 (43%), Gaps = 4/309 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S M+ K ++ E F M + G++ S +N L+ C + +M++A ++
Sbjct: 720 TYSTMIDGYCKSENVAEAFSLFHEMPSK---GVQPH-SFVYNALVHGCCKEGDMEKAMNL 775
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F ++L + + N L+ G+ +S + + EM+ + P VTY ID +CK
Sbjct: 776 FREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 835
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A LF+EM+ + T T+L++G + + LF++M + +KPD Y
Sbjct: 836 GKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTY 895
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+I + + +L A +L DE+ K + + + L K L KL D M E
Sbjct: 896 GLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGE 955
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P L++ F ++D ++ + G P L LV G + E+
Sbjct: 956 LGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSED 1015
Query: 441 AFECSKQML 449
A KQ++
Sbjct: 1016 ARNLIKQLV 1024
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 77/376 (20%), Positives = 143/376 (38%), Gaps = 41/376 (10%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
+P F+ + RM D+A + V + L++L + +L + K +E
Sbjct: 157 SPVVFDILIDSYKRMGMLDEAANVF-FVAKNDSILISLIRCNSLLKDLLKCG----MMEL 211
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
F ++ + F + L+ A C +++ A+ V +++ + PN ++++
Sbjct: 212 FWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIE 271
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G + GD+ M +G P+ TY I G C+ +A FEEM++ P
Sbjct: 272 GMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKP 331
Query: 281 -----------------------------------SLQTITTLIHGAGLVRNIHQARQLF 305
+L T LIHG + +A ++
Sbjct: 332 DYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEIL 391
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
M KP+ + +I R ++ A+EL+DEME++ + V+Y M GL
Sbjct: 392 KGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHC 451
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L KL ++M P +L+ + R++ L + G P
Sbjct: 452 KDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCY 511
Query: 426 DLLVTGLCSRGRWEEA 441
+ +++ L G+ EEA
Sbjct: 512 NAIISCLSKAGKMEEA 527
>gi|125524449|gb|EAY72563.1| hypothetical protein OsI_00429 [Oryza sativa Indica Group]
Length = 535
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 174/382 (45%), Gaps = 10/382 (2%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-Q 130
VL L SN AL FFK+ P + A+ + L IL RM+ +L +
Sbjct: 115 VLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPM 174
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
+ S++T + +++L+R + +E ++ F + + F + F +LL + C
Sbjct: 175 ESRQSVITNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGF----ELDLVGFQILLMSLCR 230
Query: 191 QKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
K ++EA ++F++ F P K+ NI+L G+ G + + ++E++ +P + TY
Sbjct: 231 YKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPDLFTY 290
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
I+ K G A++LF M P + +I + I +A ++F EM
Sbjct: 291 GTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFGEMND 350
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R + D+ YN +I + + EL+D+ME K + +N+TY + L + +
Sbjct: 351 RGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS---YILKTTEKPKD 407
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL-WGYLIDRGFCPHGHALDLLV 429
V L RM + + T +++ + V++ + G+ L W + G P + ++V
Sbjct: 408 VISLMQRMEKSGCRLDSDTYNLILNLY-VSWDYEKGVQLVWDEMERNGSGPDQRSFTIMV 466
Query: 430 TGLCSRGRWEEAFECSKQMLVR 451
GL S G+ +EA + M R
Sbjct: 467 HGLHSHGKLDEALHYYRTMESR 488
>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
and contains a RepB PF|01051 protein and multiple PPR
PF|01535 repeats [Arabidopsis thaliana]
Length = 613
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 167/375 (44%), Gaps = 14/375 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M FD L +Q S L S +I+++ + L
Sbjct: 62 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALA 120
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
+M K G E + LL +C K + EA ++ ++ + + PN T
Sbjct: 121 VLGKM--------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 172
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + MV RG +P + TY ++G CK+G A+ L ++ME+
Sbjct: 173 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 232
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ TT+I +N++ A LF EM + ++P++ YN++I L +
Sbjct: 233 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 292
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ +M E++I + VT+ + +K L KLYD MI+ P T L+
Sbjct: 293 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 352
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D +++ +I + P+ + L+ G C R EE E ++M R
Sbjct: 353 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 412
Query: 456 SEASYRMLQRYLVQA 470
+ +Y L + L QA
Sbjct: 413 NTVTYNTLIQGLFQA 427
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ ++ + +++ + L F M+ + GIR +N L++ C +A +
Sbjct: 243 TTIIDALCNYKNVNDALNLFTEMDNK---GIRP-NVVTYNSLIRCLCNYGRWSDASRLLS 298
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R PN T + L+ F + G + E Y EM+ R P + TY+ I+G+C
Sbjct: 299 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 358
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A +FE M C P++ T TLI G + + + +LF EM +R L + YN
Sbjct: 359 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 418
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L + D + A ++ +M + D +TY + GL K LE +++ + +
Sbjct: 419 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 478
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K P T ++++ C +V+ G +L+ L +G P+ +++G C +G EEA
Sbjct: 479 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 538
Query: 442 FECSKQMLVRRRQVSEASYRMLQR 465
++M + +Y L R
Sbjct: 539 DALFREMKEDGTLPNSGTYNTLIR 562
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC K ++E +F ++ R N T N L+ G ++GD + + +MV
Sbjct: 382 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 441
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++TY+I +DG CK G A+ +FE +++ P + T +I G +
Sbjct: 442 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 501
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF + + +KP++ Y MIS R A L EM+E ++ TY+T+
Sbjct: 502 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 561
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
++ +L M FV T+ M++
Sbjct: 562 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVI 596
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFD-----RMEREIFVGIRKFGSEEFNVLLQAF 188
P ++T SI+L + K+ E+ L F+ +ME +I+ +N++++
Sbjct: 447 PDIITY---SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT---------YNIMIEGM 494
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++++ +F L L PN ++ GF G + + EM G P+
Sbjct: 495 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 554
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
TYN I + G + L +EM + TI+ +I+
Sbjct: 555 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597
>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 149/306 (48%), Gaps = 5/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +M+EA + +++ R P+ T +LG+ ++G +T ++ EM+
Sbjct: 223 YNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
G P+ Y + I+G+ K G +A+ +F + + LP +QT + IHG L++N
Sbjct: 283 DHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHG--LLKNGR 340
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++F E+ ++ L PD+ Y+++IS + ++ A EL DEM K I + Y+
Sbjct: 341 VQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNA 400
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL KS ++ KL+D M E P + T ++ +C + V +L+ + +G
Sbjct: 401 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 460
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
PH + LV G C G E+A ++ML + + + ++ Y E +
Sbjct: 461 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQ 520
Query: 478 DLDRMI 483
MI
Sbjct: 521 LFQEMI 526
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 123/280 (43%), Gaps = 21/280 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C K M EA+ F ++ + P+ + L+ GF GD+ + MV
Sbjct: 13 YTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMV 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +++TYN+ I G CK G A + + M + C P+ +T LI G N+
Sbjct: 73 SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMG 132
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM KRNL P +Y AMI+ L C+DL+ A +L+++M + + V Y T+
Sbjct: 133 RALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLI 192
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG-------Y 412
G +E +L D M P FC N + L+ G Y
Sbjct: 193 MGYASEGRIEEARRLLDGMSCSGVAP---------DIFCYNAIISC-LSKAGKMEEASTY 242
Query: 413 LID---RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L++ RG P + G G+ EA + +ML
Sbjct: 243 LLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEML 282
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 148/333 (44%), Gaps = 23/333 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ FC Q E+++A + ++ L APN N L+ G +SGD+ + M
Sbjct: 363 YSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMP 422
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P VTY+ IDGYCK +A LF EM P L+HG ++
Sbjct: 423 EKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDME 482
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM ++ + ++N +I + + A +L EM K+I D+VTY T+
Sbjct: 483 KAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVI 541
Query: 360 -----FGLMKSSGL------------EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
G M+ + L + V L+++M+ P T +++ C
Sbjct: 542 DWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDN 601
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+ L ++ +G G DLL+T LC R EA + +M + S A+
Sbjct: 602 LVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACST 661
Query: 463 LQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
L R +A K+++ R+ + ++++ L P T
Sbjct: 662 LVRSFHEAG---KMDEATRVFEGVKSLGLVPDT 691
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 132/308 (42%), Gaps = 38/308 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+NVL+ C +M++A + +++ PN++T +L+ G+ +E A+E+ EM
Sbjct: 83 YNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELL-DEM 141
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
R PS V+Y I+G C A +L E+M P++ +TLI G I
Sbjct: 142 EKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRI 201
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+AR+L D M + PDI YNA+IS L + + A + E++ + + D VT+
Sbjct: 202 EEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAF 261
Query: 359 FFGLMKSSGLEGVCKLYDRM---------------IEGKF-------------------- 383
G K+ + K +D M I G F
Sbjct: 262 ILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGV 321
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P +T + N RV L ++ L ++G P L++G C +G E+AFE
Sbjct: 322 LPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFE 381
Query: 444 CSKQMLVR 451
+M ++
Sbjct: 382 LHDEMCLK 389
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 97/234 (41%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T I+ G + + ++ + EM G +P + IDG+ ++G + +
Sbjct: 6 LVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVL 65
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
R+ + M +L T LIHG + +A ++ M KP+ + +I
Sbjct: 66 RIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGY 125
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R ++ A+EL+DEME++ + V+Y M GL L KL ++M P
Sbjct: 126 CREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNV 185
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ + R++ L + G P + +++ L G+ EEA
Sbjct: 186 VVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 128/311 (41%), Gaps = 26/311 (8%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S M+ K ++ E F M + G++ S +N L+ C + +M++A ++
Sbjct: 432 TYSTMIDGYCKSENVAEAFSLFHEMPSK---GVQPH-SFVYNALVHGCCKEGDMEKAMNL 487
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F ++L + + N L+ G+ +S + + EM+ + P VTY ID +CK
Sbjct: 488 FREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKA 547
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIG 318
G +A LF+EM+ RN + LF++M + +KPD
Sbjct: 548 GKMEEANLLFKEMQE--------------------RNLIVDTVFALFEKMVAKGVKPDEV 587
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + + +L A +L DE+ K + + + L K L KL D M
Sbjct: 588 TYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEM 647
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
E P L++ F ++D ++ + G P L LV G +
Sbjct: 648 GELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDS 707
Query: 439 EEAFECSKQML 449
E+A KQ++
Sbjct: 708 EDARNLIKQLV 718
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 79/205 (38%), Gaps = 39/205 (19%)
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+P+ T T + G + +++A+ F+EM K LKPD A +A+I +R D++ +
Sbjct: 7 VPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLR 66
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ D M I + +TY+ + GL K +E ++ MI P +RT
Sbjct: 67 IKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT--------- 117
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
FC LL+ G C A E +M R S
Sbjct: 118 -------------------FC-------LLIEGYCREHNMGRALELLDEMEKRNLVPSAV 151
Query: 459 SYRMLQRYLVQAN----ANEKLEDL 479
SY + L AN+ LE +
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKM 176
>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At2g02150-like [Cucumis
sativus]
Length = 822
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 110/411 (26%), Positives = 178/411 (43%), Gaps = 27/411 (6%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FFK+ F T +++ +H++ R R + A + + V IM
Sbjct: 87 ALKFFKWAGSQVGFRHTTESYCIIVHLVFRARMYTDAHDTVKEV--------------IM 132
Query: 146 LSRISKFQSYEETLEAFDRM--EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
SR+ FD + R I V GS F+VL F ++EA F +
Sbjct: 133 NSRMDMGFP---VCNIFDMLWSTRNICVS----GSGVFDVLFSVFVELGLLEEANECFSR 185
Query: 204 LLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + R P ++ N LL +SG+ + F+++M+ G PSV TYN+ ID CK+G
Sbjct: 186 MRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGD 245
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
++ RLF +M + P + T +LI G G V ++ + LF+EM PDI YN
Sbjct: 246 LENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNG 305
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + + A E EM+ + + VTY T+ K ++G KL M
Sbjct: 306 LINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTG 365
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T L+ C + L ++ G + L+ GLC GR EA
Sbjct: 366 LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAE 425
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
E + ML ++ Y L ++A E++ED +++K + P
Sbjct: 426 EVFRSMLKDGISPNQQVYTALVHGYIKA---ERMEDAMKILKQMTECNIKP 473
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 107/216 (49%), Gaps = 1/216 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL-GFKESGDVTAMEMFYHEMV 239
+ ++ C+Q++++E + + ++ SR N ++ ++ + ++G + F+ EM
Sbjct: 478 YGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQ 537
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTY + IDG C+ G A+ F M + P++ T+LI G I
Sbjct: 538 DVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIE 597
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LFDEM R + PDI A+ A+I ++ +L A+ L+ M E I D Y ++
Sbjct: 598 SAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLV 657
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
G + L K ++ MIE +P+ + L++
Sbjct: 658 SGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 149/355 (41%), Gaps = 17/355 (4%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T + ++ KF+ E F M+ G++ ++ L+ AFC +
Sbjct: 298 PDIITYNGL---INCYCKFEKMPRAFEYFSEMKNN---GLKP-NVVTYSTLIDAFCKEGM 350
Query: 194 MKEARSVFVKLL-----SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
M+ A +KLL + PN T L+ ++G++T ++M+ G + ++V
Sbjct: 351 MQGA----IKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIV 406
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY +DG CK G +A +F M + P+ Q T L+HG + A ++ +M
Sbjct: 407 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 466
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ N+KPD+ Y ++I R L +++EM+ + I + V T+ K+
Sbjct: 467 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 526
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ M + T +L+ C V+L ++ + ++ G P+ L
Sbjct: 527 SDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSL 586
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
+ GLC E A + +M R ++ ++ L N E L + RM
Sbjct: 587 IDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRM 641
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 1/165 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ VL+ C ++ A F ++LS PN L+ G + + + + + EM
Sbjct: 548 YCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQ 607
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P + + IDG K G +A+ L M +A L T+L+ G +H
Sbjct: 608 CRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELH 667
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
QAR+ F+EM ++ + P+ ++ + L+ A+EL +EME
Sbjct: 668 QARKFFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIELKNEME 712
>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
Length = 599
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 120/464 (25%), Positives = 192/464 (41%), Gaps = 31/464 (6%)
Query: 36 ITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ 95
I ++I D PD + T++ L + S+ VE +AL F ++
Sbjct: 103 IKKMIEDGHVPDVVTYNTVMDGLCK-----SSRVE--------------EALLLFN-EME 142
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
TP + + L + DQA ++ ++ + S I++ ++K
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW-SYGILIDGLAKAGKL 201
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKT 214
E + F RM + GI + +NV++ C + EA +F + S+ P+ T
Sbjct: 202 NEAYKLFQRM---LDSGITP-SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFT 257
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NIL+ + G + M G P VVTY+ I G C DA L E+M
Sbjct: 258 FNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMV 317
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ C P++ T TLIHG I +AR++ D M PD+ YN ++ R
Sbjct: 318 KRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTE 377
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL+ +M + + + VTY + GL K++ L C ++ +M P T L+
Sbjct: 378 RARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALI 437
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM--LVRR 452
FC +VD GL L+G ++ G P L LC GR A E ++ +R
Sbjct: 438 LGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 497
Query: 453 RQVSEASYRMLQRYLVQANANE-KLEDLDRMIKNLQAVLPPPTR 495
+ YR L++A E L + M++ Q LP P R
Sbjct: 498 EAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQ--LPAPER 539
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 142/310 (45%), Gaps = 2/310 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C +AR +F + R P + T N+++ + G + +M+
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VVTYN +DG CK +A+ LF EMER+ C P+ ++ T+I G I
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA Q+F EM +++ PD +Y +I L + LN A +L M + I VTY+ +
Sbjct: 168 QACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVI 227
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + L+ +L+ M P T +L+ C ++D L + D G
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHV 287
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLED 478
P L++GLCS R ++A + M+ R+ + + + L L +A E E
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 479 LDRMIKNLQA 488
LD M+ + Q+
Sbjct: 348 LDAMVSSGQS 357
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 132/272 (48%), Gaps = 1/272 (0%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
S + +L+ ++ +AR++F KLL S P+ L+ G + +
Sbjct: 10 SWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M RG PS VTYN+ ID CK+G +A L ++M +P + T T++ G
Sbjct: 70 DMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSS 129
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A LF+EM + P+ ++N +I L + ++ A ++ EME K I D+ +Y
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYG 189
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K+ L KL+ RM++ P T +++ C+ + +D L L+ + +
Sbjct: 190 ILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P ++L+ C RG+ +EAF K+M
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKLDEAFRLLKRM 281
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/382 (25%), Positives = 161/382 (42%), Gaps = 12/382 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H TP+ A+ +H L FD A EL + + R PS +T ++M+ K
Sbjct: 36 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY---NVMIDASCK 92
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-- 209
EE + +M + V +N ++ C ++EA +F ++ R
Sbjct: 93 RGMLEEACDLIKKMIEDGHV----PDVVTYNTVMDGLCKSSRVEEALLLFNEM-ERLGCT 147
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN ++ N ++LG + + +HEM + P +Y I IDG K G +A +L
Sbjct: 148 PNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+ M PS T +IHG L + +A +LF M + +P +N +I + +
Sbjct: 208 FQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCK 267
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
L+ A L+ M + D VTY T+ GL + ++ L + M++ + P T
Sbjct: 268 RGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 327
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C R+ + ++ G P + LV G C G+ E A E M+
Sbjct: 328 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 450 VRRRQVSEASYRMLQRYLVQAN 471
R + +Y L L +AN
Sbjct: 388 ARGLAPNVVTYTALVSGLCKAN 409
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 104/223 (46%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R P +Y I IDG K G DA LF+++ PS T+LIHG + +
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+LF +M +R P YN MI + + L A +L+ +M E D VTY+T+
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL KSS +E L++ M P R+ ++ C ++D ++ + + P
Sbjct: 124 GLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPP 183
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ +L+ GL G+ EA++ ++ML S +Y ++
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVV 226
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 58/135 (42%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +RN+ PD +Y +I L + LN A L ++ + V Y ++ GL ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ +L+ M P T +++ C ++ +L +I+ G P +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 428 LVTGLCSRGRWEEAF 442
++ GLC R EEA
Sbjct: 121 VMDGLCKSSRVEEAL 135
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M E+ + D+ +Y + GL K+ L L+ +++ P T L+ C+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
D L+ + RG P ++++ C RG EEA + K+M+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMI 107
>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 445
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/373 (25%), Positives = 170/373 (45%), Gaps = 40/373 (10%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + K + Y + F + E GI ++L+ FC + A SVF +
Sbjct: 67 ILSSLVKNKRYPTVISLFKQFEPN---GITP-DLCTLSILINCFCHLTHITFAFSVFANI 122
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG-- 261
L R + PN T+N L+ G G++ F+ ++V +GF+ V+Y I+G CK G
Sbjct: 123 LKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGET 182
Query: 262 -----------------------------C----FGDAMRLFEEMERVACLPSLQTITTL 288
C GDA L+ EM P++ T TTL
Sbjct: 183 KAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTL 242
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
IHG ++ N+ +A L +EM +N+ PD+ +N +I +L + ++ AM L +EM+ K +
Sbjct: 243 IHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNM 302
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VTY ++ GL K+ LE L +M E P + +L+ C R++
Sbjct: 303 FPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQ 362
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
+ +L+ +G+ + ++++ GLC G + + + +M + + +++ + L+
Sbjct: 363 FFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALL 422
Query: 469 QANANEKLEDLDR 481
+ + N+K E R
Sbjct: 423 EKDENDKAEKFLR 435
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 102/236 (43%), Gaps = 2/236 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ M+L P +N + K + + LF++ E P L T++ LI+
Sbjct: 49 FNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCH 108
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +I A +F + KR P+ N +I L C ++ A+ D++ + D V+
Sbjct: 109 LTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVS 168
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y T+ GL K+ + V +L R +EG V P ++ C N + +L+ +
Sbjct: 169 YGTLINGLCKAGETKAVARLL-RKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEM 227
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
I +G P+ L+ G C G +EAF +M ++ ++ +L L +
Sbjct: 228 IVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAK 283
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 27/127 (21%), Positives = 57/127 (44%)
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ + L+K+ V L+ + P T+ +L+ FC + +++ ++
Sbjct: 64 FNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHLTHITFAFSVFANIL 123
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
RG+ P+ L+ L+ GLC G + A +++ + Q+ + SY L L +A +
Sbjct: 124 KRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETK 183
Query: 475 KLEDLDR 481
+ L R
Sbjct: 184 AVARLLR 190
>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
Length = 648
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI++ + K S+++ L F+ ME + GI K ++ L+ C + + +
Sbjct: 278 SIVIDSLCKDGSFDDALSLFNEMEMK---GI-KADVVTYSSLIGGLCNDGKWDDGAKMLR 333
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ R P+ T + L+ F + G + + Y+EM+ RG P +TYN IDG+CK+
Sbjct: 334 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 393
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
C +A ++F+ M C P + T + LI+ + + +LF E+ + L P+ YN
Sbjct: 394 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 453
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + LNAA EL EM + + VTY + GL + L +++++M +
Sbjct: 454 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 513
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +++ C +VD +L+ L D+G P ++++ GLC +G EA
Sbjct: 514 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 573
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 110/218 (50%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ ++C K + + +F ++ S+ PN T N L+LGF +SG + A + + EMV
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG PSVVTY I +DG C G A+ +FE+M++ + +IHG +
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF + + +KPD+ YN MI L + L+ A L +M+E D+ TY+ +
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ SGL +L + M F + T+ M++
Sbjct: 597 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 4/307 (1%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+++ +C +K++ A SV + + P+ T + L+ GF G V+ MV
Sbjct: 139 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 198
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
RP +VT + I+G C KG +A+ L + M P T +++ N A
Sbjct: 199 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 258
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
LF +M +RN+K + Y+ +I SL + + A+ L +EME K I D VTY ++ G
Sbjct: 259 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 318
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + K+ MI +P T L+ F ++ L+ +I RG P
Sbjct: 319 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 378
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ L+ G C EA + M+ + + +Y +L +A ++++D R
Sbjct: 379 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA---KRVDDGMR 435
Query: 482 MIKNLQA 488
+ + + +
Sbjct: 436 LFREISS 442
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LFE M + LP+ L + M ++ D+ MI
Sbjct: 82 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 141
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R + L A ++ + D +T+ T+ G + L DRM+E K
Sbjct: 142 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 201
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P TV L+ C+ RV L L +++ GF P ++ LC G A +
Sbjct: 202 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 261
Query: 445 SKQMLVRRRQVSEASYRML 463
++M R + S Y ++
Sbjct: 262 FRKMEERNIKASVVQYSIV 280
>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
Length = 757
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 185/401 (46%), Gaps = 39/401 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
+ F + + P+F P+ F++ LH L + FD +++ + + S++ S+ +
Sbjct: 72 VIHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEM-KISLSVIDNDSLLVF 130
Query: 146 LSRISKFQSYEETLEAFDRMEREIFV---------------------------------G 172
+ + F Y E L+ D ME E V G
Sbjct: 131 IESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRG 190
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTA 230
IR S FN+L++A C +++ A + ++ + F P+ KT ++ GF E G++
Sbjct: 191 IRPDVS-TFNILIKALCRAHQIRPA-ILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDG 248
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME-RVACLPSLQTITTLI 289
+MV G + VT N+ ++G+CK+G +A+R EEM R P T L+
Sbjct: 249 AMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLV 308
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G ++ A ++ D M + PDI YN++IS L + +++ A++++++M E+
Sbjct: 309 NGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ VTY+T+ L K + +E KL + +P T L++ C++ + + L
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+ + +G P ++L+ LC RG+ +EA K+M V
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEV 469
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 94/392 (23%), Positives = 173/392 (44%), Gaps = 12/392 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
+AL F + F P F ++ L++ + A E+M + R P + T S+
Sbjct: 283 EALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSL 342
Query: 143 SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+S + K +E ++ ++M ER+ + +N ++ C + +++EA +
Sbjct: 343 ---ISGLCKLGEVDEAVKVLNQMIERDC-----SPNTVTYNTIISTLCKENQVEEATKLA 394
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ L + P+ T N L+ G S + T Y EM +G P TYN+ ID C +
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A+ L +EME C ++ T TLI G + I +A ++FD+M + + + Y
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N +I L + + A +LMD+M + + D TY+++ K+ ++ + M
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMAS 574
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T L+ C RV+ L + +G HA + ++ L R R +E
Sbjct: 575 DGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKE 634
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
A ++M+ + +Y+++ R L Q
Sbjct: 635 AVRLFREMIEKAEAPDAVTYKIVFRGLCQGGG 666
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 136/297 (45%), Gaps = 6/297 (2%)
Query: 187 AFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLR-G 242
FC + ++EA ++ R F P+ T N+L+ G ++G V A+E+ +M+LR G
Sbjct: 274 GFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVM--DMMLREG 331
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P + TYN I G CK G +A+++ +M C P+ T T+I + +A
Sbjct: 332 FDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEAT 391
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L + + + PD+ YN++I L R+ AMEL EM+ K D TY+ + L
Sbjct: 392 KLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSL 451
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
L+ L M T L+ FC N R+ ++ + +G +
Sbjct: 452 CFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNS 511
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ L+ GLC R EEA + QM++ + + +Y L Y +A +K D+
Sbjct: 512 VTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADI 568
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 99/217 (45%), Gaps = 6/217 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K + EA +F ++ L + N+ T N L+ G +S V +M+
Sbjct: 479 YNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMI 538
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G RP TYN + +CK G A + + M C P + T TLI G +
Sbjct: 539 MEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVE 598
Query: 300 QARQLFD--EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A +L +M NL P AYN +I +L R + A+ L EM EK D VTY
Sbjct: 599 AATKLLRTIQMKGINLTPH--AYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKI 656
Query: 358 MFFGLMKSSGLEG-VCKLYDRMIEGKFVPKTRTVVML 393
+F GL + G G M+E +VP+ + ML
Sbjct: 657 VFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYML 693
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/283 (22%), Positives = 126/283 (44%), Gaps = 9/283 (3%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN---IRIDGYCKKGCFG 264
F P++ +L ++G+ AM+ EM + SV+ + + I+ Y G +
Sbjct: 85 FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKIS---LSVIDNDSLLVFIESYASFGLYN 141
Query: 265 DAMRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+ ++ + ME + + L++ + M R ++PD+ +N +
Sbjct: 142 EILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNIL 201
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I +L R + A+ LM+EME+ + D T+ T+ G ++ L+G ++ ++M+E
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYL-IDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
V TV +L+ FC R++ L + + GF P + ++LV GL G + A
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHAL 321
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMIK 484
E ML +Y L L + +E ++ L++MI+
Sbjct: 322 EVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 100/266 (37%), Gaps = 49/266 (18%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + ++ K + E E FD+ME + G+ + S +N L+ C + ++EA +
Sbjct: 478 TYNTLIDGFCKNKRIAEAEEIFDQMELQ---GVSR-NSVTYNTLIDGLCKSERVEEASQL 533
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++ P+ T N LL F ++GD+ M G P +VTY I G CK
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593
Query: 260 KGCF-----------------------------------GDAMRLFEEMERVACLPSLQT 284
G +A+RLF EM A P T
Sbjct: 594 AGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVT 653
Query: 285 ITT----LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
L G G I +A EM +R P+ ++ + L + ++L+
Sbjct: 654 YKIVFRGLCQGGG---PIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLI 710
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSS 366
D + EK DN TM G +K S
Sbjct: 711 DMVMEKAKFSDNEV--TMIRGFLKIS 734
>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 618
Score = 129 bits (324), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 99/412 (24%), Positives = 188/412 (45%), Gaps = 32/412 (7%)
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLK 140
++A FF ++ H P +F + L LA++ ++ Q + L + ++ P L TL
Sbjct: 72 AIQAFHFFDLMMRS-HPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTL- 129
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
SI+ + + E L A + R ++ + L++ C + + EA +
Sbjct: 130 --SILANCLCNVNRVSEALAAMAGILRRGYIP----NVVTYTTLIKGLCMEHRISEATRL 183
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG------FRPSVVTYNIR 253
F+++ PN T L+ G ++G+V + EM+ +P V+TY+I
Sbjct: 184 FLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSII 243
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
IDG CK G +A LFEEM+ +P + + +TLIHG Q++ LFDEM + +
Sbjct: 244 IDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGV 303
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ ++ +I +L + + A +L++ M ++ I + +TY+++ G L +
Sbjct: 304 QPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARE 363
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L+ M P + L+ +C ++V +NL+ ++ G P+ L+ GL
Sbjct: 364 LFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+G+ +A + + +++ Y V AN+ LD + KN
Sbjct: 424 QKGKVGDA---------------KKLFGVMKTYGVSANSQIYGIFLDGLCKN 460
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+VL+ C + ++ EA+ + ++ R PN T N L+ GF GD+ + + M
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP 369
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P ++Y I+GYCK +AM L+ EM +V P++ T TL+ G +
Sbjct: 370 SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVG 429
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF M + + Y + L + L AMEL +E++ + Y +
Sbjct: 430 DAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLI 489
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE +L++++ + P T +++ FC +VD L+ + + G
Sbjct: 490 DGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCT 549
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P A + L+ G C + EE + +M+ + + AS ++ L + +K DL
Sbjct: 550 PDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDL 609
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 159/356 (44%), Gaps = 12/356 (3%)
Query: 103 PD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD ++ +H +DQ+ L + Q P ++T + L + K ++
Sbjct: 270 PDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKL 329
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
LE ++R I + + N L+ FC ++ AR +F+ + S+ P+ +
Sbjct: 330 LEVM--IQRGIVPNLITY-----NSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTT 382
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ ++ V Y+EM+ G P+V TY + G +KG GDA +LF M+
Sbjct: 383 LINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYG 442
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ Q + G + +A +LF+E+ N K +I Y+ +I L + L A
Sbjct: 443 VSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAW 502
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL +++ ++ + D VTY+ M G K ++ L+++M E P L+ F
Sbjct: 503 ELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGF 562
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
C +++ + L ++ + P+ + ++V LC ++++ + + V+R
Sbjct: 563 CEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQRH 618
>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g74580-like [Cucumis
sativus]
Length = 877
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 166/347 (47%), Gaps = 14/347 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ F + I L R D+A L+ + + P +++ ++ I F + +
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTL------ICGFCKHSKL 302
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+EA + + + G+ +N ++ FC M+ A + + + F P+ T +
Sbjct: 303 VEAECYLHKMVNSGVEP-NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSS 361
Query: 218 LLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G GD+ AM +FY M +GF+ S++ YN + G K+G A++L ++M
Sbjct: 362 LINGLCNDGDMNRAMAVFYEAME-KGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEH 420
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T +++G + + A + ++ + PDI +N +I + R+++ A
Sbjct: 421 GCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKA 480
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+E++D M I D +TY+T+ GL K+ L+ V + M+E P T +L++
Sbjct: 481 IEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIES 540
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
FC + +V + L+ + RG P L L+ GLCS G ++A+E
Sbjct: 541 FCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYE 587
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/371 (22%), Positives = 158/371 (42%), Gaps = 44/371 (11%)
Query: 111 HILARMRYFD---QAWELMSHVQRTHPSLLTLKSMSIMLSRIS---KFQSYEETLEAF-- 162
H+ A +RY + A ++ + V+ TL++ M+ ++ KF++ E+ L
Sbjct: 9 HVAAVIRYQNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRK 68
Query: 163 ---DRMEREIFVGI-RKFGS-----------------------EEFNVLLQAFCTQKEMK 195
+M +++GI R +G + +N ++
Sbjct: 69 NVDSKMLEGVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFS 128
Query: 196 EARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+A V++++ P+ T I + F +G TA + M +G + V+Y I
Sbjct: 129 QAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVI 188
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G+ K+ C +A LF+EM + P + T LIH N+ ++ +LF ++ KR +
Sbjct: 189 SGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVC 248
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCK 373
P++ +N I L R ++ A L++ + + + D ++Y+T+ G K S L E C
Sbjct: 249 PNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECY 308
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID---RGFCPHGHALDLLVT 430
L+ +M+ P T ++ FC + + N L D +GF P L+
Sbjct: 309 LH-KMVNSGVEPNEFTYNTIINGFC---KAGMMQNADKILRDAMFKGFIPDEFTYSSLIN 364
Query: 431 GLCSRGRWEEA 441
GLC+ G A
Sbjct: 365 GLCNDGDMNRA 375
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 108/263 (41%), Gaps = 2/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A + +++ P+ T N L+ G+ + ++ M+
Sbjct: 429 YNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTML 488
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TYN ++G CK + + F+ M C P++ T LI R +
Sbjct: 489 SHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVS 548
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME-EKRIGHDNVTYHTM 358
+A +LF EM R L PDI +I L +L+ A EL +E E + + ++ M
Sbjct: 549 EAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIM 608
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ KL+ +M P T +++ +C +DL I +G
Sbjct: 609 INAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGL 668
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P ++ LC R EA
Sbjct: 669 VPSFTTCGKVLNCLCVTHRLSEA 691
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/431 (21%), Positives = 169/431 (39%), Gaps = 57/431 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ ++ ++IL YF QA ++ ++ +P + T +I +
Sbjct: 109 PSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYT---HTIRMKSFCITGRPTAA 165
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L + M + G +F + + ++ F + EA +F ++L + P+ T N
Sbjct: 166 LRLLNNMPGQ---GC-EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNK 221
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ + G+V E + +++ RG P++ T+NI I G C+KG +A RL E +
Sbjct: 222 LIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEG 281
Query: 278 CLPSLQTITTLIHG--------------------------------------AGLVRNIH 299
P + + TLI G AG+++N
Sbjct: 282 LTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQN-- 339
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ + + PD Y+++I+ L D+N AM + E EK H + Y+T+
Sbjct: 340 -ADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLV 398
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +L M+E P T +++ C + + I +G
Sbjct: 399 KGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCI 458
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ G C + ++A E ML +Y L L +A L
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA------RKL 512
Query: 480 DRMIKNLQAVL 490
D ++ +A+L
Sbjct: 513 DNVVDTFKAML 523
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 108/252 (42%), Gaps = 13/252 (5%)
Query: 103 PD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F + + R D+A E++ + P ++T ++ L + K + +T
Sbjct: 459 PDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDT 518
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A +E+ I + N+L+++FC +++ EA +F ++ +R P+ T+
Sbjct: 519 FKAM--LEKGCTPNIITY-----NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571
Query: 218 LLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +G++ A E+F F S +NI I+ +C K A +LF +M
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P T +I NI A E + L P +++ L L+ A
Sbjct: 632 DCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEA 691
Query: 337 MELMDEMEEKRI 348
+ +++ M + I
Sbjct: 692 VVIINLMVQNGI 703
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 102/251 (40%), Gaps = 14/251 (5%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV- 129
N L + N KA+E L H TP + L+ L + R D + +
Sbjct: 465 NTLIDGYCKQRNMDKAIEILDTMLSHG-ITPDVITYNTLLNGLCKARKLDNVVDTFKAML 523
Query: 130 -QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQA 187
+ P+++T +I++ K + E +E F M+ R + I + L+
Sbjct: 524 EKGCTPNIITY---NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT-----LICG 575
Query: 188 FCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C+ E+ +A +FV + +F+ + NI++ F +V+ E +H+M P
Sbjct: 576 LCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAP 635
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
TY + ID YCK G A E +PS T +++ + + +A +
Sbjct: 636 DNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVII 695
Query: 306 DEMPKRNLKPD 316
+ M + + P+
Sbjct: 696 NLMVQNGIVPE 706
>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62930, chloroplastic; Flags: Precursor
gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 167/375 (44%), Gaps = 14/375 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M FD L +Q S L S +I+++ + L
Sbjct: 78 PSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISY-DLYSYNILINCFCRRSQLPLALA 136
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
+M K G E + LL +C K + EA ++ ++ + + PN T
Sbjct: 137 VLGKM--------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTF 188
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + MV RG +P + TY ++G CK+G A+ L ++ME+
Sbjct: 189 NTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEK 248
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ TT+I +N++ A LF EM + ++P++ YN++I L +
Sbjct: 249 GKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSD 308
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A L+ +M E++I + VT+ + +K L KLYD MI+ P T L+
Sbjct: 309 ASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D +++ +I + P+ + L+ G C R EE E ++M R
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428
Query: 456 SEASYRMLQRYLVQA 470
+ +Y L + L QA
Sbjct: 429 NTVTYNTLIQGLFQA 443
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 76/300 (25%), Positives = 140/300 (46%), Gaps = 5/300 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ ++ + +++ + L F M+ + GIR +N L++ C +A +
Sbjct: 259 TTIIDALCNYKNVNDALNLFTEMDNK---GIRP-NVVTYNSLIRCLCNYGRWSDASRLLS 314
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R PN T + L+ F + G + E Y EM+ R P + TY+ I+G+C
Sbjct: 315 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A +FE M C P++ T TLI G + + + +LF EM +R L + YN
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYN 434
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L + D + A ++ +M + D +TY + GL K LE +++ + +
Sbjct: 435 TLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKS 494
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K P T ++++ C +V+ G +L+ L +G P+ +++G C +G EEA
Sbjct: 495 KMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 554
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC K ++E +F ++ R N T N L+ G ++GD + + +MV
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++TY+I +DG CK G A+ +FE +++ P + T +I G +
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVE 517
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF + + +KP++ Y MIS R A L EM+E ++ TY+T+
Sbjct: 518 DGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLI 577
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ +L M FV T+ M++
Sbjct: 578 RARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 615
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFD-----RMEREIFVGIRKFGSEEFNVLLQAF 188
P ++T SI+L + K+ E+ L F+ +ME +I+ +N++++
Sbjct: 463 PDIITY---SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYT---------YNIMIEGM 510
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++++ +F L L PN ++ GF G + + EM G P+
Sbjct: 511 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNS 570
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
TYN I + G + L +EM + TI+ +I+
Sbjct: 571 GTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613
>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
Length = 348
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 146/286 (51%), Gaps = 2/286 (0%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
ET A D ++R + + + + +N ++ C K + +A ++ +++S+ +PN T
Sbjct: 57 ETRAALDLLQR-VDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 115
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ GF G + +++++L +P T+NI +DG+CK + +F M +
Sbjct: 116 SALISGFFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMK 175
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P + T +L+ G LV+ ++ A+ +F+ M + + PDI +YN +I+ + + ++
Sbjct: 176 QGIIPDVVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDK 235
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AM L +EM K I + VTY+++ GL KS + +L D+M + P T ++
Sbjct: 236 AMNLFNEMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIID 295
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+VD + L D+G P + +L+ GLC GR ++A
Sbjct: 296 ALFKTHQVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 135/267 (50%), Gaps = 10/267 (3%)
Query: 106 FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ ++ + + ++ + A++L S + + P+++T ++ IS F + +A D
Sbjct: 80 YNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSAL------ISGFFVVGKLKDAID 133
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ I I+ G FN+L+ FC ++MKE ++VF ++ + P+ T N L+ G+
Sbjct: 134 LFNKIILENIKPDG-YTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY 192
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ +V + ++ M G P + +YNI I+G+CK AM LF EM +P++
Sbjct: 193 RLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 252
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +LI G I A QL D+M R + P+I YN++I +L + ++ A+ L+ +
Sbjct: 253 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 312
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+++ I TY + GL K L+
Sbjct: 313 FKDQGIQPSMYTYTILIDGLCKGGRLK 339
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N L++ C + ++ +A KL++ F + + L+ G + G+ A +
Sbjct: 10 LNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVD 69
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + + V YN I G CK DA L+ EM P++ T + LI G +V +
Sbjct: 70 GKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLK 129
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF+++ N+KPD +N ++ + R + + M ++ I D VTY+++
Sbjct: 130 DAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLV 189
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + +++ M +G P R+ +L+ FC +VD +NL+ + +
Sbjct: 190 DGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNII 249
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ + L+ GL GR A + QM
Sbjct: 250 PNVVTYNSLIDGLSKSGRISYALQLVDQM 278
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 75/162 (46%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T+ TLI G L IHQA D++ D +Y +I L + + AA++L
Sbjct: 5 PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ ++ K + + V Y+T+ +G+ K + LY M+ P T L+ F V
Sbjct: 65 LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ ++L+ +I P G+ ++LV G C + +E
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEG 166
>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
Length = 724
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 95/375 (25%), Positives = 165/375 (44%), Gaps = 9/375 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTP + +H L + D+A L+S V P+++ ++ R + E T
Sbjct: 311 FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVP--GPNVVHFNTLVNGFVRNGRLN--EAT 366
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
+D+M +V F+ L+ C + A + + ++ PN T I
Sbjct: 367 AFVYDKMINNGYVP----DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTI 422
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF + G + + EM+ +GF + V YN I CK G +A+ +F EM
Sbjct: 423 LIDGFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKG 482
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T +LI G V + A L+ +M + + +N +I + +R ++ A+
Sbjct: 483 CKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEAL 542
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+++M + D +TY+ + L K+ +E L++ MI P T +L+ F
Sbjct: 543 KLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGF 602
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C +V L +I RGF P + L+ GLC RGR +EA +++ Q
Sbjct: 603 CTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDS 662
Query: 458 ASYRMLQRYLVQANA 472
+Y L +L + A
Sbjct: 663 ITYNTLICWLCREGA 677
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 119/259 (45%), Gaps = 15/259 (5%)
Query: 145 MLSRISKFQSYEETLEAFDRMER-----EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
++S + K E L+ F M +IF FN L+ C EM++A +
Sbjct: 458 LISALCKHGKIHEALDMFGEMSSKGCKPDIFT---------FNSLIFGLCRVDEMEDALA 508
Query: 200 VFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ + L N+ T N L+ F G++ ++M+ RG +TYN I C
Sbjct: 509 LYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALC 568
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G + LFEEM R PS+ T LI+G +H A + +M R PDI
Sbjct: 569 KTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIV 628
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN++I+ L + + A+ L ++++ + I D++TY+T+ L + + C L R
Sbjct: 629 TYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLYRG 688
Query: 379 IEGKFVPKTRTVVMLMKFF 397
+E FVP T +L+ F
Sbjct: 689 VENGFVPNDVTWNILVYNF 707
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 111/238 (46%), Gaps = 8/238 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P + T S+ L R+ + E+ L + M E + S FN L+ AF + E
Sbjct: 485 PDIFTFNSLIFGLCRVDEM---EDALALYRDMVLEGVIA----NSVTFNTLIHAFLRRGE 537
Query: 194 MKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
++EA + +L R P ++ T N L+ ++G V + EM+ +G PS++T NI
Sbjct: 538 IQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNI 597
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+G+C G +A+ +M P + T +LI+G I +A LF+++
Sbjct: 598 LINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEG 657
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
++PD YN +I L R + A L+ E ++VT++ + + K S EG
Sbjct: 658 IQPDSITYNTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEG 715
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 155/378 (41%), Gaps = 11/378 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
+P F + L + D A L+ + + H + ++ +SK +E L
Sbjct: 207 SPNDYTFGLVMKALCMVNEVDNACLLLRDMTK-HGCVPNSMIYQTLIDALSKRDRVDEAL 265
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFC-TQKEMKEARSVFVKLLSRFAPNNKTMNIL 218
++ E+F+ FN ++ FC + ++ A+ V +L F PN+ T L
Sbjct: 266 ----KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYL 321
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR-LFEEMERVA 277
+ G ++ + + ++ P+VV +N ++G+ + G +A ++++M
Sbjct: 322 MHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNG 377
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T +TL++G A +L ++M + KP++ Y +I + L A
Sbjct: 378 YVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAG 437
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ EM K + V Y+ + L K + ++ M P T L+
Sbjct: 438 LILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGL 497
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C ++ L L+ ++ G + + L+ RG +EA + ML R + E
Sbjct: 498 CRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDE 557
Query: 458 ASYRMLQRYLVQANANEK 475
+Y L + L + A EK
Sbjct: 558 ITYNGLIKALCKTGAVEK 575
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 125/329 (37%), Gaps = 56/329 (17%)
Query: 190 TQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG----- 242
QK + SV+ L+ + A K ++ LLL KE G V +F M G
Sbjct: 96 AQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILIMKYYGRAGLP 155
Query: 243 ---------------FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
PS +YN+ +D C A +F +M P+ T
Sbjct: 156 GQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGL 215
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ +V + A L +M K P+ Y +I +L + ++ A++L++EM
Sbjct: 216 VMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMG 275
Query: 348 IGHDNVTYHTMFFGLMK-SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D T++T+ +G + + LEG KL DRMI F P T LM C R+D
Sbjct: 276 CPPDVNTFNTVIYGFCRLNRVLEGA-KLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA 334
Query: 407 ---------------------------LN-----LWGYLIDRGFCPHGHALDLLVTGLCS 434
LN ++ +I+ G+ P LV GLC
Sbjct: 335 QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCK 394
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
+G + A E M + + + +Y +L
Sbjct: 395 KGLFGSALELVNDMDAKGCKPNLNTYTIL 423
Score = 42.0 bits (97), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 95/245 (38%), Gaps = 5/245 (2%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--ERVACLPSLQTIT 286
T+ME+F +G+ S Y + ID F RL +M E + SL +
Sbjct: 86 TSMEIFKWAGAQKGYCHSFSVYYLLIDKLGAAAGFKVIDRLLLQMKEEGIVFRESLFILI 145
Query: 287 TLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+G AGL R L D +P +YN ++ L+ + A + +M
Sbjct: 146 MKYYGRAGLPG--QATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLS 203
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K + ++ T+ + L + ++ C L M + VP + L+ RVD
Sbjct: 204 KGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDE 263
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L L + G P + + ++ G C R E + +M+++ ++ +Y L
Sbjct: 264 ALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMH 323
Query: 466 YLVQA 470
L +
Sbjct: 324 GLCKT 328
>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g39710-like [Glycine max]
Length = 757
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 148/305 (48%), Gaps = 5/305 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC + + + + +++ + +PN T L+ ++G+++ + +M
Sbjct: 315 YNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMR 374
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+RG RP+ TY IDG+C+KG +A ++ EM PS+ T L+HG + +
Sbjct: 375 VRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQ 434
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + M +R L PD+ +Y+ +I+ R R+L A ++ +EM EK + D VTY ++
Sbjct: 435 EAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLI 494
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL L L+ M+ P T L+ +CV+ + L L ++ RGF
Sbjct: 495 QGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFL 554
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +L+ GL + R + A K++L++ + L++ +N + + +
Sbjct: 555 PDNVTYSVLINGLNKKARTKVA----KRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSV 610
Query: 480 DRMIK 484
+ ++K
Sbjct: 611 EGLVK 615
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/452 (23%), Positives = 199/452 (44%), Gaps = 19/452 (4%)
Query: 45 FPDQPLHPTLLQHLPQT-----TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHF 99
PD P +L +HL T +P SS+ V +++ + + KAL +H F
Sbjct: 106 LPD-PTGASLFRHLHDTFHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHG-F 163
Query: 100 TPTPDAFEKTLHILAR-----MRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQS 154
PT ++ L L R R +D A + + R S + + ++++ +
Sbjct: 164 APTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSP-NVYTYNVIIRGVVSQGD 222
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNK 213
E+ L +ME+E GI +N L+ A C +K++KEA ++ + + A N
Sbjct: 223 LEKGLGFMRKMEKE---GISP-NVVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLI 278
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ N ++ G G ++ + EM +G P VTYN ++G+CK+G + L EM
Sbjct: 279 SYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEM 338
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P++ T TTLI+ N+ +A ++FD+M R L+P+ Y +I + +
Sbjct: 339 VGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLM 398
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
N A +++ EM VTY+ + G ++ + M+E P + +
Sbjct: 399 NEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTV 458
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FC + + ++++G P L+ GLC + + EAF+ ++M+ R
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGL 518
Query: 454 QVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +Y ++ Y V ++ L D M++
Sbjct: 519 PPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 99/370 (26%), Positives = 176/370 (47%), Gaps = 28/370 (7%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+++T + +++ + K + +E FD+M G+R + L+ FC +
Sbjct: 345 PNVVT---YTTLINCMCKAGNLSRAVEIFDQMRVR---GLRP-NERTYTTLIDGFCQKGL 397
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
M EA V +++ S F+P+ T N L+ G+ G V MV RG P VV+Y+
Sbjct: 398 MNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYST 457
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I G+C++ G A ++ EEM LP T ++LI G L + + +A LF EM +R
Sbjct: 458 VIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
L PD Y ++I++ +L+ A+ L DEM ++ DNVTY + GL K + +
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
Query: 373 KL---------------YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+L Y+ +IE + ++V L+K FC+ ++ ++ ++ R
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRN 637
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P+ +L++ G G +A+ + + S A + + LV+A A E +
Sbjct: 638 HKPNAAIYNLMIHGHSRGGNVHKAY----NLYMELEHSSFACHTVAVIALVKALAREGMN 693
Query: 478 D-LDRMIKNL 486
D L R+++N+
Sbjct: 694 DELSRLLQNI 703
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 131/295 (44%), Gaps = 27/295 (9%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
I+ F E +AF E + G+ + ++ L+Q C Q+++ EA +F +++ R
Sbjct: 459 IAGFCRERELGKAFQMKEEMVEKGVLP-DTVTYSSLIQGLCLQQKLVEAFDLFREMMRRG 517
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ T L+ + G+++ + EMV RGF P VTY++ I+G KK A
Sbjct: 518 LPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAK 577
Query: 268 RLFEEMERVACLPSLQTITTLIHGA---------GLVRN------IHQARQLFDEMPKRN 312
RL ++ +P T TLI GLV+ +++A ++F M +RN
Sbjct: 578 RLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRN 637
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM-FFGLMKSSGLEGV 371
KP+ YN MI R +++ A L E+E H + HT+ L+K+ EG+
Sbjct: 638 HKPNAAIYNLMIHGHSRGGNVHKAYNLYMELE-----HSSFACHTVAVIALVKALAREGM 692
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFC-VNFR---VDLGLNLWGYLIDRGFCPHG 422
R+++ + K VNF+ +D LN+ + G P G
Sbjct: 693 NDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPDG 747
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 58/144 (40%), Gaps = 1/144 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ FC + M EA VF +L R PN N+++ G G+V Y E+
Sbjct: 613 LVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEHSS 672
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F V + ++G + RL + + R L + L+ N+
Sbjct: 673 FACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDAVL 732
Query: 303 QLFDEMPKRNLKPDIGAYNAMISS 326
+ EM K L PD G +++ +S
Sbjct: 733 NVLTEMAKDGLLPDGGIHSSAPAS 756
>gi|297819626|ref|XP_002877696.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297323534|gb|EFH53955.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 1188
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 109/455 (23%), Positives = 195/455 (42%), Gaps = 24/455 (5%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALE 88
+ ++E+I RI+ ++ P L L ++ L L+ VL R A + G +
Sbjct: 67 AGDVEKIYRILRNY----HSRVPKLELSLNESGIDLRPGLIVRVLSRCGDAGNLGYR--- 119
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + + P + + + + + IL++MR F W L+ +++ +P L+ + +++ R
Sbjct: 120 FFLWATKQPGYCHSYEVCKSMVKILSKMRQFGAVWGLIEEMRKENPELIEPELFVVLIRR 179
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL 204
+ ++ +E D M K+G E F LL A C +K+A VF +
Sbjct: 180 FASANMVKKAVEVLDEMP--------KYGFEPDEYVFGCLLDALCKNGSVKDASKVFEDM 231
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ PN + LL G+ G + + +M G P +V + + GY G
Sbjct: 232 REKIPPNLRYFTSLLYGWCREGKLMEAKEVLVQMKEAGLEPDIVVFTNLLSGYAHAGKMA 291
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L +M + P+ T LI + + +A ++F EM + + DI Y A+
Sbjct: 292 DAYDLLNDMRKRGYEPNANCYTVLIQALCRTEKRMDEAMRVFVEMERYGCEADIVTYTAL 351
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS + ++ ++D+M +K + VTY + K E +L ++M +
Sbjct: 352 ISGFCKWGMIDKGYSVLDDMRKKGVMPSQVTYMQILVAHEKKEQFEECLELIEKMKQIGC 411
Query: 384 VPKTRTVVMLMKFFCVNFR-VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P ++++ C NFR V + LW + G P +++ G S+G EA
Sbjct: 412 HPDLLIYNVVIRLAC-NFREVKEAVRLWNEMEANGLSPGADMFVIMINGFTSQGYLIEAC 470
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
K+M V R S Y L+ L ++KLE
Sbjct: 471 SHFKEM-VSRGIFSAPQYGTLKSLLNTLLRDDKLE 504
>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g22470, mitochondrial; Flags: Precursor
gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 619
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 145/300 (48%), Gaps = 5/300 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI++ + K S+++ L F+ ME + GI K ++ L+ C + + +
Sbjct: 249 SIVIDSLCKDGSFDDALSLFNEMEMK---GI-KADVVTYSSLIGGLCNDGKWDDGAKMLR 304
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ R P+ T + L+ F + G + + Y+EM+ RG P +TYN IDG+CK+
Sbjct: 305 EMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKEN 364
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
C +A ++F+ M C P + T + LI+ + + +LF E+ + L P+ YN
Sbjct: 365 CLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYN 424
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + LNAA EL EM + + VTY + GL + L +++++M +
Sbjct: 425 TLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKS 484
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +++ C +VD +L+ L D+G P ++++ GLC +G EA
Sbjct: 485 RMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEA 544
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 110/215 (51%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ ++C K + + +F ++ S+ PN T N L+LGF +SG + A + + EMV
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG PSVVTY I +DG C G A+ +FE+M++ + +IHG +
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF + + +KPD+ YN MI L + L+ A L +M+E D+ TY+ +
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ SGL +L + M F + T+ M++
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 135/307 (43%), Gaps = 4/307 (1%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+++ +C +K++ A SV + + P+ T + L+ GF G V+ MV
Sbjct: 110 IMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEM 169
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
RP +VT + I+G C KG +A+ L + M P T +++ N A
Sbjct: 170 KQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALA 229
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
LF +M +RN+K + Y+ +I SL + + A+ L +EME K I D VTY ++ G
Sbjct: 230 LDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGG 289
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + K+ MI +P T L+ F ++ L+ +I RG P
Sbjct: 290 LCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPD 349
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ L+ G C EA + M+ + + +Y +L +A ++++D R
Sbjct: 350 TITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA---KRVDDGMR 406
Query: 482 MIKNLQA 488
+ + + +
Sbjct: 407 LFREISS 413
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 76/199 (38%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LFE M + LP+ L + M ++ D+ MI
Sbjct: 53 DAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMI 112
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R + L A ++ + D +T+ T+ G + L DRM+E K
Sbjct: 113 NCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQR 172
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P TV L+ C+ RV L L +++ GF P ++ LC G A +
Sbjct: 173 PDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDL 232
Query: 445 SKQMLVRRRQVSEASYRML 463
++M R + S Y ++
Sbjct: 233 FRKMEERNIKASVVQYSIV 251
>gi|357436823|ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477735|gb|AES58938.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 587
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 101/449 (22%), Positives = 197/449 (43%), Gaps = 51/449 (11%)
Query: 53 TLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHI 112
+LL +L QT + + + + FA+ L +L + + L P F P F+ ++
Sbjct: 90 SLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSL--YLWALNQPGFKPDSSLFDSVINA 147
Query: 113 LARMRYFDQAWELM----SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD--RME 166
LA+M+ FD AW L+ L+++ + +I++ R ++ ++ + F+ + +
Sbjct: 148 LAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEFAKDK 207
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMNILLLGFK 223
+ I + + F +L+ + C + +EA ++ + P+ + NI+L G+
Sbjct: 208 KSIVDSVSEMSL--FEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNGWF 265
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ + E + EM RPSVVTY ++GYC+
Sbjct: 266 RARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCR------------------------ 301
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+R + +A ++ EM K +KP+ YN +I +L A+ +M+
Sbjct: 302 -----------MRRVEKALEMVGEMTKEGIKPNAIVYNPIIDALAEAGRFKEALGMMERF 350
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+IG TY+++ G K+ +EG K+ +MI F+P T ++F +V
Sbjct: 351 HVLQIGPTLSTYNSLVKGFCKAGDIEGASKILKKMISRGFLPIPTTYNYFFRYFSRCGKV 410
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D G+NL+ +I+ G P L++ LC + E A + S +M + + A+ ML
Sbjct: 411 DEGMNLYTKMIESGHNPDRLTYHLVLKMLCEEEKLELAVQVSMEMRHKGYDMDLATSTML 470
Query: 464 QRYLVQANA-NEKLEDLDRMIKNLQAVLP 491
L + + E + + MI+ + ++P
Sbjct: 471 THLLCKMHKLEEAFAEFEDMIR--RGIIP 497
>gi|357167759|ref|XP_003581319.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Brachypodium distachyon]
Length = 554
Score = 129 bits (323), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 131/296 (44%), Gaps = 35/296 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FNVL++ F E+ AR VF ++ P T N L+ G + D+ A++ Y EM
Sbjct: 189 FNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLISGMCRARDLDAVDGLYKEMSD 248
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G +P V TY I G+C+ G +A+++F EM P+ TTLI N++
Sbjct: 249 VGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAVVFTTLIDAHCKEGNVNA 308
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
L+ +M R + PD+ AYNA+++ L R R+L AA +++EM+ + D VTY T+
Sbjct: 309 GMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEMKNAGLKPDKVTYTTLID 368
Query: 361 GLMKS-----------------------------SGLEGVCKLYD------RMIEGKFVP 385
G K SGL + D M+E P
Sbjct: 369 GCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAGRPVDAERVLREMMEAALEP 428
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T M++ FC V G L + ++G P ++++ GLC G+ + A
Sbjct: 429 DNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKGKKPGVVTYNVIMNGLCKLGQMKNA 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 113/260 (43%), Gaps = 5/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY +++ G P +N+ + + + G A ++F+EM R + P++ T TLI G
Sbjct: 173 FYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRR-SVQPTVVTFNTLISGMC 231
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
R++ L+ EM +KPD+ Y A+I R + A+++ +EM + + + V
Sbjct: 232 RARDLDAVDGLYKEMSDVGVKPDVYTYGALIKGFCRTGRMENAVKMFNEMRDTGVNPNAV 291
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ T+ K + LY M +P L+ C + ++ +
Sbjct: 292 VFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARNLKAAESIVEEM 351
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ G P L+ G C G+ + A + ++M + + E +Y L L +A
Sbjct: 352 KNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTALISGLSKAG-- 409
Query: 474 EKLEDLDRMIKN-LQAVLPP 492
+ D +R+++ ++A L P
Sbjct: 410 -RPVDAERVLREMMEAALEP 428
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 81/356 (22%), Positives = 140/356 (39%), Gaps = 48/356 (13%)
Query: 88 EFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSI 144
E + F LQ P F + R+ A ++ ++R+ P+++T ++
Sbjct: 169 EAYTFYLQLLDAGMAPETRLFNVLMRDFVRLGELVSARKVFDEMRRSVQPTVVTFNTLIS 228
Query: 145 MLSRISKFQSYEETLEAFDRMEREIF-VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ R L+A D + +E+ VG+ K + L++ FC M+ A +F +
Sbjct: 229 GMCR-------ARDLDAVDGLYKEMSDVGV-KPDVYTYGALIKGFCRTGRMENAVKMFNE 280
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + PN L+ + G+V A Y +M +RG P +V YN ++G C+
Sbjct: 281 MRDTGVNPNAVVFTTLIDAHCKEGNVNAGMDLYQDMRVRGVMPDLVAYNALVNGLCRARN 340
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHG-----------------------------AG 293
A + EEM+ P T TTLI G
Sbjct: 341 LKAAESIVEEMKNAGLKPDKVTYTTLIDGCCKDGKLDMAMDIKQKMAEKEVSLDEVTYTA 400
Query: 294 LVRNIHQARQLFD------EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ + +A + D EM + L+PD Y +I + R D+ +L+ EM+ K
Sbjct: 401 LISGLSKAGRPVDAERVLREMMEAALEPDNTTYTMVIDAFCRKGDVKTGFKLLKEMQNKG 460
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
VTY+ + GL K ++ L M+ P T +L+ C + +V
Sbjct: 461 KKPGVVTYNVIMNGLCKLGQMKNADMLLHAMLNIGVSPDDITYNILLDGQCKHGKV 516
>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At2g02150-like [Brachypodium distachyon]
Length = 692
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 162/354 (45%), Gaps = 9/354 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T ++ ++ KF E F M+RE + F+ + AFC
Sbjct: 262 PDVVTYNAL---VNCFCKFGRMERAYSYFAEMKREGVMA----NVVTFSTFVDAFCKNGM 314
Query: 194 MKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
++EA +F ++ + PN T L+ G ++G + + +EMV +G +VVTY +
Sbjct: 315 VREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTV 374
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+DG CK+G +A +F MER + TTLIHG + +N +A L EM +
Sbjct: 375 LVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKG 434
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++ D+ Y A+I L + L+ A L+++M+E + +NV Y + K+
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L +M++ F P T L+ C +D ++ + ++D G P+ A LV GL
Sbjct: 495 ALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSE-ASYRMLQRYLVQANANEKLEDLDRMIKN 485
C GR ++A +M+ + + ++ +L Q N + +MI +
Sbjct: 555 CKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINS 608
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 108/430 (25%), Positives = 190/430 (44%), Gaps = 49/430 (11%)
Query: 16 ISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHL---PQTTPLSSTLVENV 72
ISDRL LL S Q+ + + HP P H L H+ + P S +L+ +
Sbjct: 44 ISDRLRLLHSL--QAVPADHLL----SHPLPSSA-HLCLAAHILARARLFPHSRSLLSRL 96
Query: 73 LGRLFAAH-SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ- 130
L H + L L P + P + L +LA D A ++ V+
Sbjct: 97 LAPGHHPHLAASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLDDAVLALARVRE 156
Query: 131 -RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFGSEEFNVLLQAF 188
R P+ T + + L+R +S E F+++ +F FN+++
Sbjct: 157 LRVPPNTRTCNHILLCLAR---ERSSELAWRLFEQLPAPNVFT---------FNIMIDFL 204
Query: 189 CTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C + ++ EAR++ ++ + +P+ T N L+ G+ + G++ +E EM G RP V
Sbjct: 205 CKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDV 264
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQL 304
VTYN ++ +CK G A F EM+R + ++ T +T + G+VR +A +L
Sbjct: 265 VTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVR---EAMKL 321
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG--- 361
F +M + +KP+ Y ++ + L+ A+ L +EM ++ + + VTY + G
Sbjct: 322 FAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCK 381
Query: 362 ------------LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
LM+ +G+ LY +I G FV K + + + ++L ++L
Sbjct: 382 EGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSL 441
Query: 410 WGYLIDRGFC 419
+G LI G C
Sbjct: 442 YGALI-WGLC 450
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 104/417 (24%), Positives = 168/417 (40%), Gaps = 50/417 (11%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
T P +T + RL HS L+A+ L HP P+ HILAR R F
Sbjct: 32 STLPTGTTAATPISDRLRLLHS--LQAVPA-DHLLSHP--LPSSAHLCLAAHILARARLF 86
Query: 120 DQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ L+S + HP L S+ +L R + + +G R+
Sbjct: 87 PHSRSLLSRLLAPGHHPHLAA--SLVDLLHRAA------------------LALGPRRSA 126
Query: 178 -SEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMN-ILLLGFKESGDVTAMEMF 234
+ LL + + +A ++ R PN +T N ILL +E A +F
Sbjct: 127 LPSVVDTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRLF 186
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
P+V T+NI ID CK+G +A L M+ + C P + T +LI G G
Sbjct: 187 EQLPA-----PNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGK 241
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + +L EM +PD+ YNA+++ + + A EM+ + + + VT
Sbjct: 242 CGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVT 301
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ T K+ + KL+ +M P T L+ C R+D L L ++
Sbjct: 302 FSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMV 361
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+G + +LV GLC G+ EA E +R+++R ++AN
Sbjct: 362 QQGVPLNVVTYTVLVDGLCKEGKVAEA---------------EDVFRLMERAGIRAN 403
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 94/207 (45%), Gaps = 3/207 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEM 238
+ L+ C +++ EA+S+ K+ PNN NI+ FK + A+ + +M
Sbjct: 442 YGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALL-QKM 500
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ GFRP++VTY +DG CK G +A+ F +M + P++Q T L+ G +
Sbjct: 501 MDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRL 560
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L DEM + + D +++ ++ +L A L +M + D Y
Sbjct: 561 DKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCF 620
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+G + ++ ++ MIE P
Sbjct: 621 VWGFCNLNMIQEAREVLSEMIENGITP 647
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 118/298 (39%), Gaps = 56/298 (18%)
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
G++A E TL H HF E+ L +L+ M+ D+ EL +
Sbjct: 399 GIRANELLYTTLIHGHFVYKNS--ERALSLLSEMK--DKGMEL------------DVSLY 442
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++ + Q +E ++M+ G++ N++ F +KE EA ++
Sbjct: 443 GALIWGLCNLQKLDEAKSLLNKMDE---CGLKPNNVIYTNIMDACFKARKE-SEAIALLQ 498
Query: 203 KLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K++ S F PN T L+ G ++G + +++MV G P+V Y +DG CK G
Sbjct: 499 KMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNG 558
Query: 262 CFGDAMRLFEEM-------ERVACLP----------------------------SLQTIT 286
A+ L +EM + V C L T
Sbjct: 559 RLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYT 618
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+ G + I +AR++ EM + + PD YN +I+ + ++ A L +EME
Sbjct: 619 CFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEME 676
>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Cucumis sativus]
Length = 611
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 142/309 (45%), Gaps = 8/309 (2%)
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
LEAF R + K N LL A + E V+ +++ R +PN T N
Sbjct: 180 LEAFKRAGDYRY----KLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNT 235
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG---DAMRLFEEME 274
++ G + G + +M + GF P+VVTYN IDGYCK G G A + +EM
Sbjct: 236 VINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV 295
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P+ T LI G N+ A ++F+EM + LKP + YN++++ L LN
Sbjct: 296 ENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLN 355
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+DEM + + +TY+ + G K LE +L+D + + P T L+
Sbjct: 356 EAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLL 415
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C +++ L ++++GF P+ + L+ G C G+ EE +M R +
Sbjct: 416 HGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVK 475
Query: 455 VSEASYRML 463
+Y +L
Sbjct: 476 ADTVTYNIL 484
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 147/296 (49%), Gaps = 5/296 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAM---EMFYH 236
FN ++ C ++ +A V + + F PN T N L+ G+ + G V M +
Sbjct: 233 FNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILK 292
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV P+ VT+N+ IDG+CK A+++FEEM+ P++ T +L++G
Sbjct: 293 EMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEG 352
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+++A+ L DEM NLKP++ YNA+I+ + + L A EL D + ++ + + +T++
Sbjct: 353 KLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFN 412
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G K +E L M+E F+P T L+ FC +++ NL + R
Sbjct: 413 TLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCR 472
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQAN 471
G ++L++ C + ++A +ML + + S +Y +L Y ++ N
Sbjct: 473 GVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGN 528
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 180/414 (43%), Gaps = 23/414 (5%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ 121
PL S LV+ N +EF + +P F ++ L ++ ++
Sbjct: 199 NPLLSALVK----------ENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNK 248
Query: 122 AWELMS--HVQRTHPSLLTLKSM---SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
A +++ V P+++T ++ + R+ K + L +E+
Sbjct: 249 AGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL-------KEMVENKVSP 301
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
S FNVL+ FC + + A VF ++ S+ P T N L+ G G + ++
Sbjct: 302 NSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLL 361
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM+ +P+V+TYN I+GYCKK +A LF+ + + P++ T TL+HG
Sbjct: 362 DEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKF 421
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A L M ++ P+ YN +I R + L++EM+ + + D VTY
Sbjct: 422 GKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTY 481
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + + + +L D M++ P T +L+ +C+ + LNL +
Sbjct: 482 NILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEK 541
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G + ++L+ G C +G+ E+A +ML + + +Y +++ +++
Sbjct: 542 EGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMME 595
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 131/278 (47%), Gaps = 6/278 (2%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ N LL + + +E Y EM+ R P+++T+N I+G CK G A + ++M
Sbjct: 197 SCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDM 256
Query: 274 ERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ P++ T TLI G G V +++A + EM + + P+ +N +I +
Sbjct: 257 KVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKD 316
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+L+AA+++ +EM+ + + VTY+++ GL L L D M+ P T
Sbjct: 317 ENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITY 376
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
L+ +C ++ L+ + +G P+ + L+ G C G+ EEAF K ML
Sbjct: 377 NALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLE 436
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
+ + ++Y L +V K+E++ ++ +Q
Sbjct: 437 KGFLPNASTYNCL---IVGFCREGKMEEVKNLLNEMQC 471
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/302 (27%), Positives = 139/302 (46%), Gaps = 13/302 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
+ +P S T NVL F N AL+ F+ +Q PT + ++ L
Sbjct: 298 KVSPNSVTF--NVLIDGFCKDENLSAALKVFE-EMQSQGLKPTVVTYNSLVNGLCNEGKL 354
Query: 120 DQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
++A L+ + ++ P+++T ++ ++ K + EE E FD + ++ G+
Sbjct: 355 NEAKVLLDEMLSSNLKPNVITYNAL---INGYCKKKLLEEARELFDNIGKQ---GLTP-N 407
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
FN LL +C +M+EA + +L + F PN T N L++GF G + ++ +
Sbjct: 408 VITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLN 467
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM RG + VTYNI I +C+K A RL +EM PS T L++G +
Sbjct: 468 EMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEG 527
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ A L +M K ++ YN +I R L A L++EM EK + + TY
Sbjct: 528 NLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYE 587
Query: 357 TM 358
+
Sbjct: 588 II 589
>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
Length = 457
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 165/353 (46%), Gaps = 10/353 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P + L L + + F++A + + Q P++ S SI+++ + + Q +E
Sbjct: 49 VPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQGCSPNVF---SYSILIAGLCRGQKVDE 105
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-N 216
E + E+ G + + LL C ++KEA +F +++ R P + + N
Sbjct: 106 AAELLN----EMIDGGHQPNVVTYGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYN 161
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L+ GF + GD+ + EM+ +G P+V TYN + G+ +KG FG LF++M R
Sbjct: 162 VLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQ 221
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C+P++ T L+ G + ++ +A +LF EM PD+ +YN ++ + + A
Sbjct: 222 GCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEA 281
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L+ EM +G D V+Y+ + G KS L+ KL+ + + P + ++
Sbjct: 282 QRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDC 341
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
C +V ++ +I G P + LV GLC R E+ E + M+
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMV 394
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 94/347 (27%), Positives = 169/347 (48%), Gaps = 12/347 (3%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMSH-VQRTH-PSLLTLKSMSIMLSRISKFQSYEE 157
+P+ F ++ I L R + D+A EL++ + H P+++T S+ LS + K +E
Sbjct: 84 SPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL---LSGLCKMGKLKE 140
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
++ F RM ++ G G +NVL+ F + +M EA +F ++L + P T N
Sbjct: 141 AVDLFSRM---VYRGCPPDGVV-YNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL GF G+ ++ + +M+ +G P++ T+N +DG+CK G +A RLF EM +
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + + TL+ G H+A++L EM + + PDI +YN +I + L+ A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++L E+ + + D +Y T+ L ++ + ++ MI P V+ L+
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C R+ L+ ++ P +LL+ LC R ++ E
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCE 423
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 122/309 (39%), Gaps = 7/309 (2%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
G+ +N LL+ + +L + PN T LL ++ +
Sbjct: 16 GTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVF 75
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M +G P+V +Y+I I G C+ +A L EM P++ T +L+ G +
Sbjct: 76 RGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKM 135
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A LF M R PD YN +I + D+ A L +EM EK TY
Sbjct: 136 GKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTY 195
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+++ G + V L+ M+ VP T L+ FC + L+ +
Sbjct: 196 NSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRS 255
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
G P + + L+ G+CS+G+ EA ++M+ SY +L + K
Sbjct: 256 LGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNIL------IDGYSK 309
Query: 476 LEDLDRMIK 484
LD IK
Sbjct: 310 SGALDHAIK 318
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 21/292 (7%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
+V NVL F+ + +A F+ L+ PT + L +R F + L
Sbjct: 158 VVYNVLIDGFSKKGDMGEAYRLFEEMLEK-GCIPTVFTYNSLLSGFSRKGEFGRVQSLFK 216
Query: 128 HV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EF 181
+ Q P++ T ++ + F + +EA +F+ +R G +
Sbjct: 217 DMLRQGCVPNIFTFNNL------LDGFCKMGDMVEA-----HRLFLEMRSLGCPPDVVSY 265
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMV 239
N L++ C++ + EA+ + +++ S P+ + NIL+ G+ +SG + A+++FY E+
Sbjct: 266 NTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFY-EIP 324
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +Y+ ID C+ G G A +F++M P + L+ G +
Sbjct: 325 KSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLT 384
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ +LF M K P I YN ++ L + + + E+ E+ E+ D
Sbjct: 385 ESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/207 (21%), Positives = 90/207 (43%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ ++YN ++ K G + +M C+P+ T L+ + +AR
Sbjct: 13 YNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEAR 72
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+F M + P++ +Y+ +I+ L R + ++ A EL++EM + + VTY ++ GL
Sbjct: 73 SVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGL 132
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K L+ L+ RM+ P +L+ F + L+ ++++G P
Sbjct: 133 CKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTV 192
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
+ L++G +G + K ML
Sbjct: 193 FTYNSLLSGFSRKGEFGRVQSLFKDML 219
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 61/135 (45%), Gaps = 1/135 (0%)
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
H ++Y+ + L KS + V Y+ M+ VP T T L++ C R + ++
Sbjct: 15 HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSV 74
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + +G P+ + +L+ GLC + +EA E +M+ Q + +Y L L +
Sbjct: 75 FRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCK 134
Query: 470 -ANANEKLEDLDRMI 483
E ++ RM+
Sbjct: 135 MGKLKEAVDLFSRMV 149
>gi|357498969|ref|XP_003619773.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494788|gb|AES75991.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 452
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 141/272 (51%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ + C K + +A ++ + LL R +P+ T N L+ G G + +++M+
Sbjct: 122 YSTIIYSLCKDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQML 181
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ +P + T+NI +DG CK+G A + M + + P + T +L+ G LV+ +
Sbjct: 182 LKNIKPDIYTFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQEN 241
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+ M +R + PD+ +Y+ MI+ L + + ++ A+ L+ EM K + + VTY ++
Sbjct: 242 KATFVFNTMARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSLI 301
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + L + M T L+ C N +VD + L + D+G
Sbjct: 302 DGLHKSGRIFDAWDLVNEMHNRGQPADVITYNSLLDALCKNHQVDKAITLLTKIKDQGIQ 361
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P + +LV GLC GR ++A E + +L++
Sbjct: 362 PDIYTYTILVDGLCKNGRLKDAQEVYQILLIK 393
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 107/230 (46%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F+ +++ +GF+ + V+Y IDG CK G AM++ ++ + P++ +T+I+
Sbjct: 71 FHDDVIAKGFQLNQVSYGTLIDGLCKAGETRAAMQVLRNIDGLLVQPNVVMYSTIIYSLC 130
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + A L+ +M + + PD+ YN ++ + L A+ L ++M K I D
Sbjct: 131 KDKLVIDAFDLYSQMLLKRISPDVITYNTLMYGCLIVGRLKEAVGLFNQMLLKNIKPDIY 190
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T++ + GL K ++ + MI+ P T LM + + + + ++ +
Sbjct: 191 TFNILVDGLCKEGEMKKARNVLAVMIKQSVDPDVITYNSLMDGYFLVKQENKATFVFNTM 250
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
RG P H+ +++ GLC +EA K+M + + +Y L
Sbjct: 251 ARRGVTPDVHSYSVMINGLCKTKMVDEAVNLLKEMHSKSMAPNTVTYSSL 300
>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
Length = 1244
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 10/332 (3%)
Query: 120 DQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A+ L++ ++ + P +L ++ + + K++ ++ L F ME + GIR
Sbjct: 852 DLAFNLLNKMEQGKLEPGVLIYNTI---IDGLCKYKHMDDALNLFKEMETK---GIRP-N 904
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ C +A + ++ R P+ T + L+ F + G + E Y
Sbjct: 905 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV R PS+VTY+ I+G+C +A ++FE M C P + T TLI G +
Sbjct: 965 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + ++F EM +R L + YN +I L + D + A E+ EM + + +TY+
Sbjct: 1025 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 1084
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL K+ LE +++ + K P T ++++ C +V+ G +L+ L +
Sbjct: 1085 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 1144
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P A + +++G C +G EEA K+M
Sbjct: 1145 GVKPDVVAYNTMISGFCRKGSKEEADALFKEM 1176
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 167/378 (44%), Gaps = 20/378 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT---HPSLLTLKSMSIMLSRISKFQSYEE 157
P+ F K L +A+M FD L +Q H + SI+++ +
Sbjct: 693 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHY----TYSILINCFCRRSQLPL 748
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNN 212
L +M K G E + LL +C K + EA ++ ++ ++ + PN
Sbjct: 749 ALAVLGKM--------MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 800
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N L+ G + MV +G +P +VTY + ++G CK+G A L +
Sbjct: 801 VTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNK 860
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
ME+ P + T+I G +++ A LF EM + ++P++ Y+++IS L
Sbjct: 861 MEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 920
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A L+ +M E++I D T+ + +K L KLYD M++ P T
Sbjct: 921 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 980
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ FC++ R+D ++ +++ + P + L+ G C R EE E ++M R
Sbjct: 981 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRG 1040
Query: 453 RQVSEASYRMLQRYLVQA 470
+ +Y +L + L QA
Sbjct: 1041 LVGNTVTYNILIQGLFQA 1058
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+ A +L S + ++ P ++ + +LS I K + Y+ + +ME +GIR
Sbjct: 169 LNDAIDLFSDMVKSRP-FPSIVDFNRLLSAIVKLKKYDVVISLGKKME---VLGIRN-DL 223
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
FN+++ FC ++ A S+ K+L + P+ T+ L+ GF V+ +
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G++P +V YN ID CK DA F+E+ER P++ T T L++G
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A +L +M K+ + P++ Y+A++ + ++ + A EL +EM I D VTY +
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL ++ +++D M+ + + L+ FC RV+ G+ L+ + RG
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ + L+ G G ++A E QM
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 133/295 (45%), Gaps = 17/295 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
F+ DAF K ++ + +D+ V+R+ PS++T S+ I+ F ++
Sbjct: 943 FSALIDAFVKEGKLVEAEKLYDEM------VKRSIDPSIVTYSSL------INGFCMHDR 990
Query: 158 TLEAFDRMEREIFVGIRKF-GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
EA + E V F +N L++ FC K ++E VF ++ R N T
Sbjct: 991 LDEA--KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 1048
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ G ++GD + + EMV G P+++TYN +DG CK G AM +FE ++R
Sbjct: 1049 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 1108
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T +I G + LF + + +KPD+ AYN MIS R
Sbjct: 1109 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 1168
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A L EM+E ++ Y+T+ ++ E +L M F T+
Sbjct: 1169 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 1223
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K + + + F +ER+ GIR + L+ C +A + +
Sbjct: 299 IIDSLCKTKRVNDAFDFFKEIERK---GIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 354
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T + LL F ++G V + + EMV P +VTY+ I+G C
Sbjct: 355 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 414
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F+ M CL + + TLI+G + + +LF EM +R L + YN +
Sbjct: 415 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 474
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + D++ A E +M+ I D TY+ + GL + LE +++ M + +
Sbjct: 475 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 534
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T +++ C +V+ +L+ L +G P +++GLC++G E
Sbjct: 535 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 592
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 17/267 (6%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSR 148
K T ++ DAF K +L +A EL + R P ++T S+ ++
Sbjct: 358 KITPNVITYSALLDAFVKNGKVL-------EAKELFEEMVRMSIDPDIVTYSSL---ING 407
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ +E + FD M + + +N L+ FC K +++ +F ++ R
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLA----DVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
N T N L+ GF ++GDV + F+ +M G P + TYNI + G C G A+
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+FE+M++ + T TT+I G + +A LF + + LKPDI Y M+S L
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 583
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVT 354
L+ L +M+++ + ++ T
Sbjct: 584 CTKGLLHEVEALYTKMKQEGLMKNDCT 610
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 13/297 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
A +FFK ++ P + ++ L + A L+S + ++ P+++T S
Sbjct: 312 AFDFFK-EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY---S 367
Query: 144 IMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+L K E E F+ M R I I + S L+ C + EA +F
Sbjct: 368 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS-----LINGLCLHDRIDEANQMFD 422
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++S+ + + N L+ GF ++ V + EM RG + VTYN I G+ + G
Sbjct: 423 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 482
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A F +M+ P + T L+ G + +A +F++M KR + DI Y
Sbjct: 483 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 542
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+I + + + A L + K + D VTY TM GL L V LY +M
Sbjct: 543 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 599
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYN--------------------------IRIDGY------ 257
A+++F + R F PS+V +N IR D Y
Sbjct: 172 AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 230
Query: 258 -CKKGCF--GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C CF A+ + +M ++ P TI +L++G + A L D+M + K
Sbjct: 231 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 290
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PDI AYNA+I SL + + +N A + E+E K I + VTY + GL SS +L
Sbjct: 291 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 350
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
MI+ K P T L+ F N +V L+ ++ P L+ GLC
Sbjct: 351 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 410
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
R +EA + M+ + SY L +A +++ED
Sbjct: 411 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA---KRVED 451
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/342 (19%), Positives = 133/342 (38%), Gaps = 53/342 (15%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL C E+++A +F + R + T ++ G ++G V + +
Sbjct: 506 YNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLS 565
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCF------------------------------------ 263
L+G +P +VTY + G C KG
Sbjct: 566 LKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKK 625
Query: 264 ----GDAMRLFEEMERVACLPSLQTI------TTLIHGAGLVRN------IHQARQLFDE 307
G A L ++++ C +L + T+ + L RN + A LF E
Sbjct: 626 MLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGE 685
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M K P I ++ ++S++ + + + L ++M+ I H++ TY + + S
Sbjct: 686 MVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQ 745
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L + +M++ + P T+ L+ +C + R+ + L + G+ P+ +
Sbjct: 746 LPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNT 805
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
L+ GL + EA +M+ + Q +Y ++ L +
Sbjct: 806 LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCK 847
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA+ LF +M + PS+ L+ ++ L +M ++ D+ +N
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 228
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ C ++ A+ ++ +M + D VT ++ G + + + L D+M+E
Sbjct: 229 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 288
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P ++ C RV+ + + + +G P+ LV GLC+ RW +A
Sbjct: 289 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 348
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDRM 482
M+ ++ + +Y L V+ A E E++ RM
Sbjct: 349 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 392
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 84/425 (19%), Positives = 162/425 (38%), Gaps = 48/425 (11%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPD--AFEKTLH 111
L + + Q +S+T+ N L + F + KA EFF Q F +PD + L
Sbjct: 455 LFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFS---QMDFFGISPDIWTYNILLG 511
Query: 112 ILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
L ++A + +Q+ L + + + ++ + K EE F + +
Sbjct: 512 GLCDNGELEKALVIFEDMQKREMDL-DIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGL- 569
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTA 230
K + ++ CT+ + E +++ K+ N+ T++ GD+T
Sbjct: 570 ---KPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLS--------DGDITL 618
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC---------------------------F 263
+M+ G+ PS++ +I+ G CKK
Sbjct: 619 SAELIKKMLSCGYAPSLLK-DIK-SGVCKKALSLLRAFSGKTSYDYREKLSRNGLSELKL 676
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+ LF EM + PS+ + L+ + L ++M + + Y+ +
Sbjct: 677 DDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSIL 736
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ R L A+ ++ +M + + VT ++ G S + L D+M +
Sbjct: 737 INCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGY 796
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T T L+ ++ + + L ++ +G P ++V GLC RG + AF
Sbjct: 797 QPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFN 856
Query: 444 CSKQM 448
+M
Sbjct: 857 LLNKM 861
>gi|356495784|ref|XP_003516753.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 558
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 105/420 (25%), Positives = 197/420 (46%), Gaps = 11/420 (2%)
Query: 32 EIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFK 91
E+E +T+++ +P L L L + SS LV VL R ++ + AL FFK
Sbjct: 96 ELEAVTKVLQKR-YPSPELASLALDGL--SFQPSSGLVSQVLNRF---SNDWVPALGFFK 149
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
+ + +P+ + + IL + R FD EL+ + R +TL++M+ ++ R+++
Sbjct: 150 WAKSLTGYRHSPELYNLMVDILGKCRSFDSMSELVEEMARLE-GYVTLETMTKVMRRLAR 208
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ +E+ +EAF RME+ G++K + NVL+ A ++ A V ++ +
Sbjct: 209 ARKHEDAIEAFGRMEK---FGVKK-DTAALNVLIDALVKGDSVEHAHKVVLEFKGSIPLS 264
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+++ N+L+ G+ + D +M GF P V +Y I+ Y + F ++ E
Sbjct: 265 SRSFNVLMHGWCRARDFDNARKAMEDMKEHGFEPDVFSYTNFIEAYGHERDFRKVDQVLE 324
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM C P+ T T+++ G + +A +++++M D Y++MI L +
Sbjct: 325 EMRENGCPPNAVTYTSVMLHLGKAGQLRKALEVYEKMKSDGCVADTPFYSSMIFILGKAG 384
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
L A ++ ++M ++ + D VTY++M S E +L M +G P T
Sbjct: 385 RLKDACDVFEDMPKQGVVRDVVTYNSMISTACAHSREETALRLLKEMEDGSCKPNVGTYH 444
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+K C R+ + L ++ P LLV L G+ E+A+ ++M++R
Sbjct: 445 RLLKMCCKKKRMKVLKFLLDHMFKNNISPDLATYSLLVNALRKSGKVEDAYSFLEEMVLR 504
>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++ R+I + K E +N ++ A C + + EA +F ++ ++ + + T L+ GF
Sbjct: 185 KLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGF 244
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ + +EMVL+ P+V TYNI +D CK+G +A + M + P +
Sbjct: 245 CIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDV 304
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +TL+ G LV + +A+ +F+ M + PD+ +Y +I+ + + ++ A+ L E
Sbjct: 305 ITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKE 364
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M +K + VTY ++ GL KS + V L D M + T L+ C N
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGH 424
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR- 461
+D + L+ + D+G P +L+ GLC GR ++A E + +L + + Y
Sbjct: 425 LDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNV 484
Query: 462 MLQRYLVQANANEKLEDLDRMIKN 485
M+ + Q E L L +M +N
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEEN 508
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 157/338 (46%), Gaps = 5/338 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K+Q E F M + GI + L+ FC ++KEA + ++
Sbjct: 205 IIDALCKYQLVSEAYGLFSEMTAK---GISA-DVVTYTTLIYGFCIASKLKEAIGLLNEM 260
Query: 205 -LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L PN T NIL+ + G V + M+ +P V+TY+ +DGY
Sbjct: 261 VLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYEL 320
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A +F M + P + + T LI+G + + +A LF EM ++N+ P I Y+++
Sbjct: 321 KKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL 380
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + ++ +L+DEM ++ I + +TY+++ GL K+ L+ L+++M +
Sbjct: 381 IDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGI 440
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P + T +L+ C R+ + L+ +G+ + ++++ G C +G EEA
Sbjct: 441 RPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALT 500
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+M + ++ ++ L + + N+K E L R
Sbjct: 501 MLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLR 538
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 87/368 (23%), Positives = 157/368 (42%), Gaps = 12/368 (3%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH---VQRTHPSLLTLKSMSIMLSRISKFQSYE 156
TP F K L A+++++ A L SH ++ P L+TL + I+ F
Sbjct: 56 TPPIIQFNKILDSFAKIKHYSTAVSL-SHRLELKGIQPDLITLNIL------INCFCHMG 108
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ F + + + G + + F L++ C + ++ +A KLL++ + +
Sbjct: 109 QITFGFSVLAKILKRGYQPH-TITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSY 167
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G + GD ++ R +P+V YN ID CK +A LF EM
Sbjct: 168 GTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTA 227
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ T TTLI+G + + +A L +EM + + P++ YN ++ +L + +
Sbjct: 228 KGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKE 287
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A ++ M + + D +TY T+ G L+ +++ M P + +L+
Sbjct: 288 AKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILIN 347
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC N VD LNL+ + + P L+ GLC GR ++ +M R
Sbjct: 348 GFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPA 407
Query: 456 SEASYRML 463
+ +Y L
Sbjct: 408 NVITYNSL 415
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 95/201 (47%), Gaps = 1/201 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ +L+ FC K + EA ++F ++ + P T + L+ G +SG ++ + EM
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG +V+TYN IDG CK G A+ LF +M+ P T T L+ G +
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A++ F ++ + D+ YN MI+ + L A+ ++ +MEE + VT+ +
Sbjct: 461 KDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDII 520
Query: 359 FFGLMKSSGLEGVCKLYDRMI 379
L K + KL +MI
Sbjct: 521 INALFKKDENDKAEKLLRQMI 541
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 112/251 (44%), Gaps = 1/251 (0%)
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ + +A S F ++L R P N +L F + + H + L+G +P ++T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI I+ +C G + ++ + P T TTLI G L +++A D++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ +K D +Y +I+ + + D A++L+ +++ + + Y+T+ L K +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L+ M T L+ FC+ ++ + L ++ + P+ + ++LV
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 431 GLCSRGRWEEA 441
LC G+ +EA
Sbjct: 278 ALCKEGKVKEA 288
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/218 (23%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPD T+ I + + D+A L H + P ++T S+ + + K
Sbjct: 336 TPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSL---IDGLCKSGRISY 392
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ D M +R I + +N L+ C + A ++F K+ + P + T
Sbjct: 393 VWDLIDEMRDRGIPANVI-----TYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTF 447
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
ILL G + G + + + +++ +G+ V YN+ I+G+CK+G +A+ + +ME
Sbjct: 448 TILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEE 507
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C+P+ T +I+ +A +L +M R L
Sbjct: 508 NGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545
>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
Length = 707
Score = 128 bits (322), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 119/254 (46%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+ AP+ T NIL+ G ++ HEMV RG P VT+N +DG CK G F A
Sbjct: 5 KVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERA 64
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
L M C PS T TLI G +N+ +A+ L DE PD+ Y+ +
Sbjct: 65 HSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + ++ A EL+ EM + VTY+T+ GL K+S E +L + ++ FVP
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +++ C R+D L + ++ RG P L+ GLC GR +EA K
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244
Query: 447 QMLVRRRQVSEASY 460
+M+ + +Y
Sbjct: 245 EMVSKDCTADALAY 258
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 172/396 (43%), Gaps = 19/396 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F + I L + D+A E++ + + P +T S+ L + KF+
Sbjct: 8 PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L ER + +N L+ C Q+ + A+++ + +S F P+ T +I
Sbjct: 68 LAVM--AERNC-----RPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L G + G + EM G P++VTYN IDG CK A L E +
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P + T T ++ G + +A ++ + M KR P + Y A++ L R ++ A
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ EM K D + Y ++ G KSS + K+ D + + P LM +
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYIDVYNALMDGY 297
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C R+D N++ + RG P+ ++++ GLC G+ +EAF + M
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357
Query: 458 ASYRMLQRYLVQANA-NEKLEDLDRMIKNLQAVLPP 492
SY ++ L +A+ E + LD+MI QA +PP
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMI---QAGIPP 390
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 161/375 (42%), Gaps = 13/375 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
KA E + TL F P + + L + D+A +++ + + PS++T ++
Sbjct: 168 KAYELLE-TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTAL 226
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
L R + +E F M + + + L+ +C KEA+ V
Sbjct: 227 MEGLCRTGRV---DEAHHIFKEMVSKDCTA----DALAYVSLVNGYCKSSRTKEAQKVVD 279
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R P N L+ G+ + G + + + +M RG P++ TYNI +DG CK G
Sbjct: 280 GI--RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 337
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A E M C+P + + +I G +ARQ+ D+M + + PD YN
Sbjct: 338 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 397
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EG 381
+++ + + A+ ++ M + + DNVTY+T+ GL +++ L +L M+ G
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
V T ++ C + L L ++ G + ++ + LC GR +EA
Sbjct: 458 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517
Query: 442 FECSKQMLVRRRQVS 456
+M R +VS
Sbjct: 518 SSLLSEMDTLRDEVS 532
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 138/350 (39%), Gaps = 46/350 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ + KEAR V +++ + P+ T N L+ F + M+
Sbjct: 360 YNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMI 419
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS-LQTITTLIHGAGLVRNI 298
G P VTYN I G + GDA L EM R C+ S T T+I +
Sbjct: 420 KAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCL 479
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA L D M ++ + YN I L + L+ A L+ EM+ R D V+Y T+
Sbjct: 480 KQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLR---DEVSYTTV 536
Query: 359 FFGLMKSSGLE-------------GVC-----------------------KLYDRMIEGK 382
GL K+ L+ G+C L + M++
Sbjct: 537 IIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRG 596
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T M++ C +VD L+ + RG + +L+ GLC +GR +EA
Sbjct: 597 CSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEAL 656
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLV---QANANEKLEDLDRMIKNLQAV 489
+ ++M ++ + R L YL Q E E L RM + ++
Sbjct: 657 QVLEEMASSDCEIDDLKCRKL--YLALRGQGRGEEAAELLRRMTTKMDSL 704
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R + PD+ YN +I L + + A E++ EM ++ + D VT++++ GL K+
Sbjct: 1 MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
E L M E P T L+ C VD L + GF P +
Sbjct: 61 FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
L GLC RGR +EAFE K+M + +Y L L +A+ EK +L
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYEL 172
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 104/276 (37%), Gaps = 35/276 (12%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD + TL+ L QT N LG A E L++
Sbjct: 425 PDNVTYNTLISGLSQT---------NRLG----------DAYELMHEMLRNGCVVSACTT 465
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET---LEAF 162
+ + L + QA LM H+ H + +I + R+ K +E L
Sbjct: 466 YNTIIDRLCKEGCLKQALLLMDHMT-GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM 524
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLL 220
D + E+ + ++ C +++ A + ++++ + T N+L+
Sbjct: 525 DTLRDEV----------SYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLID 574
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
F ++ + MV RG PSV+TYN+ I CK A LF+EM +
Sbjct: 575 AFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVA 634
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
S + T LI+G +A Q+ +EM + + D
Sbjct: 635 SSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEID 670
>gi|225431703|ref|XP_002264696.1| PREDICTED: pentatricopeptide repeat-containing protein At2g13420,
mitochondrial [Vitis vinifera]
gi|296088528|emb|CBI37519.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 205/470 (43%), Gaps = 31/470 (6%)
Query: 18 DRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLF 77
D L+ + S + + I++I+ H P + +L + LS+ LV L RL
Sbjct: 38 DALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLN---GIALSTHLVHQTLLRL- 93
Query: 78 AAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPS 135
+ AL FF + H + ++ + ILA++R FD AW+ + + + P+
Sbjct: 94 --RNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPT 151
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
T + I++ R + + AFD M FV + S++F LL +K
Sbjct: 152 STTFR---ILIRRSVSAGLTRQAVRAFDDMS--CFVE-KDADSDDFCYLLDTLSKYGYVK 205
Query: 196 EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A +F + +F N K IL+ G+ + V+ E EMV RG +VVTYN+ ++
Sbjct: 206 LASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGIEANVVTYNVLLN 265
Query: 256 GYCKKGCFG----------DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
G C++ DA ++ +EM + P + + + +IH + H+
Sbjct: 266 GICRRASLHPDDRFERTIRDAEKVLDEMRQKGIEPDVTSYSIVIH---VYSRAHKPELTL 322
Query: 306 DE---MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
D+ M + + P + Y +++ L C L A EL+ +M + + TY+ F
Sbjct: 323 DKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEY 382
Query: 363 MKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ +LY +M E +P T +L+ F R+++ +W + G P
Sbjct: 383 RGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPD 442
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ LL+ GLC + +W+EA +M+ + + ++ L R L+Q++
Sbjct: 443 LDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSD 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P T ++ G + E +MV G PS TYN Y + +A+RL
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRL 394
Query: 270 FEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ +M E +CLP + T L+ + + ++++D+M PD+ +Y +I L
Sbjct: 395 YRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLC 454
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ A EM EK +T+ T++ GL++S L+ +L ++ E
Sbjct: 455 EKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEE 506
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 10/223 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S SI++ S+ E TL+ M ++ I+ + + S +++ C+ +++A
Sbjct: 302 VTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTS-----VVKCLCSCGRLEDA 356
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRID 255
+ ++ +P+ T N ++ D Y +M P + TYNI +
Sbjct: 357 EELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVG 416
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
+ K ++++M+ P L + T LIHG + +A F EM ++ P
Sbjct: 417 MFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLP 476
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI--GHDNVTYH 356
+ + LI+ L L ++EE+ I G + YH
Sbjct: 477 QKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQQYH 519
>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 834
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 149/304 (49%), Gaps = 2/304 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K +++A ++ ++ R PN T L+ GF G + +EMV
Sbjct: 192 YNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMV 251
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P+V T+N +DG CK+G +A L M + P + T L+ G LV+
Sbjct: 252 LKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAG 311
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M + + D+ +Y+ MIS L + + L+ AM+L + M + + D V Y ++
Sbjct: 312 KAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLI 371
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + K D M + P T L+ C + +VD + L + D+G
Sbjct: 372 DGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQ 431
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLED 478
+ + ++LV GLC GR +A + + +L++ V +Y ++ L + + +E L
Sbjct: 432 ANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTL 491
Query: 479 LDRM 482
L +M
Sbjct: 492 LSKM 495
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 103/428 (24%), Positives = 179/428 (41%), Gaps = 55/428 (12%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
L H HF P+ + A + + + R P +K I L + K +
Sbjct: 19 LSHTHFHSLPN--------------LNDAIDSFNRMLRMRPPPPIIKFGKI-LGSLVKTK 63
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNN 212
Y + F RME GI+ N+L+ ++C +++ A SVF K+L + P+
Sbjct: 64 HYPIVIHLFQRMELH---GIQS-NYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDI 119
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T L+ G +G V F+ +V +G + V+Y I+G CK G G A+RL +
Sbjct: 120 ITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRK 179
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+E C P + T+I G + + A L+ EM ++ + P++ Y ++I
Sbjct: 180 IEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQ 239
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL------------EGVCK---LYDR 377
L+ A L++EM K + + T++T+ GL K + EGV Y+
Sbjct: 240 LDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNA 299
Query: 378 MIEGKFV----PKTRTVVMLMKFFCVNFRV----------------DLGLNLWGYLIDRG 417
+++G F+ K + V +M V V D ++L+ + +
Sbjct: 300 LMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNEN 359
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P A L+ GLC GR A + +M R + + +Y L L +++ +K
Sbjct: 360 VIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAI 419
Query: 478 DLDRMIKN 485
L + IK+
Sbjct: 420 ALLKKIKD 427
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/327 (22%), Positives = 146/327 (44%), Gaps = 10/327 (3%)
Query: 160 EAFD----RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKT 214
+AFD E+ +F + + S L+ FC ++ +A + ++ L PN T
Sbjct: 207 DAFDLYCEMFEKRVFPNVVTYTS-----LIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCT 261
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G + G + + M+ G P V TYN +DGY G A +F M
Sbjct: 262 FNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMA 321
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
++ + + + +I G ++ + +A LF+ M N+ PD+ AY+++I L + +N
Sbjct: 322 QMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRIN 381
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+A++ +DEM ++ + +TY ++ L KS ++ L ++ + T +L+
Sbjct: 382 SALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILV 441
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + R+ ++ L+ +G +++ GLC ++EA +M +
Sbjct: 442 DGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCV 501
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDR 481
+Y + + + N+K E L R
Sbjct: 502 PDAIAYETIINAFFEKDMNDKAEKLLR 528
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 83/183 (45%), Gaps = 32/183 (17%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFV-----------GIRKFGSEE--------- 180
S S+M+S +SK + +E ++ F+ M E + G+ K G
Sbjct: 331 SYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEM 390
Query: 181 -----------FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ L+ A C ++ +A ++ K+ + N T NIL+ G + G +
Sbjct: 391 HDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRL 450
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
T + + +++++G VVTY+I I+G CK+ F +A+ L +ME C+P T+
Sbjct: 451 TDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510
Query: 289 IHG 291
I+
Sbjct: 511 INA 513
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 92/201 (45%), Gaps = 1/201 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++V++ K + EA +F + + P+ + L+ G +SG + + + EM
Sbjct: 332 YSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMH 391
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+V+TY ID CK A+ L ++++ ++ T L+ G +
Sbjct: 392 DRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLT 451
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+++F ++ + D+ Y+ MI+ L + + A+ L+ +ME+K D + Y T+
Sbjct: 452 DAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETII 511
Query: 360 FGLMKSSGLEGVCKLYDRMIE 380
+ + KL MI+
Sbjct: 512 NAFFEKDMNDKAEKLLREMID 532
>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
Length = 973
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K M+EAR+ +++L R PN T + G+ ++G++ + +++EM+
Sbjct: 489 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V Y I+G+CK+G +A +F + L +QT + LIHG +H
Sbjct: 549 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 608
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F E+ ++ L P+ YN++IS + +++ A +L++EM K I D VTY+ +
Sbjct: 609 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 668
Query: 360 FGLMKSSGLEGVCKLYDRMIEGK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ +E L+D IEG+ P T ++ +C + L ++ RG
Sbjct: 669 DGLCKAGEIERAKNLFDD-IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 727
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P ++++ C ++E+A + ++ML + + + +++ Y E
Sbjct: 728 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHL 787
Query: 479 LDRMIK 484
L+ MI+
Sbjct: 788 LEEMIE 793
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 5/304 (1%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ ++VL+ +M EA +F +L + PN T N L+ G + G+V E
Sbjct: 592 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 651
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M ++G P +VTYNI IDG CK G A LF+++E P+ T ++ G +N
Sbjct: 652 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 711
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A QL +EM R + PD YN +++ + A++L EM EK V+++T
Sbjct: 712 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNT 770
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G KS L+ L + MIE +F+P T L+ C + LW + +R
Sbjct: 771 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 830
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE-- 474
P L+ G + G E ++M+ + + + +Y M+ Y + N E
Sbjct: 831 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 890
Query: 475 KLED 478
KL+D
Sbjct: 891 KLKD 894
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ FC +K +EA+ + ++++ P T N L+ GF GD+ EMV
Sbjct: 279 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 338
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +++ +N ++G CK G A+ + +EM P QT + LI G +N+
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 398
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM KR L P + Y+ +I+ L RC +L ++ EM + + V Y T+
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K +E + +RM E +P L+ FC R++ +++R
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ H + G G E A +ML
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEML 548
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/346 (23%), Positives = 151/346 (43%), Gaps = 27/346 (7%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQK 192
PSLL+ S+ L + K E + FD M ++ + + + ++ A C
Sbjct: 187 PSLLSCNSL---LGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTN-----MISAHCKVG 238
Query: 193 EMKEARSVFVKLLSR------------------FAPNNKTMNILLLGFKESGDVTAMEMF 234
+K+A+ V +++ + P+ T +IL+ GF ++
Sbjct: 239 NVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLM 298
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
EM+ G +P +TYN IDG+ ++G A R+ +EM +L TL++G
Sbjct: 299 LLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCK 358
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A ++ EM ++ ++PD Y+ +I R +++ A EL+DEM+++++ +T
Sbjct: 359 AGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLT 418
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + GL + L+G + M+ P LM RV+ + +
Sbjct: 419 YSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMR 478
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
++G P + L+ G C R EEA +ML RR + + +Y
Sbjct: 479 EQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 524
Score = 95.1 bits (235), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 91/163 (55%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+NV+L C +++ ++A +F ++L + + + N L+ G+ +SG + EM+
Sbjct: 734 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 793
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+ F P+ VTY ID CK G G+A RL+ EM+ +P+ +T T+L+HG + N+ +
Sbjct: 794 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 853
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
LF+EM + ++PD Y MI + R ++ A +L DE+
Sbjct: 854 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEI 896
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C +M++A + +++ + P+++T ++L+ G ++ EM
Sbjct: 349 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 408
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+V+TY++ I+G C+ G + EM P+ TTL+ +
Sbjct: 409 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 468
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++R + + M ++ + PD+ YN++I + + + A + EM E+R+ + TY
Sbjct: 469 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 528
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ +E + ++ M+ +P L++ C V +++ +++ R
Sbjct: 529 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 588
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
+L+ GL G+ EAF
Sbjct: 589 QDVQTYSVLIHGLSRNGKMHEAF 611
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/365 (22%), Positives = 157/365 (43%), Gaps = 19/365 (5%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISK 151
LQ P + + + D+A +L+ ++ +P ++T +I++ + K
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTY---NILIDGLCK 673
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
E FD +E + ++ +C K A + ++L R P
Sbjct: 674 AGEIERAKNLFDDIEGRGLTP----NCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729
Query: 212 NKTMNILLLGF--KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ + ++L F KE A+++F EM+ +GF S V++N I+GYCK G +A L
Sbjct: 730 DAFIYNVILNFCCKEEKFEKALDLF-QEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHL 787
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EEM +P+ T T+LI + +A++L+ EM +RN+ P Y +++
Sbjct: 788 LEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHN 847
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI------EGKF 383
+++ L +EM K I D +TY+ M + + CKL D ++ + F
Sbjct: 848 IGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGF 907
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T ++ + F + +D + ++ G+ + +L LV G + E++
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 967
Query: 444 CSKQM 448
KQM
Sbjct: 968 LLKQM 972
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 138/332 (41%), Gaps = 25/332 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++L+ ++ + EA +VF+ + F P+ + N LL + V + M
Sbjct: 157 FDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMC 216
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL-----------------PSL 282
P V TY I +CK G DA R+ EM A L P L
Sbjct: 217 AHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDL 276
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T LI+G + + +A+ + EM LKP+ YNA+I +R D+ A + DE
Sbjct: 277 YTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDE 336
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M I + + ++T+ G+ K+ +E ++ M+E P ++T +L++ C
Sbjct: 337 MVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQN 396
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+ L + R P +++ GLC G + ++M++ + + Y
Sbjct: 397 MARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT 456
Query: 463 LQRYLVQANANEKLEDLDRMI---KNLQAVLP 491
L+ A+A E + RMI Q +LP
Sbjct: 457 ----LMTAHAKEGRVEESRMILERMREQGILP 484
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 132/335 (39%), Gaps = 40/335 (11%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ +L+ + K E+ LE M + G+ S+ +++L++ C + M A +
Sbjct: 350 NTLLNGVCKAGKMEKALEIMQEMMEK---GVEP-DSQTYSLLIEGHCRGQNMARAFELLD 405
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R AP T ++++ G G++ EMV+ G +P+ V Y + + K+G
Sbjct: 406 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 465
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD----- 316
++ + E M LP + +LI G + + +AR EM +R L+P+
Sbjct: 466 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 525
Query: 317 ------------------------------IGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+G Y A+I + ++ A + + +
Sbjct: 526 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 585
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
R+ D TY + GL ++ + ++ + E +P T L+ C VD
Sbjct: 586 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 645
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L + +G P ++L+ GLC G E A
Sbjct: 646 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 680
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 54/241 (22%), Positives = 101/241 (41%), Gaps = 19/241 (7%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ V +++ +D Y K G +A+ +F + PSL + +L+ + ++
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
FD M + PD+ Y MIS+ + ++ A ++ EM E K
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE------------------K 253
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ L+ +L M++ VP T +L+ FC+ R + +ID G P
Sbjct: 254 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRMI 483
+ L+ G +G E+AF +M+ + + + L + +A EK LE + M+
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373
Query: 484 K 484
+
Sbjct: 374 E 374
>gi|357499719|ref|XP_003620148.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|217074978|gb|ACJ85849.1| unknown [Medicago truncatula]
gi|355495163|gb|AES76366.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 465
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 162/345 (46%), Gaps = 6/345 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A L + + R +P+ ++ I L + K + Y L +ME F GI+
Sbjct: 69 DDAVSLFNCLLRQNPTPPAIEFNKI-LGSLVKSKHYHTVLYLSKKME---FRGIKP-NLV 123
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
N+L+ FC + A SVF K+L + PN T L+ G G + F+ ++
Sbjct: 124 NCNILINCFCQLGLIPFAFSVFAKILKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKL 183
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V GF+ + ++Y IDG CK G A+ L ++ P++ +T+I G +++
Sbjct: 184 VALGFQFNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTIIDGMCKDKHV 243
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ A L+ EM + + P++ Y+A+IS L A++L ++M + I D T++ +
Sbjct: 244 NDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENIKPDVYTFNIL 303
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
KS + KL D M + P T ++ C RVD + L L D+G
Sbjct: 304 VDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVALLTKLKDQGI 363
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ H +L+ GLC+ G+ E+A + +LV+ ++ +Y ++
Sbjct: 364 RPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVM 408
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/210 (22%), Positives = 100/210 (47%), Gaps = 1/210 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C K + +A ++ +++S+ +PN T + L+ GF G + +++M+
Sbjct: 230 YSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMI 289
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P V T+NI +D +CK G A++L +EM P++ T ++++ +
Sbjct: 290 SENIKPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVD 349
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L ++ + ++P++ Y +I L L A + +++ K VTY MF
Sbjct: 350 KAVALLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMF 409
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+G K + L +M E +P +T
Sbjct: 410 YGFCKKGLFDEASALLSKMEENGCIPDAKT 439
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 124/283 (43%), Gaps = 2/283 (0%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNIL 218
+A + ++ + +G + F + L+ C E + A + ++ + PN + +
Sbjct: 175 QALNFHDKLVALGFQ-FNQISYGTLIDGLCKVGETRAALDLLRRVDGKLVQPNVVMYSTI 233
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + V Y EMV +G P+VVTY+ I G+ G DA+ LF +M
Sbjct: 234 IDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGKLKDAVDLFNKMISENI 293
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P + T L+ I A +L DEM R P+I Y++++ +L + ++ A+
Sbjct: 294 KPDVYTFNILVDVFCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKTHRVDKAVA 353
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L+ +++++ I + TY + GL S LE +++ ++ + T +++ FC
Sbjct: 354 LLTKLKDQGIRPNMHTYTILIDGLCTSGKLEDARNIFEDLLVKGYDITVVTYIVMFYGFC 413
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
D L + + G P +L+ L +G + A
Sbjct: 414 KKGLFDEASALLSKMEENGCIPDAKTYELIKLSLFKKGENDMA 456
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/190 (18%), Positives = 79/190 (41%), Gaps = 5/190 (2%)
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
++N H F+ +P + K ++ Y++ ++ D++ A+ L + + + +
Sbjct: 34 FLKNTH-----FNFIPCSSSKINLIPYSSTSTTFHSNNDVDDAVSLFNCLLRQNPTPPAI 88
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
++ + L+KS V L +M P +L+ FC + +++ +
Sbjct: 89 EFNKILGSLVKSKHYHTVLYLSKKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKI 148
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ G+ P+ L+ GLC +G+ +A +++ Q ++ SY L L +
Sbjct: 149 LKMGYNPNTITFTTLIKGLCLKGQIHQALNFHDKLVALGFQFNQISYGTLIDGLCKVGET 208
Query: 474 EKLEDLDRMI 483
DL R +
Sbjct: 209 RAALDLLRRV 218
>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Vitis vinifera]
Length = 1011
Score = 128 bits (322), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 155/306 (50%), Gaps = 3/306 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K M+EAR+ +++L R PN T + G+ ++G++ + +++EM+
Sbjct: 498 YNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V Y I+G+CK+G +A +F + L +QT + LIHG +H
Sbjct: 558 SCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMH 617
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F E+ ++ L P+ YN++IS + +++ A +L++EM K I D VTY+ +
Sbjct: 618 EAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILI 677
Query: 360 FGLMKSSGLEGVCKLYDRMIEGK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ +E L+D IEG+ P T ++ +C + L ++ RG
Sbjct: 678 DGLCKAGEIERAKNLFDD-IEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGV 736
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P ++++ C ++E+A + ++ML + + + +++ Y E
Sbjct: 737 PPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHL 796
Query: 479 LDRMIK 484
L+ MI+
Sbjct: 797 LEEMIE 802
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 139/304 (45%), Gaps = 5/304 (1%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ ++VL+ +M EA +F +L + PN T N L+ G + G+V E
Sbjct: 601 QTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEE 660
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M ++G P +VTYNI IDG CK G A LF+++E P+ T ++ G +N
Sbjct: 661 MCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKN 720
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A QL +EM R + PD YN +++ + A++L EM EK V+++T
Sbjct: 721 PTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNT 779
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G KS L+ L + MIE +F+P T L+ C + LW + +R
Sbjct: 780 LIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERN 839
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE-- 474
P L+ G + G E ++M+ + + + +Y M+ Y + N E
Sbjct: 840 VMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEAC 899
Query: 475 KLED 478
KL+D
Sbjct: 900 KLKD 903
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ FC +K +EA+ + ++++ P T N L+ GF GD+ EMV
Sbjct: 288 YDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 347
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +++ +N ++G CK G A+ + +EM P QT + LI G +N+
Sbjct: 348 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 407
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM KR L P + Y+ +I+ L RC +L ++ EM + + V Y T+
Sbjct: 408 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 467
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K +E + +RM E +P L+ FC R++ +++R
Sbjct: 468 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 527
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ H + G G E A +ML
Sbjct: 528 PNAHTYGAFIDGYSKAGEMEIADRYFNEML 557
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 130/268 (48%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+NV+L C +++ ++A +F ++L + + + N L+ G+ +SG + EM+
Sbjct: 743 YNVILNFCCKEEKFEKALDLFQEMLEKGFASTVSFNTLIEGYCKSGKLQEANHLLEEMIE 802
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+ F P+ VTY ID CK G G+A RL+ EM+ +P+ +T T+L+HG + N+ +
Sbjct: 803 KQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSE 862
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
LF+EM + ++PD Y MI + R ++ A +L DE+ K + Y +
Sbjct: 863 VSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQ 922
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K V KL + + E F T ++ + F + +D + ++ G+
Sbjct: 923 ALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVS 982
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ +L LV G + E++ KQM
Sbjct: 983 NTTSLGDLVDGNQNGANSEDSDNLLKQM 1010
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 131/281 (46%), Gaps = 1/281 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV++ C + + EA + ++ + P+ T +IL+ GF ++ EM+
Sbjct: 253 YNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMI 312
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +TYN IDG+ ++G A R+ +EM +L TL++G +
Sbjct: 313 DVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKME 372
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ EM ++ ++PD Y+ +I R +++ A EL+DEM+++++ +TY +
Sbjct: 373 KALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVII 432
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + L+G + M+ P LM RV+ + + ++G
Sbjct: 433 NGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
P + L+ G C R EEA +ML RR + + +Y
Sbjct: 493 PDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTY 533
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 109/492 (22%), Positives = 205/492 (41%), Gaps = 46/492 (9%)
Query: 27 TTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQ---TTPLSSTLVENVLGRLFAAHSNG 83
T + IT ++N H + Q L + +P+ T + S +++N +G +
Sbjct: 21 TQNEDSVREITTLLNSHNW--QALMES--SDIPKKLNTDIIRSVILQNQVG-------DP 69
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILA----RMRYFDQAWELMSHVQRTHPSLLTL 139
+ L FF ++ QH T T L LA ++ A +L+ + R S L +
Sbjct: 70 KRLLNFFYWS-QHKMGTSTAQQDLDVLSALAVNLCNSNWYGPASDLIKCIIRNSDSPLAV 128
Query: 140 KSMSIMLSRISKFQS----YEETLEAFDRM-----EREIFVGIRKFGSEEF-------NV 183
+ R ++ ++++ +M +F+G + F EF N
Sbjct: 129 LGSIVKCYRSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNF---EFRPSLLSCNS 185
Query: 184 LLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL +++ VF + + + P+ T ++ + G+V + EM +G
Sbjct: 186 LLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKG 245
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P++VTYN+ I G C+ +A+ L M +P L T LI+G + + +A+
Sbjct: 246 CSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAK 305
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ EM LKP+ YNA+I +R D+ A + DEM I + + ++T+ G+
Sbjct: 306 LMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGV 365
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K+ +E ++ M+E P ++T +L++ C + L + R P
Sbjct: 366 CKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTV 425
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
+++ GLC G + ++M++ + + Y L+ A+A E + RM
Sbjct: 426 LTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTT----LMTAHAKEGRVEESRM 481
Query: 483 I---KNLQAVLP 491
I Q +LP
Sbjct: 482 ILERMREQGILP 493
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 119/263 (45%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C +M++A + +++ + P+++T ++L+ G ++ EM
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+V+TY++ I+G C+ G + EM P+ TTL+ +
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++R + + M ++ + PD+ YN++I + + + A + EM E+R+ + TY
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ +E + ++ M+ +P L++ C V +++ +++ R
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
+L+ GL G+ EAF
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAF 620
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 157/367 (42%), Gaps = 10/367 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELM-SHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
+P + + L R R D+A EL S V + P L T + I+ F +
Sbjct: 247 SPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDIL------INGFCMEKR 300
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMN 216
+ EA + I VG++ +N L+ F Q ++++A + ++++ N N
Sbjct: 301 SREAKLMLLEMIDVGLKP-EPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWN 359
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G ++G + EM+ +G P TY++ I+G+C+ A L +EM++
Sbjct: 360 TLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKR 419
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P++ T + +I+G N+ + EM LKP+ Y ++++ + + +
Sbjct: 420 KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEES 479
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+++ M E+ I D Y+++ G K+ +E M+E + P T +
Sbjct: 480 RMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+ +++ + ++ G P+ L+ G C G EAF + +L RR
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599
Query: 457 EASYRML 463
+Y +L
Sbjct: 600 VQTYSVL 606
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/335 (20%), Positives = 132/335 (39%), Gaps = 40/335 (11%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ +L+ + K E+ LE M + G+ S+ +++L++ C + M A +
Sbjct: 359 NTLLNGVCKAGKMEKALEIMQEMMEK---GVEP-DSQTYSLLIEGHCRGQNMARAFELLD 414
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R AP T ++++ G G++ EMV+ G +P+ V Y + + K+G
Sbjct: 415 EMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEG 474
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD----- 316
++ + E M LP + +LI G + + +AR EM +R L+P+
Sbjct: 475 RVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYG 534
Query: 317 ------------------------------IGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+G Y A+I + ++ A + + +
Sbjct: 535 AFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSR 594
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
R+ D TY + GL ++ + ++ + E +P T L+ C VD
Sbjct: 595 RVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKA 654
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L + +G P ++L+ GLC G E A
Sbjct: 655 SQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERA 689
>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
Length = 586
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 166/384 (43%), Gaps = 13/384 (3%)
Query: 97 PHFTPTPDAFEKTLHILA-RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
PHF + T H + D A + + HP ++ + +L I+K + Y
Sbjct: 29 PHFLSSS---HNTFHSKSLNFNTLDDALSSFNRMLHMHPPP-SIADFTKLLISITKMKHY 84
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKT 214
L +M+ GI N+L+ +FC + + A SV K+L PN T
Sbjct: 85 STVLSLSHQMDS---FGIPP-NIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 140
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G G + + + +M+ GF+P+VVTY I+G CK G A+RL ME
Sbjct: 141 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 200
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ C P + T++I R + QA LF EM + + P I YN++I +L +
Sbjct: 201 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 260
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
L++EM +I + V + T+ L K + + D MI+ P T LM
Sbjct: 261 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 320
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C+ +D + ++ ++ +GF P + L+ G C R E+A ++M +
Sbjct: 321 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 380
Query: 455 VSEASYRMLQRYLVQANANEKLED 478
+ +Y L L +L+D
Sbjct: 381 PNTVTYSTLMHGLCHVG---RLQD 401
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 169/390 (43%), Gaps = 10/390 (2%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P + + L + R QA+ L S + Q PS+ T S+ L +
Sbjct: 198 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 257
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
+++ L + + +I + F + ++ A C + ++ EA V ++ R
Sbjct: 258 EWKHVTALLN--EMVNSKIMPNVVIFST-----VVDALCKEGKVMEAHDVVDMMIKRGVE 310
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T N L+ G ++ + MV +GF P VV+Y+ I+GYCK AM L
Sbjct: 311 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 370
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FEEM R +P+ T +TL+HG V + A LF EM R PD +Y ++ L +
Sbjct: 371 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 430
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
R L+ A+ L+ +E + D Y + G+ ++ LE L+ + P T
Sbjct: 431 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 490
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+++ C + L+G + +G+ P+G +L+ G + ++ML
Sbjct: 491 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 550
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDL 479
R ++ +L L ++ ++ +
Sbjct: 551 ARGFSADVSTSTVLVEMLSDDGLDQSVKQI 580
>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
Length = 727
Score = 128 bits (322), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 138/284 (48%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++++ A+ F ++ + P+ T N +L G+ ++G++ ++
Sbjct: 352 YNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLR 411
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYN IDGYC+ G +A RL EEM C P + T T L++G+ VRN+
Sbjct: 412 RAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLP 471
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+ FDEM + L+PD AYN I + + D + A +L + M K I D VTY+ +
Sbjct: 472 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVII 531
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ L +M+ P T L+ C + L ++ G
Sbjct: 532 DGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQ 591
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P +L+ C RG A+ ++ML + +E +Y +L
Sbjct: 592 PSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 635
Score = 75.5 bits (184), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 118/273 (43%), Gaps = 9/273 (3%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ + N +L +++ + Y EM+ P++VTYN +D + K+G +A
Sbjct: 205 APDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASM 264
Query: 269 LFEEMERV--ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
L +EME CL + T +I ++ A +L D M + + K YN +I++
Sbjct: 265 LLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSM-RLSKKASSFTYNPLITA 323
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L+ + L EME + I VTY+ + GL+KS +E + M +P
Sbjct: 324 LLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPD 383
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T ++ +C + L L G L G P + L+ G C G EEA +
Sbjct: 384 LITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKE 443
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+M V + + + Y + N + K+ +L
Sbjct: 444 EM------VEQGCFPDVCTYTILMNGSHKVRNL 470
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 85/196 (43%)
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V +L P+ T N+++ G ++G++ + +MV G +P +TY I +C++G
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A +L M PS+ T T LIH N++ A F +M ++P+ YN
Sbjct: 574 LLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 633
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I +L R A EM E+ + + TY + G + +LY M +
Sbjct: 634 VLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 693
Query: 382 KFVPKTRTVVMLMKFF 397
P T L K F
Sbjct: 694 GIPPDYCTHNALFKGF 709
>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
Length = 603
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 121/465 (26%), Positives = 192/465 (41%), Gaps = 33/465 (7%)
Query: 36 ITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ 95
I ++I D PD + T++ L ++ GR+ +AL F ++
Sbjct: 103 IKKMIEDGHVPDVVTYNTVMDGLCKS------------GRVE-------EALLLFN-EME 142
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ-RTHPSLLTLKSMSIMLSRISKFQS 154
TP + + L + DQA ++ ++ R P S I++ ++K
Sbjct: 143 RLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP--DSWSYGILIDGLAKAGK 200
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNK 213
E + F RM + GI + +NV++ C + EA +F + S+ P+
Sbjct: 201 LNEAYKLFRRM---LDSGITP-SAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRF 256
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T NIL+ + G + M G P VVTY+ I G C DA L E+M
Sbjct: 257 TFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDM 316
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ C P++ T TLIHG I +AR++ D M PD+ YN ++ R
Sbjct: 317 VKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQT 376
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A EL+ +M + + + VTY + GL K++ L C ++ +M P T L
Sbjct: 377 ERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTAL 436
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM--LVR 451
+ FC +VD GL L+G ++ G P L LC GR A E ++ +R
Sbjct: 437 ILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLR 496
Query: 452 RRQVSEASYRMLQRYLVQANANE-KLEDLDRMIKNLQAVLPPPTR 495
+ YR L+ A E L + M++ Q LP P R
Sbjct: 497 SEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQ--LPAPER 539
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 143/310 (46%), Gaps = 2/310 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C +AR +F + R P + T N+++ + G + +M+
Sbjct: 48 YTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VVTYN +DG CK G +A+ LF EMER+ C P+ ++ T+I G I
Sbjct: 108 EDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKID 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA Q+F EM R++ PD +Y +I L + LN A +L M + I VTY+ +
Sbjct: 168 QACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVI 227
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + L+ +L+ M P T +L+ C ++D L + D G
Sbjct: 228 HGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHV 287
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLED 478
P L++GLCS R ++A + M+ R+ + + + L L +A E E
Sbjct: 288 PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREV 347
Query: 479 LDRMIKNLQA 488
LD M+ + Q+
Sbjct: 348 LDAMVSSGQS 357
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 131/272 (48%), Gaps = 1/272 (0%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
S + +L+ ++ +AR +F KLL S P+ L+ G + +
Sbjct: 10 SWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFA 69
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M RG PS VTYN+ ID CK+G +A L ++M +P + T T++ G
Sbjct: 70 DMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSG 129
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A LF+EM + P+ ++N +I L + ++ A ++ EME + I D+ +Y
Sbjct: 130 RVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYG 189
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K+ L KL+ RM++ P T +++ C+ + +D L L+ + +
Sbjct: 190 ILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSK 249
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P ++L+ C RG+ +EAF K+M
Sbjct: 250 GCRPSRFTFNILIDAHCKRGKMDEAFRLLKRM 281
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 160/382 (41%), Gaps = 12/382 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H TP+ A+ +H L FD A EL + + R PS +T ++++ K
Sbjct: 36 LLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTY---NVIIDASCK 92
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-- 209
EE + +M + V +N ++ C ++EA +F ++ R
Sbjct: 93 RGMLEEACDLIKKMIEDGHV----PDVVTYNTVMDGLCKSGRVEEALLLFNEM-ERLGCT 147
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN ++ N ++LG + + +HEM R P +Y I IDG K G +A +L
Sbjct: 148 PNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKL 207
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F M PS T +IHG L + +A +LF M + +P +N +I + +
Sbjct: 208 FRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCK 267
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A L+ M + D VTY T+ GL + ++ L + M++ + P T
Sbjct: 268 RGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVT 327
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C R+ + ++ G P + LV G C G+ E A E M+
Sbjct: 328 QNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMV 387
Query: 450 VRRRQVSEASYRMLQRYLVQAN 471
R + +Y L L +AN
Sbjct: 388 ARGLAPNVVTYTALVSGLCKAN 409
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R P +Y I IDG K G DA LF+++ PS T+LIHG + +
Sbjct: 4 RNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDD 63
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+LF +M +R P YN +I + + L A +L+ +M E D VTY+T+
Sbjct: 64 ARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMD 123
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL KS +E L++ M P R+ ++ C ++D ++ + R P
Sbjct: 124 GLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPP 183
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ +L+ GL G+ EA++ ++ML S +Y ++
Sbjct: 184 DSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVV 226
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/135 (24%), Positives = 60/135 (44%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +RN+ PD +Y +I L + LN A +L ++ + V Y ++ GL ++
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ +L+ M P T +++ C ++ +L +I+ G P +
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120
Query: 428 LVTGLCSRGRWEEAF 442
++ GLC GR EEA
Sbjct: 121 VMDGLCKSGRVEEAL 135
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 47/107 (43%)
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M E+ + D+ +Y + GL K+ L L+ +++ P T L+ C+
Sbjct: 1 MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
D L+ + RG P ++++ C RG EEA + K+M+
Sbjct: 61 FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMI 107
>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 577
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 98/376 (26%), Positives = 162/376 (43%), Gaps = 10/376 (2%)
Query: 97 PHFTPTPDAFEKTLHILA-RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
PHF + T H + D A + + HP ++ + +L I+K + Y
Sbjct: 20 PHFLSSS---HNTFHSKSLNFNTLDDALSSFNRMLHMHPPP-SIADFTKLLISITKMKHY 75
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKT 214
L +M+ GI N+L+ +FC + + A SV K+L PN T
Sbjct: 76 STVLSLSHQMDS---FGIPP-NIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIAT 131
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G G + + + +M+ GF+P+VVTY I+G CK G A+RL ME
Sbjct: 132 FNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSME 191
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ C P + T++I R + QA LF EM + + P I YN++I +L +
Sbjct: 192 QGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWK 251
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
L++EM +I + V + T+ L K + + D MI+ P T LM
Sbjct: 252 HVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALM 311
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C+ +D + ++ ++ +GF P + L+ G C R E+A ++M +
Sbjct: 312 DGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELI 371
Query: 455 VSEASYRMLQRYLVQA 470
+ +Y L L
Sbjct: 372 PNTVTYSTLMHGLCHV 387
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/362 (24%), Positives = 159/362 (43%), Gaps = 10/362 (2%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P + + L + R QA+ L S + Q PS+ T S+ L +
Sbjct: 189 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 248
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
+++ L + + +I + F + ++ A C + ++ EA V ++ R
Sbjct: 249 EWKHVTALLN--EMVNSKIMPNVVIFST-----VVDALCKEGKVMEAHDVVDMMIKRGVE 301
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T N L+ G ++ + MV +GF P VV+Y+ I+GYCK AM L
Sbjct: 302 PNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYL 361
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
FEEM R +P+ T +TL+HG V + A LF EM R PD +Y ++ L +
Sbjct: 362 FEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCK 421
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
R L+ A+ L+ +E + D Y + G+ ++ LE L+ + P T
Sbjct: 422 NRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWT 481
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+++ C + L+G + +G+ P+G +L+ G + ++ML
Sbjct: 482 YTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEML 541
Query: 450 VR 451
R
Sbjct: 542 AR 543
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 147/317 (46%), Gaps = 4/317 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+ +AF+ I GI +N L+ A C E K ++ +++ S+ PN
Sbjct: 214 QVTQAFNLFSEMIHQGISP-SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIF 272
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ ++ + G V M+ RG P+VVTYN +DG+C + +A+++F+ M
Sbjct: 273 STVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVC 332
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + + +TLI+G ++ I +A LF+EM ++ L P+ Y+ ++ L L
Sbjct: 333 KGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQD 392
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLM 394
A+ L EM + D V+Y + L K+ L+ L + IEG + P + +++
Sbjct: 393 AIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDEAIALL-KAIEGSNMDPDIQIYTIVI 451
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ +L+ L +G P+ +++ GLC +G EA + +M +
Sbjct: 452 DGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYS 511
Query: 455 VSEASYRMLQRYLVQAN 471
+ +Y ++ R ++ N
Sbjct: 512 PNGCTYNLITRGFLRNN 528
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 84/345 (24%), Positives = 146/345 (42%), Gaps = 12/345 (3%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQ 153
H +P+ + +H L + + L++ + + P+++ ++ L + K
Sbjct: 227 HQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGK-- 284
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
+EA D ++ I G+ +N L+ C + EM EA VF ++ + FAP+
Sbjct: 285 ----VMEAHDVVDMMIKRGVEP-NVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDV 339
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ + L+ G+ + + + EM + P+ VTY+ + G C G DA+ LF E
Sbjct: 340 VSYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHE 399
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M +P + L+ R + +A L + N+ PDI Y +I + R +
Sbjct: 400 MVTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGE 459
Query: 333 LNAAMELMDEMEEKRIGHDNV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
L AA +L + K + H NV TY M GL + L KL+ M + P T
Sbjct: 460 LEAARDLFSNLSSKGL-HPNVWTYTIMINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYN 518
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
++ + F N G+ L ++ RGF +LV L G
Sbjct: 519 LITRGFLRNNETLRGIQLLQEMLARGFSADVSTSTVLVEMLSDDG 563
>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
Length = 530
Score = 128 bits (321), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 155/350 (44%), Gaps = 14/350 (4%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG- 177
D A + + HP T+ + +L+ I+K + Y L +M+ FG
Sbjct: 93 LDDALSSFNRMLHMHPPPSTV-DFTKLLTSIAKMKHYSTVLSLSTQMD--------SFGI 143
Query: 178 ---SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEM 233
N+L+ +FC + + A SV KLL P+N T N L+ G G +
Sbjct: 144 PPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALH 203
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ + + GF+P VVTY ++G CK G A+RL M + C P++ T+I
Sbjct: 204 LFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLC 263
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
R + +A LF EM + + PDI YN++I +L + L++EM +I + V
Sbjct: 264 KDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVV 323
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ T+ L K + + D MI+ P T LM C+ +D + ++ +
Sbjct: 324 VFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTM 383
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ +G P+ + ++L+ G C R ++A +QM ++ +Y L
Sbjct: 384 VHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTL 433
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 12/394 (3%)
Query: 80 HSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSL 136
H N L AL F L H H P+ F K L +A+M+++ L + + P +
Sbjct: 89 HFNTLDDALSSFNRML-HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 147
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
TL + I+ F AF + + + +G + + FN L++ C + ++ E
Sbjct: 148 YTLNIL------INSFCHLRRLGYAFSVLAKLLKLGCQP-DNTTFNTLIRGLCVEGKIGE 200
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A +F K + F P+ T L+ G + G+ +A MV + RP+V+ YN ID
Sbjct: 201 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 260
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
CK +A LF EM P + T +LIH + L +EM + P
Sbjct: 261 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 320
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ ++ ++ +L + + A +++D M ++ + D VTY + G S ++ K++
Sbjct: 321 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 380
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
D M+ VP R+ +L+ +C R+D + L + +G + L+ GLC
Sbjct: 381 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 440
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GR + A +M+ + +YR+L YL +
Sbjct: 441 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 474
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 128/266 (48%), Gaps = 9/266 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C +++ EA ++F +++++ +P+ T N L+ + + +EMV
Sbjct: 255 YNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMV 314
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+VV ++ +D CK+G A + + M + P + T T L+ G L +
Sbjct: 315 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 374
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++FD M + P++ +YN +I+ + + ++ AM L+++M + + D VTY+T+
Sbjct: 375 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 434
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW----GYLID 415
GL L+ L+ M+ +P T +L+ + C N + + L G +D
Sbjct: 435 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLD 494
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
+ A+D G+C G E A
Sbjct: 495 ADILVYNIAID----GMCRAGELEAA 516
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 118/281 (41%), Gaps = 10/281 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P A+ + L + R +A+ L S + + P + T S+ L + +++
Sbjct: 250 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 309
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L + + +I + F + ++ A C + + A V ++ R P+ T
Sbjct: 310 LN--EMVNSKIMPNVVVFST-----VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 362
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G ++ + MV +G P+V +YNI I+GYC+ AM L E+M
Sbjct: 363 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 422
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T TLIHG V + A LF EM PD+ Y ++ L + L AM
Sbjct: 423 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 482
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
L+ +E + D + Y+ G+ ++ LE L+ +
Sbjct: 483 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523
>gi|357491947|ref|XP_003616261.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355517596|gb|AES99219.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 811
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 122/468 (26%), Positives = 192/468 (41%), Gaps = 62/468 (13%)
Query: 34 ERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFT 93
E I I N++P PD L+PTL + LP L+S + N++ L L FF +
Sbjct: 34 ESINTIHNNNPNPDYSLNPTLKRILPS---LTSHHITNLI-NLNPLSLPPLSLFSFFNYL 89
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
P F TLH + M +F + L+S +TH L + S S S
Sbjct: 90 ASRP-------PFRHTLHNYSTMAHFLSSHNLLS---QTHSLFLFIISKMGHHSSTSLIS 139
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR------ 207
S +T+ R + V F+ L+ A+ T E E ++L+ +
Sbjct: 140 SLIQTVPTHHRHNHSVLV---------FDALIIAY-TDSEFIEDAIQCLRLVKKNNFSIP 189
Query: 208 --------------------------------FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ PN NIL+ GF + GDV M +
Sbjct: 190 VCGCDYLLRRVMKLNQQPGHCWEFYLEVLDYGYPPNVYLFNILMHGFCKIGDVMNARMVF 249
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
E+ RG RPSVV++N I GYC+ + L ME P + T + LI+G
Sbjct: 250 DEISRRGLRPSVVSFNTLISGYCRSKNVEEGFVLKSVMESERISPDVFTYSALINGLCKE 309
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A LFDEM + L P+ + +I + ++ A+ + M+++ I D +TY
Sbjct: 310 SRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITY 369
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL + L+ KL + MI F P T LM C + +D L + +++
Sbjct: 370 NALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVE 429
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G A L++GLC GR +A K ML + + +Y M+
Sbjct: 430 EGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMV 477
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 139/325 (42%), Gaps = 12/325 (3%)
Query: 121 QAWELMSHV-QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
WE V +P + L +I++ K FD + R G+R
Sbjct: 209 HCWEFYLEVLDYGYPPNVYL--FNILMHGFCKIGDVMNARMVFDEISRR---GLRP-SVV 262
Query: 180 EFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
FN L+ +C K ++E +SV R +P+ T + L+ G + V +
Sbjct: 263 SFNTLISGYCRSKNVEEGFVLKSVMES--ERISPDVFTYSALINGLCKESRVEEANGLFD 320
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM G P+ VT+ IDG CK G A+R FE M+ P L T LI+G
Sbjct: 321 EMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMKDRGIRPDLITYNALINGLCRDG 380
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ +AR+L +EM KPD + ++ + D+++A+E+ D M E+ I D+V +
Sbjct: 381 DLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMDSALEIKDRMVEEGIELDDVAFT 440
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL + + ++ M+ P T M++ FC V +G L +
Sbjct: 441 ALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVIDCFCKKGDVKMGAKLLKEMQRD 500
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEA 441
G P + L+ G C +G+ + A
Sbjct: 501 GRVPGVVTYNALMNGFCKQGQMKNA 525
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 111/257 (43%), Gaps = 1/257 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + ++EA +F ++ PN T L+ G + G + + M
Sbjct: 299 YSALINGLCKESRVEEANGLFDEMCEMGLVPNGVTFTTLIDGQCKHGKIDLALRNFEIMK 358
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG RP ++TYN I+G C+ G +A +L EM P T TTL+ G ++
Sbjct: 359 DRGIRPDLITYNALINGLCRDGDLKEARKLLNEMIGNGFKPDKITFTTLMDGCCKDGDMD 418
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ D M + ++ D A+ A+IS L R + A ++ +M D+ TY +
Sbjct: 419 SALEIKDRMVEEGIELDDVAFTALISGLCRDGRVRDAERMLKDMLSAGHKPDDPTYTMVI 478
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K ++ KL M VP T LM FC ++ L +++
Sbjct: 479 DCFCKKGDVKMGAKLLKEMQRDGRVPGVVTYNALMNGFCKQGQMKNAKMLLHAMLNMEVV 538
Query: 420 PHGHALDLLVTGLCSRG 436
P+ ++L+ G C G
Sbjct: 539 PNDITFNILLDGHCKHG 555
>gi|147767583|emb|CAN60200.1| hypothetical protein VITISV_039678 [Vitis vinifera]
Length = 525
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 112/470 (23%), Positives = 204/470 (43%), Gaps = 31/470 (6%)
Query: 18 DRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLF 77
D L+ + S + + I++I+ H P + +L + LS+ LV L RL
Sbjct: 38 DALSTGLPSLQPSYDADLISKILLQHHNPFHAMESSLQLN---GIALSTHLVHQTLLRL- 93
Query: 78 AAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPS 135
+ AL FF + H + ++ + ILA++R FD AW+ + + + P+
Sbjct: 94 --RNVSKIALSFFLWAKDQAHHSHDVVSYNLIIDILAKVRQFDVAWQFIIEMDQNSLEPT 151
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
T + I++ R + + AFD M FV + S++F LL +K
Sbjct: 152 STTFR---ILIRRSVSAGLTRQAVRAFDDMS--CFVE-KDADSDDFCYLLDTLSKYGYVK 205
Query: 196 EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A +F + +F N K IL+ G+ + V+ E EMV RG +VVTYN+ ++
Sbjct: 206 LASQIFNQRKFKFEANAKMYTILIYGWCKINRVSIAERLLGEMVERGJXANVVTYNVLLN 265
Query: 256 GYCKKGCFG----------DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
G C+ DA ++ +EM + P + + + +IH + H+
Sbjct: 266 GICRXASLHPDDRFERTIRDAEKVLDEMRQXGIEPDVTSYSIVIH---VYSRAHKPELTL 322
Query: 306 DE---MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
D+ M + + P + Y +++ L C L A EL+ +M + + TY+ F
Sbjct: 323 DKLRMMKDKGIWPTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEY 382
Query: 363 MKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ +LY +M E +P T +L+ F R+++ +W + G P
Sbjct: 383 RGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPD 442
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ LL+ GLC + +W+EA +M+ + + ++ L R L+Q++
Sbjct: 443 LDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSD 492
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 76/172 (44%), Gaps = 1/172 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P T ++ G + E +MV G PS TYN Y + +A+RL
Sbjct: 335 PTVATYTSVVKCLCSCGRLEDAEELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRL 394
Query: 270 FEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ +M E +CLP + T L+ + + ++++D+M PD+ +Y +I L
Sbjct: 395 YRKMKEEYSCLPDMHTYNILVGMFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLC 454
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ A EM EK +T+ T++ GL++S L+ +L ++ E
Sbjct: 455 EKQKWKEACHFFVEMIEKGYLPQKITFETLYRGLIQSDMLKTWRRLKKKLEE 506
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 47/223 (21%), Positives = 92/223 (41%), Gaps = 10/223 (4%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ S SI++ S+ E TL+ M ++ I+ + + S +++ C+ +++A
Sbjct: 302 VTSYSIVIHVYSRAHKPELTLDKLRMMKDKGIWPTVATYTS-----VVKCLCSCGRLEDA 356
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRID 255
+ ++ +P+ T N ++ D Y +M P + TYNI +
Sbjct: 357 EELVSDMVKDGVSPSAATYNCFFKEYRGRKDSDNALRLYRKMKEEYSCLPDMHTYNILVG 416
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
+ K ++++M+ P L + T LIHG + +A F EM ++ P
Sbjct: 417 MFVKLNRMEIVQEIWDDMKTSGAGPDLDSYTLLIHGLCEKQKWKEACHFFVEMIEKGYLP 476
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI--GHDNVTYH 356
+ + LI+ L L ++EE+ I G + YH
Sbjct: 477 QKITFETLYRGLIQSDMLKTWRRLKKKLEEESITFGSEFQXYH 519
>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
Length = 425
Score = 128 bits (321), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 88/332 (26%), Positives = 160/332 (48%), Gaps = 10/332 (3%)
Query: 120 DQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A+ L++ ++ + P +L ++ + + K++ ++ L F ME + GIR
Sbjct: 33 DLAFNLLNKMEQGKLEPGVLIYNTI---IDGLCKYKHMDDALNLFKEMETK---GIRP-N 85
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ C +A + ++ R P+ T + L+ F + G + E Y
Sbjct: 86 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 145
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV R PS+VTY+ I+G+C +A ++FE M C P + T TLI G +
Sbjct: 146 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 205
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + ++F EM +R L + YN +I L + D + A E+ EM + + +TY+
Sbjct: 206 RVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 265
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL K+ LE +++ + K P T ++++ C +V+ G +L+ L +
Sbjct: 266 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 325
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P A + +++G C +G EEA K+M
Sbjct: 326 GVKPDVVAYNTMISGFCRKGSKEEADALFKEM 357
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 135/298 (45%), Gaps = 17/298 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
F+ DAF K ++ + +D+ V+R+ PS++T S+ ++ +E
Sbjct: 124 FSALIDAFVKEGKLVEAEKLYDEM------VKRSIDPSIVTYSSL---INGFCMHDRLDE 174
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ F+ M + F + + N L++ FC K ++E VF ++ R N T
Sbjct: 175 AKQMFEFMVSKHCFPDVVTY-----NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 229
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ G ++GD + + EMV G P+++TYN +DG CK G AM +FE ++R
Sbjct: 230 NILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 289
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T +I G + LF + + +KPD+ AYN MIS R
Sbjct: 290 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 349
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A L EM+E ++ Y+T+ ++ E +L M F T+ ++
Sbjct: 350 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 115/234 (49%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV +G +P +VTY + ++G CK+G A L +ME+ P + T+I G ++
Sbjct: 7 MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF EM + ++P++ Y+++IS L + A L+ +M E++I D T+
Sbjct: 67 MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ +K L KLYD M++ P T L+ FC++ R+D ++ +++ +
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
P + L+ G C R EE E ++M R + +Y +L + L QA
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 131/285 (45%), Gaps = 3/285 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T +++ G + GD ++M P V+ YN IDG CK DA+ L
Sbjct: 14 PDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 73
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+EME P++ T ++LI A +L +M +R + PD+ ++A+I + ++
Sbjct: 74 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 133
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
L A +L DEM ++ I VTY ++ G L+ ++++ M+ P T
Sbjct: 134 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 193
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+K FC RV+ G+ ++ + RG + ++L+ GL G + A E K+M+
Sbjct: 194 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 253
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
+ +Y L L + N KLE + + LQ PT
Sbjct: 254 SDGVPPNIMTYNTLLDGLCK---NGKLEKAMVVFEYLQRSKMEPT 295
>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 533
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 171/359 (47%), Gaps = 11/359 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMS 143
L FFK ++ P + + +++ D+A+ + ++ P+L+T +
Sbjct: 2 GLRFFK-EMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMII 60
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
L R + + ET E M R+ +V +N L+ +C + +A + +
Sbjct: 61 NGLCRDGRLK---ETSEVLVEMSRKGYVP----DEVTYNTLVNGYCKEGNFHQALVLHAE 113
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ + +PN T L+ ++G++ F+ +M +RG P+ TY I+G+ ++G
Sbjct: 114 MVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGL 173
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A R+ EM R +PS+ T LI+G ++ + +A L +M + + PD+ +Y+
Sbjct: 174 LDEAYRVLNEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYST 233
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+IS R ++L+ A ++ EM K + D VTY ++ GL + L C ++ M+ K
Sbjct: 234 IISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIK 293
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T L+ +C ++ L+L +I +GF P ++L+ GL + R +EA
Sbjct: 294 LPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEA 352
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/323 (26%), Positives = 145/323 (44%), Gaps = 10/323 (3%)
Query: 181 FNVLLQAFCTQKEMKEA----RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+N ++ +C K EA RS+ +K L PN T N+++ G G +
Sbjct: 21 YNTMIDGYCKLKRTDEAFGFLRSMGLKGLE---PNLITFNMIINGLCRDGRLKETSEVLV 77
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM +G+ P VTYN ++GYCK+G F A+ L EM R P++ T T+LI+
Sbjct: 78 EMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAG 137
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+++A + FD+M R L P+ Y +I+ + L+ A +++EM VTY+
Sbjct: 138 NLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYN 197
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G +E L M+ +P + ++ F N +D + +I +
Sbjct: 198 ALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGK 257
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P L+ GLC + R EA + ++ML + E +Y ++ Y + + N+
Sbjct: 258 SVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKA 317
Query: 476 LEDLDRMIKNLQAVLPPPTRQQV 498
L D MI+ + LP V
Sbjct: 318 LHLHDEMIQ--KGFLPDAVTYNV 338
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 131/284 (46%), Gaps = 3/284 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T N ++ G+ + F M L+G P+++T+N+ I+G C+ G + +
Sbjct: 16 PNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGRLKETSEV 75
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EM R +P T TL++G N HQA L EM + L P++ Y ++I+S+ +
Sbjct: 76 LVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCK 135
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+LN AME D+M + + + TY T+ G + L+ ++ + M F+P T
Sbjct: 136 AGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVT 195
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ CV R++ + L ++ +G P + +++G + AF+ +M+
Sbjct: 196 YNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMI 255
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ +Y L + L + +L + M + + + PP
Sbjct: 256 GKSVLPDAVTYSSLIQGLCE---QRRLTEACDMFQEMLTIKLPP 296
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/371 (24%), Positives = 166/371 (44%), Gaps = 29/371 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
+ P + ++ + F QA L + + R P+++T S+ ++ + K +
Sbjct: 84 YVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSL---INSMCKAGNLN 140
Query: 157 ETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
+E FD+M +R E + ++ F Q + EA V ++ S F P+
Sbjct: 141 RAMEFFDQMH------VRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIV 194
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G G + +MV +G P VV+Y+ I G+ + A ++ EM
Sbjct: 195 TYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEM 254
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ LP T ++LI G R + +A +F EM L PD Y +I++ + DL
Sbjct: 255 IGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDL 314
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL---------------YDRM 378
N A+ L DEM +K D VTY+ + GL K + + +L Y+ +
Sbjct: 315 NKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTL 374
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
IE + ++ V L+K FC+ +D ++ +I++ P+ ++++ G C G
Sbjct: 375 IENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNV 434
Query: 439 EEAFECSKQML 449
+A++ K+M+
Sbjct: 435 LKAYKLYKEMV 445
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 82/183 (44%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+R F+EMER CLP++ T T+I G ++ +A M + L+P++ +N +I+
Sbjct: 2 GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L R L E++ EM K D VTY+T+ G K L+ M+ P
Sbjct: 62 GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T L+ C ++ + + + RG CP+ ++ G +G +EA+
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181
Query: 446 KQM 448
+M
Sbjct: 182 NEM 184
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/357 (23%), Positives = 146/357 (40%), Gaps = 82/357 (22%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
+A+EFF + P + ++ A+ D+A+ +++ + R+ PS++T ++
Sbjct: 141 RAMEFFD-QMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNAL 199
Query: 143 ---SIMLSRISK----------------FQSYEETLEAFDR---MEREIFVGIRKFGSE- 179
+L R+ + SY + F R ++R + + G
Sbjct: 200 INGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSV 259
Query: 180 -----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEM 233
++ L+Q C Q+ + EA +F ++L+ + P+ T L+ + + GD+
Sbjct: 260 LPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALH 319
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH--- 290
+ EM+ +GF P VTYN+ I+G K+ +A RL ++ +PS T TLI
Sbjct: 320 LHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCC 379
Query: 291 ------GAGLVRN------IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
LV+ + +A Q+F+ M +N KP+ YN +I CR
Sbjct: 380 NIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHG--HCR------- 430
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
IG+ Y KLY M+ FVP T TV+ L+K
Sbjct: 431 ---------IGNVLKAY-----------------KLYKEMVHVDFVPHTVTVLALVK 461
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/167 (22%), Positives = 66/167 (39%)
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ F EM + P++ YN MI + + + A + M K + + +T++ + GL
Sbjct: 4 RFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGL 63
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ L+ ++ M +VP T L+ +C L L ++ G P+
Sbjct: 64 CRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNV 123
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
L+ +C G A E QM VR +E +Y + Q
Sbjct: 124 VTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQ 170
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 55/137 (40%), Gaps = 1/137 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ FC + M EA VF ++++ PN N+++ G G+V Y EMV
Sbjct: 389 LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVD 448
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VT + +G G+ + ++ R L + L+ N+
Sbjct: 449 FVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGNMDMVF 508
Query: 303 QLFDEMPKRNLKPDIGA 319
L EM K L P G
Sbjct: 509 NLLTEMAKDGLIPSTGT 525
>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 686
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 96/375 (25%), Positives = 161/375 (42%), Gaps = 37/375 (9%)
Query: 97 PHFTPTPDA---FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
PHF DA F + LH+ HP T+ + +L+ I+K +
Sbjct: 126 PHFNTLDDALSSFNRMLHM--------------------HPPPSTV-DFTKLLTSIAKMK 164
Query: 154 SYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
Y L +M+ FG N+L+ +FC + + A SV KLL
Sbjct: 165 HYSTVLSLSTQMD--------SFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGC 216
Query: 210 -PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+N T N L+ G G + + + + GF+P VVTY ++G CK G A+R
Sbjct: 217 QPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 276
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L M + C P++ T+I R + +A LF EM + + PDI YN++I +L
Sbjct: 277 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 336
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ L++EM +I + V + T+ L K + + D MI+ P
Sbjct: 337 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 396
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T LM C+ +D + ++ ++ +G P+ + ++L+ G C R ++A +QM
Sbjct: 397 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 456
Query: 449 LVRRRQVSEASYRML 463
++ +Y L
Sbjct: 457 SLQGLIADTVTYNTL 471
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 175/394 (44%), Gaps = 12/394 (3%)
Query: 80 HSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSL 136
H N L AL F L H H P+ F K L +A+M+++ L + + P +
Sbjct: 127 HFNTLDDALSSFNRML-HMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDV 185
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
TL + I+ F AF + + + +G + + FN L++ C + ++ E
Sbjct: 186 YTLNIL------INSFCHLRRLGYAFSVLAKLLKLGCQP-DNTTFNTLIRGLCVEGKIGE 238
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A +F K + F P+ T L+ G + G+ +A MV + RP+V+ YN ID
Sbjct: 239 ALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIID 298
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
CK +A LF EM P + T +LIH + L +EM + P
Sbjct: 299 SLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMP 358
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ ++ ++ +L + + A +++D M ++ + D VTY + G S ++ K++
Sbjct: 359 NVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVF 418
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
D M+ VP R+ +L+ +C R+D + L + +G + L+ GLC
Sbjct: 419 DTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHV 478
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GR + A +M+ + +YR+L YL +
Sbjct: 479 GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 512
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/382 (21%), Positives = 152/382 (39%), Gaps = 10/382 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P A+ + L + R +A+ L S + + P + T S+ L + +++
Sbjct: 288 PNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTL 347
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L + + +I + F + ++ A C + + A V ++ R P+ T
Sbjct: 348 LN--EMVNSKIMPNVVVFST-----VVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 400
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G ++ + MV +G P+V +YNI I+GYC+ AM L E+M
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 460
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T TLIHG V + A LF EM PD+ Y ++ L + L AM
Sbjct: 461 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 520
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ +E + D + Y+ G+ ++ LE L+ + P RT +++
Sbjct: 521 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 580
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C +D L+ + + G G + ++ G A + ++ML
Sbjct: 581 CKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADV 640
Query: 458 ASYRMLQRYLVQANANEKLEDL 479
++ ++ L ++ E L
Sbjct: 641 STTTLIVEMLSDDGLDQSFERL 662
>gi|357442883|ref|XP_003591719.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|357501105|ref|XP_003620841.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480767|gb|AES61970.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495856|gb|AES77059.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 524
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 196/444 (44%), Gaps = 30/444 (6%)
Query: 65 SSTLVE--NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
S +++E +LG L +++N LQ TP+ F ++ + D A
Sbjct: 43 SPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVTFNTVINCYCHLGEMDFA 102
Query: 123 WELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ +++ + + HP +TL ++ L K EA + I G R
Sbjct: 103 FSVLAKILKMGYHPDTITLTTLIKGLCLNGKVH------EALHFHDHVIARGFR-LNEVS 155
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C E + A V K+ + N M + ++ + VT Y +M+
Sbjct: 156 YGILINGLCKMGETRAALQVLRKIDGKLVNTNVVMYSTIIDSLCKEKLVTEAYELYSQMI 215
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
++ P VVT++ I G+C G F +A LF EM P + T L+
Sbjct: 216 VKKVSPDVVTFSALIYGFCMVGQFKEAFGLFHEMVLTNINPDVCTFNILVDALCKEGSTK 275
Query: 292 ------AGLVRNIHQ---ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
A +++ ++Q A+ +F+ + KR + PD+ +Y +I L + + ++ A+ L +E
Sbjct: 276 ETKNVLAVMMKEVNQVNKAKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNE 335
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M K I D VTY ++ GL KS + +L D+M T + C N +
Sbjct: 336 MRCKGITPDKVTYSSLIDGLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQ 395
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR- 461
VD + L + D+G P+ + ++L+ GLC GR+E A + +L++ +V+ +Y
Sbjct: 396 VDKAVALVKKIKDQGIQPNINTYNILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNI 455
Query: 462 MLQRYLVQANANEKLEDLDRMIKN 485
M+ ++ +E + L++M N
Sbjct: 456 MINGLCLEGLFDEAMTLLEKMEDN 479
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/371 (22%), Positives = 150/371 (40%), Gaps = 61/371 (16%)
Query: 113 LARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L + + +A+EL S V++ P ++T ++ + +F+ EAF +
Sbjct: 198 LCKEKLVTEAYELYSQMIVKKVSPDVVTFSALIYGFCMVGQFK------EAFGLFHEMVL 251
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA 230
I FN+L+ A C + KE T N+L + KE V
Sbjct: 252 TNINP-DVCTFNILVDALCKEGSTKE-----------------TKNVLAVMMKEVNQVNK 293
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ ++ + R P V +Y I I CK +A+ LF EM P T ++LI
Sbjct: 294 AKHVFNIIGKRRVTPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSLID 353
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G I A +L D+M R D+ Y + + +L + ++ A+ L+ +++++ I
Sbjct: 354 GLCKSERISHAWELLDQMHARGQPADVITYTSFLHALCKNHQVDKAVALVKKIKDQGIQP 413
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ TY+ + ++G+CK EG+F V+ ++V +W
Sbjct: 414 NINTYNIL---------IDGLCK------EGRF---ENAQVIFQDLLIKGYKV----TVW 451
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
Y ++++ GLC G ++EA ++M +Y + R L +
Sbjct: 452 TY-------------NIMINGLCLEGLFDEAMTLLEKMEDNGCTPDVVTYETIIRALFKN 498
Query: 471 NANEKLEDLDR 481
+ N K E L R
Sbjct: 499 DENHKAEKLLR 509
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 14/218 (6%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPD T+ I L +++ D+A L + + + P +T S+ + + K +
Sbjct: 307 TPDVHSYTIIIKRLCKIKMVDEALSLFNEMRCKGITPDKVTYSSL---IDGLCKSERISH 363
Query: 158 TLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E D+M R + + S L A C ++ +A ++ K+ + PN T
Sbjct: 364 AWELLDQMHARGQPADVITYTS-----FLHALCKNHQVDKAVALVKKIKDQGIQPNINTY 418
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ G + G ++ + +++++G++ +V TYNI I+G C +G F +AM L E+ME
Sbjct: 419 NILIDGLCKEGRFENAQVIFQDLLIKGYKVTVWTYNIMINGLCLEGLFDEAMTLLEKMED 478
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C P + T T+I H+A +L EM R L
Sbjct: 479 NGCTPDVVTYETIIRALFKNDENHKAEKLLREMIARGL 516
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 74/154 (48%), Gaps = 2/154 (1%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN--AAMELMDEMEEKRIGHDNVT 354
++H A F M + N P I +N ++ SL++ + N A+ L ++ I VT
Sbjct: 26 DVHDAISSFYRMLRMNPSPSIIEFNKILGSLVKSNNNNYPIAISLYHRLQLNAITPSIVT 85
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++T+ ++ + ++++ + P T T+ L+K C+N +V L+ ++I
Sbjct: 86 FNTVINCYCHLGEMDFAFSVLAKILKMGYHPDTITLTTLIKGLCLNGKVHEALHFHDHVI 145
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
RGF + + +L+ GLC G A + +++
Sbjct: 146 ARGFRLNEVSYGILINGLCKMGETRAALQVLRKI 179
>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
Length = 617
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 5/326 (1%)
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L I+K + Y + ++M+ G+ NVL+ C + A SV K+
Sbjct: 103 LGSIAKKKQYSSAVSLCNQMD---LFGVTH-NVYSLNVLINCLCRLSHVDFAVSVMGKMF 158
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ T N L+ G G + ++EMV G P+V++YN I+G CK G
Sbjct: 159 KLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTI 218
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+R+F +ME+ P++ T T+I R +++A + EM R + PD+ YN ++
Sbjct: 219 MAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTIL 278
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
LN A L EM + + D VT++ + GL K + + + M E
Sbjct: 279 HGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAE 338
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T LM +C++ ++D + + G +I +G P+ + ++L+ G C R EA
Sbjct: 339 PNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRL 398
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
+M + +Y L + L Q
Sbjct: 399 LSEMSEKNLTPDTVTYSTLMQGLCQV 424
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 144/305 (47%), Gaps = 2/305 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L FC+ ++ EA +F +++ R P+ T NIL+ G + G V+ M
Sbjct: 274 YNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMT 333
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TYN +DGYC +A+++ M C P+L + LI+G + ++
Sbjct: 334 EKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMN 393
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A++L EM ++NL PD Y+ ++ L + A+ L EM + D + Y +
Sbjct: 394 EAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILL 453
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K L+ KL M E + P +L++ + ++++ L+ L G
Sbjct: 454 DGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIR 513
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P ++++ GL G +EA+E ++M SY ++Q +L +++ ++
Sbjct: 514 PDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQL 573
Query: 479 LDRMI 483
+D M+
Sbjct: 574 IDEMV 578
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 187/439 (42%), Gaps = 52/439 (11%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ---RTHPSLLTLKSMSIM 145
F++ +P P+ F K L +A+ + + A L + + TH + S++++
Sbjct: 84 FYRMVRMNPR--PSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTH----NVYSLNVL 137
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
++ + + + + +M + +GI+ + FN L+ C + ++KEA +F +++
Sbjct: 138 INCLCRLSHVDFAVSVMGKMFK---LGIQP-DAITFNTLINGLCNEGKIKEAVGLFNEMV 193
Query: 206 -SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
S PN + N ++ G ++G+ + +M +P+VVTYN ID CK
Sbjct: 194 WSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVN 253
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ EM P + T T++HG + +++A +LF EM RN+ PD +N ++
Sbjct: 254 EAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILV 313
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF---------------FGLMKSSG-- 367
L + ++ A + + M EK + TY+ + G+M G
Sbjct: 314 DGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCA 373
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ G CK L M E P T T LM+ C R LNL
Sbjct: 374 PNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNL 433
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + G P A +L+ G C G +EA + K+M RR + + Y +L R +
Sbjct: 434 FKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFI 493
Query: 470 ANANEKLEDLDRMIKNLQA 488
A KLE + L A
Sbjct: 494 AG---KLEVAKELFSKLSA 509
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 107/217 (49%), Gaps = 1/217 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ +C K M EA+ + ++ + P+ T + L+ G + G + EM
Sbjct: 379 YNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMC 438
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++ Y+I +DG+CK G +A++L +EM P++ T LI G + +
Sbjct: 439 SSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLE 498
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF ++ ++PDI YN MI L++ + A E +ME+ D+ +Y+ +
Sbjct: 499 VAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVII 558
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
G +++ +L D M+ +F + T ML+
Sbjct: 559 QGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLLDL 595
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 117/250 (46%), Gaps = 1/250 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C +M EA V ++ + APN + NIL+ G+ +S + + EM
Sbjct: 344 YNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMS 403
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VTY+ + G C+ G +A+ LF+EM LP L + L+ G ++
Sbjct: 404 EKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLD 463
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L EM +R +KP+I Y +I + L A EL ++ I D TY+ M
Sbjct: 464 EALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMI 523
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+K + + + +M + F+P + + ++++ F N + L ++ + F
Sbjct: 524 KGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKRFS 583
Query: 420 PHGHALDLLV 429
+L+
Sbjct: 584 ADSSTFQMLL 593
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/234 (20%), Positives = 94/234 (40%), Gaps = 35/234 (14%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ F M R+ PS+ + + A L ++M + ++ + N +I
Sbjct: 79 DALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLI 138
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL---------------MKSSG-- 367
+ L R ++ A+ +M +M + I D +T++T+ GL M SG
Sbjct: 139 NCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHE 198
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ G+CK ++ +M + + P T ++ C + V+ +
Sbjct: 199 PNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEF 258
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++DRG P + ++ G CS G+ EA K+M+ R ++ +L
Sbjct: 259 LSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNIL 312
>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Glycine max]
Length = 687
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 136/272 (50%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L +FC + ++EA + ++ + +PN+ T N+L+ G SG++ + +M+
Sbjct: 205 YNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDML 264
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G SV TY+ I GYC+KG +A RL EEM +P++ T T+++G +
Sbjct: 265 RLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVS 324
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+L D M +NL PD+ +YN +I R ++ A L E+ + + VTY+T+
Sbjct: 325 DARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLI 384
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + L+ +L D MI+ P T ++ FC + + L+ +++RG
Sbjct: 385 DGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQ 444
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P A + G G +AF ++ML R
Sbjct: 445 PDRFAYITRIVGELKLGDPSKAFGMQEEMLAR 476
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/358 (23%), Positives = 145/358 (40%), Gaps = 71/358 (19%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C + +AR + ++++ P+ + N L+ G+ G++ + + E+
Sbjct: 310 YNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 369
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R PSVVTYN IDG C+ G AMRL +EM + P + T TT + G + N+
Sbjct: 370 YRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLP 429
Query: 300 QARQLFDEMPKRNLKPD--------IG---------------------------AYNAMI 324
A++LFDEM R L+PD +G YN I
Sbjct: 430 MAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFI 489
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + +L A EL+ +M + D+VTY ++ + + L L+ M+
Sbjct: 490 DGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIF 549
Query: 385 PKTRTVVMLMKFFCVNFRVDLGL-----------------------------------NL 409
P T +L+ + V R+ L + N
Sbjct: 550 PSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNF 609
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ + +G P+ + +L+ C+ G W+EA K ML R Q ++R L ++L
Sbjct: 610 FAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHL 667
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 91/203 (44%), Gaps = 1/203 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV + +KEA + K+L + P++ T ++ +G + + EM+
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSVVTY + I Y +G A+ F EM P++ T LI+G VR +
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA F EM + + P+ Y +I+ A+ L +M ++ I D+ T+ ++
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664
Query: 360 FGLMKSSGLEGVCKLYDRMIEGK 382
L K L V L + + G+
Sbjct: 665 KHLNKDYKLHVVRHLENVIAAGE 687
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/380 (21%), Positives = 141/380 (37%), Gaps = 62/380 (16%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL FF++ + F + ++ L ILAR A+ +M V S+ +
Sbjct: 64 ALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKVV----------SVKME 113
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
I S E ++ + + ++LL + + +++ VF K++
Sbjct: 114 NGVIDVVSSSEVSMPSVKLI---------------LDLLLWIYVKKSLLEKCLLVFYKMV 158
Query: 206 SR-FAPNNKTMN-ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
S+ P+ K N +L L ++ Y+ MV G P+VVTYN +D +CKKG
Sbjct: 159 SKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGM- 217
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+ +A QL +M P+ YN +
Sbjct: 218 ----------------------------------VQEALQLLFQMQAMGCSPNDVTYNVL 243
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
++ L ++ A EL+ +M + TY + G + +E +L + M+
Sbjct: 244 VNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGA 303
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
VP T +M C RV L ++++ P + + L+ G G EAF
Sbjct: 304 VPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFL 363
Query: 444 CSKQMLVRRRQVSEASYRML 463
++ R S +Y L
Sbjct: 364 LFAELRYRSLAPSVVTYNTL 383
>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 680
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 151/307 (49%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ + C K + +A ++ +++SR + N T + L+ GF G + +++M
Sbjct: 213 YSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMT 272
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V T+NI +D +CK+G +A M + P + T +L+ G LV ++
Sbjct: 273 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVN 332
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ + + M R + + +YN +I+ + + ++ AM+L EM K+I + +TY+++
Sbjct: 333 MAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLI 392
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L D M + P T ++ C N VD + L L D+G
Sbjct: 393 DGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIR 452
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ + +L+ GLC GR E+A + +LV+ ++ +Y M+Q + +E L
Sbjct: 453 PNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSL 512
Query: 479 LDRMIKN 485
L +M N
Sbjct: 513 LSKMKDN 519
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 137/272 (50%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ AFC + +KEA++ ++ + P+ T N L+ G+ +V + + M
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +V +YNI I+G+CK AM+LF+EM P++ T +LI G I
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L D M R +PDI Y++++ +L + ++ A+ L+ +++++ I + TY +
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILI 462
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K LE +++ ++ + T ++++ FC + D L+L + D
Sbjct: 463 DGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCI 522
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P ++++ L + ++A + ++M+ R
Sbjct: 523 PDAITYEIIICSLFDKDENDKAEKLLREMITR 554
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L + K + Y L F +ME + GI+ FN+L+ FC + A SV K+
Sbjct: 76 ILGSLVKSKHYHTVLSLFQKME---YRGIKP-NFVNFNILINCFCQLGLIPFAFSVLAKI 131
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L + P+ T+N + GF G + F+ ++V GF V+Y I+G CK G
Sbjct: 132 LKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGET 191
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+ L ++ + +T+I +N++ A L+ EM R + +I Y+A+
Sbjct: 192 RAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSAL 251
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
IS L A+ L ++M + I D T++ + K ++ M++
Sbjct: 252 ISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGI 311
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM +C+ V++ ++ + RG + ++++ G C ++A +
Sbjct: 312 KPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMK 371
Query: 444 CSKQM 448
K+M
Sbjct: 372 LFKEM 376
>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
Length = 948
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 151/343 (44%), Gaps = 38/343 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK--LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ + +EA+ + K +++ F P+ T NI++ G + G + + F EM
Sbjct: 339 YNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEM 398
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCF----------------------------------- 263
V +GF P+V+TY I IDG+CK+G F
Sbjct: 399 VKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKI 458
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA++++ EM C P + T +LI+G + +A L+ +M + + YN +
Sbjct: 459 QDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTL 518
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + +R + A +L+ EM + DN+TY+ + L K+ E L ++M +
Sbjct: 519 IHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEI 578
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P + +L+ FC +V+ L +I RG P + L+ GLC GR++EA
Sbjct: 579 FPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALN 638
Query: 444 CSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ + +Y ++ RY + N+ + L + + N
Sbjct: 639 LFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSN 681
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 143/338 (42%), Gaps = 15/338 (4%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
+ ALEF + F P + + + +F++A ++++ + SL T+ +
Sbjct: 389 VSALEFLD-EMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTV-GYN 446
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K ++ L+ + M + G + FN L+ C +M+EA ++
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSK---GCKP-DIYTFNSLIYGLCKNDKMEEALGLYRD 502
Query: 204 -LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
LL N T N L+ F + + EM RG +TYN I CK G
Sbjct: 503 MLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGA 562
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+ L E+M PS+ + LI+ ++ A Q +M +R L PDI YN+
Sbjct: 563 TEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNS 622
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ L + A+ L + ++ K I D VTY+T+ C+L + +
Sbjct: 623 LINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNG 682
Query: 383 FVPKTRTVVMLMKFFCVN------FRVDLGLNLWGYLI 414
F+P T +L+ +F N F + +G WG+ +
Sbjct: 683 FIPNEITWSILINYFVKNNSDSEQFTILMG--NWGFWL 718
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 133/306 (43%), Gaps = 9/306 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +NV+L+ K A +VF +LSR +P T +++ F +V + +
Sbjct: 166 KSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRD 225
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ + Y + I + +AM+L EEM + C P +QT +IHG
Sbjct: 226 MTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGR 285
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
IH+A +L D M R+ D ++ L R ++ A ++ ++ + V Y+T
Sbjct: 286 IHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPNP----NTVLYNT 341
Query: 358 MFFGLMKSSGLEGVCK-LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + S E LY M+ F P T +++ C + L ++ +
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
GF P+ +L+ G C +G +EEA + M + ++ Y L L + + K+
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCK---DGKI 458
Query: 477 EDLDRM 482
+D +M
Sbjct: 459 QDALQM 464
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 107/249 (42%), Gaps = 16/249 (6%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P+ +YN+ ++ C A +F +M P++ T ++ +V + A
Sbjct: 161 FEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSAC 220
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L +M K P+ Y +I +L +N AM+L++EM D T++ + GL
Sbjct: 221 SLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGL 280
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K+ + KL+DRM+ F LM C +VD + + + P+
Sbjct: 281 CKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAMLSKIPN----PNT 336
Query: 423 HALDLLVTGLCSRGRWEEAFE-CSKQMLVRRRQVSEASYRML------QRYLVQANANEK 475
+ L+ G GR+EEA + K M++ + ++ ++ + YLV A
Sbjct: 337 VLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSA----- 391
Query: 476 LEDLDRMIK 484
LE LD M+K
Sbjct: 392 LEFLDEMVK 400
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/245 (23%), Positives = 98/245 (40%), Gaps = 9/245 (3%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL--PSLQTIT 286
T+M++F + RG+ S Y + ID G F +L ++M+ C+ SL +
Sbjct: 76 TSMDLFEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILI 135
Query: 287 TLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+G AGL R L D +P +YN ++ L+ A + +M
Sbjct: 136 MRYYGKAGLPG--QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLS 193
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ I T+ + + ++ C L M + VP + ML+ N RV+
Sbjct: 194 RGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNE 253
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ L + G P + ++ GLC GR EA + +ML+R ++Q
Sbjct: 254 AMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADA----LIQG 309
Query: 466 YLVQA 470
YL+
Sbjct: 310 YLMHG 314
>gi|357508583|ref|XP_003624580.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355499595|gb|AES80798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 585
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/406 (26%), Positives = 185/406 (45%), Gaps = 13/406 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS LV VL R+ ++ A FF + + P + + + + +L +MR FD AW
Sbjct: 130 SSELVVEVLSRV---RNDWEAAFTFFLWAGKQPGYDHSVREYHSMISVLGKMRRFDTAWA 186
Query: 125 LMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
L+ ++R T S++T +++ IM+ + + F +R F + G EF
Sbjct: 187 LVEEMRRGKTGESIVTPQTLLIMIRKYCAVHDVGRAINTFYAFKRFNF----QVGLYEFQ 242
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKE-SGDVTAMEMFYHEMVLR 241
LL A C K +++A + + F + K+ NI+L G+ E + EM R
Sbjct: 243 GLLSALCRYKNVQDAEHLLFCNKNVFPLDTKSFNIILNGWCNLIVSARNAERIWEEMSKR 302
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
+ VV+Y I Y K ++LFE+M++ P + +I R + +A
Sbjct: 303 RIQHDVVSYASIISCYSKSSKLYRVLQLFEQMKKRNITPDRKVYNAVIFSLAKNRMVKEA 362
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L +M N+ PD YN++I L + R ++ A E+ + M E+ I T+H FF
Sbjct: 363 VNLIIKMEDNNVTPDAITYNSLIKPLCKARKIDEAKEIFNVMLERGISPSIRTFHA-FFR 421
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+++ E V +L D+M E P T +ML++ FC ++D +W + + G
Sbjct: 422 ILRVK--EEVFELLDKMKELGCNPTIETYIMLIRKFCRWRQLDEVKRIWNAMREDGIGHD 479
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ +L+ GL + EEA++ +M + + MLQ +L
Sbjct: 480 RSSYIVLIHGLFLNCKVEEAYKYYIEMQEKGFLPEPKTESMLQAWL 525
>gi|356540343|ref|XP_003538649.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22670,
mitochondrial-like [Glycine max]
Length = 543
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 193/420 (45%), Gaps = 10/420 (2%)
Query: 32 EIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFK 91
E++ IT+++ +P L L L + SS LV VL R ++ + AL FFK
Sbjct: 93 ELDAITKVLKKR-YPSPELAALALDGL--SFQPSSGLVSQVLNRF---SNDWVPALGFFK 146
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
+ + +P+ + IL + + FD +L+ + + +TL++M+ ++ R++K
Sbjct: 147 WAKSQTGYRHSPELCNLMVDILGKCKSFDPMSDLVEEMAKLEQGYVTLETMAKVIRRLAK 206
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ +E+ +EAF RM++ G+ K + NVL+ A ++ A V ++ +
Sbjct: 207 ARKHEDAIEAFRRMDK---FGVNK-DTAALNVLIDALVKGDSVEHAHKVVLEFKGLIPLS 262
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+ + N+L+ G+ + +M GF P V +Y I+ YC + F ++ E
Sbjct: 263 SHSFNVLMHGWCRARKFDNARKAMEDMKELGFEPDVFSYTSFIEAYCHERDFRKVDQVLE 322
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM C P+ T TT++ G + +A +++++M D Y+ MI L +
Sbjct: 323 EMRENGCPPNAVTYTTVMLHLGKAGQLSKALEVYEKMKCDGCVADTPVYSCMIFILGKAG 382
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
L A ++ ++M ++ + D VTY+TM S E +L M +G P T
Sbjct: 383 RLKDACDVFEDMPKQGVVRDVVTYNTMISTACAHSREETALRLLKEMEDGSCKPNVGTYH 442
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+K C R+ + L ++ P LLV LC G+ +A+ ++M+++
Sbjct: 443 PLLKMCCKKKRMKVLKFLLDHMFKNDISPDLATYSLLVNALCKTGKVADAYSFLEEMVLK 502
>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
Length = 722
Score = 127 bits (319), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 136/290 (46%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +++ A+ FV++ + P+ T N LL G+ ++G + + + ++
Sbjct: 346 YNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLR 405
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNI IDGYC+ G +A RL EEM CLP + T T L+ G+ ++
Sbjct: 406 HAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLA 465
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+ FDEM + L+PD AYN I + + + A L + M + I D VTY+ +
Sbjct: 466 MAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILI 525
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L L +M+ P T L+ C + + +I G
Sbjct: 526 DGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLA 585
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P + + C RG A+ ++ML + +E +Y +L L +
Sbjct: 586 PSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCR 635
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 121/270 (44%), Gaps = 4/270 (1%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S F ++ S AP+ K N +L ++ + + EM+ G PS+VTYN +D +
Sbjct: 188 SAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSF 247
Query: 258 CKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
K+G L +EME CLP+ T +I G ++ +A ++ + M + + K
Sbjct: 248 LKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGM-RLSKKA 306
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
YN +I+ L+ + A +L EME + I VTY+ M GL++S +E +
Sbjct: 307 SSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKF 366
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M P T L+ +C + L L+G L G P ++L+ G C
Sbjct: 367 VEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRL 426
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
G EEA ++M+ + +Y +L +
Sbjct: 427 GDLEEARRLKEEMVEQGCLPDVCTYTILMK 456
>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
Length = 735
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 38/356 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C EM+ A VF + +R +PN +T L+ G +SG V + + MV
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-------------- 285
G P+VVTY I G C +G A RL ME +P+ T
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 286 ---------------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
T+LI G I A +L +M PD +Y+++I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L R + L+ A ++++M EK I VTY + L++ G EG K++D+MI
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T + ++ +C R++ ++ ++DRG P+ + L+ G + G +AF
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM--IKNLQAVLPPPTRQQV 498
+ M+ + + +E SY +L R +V+ ++++ D+ ++ +K+LQ +L T +Q+
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQL 570
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C ++ A+ LL + AP++ +LG+ +G +T + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LRG + TY + G G +AM +F M +C P T++HG
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +E +P+I YNA+I ++ A+++ + M+ R + TY +
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS +E L+ RM+E P T L++ C + L + G
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +L+ LC R + EEA ++ + +V+E Y L L + + ++L
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/354 (20%), Positives = 147/354 (41%), Gaps = 24/354 (6%)
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L + K + +E ++ +M E FV + ++ L+ C QK++ +A + ++
Sbjct: 362 LCKTGKIDAADELMQ---KMISEGFVP----DAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 206 SR---FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ +P T+ I L +E G ++F +M+ G P +VTY + + YC++G
Sbjct: 415 EKGIQASPVTYTIIIDEL-VREVGSEGPKKIF-DKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA + +M P+L T TLI G + + QA F+ M + KP+ +Y
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 323 MISSLIR------------CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
++ +++ D+ L++++ E+++ Y L + LE
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEE 592
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+ M P ++ C + L L + G+ PH + ++++
Sbjct: 593 AKHFFMGMQNANLTPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIIS 652
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
LC G + A E +L++ E +++L L+Q + + L ++K
Sbjct: 653 SLCEGGNFRTAKEVFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMK 706
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 70/347 (20%), Positives = 130/347 (37%), Gaps = 61/347 (17%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAW----ELMSHVQRTHPSLLTLKSMSIMLSRISKFQS 154
F P ++ + L R + QA ++M + P T I++ + +
Sbjct: 383 FVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYT-----IIIDELVREVG 437
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNK 213
E + FD+M I GI + V ++++C + M++A S+ V+++ R PN
Sbjct: 438 SEGPKKIFDKM---IATGINP-DIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLV 493
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG------------ 261
T N L+ G+ G V+ + MV +G++P+ +Y + + KK
Sbjct: 494 TYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIA 553
Query: 262 -------------------------CF----------GDAMRLFEEMERVACLPSLQTIT 286
CF +A F M+ PS T
Sbjct: 554 DMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANLTPSEDVYT 613
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
++I ++ + A L D M K P + +Y +ISSL + A E+ ++ K
Sbjct: 614 SIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKEVFGDLLLK 673
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+D + + + +GL++ + L M E + P M+
Sbjct: 674 ESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNTINAMI 720
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 110/297 (37%), Gaps = 48/297 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL A + + S+ ++ +R N +T L+ + +GD+ A + ++
Sbjct: 44 LNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRN 297
G P Y + GYC+ G A R+F M CL + T T L+HG AG+VR
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR- 159
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+A +F M + PD Y M+ L A L++E + V Y+
Sbjct: 160 --EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G + +E K+++ M + P RT L
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL------------------------ 253
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+ GLC G+ E A +M+ + + +Y L+Q NE
Sbjct: 254 -----------IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA----LIQGQCNE 295
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 268 RLFEEMERVAC-LPS--LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
R+F +ME +A +P+ L+T TTLI+ L +I A+Q + L PD AY + +
Sbjct: 55 RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
R L A + M + TY + GL+ + + ++ M
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C R + L + GF P+ + L+ G C+ G E A +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ M R + +Y L L ++ E+
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 677
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 100/397 (25%), Positives = 187/397 (47%), Gaps = 19/397 (4%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P TT ++ LVE+ ++N L+A + F L H +P +F + + +R +
Sbjct: 288 PDTTTYNTLLVES------CRNNNFLEAKDIFSDML-HRGVSPDLISFSSLIGVSSRNGH 340
Query: 119 FDQAWELMSHVQRTHPSLLTLKSM--SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRK 175
DQA + + + S L ++ +I+++ + E LE D+M E+ + +
Sbjct: 341 LDQA---LMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVA 397
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+ N +L C +K + +A ++F +++ R P+ T L+ G + G++
Sbjct: 398 Y-----NTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSL 452
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ M + +P +VTYNI IDG+CK A L+ EM P+ + L++G
Sbjct: 453 FGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCN 512
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + +A +L+DEM ++ +KP + N +I R DL+ A E + +M + +G D++T
Sbjct: 513 LGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSIT 572
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G +K ++ L ++M P T +++ FC R+ + +I
Sbjct: 573 YNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMI 632
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+RG P L+ G S+ +EAF +ML R
Sbjct: 633 ERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQR 669
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/374 (22%), Positives = 165/374 (44%), Gaps = 10/374 (2%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+ ++ R +A+E+M+ + + P+L T ++ ++ + K Y F
Sbjct: 222 TYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV---INGLCKKGRYVRAKGVF 278
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
+ M + +G+ + +N LL C EA+ +F +L R +P+ + + L+
Sbjct: 279 NEM---LSIGLSP-DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGV 334
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+G + M++ +M G P V Y I I+GYC+ G +A+ + ++M C
Sbjct: 335 SSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALD 394
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T+++G + + A LFDEM +R + PD + +I + ++ A+ L
Sbjct: 395 VVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFG 454
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M +K I D VTY+ + G K++ +E +L++ MI K P + +L+ +C
Sbjct: 455 IMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLG 514
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
V LW +I +G P + ++ G C G +A E +M+ +Y
Sbjct: 515 FVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYN 574
Query: 462 MLQRYLVQANANEK 475
L V+ +K
Sbjct: 575 TLINGFVKGEYMDK 588
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 108/495 (21%), Positives = 185/495 (37%), Gaps = 100/495 (20%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAF--EKTLHILARMR---YFDQAWELMSHVQRTHPSLLT 138
L LE + Q P + PD+F EK L L R+R D ++ ++R+ S +
Sbjct: 40 LHTLENCQNPNQEPTSSAPPDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRVE 99
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF--GSEEF--------------- 181
+ I +S + FD + R +V RK G++ F
Sbjct: 100 IVESLISMSSTCGVDNL-----VFDLLIRS-YVQARKLNEGTDTFKILRRKGFLVSINAC 153
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL + A V+ ++ S N T+NI++ + + ++ F +M
Sbjct: 154 NSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G +VTYN I+ YC++G G+A + M P+L T +I+G +
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT--- 357
A+ +F+EM L PD YN ++ R + A ++ +M + + D +++ +
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIG 333
Query: 358 ------------MFFGLMKSSG-------------------------------------- 367
M+F MK+SG
Sbjct: 334 VSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCAL 393
Query: 368 --------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
L G+CK L+D M+E VP T L+ C + L+L+
Sbjct: 394 DVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLF 453
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQ 469
G + + P ++L+ G C E+A E +M+ R+ + SY +L Y
Sbjct: 454 GIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNL 513
Query: 470 ANANEKLEDLDRMIK 484
+E D MI+
Sbjct: 514 GFVSEAFRLWDEMIR 528
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 108/235 (45%), Gaps = 11/235 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KAL F Q + P + + + ++A EL + + ++ P+ + S
Sbjct: 448 KALSLFGIMTQK-NIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHI---SY 503
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+I+++ E +D M R+ GI+ N +++ +C ++ +A
Sbjct: 504 AILVNGYCNLGFVSEAFRLWDEMIRK---GIKP-TLVTCNTVIKGYCRSGDLSKADEFLG 559
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K++S P++ T N L+ GF + + ++M +G +P VVTYN+ ++G+C++G
Sbjct: 560 KMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQG 619
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+A + +M P T TTLI+G N+ +A + DEM +R PD
Sbjct: 620 RMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674
>gi|296081511|emb|CBI20034.3| unnamed protein product [Vitis vinifera]
Length = 596
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 174/381 (45%), Gaps = 14/381 (3%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
++ E+ R+ R+I++ D+ + L + LS LV VL R A
Sbjct: 152 NSGADPEEVSRVCRVIDELFALDRNMEAVLDEC---NVDLSHALVVGVLERFKHARK--- 205
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
A FF + Q FT + + +L R R F+ ++ + LLT+++ SI
Sbjct: 206 PAFRFFCWAGQKAGFTHNSRTYNAMMSVLGRTRQFESMMGMLGEMGEK--GLLTMETFSI 263
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ + + ++ + F+ M+R F G + N LL K KEA+++F KL
Sbjct: 264 AIKAFAAAKERKKAVGVFELMKRYNFDA----GVDTINCLLDNLGRAKLGKEAQALFEKL 319
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RF PN +T +LL G+ ++ ++EM+ +GF+P ++ ++ ++G K
Sbjct: 320 EDRFTPNLRTYTVLLNGWCRIKNLVEAGRTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKS 379
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA++LFE M+ P+++T T LI + +A + FDEM +PD Y +I
Sbjct: 380 DAIKLFEVMKAKGPSPNVRTYTILIRDLCKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLI 439
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + ++ L+ EM+EK D TY+ + + + ++Y +MI+
Sbjct: 440 TGFGNQKKMDKVYALLKEMKEKGCPADGRTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQ 499
Query: 385 PKTRTVVMLMK--FFCVNFRV 403
T M+MK F+ N+ +
Sbjct: 500 STLHTYNMMMKSYFYTRNYEM 520
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 107/223 (47%), Gaps = 1/223 (0%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F V T N +D + +A LFE++E P+L+T T L++G ++N+ +A
Sbjct: 289 FDAGVDTINCLLDNLGRAKLGKEAQALFEKLED-RFTPNLRTYTVLLNGWCRIKNLVEAG 347
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ ++EM + KPDI A++ M+ L++C+ + A++L + M+ K + TY + L
Sbjct: 348 RTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYTILIRDL 407
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K ++ + +D M++ P L+ F ++D L + ++G G
Sbjct: 408 CKQMKMQEAVEYFDEMVDSGCQPDAAVYTCLITGFGNQKKMDKVYALLKEMKEKGCPADG 467
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ L+ + +R ++A K+M+ Q + +Y M+ +
Sbjct: 468 RTYNALIKLMTNRQMPDDAVRIYKKMIQNGIQSTLHTYNMMMK 510
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 83/203 (40%), Gaps = 44/203 (21%)
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM------------------FFG 361
YNAM+S L R R + M ++ EM EK + +T T F
Sbjct: 227 YNAMMSVLGRTRQFESMMGMLGEMGEKGL----LTMETFSIAIKAFAAAKERKKAVGVFE 282
Query: 362 LMK----SSGLEGVCKLYDRM---------------IEGKFVPKTRTVVMLMKFFC-VNF 401
LMK +G++ + L D + +E +F P RT +L+ +C +
Sbjct: 283 LMKRYNFDAGVDTINCLLDNLGRAKLGKEAQALFEKLEDRFTPNLRTYTVLLNGWCRIKN 342
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
V+ G W +ID+GF P A ++ GL + +A + + M + + +Y
Sbjct: 343 LVEAG-RTWNEMIDKGFKPDIIAHHTMLEGLLKCKKKSDAIKLFEVMKAKGPSPNVRTYT 401
Query: 462 MLQRYLV-QANANEKLEDLDRMI 483
+L R L Q E +E D M+
Sbjct: 402 ILIRDLCKQMKMQEAVEYFDEMV 424
>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Brachypodium distachyon]
Length = 651
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/339 (25%), Positives = 155/339 (45%), Gaps = 12/339 (3%)
Query: 103 PDAFEKTLHILARMRYFD--QAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD + + AR R D A L+ + + P L+T S+ L R ++ E
Sbjct: 192 PDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREV 251
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
A D + +R F N+L+ FC E++EA + ++ R P+ + +
Sbjct: 252 FRAMDACG--VAPDVRSF-----NMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSC 304
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ F G++ + EM G P V Y + I G+C+ G +A+R+ +EM
Sbjct: 305 LIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFG 364
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
CLP + T TL++G R + A +L +EM +R + PD+ + +I R ++ A+
Sbjct: 365 CLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKAL 424
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ D + ++R+ D VTY+T+ G+ + L +L+D M + P T +L+
Sbjct: 425 QFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSH 484
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
C +VD ++++G P+ + ++ G C G
Sbjct: 485 CEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSG 523
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 137/312 (43%), Gaps = 22/312 (7%)
Query: 87 LEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
LE + + F PD + L+ L + R A EL++ ++ P L T
Sbjct: 351 LEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTF--- 407
Query: 143 SIMLSRISKFQSYEETLEAFD-----RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+ ++ + + E+ L+ FD R+ +I +N L+ C Q ++ +A
Sbjct: 408 TTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVT---------YNTLIDGMCRQGDLGKA 458
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ + SR PN+ T +IL+ E G V F EMV +G P+++TYN I G
Sbjct: 459 NELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKG 518
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+ G + +M +P L T TLIHG +H+A L M N++PD
Sbjct: 519 YCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPD 578
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
YN +IS ++ A + +M + I D TY +M G + + + +L+D
Sbjct: 579 AVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHD 638
Query: 377 RMIEGKFVPKTR 388
M++ P +
Sbjct: 639 EMLQKGLAPDDK 650
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 7/279 (2%)
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEM 233
K G +N +L+ +AR VF + AP+ ++ N+L+ GF +G++
Sbjct: 226 KPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELEEALR 285
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-- 291
FY EM R P VV+++ I + ++G A EM +P T +I G
Sbjct: 286 FYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFC 345
Query: 292 -AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
AGL + +A ++ DEM PD+ YN +++ L + R L+ A EL++EM+E+ +
Sbjct: 346 RAGL---MLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPP 402
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D T+ T+ G + +E + +D + + + P T L+ C + LW
Sbjct: 403 DLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELW 462
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ R P+ +L+ C +G+ + AF +M+
Sbjct: 463 DDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMV 501
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 133/304 (43%), Gaps = 5/304 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+++ ++C + E +V ++ R P+ T N+++ +GDV A MV
Sbjct: 162 LNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMV 221
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P +VTYN + G + G + A +F M+ P +++ LI G +
Sbjct: 222 SKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAGELE 281
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + + EM R + PD+ +++ +I R +++ A E + EM E + D V Y +
Sbjct: 282 EALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVI 341
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ + ++ D M+ +P T L+ C R+ L + +RG
Sbjct: 342 GGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVP 401
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ----ANANEK 475
P L+ G C G E+A + + +R + +Y L + + ANE
Sbjct: 402 PDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANEL 461
Query: 476 LEDL 479
+D+
Sbjct: 462 WDDM 465
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 5/314 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ FC M EA V ++++ P+ T N LL G + ++ E +EM
Sbjct: 337 YTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMK 396
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P + T+ I GYC+ G A++ F+ + P + T TLI G ++
Sbjct: 397 ERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLG 456
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+D+M R + P+ Y+ +I S ++ A +DEM K I + +TY+++
Sbjct: 457 KANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSII 516
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +S + + +M K +P T L+ + ++ NL + +
Sbjct: 517 KGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQ 576
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLED 478
P +++++G G +EA K+M R + +Y M+ ++V N+ + +
Sbjct: 577 PDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQL 636
Query: 479 LDRMIKNLQAVLPP 492
D M LQ L P
Sbjct: 637 HDEM---LQKGLAP 647
>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 548
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 184/408 (45%), Gaps = 12/408 (2%)
Query: 83 GLKALEFFKFT-LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTL 139
GL +L F F + + PT F + L + QA V Q H L
Sbjct: 110 GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFH---LDQ 166
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
S +++ + K L+ R++ ++ + + +N+++ C K + +A
Sbjct: 167 VSYGTLINGLCKVGRITAALQLLKRVDGKLV----QPNAVMYNMIIDNMCKAKLVNDAFD 222
Query: 200 VFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ ++++ R P+ T N L+ GF + +++M P+V T+NI +DG+C
Sbjct: 223 LYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFC 282
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G DA + M + P + T +L+ G + +++A+ +FD M + ++
Sbjct: 283 KEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQ 342
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y M++ + + ++ A+ L +EM ++I + VTY ++ GL K + KL D M
Sbjct: 343 IYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEM 402
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ P T ++ C N VD + L L D+G P + +L+ GLC GR
Sbjct: 403 HDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRL 462
Query: 439 EEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
E+A + +LV+ + +Y M+Q + + ++ L L +M N
Sbjct: 463 EDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDN 510
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 166/354 (46%), Gaps = 10/354 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + + + + A++L S + +R P + T ++ S +SK
Sbjct: 199 PNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNY---A 255
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
++ F++M++E I FN+L+ FC + ++ +A+ V ++ P+ T N
Sbjct: 256 IDLFNKMKKE---NINP-NVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNS 311
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ V + + M G +V Y ++G+CK +A+ LFEEM
Sbjct: 312 LMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRK 371
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P++ T ++LI G + I A +L DEM R P+I Y++++ +L + ++ A+
Sbjct: 372 IIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAI 431
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ ++++ I D TY + GL +S LE +++ ++ + ++++ F
Sbjct: 432 ALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGF 491
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C D L L + D G P+ +L++ L + + A + ++M+VR
Sbjct: 492 CDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVR 545
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 161/377 (42%), Gaps = 16/377 (4%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT-LKSMSIMLSR 148
F L H + TP F K L L + ++ A L H Q + + + +I+++
Sbjct: 48 FNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSL--HQQMELNGIESDFFTFNILINC 105
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKL 204
S+ + + IF I K G + FN L++ C + + +A K+
Sbjct: 106 FSQL--------GLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKV 157
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ F + + L+ G + G +TA + + +P+ V YN+ ID CK
Sbjct: 158 VAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLV 217
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L+ +M P + T LI G V ++ A LF++M K N+ P++ +N +
Sbjct: 218 NDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNIL 277
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + +N A ++ M + I D VTY+++ G + + ++D M G
Sbjct: 278 VDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGV 337
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ + ++ FC VD +NL+ + R P+ L+ GLC GR A +
Sbjct: 338 IANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALK 397
Query: 444 CSKQMLVRRRQVSEASY 460
+M R + + +Y
Sbjct: 398 LVDEMHDRGQPPNIVTY 414
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 163/378 (43%), Gaps = 20/378 (5%)
Query: 98 HFTPTPD---AFEKTLHILARMRYF-DQAWELMS-------HVQRTHPSLLTLKSMSIML 146
+FTP P+ F ++ + +++ + D+ L+S H T P+ + +L
Sbjct: 13 NFTPNPNFIGLFPSSIRLFSQLHHKQDEENNLISSFNHLLLHKNPTPPTF----QFNKIL 68
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
S + K + + L +ME GI FN+L+ F + S+F K+L
Sbjct: 69 SSLVKAKHHSTALSLHQQMELN---GIES-DFFTFNILINCFSQLGLNSLSFSIFAKILK 124
Query: 207 R-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+ + P T N L+ G G + F+ ++V +GF V+Y I+G CK G
Sbjct: 125 KGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITA 184
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A++L + ++ P+ +I + ++ A L+ +M + + PD+ YNA+IS
Sbjct: 185 ALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALIS 244
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
LN A++L ++M+++ I + T++ + G K + + M++ P
Sbjct: 245 GFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKP 304
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T LM +C +V+ +++ + G + +V G C +EA
Sbjct: 305 DVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLF 364
Query: 446 KQMLVRRRQVSEASYRML 463
++M R+ + +Y L
Sbjct: 365 EEMRCRKIIPNVVTYSSL 382
>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
Length = 621
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 164/356 (46%), Gaps = 38/356 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C EM+ A VF + +R +PN +T L+ G +SG V + + MV
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-------------- 285
G P+VVTY I G C +G A RL ME +P+ T
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 286 ---------------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
T+LI G I A +L +M PD +Y+++I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L R + L+ A ++++M EK I VTY + L++ G EG K++D+MI
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T + ++ +C R++ ++ ++DRG P+ + L+ G + G +AF
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM--IKNLQAVLPPPTRQQV 498
+ M+ + + +E SY +L R +V+ ++++ D+ ++ +K+LQ +L T +Q+
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQVLLEDITERQL 570
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 127/300 (42%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C ++ A+ LL + AP++ +LG+ +G +T + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LRG + TY + G G +AM +F M +C P T++HG
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +E +P+I YNA+I ++ A+++ + M+ R + TY +
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS +E L+ RM+E P T L++ C + L + G
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +L+ LC R + EEA ++ + +V+E Y L L + + ++L
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADEL 374
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 110/297 (37%), Gaps = 48/297 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL A + + S+ ++ +R N +T L+ + +GD+ A + ++
Sbjct: 44 LNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRN 297
G P Y + GYC+ G A R+F M CL + T T L+HG AG+VR
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR- 159
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+A +F M + PD Y M+ L A L++E + V Y+
Sbjct: 160 --EAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G + +E K+++ M + P RT L
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL------------------------ 253
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+ GLC G+ E A +M+ + + +Y L+Q NE
Sbjct: 254 -----------IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA----LIQGQCNE 295
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 268 RLFEEMERVAC-LPS--LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
R+F +ME +A +P+ L+T TTLI+ L +I A+Q + L PD AY + +
Sbjct: 55 RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
R L A + M + TY + GL+ + + ++ M
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCA 174
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C R + L + GF P+ + L+ G C+ G E A +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ M R + +Y L L ++ E+
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Score = 38.9 bits (89), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 4/161 (2%)
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
A LP L+ + TL+ R L MP RNL+ Y +I++ D+ AA
Sbjct: 36 APLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAA 91
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ + + + D+ Y + G ++ L C+++ M + T L+
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
V + ++ + P H +V GLC GR
Sbjct: 152 LLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGR 192
>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 701
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 170/381 (44%), Gaps = 42/381 (11%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFV---- 171
+ WE + +P+++T +IM++ + K ++E+LE ++RM E+++F
Sbjct: 242 EIWERLVKDCSVYPNVVTY---NIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSL 298
Query: 172 --GIRKFGSEE--------------------FNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
G+ + G+ + N +L FC ++KE+ +++ +
Sbjct: 299 IHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC 358
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ NIL+ G E+G V + + +G RP TY + I G CK G A+++
Sbjct: 359 QTVVSYNILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKI 418
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+E E ++++ G + +A + ++M KR K D N +I+ +R
Sbjct: 419 FKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVR 478
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
L A+ EME K V+Y+T+ GL K+ M+E ++ P T
Sbjct: 479 ASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMIT 538
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM- 448
+LM C ++++ LNLW +D+GF P ++L+ GLCS + E+A + M
Sbjct: 539 CSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMK 598
Query: 449 -------LVRRRQVSEASYRM 462
LV R + E Y++
Sbjct: 599 RSTCVPNLVTRNTLMEGLYKV 619
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/308 (23%), Positives = 131/308 (42%), Gaps = 9/308 (2%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
WEL+ + P T +++ + K + L+ F E G K + ++
Sbjct: 384 WELLCK-KGCRPESTTY---GVLIHGLCKNGRLNKALKIFKEAED----GPGKLDAYAYS 435
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++ C + M EA S+ ++ R + + N L+ GF + + F+ EM +
Sbjct: 436 SMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECK 495
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P++V+YN I G CK F +A +EM P + T + L+ G + I A
Sbjct: 496 GCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMA 555
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L+ + + KPDI YN ++ L L A++L M+ + VT +T+ G
Sbjct: 556 LNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEG 615
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L K E +++D +++ P + + +K C R+ + ++RG P
Sbjct: 616 LYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPT 675
Query: 422 GHALDLLV 429
++LV
Sbjct: 676 AVTWNILV 683
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 94/450 (20%), Positives = 185/450 (41%), Gaps = 46/450 (10%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
Q P + V+ + +A + KAL+ F+ P ++ L+ +
Sbjct: 73 AQKCPCKEDVALTVI-KAYAKNKMSNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNE 131
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+D+A + + S L++ +I++ K Q E+ + D M + K
Sbjct: 132 WDRAESFSRYFESMDVSP-NLQTYNILIKISCKKQQIEKAISLLDWMWSQNL----KPDV 186
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHE 237
+ L+ ++ A VF ++ R + T N+L+ GF + GD + +
Sbjct: 187 FSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWER 246
Query: 238 MVLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+V P+VVTYNI I+G CK G F +++ ++E M + + T ++LIHG
Sbjct: 247 LVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAG 306
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
NI A +++ E+ + +L D +NAM++ R + + EL M ++ V+Y+
Sbjct: 307 NIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENC-QTVVSYN 365
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL------- 409
+ GL ++ +E +++ + + P++ T +L+ C N R++ L +
Sbjct: 366 ILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDG 425
Query: 410 --------WGYLIDRGFCPHG---------------------HALDLLVTGLCSRGRWEE 440
+ ++D G C G H + L+ G + E+
Sbjct: 426 PGKLDAYAYSSMVD-GLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLED 484
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
A ++M + + SY L + L +A
Sbjct: 485 AINFFREMECKGCSPTIVSYNTLIKGLCKA 514
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 140/338 (41%), Gaps = 15/338 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ S +I++ + + EE + ++ + ++ G R S + VL+ C + +A
Sbjct: 360 TVVSYNILIKGLFENGKVEEAISIWELLCKK---GCRP-ESTTYGVLIHGLCKNGRLNKA 415
Query: 198 RSVFVKL------LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+F + L +A ++ ++ G + G + ++M RG++ N
Sbjct: 416 LKIFKEAEDGPGKLDAYAYSS-----MVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCN 470
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I+G+ + DA+ F EME C P++ + TLI G +A EM ++
Sbjct: 471 PLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEK 530
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
KPD+ + ++ L + + + A+ L + +K D Y+ + GL LE
Sbjct: 531 EWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDA 590
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+LY M VP T LM+ + +W ++ G P + ++ + G
Sbjct: 591 LQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKG 650
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
LCS R +A E L R + ++ +L R V
Sbjct: 651 LCSCSRISDAIEFLNDALNRGILPTAVTWNILVRAAVN 688
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/294 (21%), Positives = 130/294 (44%), Gaps = 41/294 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P + +H L + ++A ++ + P L + S M+ + K +E +
Sbjct: 394 PESTTYGVLIHGLCKNGRLNKALKIFKEAE-DGPGKLDAYAYSSMVDGLCKEGRMDEAIS 452
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
++M++ + K N L+ F ++++A + F ++ + +P + N L+
Sbjct: 453 IVNQMDKRGY----KLDPHVCNPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTLI 508
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK----------------KG-- 261
G ++ + F EM+ + ++P ++T ++ +DG C+ KG
Sbjct: 509 KGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGFK 568
Query: 262 -------------C----FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
C DA++L+ M+R C+P+L T TL+ G VR+ +A ++
Sbjct: 569 PDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLYKVRDYEKASEI 628
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+D + K L PDI +YN I L C ++ A+E +++ + I VT++ +
Sbjct: 629 WDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRGILPTAVTWNIL 682
>gi|356526063|ref|XP_003531639.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 1 [Glycine max]
gi|356526065|ref|XP_003531640.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like isoform 2 [Glycine max]
Length = 522
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 98/410 (23%), Positives = 180/410 (43%), Gaps = 14/410 (3%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNG-LKALEFFKFTLQHPHFTPTPDAFEKTLHILA 114
H + PLS++L L L A N + +L+ + L+H + T D LH L+
Sbjct: 55 SHWEKLLPLSTSLTPFRLKHLLLALQNDHVSSLKLSTWVLKHNPSSHTLDTHSILLHTLS 114
Query: 115 RMRYFDQAWELMSHVQRTHP--SLLTLKSMSIMLSRISK---FQSYEETLEAFD--RMER 167
+ R F + ++ +HP +L S L S F S +TL + R
Sbjct: 115 KHRQFKTTQKFLTQTLSSHPPHTLFDALLFSYRLCNSSSPLVFDSLFKTLAHTNKFRHAT 174
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLG 221
I+ +++ G + N L + + A + + ++ R +PN T+N+++
Sbjct: 175 HIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALAFYREIRRRSCVSPNVYTLNMIIRA 234
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G+V +M+ G P+VV++N I GYC KG FG A+++ M P+
Sbjct: 235 YCMLGEVQKGFDMLEKMMDMGLSPNVVSFNTLISGYCNKGLFGLALKVKSLMVENGVQPN 294
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T TLI+G R +H+A ++F+EM N+ P + YN +++ + D + + +
Sbjct: 295 VVTFNTLINGFCKERKLHEANRVFNEMKVANVDPSVVTYNTLLNGYGQVGDSEMGVRVYE 354
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM + D +TY+ + GL K + + + VP T L+ CV
Sbjct: 355 EMMRNGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALITGQCVRN 414
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ ++ ++ G P+G +L++ C ++ A + + ML R
Sbjct: 415 NSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGR 464
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/392 (23%), Positives = 155/392 (39%), Gaps = 47/392 (11%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS LV + L + A H+N + ++ F+PT + L L R+R D A
Sbjct: 152 SSPLVFDSLFKTLA-HTNKFRHATHIYTLMKEHGFSPTVQSCNAFLSSLLRLRRADIALA 210
Query: 125 LMSHVQR---THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
++R P++ TL + I + E + FD +E+ + +G+ F
Sbjct: 211 FYREIRRRSCVSPNVYTLNMI------IRAYCMLGEVQKGFDMLEKMMDMGLSP-NVVSF 263
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ +C + A V ++ PN T N L+ GF + + ++EM +
Sbjct: 264 NTLISGYCNKGLFGLALKVKSLMVENGVQPNVVTFNTLINGFCKERKLHEANRVFNEMKV 323
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
PSVVTYN ++GY + G +R++EEM R
Sbjct: 324 ANVDPSVVTYNTLLNGYGQVGDSEMGVRVYEEMMR------------------------- 358
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
LK DI YNA+I L + A + E++++ + + T+ +
Sbjct: 359 ----------NGLKADILTYNALILGLCKDGKTKKAAGFVRELDKENLVPNASTFSALIT 408
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G + E +Y M+ P +T ML+ FC N D + + ++ R P
Sbjct: 409 GQCVRNNSERAFLIYRSMVRSGCSPNGQTFQMLISAFCKNEDFDGAVQVLRDMLGRLMSP 468
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ L GLC G+ + A +M VRR
Sbjct: 469 DLSTMSELCDGLCRCGKNQLALALCSEMEVRR 500
>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
Length = 932
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 159/345 (46%), Gaps = 12/345 (3%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ F + I L + D+A L+ V R P ++T ++ L R S+ EE
Sbjct: 328 PNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEEC 387
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNI 217
L ++ G + +N ++ +C + + +A + + F P+ T
Sbjct: 388 LH-------KMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCS 440
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF + GD + + + +G RPS++ YN I G C++G A++L EM
Sbjct: 441 LVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKG 500
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T +I+G + + A L + + PDI YN ++ R L++A+
Sbjct: 501 CKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAI 560
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL++ M + + D +TY+T+ GL K++ E V +++ M E P T +++
Sbjct: 561 ELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESL 620
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
C + +V+ ++L G + +G P + L+TG C G + A+
Sbjct: 621 CNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAY 665
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/263 (22%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A + +++ P+ T N L+ G+ + + + M
Sbjct: 508 YNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMW 567
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V+TYN ++G CK + M +F+ M C P++ T T+I + ++
Sbjct: 568 SQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVN 627
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK-RIGHDNVTYHTM 358
+A L EM + L PD+ ++ +I+ + DL+ A L ME++ + H TY+ +
Sbjct: 628 EAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNII 687
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ ++ +L+ M + P T +L+ FC V+ G I++GF
Sbjct: 688 ISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGF 747
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P ++ LC + +EA
Sbjct: 748 IPSLTTFGRVLNCLCVEHKVQEA 770
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 2/242 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C Q ++ A + ++ S+ P+ T N LL G ++ + + M
Sbjct: 543 YNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMT 602
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYN I+ C +A+ L EM+ P + + TLI G V ++
Sbjct: 603 EKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLD 662
Query: 300 QARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A LF M K+ ++ YN +IS+ ++ A+ L EM++ DN TY +
Sbjct: 663 GAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVL 722
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K+ + K IE F+P T ++ CV +V + + ++ +
Sbjct: 723 IDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGIIHLMVQKDI 782
Query: 419 CP 420
P
Sbjct: 783 VP 784
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 92/399 (23%), Positives = 157/399 (39%), Gaps = 56/399 (14%)
Query: 116 MRYFDQAWELMSHVQRTHP----SLLTLKSMSIMLSRISKFQSYEETL-EAFDRMEREIF 170
M+Y D + +++T +L T KSM L KF E L E ++ +
Sbjct: 95 MKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSNLDNTLL 154
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPN----NKTMNILLLGFKES 225
G+ + ++ + + +++EA F ++ L P+ N MNIL+ E
Sbjct: 155 EGV-------YVEAMRFYGRKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILV----EF 203
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG----------------CFGDAM-- 267
G Y M + V TY IRI +C+ G CF +A+
Sbjct: 204 GYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAY 263
Query: 268 -----------------RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
LF+EM P + T L+H + ++ +LFD++ K
Sbjct: 264 CTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLK 323
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R + P++ +N I L + L+ A+ L+ + + + D VTY+T+ GL + S +
Sbjct: 324 RGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVE 383
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+ +M+ G F P T ++ +C V + + +GF P LV
Sbjct: 384 AEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVN 443
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G C G ++A K L + + S Y L + L Q
Sbjct: 444 GFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQ 482
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 116/265 (43%), Gaps = 4/265 (1%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ GF E GD + EM+ P V T+N + CKKG ++ RLF+++ +
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P+L T I G ++ +A +L + + L+PD+ YN +I L R + A
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
E + +M ++ TY+++ G K + ++ + F P T L+ F
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + D + ++ + +G P + L+ GLC +G A + +M + +
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505
Query: 458 ASYRMLQRYLVQ----ANANEKLED 478
+Y ++ L + ++AN + D
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGD 530
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 17/264 (6%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F + R D A EL++ + Q P ++T ++ L+ + K EE
Sbjct: 538 PDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTL---LNGLCKTAKSEEV 594
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+E F M E+ I +N ++++ C K++ EA + ++ S+ P+ +
Sbjct: 595 MEIFKAMTEKGCAPNII-----TYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFG 649
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ GF + GD+ + M + + TYNI I + ++ A+RLF EM++
Sbjct: 650 TLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKK 709
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P T LI G N++Q + E ++ P + + +++ L +
Sbjct: 710 NGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQE 769
Query: 336 AMELMDEMEEKRIGHDNVTYHTMF 359
A+ ++ M +K I D V +T+F
Sbjct: 770 AVGIIHLMVQKDIVPDTV--NTIF 791
>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
Length = 762
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 145/307 (47%), Gaps = 5/307 (1%)
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
FD M+R+ G+ G + L+ C E+KEA V ++L+R + T +L+
Sbjct: 387 FDEMQRK---GLATDGVT-YTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVD 442
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G + ++ MV RG P+VVTY DG CK+G A L EM
Sbjct: 443 GYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL 502
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T +LI+G + QA + +M LKPD+ Y +I +L + +L+ A +L+
Sbjct: 503 NACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLL 562
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + I VTY+ + G S +EG KL + M+E P T LMK +C+
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ + R P+ + ++L+ G C +EA +M+ + +++ +SY
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682
Query: 461 RMLQRYL 467
L R L
Sbjct: 683 SALIRLL 689
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 2/312 (0%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
E+F G+ +N+LL+ C +++AR +F ++ S P+ T IL+ G+ G+
Sbjct: 252 ELFQGLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMAS--PPDVVTYGILIHGYCALGE 309
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ +MV RG P+ Y + C KG DA+ + E+M + TT
Sbjct: 310 LENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTT 369
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G ++ AR+ FDEM ++ L D Y +I+ L R +L A +++ EM +R
Sbjct: 370 VLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARR 429
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D VTY + G K + ++++ M++ P T L C V
Sbjct: 430 LDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAAN 489
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L + ++G + + L+ GLC G ++A M + +Y L L
Sbjct: 490 ELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDAL 549
Query: 468 VQANANEKLEDL 479
++ ++ DL
Sbjct: 550 CKSGELDRAHDL 561
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/293 (20%), Positives = 110/293 (37%), Gaps = 44/293 (15%)
Query: 129 VQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
VQR P+++T ++S L + Q+ E L E+ + +N L+
Sbjct: 461 VQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLEL-------NACTYNSLING 513
Query: 188 FCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C + +A + + P+ T L+ +SG++ EM+ G +P+
Sbjct: 514 LCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPT 573
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+VTYN+ ++G+C G +L E M P+ T +L+ + N+ +++
Sbjct: 574 IVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYK 633
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM-------- 358
M RN++P+ YN +I + R + A +EM EK +Y +
Sbjct: 634 GMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKK 693
Query: 359 -------FFGLMKSSG--------------------LEGVCKLYDRMIEGKFV 384
F M+ G LE L D ++E V
Sbjct: 694 KFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEASIV 746
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 99/246 (40%), Gaps = 10/246 (4%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ ++ L + Y DQA M+ + P + T ++ L + + A D
Sbjct: 507 YNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELD------RAHD 560
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++ + GI K +NVL+ FC ++ + + +L + PN T N L+ +
Sbjct: 561 LLQEMLDNGI-KPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQY 619
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
++ + Y M R P+ TYNI I G+CK +A EM +
Sbjct: 620 CIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTA 679
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ + LI + +AR+LF +M K + YN I +L A + L DE
Sbjct: 680 SSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDE 739
Query: 343 MEEKRI 348
+ E I
Sbjct: 740 LVEASI 745
>gi|125569053|gb|EAZ10568.1| hypothetical protein OsJ_00400 [Oryza sativa Japonica Group]
Length = 514
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 18/386 (4%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ- 130
VL L SN AL FFK+ P + A+ + L IL RM+ +L +
Sbjct: 95 VLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPV 154
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQ 186
+ S++T + +++L+R + +E ++ F + + +G E F +LL
Sbjct: 155 ESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKR--------KDYGFELDLVGFQILLM 206
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
+ C K ++EA ++F++ F P K+ NI+L G+ G + + ++E++ +P
Sbjct: 207 SLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPD 266
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ TY I+ K G A++LF M P + +I + I +A ++F
Sbjct: 267 LFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFG 326
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R + D+ YN +I + + EL+D+ME K + +N+TY + L +
Sbjct: 327 EMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS---YILKTTE 383
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL-WGYLIDRGFCPHGHAL 425
+ V L RM + + T +++ + V++ + G+ L W + G P +
Sbjct: 384 KPKDVISLMQRMEKSGCRLDSDTYNLILNLY-VSWDYEKGVQLVWDEMERNGSGPDQRSF 442
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVR 451
++V GL S + +EA + M R
Sbjct: 443 TIMVHGLHSHDKLDEALHYYRTMESR 468
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 13/240 (5%)
Query: 228 VTAMEMFYHEMVLRGFRPSVVT---YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
V M + E+ + R SVVT + + ++ Y +A+ +F + + L
Sbjct: 142 VRLMRQLFDEIPVES-RQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVG 200
Query: 285 ITTLIHGAGLVRNIHQARQLF----DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
L+ +++ +A LF DE P P I ++N +++ L A +
Sbjct: 201 FQILLMSLCRYKHVEEAEALFLQKKDEFP-----PVIKSWNIILNGWCVKGSLADAKRVW 255
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+E+ ++ D TY T L KS L KL+ M E P ++ C
Sbjct: 256 NEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFK 315
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
R+ L ++G + DRG + L+ C R E+ +E M V+ + +Y
Sbjct: 316 KRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTY 375
>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 143/298 (47%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ + F++ME + GI+ +N L+ C +A + +
Sbjct: 262 IIDGLCKYKHMDDAFDLFNKMETK---GIKP-DVFTYNSLISCLCNYGRWSDASRLLSDM 317
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN T N L+ F + G + E + EM+ R P++VTYN I+G+C
Sbjct: 318 IERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRL 377
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F M CLP + T TLI G + + + +LF EM +R L + YN +
Sbjct: 378 DEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTL 437
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + D + A ++ +M + D +TY + GL K LE +++ + + K
Sbjct: 438 IQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKM 497
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T ++++ C +V+ G +L+ L +G P+ +++G C +G EEA
Sbjct: 498 EPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEA 555
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 96/377 (25%), Positives = 167/377 (44%), Gaps = 16/377 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PSLLTLKSMSIMLSRISKFQSYEETL 159
P+ F K L +A+M FD L +Q P + SI+L+ + L
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPH--NHYTYSILLNCFCRRSQLPLAL 136
Query: 160 EAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKT 214
+M K G E + LL +C K + EA ++ +++ + P+ T
Sbjct: 137 AVLGKM--------MKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVT 188
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G + MV RG +P + TY ++G CK+G A+ L ++ME
Sbjct: 189 FNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKME 248
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ ++ T+I G +++ A LF++M + +KPD+ YN++IS L +
Sbjct: 249 KGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWS 308
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ +M E++I + VT++++ K L KL+D MI+ P T L+
Sbjct: 309 DASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLI 368
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
FC++ R+D ++ ++ + P + L+ G C R EE E ++M R
Sbjct: 369 NGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLV 428
Query: 455 VSEASYRMLQRYLVQAN 471
+ +Y L + L QA
Sbjct: 429 GNTVTYNTLIQGLFQAG 445
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 21/301 (6%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMS---IMLSRISKFQS 154
F DAF K ++ + FD+ +QR+ P+++T S+ M R+ + Q
Sbjct: 329 FNSLIDAFAKEGKLIEAEKLFDEM------IQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 382
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+ + D + + +N L++ FC K ++E +F ++ R N
Sbjct: 383 IFTLMVSKDCLPDVV----------TYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 432
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G ++GD + + +MV G P ++TY+I +DG CK G A+ +FE +
Sbjct: 433 TYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYL 492
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
++ P++ T +I G + LF + + +KP++ Y MIS R
Sbjct: 493 QKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLK 552
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A L EM+E D+ Y+T+ ++ +L M FV T+ M+
Sbjct: 553 EEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMV 612
Query: 394 M 394
+
Sbjct: 613 I 613
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/254 (20%), Positives = 103/254 (40%), Gaps = 35/254 (13%)
Query: 234 FYHEMVLRGFRPSVVTY-----------------------------------NIRIDGYC 258
+ EMV PS++ + +I ++ +C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILLNCFC 127
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
++ A+ + +M ++ P + T+++L++G + I +A L D+M + KPD
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTV 187
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I L + A+ L+D M + D TY T+ GL K ++ L +M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+GK ++ C +D +L+ + +G P + L++ LC+ GRW
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307
Query: 439 EEAFECSKQMLVRR 452
+A M+ R+
Sbjct: 308 SDASRLLSDMIERK 321
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/157 (21%), Positives = 70/157 (44%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF EM K P I ++ ++S++ + + + L ++M+ I H++ TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S L + +M++ + P T+ L+ +C R+ + L +++ G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+ P + L+ GL + EA +M+ R Q
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQ 218
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 76/184 (41%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF EM + PS+ + L+ + L ++M + + Y+ ++
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILL 123
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L A+ ++ +M + D VT ++ G + L D+M+E +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYK 183
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ RG P +V GLC RG + A
Sbjct: 184 PDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSL 243
Query: 445 SKQM 448
K+M
Sbjct: 244 LKKM 247
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 66/163 (40%), Gaps = 18/163 (11%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFD-----RMEREIFVGIRKFGSEEFNVLLQAF 188
P ++T SI+L + K+ E+ L F+ +ME I+ +N++++
Sbjct: 464 PDIITY---SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYT---------YNIMIEGM 511
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++++ +F L L PN ++ GF G + + EM G P
Sbjct: 512 CKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDS 571
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
YN I + G + L +EM + TI+ +I+
Sbjct: 572 GCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614
>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
Length = 649
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/405 (25%), Positives = 174/405 (42%), Gaps = 11/405 (2%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
++ + P F L L + R FD+A E+ + + + ++S +I++ +
Sbjct: 217 SMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP-DVRSFNILIGGFCRV 275
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPN 211
EE ++ + M++ G+ F+ L+ F T+ +M A + ++ P+
Sbjct: 276 GEVEEAMKFYKEMQQR---GVTP-DVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPD 331
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+++ GF +G ++ EMV G P VVTYN ++G CK+ DA L
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLN 391
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM+ P L T TTLIHG N +A QLFD + + L+PD+ AYN++I + R
Sbjct: 392 EMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKG 451
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
DL A EL D+M + I ++VTY + + +E D M+ +P T
Sbjct: 452 DLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYN 511
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++K +C + V G ++ P + L+ G AF M
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571
Query: 452 RRQVSEASYRM-LQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
Q +Y M + + Q N +E+ R+ K + A P R
Sbjct: 572 MVQPDAVTYNMIINGFSEQGN----MEEAGRVFKKMGASGIEPDR 612
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 137/304 (45%), Gaps = 5/304 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+++ ++C E +A +V ++ R P+ T N+L+ +GDV A M
Sbjct: 160 LNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMA 219
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P +VT+N + G CK F A +F M++ + P +++ LI G V +
Sbjct: 220 NKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVE 279
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + + EM +R + PD+ +++ +I ++ A + EM+ + D V Y +
Sbjct: 280 EAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVI 339
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ + ++ D M+ +P T L+ C R+ L + +RG
Sbjct: 340 GGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVT 399
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ----ANANEK 475
P L+ G C G +E+A + +L +R + +Y L + + A ANE
Sbjct: 400 PDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANEL 459
Query: 476 LEDL 479
+D+
Sbjct: 460 WDDM 463
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 111/241 (46%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ +C ++A +F LL R P+ N L+ G GD+ + +M
Sbjct: 405 FTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+ VTY+I ID +C+KG +A +EM LP++ T ++I G N+
Sbjct: 465 AREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVK 524
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +Q +M + N+ PD+ +N +I I+ +++ A + + ME++ + D VTY+ +
Sbjct: 525 KGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMII 584
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + +E +++ +M P T + L+ L ++ RGF
Sbjct: 585 NGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFA 644
Query: 420 P 420
P
Sbjct: 645 P 645
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 132/296 (44%), Gaps = 20/296 (6%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + L+ L + A EL++ ++ P L T ++ R F E+
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNF---EKA 421
Query: 159 LEAFD-----RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
L+ FD R+ ++ +N L+ C + ++ +A ++ + +R PN+
Sbjct: 422 LQLFDTLLHQRLRPDVVA---------YNSLIDGMCRKGDLAKANELWDDMHAREIFPNH 472
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T +IL+ E G V F EMV +G P+++TYN I GYC+ G + ++
Sbjct: 473 VTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK 532
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M + LP L T TLIHG N+H A +F+ M K ++PD YN +I+ +
Sbjct: 533 MMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGN 592
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ A + +M I D TY ++ G + + + +L+D M+ F P +
Sbjct: 593 MEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDDK 648
>gi|356560325|ref|XP_003548443.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
mitochondrial-like [Glycine max]
Length = 746
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/420 (24%), Positives = 182/420 (43%), Gaps = 50/420 (11%)
Query: 110 LHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
L L R R + EL++ +++ PS++T I+++ + K + +E L+ FDR+
Sbjct: 288 LTWLGRGRDIKRMNELLAEMEKRKIRPSVVTF---GILVNHLCKARRIDEALQVFDRLRG 344
Query: 168 EIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVF--VKLLSRFAPNNKTMNILLLG 221
+ G G E FN L+ C + ++ S+ +K+ + PN T N L+ G
Sbjct: 345 K--GGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCLIDG 402
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F ++G+ + +M G +P+V+T N +DG CK G A+ F EM+ +
Sbjct: 403 FFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGLKGN 462
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI------------------------ 317
T T LI V NI++A Q F+EM PD
Sbjct: 463 AATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDASVVVS 522
Query: 318 -----------GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
YN +IS + + L EL+ EMEE + D +TY+T+ L K+
Sbjct: 523 KLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTG 582
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL- 425
K+ ++MI+ P T ++ +C VD G+ ++G + P +
Sbjct: 583 DFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIY 642
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
++L+ LC + A + M V+R + + +Y +L+ + ++ E +DRM++
Sbjct: 643 NILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVE 702
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 105/216 (48%), Gaps = 2/216 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C M +A V KL L+ F+ + N+L+ GF + + + EM G
Sbjct: 504 LISGLCIAGRMNDASVVVSKLKLAGFSLDRSCYNVLISGFCKKKKLERVYELLTEMEETG 563
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+P +TYN I K G F A ++ E+M + PS+ T +IH +N+ +
Sbjct: 564 VKPDTITYNTLISYLGKTGDFATASKVMEKMIKEGLRPSVVTYGAIIHAYCSKKNVDEGM 623
Query: 303 QLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++F EM + P+ YN +I +L R D++ A+ LM++M+ KR+ + TY+ + G
Sbjct: 624 KIFGEMCSTSKVPPNTVIYNILIDALCRNNDVDRAISLMEDMKVKRVRPNTTTYNAILKG 683
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ L +L DRM+E P T+ +L ++
Sbjct: 684 VRDKKMLHKAFELMDRMVEEACRPDYITMEVLTEWL 719
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 101/240 (42%), Gaps = 7/240 (2%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
A + + N LL D+ M EM R RPSVVT+ I ++ CK +A++
Sbjct: 278 AVDAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQ 337
Query: 269 LFEEM------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL-KPDIGAYN 321
+F+ + V P + TLI G V L +EM N+ +P+ YN
Sbjct: 338 VFDRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYN 397
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + + + A EL +M E+ + + +T +T+ GL K + + ++ M
Sbjct: 398 CLIDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGK 457
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T L+ FC ++ + + ++ G P L++GLC GR +A
Sbjct: 458 GLKGNAATYTALISAFCGVNNINRAMQCFEEMLSSGCSPDAVVYYSLISGLCIAGRMNDA 517
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/197 (21%), Positives = 83/197 (42%), Gaps = 11/197 (5%)
Query: 114 ARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+ + ++ +EL++ ++ T P +T ++ L + F + + ME+ I
Sbjct: 544 CKKKKLERVYELLTEMEETGVKPDTITYNTLISYLGKTGDFATASKV------MEKMIKE 597
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVT 229
G+R + ++ A+C++K + E +F ++ S + PN NIL+ + DV
Sbjct: 598 GLRP-SVVTYGAIIHAYCSKKNVDEGMKIFGEMCSTSKVPPNTVIYNILIDALCRNNDVD 656
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+M ++ RP+ TYN + G K A L + M AC P T+ L
Sbjct: 657 RAISLMEDMKVKRVRPNTTTYNAILKGVRDKKMLHKAFELMDRMVEEACRPDYITMEVLT 716
Query: 290 HGAGLVRNIHQARQLFD 306
V I + + +
Sbjct: 717 EWLSAVGEIEKLKHFVE 733
Score = 41.6 bits (96), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 46/213 (21%), Positives = 84/213 (39%), Gaps = 43/213 (20%)
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
D + NA+++ L R RD+ EL+ EME+++I VT+ + L K+ ++ +++
Sbjct: 280 DAASCNALLTWLGRGRDIKRMNELLAEMEKRKIRPSVVTFGILVNHLCKARRIDEALQVF 339
Query: 376 DRM----------IEGKFV--------------------------------PKTRTVVML 393
DR+ +E V P T T L
Sbjct: 340 DRLRGKGGSNWVGVEPDVVLFNTLIDGLCKVGKEEDGLSLLEEMKMGNINRPNTVTYNCL 399
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ F D L+ + + G P+ L+ LV GLC GR A E +M +
Sbjct: 400 IDGFFKAGNFDRAHELFRQMNEEGVQPNVITLNTLVDGLCKHGRVHRAVEFFNEMKGKGL 459
Query: 454 QVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ + A+Y ++ + N N ++ + M+ +
Sbjct: 460 KGNAATYTALISAFCGVNNINRAMQCFEEMLSS 492
>gi|224129154|ref|XP_002320514.1| predicted protein [Populus trichocarpa]
gi|222861287|gb|EEE98829.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 176/403 (43%), Gaps = 8/403 (1%)
Query: 51 HPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
H +L L + + S +++L L A+ S L F + +P F+
Sbjct: 79 HSIILHILTKKSKFKS--AQSILRTLLASRSIDLPGKLFDTLLFSYRMCDSSPRVFDSLF 136
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
A M F A ++ S + + + L T++S + LS + F + L + M R
Sbjct: 137 KTYAHMNKFRNATDVFSRM-KDYGFLPTVESCNAYLSSLLDFHRVDIALTFYREMRRCRI 195
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVT 229
S FN++L A C ++++A V ++ S PN + N L+ G G ++
Sbjct: 196 SP----NSYTFNLVLSALCKSGKLEKAVEVLREMESVGITPNVVSYNTLIAGHCNKGLLS 251
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ M G P+VVT+N I G+CK+G +A R F EM+ + P+ T TLI
Sbjct: 252 IATKLKNLMGKNGLEPNVVTFNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLI 311
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G G V N + A ++++EM + +K DI YNA+I L + A L+ E++++ +
Sbjct: 312 NGYGQVGNSNMAGKVYEEMMRNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLV 371
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ TY + G + +LY M+ P +T ML F N + N+
Sbjct: 372 PNASTYSALISGQCARKNSDRAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNV 431
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ R + L + GLC G+ A + +M RR
Sbjct: 432 LMDMFARSMASDSNTLLEIYDGLCQCGKENLAMKLCHEMEARR 474
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC + ++ EA F ++ + PN T N L+ G+ + G+ Y EM+
Sbjct: 272 FNSLIHGFCKEGKLHEANRFFSEMKVMNVTPNTVTYNTLINGYGQVGNSNMAGKVYEEMM 331
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + ++TYN I G CK+G A L +E+++ +P+ T + LI G +N
Sbjct: 332 RNGVKADILTYNALILGLCKEGKTKKAAFLVKELDKENLVPNASTYSALISGQCARKNSD 391
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QL+ M + P+ + + S+ ++ D A ++ +M + + D+ T ++
Sbjct: 392 RAFQLYKSMVRSGCHPNEQTFKMLTSAFVKNEDFEGAFNVLMDMFARSMASDSNTLLEIY 451
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPK 386
GL + KL M + +P+
Sbjct: 452 DGLCQCGKENLAMKLCHEMEARRLIPE 478
>gi|357134597|ref|XP_003568903.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Brachypodium distachyon]
Length = 537
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 184/416 (44%), Gaps = 20/416 (4%)
Query: 70 ENVLGRLFAAH-SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH 128
E+V+ R+ SN AL FF + P + P + + L IL RM+ +L
Sbjct: 112 EDVVLRVLQKQRSNWQVALLFFNWAAGLPAYAHGPRTYTEMLDILGRMKKVKLMTQLFDE 171
Query: 129 VQRTHPSLL-TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNV 183
+ L+ T ++ +++L+R + +E +E F + + +G E F +
Sbjct: 172 IPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYKR--------KDYGFEVDLVGFQI 223
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL + C K ++EA ++F++ F P K+ NI+L G+ G + + +++++
Sbjct: 224 LLMSLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKL 283
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+P + TY I+ K G A++LF M P + +I + I +A
Sbjct: 284 KPDLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALD 343
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+F EM R + D+ YN +I + R EL+D+ME K +N+TY + L
Sbjct: 344 IFREMTDRGCQADVATYNTLIKYFCKIRRTEKVYELLDDMENKGCSPNNMTYS---YILK 400
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHG 422
+ + V L RM + + T +++ + V+ + + G+ +W + G P
Sbjct: 401 TTEKPKDVIHLLQRMEKSGCRLDSDTYNLILNLY-VSMKYENGVQQVWDEMERNGSGPDQ 459
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
+ ++V GL S+GR ++A + M R E R+L + + +ED
Sbjct: 460 RSFTIMVHGLHSQGRLDQALQYYTTM-KSRGMTPEPRTRILVKAIHMKKDGPAVED 514
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/214 (17%), Positives = 93/214 (43%), Gaps = 3/214 (1%)
Query: 268 RLFEEM--ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+LF+E+ ER + + +T L++ + +A ++F + + D+ + ++
Sbjct: 167 QLFDEIPEERRGLVVTNRTFAVLLNRYAGAHKVQEAIEMFYKRKDYGFEVDLVGFQILLM 226
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
SL R + + A L + +++ +++ + G L ++++++I K P
Sbjct: 227 SLCRYKHVEEAEALFLQKKDE-FPPVIKSWNIILNGWCVKGSLPDAKRIWNQIIASKLKP 285
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T + ++ + L+ + ++G P + ++ LC + + EA +
Sbjct: 286 DLFTYGTFINSLTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALDIF 345
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++M R Q A+Y L +Y + EK+ +L
Sbjct: 346 REMTDRGCQADVATYNTLIKYFCKIRRTEKVYEL 379
>gi|297719649|ref|NP_001172186.1| Os01g0151900 [Oryza sativa Japonica Group]
gi|9663979|dbj|BAB03620.1| hypothetical protein [Oryza sativa Japonica Group]
gi|13872936|dbj|BAB44041.1| hypothetical protein [Oryza sativa Japonica Group]
gi|215768885|dbj|BAH01114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255672883|dbj|BAH90916.1| Os01g0151900 [Oryza sativa Japonica Group]
Length = 534
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 174/386 (45%), Gaps = 18/386 (4%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ- 130
VL L SN AL FFK+ P + A+ + L IL RM+ +L +
Sbjct: 115 VLKVLQKQRSNWKVALSFFKWAAGLPQYNHGSRAYTEMLDILGRMKKVRLMRQLFDEIPV 174
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQ 186
+ S++T + +++L+R + +E ++ F + + +G E F +LL
Sbjct: 175 ESRQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKR--------KDYGFELDLVGFQILLM 226
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
+ C K ++EA ++F++ F P K+ NI+L G+ G + + ++E++ +P
Sbjct: 227 SLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLADAKRVWNEIIASKLKPD 286
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ TY I+ K G A++LF M P + +I + I +A ++F
Sbjct: 287 LFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKRIPEALEIFG 346
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R + D+ YN +I + + EL+D+ME K + +N+TY + L +
Sbjct: 347 EMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTYS---YILKTTE 403
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL-WGYLIDRGFCPHGHAL 425
+ V L RM + + T +++ + V++ + G+ L W + G P +
Sbjct: 404 KPKDVISLMQRMEKSGCRLDSDTYNLILNLY-VSWDYEKGVQLVWDEMERNGSGPDQRSF 462
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVR 451
++V GL S + +EA + M R
Sbjct: 463 TIMVHGLHSHDKLDEALHYYRTMESR 488
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/240 (22%), Positives = 94/240 (39%), Gaps = 13/240 (5%)
Query: 228 VTAMEMFYHEMVLRGFRPSVVT---YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
V M + E+ + R SVVT + + ++ Y +A+ +F + + L
Sbjct: 162 VRLMRQLFDEIPVES-RQSVVTNRMFAVLLNRYAGAHKVQEAIDMFYKRKDYGFELDLVG 220
Query: 285 ITTLIHGAGLVRNIHQARQLF----DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
L+ +++ +A LF DE P P I ++N +++ L A +
Sbjct: 221 FQILLMSLCRYKHVEEAEALFLQKKDEFP-----PVIKSWNIILNGWCVKGSLADAKRVW 275
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+E+ ++ D TY T L KS L KL+ M E P ++ C
Sbjct: 276 NEIIASKLKPDLFTYGTFINSLTKSGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFK 335
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
R+ L ++G + DRG + L+ C R E+ +E M V+ + +Y
Sbjct: 336 KRIPEALEIFGEMNDRGCQADVATYNTLIKHFCKINRMEKVYELLDDMEVKGVSPNNMTY 395
>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
Length = 695
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 165/379 (43%), Gaps = 13/379 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + L L R +D+AWE+ + P + +S +I++ + EE
Sbjct: 163 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV---RSFTILIGGFCRVGEIEEA 219
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
L+ + M GI K F+ L+ F + +M A + +++ + F P+
Sbjct: 220 LKIYKEMRHR---GI-KPDLVSFSCLIGLFARRGKMDHAMA-YLREMRCFGLVPDGVIYT 274
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+++ GF +G ++ EMV G P VVTYN ++G CK+ DA L EM
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P L T TTLIHG + + +A QLFD M + L+PDI YN +I + R DL+ A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L D+M + I ++VTY + + +E D MI +P T ++K
Sbjct: 395 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 454
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C + V G ++ P + L+ G + +AF+ M + Q
Sbjct: 455 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 514
Query: 457 EASYRML-QRYLVQANANE 474
+Y ML + V N E
Sbjct: 515 VVTYNMLINGFSVHGNVQE 533
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 1/314 (0%)
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKES 225
R +F + + N+++ +C E + +V ++ R P+ T N+++ +
Sbjct: 84 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 143
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
GD A MV +G +P +VTYN + G C+ G + A +F+EM+ P +++
Sbjct: 144 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 203
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
T LI G V I +A +++ EM R +KPD+ +++ +I R ++ AM + EM
Sbjct: 204 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 263
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ D V Y + G ++ + ++ D M+ +P T L+ C R+
Sbjct: 264 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 323
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L + +RG P L+ G C G+ ++A + ML +R + +Y L
Sbjct: 324 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 383
Query: 466 YLVQANANEKLEDL 479
+ + +K DL
Sbjct: 384 GMCRQGDLDKANDL 397
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/280 (24%), Positives = 129/280 (46%), Gaps = 1/280 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C ++ + +A + ++ R P + T L+ G+ G + + M+
Sbjct: 308 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 367
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ RP +VTYN IDG C++G A L+++M P+ T + LI +
Sbjct: 368 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 427
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A DEM + + P+I YN++I R +++ + + +M ++ D +TY+T+
Sbjct: 428 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 487
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K + KL + M + K P T ML+ F V+ V ++ + +G
Sbjct: 488 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 547
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
P + ++ G + G +EAF+ +ML R ++ A+
Sbjct: 548 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587
>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
Japonica Group]
gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
Japonica Group]
gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
Length = 648
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/379 (26%), Positives = 165/379 (43%), Gaps = 13/379 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + L L R +D+AWE+ + P + +S +I++ + EE
Sbjct: 224 PGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDV---RSFTILIGGFCRVGEIEEA 280
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
L+ + M GI K F+ L+ F + +M A + +++ + F P+
Sbjct: 281 LKIYKEMRHR---GI-KPDLVSFSCLIGLFARRGKMDHAMA-YLREMRCFGLVPDGVIYT 335
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+++ GF +G ++ EMV G P VVTYN ++G CK+ DA L EM
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P L T TTLIHG + + +A QLFD M + L+PDI YN +I + R DL+ A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L D+M + I ++VTY + + +E D MI +P T ++K
Sbjct: 456 NDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKG 515
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C + V G ++ P + L+ G + +AF+ M + Q
Sbjct: 516 YCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPD 575
Query: 457 EASYRML-QRYLVQANANE 474
+Y ML + V N E
Sbjct: 576 VVTYNMLINGFSVHGNVQE 594
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/314 (24%), Positives = 141/314 (44%), Gaps = 1/314 (0%)
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKES 225
R +F + + N+++ +C E + +V ++ R P+ T N+++ +
Sbjct: 145 RLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRA 204
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
GD A MV +G +P +VTYN + G C+ G + A +F+EM+ P +++
Sbjct: 205 GDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSF 264
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
T LI G V I +A +++ EM R +KPD+ +++ +I R ++ AM + EM
Sbjct: 265 TILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRC 324
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ D V Y + G ++ + ++ D M+ +P T L+ C R+
Sbjct: 325 FGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLD 384
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L + +RG P L+ G C G+ ++A + ML +R + +Y L
Sbjct: 385 AEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLID 444
Query: 466 YLVQANANEKLEDL 479
+ + +K DL
Sbjct: 445 GMCRQGDLDKANDL 458
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C ++ + +A + ++ R P + T L+ G+ G + + M+
Sbjct: 369 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 428
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ RP +VTYN IDG C++G A L+++M P+ T + LI +
Sbjct: 429 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 488
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A DEM + + P+I YN++I R +++ + + +M ++ D +TY+T+
Sbjct: 489 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 548
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K + KL + M + K P T ML+ F V+ V ++ + +G
Sbjct: 549 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 608
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P + ++ G + G +EAF+ +ML R
Sbjct: 609 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 640
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C Q ++ +A ++ + SR PN+ T +IL+ E G V F EM+
Sbjct: 439 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 498
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYN I GYC+ G + ++M P L T TLIHG +H
Sbjct: 499 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 558
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + M K ++PD+ YN +I+ ++ A + ++M K I D TY +M
Sbjct: 559 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 618
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
G + + + +L+D M++ F P +
Sbjct: 619 NGHVTAGNSKEAFQLHDEMLQRGFAPDDK 647
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 103 PD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F +H D+A +L + QR P ++T ++ + R +
Sbjct: 399 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 458
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ D REIF +++L+ + C + ++++A +++++ PN T N
Sbjct: 459 WD--DMHSREIFPN-----HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G+ SG+V+ + F +M++ P ++TYN I GY K+ DA +L ME+
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T LI+G + N+ +A +F++M + ++PD Y +MI+ + + A
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 631
Query: 338 ELMDEMEEKRIGHDN 352
+L DEM ++ D+
Sbjct: 632 QLHDEMLQRGFAPDD 646
>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Cucumis sativus]
Length = 581
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 131/266 (49%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L++ F + +K+A V L + P+ + N ++ GF ++ + + + M RGF
Sbjct: 103 LIKGFFNSRNLKKAMRVMEILETYGDPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGF 162
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P VVTYNI I C +G A + +E+ + C PS+ T T LI L I++A +
Sbjct: 163 SPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALE 222
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
LFDE+ R L+PD+ YNA+I + + + A++ + + + D V+Y+ + +
Sbjct: 223 LFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFL 282
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S E +L M+ P T +L+ FC RV +N+ + ++G P +
Sbjct: 283 NKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSY 342
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQML 449
+ D L++ C GR + A E ++M+
Sbjct: 343 SYDPLISAFCKEGRLDLAIEYLEKMV 368
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 168/404 (41%), Gaps = 44/404 (10%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLT---LKSMSIMLSRISKFQ 153
F+P + + L + A+E+M + + PS++T L +I+ RI+
Sbjct: 162 FSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRIN--- 218
Query: 154 SYEETLEAFDRM-----------EREIFVGIRKFGSEE--------------------FN 182
E LE FD + I GI K G E+ +N
Sbjct: 219 ---EALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYN 275
Query: 183 VLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+LL++F + ++ + + LS PN T +IL+ F G V M +
Sbjct: 276 ILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEK 335
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P +Y+ I +CK+G A+ E+M CLP + T++ A
Sbjct: 336 GLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLA 395
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F+++ + P + AYN M S+L C + A+E++ EM K I D +TY+++
Sbjct: 396 LDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISC 455
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + ++ L M +F P + +++ C RV G+ L ++++G P+
Sbjct: 456 LCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPN 515
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ LL+ G+ G EA E + L R +S S + L +
Sbjct: 516 ETSYVLLIEGIAYAGWRAEAMELANS-LYRLGVISGDSSKRLNK 558
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 140/326 (42%), Gaps = 9/326 (2%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEAR 198
S + M+S SK + + FDRM R F + +N+++ + C++ +++ A
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRS------RGFSPDVVTYNIMIGSLCSRGKLELAF 186
Query: 199 SVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
V +LL P+ T IL+ G + + E+V RG RP + TYN I G
Sbjct: 187 EVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGI 246
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK+G A+ + C P + + L+ +L +M +P++
Sbjct: 247 CKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNV 306
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
++ +ISS R + A+ +++ M+EK + D+ +Y + K L+ + ++
Sbjct: 307 VTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEK 366
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M+ +P ++ C DL L+++ L + G P A + + + L S G
Sbjct: 367 MVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGN 426
Query: 438 WEEAFECSKQMLVRRRQVSEASYRML 463
+A E +M+ + E +Y L
Sbjct: 427 KIKALEMISEMIRKGIDPDEITYNSL 452
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 148/318 (46%), Gaps = 8/318 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+ +L++A + + EA +F +L+SR P+ T N ++ G KE + A++ H +
Sbjct: 204 YTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRH-L 262
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG P VV+YNI + + K + D RL ++M C P++ T + LI +
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRV 322
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A + + M ++ L PD +Y+ +IS+ + L+ A+E +++M D V Y+T+
Sbjct: 323 REAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTI 382
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV-VMLMKFFCVNFRVDLGLNLWGYLIDRG 417
L K + +++++ E P R M + ++ L + +I +G
Sbjct: 383 LATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK-ALEMISEMIRKG 441
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKL 476
P + L++ LC G +EA M R Q + S+ ++ + +A+ E +
Sbjct: 442 IDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGI 501
Query: 477 EDLDRMIKNLQAVLPPPT 494
E L M++ + LP T
Sbjct: 502 ELLITMVE--KGCLPNET 517
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 93/217 (42%), Gaps = 1/217 (0%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F +V +GF+P VV I G+ AMR+ E +E P + + +I G
Sbjct: 84 FLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFS 142
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
I A Q+FD M R PD+ YN MI SL L A E+MDE+ + +
Sbjct: 143 KANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVI 202
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + + + +L+D ++ P T +++ C D L+ +L
Sbjct: 203 TYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHL 262
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
RG P + ++L+ ++ RWE+ K M++
Sbjct: 263 SARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVL 299
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 4/229 (1%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G +++ E + P + T LI G RN+ +A ++ E+ + PD+
Sbjct: 73 CRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVM-EILETYGDPDV 131
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
+YNAMIS + +++A ++ D M + D VTY+ M L LE ++ D
Sbjct: 132 YSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDE 191
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+++ P T +L++ + R++ L L+ L+ RG P + + ++ G+C G
Sbjct: 192 LLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGM 251
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
+ A + + + R SY +L R + + + ED +R++K++
Sbjct: 252 EDRALDFVRHLSARGCNPDVVSYNILLRSFLNKS---RWEDGERLMKDM 297
>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 545
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 157/324 (48%), Gaps = 5/324 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S I+++ + K + R+ER IR +++++ C + EA +
Sbjct: 165 SYGILINGVCKIGETRAAIRLLRRIERW---SIRP-NVVIYSMIIDRLCKDTLVDEAYDL 220
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ +++ + +P+ T +IL+ GF G + +EMVL P + TY I +D CK
Sbjct: 221 YTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCK 280
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G +A + M + + +TL+ G LV ++ A+++F M + + PD+
Sbjct: 281 EGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHC 340
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y+ MI+ L + + ++ A+ L +E+ +K + D VTY ++ L KS + V L+D M+
Sbjct: 341 YSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEML 400
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P T L+ C N +D + L+ + D+ P+ + +L+ GLC GR +
Sbjct: 401 DRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLK 460
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
A E + +L + ++ +Y ++
Sbjct: 461 NALEFFQDLLTKGYCLNVRTYTVM 484
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/342 (23%), Positives = 156/342 (45%), Gaps = 9/342 (2%)
Query: 143 SIMLSRISKFQSYEETL--EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S+++ R+ K +TL EA+D + GI +++L+ FC ++ A +
Sbjct: 202 SMIIDRLCK-----DTLVDEAYDLYTEMVGKGISP-DVVTYSILVSGFCIVGQLNRAIDL 255
Query: 201 FVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ L P+ T IL+ + G V E MV VV Y+ +DGYC
Sbjct: 256 LNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCL 315
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+A R+F M ++ P + + +I+G ++ + +A LF+E+ ++N+ PD
Sbjct: 316 VNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVT 375
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y ++I L + ++ +L DEM ++ D +TY+ + L K+ L+ L+++M
Sbjct: 376 YTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMK 435
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P T +L+ C R+ L + L+ +G+C + +++ GLC G +
Sbjct: 436 DQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLD 495
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
EA +M ++ ++ R + N+K E L R
Sbjct: 496 EALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVR 537
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 159/371 (42%), Gaps = 10/371 (2%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQ 153
H H TP F K L L ++ + A L ++ P TL + I+ F
Sbjct: 51 HVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII------INCFC 104
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
+ + + AF + + + +G + + N L++ C + ++KEA K+L++ F +
Sbjct: 105 HFGQVVLAFSGVSKILKLGYQP-NTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSG 163
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ IL+ G + G+ A + RP+VV Y++ ID CK +A L+ E
Sbjct: 164 ISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTE 223
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P + T + L+ G +V +++A L +EM N+ PDI Y ++ +L +
Sbjct: 224 MVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGK 283
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A ++ M + + D V Y T+ G + + +++ M + P +
Sbjct: 284 VKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSI 343
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++ C RVD LNL+ + + P L+ LC GR ++ +ML R
Sbjct: 344 MINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRG 403
Query: 453 RQVSEASYRML 463
+ +Y L
Sbjct: 404 QPPDVITYNNL 414
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/354 (21%), Positives = 154/354 (43%), Gaps = 10/354 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + + L + D+A++L + + + P ++T + +S F +
Sbjct: 196 PNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSIL------VSGFCIVGQL 249
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NI 217
A D + + I + +L+ A C + ++KEA +V ++ + + +
Sbjct: 250 NRAIDLLNEMVLENINP-DIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYST 308
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +V + ++ M G P V Y+I I+G CK +A+ LFEE+ +
Sbjct: 309 LMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKN 368
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P T T+LI I LFDEM R PD+ YN +I +L + L+ A+
Sbjct: 369 MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAI 428
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L ++M+++ I + T+ + GL K L+ + + ++ + RT +++
Sbjct: 429 ALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGL 488
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C +D L L + D G ++++ + ++A + ++M+ R
Sbjct: 489 CKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIAR 542
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 82/199 (41%), Gaps = 29/199 (14%)
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
L N A F+ M + P +N ++ SL+ + A+ L +ME + D
Sbjct: 35 LTHNADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYF 94
Query: 354 TYHTMF-----FG--LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
T + + FG ++ SG+ + KL + P T T+ LMK C+ +V
Sbjct: 95 TLNIIINCFCHFGQVVLAFSGVSKILKL-------GYQPNTITLNTLMKGLCLEGKVKEA 147
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L ++ +GF G + +L+ G+C G A L+RR ++R+
Sbjct: 148 LRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIR-----LLRR----------IERW 192
Query: 467 LVQANANEKLEDLDRMIKN 485
++ N +DR+ K+
Sbjct: 193 SIRPNVVIYSMIIDRLCKD 211
>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 108/411 (26%), Positives = 186/411 (45%), Gaps = 25/411 (6%)
Query: 82 NGLKALEFFK----FT-LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHP 134
NGL L+F + FT + H P+ F + L ++A+M+ FD L +Q P
Sbjct: 56 NGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISP 115
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSE----EFNVLLQAFC 189
L T + + R S+ F+G + K G E F LL FC
Sbjct: 116 VLYTCNIVMNCVCRSSQ------------PCRASCFLGKMMKLGFEPDLVTFTSLLHGFC 163
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+++A ++F +++ F PN T L+ ++ + +++M G RP+VV
Sbjct: 164 HWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVV 223
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYN + G C+ G + DA L +M + P++ T T LI V I +A++L+ M
Sbjct: 224 TYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVM 283
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ ++ PD+ Y A+I+ L L+ A ++ ME + VTY T+ G KS +
Sbjct: 284 IQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRV 343
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
E K++ M + V T T +L++ +C+ R D+ ++ + R P ++L
Sbjct: 344 EDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVL 403
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ GLC G E+A K M R ++ +Y ++ + + + E DL
Sbjct: 404 LDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDL 454
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/353 (22%), Positives = 145/353 (41%), Gaps = 10/353 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
F P F LH + A L + P+++T ++ + + K +
Sbjct: 148 FEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTL---IHCLCKNRHLN 204
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+E F++M GIR +N L+ C +A + ++ R PN T
Sbjct: 205 HAVEIFNQMGDN---GIRP-NVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ F + G + + Y M+ P V TY I+G C G +A ++F ME
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES 320
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P+ T TTLIHG + + ++F EM ++ L + Y +I +
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV 380
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A E+ ++M +R D TY+ + GL + +E ++ M + + T ++++
Sbjct: 381 AQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQ 440
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C +V+ +L+ L +G P+ +++G C RG EA K+M
Sbjct: 441 GMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKM 493
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 119/274 (43%), Gaps = 13/274 (4%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER--EIFVGI 173
R+ D AW L ++R P+++T ++ ++ K +E + +M ++F
Sbjct: 237 RWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFT-- 294
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAME 232
+ L+ CT + EAR +F + S + PN T L+ GF +S V
Sbjct: 295 -------YTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGT 347
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
++EM +G + +TY + I GYC G A +F +M P ++T L+ G
Sbjct: 348 KIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGL 407
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A +F M KR + +I Y +I + + + A +L + K + +
Sbjct: 408 CYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNV 467
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+TY TM G + + L+ +M E F+P
Sbjct: 468 ITYTTMISGFCRRGFIHEADALFKKMKEDGFLPN 501
>gi|255578729|ref|XP_002530223.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223530270|gb|EEF32170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 517
Score = 126 bits (316), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/354 (25%), Positives = 168/354 (47%), Gaps = 12/354 (3%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
+P F+ LA M+ F A + + + + L T++S + LS + + L
Sbjct: 145 SPRVFDSLFKTLAHMKKFRNATDTFLQM-KGYGFLPTVESCNAYLSSLLDLHRVDIALAF 203
Query: 162 FDRMER---EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+ M R V R N++++AFC ++++A VF ++ S +PN+ + N
Sbjct: 204 YKEMRRCRISPNVYTR-------NMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNT 256
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L++G+ G + + + M +G +VVT+N IDG+CK+G +A ++F EM+ +
Sbjct: 257 LIMGYCRKGLLNSAVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLN 316
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P+ T TLI+G + N R+L++EM + +K DI YNA+I L + A
Sbjct: 317 VAPNTITYNTLINGHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAA 376
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ E++++ + + T+ + G + + +LY M+ P +T ML+ F
Sbjct: 377 YMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNMLVSAF 436
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C N + + + +R F P L + GLC G+ A + S ++ R
Sbjct: 437 CKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKEHLAMKLSSELKAR 490
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 168/398 (42%), Gaps = 21/398 (5%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+T L+ V+++L ++ H + +LEFF + + T + LHIL + R F
Sbjct: 54 STHLTPFRVKHILLKIQKDH---VLSLEFFNWVQTENPSSHTLETHSMILHILTKNRKFK 110
Query: 121 QAWELMSHV---------QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD--RMEREI 169
A ++ V + ++L M R+ F S +TL R +
Sbjct: 111 SAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRV--FDSLFKTLAHMKKFRNATDT 168
Query: 170 FVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKE 224
F+ ++ +G E N L + + A + + ++ R +PN T N+++ F +
Sbjct: 169 FLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRRCRISPNVYTRNMVMRAFCK 228
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG + + EM G P+ +YN I GYC+KG A++L M ++ T
Sbjct: 229 SGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNSAVKLKNSMRAKGVEANVVT 288
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+LI G +H+A ++F EM N+ P+ YN +I+ + + L +EM
Sbjct: 289 FNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLINGHSQMGNSEMGRRLYEEMS 348
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+ D +TY+ + GL K + + + + VP T L+ C+ D
Sbjct: 349 RNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVPNASTFSALISGQCIRNNSD 408
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L+ ++ G P+ ++LV+ C +E AF
Sbjct: 409 RAFQLYKSMVRIGCHPNEQTFNMLVSAFCKNEDFEGAF 446
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 175/403 (43%), Gaps = 24/403 (5%)
Query: 78 AAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ--AWELMSHVQRTHPS 135
AHS+ + + ++ K T H TP + HIL +++ D + E + VQ +PS
Sbjct: 37 VAHSHLIHS-DWKKLTSLSTHLTPF-----RVKHILLKIQK-DHVLSLEFFNWVQTENPS 89
Query: 136 LLTLKSMSIML---SRISKFQSYEETLEAF---------DRMEREIFVGIRKFGSEE--F 181
TL++ S++L ++ KF+S E L++ D++ I R S F
Sbjct: 90 SHTLETHSMILHILTKNRKFKSAELILKSVLVKGFIDLPDKLFEAILYSYRMCDSSPRVF 149
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ L + K+ + A F+++ F P ++ N L + V FY EM
Sbjct: 150 DSLFKTLAHMKKFRNATDTFLQMKGYGFLPTVESCNAYLSSLLDLHRVDIALAFYKEMRR 209
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
P+V T N+ + +CK G A+++FEEME V P+ + TLI G ++
Sbjct: 210 CRISPNVYTRNMVMRAFCKSGKLEKAVQVFEEMESVGISPNDTSYNTLIMGYCRKGLLNS 269
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L + M + ++ ++ +N++I + L+ A ++ EM+ + + +TY+T+
Sbjct: 270 AVKLKNSMRAKGVEANVVTFNSLIDGFCKEGKLHEASKVFSEMKVLNVAPNTITYNTLIN 329
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G + E +LY+ M T L+ C + + L P
Sbjct: 330 GHSQMGNSEMGRRLYEEMSRNGVKADILTYNALILGLCKEGKTKKAAYMVKELDKENLVP 389
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L++G C R + AF+ K M+ +E ++ ML
Sbjct: 390 NASTFSALISGQCIRNNSDRAFQLYKSMVRIGCHPNEQTFNML 432
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 66/164 (40%), Gaps = 12/164 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ C + + K+A + VK L + PN T + L+ G + Y M
Sbjct: 359 YNALILGLCKEGKTKKA-AYMVKELDKENLVPNASTFSALISGQCIRNNSDRAFQLYKSM 417
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P+ T+N+ + +CK F A + EM P ++ + HG
Sbjct: 418 VRIGCHPNEQTFNMLVSAFCKNEDFEGAFLVLMEMFERCFTPGSDVLSEIYHGLCCCGKE 477
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
H A +L E+ R++ M + + +NA E D+
Sbjct: 478 HLAMKLSSELKARHM---------MTKGFEKAKPINAGAERDDK 512
>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 85/326 (26%), Positives = 147/326 (45%), Gaps = 5/326 (1%)
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L I+K + Y + ++M+ G+ N+L+ C + A SV K+
Sbjct: 99 LGSIAKKKQYSTVVSLCNQMD---LFGVTH-NVYSLNILINCLCRLNHVVFAISVLGKMF 154
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ T N L+ G G++ ++EMV RG +P V++Y+ I+G CK G
Sbjct: 155 KLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTS 214
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A++L +ME C P+L TT+I ++ A L EM R + PD+ Y+ ++
Sbjct: 215 MALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTIL 274
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
LN A L +EM + + + VT+ + GL K + +++ M +
Sbjct: 275 HGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAE 334
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T LM +C+N ++D + ++D+G P H+ ++L+ G C R R +EA
Sbjct: 335 PNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSL 394
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
+M + +Y L + L Q
Sbjct: 395 LVEMSEKELTPDTVTYSTLMQGLCQV 420
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 133/284 (46%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ C + + EAR VF + + A PN T N L+ G+ + + + MV
Sbjct: 305 FTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMV 364
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V +YNI I+GYCK+ +A L EM P T +TL+ G V
Sbjct: 365 DKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQ 424
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM L PD+ Y+ ++ L + L+ A++L+ M+E +I D V Y+ +
Sbjct: 425 EALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILI 484
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + LE +L+ ++ P RT +++K D L+ + D GF
Sbjct: 485 EGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFL 544
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ + ++++ G A +M+ +R ++++ML
Sbjct: 545 PNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTFQML 588
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 141/305 (46%), Gaps = 2/305 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ +L FC+ + EA +F +++ R PN T IL+ G + G V+ + M
Sbjct: 270 YSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMT 329
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TYN +DGYC +A ++ + M C P + + LI+G R +
Sbjct: 330 KKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLD 389
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM ++ L PD Y+ ++ L + A+ L EM + D +TY T+
Sbjct: 390 EAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLL 449
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ KL M E K P +L++ + ++++ L+ L G
Sbjct: 450 DGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQ 509
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P +++ GL G +EA+E ++M + SY ++Q +L +++ +
Sbjct: 510 PTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRL 569
Query: 479 LDRMI 483
+D M+
Sbjct: 570 IDEMV 574
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 2/319 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ + C + +A + +++ R P+ T + +L GF G + + ++EMV
Sbjct: 235 YTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMV 294
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+ VT+ I +DG CK+G +A +FE M + P+ T L+ G L +
Sbjct: 295 GRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMD 354
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+++ D M + P + +YN +I+ + R L+ A L+ EM EK + D VTY T+
Sbjct: 355 EAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLM 414
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + + L+ M +P T L+ C + +D L L + +
Sbjct: 415 QGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIE 474
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++L+ G+ G+ E A E ++ Q + +Y ++ + L++ +++ +L
Sbjct: 475 PDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYEL 534
Query: 480 DRMIKNLQAVLPPPTRQQV 498
R +++ LP V
Sbjct: 535 FRKMED-DGFLPNSCSYNV 552
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 124/268 (46%), Gaps = 5/268 (1%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
R +F + K G+E +N L+ +C +M EA+ V ++ + AP + NIL+ G
Sbjct: 322 RCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILING 381
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ + + + EM + P VTY+ + G C+ G +A+ LF+EM LP
Sbjct: 382 YCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPD 441
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
L T +TL+ G ++ +A +L M + ++PDI YN +I + L A EL
Sbjct: 442 LMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFS 501
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
++ I TY M GL+K + +L+ +M + F+P + + ++++ F N
Sbjct: 502 KLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQ 561
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+ L ++ + F +L+
Sbjct: 562 DSSTAIRLIDEMVGKRFSADSSTFQMLL 589
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 118/249 (47%), Gaps = 1/249 (0%)
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
++M L G +V + NI I+ C+ A+ + +M ++ P T TLI+G +
Sbjct: 116 NQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIE 175
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I +A LF+EM +R +PD+ +Y+ +I+ L + + + A++L+ +MEEK + V Y
Sbjct: 176 GEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAY 235
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ L K + + L M++ P T ++ FC ++ L+ ++
Sbjct: 236 TTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVG 295
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE 474
R P+ +LV GLC G EA + M + + + +Y ++ Y + +E
Sbjct: 296 RNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDE 355
Query: 475 KLEDLDRMI 483
+ LD M+
Sbjct: 356 AQKVLDIMV 364
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/248 (22%), Positives = 109/248 (43%), Gaps = 8/248 (3%)
Query: 221 GFKESGDVT---AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
GF + ++ A+ FY M+ RPSVV + + KK + + L +M+
Sbjct: 64 GFLSNNSISIDDALASFYR-MLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFG 122
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC--RDLNA 335
++ ++ LI+ + ++ A + +M K ++PD +N +I+ RC ++
Sbjct: 123 VTHNVYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLING--RCIEGEIKE 180
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+ L +EM + D ++Y T+ GL KS +L +M E P ++
Sbjct: 181 AVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIID 240
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C + V+ ++L ++DRG P ++ G CS G EA +M+ R
Sbjct: 241 SLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMP 300
Query: 456 SEASYRML 463
+ ++ +L
Sbjct: 301 NTVTFTIL 308
>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 744
Score = 125 bits (315), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 105/441 (23%), Positives = 187/441 (42%), Gaps = 57/441 (12%)
Query: 97 PHFTPTPDAF-EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
P F+ + + F K+LH D A + + HP ++ + +L+ I+K + Y
Sbjct: 18 PFFSSSQNNFHSKSLHF----NTLDDALSSFNRLLHMHPPP-SIVDFAKLLTSIAKMKHY 72
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAP 210
L +M+ FG N+L+ +FC + A SV K+L P
Sbjct: 73 STVLSLSTQMD--------SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQP 124
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G G + + +M+ GF+P+VVTY I+G CK G A+RL
Sbjct: 125 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 184
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR- 329
ME+ C P + T++I R + +A LF +M + + PDI Y +++ +L
Sbjct: 185 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 244
Query: 330 --------------------------------CRD--LNAAMELMDEMEEKRIGHDNVTY 355
C++ + A E++D M ++ + D VTY
Sbjct: 245 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 304
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ G S ++ K++D M+ F P + L+ +C ++D + L+ +
Sbjct: 305 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 364
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ + P + L+ GLC GR ++A +M+ R + +Y +L L + N
Sbjct: 365 KEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK---NCH 421
Query: 476 LEDLDRMIKNLQAVLPPPTRQ 496
LE+ ++K ++A P Q
Sbjct: 422 LEEAMALLKAIEASNLNPDIQ 442
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 2/329 (0%)
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I S I + EAF+ + + GI + L+ A C E K ++ +
Sbjct: 198 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-DIFTYTSLVHALCNLCEWKHVTTLLNQ 256
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ S+ P+ + ++ + G VT M+ RG P VVTY +DG+C +
Sbjct: 257 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 316
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A+++F+ M R P + + TTLI+G + I +A LF+EM ++ PD YN
Sbjct: 317 MDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNT 376
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ L L A+ L EM + D VTY + L K+ LE L +
Sbjct: 377 LMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASN 436
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P + +++ C ++ +L+ L +G P ++++ GLC RG EA
Sbjct: 437 LNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEAN 496
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ +M +Y + R +Q N
Sbjct: 497 KLFMEMDGNDCSPDGCTYNTIARGFLQNN 525
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 5/243 (2%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+E ++ FD M R+ F + L+ +C ++ +A +F ++ + + P+ KT
Sbjct: 318 DEAVKVFDMMVRKGFAP----DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 373
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G G + +HEMV RG P +VTY+I +D CK +AM L + +E
Sbjct: 374 YNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIE 433
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P +Q +I G + AR LF + + L P + YN MI L + LN
Sbjct: 434 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 493
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A +L EM+ D TY+T+ G ++++ +L + M+ F T +L+
Sbjct: 494 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSADVSTTTLLV 553
Query: 395 KFF 397
+
Sbjct: 554 EML 556
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 168/424 (39%), Gaps = 45/424 (10%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H H P+ F K L +A+M+++ L + + P++ TL + I+
Sbjct: 47 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL------INS 100
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
F AF + + + +G + F L++ C + ++ EA +F K++ F P
Sbjct: 101 FCHLNRVGFAFSVLAKILKLG-HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 159
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T L+ G + G+ +A M +P VV Y ID CK +A LF
Sbjct: 160 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 219
Query: 271 EEMERVACLPSLQTITTLIHG---------------------------------AGLVR- 296
+M P + T T+L+H L +
Sbjct: 220 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 279
Query: 297 -NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A ++ D M +R ++PD+ Y ++ +++ A+++ D M K D ++Y
Sbjct: 280 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 339
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ G K ++ L++ M +++P T+T LM C R+ + L+ ++
Sbjct: 340 TTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVA 399
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
RG P +L+ LC EEA K + Y ++ + +A E
Sbjct: 400 RGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEA 459
Query: 476 LEDL 479
DL
Sbjct: 460 ARDL 463
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 92/384 (23%), Positives = 148/384 (38%), Gaps = 49/384 (12%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P + + L + R +A+ L S + Q P + T S+ L +
Sbjct: 186 SMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLC 245
Query: 151 KFQSYEETLEAF--DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+++ L ++ ++ + F+ ++ A C + ++ EA + ++ R
Sbjct: 246 EWKHVTTLLNQMVNSKILPDVVI---------FSTVVDALCKEGKVTEAHEIVDMMIQRG 296
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ T L+ G ++ + MV +GF P V++Y I+GYCK AM
Sbjct: 297 VEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAM 356
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR---------------- 311
LFEEM R +P +T TL+HG V + A LF EM R
Sbjct: 357 YLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSL 416
Query: 312 -------------------NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
NL PDI YN +I + R +L AA +L + K +
Sbjct: 417 CKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSV 476
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY+ M GL K L KL+ M P T + + F N + L
Sbjct: 477 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 536
Query: 413 LIDRGFCPHGHALDLLVTGLCSRG 436
++ RGF LLV L G
Sbjct: 537 MLARGFSADVSTTTLLVEMLSDDG 560
>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/424 (24%), Positives = 177/424 (41%), Gaps = 53/424 (12%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P ++ +H L++ +A +L+ V P + T + L +++K +
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH---D 306
Query: 158 TLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ DRM +R F + + LL C ++ EAR + +K+ PNN +
Sbjct: 307 ATKLVDRML------LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP---CPNNAIL 357
Query: 216 NILLLGFKESGDVTAMEMFYHE-MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G+ SG + + F +E M+ GF+P + TYNI + G CK+G A L EM
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 275 RVACLPSLQTITTLIHG---------AGLV--------------------------RNIH 299
R C P++ T L++G AGLV +H
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L EM + KPD+ YN++I L + ++ A L M +NVTY+T+
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L++ + L + M+ T L+K FC ++ GL L+ +I G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLED 478
+ ++++ GLC G+ + AFE + + R +Y + L + E L
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNL 657
Query: 479 LDRM 482
DR+
Sbjct: 658 FDRL 661
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 6/287 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ ++++L+ T + A +VF +LS+ +P T I++ +V + +
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ + Y I +K +A++L EEM + C+P +QT +IHG V
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
IH A +L D M R PD Y ++ L R LN A +++ ++ +N +T
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCP----NNAILNT 359
Query: 358 MFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + S L E L + MI F P T +LM C + +L + R
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P+ +LV GLC G EEA +M R ++ Y L
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + EA +F LL NN T N L+ G ++M+
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +TYN I +CK G + L+E+M + +I+G V +
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + + R PDI YN++++ L + + A+ L D ++ + + D TY+T
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
K + C + R IE FVP T
Sbjct: 678 SWQCKEGMVNDACLFFYRGIENGFVPSNLT 707
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ +Y++ ++ C A +F +M P++ T ++ + + A L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+M K P+ Y +I +L + ++ A++L++EM D T++ + GL K
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ + KL DRM+ F P T L+ C R+ LN ++ + CP+
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLC---RIG-KLNEARKILIKIPCPNNAI 356
Query: 425 LDLLVTGLCSRGRWEEA 441
L+ L+ G G+ +EA
Sbjct: 357 LNTLINGYVMSGQLKEA 373
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+ +H L R F +A L++ + +L + + + ++ K + E+ LE +++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVGNIEKGLELYEQ 590
Query: 165 MEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
M I G+ G++ N+++ C ++ A ++R F P+ T N +L G
Sbjct: 591 M---IMDGL---GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G + + + + G RP TYN I CK+G DA F +PS
Sbjct: 645 LCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPS 704
Query: 282 LQTITTLIHGAGLVRNIHQARQLF--DEM 308
T L++ L++ +Q F DE+
Sbjct: 705 NLTWNVLVY--TLLKQSNQENNFFVLDEL 731
>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
Length = 553
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 33/458 (7%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ L Q+ + + NVL + AL+ L + P + L L
Sbjct: 114 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV----LDRMNVAPDVVTYNTILRTL 169
Query: 114 ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
QA E++ + +P ++T +I++ K + ++ D M
Sbjct: 170 CDSGKLKQAMEVLDRQLQKECYPDVIT---YTILIEATCKESGVGQAMKLLDEM------ 220
Query: 172 GIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGF 222
R GS+ +NVL+ C + + EA +K L+ PN T NI+L
Sbjct: 221 --RNKGSKPDVVTYNVLINGICKEGRLDEA----IKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+G E +M+ +G PSVVT+NI I+ C++G G A+ + E+M C P+
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ L+HG + + +A + D M R PDI YN ++++L + ++ A+E++++
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 394
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ K +TY+T+ GL K E KL D M P T L+ +
Sbjct: 395 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 454
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD + + L G P+ + ++ GLC + + A + M+ +R + +EA+Y +
Sbjct: 455 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 514
Query: 463 LQRYLV-QANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
L + + A E L+ L+ + + ++ + +QVA
Sbjct: 515 LIEGIAYEGLAKEALDLLNELCS--RGLVKKSSAEQVA 550
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF G + G P V+TYN+ I GYCK G +A+++ + M VA
Sbjct: 98 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN-VA 156
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T T++ + QA ++ D ++ PD+ Y +I + + + AM
Sbjct: 157 --PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 214
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+DEM K D VTY+ + G+ K L+ K + M P T ++++
Sbjct: 215 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 274
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C R L ++ +G P ++L+ LC +G A + ++M + +
Sbjct: 275 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 334
Query: 458 ASYR-MLQRYLVQANANEKLEDLDRMI 483
SY +L + + + +E LD M+
Sbjct: 335 LSYNPLLHGFCKEKKMDRAIEYLDIMV 361
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G D + E M +P + T+LI G + +A + + + + PD+
Sbjct: 69 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 128
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +IS + +++ A++++D M + D VTY+T+ L S L+ ++ DR
Sbjct: 129 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 185
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
++ + P T +L++ C V + L + ++G P ++L+ G+C GR
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245
Query: 439 EEAFE 443
+EA +
Sbjct: 246 DEAIK 250
>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
Length = 745
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 143/307 (46%), Gaps = 5/307 (1%)
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
FD M+R+ G+ G + ++ C E++EA + ++ +R + T +L+
Sbjct: 384 FDEMQRK---GLATDGVT-YTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G + ++ MV RG P+VVTY DG CK+G A L EM
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T +LI+G + QA + +M LKPD+ Y +I +L + DL+ A L+
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM +K I VTY+ + G S +EG KL D M+E P T LMK +C+
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ + R P+ + ++L+ G C +EA +M+ + +++ SY
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679
Query: 461 RMLQRYL 467
L R L
Sbjct: 680 SALIRLL 686
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 137/310 (44%), Gaps = 8/310 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N+LL+A C +K+AR +F ++ S AP+ T IL+ G G++ EMV
Sbjct: 262 YNILLKALCDAGRVKDARQLFDEMAS--APDVVTYGILIHGHCALGELENAVKLLDEMVA 319
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+ Y + C KG DA+R+ E+M + + TT++ G ++
Sbjct: 320 GGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVS 379
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+ FDEM ++ L D Y MI+ L R +L A +L+ EM +R+ D VTY +
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K + ++++ M++ P T L C V L + ++G
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
+ + L+ GLC G E+A M + +Y L L ++ DLD
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSG------DLD 553
Query: 481 RMIKNLQAVL 490
R LQ +L
Sbjct: 554 RAHSLLQEML 563
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 5/288 (1%)
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
LE +++ +E++ R+ +E + VL+ +C + +M EA + ++ R PN T
Sbjct: 412 LEEAEKLLQEMWA--RRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTY 469
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L G + GDV A HEM +G + TYN I+G CK G AMR +M+
Sbjct: 470 TALTDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDT 529
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T TTLI ++ +A L EM + +KP I YN +++ +
Sbjct: 530 ACLKPDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEG 589
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+L+D M EK I + TY+++ + ++ ++Y M P T +L+K
Sbjct: 590 GKKLLDWMLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIK 649
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C + L +I +GF + L+ L + ++ EA E
Sbjct: 650 GHCKARNMKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARE 697
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 112/274 (40%), Gaps = 42/274 (15%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+V +YNI + C G DA +LF+EM A P + T LIHG + + A +L
Sbjct: 258 NVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVTYGILIHGHCALGELENAVKLL 314
Query: 306 DEMPKRNLKPDIGAYNAM---------ISSLIR------------------------CR- 331
DEM ++P+ Y ++ IS +R C
Sbjct: 315 DEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNK 374
Query: 332 -DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
DL +A DEM+ K + D VTY TM GL ++ LE KL M + T
Sbjct: 375 GDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTY 434
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+L+ +C ++ + ++ RG P+ L GLC +G + A E +M
Sbjct: 435 TVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSN 494
Query: 451 RRRQVSEASYRMLQRYLVQAN----ANEKLEDLD 480
+ +++ +Y L L +A A + D+D
Sbjct: 495 KGLELNACTYNSLINGLCKAGYLEQAMRTMADMD 528
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 49/205 (23%), Positives = 87/205 (42%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A C ++ A S+ ++L + P T N+L+ GF SG V + M+
Sbjct: 539 YTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWML 598
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ TYN + YC + +++ M P+ T LI G RN+
Sbjct: 599 EKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMK 658
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A DEM ++ + +Y+A+I L + + A EL +M ++ + ++ Y
Sbjct: 659 EALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
LE L D ++E V
Sbjct: 719 DLNFNEDNLESTLALCDELVEASIV 743
>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 550
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 85/329 (25%), Positives = 151/329 (45%), Gaps = 5/329 (1%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
LL + +++ + K E E +ME ++ + +N+++ C +
Sbjct: 180 LLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVV----RPNVVIYNMIVDGLCKDGLVT 235
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EAR ++ ++ R P+ T L+ GF G + +MV R +V TYNI I
Sbjct: 236 EARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILI 295
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D CKKG G A + M P L T TL+ G L ++ +AR+LFD + +
Sbjct: 296 DALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGIT 355
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ +YN +I + ++ A+ L ++M K++ + VTY ++ GL KS + +L
Sbjct: 356 PDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWEL 415
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ + +G P T +++ C VD + L+ + +RG P+ + ++L+ G C
Sbjct: 416 FSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCK 475
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
R +EA ++M R +Y L
Sbjct: 476 SKRIDEAMNLFEEMHRRNLVPDSVTYNCL 504
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 127/284 (44%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC + +E + ++ R N T NIL+ + G + + M+
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG RP +VT+N + GYC +A +LF+ P + + LI G I
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF++M + L P+I Y+++I L + ++ A EL + + + +TY+ M
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K ++ +L++ M E P + +L+ +C + R+D +NL+ + R
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC GR A+E M V +Y +L
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNIL 539
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/362 (24%), Positives = 153/362 (42%), Gaps = 45/362 (12%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A L + + HP L ++ +++L I K + Y + +M G+R
Sbjct: 60 DDAVALFTRLITMHP-LPSVVEFNMILGSIVKMKHYPTAISLSKQM------GLRGITPS 112
Query: 180 --EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++L+ +C M A SV +L R + N T+ ++ G +G+V F+
Sbjct: 113 IVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHD 172
Query: 237 EMVLRGF-----------------------------------RPSVVTYNIRIDGYCKKG 261
+V +GF RP+VV YN+ +DG CK G
Sbjct: 173 SVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDG 232
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A L+ ++ P + T T LIHG + + +L +M RN+ ++ YN
Sbjct: 233 LVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYN 292
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I +L + L A ++ + M E+ D VT++T+ G + + KL+D E
Sbjct: 293 ILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAEC 352
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P + +L+ +C N R+D L+L+ + + P+ L+ GLC GR A
Sbjct: 353 GITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYA 412
Query: 442 FE 443
+E
Sbjct: 413 WE 414
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 113/231 (48%), Gaps = 16/231 (6%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFC 189
P L+T ++ +S + Y + +EA R++F + G +N+L+ +C
Sbjct: 321 PDLVTFNTL------MSGYCLYNDVVEA-----RKLFDTFAECGITPDVWSYNILIIGYC 369
Query: 190 TQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ EA S+F K+ + APN T + L+ G +SG ++ + + G P+V+
Sbjct: 370 KNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVI 429
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYNI +D CK A+ LF M P++ + LI+G + I +A LF+EM
Sbjct: 430 TYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEM 489
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+RNL PD YN +I L + ++ A EL + M + D +TY+ +F
Sbjct: 490 HRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILF 540
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/317 (21%), Positives = 126/317 (39%), Gaps = 47/317 (14%)
Query: 175 KFGSEEFNVLLQAFC-TQKEMKEARSVF------VKLLSRFA-----PNNKTMNILLLGF 222
++ +F+V L+ F +QK+ + +S F V L +R P+ N++L
Sbjct: 29 RYAISKFSVFLRFFSDSQKQNAKKKSGFDAIDDAVALFTRLITMHPLPSVVEFNMILGSI 88
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ +M LRG PS+VT +I I+ YC G G A + + + +
Sbjct: 89 VKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNA 148
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T+TT++ G + + +A + D + + D Y +I+ L + A EL+ +
Sbjct: 149 ITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHK 208
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
ME + + + V Y+ + ++G+CK V + R
Sbjct: 209 MEGQVVRPNVVIYNMI---------VDGLCK-------DGLVTEAR-------------- 238
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+L+ ++ RG P L+ G C G+W E M+ R ++ +Y +
Sbjct: 239 -----DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNI 293
Query: 463 LQRYLVQANANEKLEDL 479
L L + K D+
Sbjct: 294 LIDALCKKGMLGKAHDM 310
>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
Length = 799
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
FD M++ G+ G + L+ C E+KEA V ++ + + T +L+
Sbjct: 378 FDEMQKR---GLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G +T + +++MV + P+VVTY DG CK+G A L EM
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T +LI+G N+ QA + +M + LKPD+ Y +I +L + ++L+ A L+
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM +K I VTY+ + G S +EG +L + M+E P T T LMK +C+
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ ++ + P+ + ++L+ G C +EA +M+ + +++ +SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 461 RMLQRYLVQANANEKLEDLDRMIKNLQ 487
L R L N +K + R+ + ++
Sbjct: 674 NALIRLL---NKKKKFTEARRLFEKMR 697
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 2/275 (0%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
++F + + + +N+LL+A CT +K+A +F ++ S P+ T I++ G+ +
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSE 300
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ EM RG + V Y I C +G DA+R+ E+M + TT
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G ++ AR FDEM KR L D Y A+I+ L R +L A ++ EME+K
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D VTY + G K + ++++M++ + P T L C V
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L + +G + + L+ GLC G E+A
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ +A R V ++ + ++ GF GD+ A ++ EM
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VTY I+G C+ G +A R+ +EME T T LI G V +
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + ++M ++ + P++ Y A+ L + D+ AA EL+ EM K + + TY+++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE + M E P T ++ C + +D +L ++D+G
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P ++L+ G C GR E + ML + + +Y ++++Y ++ N E
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 479 LDRMIKNLQAVLP 491
M+ Q V+P
Sbjct: 623 YKGMLS--QEVVP 633
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 88/205 (42%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ A C KE+ A S+ ++L + P T N+L+ GF SG V + M+
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ TYN + YC + +++ M +P+ T LI G RN+
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A EM ++ + +YNA+I L + + A L ++M + R+ + Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKDRLTAEPDVYNFYI 712
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
LE L D ++E V
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLV 737
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 28/194 (14%)
Query: 298 IHQARQLFDEMPKRNL----------------------------KPDIGAYNAMISSLIR 329
+ +A QLF E+P++N PD+ Y M+
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+L A++L+ EM + + + V Y ++ L + ++ + M+ V
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+M FC + N + + RG G L+ GLC G +EA ++M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 450 VRRRQVSEASYRML 463
+ V +Y +L
Sbjct: 418 DKGLDVDAVTYTVL 431
>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Cucumis sativus]
Length = 732
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 164/384 (42%), Gaps = 52/384 (13%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P ++ +H L++ +A +L+ V P + T + L +++K +
Sbjct: 250 VPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIH---D 306
Query: 158 TLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ DRM +R F + + LL C ++ EAR + +K+ PNN +
Sbjct: 307 ATKLVDRML------LRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP---CPNNAIL 357
Query: 216 NILLLGFKESGDVTAMEMFYHE-MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G+ SG + + F +E M+ GF+P + TYNI + G CK+G A L EM
Sbjct: 358 NTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMS 417
Query: 275 RVACLPSLQTITTLIHG---------AGLV--------------------------RNIH 299
R C P++ T L++G AGLV +H
Sbjct: 418 RRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVH 477
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L EM + KPD+ YN++I L + ++ A L M +NVTY+T+
Sbjct: 478 VALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLI 537
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L++ + L + M+ T L+K FC ++ GL L+ +I G
Sbjct: 538 HALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLG 597
Query: 420 PHGHALDLLVTGLCSRGRWEEAFE 443
+ ++++ GLC G+ + AFE
Sbjct: 598 ADTISCNIMINGLCKVGKVDNAFE 621
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 125/287 (43%), Gaps = 6/287 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ ++++L+ T + A +VF +LS+ +P T I++ +V + +
Sbjct: 184 KSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSLLRD 243
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ + Y I +K +A++L EEM + C+P +QT +IHG V
Sbjct: 244 MTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNK 303
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
IH A +L D M R PD Y ++ L R LN A +++ ++ +N +T
Sbjct: 304 IHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIP----CPNNAILNT 359
Query: 358 MFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + S L E L + MI F P T +LM C + +L + R
Sbjct: 360 LINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRR 419
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P+ +LV GLC G EEA +M R ++ Y L
Sbjct: 420 GCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 87/210 (41%), Gaps = 1/210 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + EA +F LL NN T N L+ G ++M+
Sbjct: 498 YNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVNDML 557
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +TYN I +CK G + L+E+M + +I+G V +
Sbjct: 558 FRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVD 617
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + + R PDI YN++++ L + + A+ L D ++ + + D TY+T
Sbjct: 618 NAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFI 677
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
K + C + R IE FVP T
Sbjct: 678 SWQCKEGMVNDACSFFYRGIENGFVPSNLT 707
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 87/197 (44%), Gaps = 4/197 (2%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ +Y++ ++ C A +F +M P++ T ++ + + A L
Sbjct: 181 PTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNEVDSACSL 240
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+M K P+ Y +I +L + ++ A++L++EM D T++ + GL K
Sbjct: 241 LRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCK 300
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ + KL DRM+ F P T L+ C R+ LN ++ + CP+
Sbjct: 301 VNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLC---RIG-KLNEARKILIKIPCPNNAI 356
Query: 425 LDLLVTGLCSRGRWEEA 441
L+ L+ G G+ +EA
Sbjct: 357 LNTLINGYVMSGQLKEA 373
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 14/209 (6%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+ +H L R F +A L++ + +L + + + ++ K + E+ LE +++
Sbjct: 532 TYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKI-TYNGLIKAFCKVGNIEKGLELYEQ 590
Query: 165 MEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
M I G+ G++ N+++ C ++ A ++R F P+ T N +L G
Sbjct: 591 M---IMDGL---GADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNG 644
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G + + + + G RP TYN I CK+G DA F +PS
Sbjct: 645 LCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPS 704
Query: 282 LQTITTLIHGAGLVRNIHQARQLF--DEM 308
T L++ L++ +Q F DE+
Sbjct: 705 NLTWNVLVY--TLLKQSNQENNFFVLDEL 731
>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
Length = 610
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/423 (24%), Positives = 192/423 (45%), Gaps = 10/423 (2%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
++ LV ++L R + + E F+ L+ + + +A L L ++ + + AWE
Sbjct: 46 TNNLVFDLLIRTYVQARKLREGTEAFRI-LRSKGYLVSINACNSLLGGLVKIDWVELAWE 104
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNV 183
+ V R+ L + +++IM++ + K +++ ME I+ + + N
Sbjct: 105 VHREVVRSGIEL-NVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTY-----NT 158
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ A+C + ++EA + + + P+ T N ++ G + G + EM+ G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P TYN + C++ F +A +F EM R +P L + ++LI R++ QA
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
F +M K L PD Y ++ R ++ A+++ DEM E+ D + Y+T+ GL
Sbjct: 279 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 338
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K L KL+D M+E +P T L+ C + + L+L+G + R P
Sbjct: 339 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 398
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDR 481
A + L+ G C G E+A E M+ R+ + +Y +L Y + +E D
Sbjct: 399 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 458
Query: 482 MIK 484
MI+
Sbjct: 459 MIE 461
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 127/264 (48%), Gaps = 3/264 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
F+ L+ F + + +A V+ + + +F P+N +L+ G+ +G++ EM
Sbjct: 261 FSSLIAVFSRNRHLDQAL-VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 319
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +G V+ YN ++G CK+ DA +LF+EM LP T TTLIHG N+
Sbjct: 320 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNM 379
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A LF M +RN+KPDI AYN +I + ++ A EL D M ++I +++TY +
Sbjct: 380 TKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 439
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ +L+D MIE P T ++K +C + G +I +G
Sbjct: 440 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 499
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF 442
P + + L+ G ++AF
Sbjct: 500 APDHISYNTLINGFVREDNMDKAF 523
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/396 (23%), Positives = 175/396 (44%), Gaps = 17/396 (4%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P TT ++ LVE+ N +A E F L+ P +F + + +R R+
Sbjct: 221 PDTTTYNTLLVES------CRRDNFSEAKEIFGEMLRQG-VVPDLVSFSSLIAVFSRNRH 273
Query: 119 FDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
DQA +++ P + ++++ + + E L+ D M + V
Sbjct: 274 LDQALVYFRDMKKFGLVPDNVIY---TVLMHGYCRNGNMLEALKIRDEMLEQGCV----L 326
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFY 235
+N +L C +K + +A +F +++ R A P+ T L+ G + G++T +
Sbjct: 327 DVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLF 386
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M R +P +V YN IDG+CK G A L++ M P+ T LI+ V
Sbjct: 387 GTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSV 446
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
++ +A +L+D M ++ +KP + N +I R D + A E + M K + D+++Y
Sbjct: 447 GHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISY 506
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G ++ ++ ++M + +P T ++M FC R+ + +I+
Sbjct: 507 NTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIE 566
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+G P L+ G ++ EAF +ML R
Sbjct: 567 KGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQR 602
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 136/296 (45%), Gaps = 1/296 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C + EA+ +F ++L + P+ + + L+ F + + +++ +M
Sbjct: 226 YNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMK 285
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V Y + + GYC+ G +A+++ +EM C+ + T+++G + +
Sbjct: 286 KFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLT 345
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LFDEM +R PD + +I + ++ A+ L M ++ I D V Y+T+
Sbjct: 346 DADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLI 405
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K +E +L+D MI K P T +L+ +C V LW +I++G
Sbjct: 406 DGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIK 465
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
P + ++ G C G +A E +M+ + SY L V+ + +K
Sbjct: 466 PTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDK 521
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 109/241 (45%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ C M +A S+F + R P+ N L+ GF + G++ + M+
Sbjct: 366 FTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMI 425
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+ +TY I I+ YC G +A RL++ M P+L T T+I G +
Sbjct: 426 SRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSS 485
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + M + + PD +YN +I+ +R +++ A +++ME++ + D +TY+ +
Sbjct: 486 KADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVM 545
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + ++ + +MIE P T L+ ++ ++ RGF
Sbjct: 546 NGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFA 605
Query: 420 P 420
P
Sbjct: 606 P 606
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 102/215 (47%), Gaps = 7/215 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ + ++ K E+ E +D M R+IF +G +L+ A+C+ + EA
Sbjct: 400 AYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYG-----ILINAYCSVGHVSEAFR 454
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ ++ + P T N ++ G+ SGD + + F M+ +G P ++YN I+G+
Sbjct: 455 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFV 514
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
++ A +ME+ LP + T +++G + +A + +M ++ + PD
Sbjct: 515 REDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRS 574
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
Y A+I+ + +LN A DEM ++ D+V
Sbjct: 575 TYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609
>gi|449494995|ref|XP_004159705.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 488
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 113/491 (23%), Positives = 218/491 (44%), Gaps = 20/491 (4%)
Query: 4 AKRLKRSDKFPGISDRLAL-LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTT 62
A+ ++ P ++D L L + S+I+ I + D+ L + +
Sbjct: 10 AQNSRKPTLLPAVADNLLRRLIDRKKKKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSI 69
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
LS LV +L R + AL F++ F TPD ++ + L + + +
Sbjct: 70 QLSHDLVYKLLQRF---KDDWKSALGVFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKM 126
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
++ ++ L+TL +++ + R + +E + FD +E G+ K +E N
Sbjct: 127 RGMLEEMKEAR--LVTLDTVAKAMRRFAGAGQWENAVRIFDDLET---YGLEK-NTESMN 180
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
VLL C +K++++AR ++++L S APN T N+ + G+ + + EM G
Sbjct: 181 VLLDTLCKEKKVEKARQMYLELKSHIAPNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYG 240
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
RP V++Y+ I YC + F L +EM+ C ++ T TT++ +A
Sbjct: 241 HRPCVISYSTIILFYCHRCNFNKVYELLDEMDAQGCPANVITYTTIMCSLTKSEEFEEAL 300
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMFFG 361
Q+ + M +PD YN +I +L R + A+ + + EM K + + TY++M
Sbjct: 301 QIAERMKSAGYEPDTLFYNCLIHTLGRAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAM 360
Query: 362 LMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ + E KL + M + + P +T L+K + D L+ L+D
Sbjct: 361 YCRRAREEKAMKLLEEMQKSEHCKPDVQTYYPLLKSCFRTGKTDYDLS---NLLDEMINK 417
Query: 421 HGHALD-----LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
H +LD LL+ GLC + + A++ ++M+ + + + ++L Q N +
Sbjct: 418 HHLSLDISTYSLLIHGLCRANKCDWAYQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGV 477
Query: 476 LEDLDRMIKNL 486
+ ++ ++K L
Sbjct: 478 ADRIEGIMKKL 488
>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like isoform 1 [Vitis vinifera]
Length = 610
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 109/458 (23%), Positives = 200/458 (43%), Gaps = 33/458 (7%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ L Q+ + + NVL + AL+ L + P + L L
Sbjct: 171 VMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV----LDRMNVAPDVVTYNTILRTL 226
Query: 114 ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
QA E++ + +P ++T +I++ K + ++ D M
Sbjct: 227 CDSGKLKQAMEVLDRQLQKECYPDVIT---YTILIEATCKESGVGQAMKLLDEM------ 277
Query: 172 GIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGF 222
R GS+ +NVL+ C + + EA +K L+ PN T NI+L
Sbjct: 278 --RNKGSKPDVVTYNVLINGICKEGRLDEA----IKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+G E +M+ +G PSVVT+NI I+ C++G G A+ + E+M C P+
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ L+HG + + +A + D M R PDI YN ++++L + ++ A+E++++
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 451
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ K +TY+T+ GL K E KL D M P T L+ +
Sbjct: 452 LSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGK 511
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD + + L G P+ + ++ GLC + + A + M+ +R + +EA+Y +
Sbjct: 512 VDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTI 571
Query: 463 L-QRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
L + + A E L+ L+ + + ++ + +QVA
Sbjct: 572 LIEGIAYEGLAKEALDLLNELCS--RGLVKKSSAEQVA 607
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 117/267 (43%), Gaps = 4/267 (1%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF G + G P V+TYN+ I GYCK G +A+++ + M VA
Sbjct: 155 LIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQVLDRMN-VA 213
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T T++ + QA ++ D ++ PD+ Y +I + + + AM
Sbjct: 214 --PDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQAM 271
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+DEM K D VTY+ + G+ K L+ K + M P T ++++
Sbjct: 272 KLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSM 331
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C R L ++ +G P ++L+ LC +G A + ++M + +
Sbjct: 332 CSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNS 391
Query: 458 ASYR-MLQRYLVQANANEKLEDLDRMI 483
SY +L + + + +E LD M+
Sbjct: 392 LSYNPLLHGFCKEKKMDRAIEYLDIMV 418
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 87/185 (47%), Gaps = 3/185 (1%)
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G D + E M +P + T+LI G + +A + + + + PD+
Sbjct: 126 RNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVI 185
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +IS + +++ A++++D M + D VTY+T+ L S L+ ++ DR
Sbjct: 186 TYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAMEVLDRQ 242
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
++ + P T +L++ C V + L + ++G P ++L+ G+C GR
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302
Query: 439 EEAFE 443
+EA +
Sbjct: 303 DEAIK 307
>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
Length = 799
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
FD M++ G+ G + L+ C E+KEA V ++ + + T +L+
Sbjct: 378 FDEMQKR---GLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G +T + +++MV + P+VVTY DG CK+G A L EM
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T +LI+G N+ QA + +M + LKPD+ Y +I +L + ++L+ A L+
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM +K I VTY+ + G S +EG +L + M+E P T T LMK +C+
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ ++ + P+ + ++L+ G C +EA +M+ + +++ +SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 461 RMLQRYLVQANANEKLEDLDRMIKNLQ 487
L R L N +K + R+ + ++
Sbjct: 674 NALIRLL---NKKKKFTEARRLFEKMR 697
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 119/262 (45%), Gaps = 2/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N+LL+A CT +K+A +F ++ S P+ T I++ G+ ++ EM
Sbjct: 256 YNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSELETAIKLLSEMAA 313
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG + V Y I C +G DA+R+ E+M + TT++ G ++
Sbjct: 314 RGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAA 373
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR FDEM KR L D Y A+I+ L R +L A ++ EME+K + D VTY +
Sbjct: 374 ARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K + ++++M++ + P T L C V L + +G
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 421 HGHALDLLVTGLCSRGRWEEAF 442
+ + L+ GLC G E+A
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAM 515
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ +A R V ++ + ++ GF GD+ A ++ EM
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VTY I+G C+ G +A R+ +EME T T LI G V +
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + ++M ++ + P++ Y A+ L + D+ AA EL+ EM K + + TY+++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE + M E P T ++ C + +D +L ++D+G
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P ++L+ G C GR E + ML + + +Y ++++Y ++ N E
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 479 LDRMIKNLQAVLP 491
M+ Q V+P
Sbjct: 623 YKGMLS--QEVVP 633
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ A C KE+ A S+ ++L + P T N+L+ GF SG V + M+
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ TYN + YC + +++ M +P+ T LI G RN+
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A EM ++ + +YNA+I L + + A L ++M ++R+ + Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
LE L D ++E V
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLV 737
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 28/194 (14%)
Query: 298 IHQARQLFDEMPKRNL----------------------------KPDIGAYNAMISSLIR 329
+ +A QLF E+P++N PD+ Y M+
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+L A++L+ EM + + + V Y ++ L + ++ + M+ V
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+M FC + N + + RG G L+ GLC G +EA ++M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 450 VRRRQVSEASYRML 463
+ V +Y +L
Sbjct: 418 DKGLDVDAVTYTVL 431
>gi|356560497|ref|XP_003548528.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Glycine max]
Length = 490
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 107/462 (23%), Positives = 194/462 (41%), Gaps = 53/462 (11%)
Query: 24 FSTTTQSSE-----IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFA 78
FS Q E ++ +T + ++ LH PLS LV +L R
Sbjct: 28 FSHKEQCEEDLTRYVDILTAKLGKGSSEEETLHTLFNDQACDFIPLSRDLVHRLLWRY-- 85
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT 138
+ AL F++ P F + ++++ + IL RM+ ++ +L+ ++ L+
Sbjct: 86 -KDDWKSALGVFRWASSRPSFRHSSESYDMMVDILGRMKVMEKLRDLLEEMRE--GGLVN 142
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ +++ + R + + + FD ++ +G+ K +E N+LL C +K +++AR
Sbjct: 143 MNTVAKAMRRFVGAGQWVDAVRIFDDLQA---LGLEK-NTESMNLLLDTLCKEKFVQQAR 198
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F++L APN T NI + G+ + V EM GF P V++Y+ I YC
Sbjct: 199 EIFLELKQHIAPNAHTFNIFIHGWCKICRVDEAHWTIQEMKGYGFHPCVISYSTLIQCYC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTIT-------------------------------- 286
++G F L +EM+ C ++ T T
Sbjct: 259 QEGNFSRVYELLDEMQAQGCSANVITYTSIMCALGKAKKFEEALKVPERMRSSGCRPDTL 318
Query: 287 ---TLIHGAGLVRNIHQARQLFD-EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+LIH G + A +F EMPK + P+ YN+MIS A+E++ E
Sbjct: 319 FFNSLIHTLGRAGRLDDAADVFKVEMPKAGVSPNTSTYNSMISMFCYHAQEKRALEILKE 378
Query: 343 MEEK-RIGHDNVTYHTMFFGLMKSSGLEGV-CKLYDRMIEGKFVP-KTRTVVMLMKFFCV 399
ME D TYH + +S ++GV ++ + MI + + T +L+ C
Sbjct: 379 MENSGGCKPDAQTYHPLIKSCFRSGKIDGVLSEILNDMINKQHLSLDLSTYTLLIHGLCR 438
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
R + +L+ +ID+ P LL+ + + ++ A
Sbjct: 439 EDRCNWAFSLFEEMIDQDIIPRYRTCRLLLDEVKQKNMYQAA 480
>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
Length = 721
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 134/285 (47%), Gaps = 3/285 (1%)
Query: 181 FNVLLQAF--CTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N ++ C Q E + + ++ + P+ T N LL + ++G++ ++
Sbjct: 346 YNAIIHGLLKCEQAEAAQVKFAEMRAMG-LLPDVITYNSLLNRYCKAGNLKEALWLLGDL 404
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P+V+TYN IDGYC+ G +A RL EEM C P + T T L++G+ VRN+
Sbjct: 405 RRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNL 464
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
AR+ FDEM + L+PD AYN I + + A +L + M K I D VTY+ +
Sbjct: 465 AMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVI 524
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ L+ +L +M+ P T L+ C + L ++ G
Sbjct: 525 IDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGL 584
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P +LV C RG A+ ++ML + +E +Y +L
Sbjct: 585 QPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVL 629
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 117/273 (42%), Gaps = 9/273 (3%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ + N +L +++ + Y EM+ P++VTYN +D + K+G +A
Sbjct: 199 APDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASM 258
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIH--QARQLFDEMPKRNLKPDIGAYNAMISS 326
L +EME SL +T + + L R H A +L D M + + K YN +I++
Sbjct: 259 LLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSM-RLSKKASSFTYNPLITA 317
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L+ + A L EME + I VTY+ + GL+K E + M +P
Sbjct: 318 LLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPD 377
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ +C + L L G L G P + L+ G C G EA +
Sbjct: 378 VITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKE 437
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+M V + + + Y + N + K+ +L
Sbjct: 438 EM------VEQGCFPDVCTYTILMNGSRKVRNL 464
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 84/196 (42%)
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V +L P+ T N+++ G ++G++ + +MV G +P +TY I +C++G
Sbjct: 508 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERG 567
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A +L M PS+ T T L+H N++ A F +M ++P+ YN
Sbjct: 568 LLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYN 627
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I +L A EM E+ + + TY + G + +LY M +
Sbjct: 628 VLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQN 687
Query: 382 KFVPKTRTVVMLMKFF 397
P T L K F
Sbjct: 688 GIPPDYCTHNALFKGF 703
>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
Length = 543
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/315 (27%), Positives = 146/315 (46%), Gaps = 9/315 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + D M+ + G + ++ A+C ++ A
Sbjct: 201 TVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYL----YTAVINAYCRAGNVRRA 256
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN +T +L+ GF + G + A EM +M RG + + +N IDG
Sbjct: 257 SEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDG 316
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC++G +A+++ ME++ + T TL G V + +A+ L M ++ + P+
Sbjct: 317 YCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPN 376
Query: 317 IGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
Y +IS I C+ D+ A L EM K VTY+ M G +K + +
Sbjct: 377 YVTYTTLIS--IHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERF 434
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
M + VP T L+ CVN +VD+ L L+ + RG P+ A L++GL
Sbjct: 435 RKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAK 494
Query: 435 RGRWEEAFECSKQML 449
GR EEAF+ ML
Sbjct: 495 EGRSEEAFQLYDDML 509
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 93/183 (50%), Gaps = 1/183 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK-ESGDVTAMEMFYHEMV 239
+N L C M EA+++ ++ + P N L+ + GD+ + EM
Sbjct: 345 YNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMA 404
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSVVTYN+ +DGY KKG +A R +EME+ +P + T +L+HG + +
Sbjct: 405 GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVD 464
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF+EM R +P++ AY A+IS L + A +L D+M + + D+ Y +
Sbjct: 465 VALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALV 524
Query: 360 FGL 362
L
Sbjct: 525 GSL 527
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/226 (25%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ +C Q + A V + + T N L G + + H M+
Sbjct: 310 FNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMI 369
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ VTY I +CK+G +A RLF EM +PS+ T ++ G +I
Sbjct: 370 EKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIR 429
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM K+ L PD+ Y +++ ++ A++L +EM+ + + V Y +
Sbjct: 430 EAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALI 489
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
GL K E +LYD M++ P L+ + R D+
Sbjct: 490 SGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRKDI 535
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 136/334 (40%), Gaps = 15/334 (4%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
A +++ + P ++ + S+++ K ++ D M R G+R +
Sbjct: 114 DAAAILTRALGSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRH---GVR-LNALC 169
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK------TMNILLLGFKESGDVTAMEMF 234
+N LL + +K+ +AR V+ L N T IL+ +GD++ +E
Sbjct: 170 YNSLLDCYVRRKD--DAR---VQELLEIMENGGIEATVGTYTILVDSLSTAGDISKVEAV 224
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
EM + V Y I+ YC+ G A +F+E P+ +T LI+G
Sbjct: 225 VDEMKAKNVAGDVYLYTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCK 284
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + A L +M R + + +N MI R ++ A+++ ME+ I D T
Sbjct: 285 IGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYT 344
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ GL + + + L MIE P T L+ C + L+ +
Sbjct: 345 YNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMA 404
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+G P ++++ G +G EA K+M
Sbjct: 405 GKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEM 438
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/226 (19%), Positives = 96/226 (42%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
S + ++ +DG+CK G DA L +EM R + +L+ ++ + ++L
Sbjct: 131 SPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDDARVQELL 190
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+ M ++ +G Y ++ SL D++ ++DEM+ K + D Y + ++
Sbjct: 191 EIMENGGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRA 250
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ +++D + P RT +L+ FC +++ L + RG +
Sbjct: 251 GNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIF 310
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ ++ G C +G + A + M ++ +Y L L + N
Sbjct: 311 NTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVN 356
>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 754
Score = 125 bits (314), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/327 (26%), Positives = 159/327 (48%), Gaps = 8/327 (2%)
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
FD M++ G+ G + L+ C E+KEA V ++ + + T +L+
Sbjct: 378 FDEMQKR---GLAADGVT-YTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLID 433
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G +T + +++MV + P+VVTY DG CK+G A L EM
Sbjct: 434 GYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLEL 493
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T +LI+G N+ QA + +M + LKPD+ Y +I +L + ++L+ A L+
Sbjct: 494 NIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLL 553
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM +K I VTY+ + G S +EG +L + M+E P T T LMK +C+
Sbjct: 554 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIE 613
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ ++ + P+ + ++L+ G C +EA +M+ + +++ +SY
Sbjct: 614 KNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSY 673
Query: 461 RMLQRYLVQANANEKLEDLDRMIKNLQ 487
L R L N +K + R+ + ++
Sbjct: 674 NALIRLL---NKKKKFTEARRLFEKMR 697
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 125/275 (45%), Gaps = 2/275 (0%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
++F + + + +N+LL+A CT +K+A +F ++ S P+ T I++ G+ +
Sbjct: 243 QLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMAS--PPDVVTYGIMVHGYCTLSE 300
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ EM RG + V Y I C +G DA+R+ E+M + TT
Sbjct: 301 LETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTT 360
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G ++ AR FDEM KR L D Y A+I+ L R +L A ++ EME+K
Sbjct: 361 VMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKG 420
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D VTY + G K + ++++M++ + P T L C V
Sbjct: 421 LDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAAN 480
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L + +G + + L+ GLC G E+A
Sbjct: 481 ELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAM 515
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 142/313 (45%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ +A R V ++ + ++ GF GD+ A ++ EM
Sbjct: 323 YTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQ 382
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VTY I+G C+ G +A R+ +EME T T LI G V +
Sbjct: 383 KRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMT 442
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + ++M ++ + P++ Y A+ L + D+ AA EL+ EM K + + TY+++
Sbjct: 443 EAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLI 502
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE + M E P T ++ C + +D +L ++D+G
Sbjct: 503 NGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIK 562
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P ++L+ G C GR E + ML + + +Y ++++Y ++ N E
Sbjct: 563 PTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEI 622
Query: 479 LDRMIKNLQAVLP 491
M+ Q V+P
Sbjct: 623 YKGMLS--QEVVP 633
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ A C KE+ A S+ ++L + P T N+L+ GF SG V + M+
Sbjct: 533 YTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWML 592
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ TYN + YC + +++ M +P+ T LI G RN+
Sbjct: 593 EKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMK 652
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A EM ++ + +YNA+I L + + A L ++M ++R+ + Y+
Sbjct: 653 EALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPDVYNFYI 712
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
LE L D ++E V
Sbjct: 713 DLSFNEDNLESTLALCDELVEVTLV 737
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/194 (20%), Positives = 71/194 (36%), Gaps = 28/194 (14%)
Query: 298 IHQARQLFDEMPKRNL----------------------------KPDIGAYNAMISSLIR 329
+ +A QLF E+P++N PD+ Y M+
Sbjct: 238 LDEAVQLFQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMASPPDVVTYGIMVHGYCT 297
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+L A++L+ EM + + + V Y ++ L + ++ + M+ V
Sbjct: 298 LSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAV 357
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+M FC + N + + RG G L+ GLC G +EA ++M
Sbjct: 358 FTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEME 417
Query: 450 VRRRQVSEASYRML 463
+ V +Y +L
Sbjct: 418 DKGLDVDAVTYTVL 431
>gi|357500143|ref|XP_003620360.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495375|gb|AES76578.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 426
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 144/284 (50%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++++ C K + +A ++ +++ R P+ T N L+ GF G + ++EM
Sbjct: 104 YSMIINRLCKDKLVVDAYDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMR 163
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P+V ++NI IDG CK+G + M + + P + T ++LI G LV+ +
Sbjct: 164 LKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDGYFLVKKAN 223
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR +F+ M + + D+ +YN MI+ L + + ++ A+ L EM+ K + D +TY T+
Sbjct: 224 KARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLI 283
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + V L D M T L+ C + D + ++ + D+GF
Sbjct: 284 DGLGKLGRISYVWDLIDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFE 343
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ ++LV GLC GR ++A E +L++ ++ Y ++
Sbjct: 344 PNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYRLDVRLYTVM 387
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 138/295 (46%), Gaps = 10/295 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC ++++A +F ++ L PN + NIL+ G + GDV + M+
Sbjct: 139 YNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDGLCKEGDVKGGKSVLAVMI 198
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ +P VVT + IDGY A +F M + L++ +I+G + +
Sbjct: 199 KQSVKPDVVTCSSLIDGYFLVKKANKARYIFNAMAQNGVTIDLRSYNIMINGLSKAKMVD 258
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM +++ PD Y+ +I L + ++ +L+DEM + +TY ++
Sbjct: 259 EAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDLIDEMRATGRSANVITYSSLL 318
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L KS + +++ ++ + F P T +L+ C N R+ ++ L+ +G+
Sbjct: 319 NVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCKNGRLKDAQEIFHDLLIKGYR 378
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+++ GLC ++EA+ C+ + +Y ++ R L + + N+
Sbjct: 379 LDVRLYTVMINGLCREALFDEAYGCTP---------NAVTYEIIIRALFKNDKNK 424
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 21/215 (9%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M LRG + ++ +I I+ + A + ++ ++ P T+TTL+ G +
Sbjct: 1 MELRGIQRDIINLSILINSFYHLCQLNYAFSVLAKILKIGYQPDTVTLTTLLKGLCINNE 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIR-------------------CRD--LNAA 336
+ +A D++ + + D +Y +I+ L + C+D + A
Sbjct: 61 VKKALHFHDDVIAKGFRLDNVSYGTLINGLCKSGETKAPDQFMYSMIINRLCKDKLVVDA 120
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L EM KRI D VTY+T+ +G LE +L++ M VP + +L+
Sbjct: 121 YDLYCEMVVKRIFPDVVTYNTLIYGFCIVGQLEDAIRLFNEMRLKNIVPNVCSFNILIDG 180
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
C V G ++ +I + P L+ G
Sbjct: 181 LCKEGDVKGGKSVLAVMIKQSVKPDVVTCSSLIDG 215
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 78/187 (41%), Gaps = 41/187 (21%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRME-----------REIFVGIRKFGSEEF---- 181
+ L+S +IM++ +SK + +E + F M+ + G+ K G +
Sbjct: 239 IDLRSYNIMINGLSKAKMVDEAVILFKEMQFKSMTPDTITYSTLIDGLGKLGRISYVWDL 298
Query: 182 -----------NV-----LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKE 224
NV LL C A +F K+ + F PN T NIL+ G +
Sbjct: 299 IDEMRATGRSANVITYSSLLNVLCKSGHFDTAIRIFTKIKDKGFEPNMVTYNILVDGLCK 358
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
+G + + +H+++++G+R V Y + I+G C++ F +A C P+ T
Sbjct: 359 NGRLKDAQEIFHDLLIKGYRLDVRLYTVMINGLCREALFDEAY---------GCTPNAVT 409
Query: 285 ITTLIHG 291
+I
Sbjct: 410 YEIIIRA 416
>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
Length = 1099
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 183/424 (43%), Gaps = 35/424 (8%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P+ HP+L + LP TP + + LFA + + AL FF + P F +
Sbjct: 51 PNWQKHPSLRKLLPSLTP-------SHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHS 103
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE---TLEAF 162
+ L+IL R R A + I +S I S E+ LE F
Sbjct: 104 YSSMLNILIRARLLGVAEK-------------------IRISMIKSCCSIEDVLFVLEVF 144
Query: 163 DRMEREIFVGIRKFGS--EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
+M + G KF +N +L + + E ++V+++LL ++ +PN T N ++
Sbjct: 145 RKMNAD---GEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ + G+V E++ ++V G P TY I G+C+ +A +F M + C
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+ + T LIHG I++A +LF +M + N P + Y +I +L A+ L
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+EM+EK + TY + GL K + ++ K+ M E +P T L+ +C
Sbjct: 322 FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+D + + P+ + L+ GLC + + +A +ML R+ S +
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 460 YRML 463
Y L
Sbjct: 442 YNSL 445
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 134/288 (46%), Gaps = 7/288 (2%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
E+F+ + + G + + L+ C + EA +F + P +T +L+
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 223 KESG-DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
SG V A+ +F +EM +G P+V TY + IDG CK+ +A ++ EM +PS
Sbjct: 310 SGSGRKVEALNLF-NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T LI G I A ++ D M + P+ YN +I L + R ++ AM L++
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M E+++ +TY+++ G K + LE +L M E VP T + + C
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
RV+ L+ + +G + L+ G C G+ + A+ ++ML
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 21/395 (5%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
++ +H L ++A +L + + + T+++ ++++ +S E L F+
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDN-CCPTVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 165 MEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
M+ + G E + VL+ C + +M EAR + ++ + P+ T N L+
Sbjct: 325 MKEK--------GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ + G + M P+ TYN I G CKK AM L +M
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PSL T +LIHG V ++ A +L M + L PD Y+ I +L + + A L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
D ++ K + + V Y + G K ++ L +RM+ +P + T +L++ C
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
++ +L ++ G P +L+ + G ++ A + M+ Q +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIK--NLQAVLP 491
Y L Y Q LE++D +I N + +LP
Sbjct: 617 YTAFLHAYFSQG----MLEEVDDVIAKMNEEGILP 647
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 106/261 (40%), Gaps = 1/261 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C +++ A R + + + P+ T ++ + + G V + +
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + + V Y IDGYCK G A L E M ACLP+ T LI G + +
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M +KP + Y +I +++ + A+++ + M D TY
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
LE V + +M E +P T +L+ + + ++D G
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681
Query: 420 PHGHALDLLVTGLCSRGRWEE 440
P + + +L+ L R +E
Sbjct: 682 PSLYIVSILIKNLSHENRMKE 702
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/333 (22%), Positives = 125/333 (37%), Gaps = 69/333 (20%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL----------------- 219
S +NVL++ C +K+MKEA S+ K+L+ P T IL+
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 220 ----LGFKESGDVTAMEMFYH----------------EMVLRGFRPSVVTYNIRIDGYCK 259
LG++ DV F H +M G P +VTY + IDGY +
Sbjct: 604 HMVSLGYQP--DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIH---------------GAGLVRNIHQ---- 300
G A + M C PSL ++ LI G V N++
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNVNSVDIA 721
Query: 301 ----------ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
A +LF++M + D+ Y A+I+ + L A L+ M+E+ +
Sbjct: 722 DVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 781
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
Y+++ K +L D M+E +P + +L+ + + ++
Sbjct: 782 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
L+ G+ A +L+ GL R +E E
Sbjct: 842 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSE 874
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 89/206 (43%), Gaps = 42/206 (20%)
Query: 143 SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
S+ ++ + K YE L+ F++M E + + +G+ L+ FC Q+ ++EA+ +
Sbjct: 717 SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGA-----LIAGFCQQERLEEAQGLV 771
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
H M RG PS YN +D CK G
Sbjct: 772 ----------------------------------HHMKERGMSPSEDIYNSLLDCCCKLG 797
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+ +A+RL + M LP L++ L+ G + + +A+ +F + D A+
Sbjct: 798 VYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWK 857
Query: 322 AMISSLIRCRDL-NAAMELMDEMEEK 346
+I L++ RDL + EL+D MEEK
Sbjct: 858 VLIDGLLK-RDLVDECSELIDIMEEK 882
>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 147/307 (47%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ A C + + EA +F ++ + + + T N L+ GF G + +EMV
Sbjct: 202 YNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMV 261
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P+V TYNI +D CK+G +A + M + P + T +TL+ G LV +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M + PD+ Y +I+ + + ++ A+ L EM +K + VTY ++
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + V L D M + T L+ C N +D + L+ + D+
Sbjct: 382 DGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIR 441
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ +L+ GLC GR ++A E + +L + ++ +Y M+ + Q E L
Sbjct: 442 PNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTM 501
Query: 479 LDRMIKN 485
L +M N
Sbjct: 502 LSKMEDN 508
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 134/272 (49%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A C + ++KEA+SV V L + P+ T + L+ G+ +V + ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P V TY I I+G+CK +A+ LF+EM + +P + T ++LI G I
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIS 391
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
L DEM R D+ Y+++I L + L+ A+ L ++M+++ I + T+ +
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +++ ++ + T +++ C ++ L + + D G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 511
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ + ++ L + ++A + +QM+ R
Sbjct: 512 PNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L +K + Y + R+E + GI+ N+L+ FC ++ SV K+
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELK---GIQP-DLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L R + P+ T+N L+ G G V F+ +++ +GF+ + V+Y I+G CK G
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A++ +++ P + T+I + + +A LF EM + + D+ YN +
Sbjct: 181 RAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTL 240
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L A+ L++EM K I + TY+ + L K ++ + M++
Sbjct: 241 IYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM + + + V +++ + G P H +L+ G C +EA
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360
Query: 444 CSKQM 448
K+M
Sbjct: 361 LFKEM 365
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ + +A S F ++L R P N +L F + + H + L+G +P ++T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI I+ +C G + ++ + P T+ TLI G L + +A D++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ + + +Y +I+ + + D AA++ + +++ + D V Y+T+ + K +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L+ M T L+ FC+ ++ + L ++ + P+ + ++LV
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 431 GLCSRGRWEEA 441
LC G+ +EA
Sbjct: 278 ALCKEGKVKEA 288
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/169 (20%), Positives = 69/169 (40%), Gaps = 35/169 (20%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
++N+ A F+ M P I +N ++ S + + + A+ L +E K I D +T
Sbjct: 37 IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ +L+ FC ++ G ++ ++
Sbjct: 97 LN-----------------------------------ILINCFCHMGQITFGFSVLAKIL 121
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
RG+ P L+ L+ GLC +G+ ++A ++L + Q+++ SY L
Sbjct: 122 KRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 170
>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
sativus]
Length = 681
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 168/380 (44%), Gaps = 12/380 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L + F + S AL F + F P F LH L +A +L +
Sbjct: 116 NILIKCFCSCSKLPFALSTFG-KITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC 174
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R P+++T ++ L R + +EA ++R + G++ + ++ C
Sbjct: 175 R--PNVVTFTTLMNGLCREGR------VVEAVALLDRMVEDGLQP-NQITYGTIVDGMCK 225
Query: 191 QKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ A ++ K+ +S PN + ++ G + G + Y EM +G P +
Sbjct: 226 IGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLF 285
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYN IDG+C G + +A RL +EM P++ T + LI+ R +A +L+DEM
Sbjct: 286 TYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEM 345
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
R + P+ YN+MI + L+AA + M K D T++T+ G + +
Sbjct: 346 LPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRI 405
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ +L M E V T T L+ FC+ ++ L+L +I G CP + L
Sbjct: 406 DDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 465
Query: 429 VTGLCSRGRWEEAFECSKQM 448
+ GLC G+ ++A E K M
Sbjct: 466 LDGLCDNGKLKDALEMFKAM 485
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 148/354 (41%), Gaps = 50/354 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC+ EA+ + ++L R PN T + L+ + + E Y EM+
Sbjct: 287 YNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEML 346
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TYN IDG+CK+ A +F M C P + T TLI G + I
Sbjct: 347 PRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRID 406
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EM + L D YN +I DLNAA++L +M + D VT +T+
Sbjct: 407 DGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 466
Query: 360 FGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF----- 383
GL + +G+E + Y+ +I EGKF
Sbjct: 467 DGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEE 526
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P + LV+G C
Sbjct: 527 LYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYC 586
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEA-SY-RMLQRYLVQANANEKLEDLDRMIKN 485
GR ++ E +M RR V++A +Y ++ + N N L+ MI +
Sbjct: 587 KAGRVDDGLELFCEM-GRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISS 639
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/415 (23%), Positives = 160/415 (38%), Gaps = 56/415 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+ AL + + H P + + L + A L + +Q P L T
Sbjct: 230 VSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNC 289
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M ++ + L+ + +ER+I + + + L+ A+ +++ EA ++
Sbjct: 290 MIDGFCSSGRWSEAQRLLQ--EMLERKINPNVVTYSA-----LINAYVKERKFFEAEELY 342
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R PN T N ++ GF + + A E ++ M +G P V T+N IDGYC
Sbjct: 343 DEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGA 402
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM------------ 308
D L EM + T TLIHG LV +++ A L +M
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462
Query: 309 ----------------------------------PKRNLKPDIGAYNAMISSLIRCRDLN 334
P ++PD+ YN +IS LI
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL EM + I + +TY +M GL K S L+ +++D M F P T L+
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+C RVD GL L+ + RG L+ G G A + ++M+
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMI 637
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 154/357 (43%), Gaps = 16/357 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
P ++T S +L + E L+ F +M R V F L+ C +
Sbjct: 144 QPDVVTF---STLLHGLCVEDRVSEALDLFHQMCRPNVV--------TFTTLMNGLCREG 192
Query: 193 EMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGD-VTAMEMFYHEMVLRGFRPSVVTY 250
+ EA ++ +++ PN T ++ G + GD V+A+ + + +P+VV Y
Sbjct: 193 RVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIY 252
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
+ IDG K G DA L+ EM+ P L T +I G +A++L EM +
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R + P++ Y+A+I++ ++ R A EL DEM + I + +TY++M G K + L+
Sbjct: 313 RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDA 372
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
++ M P T L+ +C R+D G L + + G + L+
Sbjct: 373 AEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIH 432
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
G C G A + S+QM+ + L L N KL+D M K +Q
Sbjct: 433 GFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD---NGKLKDALEMFKAMQ 486
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 108/222 (48%), Gaps = 12/222 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFY--- 235
+N L+ FC ++ A + +++S P+ T N LL G ++G + A+EMF
Sbjct: 427 YNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 486
Query: 236 -HEMVL------RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+M L G P V TYNI I G +G F +A L++EM +P+ T +++
Sbjct: 487 KSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSM 546
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G + +A Q+FD M ++ PD+ +N ++S + ++ +EL EM + I
Sbjct: 547 INGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGI 606
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
D +TY T+ G K + G ++ MI P T T+
Sbjct: 607 VADAITYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITI 648
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 123/273 (45%), Gaps = 12/273 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C K + + + ++ + + T N L+ GF GD+ A +M+
Sbjct: 392 FNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMI 451
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P +VT N +DG C G DA+ +F+ M++ P +QT L
Sbjct: 452 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNIL 511
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L+ EMP R + P+ Y++MI+ L + L+ A ++ D M K
Sbjct: 512 ISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSF 571
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D VT++T+ G K+ ++ +L+ M V T + L+ F ++ L+
Sbjct: 572 SPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALD 631
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ +I G P + ++T L S+ + A
Sbjct: 632 IFQEMISSGVYPDTITIRSMLTVLWSKEELKRA 664
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 7/217 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE-----FNVLLQAF 188
P ++T ++ L K + E +A + + ++ R F E +N+L+
Sbjct: 457 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDAS-RPFNGVEPDVQTYNILISGL 515
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + EA ++ ++ R PN T + ++ G + + + M + F P V
Sbjct: 516 INEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDV 575
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VT+N + GYCK G D + LF EM R + T TLIHG V NI+ A +F E
Sbjct: 576 VTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQE 635
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
M + PD +M++ L +L A+ ++++++
Sbjct: 636 MISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQ 672
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 141/337 (41%), Gaps = 44/337 (13%)
Query: 116 MRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
++ + A +L S + R+ P L ++ + ++ + + + + + + +MER+
Sbjct: 55 IKGLEDAIDLFSDMVRSRP-LPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQI----P 109
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN+L++ FC+ ++ A S F G +T +
Sbjct: 110 CDVYSFNILIKCFCSCSKLPFALSTF------------------------GKITKL---- 141
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
GF+P VVT++ + G C + +A+ LF +M C P++ T TTL++G
Sbjct: 142 ------GFQPDVVTFSTLLHGLCVEDRVSEALDLFHQM----CRPNVVTFTTLMNGLCRE 191
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE-KRIGHDNVT 354
+ +A L D M + L+P+ Y ++ + + D +A+ L+ +MEE I + V
Sbjct: 192 GRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVI 251
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + GL K LY M E P T ++ FC + R L ++
Sbjct: 252 YSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEML 311
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+R P+ L+ ++ EA E +ML R
Sbjct: 312 ERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPR 348
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/197 (20%), Positives = 82/197 (41%), Gaps = 4/197 (2%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
++ + A LF +M + P + +N ++ ++R + + L +ME K+I D +
Sbjct: 55 IKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYS 114
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ + S L + ++ + F P T L+ CV RV L+L+ +
Sbjct: 115 FNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFHQMC 174
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
P+ L+ GLC GR EA +M+ Q ++ +Y + + +
Sbjct: 175 R----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTV 230
Query: 475 KLEDLDRMIKNLQAVLP 491
+L R ++ + + P
Sbjct: 231 SALNLLRKMEEMSHIKP 247
>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 840
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 161/330 (48%), Gaps = 5/330 (1%)
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
+H L++ S +++L + K + + + F ME G+R ++ L+ C Q
Sbjct: 414 SHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEAN---GLRP-DLITYSTLIHGLCKQ 469
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
E+++A ++ K+ S R PN+ +L+G E G ++ M++ ++ ++ Y
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI IDGY K+G +A++L++++ P++ T +L++G + R + QAR+L D +
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKL 589
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
L+P+ Y +++ ++ + +EL+ EM+ K IG ++TY + GL K L+
Sbjct: 590 HGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQE 649
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
C+L + M P + +++ FC + L+ ++ P ++L+
Sbjct: 650 SCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILIN 709
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
G C G ++A + R+ +++ +Y
Sbjct: 710 GFCVYGDLKDADNLLVSLQNRKVNLNKYAY 739
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 100/438 (22%), Positives = 185/438 (42%), Gaps = 15/438 (3%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
PQ+ SS +V+ + S A+ FF+ T + F P+ +F + ++ +
Sbjct: 243 PQSEYTSSIVVDGL-----CRQSRFQDAVLFFQDT-EGKEFQPSVVSFNTIMSRYCKLGF 296
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A + + H L S +I++ + S E L+ + ME G+
Sbjct: 297 VDVAKSFFCMMLK-HGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENH---GLEP-DM 351
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N+L + F + A ++ K+L + PN T +L+ G + G+V Y E
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ GF+ S+++ + + CK A +LF EME P L T +TLIHG
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGE 471
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ QA L+++M + P+ + A++ L ++ A D + + D + Y+
Sbjct: 472 VQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNI 531
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M G +K KLY ++ E P T LM FC+N ++ L + G
Sbjct: 532 MIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHG 591
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P+ L+ C G + E +M + + +Y ++ + L + KL+
Sbjct: 592 LEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCK---QWKLQ 648
Query: 478 DLDRMIKNLQAVLPPPTR 495
+ ++++++ AV P +
Sbjct: 649 ESCQLLEDMDAVGLTPDQ 666
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC +++ +AR + + L PN T L+ + E G++ ++ EM
Sbjct: 564 FNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMK 623
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ +TY + I G CK+ ++ +L E+M+ V P + T+I R++
Sbjct: 624 AKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMR 683
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QL+D+M NL+P YN +I+ DL A L+ ++ +++ + Y T+
Sbjct: 684 KAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTII 743
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
++ + +M+E F R ++ C V + ++ G C
Sbjct: 744 KAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVC 803
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P ++L+ G FE +M+
Sbjct: 804 PDQDLFEVLLNAFHQCGHLNSEFELLAEMI 833
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/310 (25%), Positives = 140/310 (45%), Gaps = 12/310 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ VL+ C ++EA ++ +++S F + + +LL +S V + EM
Sbjct: 389 YTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEME 448
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA---GLVR 296
G RP ++TY+ I G CK+G A+ L+E+M +P+ +LIHGA GL
Sbjct: 449 ANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPN-----SLIHGAILMGLCE 503
Query: 297 --NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
I QAR FD + NL DI YN MI I+ + A++L ++ EK I VT
Sbjct: 504 KGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVT 563
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++++ +G + L +L D + P T LM +C + L L +
Sbjct: 564 FNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMK 623
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANAN 473
+ P +++ GLC + + +E+ + + M + SY ++Q + +
Sbjct: 624 AKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMR 683
Query: 474 EKLEDLDRMI 483
+ + D+M+
Sbjct: 684 KAFQLYDKML 693
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/345 (23%), Positives = 141/345 (40%), Gaps = 59/345 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L A+ + +A V VK+ F + +T N LL + S M Y+E+
Sbjct: 182 WDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNLRHS---NIMWDVYNEIK 238
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G S T +I +DG C++ F DA+ F++ E PS+ + T++ + +
Sbjct: 239 VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVD 298
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM- 358
A+ F M K L PD +YN +I L + A++L ++ME + D VTY+ +
Sbjct: 299 VAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA 358
Query: 359 ----FFGLMKSS------------------------------GLEGVCKLYDRMIEGKFV 384
GL+ + +E KLY MI F
Sbjct: 359 KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQ 418
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF-- 442
+ +L+ C + +VD+ L+ + G P L+ GLC +G ++A
Sbjct: 419 LSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILL 478
Query: 443 ---ECSKQM-------------LVRRRQVSEASYRMLQRYLVQAN 471
CS ++ L + ++S+A RM YL+ +N
Sbjct: 479 YEKMCSNRIIPNSLIHGAILMGLCEKGKISQA--RMYFDYLITSN 521
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 69/167 (41%), Gaps = 36/167 (21%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYH 236
S +N+L+ FC ++K+A ++ V L +R NK ++ GDV +++
Sbjct: 701 SVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFR 760
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+MV +GF S+ Y+ I CK+ CL
Sbjct: 761 QMVEKGFEVSIRDYSAVIGRLCKR-----------------CL----------------- 786
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+ +A+ F M + PD + ++++ +C LN+ EL+ EM
Sbjct: 787 -VTEAKYFFCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEM 832
>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
Length = 735
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 118/474 (24%), Positives = 196/474 (41%), Gaps = 63/474 (13%)
Query: 58 LPQTTPLSSTLVENVLGRLFAAHSNGL-------------------KALEFFK-FTLQHP 97
L +T L + L + GR+F++ S+G A++ F+ T P
Sbjct: 9 LLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSRP 68
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P F + ++AR + +D +L ++ + L ++SIM++ + +
Sbjct: 69 R--PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLSL 125
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMN 216
AF M + I +G + F+ L+ C + + EA + +++ P T+N
Sbjct: 126 ---AFSAMGKIIKLGYEP-DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLN 181
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY-------------------------- 250
L+ G +G V+ + MV GF+P+ VTY
Sbjct: 182 ALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEER 241
Query: 251 ---------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
+I IDG CK G +A LF EME + TTLI G
Sbjct: 242 KIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDG 301
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+L +M KR + PD+ A++A+I ++ L A EL EM ++ I D VTY ++ G
Sbjct: 302 AKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDG 361
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K + L+ + D M+ P RT +L+ +C +D GL L+ + RG
Sbjct: 362 FCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVAD 421
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ L+ G C G+ E A E ++M+ RR + SY++L L EK
Sbjct: 422 TVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 164/380 (43%), Gaps = 11/380 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + L ++ + A EL+ ++ L +K SI++ + K S +
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNA 266
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
F+ ME I+ F ++ + L++ FC + + ++ R P+
Sbjct: 267 FNLFNEME------IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ F + G + E + EM+ RG P VTY IDG+CK+ A + + M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+++T LI+G I +LF +M R + D YN +I L
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A EL EM +R+ D V+Y + GL + E ++++++ + K +++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C +VD +L+ L +G P ++++ GLC +G EA ++M
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 456 SEASYRMLQR-YLVQANANE 474
+ +Y +L R +L + +A +
Sbjct: 561 NGCTYNILIRAHLGEGDATK 580
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 118/263 (44%), Gaps = 38/263 (14%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER---EIFVGIRKFGSEEFNVLLQ 186
+R P +++ K I+L + E+ LE F+++E+ E+ +GI +N+++
Sbjct: 451 RRVRPDIVSYK---ILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI-------YNIIIH 500
Query: 187 AFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C ++ +A +F L L P+ KT NI++ G + G ++ ++ + +M G P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL----------------------PSLQ 283
+ TYNI I + +G + +L EE++R P +
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVF 620
Query: 284 TITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
T TTL+ L N ++ A LF M KP++ YN +I L+ ++ ++D
Sbjct: 621 TFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLD 680
Query: 342 EMEEKRIGHDNVTYHTMFFGLMK 364
+M E+ + VT T GL K
Sbjct: 681 QMFERGCQPNAVTKSTFISGLCK 703
>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 529
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC ++ A S+ + +L P NIL+ + G+V + M
Sbjct: 188 YTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMT 247
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P VVTY+ +DGYC G +A ++F M ++ P++ + +I+G + +
Sbjct: 248 KEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVD 307
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM +N+ PD YN++I L + + +A+ LM+EM + D VTY ++
Sbjct: 308 EAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLL 367
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K+ L+ L+ +M E P T L+ C R+ L+ +L+ +G C
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCC 427
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++++GLC G ++EA +M + ++ ++ R L + + N+K E L
Sbjct: 428 IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKL 487
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 91/355 (25%), Positives = 152/355 (42%), Gaps = 40/355 (11%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L ++K + Y + +ME + GIR N+L+ FC +M + SV K+
Sbjct: 16 ILGSLAKMKQYLTAISLSKQMEVK---GIRA-NFVTLNILINCFCHLGQMAFSFSVLGKI 71
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF-------------------- 243
L + P+ T+N L+ G G+V F+ ++V +GF
Sbjct: 72 LKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGET 131
Query: 244 ---------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
RP+VV YN IDG CK +A L+ EM+ P T TTL
Sbjct: 132 RCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTL 191
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G L+ + A L DEM +N+ P + YN +I++L + ++ A L+ M ++ I
Sbjct: 192 IYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGI 251
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
VTY T+ G ++ +++ M++ P + +++ C RVD +N
Sbjct: 252 KPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMN 311
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L ++ + P + L+ GLC GR A +M R + +Y L
Sbjct: 312 LLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSL 366
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 99/218 (45%), Gaps = 5/218 (2%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG 221
++IF + + G +N+++ C K + EA ++ ++L + P+ T N L+ G
Sbjct: 275 KQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDG 334
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+SG +T+ +EM RG VVTY +D CK A LF +M+ P+
Sbjct: 335 LCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPT 394
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T T LI G + A++LF + + D+ Y MIS L + + A+ +
Sbjct: 395 MYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKS 454
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ME+ + VT+ + L + + KL MI
Sbjct: 455 KMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 492
>gi|15236834|ref|NP_194398.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|334186944|ref|NP_001190849.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213515|sp|Q9SZ10.1|PP338_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g26680, mitochondrial; Flags: Precursor
gi|4455191|emb|CAB36514.1| putative protein [Arabidopsis thaliana]
gi|7269520|emb|CAB79523.1| putative protein [Arabidopsis thaliana]
gi|332659836|gb|AEE85236.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332659837|gb|AEE85237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 521
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/440 (24%), Positives = 189/440 (42%), Gaps = 30/440 (6%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
L S V+NVL ++ + L +LEFF + + + + LH L + R F A
Sbjct: 79 LDSFRVKNVLLKI---QKDYLLSLEFFNWAKTRNPGSHSLETHAIVLHTLTKNRKFKSAE 135
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD------------RMEREIFV 171
++ V L K +L ++ + T FD R + F+
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLY---SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 172 GIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESG 226
++ +G E N + + Q + A + ++ + +PN T+N+++ G+ SG
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNPYTLNMVMSGYCRSG 252
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
+ +M GFR + V+YN I G+C+KG A++L M + P++ T
Sbjct: 253 KLDKGIELLQDMERLGFRATDVSYNTLIAGHCEKGLLSSALKLKNMMGKSGLQPNVVTFN 312
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
TLIHG + +A ++F EM N+ P+ YN +I+ + D A ++M
Sbjct: 313 TLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
I D +TY+ + FGL K + + + + VP + T L+ CV D G
Sbjct: 373 GIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNADRG 432
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L+ +I G P+ ++LV+ C E F+ + Q+L R++ S + R
Sbjct: 433 FELYKSMIRSGCHPNEQTFNMLVSAFCR----NEDFDGASQVL---REMVRRSIPLDSRT 485
Query: 467 LVQANANEKLEDLDRMIKNL 486
+ Q K + D+++K L
Sbjct: 486 VHQVCNGLKHQGKDQLVKKL 505
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 105/208 (50%), Gaps = 1/208 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC +++EA VF ++ + APN T N L+ G+ + GD FY +MV
Sbjct: 311 FNTLIHGFCRAMKLQEASKVFGEMKAVNVAPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + ++TYN I G CK+ A + +E+++ +P+ T + LI G + +N
Sbjct: 371 CNGIQRDILTYNALIFGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRKNAD 430
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +L+ M + P+ +N ++S+ R D + A +++ EM + I D+ T H +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNMLVSAFCRNEDFDGASQVLREMVRRSIPLDSRTVHQVC 490
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
GL + V KL M KF+ ++
Sbjct: 491 NGLKHQGKDQLVKKLLQEMEGKKFLQES 518
>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
Length = 1205
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 148/307 (48%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ A C + + EA +F ++ + + + T + L+ GF G + +EMV
Sbjct: 202 YSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMV 261
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P+V TYNI +D CK+G +A + M + P + T +TL+ G LV +
Sbjct: 262 LKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVK 321
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M + PD+ Y +I+ + + ++ A+ L EM +K + VTY ++
Sbjct: 322 KAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + V L D M + T L+ C N +D + L+ + D+G
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ +L+ GLC GR ++A E + +L + ++ +Y M+ + Q E L
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTM 501
Query: 479 LDRMIKN 485
L +M N
Sbjct: 502 LSKMEDN 508
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 123/253 (48%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A C + ++KEA+SV +L P+ T + L+ G+ +V + ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P V TY I I+G+CK +A+ LF+EM + +P + T ++LI G I
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
L DEM R ++ Y+++I L + L+ A+ L ++M+++ I + T+ +
Sbjct: 392 YVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILL 451
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +++ ++ + T +++ C ++ L + + D G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCI 511
Query: 420 PHGHALDLLVTGL 432
P ++++ L
Sbjct: 512 PDAVTFEIIIIAL 524
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+L+ FC ++ SV K+L R + P+ T+N L+ G G V F+ +++
Sbjct: 97 LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF+ + V+Y I+G CK G A++L ++++ P++ +T+I + +
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM + + D+ Y+ +I L A+ L++EM K I + TY+ +
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K ++ + M++ P T LM + + + V +++ + G
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P H +L+ G C +EA K+M
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEM 365
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 116/249 (46%), Gaps = 2/249 (0%)
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
L P+ T+NIL+ F G +T +++ RG+ P +T+ I+G C KG
Sbjct: 954 LKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVN 1013
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+ +++ + + TLI+G + + A +L ++ R KPD+ YN +I
Sbjct: 1014 KALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTII 1073
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+L + + ++ A L EM K I D VTY+T+ +G L+ L ++M+
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN 1133
Query: 385 PKTRTVVMLMKFFCVNFR--VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P RT +L+ C + +D L++ + D G + +++++ L + ++
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193
Query: 443 ECSKQMLVR 451
+ +M+ R
Sbjct: 1194 KLLHEMIAR 1202
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 1/185 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ FC K + EA ++F ++ + P T + L+ G +SG + + EM
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMH 401
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +V+TY+ IDG CK G A+ LF +M+ P+ T T L+ G +
Sbjct: 402 DRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 461
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+++F ++ + ++ YN MI + L A+ ++ +ME+ D VT+ +
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521
Query: 360 FGLMK 364
L K
Sbjct: 522 IALFK 526
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 111/251 (44%), Gaps = 1/251 (0%)
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ + +A S F ++L R P N +L F + + H + L+G +P ++T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI I+ +C G + ++ + P T+ TLI G L + +A D++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ + + +Y +I+ + + D AA++L+ +++ + + V Y T+ L K +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L+ M T L+ FC+ ++ + L ++ + P+ + ++LV
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 431 GLCSRGRWEEA 441
LC G+ +EA
Sbjct: 278 ALCKEGKVKEA 288
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/246 (21%), Positives = 112/246 (45%), Gaps = 2/246 (0%)
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
H + L+G +P + T NI I+ +C G + ++ + P T TTLI+G L
Sbjct: 950 HRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLK 1009
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+++A D++ + + + +Y +I+ + + D AA++L+ +++ + D V Y
Sbjct: 1010 GQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMY 1069
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ L K + L+ M T L+ FC+ ++ + L ++
Sbjct: 1070 NTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVL 1129
Query: 416 RGFCPHGHALDLLVTGLCSRGR--WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ P+ ++LV LC G+ +E+ +M + + ++ ++ L + + N
Sbjct: 1130 KTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDEN 1189
Query: 474 EKLEDL 479
+K+E L
Sbjct: 1190 DKVEKL 1195
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 6/115 (5%)
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T+ +L+ FC ++ G ++ ++ RG+ P L+ L+ GLC +G+ ++A
Sbjct: 92 PDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHF 151
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
++L + Q+++ SY L N K+ D IK LQ + T+ V
Sbjct: 152 HDKLLAQGFQLNQVSYGTL------INGVCKIGDTRAAIKLLQKIDGRLTKPNVV 200
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 85/196 (43%), Gaps = 13/196 (6%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ-RTHPSLLTLKSMS 143
+AL FK + + P + + L + W+L+ + R P+ + + S
Sbjct: 357 EALNLFK-EMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPA--NVITYS 413
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K + + F++M+ + GIR + F +LL C +K+A+ VF
Sbjct: 414 SLIDGLCKNGHLDRAIALFNKMKDQ---GIRP-NTFTFTILLDGLCKGGRLKDAQEVFQD 469
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK-- 260
LL++ + N T N+++ G + G + +M G P VT+ I I KK
Sbjct: 470 LLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529
Query: 261 --GCFGDAMRLFEEME 274
G G +++E +E
Sbjct: 530 NGGNVGFDKKVWEIVE 545
>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 443
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 91/318 (28%), Positives = 154/318 (48%), Gaps = 4/318 (1%)
Query: 184 LLQAFC-TQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ FC K K R + + S P+ T N+L+ G +G E +MV RG
Sbjct: 125 LIRGFCKIGKTRKATRIMEIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRG 184
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
PSVVT+NI I+ C+KG G A+ + E+M + C P+ + L+HG + + +A
Sbjct: 185 CSPSVVTFNILINFLCRKGLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAI 244
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +M R PDI YN ++++L + ++AA+EL++++ K +TY+T+ GL
Sbjct: 245 EYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGL 304
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K + KL D M P T L+ +VD + + L G P+
Sbjct: 305 SKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNA 364
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDR 481
+ ++ GLC + + A + M+ R + +EASY +L L + A E LE L+
Sbjct: 365 ITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNE 424
Query: 482 MIKNLQAVLPPPTRQQVA 499
+ L+ V+ + ++VA
Sbjct: 425 LC--LRGVVKKSSAEKVA 440
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
R+ D L V+R PS++T +I+++ + + ++ ++M +
Sbjct: 169 RWMDAEKLLADMVRRGCSPSVVTF---NILINFLCRKGLLGRAIDVLEKMPKHGCTP--- 222
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMF 234
S +N LL FC +K+M+ A K+ SR P+ T N LL + G V A
Sbjct: 223 -NSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVEL 281
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+++ +G P ++TYN IDG K G A +L +EM P + T ++L+ G
Sbjct: 282 LNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSR 341
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A + F ++ +KP+ YNA++ L + R + A++ + M ++ +
Sbjct: 342 EGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEAS 401
Query: 355 YHTMFFGL 362
Y + GL
Sbjct: 402 YTILIEGL 409
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/190 (21%), Positives = 79/190 (41%)
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G + R E M +P + T+LI G + +A ++ + + PD+
Sbjct: 96 RNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPDVI 155
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +IS + A +L+ +M + VT++ + L + L + ++M
Sbjct: 156 TYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLEKM 215
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ P + + L+ FC +++ + G + RG P + L+T LC G+
Sbjct: 216 PKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKV 275
Query: 439 EEAFECSKQM 448
+ A E Q+
Sbjct: 276 DAAVELLNQL 285
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/160 (21%), Positives = 65/160 (40%), Gaps = 2/160 (1%)
Query: 294 LVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
LVRN + + + + M R PDI ++I + A +M+ +E+ D
Sbjct: 94 LVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDSGAVPD 153
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
+TY+ + G+ + KL M+ P T +L+ F C + +++
Sbjct: 154 VITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRAIDVLE 213
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ G P+ + + L+ G C + E A E +M R
Sbjct: 214 KMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSR 253
>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Cucumis sativus]
Length = 645
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 132/288 (45%), Gaps = 4/288 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E E+ R RE+ V + +N L+ +C K+A ++ +L P+ T
Sbjct: 234 EEAESMHRAMREVGVYPNVY---TYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTF 290
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
IL+ G + G++ A + M+ P++ YN ID YCK G +AM LF E+ER
Sbjct: 291 GILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELER 350
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T + LI G V +A +F++M K + + YN++I + ++
Sbjct: 351 FEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDK 410
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+E+ +M E + + +T+ T+ G K L+ +Y M+ P T ++
Sbjct: 411 ALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMID 470
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C + L L+ ++D G P+ + + L+ GLC G+ +A E
Sbjct: 471 GHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALE 518
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/387 (22%), Positives = 169/387 (43%), Gaps = 12/387 (3%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
TP+ + + + +L +M ++A + V + LT+++ +++L + K +E
Sbjct: 114 TPNVYGELIIVLCKMELVEEALSMYHKVG----AALTIQACNVLLYVLVKTGRFELLWRI 169
Query: 162 FDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILL 219
++ M + + FG+ L+ C Q ++ A+ +F ++ + P IL+
Sbjct: 170 YEEMISNGLSPSVITFGT-----LIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILI 224
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G + E + M G P+V TYN +DGYCK A+RL+++M +
Sbjct: 225 RGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLV 284
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P + T LI G + AR LF M K ++ P+I YN++I + + D++ AM L
Sbjct: 285 PDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMAL 344
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
E+E + D TY + GL S E ++++M + + + T L+ C
Sbjct: 345 FLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCK 404
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
++D L + + + G P+ L+ G C + A +M+++ +
Sbjct: 405 EGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVT 464
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIKN 485
Y M+ + + E L+ M+ N
Sbjct: 465 YTAMIDGHCKYGSMKEALKLYSDMLDN 491
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 136/304 (44%), Gaps = 14/304 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ C EMK AR++FV ++ PN N L+ + + GDV+ + E+
Sbjct: 290 FGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELE 349
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TY+I I G C +A +FE+M + L + T +LI G +
Sbjct: 350 RFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMD 409
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ +M + ++P++ ++ +I + R+L AAM + EM K + D VTY M
Sbjct: 410 KALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMI 469
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID---- 415
G K ++ KLY M++ P T+ L+ C + ++ L L+ I+
Sbjct: 470 DGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTP 529
Query: 416 ------RGFCPH--GH-ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
G P H A L+ GLC G++ +A + M Q E Y ++ R
Sbjct: 530 RCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRG 589
Query: 467 LVQA 470
L Q
Sbjct: 590 LFQV 593
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 85/197 (43%), Gaps = 27/197 (13%)
Query: 120 DQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D+A E+ S + P+++T S ++ K ++ + + + M I+
Sbjct: 409 DKALEICSQMTENGVEPNVITF---STLIDGYCKIRNLQAAMGIYSEMV------IKSLS 459
Query: 178 SE--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEM 233
+ + ++ C MKEA ++ +L PN T++ LL G + G ++ A+E+
Sbjct: 460 PDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALEL 519
Query: 234 FYHEMVLR---------GFRPSV---VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F ++ + G +PS+ V Y I G C+ G F A++LF +M R P
Sbjct: 520 FTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPD 579
Query: 282 LQTITTLIHGAGLVRNI 298
++ G V+ I
Sbjct: 580 EVIYVVMLRGLFQVKYI 596
>gi|449444614|ref|XP_004140069.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
gi|449528063|ref|XP_004171026.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Cucumis sativus]
Length = 536
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 161/352 (45%), Gaps = 6/352 (1%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
+P F+ A ++ F A + + + + L T++S + LS + F + L
Sbjct: 167 SPHVFDLLFKTFAHLKKFRNASDTFCRM-KDYGFLPTVESCNAYLSSLLNFSRGDIALAF 225
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
+ M R S N+++ A C + +A VF ++ + F+PN + N L+
Sbjct: 226 YREMRRSRIYP----NSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIA 281
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ G +++ M G P VVT+N ++G+CK G +A +LF EM+ ++ P
Sbjct: 282 GYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSP 341
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T LI+G N +LF+EM + +K DI YNA+I L + A L+
Sbjct: 342 TTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKKAAYLV 401
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
E++EK + + T+ + +G E ++Y MI+ F P +T ML+ FC N
Sbjct: 402 RELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLSTFCEN 461
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
D + L +++R P + L L GL G+ + A ++ +R
Sbjct: 462 EDYDGAVQLLEEMLNRHKAPDVNNLYELCAGLGQCGKVKTAMMLCSELEAQR 513
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 165/383 (43%), Gaps = 16/383 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT----HPSLL---T 138
+LEFF + + T + LHIL + R F A ++ + + PS L
Sbjct: 98 SLEFFNWVATQNPSSHTLETHCIILHILTKRRKFKSAESILRSIIESCSIDFPSKLFESL 157
Query: 139 LKSMSIMLSRISKFQSYEET---LEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQ 191
L S + S F +T L+ F R + F ++ +G E N L +
Sbjct: 158 LYSYRLCDSSPHVFDLLFKTFAHLKKF-RNASDTFCRMKDYGFLPTVESCNAYLSSLLNF 216
Query: 192 KEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
A + + ++ SR PN+ T+N+++ + G + + + EM GF P+V +Y
Sbjct: 217 SRGDIALAFYREMRRSRIYPNSYTLNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASY 276
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N I GYC KG AM+L ME+ P + T TL++G V + +A +LF EM
Sbjct: 277 NTLIAGYCNKGLLSSAMKLRSVMEKNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKG 336
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+L P YN +I+ + + L +EM ++ D +TY+ + GL K +
Sbjct: 337 MSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMSRFQVKADILTYNALILGLCKEGKTKK 396
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L + E VP T L+ CV + + ++ +I F P +L++
Sbjct: 397 AAYLVRELDEKGLVPNASTFSALIYGQCVQKQSERAFQIYKSMIKSSFTPCDQTFRMLLS 456
Query: 431 GLCSRGRWEEAFECSKQMLVRRR 453
C ++ A + ++ML R +
Sbjct: 457 TFCENEDYDGAVQLLEEMLNRHK 479
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/207 (23%), Positives = 98/207 (47%), Gaps = 1/207 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC +++EA +F ++ +P T NIL+ G+ ++G+ + EM
Sbjct: 311 FNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCEMGNRLFEEMS 370
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ ++TYN I G CK+G A L E++ +P+ T + LI+G + +
Sbjct: 371 RFQVKADILTYNALILGLCKEGKTKKAAYLVRELDEKGLVPNASTFSALIYGQCVQKQSE 430
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A Q++ M K + P + ++S+ D + A++L++EM + D + +
Sbjct: 431 RAFQIYKSMIKSSFTPCDQTFRMLLSTFCENEDYDGAVQLLEEMLNRHKAPDVNNLYELC 490
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPK 386
GL + ++ L + + +P+
Sbjct: 491 AGLGQCGKVKTAMMLCSELEAQRLLPE 517
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 72/191 (37%), Gaps = 4/191 (2%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
++ A F M P + + NA +SSL+ + A+ EM RI ++ T
Sbjct: 181 LKKFRNASDTFCRMKDYGFLPTVESCNAYLSSLLNFSRGDIALAFYREMRRSRIYPNSYT 240
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ + K L+ +++ M F P + L+ +C + + L +
Sbjct: 241 LNLVICACCKLGRLDKANVVFEEMGTMGFSPNVASYNTLIAGYCNKGLLSSAMKLRSVME 300
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--- 471
G P + LV G C G+ +EA + +M + +Y +L +A
Sbjct: 301 KNGVPPDVVTFNTLVNGFCKVGKLQEASKLFGEMKGMSLSPTTVTYNILINGYSKAGNCE 360
Query: 472 -ANEKLEDLDR 481
N E++ R
Sbjct: 361 MGNRLFEEMSR 371
>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
Length = 600
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 167/357 (46%), Gaps = 16/357 (4%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T ++ L K +E L+ FD + FV +N L+ FC +
Sbjct: 118 PDVVTYNTL---LHGFCKVGKLDEALKIFDGAVKRGFVP----DVVTYNALINGFCKADK 170
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA+ + +++S P+ T N L+ G ++G V M +V +GF P+V+TY+
Sbjct: 171 LDEAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYST 227
Query: 253 RIDGYCKK-GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I G C++ A +L E+M C P + + LIHG + + +A +LF + ++
Sbjct: 228 LISGLCRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQ 287
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
+P++ YN +I L++ +N A EL + + + D +TY GL K+ +E
Sbjct: 288 GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDA 347
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ M E VP + ++ C RVD L + +G P+ + + L+ G
Sbjct: 348 LLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICG 407
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED----LDRMIK 484
C G+W++A K+ML R + + +Y +L L +A ++++ D MI+
Sbjct: 408 QCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 464
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/331 (26%), Positives = 150/331 (45%), Gaps = 14/331 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
+AL+ F L+ + P + + L + ++A+EL S + + P +T
Sbjct: 276 EALKLFGSVLRQ-GYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAIT---Y 331
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++ + + K E+ L M+ + V N ++ C +K + EA +
Sbjct: 332 TVFIDGLCKAGRVEDALLMLKDMDEKGCVP----DVVSHNAVINGLCKEKRVDEAEVLLS 387
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK-- 259
+ ++ +PN + N L+ G +G + EM+ RG +P+VVTYNI +DG CK
Sbjct: 388 GMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKAR 447
Query: 260 -KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+G +A+ LF+ M +P + T + LI G G + AR+L M + P++
Sbjct: 448 QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVY 507
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN++IS L ++ A+EL M EK D +TY T+ L K ++ L+D
Sbjct: 508 TYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALALFDGS 567
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+E VP + L+ C RVD L L
Sbjct: 568 LEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 134/302 (44%), Gaps = 34/302 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+ + C + +A++VF + F PN T N LL G G ++ + Y M+
Sbjct: 53 FNIYISGLCRASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMI 112
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G+ P VVTYN + G+CK G +A+++F+ + +P + T LI+G +
Sbjct: 113 KAGYSPDVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLD 172
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIR------------------------------ 329
+A+++ M +L PD+ YN++++ L +
Sbjct: 173 EAQRILQRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGL 232
Query: 330 CRD---LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
CR+ L +A +L+++M D V+Y+ + GL + G+ KL+ ++ + P+
Sbjct: 233 CRELRRLESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPE 292
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +L+ RV+ L+ L+ G P + + GLC GR E+A K
Sbjct: 293 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 352
Query: 447 QM 448
M
Sbjct: 353 DM 354
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 128/266 (48%), Gaps = 5/266 (1%)
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+V+ KL+ ++P+ T+ ILL +SG + F +++++G + T+NI I G C
Sbjct: 3 TVYDKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLC 61
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ GDA +F+ M + P+ T L+ G + A+ L++ M K PD+
Sbjct: 62 RASRIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVV 121
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN ++ + L+ A+++ D ++ D VTY+ + G K+ L+ ++ RM
Sbjct: 122 TYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRM 181
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR-GR 437
+ VP T L+ C N RVD L ++D+GF P+ L++GLC R
Sbjct: 182 VSESLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRR 238
Query: 438 WEEAFECSKQMLVRRRQVSEASYRML 463
E A + ++M++ + SY L
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNAL 264
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 154/353 (43%), Gaps = 21/353 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P ++ +H LAR + +A +L V Q P + T + I +
Sbjct: 256 PDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNIL------IDGLLKEDRV 309
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
EAF E+F G+ K G E + V + C +++A + + + P+
Sbjct: 310 NEAF-----ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVV 364
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ N ++ G + V E+ M +G P+ +++N I G C+ G + AM F+EM
Sbjct: 365 SHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEM 424
Query: 274 ERVACLPSLQTITTLIHGAGLVRN---IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ P++ T L+ G R I +A LFD M ++ PD+ Y+A+I L +
Sbjct: 425 LKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKA 484
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
L+ A L+ ME K + TY+++ GL ++ +L+ M+E VP T T
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
++ C VD L L+ ++ G P L+ GLC+ R +EA +
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALK 597
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 151/350 (43%), Gaps = 38/350 (10%)
Query: 173 IRKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA 230
+R + + + V LL++ ++++A +LL + + T NI + G + +
Sbjct: 9 VRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGD 68
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ + M GF P+ +TYN + G C G DA L+E M + P + T TL+H
Sbjct: 69 AQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLH 128
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G V + +A ++FD KR PD+ YNA+I+ + L+ A ++ M + +
Sbjct: 129 GFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVP 188
Query: 351 DNVTYHTMFFGLMK-----------------------SSGLEGVCK----------LYDR 377
D VTY+++ GL K S+ + G+C+ L ++
Sbjct: 189 DVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEK 248
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M+ P + L+ V L L+G ++ +G+ P ++L+ GL R
Sbjct: 249 MVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDR 308
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
EAFE ++ + +Y + L +A ++ED M+K++
Sbjct: 309 VNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDALLMLKDMD 355
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 106/248 (42%), Gaps = 15/248 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEE 157
P + ++ L + + D+A L+S ++ P+ ++ ++ R K++
Sbjct: 360 VPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMT 419
Query: 158 TL-EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE---MKEARSVFVKLLSRF-APNN 212
T E R + V +N+L+ C ++ +KEA ++F ++ + P+
Sbjct: 420 TFKEMLKRGVKPTVV--------TYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDV 471
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T + L+ G ++G + M +G P+V TYN I G C +A+ LF
Sbjct: 472 VTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVA 531
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M C+P T T+I + +A LFD + + P G Y ++I L
Sbjct: 532 MVEKGCVPDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVAR 591
Query: 333 LNAAMELM 340
++ A++L+
Sbjct: 592 VDEALKLL 599
>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
thaliana]
Length = 630
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 159/332 (47%), Gaps = 10/332 (3%)
Query: 120 DQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A+ L++ ++ + P +L + ++ + K + ++ L F ME + GIR
Sbjct: 238 DLAFILLNKMEQGKLEPGVLIY---TTIIDGLCKNKHMDDALNLFKEMETK---GIRP-N 290
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ C +A + ++ R P+ T + L+ F + G + E Y
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV R PS+VTY+ I+G+C +A ++FE M C P + + +TLI G +
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK 410
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + +LF EM +R L + Y +I L + D + A E+ EM + + +TY+
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL K+ LE +++ + K P T ++++ C +V+ G +L+ L +
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK 530
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P A + +++G C +G EEA K+M
Sbjct: 531 GVKPDVVAYNTMISGFCRKGSKEEADALFKEM 562
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/379 (25%), Positives = 168/379 (44%), Gaps = 20/379 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWEL---MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P+ F K L +A+M FD L M ++ H + SI+++ +
Sbjct: 79 PSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHY----TYSILINCFCRRSQLPL 134
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNN 212
L +M K G E + LL +C K + EA ++ ++ ++ + PN
Sbjct: 135 ALAVLGKM--------MKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNT 186
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N L+ G + MV +G +P +VTY + ++G CK+G A L +
Sbjct: 187 VTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNK 246
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
ME+ P + TT+I G +++ A LF EM + ++P++ Y+++IS L
Sbjct: 247 MEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGR 306
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A L+ +M E++I D T+ + +K L KLYD M++ P T
Sbjct: 307 WSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSS 366
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ FC++ R+D ++ +++ + P + L+ G C R +E E ++M R
Sbjct: 367 LINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRG 426
Query: 453 RQVSEASYRMLQRYLVQAN 471
+ +Y L + L QA
Sbjct: 427 LVGNTVTYTTLIQGLFQAG 445
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/295 (25%), Positives = 130/295 (44%), Gaps = 17/295 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
F+ DAF K ++ + +D+ V+R+ PS++T S+ ++ +E
Sbjct: 329 FSALIDAFVKEGKLVEAEKLYDEM------VKRSIDPSIVTYSSL---INGFCMHDRLDE 379
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ F+ M + F + + + L++ FC K + E +F ++ R N T
Sbjct: 380 AKQMFEFMVSKHCFPDVVSYST-----LIKGFCKAKRVDEGMELFREMSQRGLVGNTVTY 434
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G ++GD + + EMV G P+++TYN +DG CK G AM +FE ++R
Sbjct: 435 TTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQR 494
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T +I G + LF + + +KPD+ AYN MIS R
Sbjct: 495 SKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEE 554
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A L EM+E ++ Y+T+ ++ E +L M F T+
Sbjct: 555 ADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 609
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 64/287 (22%), Positives = 118/287 (41%), Gaps = 36/287 (12%)
Query: 234 FYHEMVLRGFRPSVVTY-----------------------------------NIRIDGYC 258
+ EMV PS++ + +I I+ +C
Sbjct: 68 LFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFC 127
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
++ A+ + +M ++ P++ T+++L++G + I +A L D+M +P+
Sbjct: 128 RRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTV 187
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I L + A+ L+D M K D VTY + GL K + L ++M
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKM 247
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+GK P ++ C N +D LNL+ + +G P+ L++ LC+ GRW
Sbjct: 248 EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIK 484
+A M+ R+ ++ L V+ + E L D M+K
Sbjct: 308 SDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 34/172 (19%), Positives = 76/172 (44%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF EM K P I ++ ++S++ + + + L ++M+ + H++ TY
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSI 121
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S L + +M++ + P T+ L+ +C + R+ + L + G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ P+ + L+ GL + EA +M+ + Q +Y ++ L +
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 74/178 (41%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF EM + PS+ + L+ + L ++M + + Y+ +I
Sbjct: 64 DAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILI 123
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L A+ ++ +M + + VT ++ G S + L D+M +
Sbjct: 124 NCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQ 183
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T T L+ ++ + + L ++ +G P ++V GLC RG + AF
Sbjct: 184 PNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
>gi|410109911|gb|AFV61035.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
alba]
Length = 413
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 101/353 (28%), Positives = 163/353 (46%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L ++RYF W + + +P+ +L +I
Sbjct: 73 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLRYFKLVWGFYEEILECGYPA--SLYFFNI 129
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 130 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 182 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 240
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + LP L T TLI+G +++QA L DEM + LKPD
Sbjct: 241 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEMSMKGLKPDKF 300
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+AA E M ++ I D+V Y + GL + K+ M
Sbjct: 301 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEGRPVDAEKMLREM 360
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 361 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPSVXTYNVLMNG 413
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 171 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C ++ L +
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHGLIDEM 290
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y + L Q
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTAIISGLCQEG-- 348
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 349 -RPVDAEKMLREMLSVGLKPDT 369
>gi|357131182|ref|XP_003567219.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15010,
mitochondrial-like [Brachypodium distachyon]
Length = 518
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 177/405 (43%), Gaps = 13/405 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S TLV L RL ++ A F + P + P A L ILA+ R FD A
Sbjct: 99 SETLVVAALSRL---RNSWAAAHAAFLWAAAQPDYAPGRHACHSMLAILAKHRRFDDARA 155
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L+ ++R SL + +++ +++ R + + AF + F + G +F+ L
Sbjct: 156 LLDEMRRK--SLASPRAVLLLVRRYCAARDVTRAIAAFHALPSFGF----EPGVAQFHGL 209
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGF 243
L A C K +++A + + F K+ NI+L G+ V + F+ M +RG
Sbjct: 210 LSALCRYKNVQDAEHLLLSSEKEFPFETKSFNIVLNGWCNMVCSVREAKRFWTAMEVRGI 269
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
V +Y I + K G ++LF M+ +P + +++ R + +A+
Sbjct: 270 ERDVASYGSMISCFSKAGSLDSVLKLFNGMKEAGIVPDRKVYNAVVYALAKGRCVDEAKA 329
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L M +R PD YN++I L + R + A ++ DEM + + T+H +F
Sbjct: 330 LVRSMEERGTPPDTATYNSLIGPLCKARQVQEATQMFDEMIGRGLLASVRTFHALFDVAT 389
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S V + D+M P+ T +ML++ FC + D LW + G P
Sbjct: 390 SPS---EVFDVLDKMKTLHCEPEIDTYIMLIRKFCRWRQHDSVEKLWSAMPTNGLNPDRS 446
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
A +L+ GL G+ EEA + ++M + + + M+Q +L
Sbjct: 447 AYIVLIHGLFLNGKLEEAAKYYEEMKAKGFPPEQKTESMIQAWLT 491
>gi|242049112|ref|XP_002462300.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
gi|241925677|gb|EER98821.1| hypothetical protein SORBIDRAFT_02g023500 [Sorghum bicolor]
Length = 541
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 106/415 (25%), Positives = 180/415 (43%), Gaps = 17/415 (4%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ + R+++D P L L P+ TP ++ +VL R + + +L FF F
Sbjct: 50 VGALCRVLSDFRGPRHDLRAALDGFAPRLTPAAAA---DVLRR---CRNLPVPSLRFFLF 103
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
P FT P++ LA R F L+S + R L+ ++ ++
Sbjct: 104 AAALPGFTHLPESLLILAGSLAGARLFPLLRSLLSDLPRPA---LSRDLFPLLFRAYARA 160
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
++ + AF MER F+ + + LL ++ A + F + +F +
Sbjct: 161 GLPDDAIRAFSSMERFGFLPT----VADLHSLLFTLSHNGLVEHAEAFFRESPIQFDVSA 216
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
KT IL+ G+ + + EM+ RG +P V YN ID C+ G A ++
Sbjct: 217 KTYTILISGWAVVAKPEKAQKLFDEMIERGVQPDVPAYNALIDALCRGGDVALAQEQLKD 276
Query: 273 MERVACL-PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M+R L P T + A ++ A ++ D M R+L P++ YNA+I L
Sbjct: 277 MQRSRGLAPDAATYGPFLRSACASKDARAALRVLDRMRARSLTPNVFTYNAVIRLLCELG 336
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+++ A +++EM D +Y+T+ K + +L RM EG +P +
Sbjct: 337 EVDEAYNILNEMATYGEKPDVWSYNTLLNTHCKLKEVNKALRLISRMDEGLCLPNRHSYN 396
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL-CSRGRWEEAFECS 445
M++K RVD + +W + RGF P +++ GL C +GR EEA CS
Sbjct: 397 MILKMLIAIGRVDRAIEVWDGMEKRGFHPGAATYAVMIHGLSCKKGRAEEA--CS 449
>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 713
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 7/387 (1%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F + + D+ +L+ ++R+ + + + +++ KF E
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA-DVVTYNALINCFCKFGRMETAYG 279
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F M+RE + F+ + AFC + ++EA +F ++ R A N T L+
Sbjct: 280 YFAAMKREGVMA----NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G ++G + + EMV +G +VVTY + +DG CK+ +A + ME+
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+ TTLIHG + +N +A L EM + L+ DI Y A+I L L+ A L
Sbjct: 396 ANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSL 455
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ +M+E + + + Y TM KS + + ++++ F P T L+ C
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+D ++ + + D G P+ A LV GLC G EA + +M+ + + +
Sbjct: 516 AGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVV 575
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIKN 485
Y +L YL Q N ++ +MI +
Sbjct: 576 YTALLDGYLKQGNLHDAFALKAKMIDS 602
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 186/437 (42%), Gaps = 51/437 (11%)
Query: 16 ISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGR 75
IS RL LL S QS +R+ HP P H L HL L + VL R
Sbjct: 39 ISHRLRLLRSL--QSVPADRLL----SHPLPSTA-HACLAAHLLARDRLYAH-SRRVLSR 90
Query: 76 LFAAHSNGLKA-----LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
L A L A L L P + + L +LA D A ++ V+
Sbjct: 91 LVALRRPHLAASLVDLLHRAALALG-PRRSALASVVDTLLSVLADRGLLDDAVRAVARVR 149
Query: 131 --RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
R P+ T + + L+R + R+ R +F + FN+++
Sbjct: 150 ELRVPPNTRTCNHILLRLAR-----------DRSGRLVRRLFEQLPAPNVFTFNIVIDFL 198
Query: 189 CTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C + E+ EARS+F ++ P+ T N L+ G+ + G++ +E EM G + V
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADV 258
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQL 304
VTYN I+ +CK G A F M+R + ++ T +T + GLVR +A +L
Sbjct: 259 VTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR---EAMKL 315
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL-- 362
F +M R + + Y +I + L+ A+ L+DEM + + + VTY + GL
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375
Query: 363 -------------MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
M+ +G+ LY +I G F+ K + + N ++L ++L
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435
Query: 410 WGYLIDRGFCPHGHALD 426
+G LI +G C + H LD
Sbjct: 436 YGALI-QGLC-NVHKLD 450
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 23/267 (8%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R PN +T N +LL + + ++ P+V T+NI ID CK+G +A
Sbjct: 152 RVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEA 207
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF M+ + CLP + T +LI G G + + QL +EM + K D+ YNA+I+
Sbjct: 208 RSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINC 267
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ + A M+ + + + VT+ T K + KL+ +M
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C R+D + L ++ +G + +LV GLC
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC------------- 374
Query: 447 QMLVRRRQVSEAS--YRMLQRYLVQAN 471
+ R+V+EA RM+++ V+AN
Sbjct: 375 ----KERKVAEAEDVLRMMEKAGVRAN 397
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q C ++ EA+S+ K+ S PN ++ +SG V +++
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
GF+P+V+TY IDG CK G +A+ F +M + P++Q T L+ GL +N
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD--GLCKNGC 553
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+++A QLF+EM + + D Y A++ ++ +L+ A L +M + + D Y
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
G + + +++ MI P
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAP 641
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 34/287 (11%)
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY----------------------FD 120
G++A E TL H HF EK L +L+ M+ D
Sbjct: 393 GVRANELLYTTLIHGHFMNKNS--EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 121 QAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+A L++ + + P+ + +M + K EA +++ + G +
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP------EAIAMLQKILDSGFQP-NV 503
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + EA S F K+ PN + L+ G ++G + ++E
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV +G V Y +DGY K+G DA L +M L T I G +
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+ +AR++F EM + PD YN +IS + +L A+ L DEME
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 621
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 118/475 (24%), Positives = 196/475 (41%), Gaps = 63/475 (13%)
Query: 57 HLPQTTPLSSTLVENVLGRLFAAHSNGL-------------------KALEFFK-FTLQH 96
L +T L + L + GR+F++ S+G A++ F+ T
Sbjct: 8 RLLETGTLRTALFLSCYGRVFSSVSDGKGKVSYRERLRSGIVDIKEDDAVDLFQEMTRSR 67
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
P P F + ++AR + +D +L ++ + L ++SIM++ + +
Sbjct: 68 PR--PRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAH-NLYTLSIMINCCCRCRKLS 124
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
AF M + I +G + F+ L+ C + + EA + +++ P T+
Sbjct: 125 L---AFSAMGKIIKLGYEP-DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITL 180
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G +G V+ + MV GF+P+ VTY
Sbjct: 181 NALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEE 240
Query: 251 ----------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+I IDG CK G +A LF EME + TTLI G
Sbjct: 241 RKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDD 300
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
+L +M KR + PD+ A++A+I ++ L A EL EM ++ I D VTY ++
Sbjct: 301 GAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLID 360
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K + L+ + D M+ P RT +L+ +C +D GL L+ + RG
Sbjct: 361 GFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVA 420
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ L+ G C G+ E A E ++M+ RR + SY++L L EK
Sbjct: 421 DTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEK 475
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/346 (23%), Positives = 149/346 (43%), Gaps = 10/346 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + L ++ + A EL+ ++ L +K SI++ + K S +
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVK-YSIIIDGLCKDGSLDNA 266
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
F+ ME I+ F ++ + L++ FC + + ++ R P+
Sbjct: 267 FNLFNEME------IKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ F + G + E + EM+ RG P VTY IDG+CK+ A + + M
Sbjct: 321 SALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVS 380
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+++T LI+G I +LF +M R + D YN +I L
Sbjct: 381 KGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A EL EM +R+ D V+Y + GL + E ++++++ + K +++
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C +VD +L+ L +G P ++++ GLC +G EA
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ +C + + +F K+ L + T N L+ GF E G + + + EMV
Sbjct: 390 FNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMV 449
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R RP +V+Y I +DG C G A+ +FE++E+ + +IHG +
Sbjct: 450 SRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 509
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KPD+ YN MI L + L+ A L +MEE + TY+ +
Sbjct: 510 DAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILI 569
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ KL + + F TV M++
Sbjct: 570 RAHLGEGDATKSAKLIEEIKRCGFSVDASTVKMVVDML 607
>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
Length = 608
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 187/401 (46%), Gaps = 11/401 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH-VQRTH-PSLLTLKSMSIMLSRISKFQSYEET 158
PT F ++ L +A EL + V+R H P+++ S + +++ + K +
Sbjct: 156 PTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVI---SYNTIINGLCKTGNTSMA 212
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
++ F +ME+ G + +N ++ + C + + +A ++L R PN T N
Sbjct: 213 VDVFKKMEQN---GCKP-DVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNC 268
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ GF G + + EMV R P VT I +DG CK+G +A +FE M
Sbjct: 269 MVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG 328
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ T L+ G L R +++A+++F+ M ++ P + +YN +I+ + R ++ A
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAK 388
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ EM K + D VTY T+ GL + + ++ M +P T +L+ F
Sbjct: 389 SLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGF 448
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + +D L L + ++ P+ +L+ G+ G+ E A E ++ + +
Sbjct: 449 CKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTI 508
Query: 458 ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
+Y ++ + L++ +++ DL R +++ LP V
Sbjct: 509 RTYTVMIKGLLKEGLSDEAYDLFRKMED-DGFLPNSCSYNV 548
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
NVL+ C + A S+ K+ P T N L+ G G + ++EMV
Sbjct: 126 LNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMV 185
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+V++YN I+G CK G A+ +F++ME+ C P + T T+I R ++
Sbjct: 186 RRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVN 245
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + EM R + P++ YN M+ LN A L EM + + D VT +
Sbjct: 246 DAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILV 305
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +++ M E P T LM +C+ ++ ++ +I +G
Sbjct: 306 DGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCA 365
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P H+ ++L+ G C R +EA +M + +Y L + L Q
Sbjct: 366 PGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 415
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
G +N+L+ FC + M EA+S+ ++ + P+ T + L+ G + G +
Sbjct: 367 GVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIF 426
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM G P++VTY+I +DG+CK G +A++L + M+ P++ T LI G +
Sbjct: 427 KEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIA 486
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A++LF ++ ++P I Y MI L++ + A +L +ME+ ++ +Y
Sbjct: 487 GKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 546
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ M G +++ +L D M+ +F T ML+
Sbjct: 547 NVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 133/283 (46%), Gaps = 3/283 (1%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+L+ C + + EAR VF + + PN T N L+ G+ + + + M+ +
Sbjct: 303 ILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQ 362
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P V +YNI I+G+CK +A L EM A P T +TL+ G +A
Sbjct: 363 GCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEA 422
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF- 360
+F EM L P++ Y+ ++ + L+ A++L+ M+EK++ N+ +HT+
Sbjct: 423 LNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL-EPNIVHHTILIE 481
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G+ + LE +L+ ++ P RT +++K D +L+ + D GF P
Sbjct: 482 GMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLP 541
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ + ++++ G A +M+ +R + ++++ML
Sbjct: 542 NSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQML 584
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 141/333 (42%), Gaps = 41/333 (12%)
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNN 212
S ++ L +F RM R + R EF L +F +K+ S+ ++ L N
Sbjct: 68 SIDDALASFYRMVR---MNPRP-SVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNV 123
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
++N+L+ V +M G P+ T+N I+G C +G +A+ LF E
Sbjct: 124 YSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNE 183
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M R P++ + T+I+G N A +F +M + KPD+ YN +I SL + R
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+N AME + EM ++ I + TY+ M G
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHG------------------------------- 272
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
FC+ +++ L+ ++ R P L +LV GLC G EA + M +
Sbjct: 273 ----FCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKG 328
Query: 453 RQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ + ++Y ++ Y +Q NE + + MI+
Sbjct: 329 VEPNISTYNALMDGYCLQRLMNEAKKVFEIMIR 361
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 118/250 (47%), Gaps = 1/250 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C Q+ M EA+ VF + + AP + NIL+ GF +S + + EM
Sbjct: 336 YNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMY 395
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VTY+ + G C+ G +A+ +F+EM LP+L T + L+ G ++
Sbjct: 396 HKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLD 455
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L M ++ L+P+I + +I + L A EL ++ I TY M
Sbjct: 456 EALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMI 515
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+K + L+ +M + F+P + + ++++ F N + L ++ + F
Sbjct: 516 KGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFS 575
Query: 420 PHGHALDLLV 429
+ +L+
Sbjct: 576 ANLSTFQMLL 585
>gi|326531326|dbj|BAK05014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 537
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 96/386 (24%), Positives = 170/386 (44%), Gaps = 18/386 (4%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR 131
VL L SN AL FF + P + P + + L IL RM+ +L +
Sbjct: 115 VLKVLQKQRSNWQVALLFFTWAAGLPTYEHGPRTYIEMLDILGRMKKVRLMRQLFDEIPE 174
Query: 132 THPSLLTLKSM-SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQ 186
L+ M +++L+R + +E +E IF +G E F +LL
Sbjct: 175 QRRGLVVTNRMFAVLLNRYAGAHKVQEAIE--------IFYKRNDYGFEVDLVGFQILLM 226
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
+ C K ++EA ++F++ F P K+ NI+L G+ G + + ++E++ +P
Sbjct: 227 SLCRYKHVEEAEALFLQKKDEFPPVIKSWNIILNGWCVKGSLPDAKRVWNEIIASKLKPD 286
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ TY I+ K G A++LF M P + +I + I +A ++F
Sbjct: 287 LFTYGTFINALTKAGKLSTAVKLFTSMWEKGINPDVAICNCIIDQLCFKKKIPEALKIFG 346
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R + D+ YN +I + R EL+D+ME+K +N+TY + L +
Sbjct: 347 EMNDRGCQADVATYNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYT---YILKTTE 403
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHGHAL 425
V L RM E + T +++ + V+ + + G+ +W + G P +
Sbjct: 404 KPRDVMNLIQRMEESGCKLDSDTYNLILNLY-VSMKYEKGVQQVWEEMERNGSGPDQRSF 462
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVR 451
++V GL S+G+ ++A + M R
Sbjct: 463 TIMVHGLHSQGQLDQALQYYTTMKSR 488
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 4/137 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC + ++ + + + +PNN T +L ++ DV + M
Sbjct: 360 YNTLIKHFCKIRRTEKVYELLDDMEKKGCSPNNMTYTYILKTTEKPRDVMNL---IQRME 416
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + TYN+ ++ Y +++EEMER P ++ T ++HG +
Sbjct: 417 ESGCKLDSDTYNLILNLYVSMKYEKGVQQVWEEMERNGSGPDQRSFTIMVHGLHSQGQLD 476
Query: 300 QARQLFDEMPKRNLKPD 316
QA Q + M R + P+
Sbjct: 477 QALQYYTTMKSRGMTPE 493
>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 145/325 (44%), Gaps = 8/325 (2%)
Query: 160 EAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKT 214
E R + IF IRK G + FN L+ C + + E R +R P+ T
Sbjct: 236 EGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFT 295
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
++L+ G + G + E + EM RG RP+ +T+ IDG C+ AM + +M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQML 355
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P L TL++G V ++++AR+L DEM +KPD Y +I + DL
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+AME+ M E+ + DNV + + G + + + M+E P T M++
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C V +G L + G P ++L+ GLC +G+ + A + ML
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535
Query: 455 VSEASYRMLQRYLVQANANEKLEDL 479
+ +Y +L L N K EDL
Sbjct: 536 PDDITYNIL---LEGHCKNGKAEDL 557
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 139/302 (46%), Gaps = 5/302 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ FC + +++A+ +F ++ R P + N L+ G +S ++ M
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TY++ I G CK+G A +LF+EM++ P+ T T LI G R I
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRID 345
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + +M +KPD+ YN +++ L + D+N A +L+DEM + D +TY T+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLI 405
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K LE ++ M E V L+ FC + RV +++ G
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ----ANANEK 475
P +++ G C +G + F+ K+M + + +Y +L L + NAN
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 476 LE 477
LE
Sbjct: 526 LE 527
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P + NIL+ F + G + ++ ++E+ RG RP+ V++N I+G CK +
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
RL + ME P + T + LIHG + A QLFDEM +R L+P+ + A+I
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R R +++AM +M + D V Y+T+ GL K + KL D M P
Sbjct: 339 CRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDK 398
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ +C ++ + + + + G A L++G C GR +A ++
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 448 MLVRRRQVSEASYRML 463
M+ + +A+Y M+
Sbjct: 459 MVEAGMKPDDATYTMV 474
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 125/312 (40%), Gaps = 45/312 (14%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT +F ++ L + R D+ + L ++ R +P + T S+++ + K +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTY---SVLIHGLCKEGRLDVA 312
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+ FD M++ G+R G F L+ C + + A + + ++L+ P+ N
Sbjct: 313 EQLFDEMQQR---GLRPNGIT-FTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG---------------- 261
LL G + GDV EM + G +P +TY IDGYCK+G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 262 -------------------CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
DA R EM P T T +I G N+
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L EM KP + YN +++ L + + A L++ M + D++TY+ + G
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548
Query: 363 MKSSGLEGVCKL 374
K+ E + KL
Sbjct: 549 CKNGKAEDLLKL 560
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 68/308 (22%), Positives = 117/308 (37%), Gaps = 27/308 (8%)
Query: 186 QAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
Q++C A +F + S I+ G +A +F + G R
Sbjct: 102 QSYCAMANFLSAHQMFQECQS----------IIRFLVSRKGKDSAASVFAAILDTAGTRC 151
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG--LVRNIHQARQ 303
S ++ + Y G DA++ F L HG G L + I+
Sbjct: 152 SNFVFDALMIAYWDSGFVSDAIQCFR-------LVRNSNFQIPFHGCGYLLDKMINSNSP 204
Query: 304 L-----FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ + E+ + P + YN +I+ + + A + +E+ ++ + V+++T+
Sbjct: 205 VTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTL 264
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL KS L+ +L M E + P T +L+ C R+D+ L+ + RG
Sbjct: 265 INGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ---ANANEK 475
P+G L+ G C R + A QML + Y L L + N K
Sbjct: 325 RPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384
Query: 476 LEDLDRMI 483
L D RM+
Sbjct: 385 LVDEMRMV 392
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
+R RE+ K + +++ +C + +K + ++ ++ P T N+L+ G
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ G + M M+ G P +TYNI ++G+CK G D ++L E
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563
>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
Length = 481
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 113/420 (26%), Positives = 174/420 (41%), Gaps = 38/420 (9%)
Query: 44 PFPDQPLHPTLLQHLPQTT-------------PLSSTLVENVLGRLFAAHSNGLKALEFF 90
P P LHP LL LP PL +T N++ R A ++ALE
Sbjct: 82 PIPVASLHP-LLSSLPSAPAFALFADIYRLRLPLCTTTF-NIMLRHLCATGKPVRALELL 139
Query: 91 KFTLQHPHFTPTPDAFEKTLHI---LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLS 147
+ P P+A I AR R A E+M ++ + + ++S
Sbjct: 140 RQM-------PRPNAVTYNTVIAGFCARGR-VQAALEVMREMRERGGIAPDKYTYATLIS 191
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
K E+ + FD M + G + +N L+ +C + ++ A ++ R
Sbjct: 192 GWCKIGRMEDAAKVFDEM---LTQGEVAPSAVMYNALIGGYCDRGKLDVALQYREDMVQR 248
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
A T N+L+ G + EM G P V TYNI I+GYCK+G A
Sbjct: 249 GVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYNILINGYCKEGNEKKA 308
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ +FEEM R + T T+LI+ + + +LF K+ ++PD+ YNA+I+S
Sbjct: 309 LEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKKGIRPDVVMYNALINS 368
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
D+ A E+M EME+KRI D+VTY+T+ G L+ L D M + P
Sbjct: 369 HCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEARGLIDEMTKRGIQPD 428
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
C N + D NL ++ +G P L+ GL + A + +K
Sbjct: 429 LG--------LCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEGLTTVDEQMSAADAAK 480
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 81/189 (42%), Gaps = 42/189 (22%)
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHTM 358
+A +L +MP+ P+ YN +I+ + AA+E+M EM E+ I D TY T+
Sbjct: 134 RALELLRQMPR----PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATL 189
Query: 359 FFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
G K +E K++D M+ +G+ P + VM
Sbjct: 190 ISGWCKIGRMEDAAKVFDEMLTQGEVAP---SAVMY------------------------ 222
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL-VQANANEKL 476
+ L+ G C RG+ + A + + M+ R ++ A+Y +L L + A++
Sbjct: 223 --------NALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAY 274
Query: 477 EDLDRMIKN 485
L+ M +N
Sbjct: 275 AVLEEMQRN 283
>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
Length = 775
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 99/417 (23%), Positives = 181/417 (43%), Gaps = 48/417 (11%)
Query: 113 LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM----- 165
LAR F++ ELM + P+++T I+++ + KF+ ++ LE ++M
Sbjct: 315 LAREGNFNRMNELMEKMVEMDIQPNVVTF---GILINHMCKFRRVDDALEVLEKMSGGKE 371
Query: 166 --------EREIFV------GIRKFGSEE---------------------FNVLLQAFCT 190
E ++ + G+ K G ++ +N L+ FC
Sbjct: 372 SGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCK 431
Query: 191 QKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
E+++ + +F ++ APN T+N L+ G +G V++ F+ E RG + VT
Sbjct: 432 AGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVT 491
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I+ +C F AM LF EM + C P TLI G + A + E+
Sbjct: 492 YTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K ++PD YN +I R + E++ EMEE + D +TY+T+ K+ L+
Sbjct: 552 KLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLK 611
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL-DLL 428
K+ +MI+ VP T ++ +C+N + + ++ + P + ++L
Sbjct: 612 FAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNIL 671
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL-EDLDRMIK 484
+ LC + + A + M + + +Y + + L EK+ E +DRMI+
Sbjct: 672 INSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIE 728
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 137/331 (41%), Gaps = 49/331 (14%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
D F K I FD+ + + P+++T+ ++ + R + S + F
Sbjct: 427 DGFCKAGEIEKGKELFDEM-----NKEGVAPNVVTVNTLVGGMCRTGRVSS---AVNFFV 478
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
+R G + + L+ AFC ++A +F ++L S +P+ L+ GF
Sbjct: 479 EAQRRGMKG----DAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGF 534
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME-------- 274
++G + E+ G RP V YN I G+C+ F + +EME
Sbjct: 535 SQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDT 594
Query: 275 ---------------------------RVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+ +P++ T +I+ L N ++A ++F +
Sbjct: 595 ITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKD 654
Query: 308 M-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
M + P+ YN +I+SL + + +A+ LM++M+ + + TY+ +F GL
Sbjct: 655 MKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEK 714
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
LE V + DRMIE P T+ +L ++
Sbjct: 715 DLEKVFEFMDRMIEHACNPDYITMEILTEWL 745
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 124/317 (39%), Gaps = 45/317 (14%)
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF---------CTQKEM 194
I+ S + K + EE L E EI + KFG E VL+ +F C ++
Sbjct: 234 ILFSFLLKRERNEELLS-----EDEIVNLVLKFG--EHGVLISSFWMGRLITRLCRNRKT 286
Query: 195 KEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+F +++ A + N LL G G+ M +MV +P+VVT+ I
Sbjct: 287 NRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGIL 346
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+ CK DA+ + E+M G I + +
Sbjct: 347 INHMCKFRRVDDALEVLEKM----------------SGGKESGGISVS-----------V 379
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+PD+ YN +I L + + LM+ M +K D +TY+ + G K+ +E
Sbjct: 380 EPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGK 439
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+L+D M + P TV L+ C RV +N + RG L+
Sbjct: 440 ELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAF 499
Query: 433 CSRGRWEEAFECSKQML 449
C+ +E+A E +ML
Sbjct: 500 CNVNNFEKAMELFNEML 516
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 102/227 (44%), Gaps = 10/227 (4%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF EM ++ + +L+ G N ++ +L ++M + +++P++ + +I+ +
Sbjct: 292 LFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMC 351
Query: 329 RCRDLNAAMELMDEMEEKR--------IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ R ++ A+E++++M + + D V Y+T+ GL K + L +RM
Sbjct: 352 KFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRS 411
Query: 381 GK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
K P T T L+ FC ++ G L+ + G P+ ++ LV G+C GR
Sbjct: 412 QKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVGGMCRTGRVS 471
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRMIKN 485
A + R + +Y L N EK +E + M+K+
Sbjct: 472 SAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKS 518
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 8/128 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVF--VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ ++ A+C EA +F +K S+ PN NIL+ ++ V + +M
Sbjct: 632 YGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDM 691
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV---ACLPSLQTITTLIHGAGLV 295
+ G P+ TYN G + D ++FE M+R+ AC P T+ L V
Sbjct: 692 KIWGVTPNTTTYNAIFKGLRDE---KDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAV 748
Query: 296 RNIHQARQ 303
I + ++
Sbjct: 749 GEIERLKK 756
>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
Length = 687
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 171/387 (44%), Gaps = 7/387 (1%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F + + D+ +L+ ++R+ + + + +++ KF E
Sbjct: 221 PDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKA-DVVTYNALINCFCKFGRMETAYG 279
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F M+RE + F+ + AFC + ++EA +F ++ R A N T L+
Sbjct: 280 YFAAMKREGVMA----NVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G ++G + + EMV +G +VVTY + +DG CK+ +A + ME+
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+ TTLIHG + +N +A L EM + L+ DI Y A+I L L+ A L
Sbjct: 396 ANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSL 455
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ +M+E + + + Y TM KS + + ++++ F P T L+ C
Sbjct: 456 LTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCK 515
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+D ++ + + D G P+ A LV GLC G EA + +M+ + + +
Sbjct: 516 AGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVV 575
Query: 460 Y-RMLQRYLVQANANEKLEDLDRMIKN 485
Y +L YL Q N ++ +MI +
Sbjct: 576 YTALLDGYLKQGNLHDAFALKAKMIDS 602
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 186/437 (42%), Gaps = 51/437 (11%)
Query: 16 ISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGR 75
IS RL LL S QS +R+ HP P H L HL L + VL R
Sbjct: 39 ISHRLRLLRSL--QSVPADRLL----SHPLPSTA-HACLAAHLLARDRLYAH-SRRVLSR 90
Query: 76 LFAAHSNGLKA-----LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
L A L A L L P + + L +LA D A ++ V+
Sbjct: 91 LVALRRPHLAASLVDLLHRAALALG-PRRSALASVVDTLLSVLADRGLLDDAVRAVARVR 149
Query: 131 --RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
R P+ T + + L+R + R+ R +F + FN+++
Sbjct: 150 ELRVPPNTRTCNHILLRLAR-----------DRSGRLVRRLFEQLPAPNVFTFNIVIDFL 198
Query: 189 CTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C + E+ EARS+F ++ P+ T N L+ G+ + G++ +E EM G + V
Sbjct: 199 CKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADV 258
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQL 304
VTYN I+ +CK G A F M+R + ++ T +T + GLVR +A +L
Sbjct: 259 VTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVR---EAMKL 315
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL-- 362
F +M R + + Y +I + L+ A+ L+DEM + + + VTY + GL
Sbjct: 316 FAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCK 375
Query: 363 -------------MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
M+ +G+ LY +I G F+ K + + N ++L ++L
Sbjct: 376 ERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISL 435
Query: 410 WGYLIDRGFCPHGHALD 426
+G LI +G C + H LD
Sbjct: 436 YGALI-QGLC-NVHKLD 450
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 115/267 (43%), Gaps = 23/267 (8%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R PN +T N +LL + + ++ P+V T+NI ID CK+G +A
Sbjct: 152 RVPPNTRTCNHILLRLARDRSGRLVRRLFEQLP----APNVFTFNIVIDFLCKEGELAEA 207
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF M+ + CLP + T +LI G G + + QL +EM + K D+ YNA+I+
Sbjct: 208 RSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINC 267
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ + A M+ + + + VT+ T K + KL+ +M
Sbjct: 268 FCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALN 327
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C R+D + L ++ +G + +LV GLC
Sbjct: 328 EFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLC------------- 374
Query: 447 QMLVRRRQVSEAS--YRMLQRYLVQAN 471
+ R+V+EA RM+++ V+AN
Sbjct: 375 ----KERKVAEAEDVLRMMEKAGVRAN 397
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 98/208 (47%), Gaps = 5/208 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q C ++ EA+S+ K+ S PN ++ +SG V +++
Sbjct: 436 YGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKIL 495
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
GF+P+V+TY IDG CK G +A+ F +M + P++Q T L+ GL +N
Sbjct: 496 DSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVD--GLCKNGC 553
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+++A QLF+EM + + D Y A++ ++ +L+ A L +M + + D Y
Sbjct: 554 LNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTC 613
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
G + + +++ MI P
Sbjct: 614 FISGFCNLNMMPEAREVFSEMIGHGIAP 641
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 115/287 (40%), Gaps = 34/287 (11%)
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY----------------------FD 120
G++A E TL H HF EK L +L+ M+ D
Sbjct: 393 GVRANELLYTTLIHGHFMNKNS--EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLD 450
Query: 121 QAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+A L++ + + P+ + +M + K EA +++ + G +
Sbjct: 451 EAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVP------EAIAMLQKILDSGFQP-NV 503
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + EA S F K+ PN + L+ G ++G + ++E
Sbjct: 504 ITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNE 563
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV +G V Y +DGY K+G DA L +M L T I G +
Sbjct: 564 MVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNM 623
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+ +AR++F EM + PD YN +IS + +L A+ L DEME
Sbjct: 624 MPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDEME 670
>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
[Vitis vinifera]
gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
Length = 890
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 107/424 (25%), Positives = 183/424 (43%), Gaps = 35/424 (8%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P+ HP+L + LP TP + + LFA + + AL FF + P F +
Sbjct: 51 PNWQKHPSLRKLLPSLTP-------SHVSSLFAFNLDPQTALSFFNWIALRPGFKHNVHS 103
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE---TLEAF 162
+ L+IL R R A + I +S I S E+ LE F
Sbjct: 104 YSSMLNILIRARLLGVAEK-------------------IRISMIKSCCSIEDVLFVLEVF 144
Query: 163 DRMEREIFVGIRKFGS--EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
+M + G KF +N +L + + E ++V+++LL ++ +PN T N ++
Sbjct: 145 RKMNAD---GEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMV 201
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ + G+V E++ ++V G P TY I G+C+ +A +F M + C
Sbjct: 202 NGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQ 261
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+ + T LIHG I++A +LF +M + N P + Y +I +L A+ L
Sbjct: 262 RNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNL 321
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+EM+EK + TY + GL K + ++ K+ M E +P T L+ +C
Sbjct: 322 FNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCK 381
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+D + + P+ + L+ GLC + + +A +ML R+ S +
Sbjct: 382 EGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLIT 441
Query: 460 YRML 463
Y L
Sbjct: 442 YNSL 445
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 152/333 (45%), Gaps = 10/333 (3%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
E+F+ + + G + + L+ C + EA +F + P +T +L+
Sbjct: 250 EVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYAL 309
Query: 223 KESG-DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
SG V A+ +F +EM +G P+V TY + IDG CK+ +A ++ EM +PS
Sbjct: 310 SGSGRKVEALNLF-NEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPS 368
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T LI G I A ++ D M + P+ YN +I L + R ++ AM L++
Sbjct: 369 VVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLN 428
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M E+++ +TY+++ G K + LE +L M E VP T + + C
Sbjct: 429 KMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEG 488
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
RV+ L+ + +G + L+ G C G+ + A+ ++ML + +Y
Sbjct: 489 RVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYN 548
Query: 462 MLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
+L L + +K+++ ++ + + PT
Sbjct: 549 VLIEGLCK---EKKMKEASSLVAKMLTMGVKPT 578
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 167/395 (42%), Gaps = 21/395 (5%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
++ +H L ++A +L + + + T+++ ++++ +S E L F+
Sbjct: 266 SYTNLIHGLCEAGRINEALKLFADMTEDN-CCPTVRTYTVLIYALSGSGRKVEALNLFNE 324
Query: 165 MEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
M+ + G E + VL+ C + +M EAR + ++ + P+ T N L+
Sbjct: 325 MKEK--------GCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALI 376
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ + G + M P+ TYN I G CKK AM L +M
Sbjct: 377 DGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLS 436
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PSL T +LIHG V ++ A +L M + L PD Y+ I +L + + A L
Sbjct: 437 PSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTL 496
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
D ++ K + + V Y + G K ++ L +RM+ +P + T +L++ C
Sbjct: 497 FDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCK 556
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
++ +L ++ G P +L+ + G ++ A + M+ Q +
Sbjct: 557 EKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCT 616
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIK--NLQAVLP 491
Y L Y Q LE++D +I N + +LP
Sbjct: 617 YTAFLHAYFSQG----MLEEVDDVIAKMNEEGILP 647
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/261 (22%), Positives = 106/261 (40%), Gaps = 1/261 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C +++ A R + + + P+ T ++ + + G V + +
Sbjct: 442 YNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVK 501
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + + V Y IDGYCK G A L E M ACLP+ T LI G + +
Sbjct: 502 AKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMK 561
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M +KP + Y +I +++ + A+++ + M D TY
Sbjct: 562 EASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFL 621
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
LE V + +M E +P T +L+ + + ++D G
Sbjct: 622 HAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCK 681
Query: 420 PHGHALDLLVTGLCSRGRWEE 440
P + + +L+ L R +E
Sbjct: 682 PSLYIVSILIKNLSHENRMKE 702
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 109/244 (44%), Gaps = 1/244 (0%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F+P++ YN + K + ++ E+ P++ T +++G + N+ +A
Sbjct: 155 FKPTLRCYNTILMSLSKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCKIGNVVEAE 214
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
++ + L PD Y ++I R + ++ A E+ M +K + V+Y + GL
Sbjct: 215 LYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVSYTNLIHGL 274
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ + KL+ M E P RT +L+ + R LNL+ + ++G P+
Sbjct: 275 CEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNV 334
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDR 481
H +L+ GLC + +EA + +M + S +Y ++ Y + ++ E LD
Sbjct: 335 HTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDL 394
Query: 482 MIKN 485
M N
Sbjct: 395 MESN 398
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 132/342 (38%), Gaps = 58/342 (16%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL----------------- 219
S +NVL++ C +K+MKEA S+ K+L+ P T IL+
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFN 603
Query: 220 ----LGFKESGDVTAMEMFYH----------------EMVLRGFRPSVVTYNIRIDGYCK 259
LG++ DV F H +M G P +VTY + IDGY +
Sbjct: 604 HMVSLGYQP--DVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYAR 661
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIH---------------GAGLVRNIHQ---A 301
G A + M C PSL ++ LI G V N + A
Sbjct: 662 LGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIA 721
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+LF++M + D+ Y A+I+ + L A L+ M+E+ + Y+++
Sbjct: 722 LKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDC 781
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K +L D M+E +P + +L+ + + ++ L+ G+
Sbjct: 782 CCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYD 841
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
A +L+ GL R +E E M + Q + +Y +L
Sbjct: 842 EVAWKVLIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLL 883
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 21/204 (10%)
Query: 182 NVLLQAFCTQKEMKEARS--------------VFVKLLSRFAPNNKTMNI-----LLLGF 222
++L++ + MKE RS + +KL + + T+++ L+ GF
Sbjct: 688 SILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGF 747
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ + + H M RG PS YN +D CK G + +A+RL + M LP L
Sbjct: 748 CQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLL 807
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL-NAAMELMD 341
++ L+ G + + +A+ +F + D A+ +I L++ RDL + EL+D
Sbjct: 808 ESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLK-RDLVDECSELID 866
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKS 365
MEEK + +TY + GL ++
Sbjct: 867 IMEEKGCQPNPLTYSLLIEGLERT 890
>gi|297807667|ref|XP_002871717.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317554|gb|EFH47976.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 533
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 177/426 (41%), Gaps = 36/426 (8%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMR 117
P P L L + N AL+ F + + HP FT D + L L+R R
Sbjct: 36 PTIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRAR 95
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQS-YEETLEAFDRMER--------- 167
FD LM+ ++ ++P + +++ I L R YE ++ F R+
Sbjct: 96 AFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 155
Query: 168 --------------EIFVGIRKFGSEEF---------NVLLQAFCTQKEMKEARSVFVKL 204
++ + K E F N+L++A C + +++ A V ++
Sbjct: 156 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 215
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ PN T +L G+ GD+ + + EM+ RG+ P +TY + +DGYCK G F
Sbjct: 216 PAMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDAITYTVLMDGYCKLGRF 275
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + ++ME+ P+ T +I + +AR +FDEM R+ PD +
Sbjct: 276 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKV 335
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I +L ++ A L +M + DN T+ L K + KL+D +G
Sbjct: 336 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDKGS- 394
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T L+ C + LW + +R P+ ++L+ GL G +E
Sbjct: 395 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVR 454
Query: 444 CSKQML 449
++ML
Sbjct: 455 VLEEML 460
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 125/280 (44%), Gaps = 20/280 (7%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFG 177
D+ W +P +T ++++ K + E D ME+ EI +G
Sbjct: 251 LDRGW---------YPDAITY---TVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG 298
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
V+++A C +K+ EAR++F ++L R F P++ ++ E V +
Sbjct: 299 -----VMIRALCKEKKSGEARNMFDEMLDRSFMPDSSLCCKVIDALCEDHKVDEACGLWR 353
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M+ P + I CK+G +A +LF+E ++ +PSL T TLI G
Sbjct: 354 KMLKNNCMPDNALLSTLIHWLCKEGRVSEARKLFDEFDK-GSIPSLLTYNTLIAGMCEKG 412
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A +L+D+M +R KP+ YN +I L + ++ + +++EM E + T+
Sbjct: 413 ELTEAGRLWDDMFERKCKPNAFTYNVLIEGLSKNGNVKEGVRVLEEMLESGCFPNKTTFL 472
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+F GL K E K+ + V K + L KF
Sbjct: 473 ILFEGLQKLGKEEDAIKIVSMAVMNGKVDKESWELFLNKF 512
>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Glycine max]
Length = 623
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/399 (24%), Positives = 174/399 (43%), Gaps = 7/399 (1%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
+TL+ ++L R + +ALE F + ++ F P + + L + ++ AW L
Sbjct: 145 TTLIFDLLVRAYCELKKPNEALECF-YLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVL 203
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
+ + R + +L + +IM++ + K ++ E ME +G++ +N ++
Sbjct: 204 YAEMFRMNIRS-SLYTFNIMINVLCKEGKLKKAKEFIGHMET---LGVKP-NVVTYNTII 258
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
C + + + AR +F + + P+ T N + G + G + +M+ G
Sbjct: 259 HGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLV 318
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ VTYN IDGYC KG A +EM + SL T IH + + A +
Sbjct: 319 PNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNM 378
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
EM ++ + PD +N +I+ RC D A L+DEM K I VTY ++ + L K
Sbjct: 379 IKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGK 438
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L+ ++ + +P L+ C N +D L + + P
Sbjct: 439 RNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEIT 498
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ G C G+ EEA + +M R + SY L
Sbjct: 499 YNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTL 537
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+ + A + M +A ++ ++ + P+ T NIL+ G+ GD EMV
Sbjct: 359 YNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMV 418
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P++VTY I K+ +A LF ++++ LP + LI G NI
Sbjct: 419 GKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNID 478
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QL EM + PD YN ++ R + A +L+DEM+ + I D+++Y+T+
Sbjct: 479 RAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLI 538
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ ++ D M+ F P T L++ C N + L ++ +G
Sbjct: 539 SGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGIT 598
Query: 420 P 420
P
Sbjct: 599 P 599
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 100/215 (46%), Gaps = 1/215 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L+ +C + K A + +++ + P T L+ + + + + ++
Sbjct: 395 NILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQ 454
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P ++ +N IDG+C G A +L +EM+ + LP T TL+ G + +
Sbjct: 455 EGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEE 514
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
ARQL DEM +R +KPD +YN +IS + D+ A + DEM +TY+ +
Sbjct: 515 ARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQ 574
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
GL K+ E +L M+ P T + +++
Sbjct: 575 GLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIE 609
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 89/191 (46%), Gaps = 1/191 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ + MKEA ++F K+ P+ N L+ G +G++ EM
Sbjct: 429 YTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMD 488
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P +TYN + GYC++G +A +L +EM+R P + TLI G ++
Sbjct: 489 NMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMK 548
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ DEM P I YNA+I L + ++ A EL+ EM K I D+ TY ++
Sbjct: 549 DAFRVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608
Query: 360 FGLMKSSGLEG 370
+ LEG
Sbjct: 609 EAMETVDDLEG 619
>gi|15237345|ref|NP_197146.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170213|sp|Q9FFE3.1|PP388_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16420, mitochondrial; Flags: Precursor
gi|9759124|dbj|BAB09609.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|332004907|gb|AED92290.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 535
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 177/426 (41%), Gaps = 36/426 (8%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMR 117
P P L L + N AL+ F + + HP FT D + L L+R R
Sbjct: 38 PPIKPWPQRLFPKRLVSMITQQQNIDLALQIFLYAGKSHPGFTHNYDTYHSILFKLSRAR 97
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQS-YEETLEAFDRMER--------- 167
FD LM+ ++ ++P + +++ I L R YE ++ F R+
Sbjct: 98 AFDPVESLMADLRNSYPPIKCGENLFIDLLRNYGLAGRYESSMRIFLRIPDFGVKRSVRS 157
Query: 168 --------------EIFVGIRKFGSEEF---------NVLLQAFCTQKEMKEARSVFVKL 204
++ + K E F N+L++A C + +++ A V ++
Sbjct: 158 LNTLLNVLIQNQRFDLVHAMFKNSKESFGITPNIFTCNLLVKALCKKNDIESAYKVLDEI 217
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
S PN T +L G+ GD+ + + EM+ RG+ P TY + +DGYCK G F
Sbjct: 218 PSMGLVPNLVTYTTILGGYVARGDMESAKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRF 277
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + ++ME+ P+ T +I + +AR +FDEM +R+ PD +
Sbjct: 278 SEAATVMDDMEKNEIEPNEVTYGVMIRALCKEKKSGEARNMFDEMLERSFMPDSSLCCKV 337
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I +L ++ A L +M + DN T+ L K + KL+D +G
Sbjct: 338 IDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLCKEGRVTEARKLFDEFEKGS- 396
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T L+ C + LW + +R P+ ++L+ GL G +E
Sbjct: 397 IPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAFTYNVLIEGLSKNGNVKEGVR 456
Query: 444 CSKQML 449
++ML
Sbjct: 457 VLEEML 462
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 119/258 (46%), Gaps = 8/258 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ ++++ K + E D ME+ EI +G V+++A C +K+ EAR+
Sbjct: 263 TYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYG-----VMIRALCKEKKSGEARN 317
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F ++L R F P++ ++ E V + +M+ P + I C
Sbjct: 318 MFDEMLERSFMPDSSLCCKVIDALCEDHKVDEACGLWRKMLKNNCMPDNALLSTLIHWLC 377
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G +A +LF+E E+ +PSL T TLI G + +A +L+D+M +R KP+
Sbjct: 378 KEGRVTEARKLFDEFEK-GSIPSLLTYNTLIAGMCEKGELTEAGRLWDDMYERKCKPNAF 436
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +I L + ++ + +++EM E + T+ +F GL K E K+
Sbjct: 437 TYNVLIEGLSKNGNVKEGVRVLEEMLEIGCFPNKTTFLILFEGLQKLGKEEDAMKIVSMA 496
Query: 379 IEGKFVPKTRTVVMLMKF 396
+ V K + L KF
Sbjct: 497 VMNGKVDKESWELFLKKF 514
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 79/184 (42%), Gaps = 3/184 (1%)
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR--DLNAAMELMDEMEE 345
L+ GL + ++F +P +K + + N +++ LI+ + DL AM + E
Sbjct: 126 LLRNYGLAGRYESSMRIFLRIPDFGVKRSVRSLNTLLNVLIQNQRFDLVHAM-FKNSKES 184
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
I + T + + L K + +E K+ D + VP T ++ + ++
Sbjct: 185 FGITPNIFTCNLLVKALCKKNDIESAYKVLDEIPSMGLVPNLVTYTTILGGYVARGDMES 244
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ ++DRG+ P +L+ G C GR+ EA M + +E +Y ++ R
Sbjct: 245 AKRVLEEMLDRGWYPDATTYTVLMDGYCKLGRFSEAATVMDDMEKNEIEPNEVTYGVMIR 304
Query: 466 YLVQ 469
L +
Sbjct: 305 ALCK 308
>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
Length = 480
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 144/298 (48%), Gaps = 4/298 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ C + EA S ++ APN + NI++ G+ ++ ++ F EM
Sbjct: 67 YNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEE 126
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+ Y+ + +CK G AM +F EM C P + L+ G R IH+
Sbjct: 127 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 186
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+LF M R KPD+ YN MI+ L + + L+ A+ L++ M+++ + VTY T+
Sbjct: 187 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 246
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTR---TVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
L K + L+ +++++M EG P T +V++L+ C R ++ + RG
Sbjct: 247 HLCKFARLQQAYEVFEKMAEGP-CPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRG 305
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
P + L+ GL S + ++A E + ML + + +Y +L L + + E+
Sbjct: 306 ISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEE 363
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 149/306 (48%), Gaps = 4/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++Q+FC + +A VF ++ ++ P+ N+LL G + + + M
Sbjct: 136 YSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMN 195
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P VVTYN I G CK +A+ L E M++ P+ T TTLI +
Sbjct: 196 SRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQ 255
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMI--SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
QA ++F++M + AY+ +I + L + R A E+ EM + I VTY+T
Sbjct: 256 QAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNT 315
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL+ ++ L+ +L M++ P T +L+ C +V+ L + D+G
Sbjct: 316 LLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKG 375
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQML-VRRRQVSEASYRMLQRYLVQANANEKL 476
F P ++L++ L GR ++AFE K+M + +Q+ +S +L L + + +E
Sbjct: 376 FVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAK 435
Query: 477 EDLDRM 482
+ L +M
Sbjct: 436 DFLKQM 441
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 146/387 (37%), Gaps = 53/387 (13%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYE 156
H P ++ + + R ++A + ++ HP T + S ++ K +
Sbjct: 93 HCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPP--TPHAYSSIVQSFCKTGNVS 150
Query: 157 ETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PN 211
+ ++ F M + G E FNVLL +++ EAR +F + SR P+
Sbjct: 151 KAMDVFAEMPAK--------GCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPD 202
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N ++ G + + M P+ VTY ID CK A +FE
Sbjct: 203 VVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFE 262
Query: 272 EMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+M C ++ LI+G R +A+++F EM R + P + YN ++ L+
Sbjct: 263 KMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLS 322
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
L AMEL M ++ + TY + L K+ +E KL M + FVP +
Sbjct: 323 TAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKI 382
Query: 390 VVMLMKFFCVNFRVDLGLNLWG-----------------------------------YLI 414
+L+ R+D L+ +
Sbjct: 383 WEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMT 442
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEA 441
D G P D LV GLC +G+ ++A
Sbjct: 443 DTGIVPDKFTYDKLVVGLCWQGKADQA 469
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/299 (22%), Positives = 131/299 (43%), Gaps = 11/299 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A E F+ ++ P + + L + + D+A L+ +++ S T + +
Sbjct: 186 EARELFR-SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP-TFVTYTT 243
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL--QAFCTQKEMKEARSVFV 202
++ + KF ++ E F++M G ++VL+ C + EA+ +F
Sbjct: 244 LIDHLCKFARLQQAYEVFEKMAE----GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++ R +P T N LL G + + AME+ Y M+ + P++ TY I I CK
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYF-MLDQVPAPNMFTYEILISSLCKT 358
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+A +L M +PSL+ L+ + A +L+ EM + N + +G+
Sbjct: 359 DQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSS 418
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
N ++ ++R ++ A + + +M + I D TY + GL + KL + ++
Sbjct: 419 NILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELV 477
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/344 (23%), Positives = 124/344 (36%), Gaps = 78/344 (22%)
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSV-----------------------------------V 248
E+ V E EM GF P V +
Sbjct: 6 EADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAI 65
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH--------- 299
YN I CK G +A + M + C P++ + +I G RNI
Sbjct: 66 LYNNLISCLCKAGMLAEAESYLKRMPQ-HCAPNVVSYNIIIDGYCKARNIEKALAFLREM 124
Query: 300 --------------------------QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+A +F EMP + +PDI +N ++S L R R +
Sbjct: 125 EELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKI 184
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A EL M + D VTY+TM GL K L+ L +RM + P T L
Sbjct: 185 HEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTL 244
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCP---HGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+ C R+ ++ + + G CP +++ +L+ GLC R EA E ++M
Sbjct: 245 IDHLCKFARLQQAYEVFEKMAE-GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRG 303
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
R + +Y L L+ + KL+D + + +P P
Sbjct: 304 RGISPTVVTYNTLLEGLL---STAKLQDAMELTYFMLDQVPAPN 344
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 90/221 (40%), Gaps = 16/221 (7%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P T P S L+ ++ L A G +A E F+ ++ +PT + L L
Sbjct: 270 PCTEPAYSVLI--LINGLCKARRPG-EAKEMFQ-EMRGRGISPTVVTYNTLLEGLLSTAK 325
Query: 119 FDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
A EL + Q P++ T + I++S + K EE + M + FV K
Sbjct: 326 LQDAMELTYFMLDQVPAPNMFTYE---ILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKI 382
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFKESGDVTAMEMF 234
+ VLL + +A ++ K +SR + NILL G G V + F
Sbjct: 383 ----WEVLLSRLARAGRLDDAFELY-KEMSRINCQQLVGSSNILLDGILRRGSVDEAKDF 437
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+M G P TY+ + G C +G A +L EE+ R
Sbjct: 438 LKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVR 478
>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Cucumis sativus]
Length = 783
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/320 (24%), Positives = 152/320 (47%), Gaps = 4/320 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L A ++ ++EAR + + + S+ +PN T N+L+ G+ G + M
Sbjct: 251 YNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMT 310
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+V TYN+ ++G+C G +A R+ +EME++ LP + T TLI G R+
Sbjct: 311 RNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSS 370
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L +EM K+ +K + YN ++ + + ++ A +D+MEE + D VTY+T+
Sbjct: 371 EVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLI 430
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K+ + ++ D M T T+ ++ CV ++D NL RG+
Sbjct: 431 GAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYI 490
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA-NANEKLED 478
+ +L+ G + + A +M R+ S +Y + L Q+ ++ ++
Sbjct: 491 LDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDK 550
Query: 479 LDRMIKNLQAVLPPPTRQQV 498
L+ M++N ++P T +
Sbjct: 551 LNEMLEN--GLVPDETTYNI 568
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 133/300 (44%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ ++ E S+ ++ + N T NI+L + G++T +M
Sbjct: 356 YNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKME 415
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VTYN I YCK G G A R+ +EM T+ T++H + + +
Sbjct: 416 ENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLD 475
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L KR D +Y +I + + A+ L DEM+E++I +TY+++
Sbjct: 476 EAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVI 535
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL +S ++ + M+E VP T +++ FC+ V+ +I+ F
Sbjct: 536 GGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFK 595
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + ++L+ GLC G E+A + ++ + + + +Y + L + E DL
Sbjct: 596 PDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDL 655
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 123/272 (45%), Gaps = 5/272 (1%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N+L+ FC ++ EA R K+ P+ T N L+ G + D + + E
Sbjct: 321 YNMLVNGFCNDGKIDEAFRIRDEMEKM--NVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M +G + + VTYNI + CKKG +A ++ME P T TLI
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++ DEM + LK D N ++ L + L+ A L+ ++ D V+Y
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K + L+D M E + +P T T ++ C + +VD ++ +++ G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P ++++ G C G E+AF+ +M+
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMI 590
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/240 (22%), Positives = 101/240 (42%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
PN + NIL+ G+ V + ++M G P V+YN +D K+ +A
Sbjct: 210 VPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARD 269
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L +M+ P+ T L+ G + + +A ++ + M + NL P + YN +++
Sbjct: 270 LLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC 329
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
++ A + DEME+ + D VTY+T+ G + V L + M +
Sbjct: 330 NDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAV 389
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +++K+ C + + + G P + L+ C G+ +AF +M
Sbjct: 390 TYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEM 449
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 39/262 (14%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+AF M+ G+ K + N +L C +K++ EA ++ R + + + IL
Sbjct: 441 KAFRMMDEMTSKGL-KIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499
Query: 219 LLGF--KESGDVTAMEMF----------------------------------YHEMVLRG 242
+LG+ E GD A+ ++ +EM+ G
Sbjct: 500 ILGYFKDEKGD-RALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P TYNI I G+C +G A + EM P + T L+ G + +A
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKAL 618
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+LF+ + + D+ YN +ISSL + A +L+ EME K++G D TY + L
Sbjct: 619 KLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAAL 678
Query: 363 MKSSGLEGVCKLYDRMIEGKFV 384
+ ++ + +M+E V
Sbjct: 679 TDAGRIKEAEEFTLKMVESGIV 700
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 119/257 (46%), Gaps = 6/257 (2%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDG---YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+++M +RP+++T N ++ Y A ++ ++ ++ +P+ + LI+
Sbjct: 162 IFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIY 221
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G L + A ++M + PD +YN ++ +L++ R L A +L+ +M+ K +
Sbjct: 222 GYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSP 281
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ TY+ + G + L+ K+ + M +P T ML+ FC + ++D +
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGR-WEEAFECSKQMLVRRRQVSEASYRMLQRYLV- 468
+ P + L+ G CS+ R E + ++M + + + +Y ++ +++
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDG-CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCK 400
Query: 469 QANANEKLEDLDRMIKN 485
+ N E LD+M +N
Sbjct: 401 KGNMTEATTTLDKMEEN 417
>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
lyrata]
Length = 667
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 91/327 (27%), Positives = 144/327 (44%), Gaps = 9/327 (2%)
Query: 173 IRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGD 227
+ K G E FN L+ C + ++ EA + +++ PN T N ++ G +SGD
Sbjct: 126 VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGD 185
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ +M R + V TY+ ID C+ GC A+ LF+EME SL T +
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ G + QL +M R + P++ +N +I ++ L A EL EM K
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + +TY+++ G + L + D M+ P T L+K +C RVD G+
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGM 365
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L+ + RG + +LV G C G+ E A E ++M+ +Y +L L
Sbjct: 366 KLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGL 425
Query: 468 VQANANEK----LEDLDRMIKNLQAVL 490
EK EDL + NL V+
Sbjct: 426 CDNGKLEKALEIFEDLQKSKMNLDIVM 452
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + + + + SR PN T N+L+ F + G + Y EM+
Sbjct: 243 YNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMI 302
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ +TYN +DGYC + +A + + M R C P + T T+LI G V+ +
Sbjct: 303 TKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVD 362
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +LF ++ KR L + Y+ ++ + L A EL EM + D +TY +
Sbjct: 363 EGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILL 422
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + LE ++++ + + K ++++ C +V+ NL+ L +G
Sbjct: 423 DGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVK 482
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ ++++GLC +G EA ++M + ++ +Y L R
Sbjct: 483 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIR 528
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L++ +C K + E +F K+ R N T +IL+ GF +SG + E + EMV
Sbjct: 348 FTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMV 407
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TY I +DG C G A+ +FE++++ + T +I G +
Sbjct: 408 SLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVE 467
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP++ Y MIS L + L+ A L+ +MEE ++ TY+T+
Sbjct: 468 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLI 527
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ L KL + M F ++ M++
Sbjct: 528 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++FN++L FC + E L+ A N T+NI++ F +
Sbjct: 78 TKQFNLVLD-FCKKME-----------LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 125
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
++ G+ P T+N I+G C + +A+ L M C P++ T ++++G +
Sbjct: 126 VMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGD 185
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L +M +RN+K D+ Y+ +I SL R ++AA+ L EME K I VTY++
Sbjct: 186 TSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNS 245
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ +L M K +P T +L+ F ++ L+ +I +G
Sbjct: 246 LVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKG 305
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ + L+ G C + R EA
Sbjct: 306 ISPNTITYNSLMDGYCMQNRLSEA 329
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/221 (22%), Positives = 95/221 (42%), Gaps = 39/221 (17%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
F +M L G ++ T NI I+ +C+ K CF A + ++ ++ P T TLI+G
Sbjct: 87 FCKKMELNGIAHNIYTLNIMINCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLING 144
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + +A L M + +P++ YN++++ + + D + A++L+ +M+E+ + D
Sbjct: 145 LCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKAD 204
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY T+ L C + +D ++L+
Sbjct: 205 VFTYSTIIDSL-----------------------------------CRDGCIDAAISLFK 229
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ +G + LV GLC G+W + + K M R+
Sbjct: 230 EMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRK 270
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 90/224 (40%), Gaps = 3/224 (1%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF+EM R LPSL + G + + +M + +I N MI
Sbjct: 48 DAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLNIMI 107
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RC A ++ ++ + D T++T+ GL S + L RM+E
Sbjct: 108 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQ 167
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C + L L+L + +R ++ LC G + A
Sbjct: 168 PNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISL 227
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
K+M + + S +Y L L +A K D +++K++ +
Sbjct: 228 FKEMETKGIKSSLVTYNSLVGGLCKAG---KWNDGVQLLKDMTS 268
>gi|255547888|ref|XP_002515001.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223546052|gb|EEF47555.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 466
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/434 (24%), Positives = 195/434 (44%), Gaps = 21/434 (4%)
Query: 24 FSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
F + + S+I+ I I D+ + + + + LS LV+ +L R +
Sbjct: 9 FLDSKRQSDIDVIVAKIRVGSSHDEIVQSLVHDEVCNSIHLSHELVDKLLFRF---KDDW 65
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
AL F++ + +P+A++ + I+ +M+ DQ L+ +++ +TLK++
Sbjct: 66 KSALGVFRWAESRAGYKHSPEAYDTMVDIMGKMKQMDQMEFLLEEMEKGQH--VTLKTVG 123
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ R + + +E L FD++ G+ K +E N+LL C +++++ AR +F+
Sbjct: 124 KAMRRFAGARQWENVLRVFDKLGT---FGLEK-NTESMNLLLDTLCKERKVELAREIFLD 179
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L S +PN T NI + G+ + V EM G P V++Y+ + YC + F
Sbjct: 180 LKSHISPNANTFNIFIHGWCKVNRVEEAYWTIQEMKGHGCTPCVISYSTIVQFYCHRSNF 239
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
L +EME +P++ T T+++ +A Q+ M KPD YN++
Sbjct: 240 SKVYELLDEMEAQGLIPNVVTYTSVMSALAKSEEYEEALQIAQRMKSVGCKPDTLFYNSL 299
Query: 324 ISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
I +L + A+++ + EM + + TY++M L S L + IE
Sbjct: 300 IHTLGKAGRPEEAIQVFEVEMPNTGVPPNTSTYNSMIAMLCHHSQERKALNLL-KEIEAS 358
Query: 383 FV--PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD-----LLVTGLCSR 435
+ P +T L+K +D +L L+D H +LD LLV GLC
Sbjct: 359 IICKPDVQTYYPLLKSCFKAGSID---SLLSQLLDDMVKKHHLSLDFSAYTLLVHGLCRA 415
Query: 436 GRWEEAFECSKQML 449
+ E A+ ++M+
Sbjct: 416 NKCEWAYCLFEEMI 429
>gi|255660840|gb|ACU25589.1| pentatricopeptide repeat-containing protein [Pitraea cuneato-ovata]
Length = 418
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 94/341 (27%), Positives = 152/341 (44%), Gaps = 17/341 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E F+ T ++ ++ P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECFRLTRENKYWVPF-DTCRKVLEHLMKLKYFKLVWSFYKEILECRYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F GI K+G FN L+ + ++ E R
Sbjct: 142 LMDRFCK--------EGEIRLAQSVFDGITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+ RG P+ VT+ IDG+CK
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M P T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 254 NGKLDLAMEIYKQMLSQGFSPDXITYNTLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKIT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I D+V+Y + GL K K+ M+
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVSYTALISGLCKEGRSVDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P T T ++M FC N V +G L + G P
Sbjct: 374 SVGLKPDTGTYTIVMHEFCKNGDVKMGSKLLKEMQRDGHVP 414
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 96/404 (23%), Positives = 180/404 (44%), Gaps = 34/404 (8%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH L KS+ I++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLPEAKSLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSRFAPNNK 213
LE +I+V F+ L+ A+ +++A F + + P +
Sbjct: 53 ATILETKGAQRSDIYV---------FSGLITAYLESGFLRDAIECFRLTRENKYWVPFDT 103
Query: 214 TMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+L L+ K V + FY E++ + S+ +NI +D +CK+G A +F+
Sbjct: 104 CRKVLEHLMKLKYFKLVWS---FYKEILECRYPASLYFFNILMDRFCKEGEIRLAQSVFD 160
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ + PS+ + TL++G + ++ + +L M ++PD+ Y+ +I+ L +
Sbjct: 161 GITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKES 220
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A +L DEM ++ + + VT+ T+ G K+ L+ ++Y +M+ F P T
Sbjct: 221 KMDEAHKLFDEMLDRGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQMLSQGFSPDXITYN 280
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ C + +L + +G P L+ G C G E AFE K+M+
Sbjct: 281 TLIYGLCKKGDLXQAKDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKE 340
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
++ + SY L L + + D ++M++ + +V L P T
Sbjct: 341 NIRLDDVSYTALISGLCKEGRS---VDAEKMLREMLSVGLKPDT 381
>gi|297803426|ref|XP_002869597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297315433|gb|EFH45856.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 538
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 97/405 (23%), Positives = 174/405 (42%), Gaps = 23/405 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
L S V+NVL ++ + L + EFF + + + + LH L + R F A
Sbjct: 79 LDSFRVKNVLLKI---QKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAE 135
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD------------RMEREIFV 171
++ V L K +L ++ + T FD R + F+
Sbjct: 136 SILRDVLVNGGVDLPAKVFDALLY---SYRECDSTPRVFDSLFKTFAHLKKFRNATDTFM 192
Query: 172 GIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESG 226
++ +G E N + + Q + A + ++ + +PN T+N+++ G+ SG
Sbjct: 193 QMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKISPNTYTLNMVMSGYCRSG 252
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
+ +M GFR + V+YN I G+C+KG A++L M + P++ T
Sbjct: 253 KLDKGIELLQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFN 312
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
TLIHG + +A ++F EM NL P+ YN +I+ + D A ++M
Sbjct: 313 TLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCN 372
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
I D +TY+T+ GL K + + + + VP + T L+ CV D G
Sbjct: 373 GIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNADRG 432
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +I G P+ ++L++ C ++ A + ++M+ R
Sbjct: 433 FELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRR 477
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 102/205 (49%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC +++EA VF ++ + PN T N L+ G+ + GD FY +MV
Sbjct: 311 FNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMV 370
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + ++TYN I G CK+ A + +E+++ +P+ T + LI G + RN
Sbjct: 371 CNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDKENLVPNSSTFSALIMGQCVRRNAD 430
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +L+ M + P+ +N +IS+ + D + A +++ EM + I D+ T H +
Sbjct: 431 RGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDGAAQVLREMVRRSIPLDSRTVHQVC 490
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
GL + V +L M KF+
Sbjct: 491 NGLNHQGKDQLVKELLQEMEGKKFL 515
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/392 (20%), Positives = 160/392 (40%), Gaps = 16/392 (4%)
Query: 51 HPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
H +L L + S E++L + L A F + TP F+
Sbjct: 118 HAIVLHTLTKNRKFKS--AESILRDVLVNGGVDLPAKVFDALLYSYRECDSTPRVFDSLF 175
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
A ++ F A + + + + L T++S + +S + + L + M R
Sbjct: 176 KTFAHLKKFRNATDTFMQM-KDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKI 234
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILLLGFKES 225
+ N+++ +C ++ + ++LL F + + N L+ G E
Sbjct: 235 SP----NTYTLNMVMSGYCRSGKLDKG----IELLQDMERLGFRATHVSYNTLIAGHCEK 286
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
G +++ + M G +P+VVT+N I G+C+ +A ++F EM+ + P+ T
Sbjct: 287 GLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCRAVKLQEASKVFGEMKALNLPPNTVTY 346
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
TLI+G + A + +++M ++ DI YN +I L + A + + E+++
Sbjct: 347 NTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILTYNTLILGLCKQAKTRKAAQFVKELDK 406
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ + ++ T+ + G + +LY MI P +T +L+ FC N D
Sbjct: 407 ENLVPNSSTFSALIMGQCVRRNADRGFELYKSMIRSGCHPNEQTFNILISAFCKNEDFDG 466
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+ ++ R + + GL +G+
Sbjct: 467 AAQVLREMVRRSIPLDSRTVHQVCNGLNHQGK 498
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 75/364 (20%), Positives = 139/364 (38%), Gaps = 63/364 (17%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK---FQSYEETLE 160
D+F +L + + ++E + + +P+ +L++ +I+L ++K F+S E L
Sbjct: 80 DSFRVKNVLLKIQKDYLLSFEFFNWAKTRNPASHSLETHAIVLHTLTKNRKFKSAESIL- 138
Query: 161 AFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILL 219
R++ V G ++ F+ LL ++ +E VF L FA L
Sbjct: 139 ------RDVLVNGGVDLPAKVFDALLYSY---RECDSTPRVFDSLFKTFAH--------L 181
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
F+ + D + +M GF P+V + N + +G A+R + EM R
Sbjct: 182 KKFRNATDT------FMQMKDYGFLPTVESCNAYMSSLLGQGRVDIALRFYREMRRCKIS 235
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T+ N ++S R L+ +EL
Sbjct: 236 PNTYTL-----------------------------------NMVMSGYCRSGKLDKGIEL 260
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ +ME +V+Y+T+ G + L KL + M + P T L+ FC
Sbjct: 261 LQDMERLGFRATHVSYNTLIAGHCEKGLLSSALKLKNMMGKNGLQPNVVTFNTLIHGFCR 320
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
++ ++G + P+ + L+ G +G E AF + M+ Q +
Sbjct: 321 AVKLQEASKVFGEMKALNLPPNTVTYNTLINGYSQQGDHEMAFRFYEDMVCNGIQRDILT 380
Query: 460 YRML 463
Y L
Sbjct: 381 YNTL 384
>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 545
Score = 124 bits (310), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 152/302 (50%), Gaps = 1/302 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ FC ++K A +F +++S PN T +IL+ GF + G V + M+
Sbjct: 236 YSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMM 295
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + VVTYN +DGYC A LF M + P + + + +I+G ++ +
Sbjct: 296 KKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVD 355
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF+EM + + P++ YN+++ L + + A+EL+DEM ++ + +TY+++
Sbjct: 356 EAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSIL 415
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ K++ ++ L ++ E P T +L+ C R+D ++ L+ +G+
Sbjct: 416 DAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYS 475
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + L+ G C++G ++E +M + +Y +L L + + N+K E L
Sbjct: 476 PNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKL 535
Query: 480 DR 481
R
Sbjct: 536 LR 537
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 157/307 (51%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ + C K + +A ++ +++S R +P+ T + L+ GF G + ++ M+
Sbjct: 201 YSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMI 260
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+V T++I IDG+CK+G +A + M + + T +L+ G LV+ ++
Sbjct: 261 SDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVN 320
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ LF+ M +R + PD+ +Y+ MI+ + + ++ AM+L +EM K+I + VTY+++
Sbjct: 321 KAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLV 380
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS +L D M + T ++ C N VD + L + ++G
Sbjct: 381 DGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQ 440
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLED 478
P +L+ GLC GR ++A + + +LV+ + +Y ++ + + +E L
Sbjct: 441 PDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAM 500
Query: 479 LDRMIKN 485
L +M N
Sbjct: 501 LSKMKDN 507
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 160/334 (47%), Gaps = 10/334 (2%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
FD E++S +R P ++T S+ IS F + A D R I I
Sbjct: 218 FDLYCEMVS--KRISPDVVTYSSL------ISGFCVVGKLKYAVDLFNRMISDNINP-NV 268
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHE 237
F++L+ FC + +++EA++V ++ + + T N L+ G+ V + ++
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M RG P V +Y+I I+G+CK +AM+LFEEM P++ T +L+ G
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A +L DEM R +I YN+++ ++ + ++ A+ L+ +++EK I D TY
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K L+ K+++ ++ + P T L+ FC D GL + + D G
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ ++L+ L + ++A + ++M+ R
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKLLREMIAR 542
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/370 (23%), Positives = 155/370 (41%), Gaps = 46/370 (12%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF---NVLLQAFCTQKEMKEARSVF 201
+L + K + Y+ L +ME F GI+ +F N+L+ F +K + SVF
Sbjct: 64 ILGSLLKAKQYQTALSLSQQME---FNGIK----PDFITCNLLMNCFSQLGHIKFSFSVF 116
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF----------------- 243
K+L + + P+ T IL+ G G+V F+ ++V +GF
Sbjct: 117 AKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRV 176
Query: 244 ------------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
RP+VV Y+ ID CK DA L+ EM P + T
Sbjct: 177 GETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTY 236
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
++LI G +V + A LF+ M N+ P++ ++ +I + + A ++ M +
Sbjct: 237 SSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMK 296
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K + D VTY+++ G + L++ M + P + +++ FC VD
Sbjct: 297 KNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDE 356
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ L+ + + P+ + LV GLC GR A E +M R + + +Y +
Sbjct: 357 AMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILD 416
Query: 466 YLVQANANEK 475
+ + N +K
Sbjct: 417 AICKNNHVDK 426
>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 719
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/349 (24%), Positives = 156/349 (44%), Gaps = 6/349 (1%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
+Q P + + + ++A+ELM H + + + + +++ + K
Sbjct: 251 VQEKGVYPDIVTYNTLISAYSSQGLMEEAFELM-HAMPSKGFSPGVYTYNTVINGLCKHG 309
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
YE E F M R G+ S + LL C + + E ++F + SR P+
Sbjct: 310 KYERAKEVFAEMLRS---GLSP-DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDL 365
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ ++ F SG++ M+++ + G P V Y I I GYC+KG +AM L E
Sbjct: 366 VCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNE 425
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M + C + T T++HG + + +A +LF+EM +R L PD +I + +
Sbjct: 426 MLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGN 485
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L AMEL +M+EKRI D VTY+T+ G K ++ +++ M+ + +P + +
Sbjct: 486 LQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSI 545
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ C + +W +I + P + ++ G C G +
Sbjct: 546 LVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDG 594
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 5/275 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+N +L C +K + EA +F ++ R P++ T+ IL+ G + G++ AME+F +M
Sbjct: 438 YNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELF-KKM 496
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ + VVTYN +DG+ K G A ++ +M LP+ + + L++ ++
Sbjct: 497 KEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHL 556
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +++DEM +++KP + N+MI R + + +++M + D ++Y+T+
Sbjct: 557 SEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTL 616
Query: 359 FFGLMKSSGLEGVCKLYDRMIE--GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+G +K + L +M E G VP T ++ FC ++ + +I+R
Sbjct: 617 IYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIER 676
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
G P L+ G S+ EAF +ML R
Sbjct: 677 GVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQR 711
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 151/349 (43%), Gaps = 11/349 (3%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
LF N KAL +F +++ P + + R +A L + + +
Sbjct: 374 LFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQ-QGC 431
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ + + + +L + K + E + F+ M ER +F S +L+ C +
Sbjct: 432 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD-----SYTLTILIDGHCKLGNL 486
Query: 195 KEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ A +F K+ R + T N LL GF + GD+ + + +MV + P+ ++++I
Sbjct: 487 QNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSIL 546
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
++ C KG +A R+++EM + P++ ++I G N ++M
Sbjct: 547 VNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGF 606
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG--HDNVTYHTMFFGLMKSSGLEGV 371
PD +YN +I ++ +++ A L+ +MEEK+ G D TY+++ G + + ++
Sbjct: 607 VPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEA 666
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +MIE P T L+ F + ++ RGF P
Sbjct: 667 EAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSP 715
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 101/462 (21%), Positives = 179/462 (38%), Gaps = 65/462 (14%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILAR 115
HL + PL+ V VL R S G + ++ F P+F T + +HIL R
Sbjct: 61 NHLIRLNPLA---VVEVLYRCRNDLSLGQRFVDQLGFNF--PNFKHTSLSLSAMIHILVR 115
Query: 116 M-RYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD---------RM 165
R D ++ ++R+ S + I+ S +S + + FD R
Sbjct: 116 SGRLSDAQSCVLRMIRRSGVS-----RVEIVNSLVSTYSNCGSNDSVFDLLIRTFVQARK 170
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF---------APNNKTMN 216
RE + S+ + V + A C R +V+L R N T+N
Sbjct: 171 LREAYEAFTLLRSKGYTVSIDA-CNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLN 229
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
I++ + G + + F E+ +G P +VTYN I Y +G +A L M
Sbjct: 230 IMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSK 289
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T T+I+G +A+++F EM + L PD Y +++ + D
Sbjct: 290 GFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVET 349
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ +M + + D V + +M +S L+ ++ + E +P +L++
Sbjct: 350 ENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQG 409
Query: 397 FC--------VNFRVDL-----------------GL----------NLWGYLIDRGFCPH 421
+C +N R ++ GL L+ + +RG P
Sbjct: 410 YCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPD 469
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L +L+ G C G + A E K+M +R ++ +Y L
Sbjct: 470 SYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTL 511
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 90/175 (51%), Gaps = 3/175 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++L+ A C++ + EA V+ +++S+ P N ++ G+ SG+ + E+F +M+
Sbjct: 543 FSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMI 602
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME--RVACLPSLQTITTLIHGAGLVRN 297
GF P ++YN I G+ K+ A L ++ME + +P + T +++HG
Sbjct: 603 SEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQ 662
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A + +M +R + PD Y ++I+ + +L A DEM ++ D+
Sbjct: 663 MKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGFSPDD 717
>gi|2827705|emb|CAA16678.1| predicted protein [Arabidopsis thaliana]
Length = 598
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/425 (22%), Positives = 181/425 (42%), Gaps = 35/425 (8%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
+S++E+ RI+ L L + + P L+E VL R A + G + F
Sbjct: 73 ASDVEKSYRILRKFHSRVPKLELALNESGVELRP---GLIERVLNRCGDAGNLGYR---F 126
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
F + + P + + + ++ + IL++MR F W L+ +++ +P L+ + +++ R
Sbjct: 127 FVWAAKQPRYCHSIEVYKSMVKILSKMRQFGAVWGLIEEMRKENPQLIEPELFVVLVQRF 186
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLL 205
+ ++ +E D M KFG E F LL A C +K+A +F +
Sbjct: 187 ASADMVKKAIEVLDEMP--------KFGFEPDEYVFGCLLDALCKHGSVKDAAKLFEDMR 238
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
R + +L+ +M GF P +V Y + GY G D
Sbjct: 239 MRVGKMMEAKYVLV-----------------QMNEAGFEPDIVDYTNLLSGYANAGKMAD 281
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L +M R P+ T LI V + +A ++F EM + + D+ Y A++S
Sbjct: 282 AYDLLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVS 341
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ ++ ++D+M +K + +TY + K E +L ++M + ++ P
Sbjct: 342 GFCKWGKIDKCYIVLDDMIKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHP 401
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
++++ C V + LW + + G P +++ GL S+G EA +
Sbjct: 402 DIGIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEASDHF 461
Query: 446 KQMLV 450
K+ML+
Sbjct: 462 KEMLL 466
>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 915
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/342 (24%), Positives = 164/342 (47%), Gaps = 14/342 (4%)
Query: 156 EETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+E ++ F +M + + + +R + VL++A C + EA ++ ++ + PN
Sbjct: 305 DEAMDLFVKMKDDDCYPTVRTY-----TVLIKALCGSERKSEALNLVKEMEEKGIKPNIH 359
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T +L+ + +M+ +G P+V+TYN I+GYCK+G DA+ + E M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E P+ +T LI G RN+H+A + ++M +R + PD+ YN++I R +
Sbjct: 420 ESRNLRPNTRTYNELIKGY-CKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
++A L+ M ++ + D TY +M L KS +E C L+D + + +P L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +C +V+ + ++ + P+ + L+ GLC+ G+ +EA ++M+
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
Q + ++ +L L++ D D + Q +L T+
Sbjct: 599 QPTVSTDTILIHRLLKDG------DFDHAYRRFQQMLSSGTK 634
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 95/419 (22%), Positives = 181/419 (43%), Gaps = 24/419 (5%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P+ P+L +P +P + + LF+ + AL F + Q+P + + +
Sbjct: 73 PNWHKCPSLKSMVPAISP-------SHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYS 125
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ L +L Y +++ + ++ S+ + + +++K +S+E +
Sbjct: 126 YASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLFVLDLCRKMNKDESFE--------L 177
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKE 224
+ ++ +G +N LL + + E + V++++L + PN T N ++ G+ +
Sbjct: 178 KYKLIIGC-------YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCK 230
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G+V + +V G P TY I GYC++ A ++F+EM C +
Sbjct: 231 VGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVA 290
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T LIHG + R I +A LF +M + P + Y +I +L + A+ L+ EME
Sbjct: 291 YTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEME 350
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
EK I + TY + L LE +L +M+E +P T L+ +C ++
Sbjct: 351 EKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIE 410
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L++ + R P+ + L+ G C R +A +ML R+ +Y L
Sbjct: 411 DALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSL 468
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 123/262 (46%), Gaps = 2/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + +++A V + SR PN +T N L+ G+ + AM + ++M+
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMGVL-NKML 454
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P VVTYN IDG C+ G F A RL M +P T T++I + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVE 514
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LFD + ++++ P++ Y A+I + +N A ++++M K +++T++ +
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL L+ L ++M++ P T +L+ + D + ++ G
Sbjct: 575 HGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTK 634
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P H + C GR ++A
Sbjct: 635 PDAHTYTTFIQTYCREGRLQDA 656
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/280 (22%), Positives = 115/280 (41%), Gaps = 19/280 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ + C K ++EA +F L + PN L+ G+ ++G V + +M+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKML 559
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ +T+N I G C G +A L E+M ++ P++ T T LIH +
Sbjct: 560 SKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFD 619
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + F +M KPD Y I + R L A +++ +M+E + D TY ++
Sbjct: 620 HAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLI 679
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF---------------CV---NF 401
G + RM + P T + L+K CV
Sbjct: 680 KGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKGGEPGVCVMSNMM 739
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
D+ + L +++ G P+ + + L+ G+C G A
Sbjct: 740 EFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVA 779
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 79/381 (20%), Positives = 145/381 (38%), Gaps = 56/381 (14%)
Query: 114 ARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
R FD A+ L+S + P T SM + + K + EE + FD +E++ +
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDPWTYTSM---IDSLCKSKRVEEACDLFDSLEQKDVI 529
Query: 172 -----------GIRKFG--------------------SEEFNVLLQAFCTQKEMKEARSV 200
G K G S FN L+ CT ++KEA +
Sbjct: 530 PNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLL 589
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
K++ P T IL+ + GD + +M+ G +P TY I YC+
Sbjct: 590 EEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCR 649
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G DA + +M+ P L T ++LI G G + + A + M +P
Sbjct: 650 EGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHT 709
Query: 320 YNAMISSLIRCR------------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ ++I L+ + + + +EL+++M E + + +Y + G
Sbjct: 710 FLSLIKHLLEMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLG 769
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ + L K++D M + + + + V L+ C + + + +I G P
Sbjct: 770 ICEIGNLRVAEKVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLP 829
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ +L+ L +G E
Sbjct: 830 QLESCKILICRLYKKGEKERG 850
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 77/186 (41%), Gaps = 5/186 (2%)
Query: 107 EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
E + +++ M FD EL+ + H KS ++ I + + + FD M+
Sbjct: 729 EPGVCVMSNMMEFDIVVELLEKMVE-HGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKES 225
++ + + FN LL C ++ EA V ++ P ++ IL+ +
Sbjct: 788 QKEGISPSEL---VFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKK 844
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
G+ + ++ G+ + + I IDG K+G LF ME+ C S QT
Sbjct: 845 GEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTY 904
Query: 286 TTLIHG 291
+ LI G
Sbjct: 905 SLLIEG 910
>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
Length = 702
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/410 (24%), Positives = 164/410 (40%), Gaps = 57/410 (13%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQA---WELMSHVQR 131
A H AL+ + P++ DA + L R F++A WE +
Sbjct: 203 LAKHDQLDNALDLLD---EMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
P+L T K +ML + K ++E E + RM + + + +L+ C
Sbjct: 260 ASPNLATYK---VMLDGLCKLGRFKEAGEVWSRM----MANNHQADTVTYGILIHGLCRS 312
Query: 192 KEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ A V+ ++ + + N L+ GF E G F+ G R + TY
Sbjct: 313 GDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIR-QITTY 371
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVA-CLPSLQTITTLIHGAGLVRN------------ 297
NI G G +A L +++E A C P T TLIHG L N
Sbjct: 372 NIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHG--LCENGYANRAFEILED 429
Query: 298 -------------------------IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
H A +++ M K KP+ YNA+I+ R
Sbjct: 430 ARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSK 489
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+N A+++ EM +TY+T+ GL K+ + L M+E F P RT
Sbjct: 490 INDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYAS 549
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L++ C + +VD+ L +W ++D G ++L+ GLCS G+ +EAF
Sbjct: 550 LIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 162/397 (40%), Gaps = 43/397 (10%)
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
+H L R D A + S + + L +S+ S I F T EA+ +
Sbjct: 306 IHGLCRSGDVDSAARVYSDMVKAGLVL----DVSVYNSLIKGFCEVGRTGEAWKFWDSTG 361
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGD 227
F GIR+ + +N++ + + EA + +L + +P+ T L+ G E+G
Sbjct: 362 FSGIRQITT--YNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGLCENGY 419
Query: 228 VT-AMEMF----------------------------------YHEMVLRGFRPSVVTYNI 252
A E+ Y MV G +P+ YN
Sbjct: 420 ANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNA 479
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+G+C+ DA++++ EM C P++ T TLI G +A L EM +R
Sbjct: 480 LINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERG 539
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
KPDI Y ++I L R + ++ A+ + DE+ + + D + ++ + GL + ++
Sbjct: 540 FKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAF 599
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+Y M E P T LM F +D +LW ++D G P + + GL
Sbjct: 600 CIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGL 659
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
CS R E ++L + ++ +L R +++
Sbjct: 660 CSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIK 696
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/274 (24%), Positives = 118/274 (43%), Gaps = 5/274 (1%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGF 222
EI R G E ++ ++ FC +A V+ ++ PN+ N L+ GF
Sbjct: 425 EILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGF 484
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ Y EM G P+++TYN IDG CK + +A L +EM P +
Sbjct: 485 CRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDI 544
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+T +LI G + + A +++DE+ L+ D+ +N +I L ++ A + E
Sbjct: 545 RTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLE 604
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M+EK + VTY+T+ G + ++ L+ +++ P T +K C R
Sbjct: 605 MKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNR 664
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
G+ L ++ G P +LV + G
Sbjct: 665 TPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 135/325 (41%), Gaps = 10/325 (3%)
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAME 232
+F V+L AF A + F L S P ++ N LL F + + +
Sbjct: 80 RFSESAALVVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDAD 139
Query: 233 MFY----HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
F+ H R P++ TYNI + C +G A+ LF + R P T +TL
Sbjct: 140 AFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTL 199
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G + A L DEMP ++ D YNA++S R AM++ +++
Sbjct: 200 MSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPG 259
Query: 349 GHDNV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
N+ TY M GL K + +++ RM+ T T +L+ C + VD
Sbjct: 260 ASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAA 319
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE-CSKQMLVRRRQVSEASYRMLQRY 466
++ ++ G + L+ G C GR EA++ RQ++ +Y ++ +
Sbjct: 320 RVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQIT--TYNIMTKG 377
Query: 467 LVQANANEKLEDLDRMIKNLQAVLP 491
L+ + + +L + ++N + P
Sbjct: 378 LLDSGMVSEATELLKQLENDASCSP 402
>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 191/425 (44%), Gaps = 13/425 (3%)
Query: 64 LSSTLVE-NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
L TLV N L + + + A++ F ++ H P + ++ L +M A
Sbjct: 6 LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMGNTTMA 64
Query: 123 WELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+L+ ++ P+++ ++ + + K + E ++ F M +E GI
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTI---IDSLCKDRLVTEAMDFFSEMVKE---GIPP-DVFT 117
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ +L FC + EA S+F +++ R PN T IL+ G + ++ + + M
Sbjct: 118 YSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMT 177
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V TYN +DGYC + +A +LF M+R C P++++ LI+G I
Sbjct: 178 EKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRID 237
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L EM ++L PDI Y+ ++ + A EL+ EM + + +TY +
Sbjct: 238 EAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVL 297
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +L M E K P +L++ C +++ L+ L +G
Sbjct: 298 DGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQ 357
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P ++++GL G EA E ++M V + +Y ++Q +L + +
Sbjct: 358 PTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRL 417
Query: 479 LDRMI 483
++ M+
Sbjct: 418 IEEMV 422
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +P++VT+N + G C K DA++LF+EM ++ P + T +T+I+G + N A
Sbjct: 5 GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
QL +M ++ KP++ AYN +I SL + R + AM+ EM ++ I D TY ++ G
Sbjct: 65 LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ L+ +M+E +P T +L+ C + ++ + ++G P
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184
Query: 422 GHALDLLVTGLCSRGRWEEA 441
+ + LV G CSR + +EA
Sbjct: 185 VYTYNALVDGYCSRSQMDEA 204
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/376 (23%), Positives = 168/376 (44%), Gaps = 14/376 (3%)
Query: 112 ILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
I+ ++ FD+ + M H P ++T S +++ + K + L+ +ME +
Sbjct: 26 IMDAVKLFDEMVK-MGH----EPDVITY---STIINGLCKMGNTTMALQLLKKMEEK--- 74
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTA 230
G + +N ++ + C + + EA F +++ P+ T + +L GF G V
Sbjct: 75 GCKP-NVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNE 133
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ +MV R P+ VT+ I IDG CKK +A +FE M P + T L+
Sbjct: 134 ATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVD 193
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + +A++LF+ M ++ P++ +YN +I+ + ++ A L+ EM K +
Sbjct: 194 GYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTP 253
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D TY T+ G + + +L M +P T +++ C + +D L
Sbjct: 254 DIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELL 313
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ + P+ +L+ G+C+ G+ E A E + V+ Q + +Y ++ L++
Sbjct: 314 KAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKG 373
Query: 471 N-ANEKLEDLDRMIKN 485
+NE E M N
Sbjct: 374 GLSNEACELFREMAVN 389
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/353 (23%), Positives = 157/353 (44%), Gaps = 23/353 (6%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
+A++FF ++ P + LH + ++A L + + P+ +T
Sbjct: 98 EAMDFFSEMVKE-GIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTF--- 153
Query: 143 SIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+I++ + K + E F+ M E +++ +N L+ +C++ +M EA
Sbjct: 154 TILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT---------YNALVDGYCSRSQMDEA 204
Query: 198 RSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
+ +F ++ R APN ++ NIL+ G +SG + + EM + P + TY+ +
Sbjct: 205 QKLF-NIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMR 263
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
G+C+ G +A L +EM LP+L T + ++ G ++ +A +L M + ++P
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEP 323
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+I Y +I + L AA EL + K I VTY M GL+K C+L+
Sbjct: 324 NIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELF 383
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
M +P + T ++++ F N + L ++ +GF +L
Sbjct: 384 REMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 83/170 (48%)
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M ++ P+L T TL+ G I A +LFDEM K +PD+ Y+ +I+ L + +
Sbjct: 1 MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
A++L+ +MEEK + V Y+T+ L K + + M++ P T
Sbjct: 61 TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
++ FC RV+ +L+ +++R P+ +L+ GLC + EA+
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAW 170
>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F ++ FC++ ++ AR +F ++ R A + T L+ G +G++ + EMV
Sbjct: 360 FTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMV 419
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G VVTY + IDGYCK+G +A R+ EM P++ T T L G ++
Sbjct: 420 DKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVR 479
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM + L+ ++ YN++I+ L + +L AM +M EME D TY T+
Sbjct: 480 AANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLI 539
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L KS + + M++ P T +LM FC++ RV+ G L +++++
Sbjct: 540 DTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVR 599
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ + L+ C + E K M + +E +Y +L
Sbjct: 600 PNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNIL 643
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 136/286 (47%), Gaps = 1/286 (0%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ C E+KEA V +++ + + T +L+ G+ + G++ ++EMV R
Sbjct: 397 ALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGR 456
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P+VVTY DG CK+G A L EM ++ T +LI+G N+ QA
Sbjct: 457 RVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQA 516
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++ EM + D+ Y +I +L + + + A ++ EM +K I TY+ + G
Sbjct: 517 MRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNG 576
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
S +EG KL + M+E P T LMK +C++ + ++ + + P+
Sbjct: 577 FCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPN 636
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ ++L+ G C +EA ++M+ + +++ +SY L R L
Sbjct: 637 ENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLL 682
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 1/284 (0%)
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L+ DR+ +E+ + VL+ +C + M EA V +++ R APN T
Sbjct: 408 LKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L G + GDV A HEM +G +V TYN I+G CK G AMR+ EME
Sbjct: 468 LSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAG 527
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T TTLI +A + EM + +KP I YN +++ +
Sbjct: 528 HRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGK 587
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L++ M EK + + VTY+++ ++ ++Y M + P T +L+K
Sbjct: 588 KLLEWMLEKNVRPNVVTYNSLMKQYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGH 647
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C + L +I++G + L+ L + ++ EA
Sbjct: 648 CKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEA 691
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 135/318 (42%), Gaps = 8/318 (2%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N+LL+A + +K+A F ++ S P+ T ++ G+ G++ EM +
Sbjct: 259 NILLKALLSAGRLKDACQHFDEMSS--PPDVVTYGTMVHGYCVRGELENAVKLLDEMAAK 316
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G + Y I C KG DA+R+ E+M TT+I G ++ A
Sbjct: 317 GLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAA 376
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
R+LF+EM KR L D + A+I+ L R +L A ++ EM +K + D VTY + G
Sbjct: 377 RRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDG 436
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K + ++++ M+ + P T L C V L + ++G +
Sbjct: 437 YCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELN 496
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ + L+ GLC G E+A +M + +Y L L ++ + DR
Sbjct: 497 VYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSG------EFDR 550
Query: 482 MIKNLQAVLPPPTRQQVA 499
LQ +L + +A
Sbjct: 551 AHNMLQEMLDKGIKPSIA 568
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/249 (22%), Positives = 103/249 (41%), Gaps = 5/249 (2%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
L + + + +++ + KF + E+ + ME + + L+ C E
Sbjct: 495 LNVYTYNSLINGLCKFGNLEQAMRIMTEME----AAGHRTDVYTYTTLIDTLCKSGEFDR 550
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A ++ ++L + P+ T N+L+ GF SG V + M+ + RP+VVTYN +
Sbjct: 551 AHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMK 610
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
YC +++ M P+ T LI G RN+ +A EM ++ L+
Sbjct: 611 QYCIDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRL 670
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+Y+A+I L + + + A D+M + + + Y LE L
Sbjct: 671 TASSYSALIRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLC 730
Query: 376 DRMIEGKFV 384
D ++E V
Sbjct: 731 DELVEASHV 739
>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
Length = 613
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 134/290 (46%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+L+ C + + SV K+ P+ T N L+ G G + ++EMV
Sbjct: 131 LNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMV 190
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+V++Y I+G CK G A+ +F++ME+ C P++ T +T+I R ++
Sbjct: 191 KRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVN 250
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + EM +R + P++ YN+++ LN A L EM + + + VT+ +
Sbjct: 251 DAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILV 310
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +++ M E P T LM +C+ ++ ++ +I +G
Sbjct: 311 DGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCA 370
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P H+ ++L+ G C R +EA +M + +Y L + L Q
Sbjct: 371 PGAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQ 420
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/388 (24%), Positives = 184/388 (47%), Gaps = 12/388 (3%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSH-VQRTH-PSLLTLKSMSIMLSRISKFQSYEET 158
PDA F ++ L +A EL + V+R H P+++ S + +++ + K +
Sbjct: 161 PDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVI---SYTTVINGLCKTGNTSMA 217
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
++ F +ME+ G + ++ ++ + C + + +A +++ R PN T N
Sbjct: 218 VDVFKKMEQN---GCKP-NVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNS 273
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ GF G + + EMV R P+ VT+ I +DG CK+G +A +FE M
Sbjct: 274 IVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKG 333
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T L+ G L R +++A+++F+ M ++ P +YN +I+ + R ++ A
Sbjct: 334 VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAK 393
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ EM K + D VTY T+ GL + + L+ M P T V+L+ F
Sbjct: 394 SLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGF 453
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C + +D L L + ++ P+ +L+ G+ G+ E A E ++ +
Sbjct: 454 CKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDI 513
Query: 458 ASYRMLQRYLVQANANEKLEDLDRMIKN 485
+Y ++ + L++ +++ DL R +++
Sbjct: 514 RTYTVMIKGLLKEGLSDEAYDLFRKMED 541
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 170/381 (44%), Gaps = 11/381 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-VQR-THPSLLTLKSMS 143
A++ FK ++ P + + L + R + A E +S V+R P++ T S+
Sbjct: 217 AVDVFK-KMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI- 274
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ F + + EA R+ +E+ + F +L+ C + + EAR VF
Sbjct: 275 -----VHGFCNLGQLNEA-TRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFET 328
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + P+ T N L+ G+ + + + M+ +G P +YNI I+GYCK
Sbjct: 329 MTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRR 388
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A L EM A P T +TL+ G + +A LF EM P++ Y
Sbjct: 389 MDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVI 448
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ + L+ A++L+ M+EK++ + V Y + G+ + LE +L+ ++
Sbjct: 449 LLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDG 508
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P RT +++K D +L+ + D GF P+ + ++++ G A
Sbjct: 509 TRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAI 568
Query: 443 ECSKQMLVRRRQVSEASYRML 463
+M+ +R V+ ++++ML
Sbjct: 569 RLIDEMVGKRFSVNLSTFQML 589
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/219 (26%), Positives = 109/219 (49%), Gaps = 1/219 (0%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFY 235
G+ +N+L+ +C + M EA+S+ ++ + P+ T + L+ G + G +
Sbjct: 372 GAHSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLF 431
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM G P++VTY I +DG+CK G +A++L + M+ P++ T LI G +
Sbjct: 432 KEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIA 491
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A++LF ++ +PDI Y MI L++ + A +L +ME+ ++ +Y
Sbjct: 492 GKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSY 551
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ M G +++ +L D M+ +F T ML+
Sbjct: 552 NVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 129/307 (42%), Gaps = 37/307 (12%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
EF L +F +K+ S+ ++ L R N ++NIL+ V +M
Sbjct: 95 EFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKM 154
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P +T+N I+G C +G +A+ LF EM + P++ + TT+I+G N
Sbjct: 155 FKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNT 214
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +F +M + KP++ Y+ +I SL + R +N AME + EM E+ I + TY+++
Sbjct: 215 SMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSI 274
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G L +L+ M+ +P T T
Sbjct: 275 VHGFCNLGQLNEATRLFKEMVGRDVMPNTVT----------------------------- 305
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
+LV GLC G EA + M + + ++Y ++ Y +Q NE +
Sbjct: 306 ------FTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKK 359
Query: 478 DLDRMIK 484
+ MI+
Sbjct: 360 VFEIMIR 366
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/229 (21%), Positives = 106/229 (46%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ MV RPSVV + + + KK + + L +M+ ++ ++ LI+
Sbjct: 81 FYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCR 140
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ ++ + + +M K + PD +NA+I+ L + A+EL +EM ++ + ++
Sbjct: 141 LNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVIS 200
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y T+ GL K+ ++ +M + P T ++ C + V+ + ++
Sbjct: 201 YTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMV 260
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+RG P+ + +V G C+ G+ EA K+M+ R + ++ +L
Sbjct: 261 ERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTIL 309
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 35/196 (17%), Positives = 83/196 (42%), Gaps = 4/196 (2%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A F M + N +P + + + S + + + + L ++M+ R+ H+ + +
Sbjct: 74 VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L + + ++ + +M + P T L+ C ++ + L+ ++ RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKL 476
P+ + ++ GLC G A + K+M + + +Y + L + N+ +
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253
Query: 477 EDLDRMIKNLQAVLPP 492
E L M+ + +PP
Sbjct: 254 EFLSEMV---ERGIPP 266
>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
Length = 621
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 158/345 (45%), Gaps = 38/345 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C EM+ A VF + +R +PN +T L+ G +SG V + + MV
Sbjct: 215 YNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRMV 274
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-------------- 285
G P+VVTY I G C +G A RL ME +P+ T
Sbjct: 275 EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKVE 334
Query: 286 ---------------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
T+LI G I A +L +M PD +Y+++I
Sbjct: 335 EAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSLI 394
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L R + L+ A ++++M EK I VTY + L++ G EG K++D+MI
Sbjct: 395 DGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGPKKIFDKMIATGIN 454
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T + ++ +C R++ ++ ++DRG P+ + L+ G + G +AF
Sbjct: 455 PDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFST 514
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM--IKNLQ 487
+ M+ + + +E SY +L R +V+ ++++ D+ ++ +K+LQ
Sbjct: 515 FEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWKIADMKDLQ 559
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/307 (23%), Positives = 131/307 (42%), Gaps = 4/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C ++ A+ LL + AP++ +LG+ +G +T + M
Sbjct: 75 YTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMP 134
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LRG + TY + G G +AM +F M +C P T++HG
Sbjct: 135 LRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTE 194
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +E +P+I YNA+I ++ A+++ + M+ R + TY +
Sbjct: 195 EAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELI 254
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS +E L+ RM+E P T L++ C + L + G
Sbjct: 255 HGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLV 314
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +L+ LC R + EEA ++ + +V+E Y L L + K++
Sbjct: 315 PNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG---KIDAA 371
Query: 480 DRMIKNL 486
D +++ +
Sbjct: 372 DELMQKM 378
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/256 (21%), Positives = 116/256 (45%), Gaps = 19/256 (7%)
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L + K + +E ++ +M E FV + ++ L+ C QK++ +A + ++
Sbjct: 362 LCKTGKIDAADELMQ---KMISEGFVP----DAHSYSSLIDGLCRQKKLSQATLMLEDMM 414
Query: 206 SR---FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ +P T+ I L +E G ++F +M+ G P +VTY + + YC++G
Sbjct: 415 EKGIQASPVTYTIIIDEL-VREVGSEGPKKIF-DKMIATGINPDIVTYTVFVRSYCEEGR 472
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA + +M P+L T TLI G + + QA F+ M + KP+ +Y
Sbjct: 473 MEDAESMIVQMVDRGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTV 532
Query: 323 MISSLIRCRDLNAAMEL-----MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
++ +++ + ++++ M +++E +D + + + +GL++ + L
Sbjct: 533 LLRLVVKKSSSDNSVDIWKIADMKDLQESN--YDEIVWKILIYGLLQKGSVAEFSSLLSV 590
Query: 378 MIEGKFVPKTRTVVML 393
M E + P M+
Sbjct: 591 MKEHGYQPSNTINAMI 606
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/297 (22%), Positives = 110/297 (37%), Gaps = 48/297 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL A + + S+ ++ +R N +T L+ + +GD+ A + ++
Sbjct: 44 LNTLLMALARHRMFPDMESLASRMPAR---NLRTYTTLINAYCLAGDIPAAKQHLTSLLH 100
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRN 297
G P Y + GYC+ G A R+F M CL + T T L+HG AG+VR
Sbjct: 101 AGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVR- 159
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+A +F M + PD Y M+ L A L++E + V Y+
Sbjct: 160 --EAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNA 217
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G + +E K+++ M + P RT L
Sbjct: 218 LIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTEL------------------------ 253
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+ GLC G+ E A +M+ + + +Y L+Q NE
Sbjct: 254 -----------IHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTA----LIQGQCNE 295
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 85/211 (40%), Gaps = 3/211 (1%)
Query: 268 RLFEEMERVAC-LPS--LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
R+F +ME +A +P+ L+T TTLI+ L +I A+Q + L PD AY + +
Sbjct: 55 RMFPDMESLASRMPARNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFV 114
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
R L A + M + TY + GL+ + + ++ M
Sbjct: 115 LGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCA 174
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C R + L + GF P+ + L+ G C+ G E A +
Sbjct: 175 PDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKV 234
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ M R + +Y L L ++ E+
Sbjct: 235 FEGMDGNRCSPNVRTYTELIHGLCKSGKVER 265
Score = 38.1 bits (87), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 4/161 (2%)
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
A LP L+ + TL+ R L MP RNL+ Y +I++ D+ AA
Sbjct: 36 APLPPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAA 91
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ + + + D+ Y + G ++ L C+++ M + T L+
Sbjct: 92 KQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG 151
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
V + ++ + P H +V GLC GR
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGR 192
>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 654
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 152/341 (44%), Gaps = 16/341 (4%)
Query: 103 PDAFEKTLHIL-----ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P+ + T++IL +M ++ +ELM + H L L + S M+ K + +
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELM----KKHGVLPNLYTYSAMIDGYCKTGNVRQ 287
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTM 215
+ +EI V F L+ FC +E+ ARS+FV ++ +F PN
Sbjct: 288 AYGLY----KEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMV-KFGVDPNLYVY 342
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G +SG++ EM P V TY I I+G C + +A RLF++M+
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
PS T +LIHG N+ QA L EM ++P+I ++ +I RD+ A
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AM L EM K I D VTY + K + ++ +LY M+E P T L+
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
F R+ + ++ + + C + L+ GLC G
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNG 563
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 122/265 (46%), Gaps = 3/265 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
++ ++ +C +++A ++ ++L + PN L+ GF ++ + VTA +F H M
Sbjct: 272 YSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVH-M 330
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P++ YN I G+CK G +A+ L EME + P + T T LI+G + +
Sbjct: 331 VKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQV 390
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +LF +M + P YN++I + ++ A++L EM + + +T+ T+
Sbjct: 391 AEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTL 450
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G ++ LY M VP T L+ + L L+ +++ G
Sbjct: 451 IDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGI 510
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFE 443
P+ H LV G GR A +
Sbjct: 511 HPNDHTFACLVDGFWKEGRLSVAID 535
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 115/271 (42%), Gaps = 3/271 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ + + C +M+EA +F +L+ + PN T + ++ G+ ++G+V Y E+
Sbjct: 237 YTIYILDLCRDNKMEEAEKMF-ELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEI 295
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
++ P+VV + +DG+CK A LF M + P+L LIHG N+
Sbjct: 296 LVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNM 355
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L EM NL PD+ Y +I+ L + A L +M+ +RI + TY+++
Sbjct: 356 LEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSL 415
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K +E L M P T L+ +C + + L+ + +G
Sbjct: 416 IHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGI 475
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P L+ +EA ML
Sbjct: 476 VPDVVTYTALIDAHFKEANMKEALRLYSDML 506
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/256 (22%), Positives = 116/256 (45%), Gaps = 6/256 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C + ++ EA +F K+ + R P++ T N L+ G+ + ++ EM
Sbjct: 377 YTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMT 436
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+++T++ IDGYC AM L+ EM +P + T T LI N+
Sbjct: 437 ASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMK 496
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+ +M + + P+ + ++ + L+ A++ E ++R ++V + +
Sbjct: 497 EALRLYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLI 556
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL ++ + + + M P + V ++K R+ + L +I G
Sbjct: 557 EGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGIL 616
Query: 420 PHGHALDLLVTGLCSR 435
P +LLV L +R
Sbjct: 617 P-----NLLVNQLLAR 627
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 118/299 (39%), Gaps = 37/299 (12%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSV---------------------------------- 247
FK+ G + E EM G +P+V
Sbjct: 210 FKQ-GLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPN 268
Query: 248 -VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
TY+ IDGYCK G A L++E+ LP++ TL+ G R + AR LF
Sbjct: 269 LYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFV 328
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
M K + P++ YN +I + ++ A+ L+ EME + D TY + GL
Sbjct: 329 HMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIED 388
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ +L+ +M + P + T L+ +C + ++ L+L + G P+
Sbjct: 389 QVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFS 448
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
L+ G C+ + A +M ++ +Y ++ + +AN E L M++
Sbjct: 449 TLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLE 507
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/309 (21%), Positives = 126/309 (40%), Gaps = 3/309 (0%)
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
KF F++L+ F +EA ++V + +P++K +L G ++ +
Sbjct: 129 KFSIGVFSLLIMEFLEMGLFEEA--LWVSREMKCSPDSKACLSILNGLVRRRRFDSVWVD 186
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
Y M+ RG P V Y + K+G + +L +EM + P++ T I
Sbjct: 187 YQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCR 246
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A ++F+ M K + P++ Y+AMI + ++ A L E+ + + V
Sbjct: 247 DNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVV 306
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ T+ G K+ L L+ M++ P L+ C + + + L +
Sbjct: 307 FGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEME 366
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANAN 473
P +L+ GLC + EA ++M R S A+Y ++ Y + N
Sbjct: 367 SLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNME 426
Query: 474 EKLEDLDRM 482
+ L+ M
Sbjct: 427 QALDLCSEM 435
>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
Length = 729
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 133/307 (43%), Gaps = 8/307 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N ++ +C +++AR + + F P+ T N L+ G V + +M+
Sbjct: 133 YNTMVNGYCRAGRIEDARRLISGM--PFPPDTFTFNPLIRALCVRGRVPDALAVFDDMLH 190
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG PSVVTY+I +D CK + AM L +EM C P + T LI+ ++ +
Sbjct: 191 RGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 250
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + ++P KPD Y ++ SL EL EM + D VT++T+
Sbjct: 251 ALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVT 310
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + ++ K+ D M E +P T ++ C RVD + L L G P
Sbjct: 311 SLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 370
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
A ++ GLCS +WE A E +M+ E ++ + L Q +D
Sbjct: 371 DTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGL------VD 424
Query: 481 RMIKNLQ 487
R IK ++
Sbjct: 425 RAIKVVE 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 145/349 (41%), Gaps = 22/349 (6%)
Query: 103 PDAFE-----KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
PD F + L + R+ ++ M H + PS++T SI+L K Y +
Sbjct: 160 PDTFTFNPLIRALCVRGRVPDALAVFDDMLH-RGCSPSVVT---YSILLDATCKASGYRQ 215
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNN 212
+ D M R G E +NVL+ A C + ++ EA ++ L S P+
Sbjct: 216 AMVLLDEM--------RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDA 267
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T +L S +E + EM P VT+N + C++G A+++ +
Sbjct: 268 VTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDH 327
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M C+P + T ++++ G V + A +L + KPD AY ++ L
Sbjct: 328 MSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQ 387
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
A ELM EM D VT++T+ L + ++ K+ ++M E P T
Sbjct: 388 WEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNS 447
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ C +D + L L G P + L+ GLCS RWE+A
Sbjct: 448 IIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDA 496
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 99/485 (20%), Positives = 179/485 (36%), Gaps = 63/485 (12%)
Query: 22 LLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
+L + +++ I++D P P + + P L + + LFA +
Sbjct: 237 VLINAMCNEGDVDEALNILSD--LPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMA 294
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
+ A P F + L + D+A +++ H+ H + + +
Sbjct: 295 SNKCA--------------PDEVTFNTIVTSLCQQGLVDRAIKVVDHMSE-HGCIPDIVT 339
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA 197
S +L + ++ +E R+ + +G + + +L+ C+ ++ + A
Sbjct: 340 YSSILDGLCDVGRVDDAVELLSRL--------KSYGCKPDTIAYTTVLKGLCSIEQWEHA 391
Query: 198 RSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ +++ S P+ T N ++ + G V +M G P +VTYN IDG
Sbjct: 392 EELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDG 451
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
C + C DAM L ++ C P + T TL+ G V A QL M + PD
Sbjct: 452 LCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPD 511
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEK-----------------RIGH--------- 350
+N +I+SL + L A+E + M E + G
Sbjct: 512 ATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLS 571
Query: 351 -------DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
D +TY+T+ + K+ +E L M+ P T T L C
Sbjct: 572 GMTNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGT 631
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D + + L D G P + ++ G C R + A +C M+ E++Y +L
Sbjct: 632 DRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIIL 691
Query: 464 QRYLV 468
L
Sbjct: 692 LEALA 696
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/276 (22%), Positives = 117/276 (42%), Gaps = 15/276 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C ++ + +A + L S P+ T N LL G E M+
Sbjct: 445 YNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMM 504
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P T+N I C+KG A+ + M C+P+ T ++
Sbjct: 505 HSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQ 564
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L M N PD+ YN +IS++ + + A++L+ M + D +TY ++
Sbjct: 565 EALKLLSGM--TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G+ + G + ++ R+ + P ++ FC N+R D+ ++ + +++ G
Sbjct: 623 YGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCM 682
Query: 420 PHGHALDLLVTGLCSRGRWEEAFEC----SKQMLVR 451
P +L+ L A+EC +KQ+LV
Sbjct: 683 PDESTYIILLEAL--------AYECLLDEAKQLLVN 710
>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
Length = 544
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 166/359 (46%), Gaps = 12/359 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A+EFFK ++ P +++ L L+ +A L S + P ++T +
Sbjct: 159 QAMEFFK-EMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT-CSPDIMTYNVLMD 216
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+I Q+YE + +EI + +++++ +C +++EA VF+K+
Sbjct: 217 GYCKIG--QTYEA-----QSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKM 269
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK-GC 262
+ S PN T N L+ GF ++G + + EM G + ++VTYN ID CKK G
Sbjct: 270 IESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGG 329
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A+ LF ++E P++ T +LI G R + +A Q FDEM + P++ Y+
Sbjct: 330 VYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSI 388
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L + R + A + +++M+ VTY + G K L+ +++M
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T L+ C R + GL L ++ G P + L++GLCS R E+A
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 507
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 145/352 (41%), Gaps = 43/352 (12%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
E +++LL A M EA ++F + +P+ T N+L+ G+ + G + E+
Sbjct: 177 ESYHILLSALSDSGRMAEAHALFSAMTC--SPDIMTYNVLMDGYCKIGQTYEAQSLMKEI 234
Query: 239 VLRGFRPSVVTYNIRID-----------------------------------GYCKKGCF 263
+ G+ P+V TY+I I+ G+CK G
Sbjct: 235 LKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGML 294
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVR-NIHQARQLFDEMPKRNLKPDIGAYNA 322
DA++LF EME++ C ++ T TLI R ++ A LF+++ L P I YN+
Sbjct: 295 EDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNS 354
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I R L+ AM+ DEME K + +TY + GL K ++ K + M
Sbjct: 355 LIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHG 413
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P T L+ FC + L + + G P+ + L+ GLC R +
Sbjct: 414 YTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGL 473
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
M + +Y L L AN ++ED R+ + A P T
Sbjct: 474 RLLCHMHAEGCKPDVITYNCLISGLCSAN---RVEDAQRLFDGM-ACAPNVT 521
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 141/309 (45%), Gaps = 12/309 (3%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + + +++ L R+ +E+ G+ + +NVL++ FC +M +A SVF +
Sbjct: 3 LLSGLVSARKHDQAL----RLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDM 58
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
S PN TMN LLLG E G +++ + EM F P+ ++NI + G+ G
Sbjct: 59 KSSGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRV 118
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGL----VRNIHQARQLFDEMPKRNLKPDIGA 319
DA+ ++M + + + T ++ G + QA + F EM ++PD+ +
Sbjct: 119 RDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLES 178
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y+ ++S+L + A L M D +TY+ + G K L ++
Sbjct: 179 YHILLSALSDSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEIL 235
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ + P T +++ +C +V+ ++ +I+ P+ + L+ G C G E
Sbjct: 236 KAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLE 295
Query: 440 EAFECSKQM 448
+A + +M
Sbjct: 296 DAIKLFAEM 304
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/315 (22%), Positives = 143/315 (45%), Gaps = 15/315 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
+ P + ++ ++ ++AWE+ + ++ P+ +T ++ ++ K E
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTL---IAGFCKAGMLE 295
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE-MKEARSVFVKL-LSRFAPNNKT 214
+ ++ F ME+ +G K +N L+ + C ++ + A +F KL + P T
Sbjct: 296 DAIKLFAEMEK---IGC-KATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVT 351
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ GF ++ ++ ++ EM + P+V+TY+I IDG CK +A + E+M+
Sbjct: 352 YNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMK 410
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P++ T LI+G + A F++M P+ +N +I L + N
Sbjct: 411 AHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERAN 470
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ L+ M + D +TY+ + GL ++ +E +L+D M P T L+
Sbjct: 471 DGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLI 527
Query: 395 KFFCVNFRVDLGLNL 409
+ C +V+ N+
Sbjct: 528 RGLCAQKKVEEARNI 542
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/273 (24%), Positives = 117/273 (42%), Gaps = 8/273 (2%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N LL + ++ +A +F ++L+ FAPN T N+L+ GF + G + + +M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+ T N + G C+ G A++LF EM+ LP+ + L+ G + +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLI----RCRDLNAAMELMDEMEEKRIGHDNVTYH 356
A +M K + G YN ++ L L AME EM+ + D +YH
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ L S + L+ M P T +LM +C + +L ++
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
G+ P+ +++ C + EEA+E +M+
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 97/224 (43%), Gaps = 15/224 (6%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ-RTHPSLLTLKSMSI 144
A++ F L+ TPT + + R +A + ++ + P+++T SI
Sbjct: 333 AVDLFN-KLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGKCAPNVITY---SI 388
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ + K + +E + + M+ + + +G L+ FC E+K A F K
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGG-----LINGFCKCGELKSALLFFEK 443
Query: 204 L-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ L+ APN N L+ G ++ M G +P V+TYN I G C
Sbjct: 444 MKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANR 503
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
DA RLF+ M AC P++ T LI G + + +AR + D
Sbjct: 504 VEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILD 544
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 63/135 (46%), Gaps = 1/135 (0%)
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL+ + + +L+ ++ G F P T +L++ FC ++ ++++ +
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANE 474
G P+ ++ L+ GLC G+ A + ++M + AS+ +L R + + +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 475 KLEDLDRMIKNLQAV 489
L L M K+ +V
Sbjct: 121 ALAHLQDMRKSSSSV 135
Score = 40.0 bits (92), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 1/174 (0%)
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA++S L+ R + A+ L E+ + TY+ + G K + ++ M
Sbjct: 1 NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T+ L+ C ++ L L+ + F P + ++L+ G GR +
Sbjct: 61 SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKNLQAVLPPP 493
A + M V+ +Y ++ + L N + +LE K ++A P
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEP 174
>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
Length = 737
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 147/304 (48%), Gaps = 7/304 (2%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+S F ++ EA+D + G+ S ++ L+ FC ++ ++A + ++ R
Sbjct: 139 LSAFVRKKKAQEAYDLFKNH-RCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 197
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+N N ++ G ++G V + + Y +M R PSV+TY I +D CK DA
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDAS 256
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ E+M C P++ T TLI+G + N+ +A LF++M + + PD+ YN +I
Sbjct: 257 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 316
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ +L+ EM + + +TY+T+ L+KS L M+ P
Sbjct: 317 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 376
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +++ FC ++DL L+ + DRG P + +++++G C R ++A +Q
Sbjct: 377 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA----RQ 432
Query: 448 MLVR 451
+L R
Sbjct: 433 LLER 436
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 137/305 (44%), Gaps = 1/305 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ +C Q+ ++ + +++ PN T N L+ +SG M+
Sbjct: 309 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 368
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R +PS T+N+ ID +CK G A LF+ M CLP + T +I GA I
Sbjct: 369 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 428
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
ARQL + M + PD+ YN+++S L + ++ A E+ + + D VT T+
Sbjct: 429 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 488
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS L+ KL M P +L+ FC ++D L + ++D+G
Sbjct: 489 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 548
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +++ LC R + K ML R Y + L ++++ ++ +L
Sbjct: 549 PTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYEL 608
Query: 480 DRMIK 484
+++K
Sbjct: 609 YKLMK 613
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 137/305 (44%), Gaps = 10/305 (3%)
Query: 154 SYEETLEAFDRMER-----EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL 204
+Y ++ + + ER ++ + K+G E +N L+ + + +A ++ +
Sbjct: 308 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 367
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L R P++ T N+++ F + G + + M RG P + TYNI I G C+
Sbjct: 368 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 427
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA +L E M C P + T +++ G + +A ++++ + D+ + +
Sbjct: 428 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 487
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + R L+ A +L+ EME D V Y + G K+ L+ + M++
Sbjct: 488 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 547
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
VP T +++ C + RV G L +++RG P ++ GLC ++EA+E
Sbjct: 548 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYE 607
Query: 444 CSKQM 448
K M
Sbjct: 608 LYKLM 612
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 108/263 (41%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+++ FC ++ A +F + R P+ T NI++ G + + M
Sbjct: 379 FNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMT 438
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VVTYN + G CK +A ++E + + T +TLI G R +
Sbjct: 439 EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLD 498
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM + PD+ AY +I + L+ ++ EM +K +TY +
Sbjct: 499 DAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVI 558
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L KS+ + C L M+E P ++ C + D L+ + G
Sbjct: 559 DKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCA 618
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P ++LV LC R +EA
Sbjct: 619 PTVVTYNVLVDKLCKVSRLDEAI 641
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/298 (24%), Positives = 125/298 (41%), Gaps = 4/298 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +AR + ++ + P+ T N ++ G ++ V Y +
Sbjct: 414 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 473
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G+ VVT + IDG CK DA +L EMER P + T LIHG +
Sbjct: 474 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLD 533
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++ F EM + P + Y+ +I L + + L+ M E+ + D + Y ++
Sbjct: 534 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVI 593
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +LY M + P T +L+ C R+D ++L + G
Sbjct: 594 DGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCL 653
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P + + G ++AF + M R + Y +L LV A EK++
Sbjct: 654 PDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLV---AEEKMD 708
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 136/320 (42%), Gaps = 12/320 (3%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
PD + + I R D A +L+ + P ++T S+ +S + K +E
Sbjct: 409 PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSI---VSGLCKASQVDEA 465
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNI 217
E ++ + G + L+ C + + +A + ++ + AP+ I
Sbjct: 466 YEVYEVLRN----GGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTI 521
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF ++ + F+ EM+ +G P+V+TY+I ID CK D L + M
Sbjct: 522 LIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 581
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P T++I G + +A +L+ M + P + YN ++ L + L+ A+
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L++ ME D VTY+++F G KS+ + +L+ M P +L+
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701
Query: 398 CVNFRVDLGLNLWGYLIDRG 417
++D + +W ++ G
Sbjct: 702 VAEEKMDQAMEIWEEALEAG 721
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 148/369 (40%), Gaps = 11/369 (2%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
HFT F + + ++ D A+EL + L + + +IM+S + ++
Sbjct: 376 HFT-----FNLMIDMFCKVGQLDLAYELF-QLMTDRGCLPDIYTYNIMISGACRANRIDD 429
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ +RM G +N ++ C ++ EA V+ L + + + T +
Sbjct: 430 ARQLLERMTE---AGCPP-DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCS 485
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +S + E EM G P VV Y I I G+CK ++ F EM
Sbjct: 486 TLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDK 545
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C+P++ T + +I + L M +R + PD Y ++I L + + A
Sbjct: 546 GCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEA 605
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
EL M++ VTY+ + L K S L+ L + M +P T T +
Sbjct: 606 YELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDG 665
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F + D L+ + RG P LL+T L + + ++A E ++ L V
Sbjct: 666 FWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725
Query: 457 EASYRMLQR 465
R LQ+
Sbjct: 726 PEISRTLQQ 734
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/230 (24%), Positives = 104/230 (45%), Gaps = 1/230 (0%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G++ S T N + + +K +A LF+ C P T +TLI+G R+ QA
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+L DEM KR + P YN +I L +++A+ +M ++ +TY +
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDA 245
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L KS+ + + + MIE P T L+ FC +D + L+ +++ P
Sbjct: 246 LCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPD 305
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++L+ G C + R ++ + ++M+ + + +Y L LV++
Sbjct: 306 VFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSG 355
>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580-like [Glycine max]
Length = 747
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 162/356 (45%), Gaps = 7/356 (1%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSR---ISKFQ 153
P AF K +H+L + ++ L+ V + P+L T L R + +
Sbjct: 212 LCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAV 271
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNN 212
+EA + + + + G +N ++ +C + +++A V + F P+
Sbjct: 272 RNSRVVEAEEYLRKMVNGGFEP-DDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDE 330
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T L+ GF + GD + + + +G RPS+V YN I G ++G A++L E
Sbjct: 331 FTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNE 390
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M CLP++ T +I+G + + A L D+ + PDI YN +I +
Sbjct: 391 MAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLK 450
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L++A E+++ M + + D +TY+T+ GL K+ E V +++ M E P T +
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNI 510
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ C +V+ ++L G + +G P + L TG C G + A++ ++M
Sbjct: 511 IVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 137/313 (43%), Gaps = 11/313 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD---------VTA 230
FN L+ C + + E+ + K+L R PN T NI + G G V
Sbjct: 219 FNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVE 278
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
E + +MV GF P +TYN IDGYCKKG DA R+ ++ P T +LI+
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + +A +F + + L+P I YN +I L + + A++LM+EM E
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ TY+ + GL K + L D I P T L+ +C ++D +
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ +G P + L+ GLC G+ EE E K M + + +Y ++ L +A
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518
Query: 471 -NANEKLEDLDRM 482
NE ++ L M
Sbjct: 519 KKVNEAVDLLGEM 531
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 59/277 (21%), Positives = 123/277 (44%), Gaps = 37/277 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A + +++ P + T N L+ G+ + + + + M
Sbjct: 403 YNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMW 462
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V+TYN ++G CK G + M +F+ ME C P++ T ++ + ++
Sbjct: 463 SQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVN 522
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK-RIGHDNVTYHTM 358
+A L EM + LKPD+ ++ + + + D++ A +L ME++ + H TY+ +
Sbjct: 523 EAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNII 582
Query: 359 ---------------FFGLMKSSG-----------LEGVCKLYD---------RMIEGKF 383
F +MK+SG ++G CK+ + +E +F
Sbjct: 583 VSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRF 642
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+P T ++ CV +V + + ++ +G P
Sbjct: 643 IPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 86/209 (41%), Gaps = 22/209 (10%)
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI-------HQARQLFDEMP 309
Y +KG +A+ FE M+ C PS +H + NI +QA +++ M
Sbjct: 86 YGRKGKVQEAVDTFERMDFYNCDPS-------VHSHNAIMNILVEFGYHNQAHKVYMRMR 138
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
R ++ D+ Y I S + AA+ L+ M E + V Y T+ GL S +
Sbjct: 139 DRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHD 198
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L+D M+ P L+ C V L G ++ RG CP+ ++ V
Sbjct: 199 HARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFV 258
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
GLC G + A VR +V EA
Sbjct: 259 QGLCREGALDRA--------VRNSRVVEA 279
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/424 (19%), Positives = 158/424 (37%), Gaps = 51/424 (12%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S TL+ + + ++ LKALE F F T ++ + L F++
Sbjct: 1 MSRTLLPKHVAAVVKIQTDPLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEME 60
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME----------------- 166
+L+S ++ + L + + + +E ++ F+RM+
Sbjct: 61 KLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNI 120
Query: 167 ----------REIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-- 210
++++ +R G + + + +++FC K AR L R P
Sbjct: 121 LVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFC-----KTARPYAALRLLRNMPEL 175
Query: 211 ----NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
N ++ G +SG+ + EM+ R P VV +N + CKKG ++
Sbjct: 176 GCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFES 235
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAG-------LVRN--IHQARQLFDEMPKRNLKPDI 317
RL ++ + P+L T + G VRN + +A + +M +PD
Sbjct: 236 ERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDD 295
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN++I + + A ++ + K D TY ++ G K + ++
Sbjct: 296 LTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKD 355
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+ P L+K + L L + + G P+ +L++ GLC G
Sbjct: 356 GLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGC 415
Query: 438 WEEA 441
+A
Sbjct: 416 VSDA 419
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 106/251 (42%), Gaps = 22/251 (8%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
D + K L + + ++ W Q P ++T ++ L+ + K EE +E F
Sbjct: 443 DGYCKQLKLDSATEMVNRMWS-----QGMTPDVITYNTL---LNGLCKAGKSEEVMEIFK 494
Query: 164 RMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
ME + G +N+++ + C K++ EA + ++ S+ P+ + L
Sbjct: 495 AMEEK--------GCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTL 546
Query: 219 LLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
GF + GD+ + M + + TYNI + + ++ AM+LF M+
Sbjct: 547 FTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSG 606
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P T +I G + NI Q + E ++ P + + +++ L ++ A+
Sbjct: 607 CDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAV 666
Query: 338 ELMDEMEEKRI 348
++ M +K I
Sbjct: 667 GIIHLMLQKGI 677
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/222 (20%), Positives = 94/222 (42%), Gaps = 13/222 (5%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEE 157
TP + L+ L + ++ E+ ++ P+++T +I++ + K + E
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITY---NIIVDSLCKAKKVNE 523
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTM 215
++ M+ + K F L FC ++ A +F ++ ++ T
Sbjct: 524 AVDLLGEMKSKGL----KPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATY 579
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR-LFEEME 274
NI++ F E ++ + M G P TY + IDG+CK G + L E ME
Sbjct: 580 NIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENME 639
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ +PSL T +++ + +H+A + M ++ + P+
Sbjct: 640 K-RFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPE 680
>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 546
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/324 (26%), Positives = 155/324 (47%), Gaps = 2/324 (0%)
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++ R+I + K E ++ ++ A C + + EA +F ++ + + + T + L+ GF
Sbjct: 185 KLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGF 244
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
G + +EMVL+ P+V TYNI +D CK+G +A + M + P +
Sbjct: 245 CIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDV 304
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +TL+ G LV + +A+ +F+ M + PD+ Y +I+ + + ++ A+ L E
Sbjct: 305 ITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKE 364
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M +K + VTY ++ GL KS + V L D M + T L+ C N
Sbjct: 365 MHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGH 424
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR- 461
+D + L+ + D+ P+ +L+ GLC GR ++A E + +L + ++ +Y
Sbjct: 425 LDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNV 484
Query: 462 MLQRYLVQANANEKLEDLDRMIKN 485
M+ + Q E L L +M N
Sbjct: 485 MINGHCKQGLLEEALTMLSKMEDN 508
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 134/272 (49%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ A C + ++KEA+SV V L + P+ T + L+ G+ +V + ++ M
Sbjct: 272 YNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMS 331
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P V TY I I+G+CK +A+ LF+EM + +P + T ++LI G I
Sbjct: 332 LMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIP 391
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
L DEM R D+ Y+++I L + L+ A+ L ++M+++ I + T+ +
Sbjct: 392 YVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILL 451
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +++ ++ + T +++ C ++ L + + D G
Sbjct: 452 DGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCI 511
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ + ++ L + ++A + +QM+ R
Sbjct: 512 PNAFTFETIIIALFKKDENDKAEKLLRQMIAR 543
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L +K + Y + R+E + GI+ N+L+ FC ++ SV K+
Sbjct: 65 ILDSFAKMKHYSTAVSLSHRLELK---GIQP-DLITLNILINCFCHMGQITFGFSVLAKI 120
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L R + P+ T+N L+ G G V F+ +++ +GF+ + V+Y I+G CK G
Sbjct: 121 LKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDT 180
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A++L +++ P+++ +T+I + + +A LF EM + + D+ Y+ +
Sbjct: 181 RGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTL 240
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L A+ L++EM K I + TY+ + L K ++ + M++
Sbjct: 241 IYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACV 300
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM + + + V +++ + G P H +L+ G C +EA
Sbjct: 301 KPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALN 360
Query: 444 CSKQM 448
K+M
Sbjct: 361 LFKEM 365
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/251 (20%), Positives = 109/251 (43%), Gaps = 1/251 (0%)
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ + +A S F ++L R P N +L F + + H + L+G +P ++T
Sbjct: 38 QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI I+ +C G + ++ + P T+ TLI G L + +A D++
Sbjct: 98 NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ + + +Y +I+ + + D A++L+ +++ + + Y T+ L K +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
L+ M T L+ FC+ ++ + L ++ + P+ + ++LV
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277
Query: 431 GLCSRGRWEEA 441
LC G+ +EA
Sbjct: 278 ALCKEGKVKEA 288
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/230 (20%), Positives = 92/230 (40%), Gaps = 2/230 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ M+ P ++ +N +D + K + A+ L +E P L T+ LI+
Sbjct: 47 FNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCH 106
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ I + ++ KR PD N +I L + A+ D++ + + V+
Sbjct: 107 MGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 166
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y T+ G+ K G KL R I+G+ P ++ C V L+ +
Sbjct: 167 YATLINGVCKIGDTRGAIKLL-RKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 225
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+G L+ G C G+ +EA +M+++ + +Y +L
Sbjct: 226 TVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNIL 275
>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
Length = 768
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 142/294 (48%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N+ ++ C ++EA ++ ++ + AP+ T N L+ G + V + M+ +
Sbjct: 250 NIWIRGLCEDGRLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQ 309
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P TYN IDGYCK G +A L ++ +P T +LI+G +I +A
Sbjct: 310 GCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERA 369
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+LF+E ++LKPD+ YN+++ L R + A+++M+EM E+ D TY+ + G
Sbjct: 370 LELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIING 429
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L K + + + I ++P T L+ +C ++D L L + G P
Sbjct: 430 LCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPD 489
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ ++ GLC G+ +E E ++M+++ + + +Y +L + N E+
Sbjct: 490 VITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEE 543
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/306 (22%), Positives = 147/306 (48%), Gaps = 2/306 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C Q + A V +++ P+ T NI++ G + G+++ + ++ +
Sbjct: 388 YNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAI 447
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G+ P V T+N IDGYCK+ A++L E M P + T ++++G
Sbjct: 448 VKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAK 507
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + F+EM + +P+ YN +I + + L A ++ M + + D V+++T+
Sbjct: 508 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLI 567
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ L+G L+ ++ E + T +L+ + + + ++G +I +G+
Sbjct: 568 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 627
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLED 478
P + +LV GLC + A+ +M+ + S A++ RML + +E +
Sbjct: 628 PDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAI 687
Query: 479 LDRMIK 484
+ M++
Sbjct: 688 IHIMVR 693
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 131/302 (43%), Gaps = 2/302 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C + +++ A +F + ++ P+ N L+ G G + +EMV G
Sbjct: 356 LINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEG 415
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P + TYNI I+G CK G DA + + LP + T TLI G + A
Sbjct: 416 CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSAL 475
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL + M + PD+ YN++++ L + E +EM K + +TY+ +
Sbjct: 476 QLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENF 535
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K + LE + RM + VP + L+ FC N +D L+ L ++G+
Sbjct: 536 CKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATA 595
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDR 481
++L+ S+ + A + +M+ + + +YR+L L + AN + L
Sbjct: 596 DTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAE 655
Query: 482 MI 483
MI
Sbjct: 656 MI 657
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 59/241 (24%), Positives = 110/241 (45%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C + ++ A + ++ + AP+ T N +L G ++G + + EM+
Sbjct: 458 FNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMI 517
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G RP+ +TYNI I+ +CK +A + M + +P + TLIHG ++
Sbjct: 518 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLD 577
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF ++ ++ +N +I + ++ A ++ EM K D TY +
Sbjct: 578 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILV 637
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K++ ++ MI FVP T ++ +N RV + + ++ G
Sbjct: 638 DGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVV 697
Query: 420 P 420
P
Sbjct: 698 P 698
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 115/269 (42%), Gaps = 4/269 (1%)
Query: 185 LQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+QA+ ++ A F ++ L P N ++ + Y M+ G
Sbjct: 78 IQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGV 137
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P T+ +R+ +C G A+RL + C T++ G + + AR
Sbjct: 138 APDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARH 197
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
LFDEM R++ PD+ +N ++ +L + D+ + L+ ++ ++ + + T + GL
Sbjct: 198 LFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLC 257
Query: 364 KSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ LE L +RM G +V P T LM+ C + +V G ++++G P
Sbjct: 258 EDGRLEEAVALVERM--GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDD 315
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ ++ G C G +EA E K + +
Sbjct: 316 FTYNTIIDGYCKSGMLQEATELLKDAVFK 344
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 90/247 (36%), Gaps = 12/247 (4%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I Y + G A+ FE M+ AC P+ ++ QA +++ M
Sbjct: 74 YVASIQAYARAGRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRML 133
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ PD + + S + A+ L+ + E+ Y T+ GL
Sbjct: 134 AAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGY 193
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
L+D M+ P T ++ C V L ++ RG + ++ +
Sbjct: 194 NARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWI 253
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEA----SYRMLQRYLVQ-ANANEKLEDLDRMIK 484
GLC GR EEA LV R A +Y L R L + + E + L RM+
Sbjct: 254 RGLCEDGRLEEAVA-----LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMN 308
Query: 485 NLQAVLP 491
Q +P
Sbjct: 309 --QGCIP 313
>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 154/337 (45%), Gaps = 8/337 (2%)
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
++ P+ T + ++L + K E L I GI G + L+
Sbjct: 215 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM------ISEGIAPDGVI-YTTLIDG 267
Query: 188 FCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
FC + A +F ++ R +P+ T ++ G ++G V + +HEMV + P
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VTY IDGYCK+G +A L +M ++ P++ T T L G + A +L
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM ++ L+ +I YN++++ L + +++ A++LM +ME D VTY T+ KS
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ +L +M++ + P T +LM FC++ ++ G L +++++G P+ +
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L+ C R E + M + +Y +L
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 544
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C ++ EA V +++S AP+ L+ GF + G+V++ + EM
Sbjct: 226 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQ 285
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P +TY I G C+ G +A +LF EM P T T LI G +
Sbjct: 286 KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMK 345
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L ++M + L P+I Y A+ L +C +++ A EL+ EM K + + TY+++
Sbjct: 346 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 405
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ ++ KL M F P T LM +C + + L ++DR
Sbjct: 406 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ 465
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQAN 471
P ++L+ G C G E+ + K ML + + +Y ++++Y ++ N
Sbjct: 466 PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 518
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 9/324 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSV 200
+ ++ K + FD M++ RK + + ++ C + EA +
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQK------RKISPDFITYTAVICGLCQTGRVMEADKL 315
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F +++ R P+ T L+ G+ + G + +++M+ G P++VTY DG CK
Sbjct: 316 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 375
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A L EM R ++ T +L++G NI QA +L +M PD
Sbjct: 376 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 435
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y ++ + + R++ A EL+ +M ++ + VT++ + G S LE KL M+
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E +P T L+K +C+ + ++ + +G P G+ ++L+ G C +
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 555
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
EA+ + M+ + ++ +SY L
Sbjct: 556 EAWFLHRDMVGKGFNLTVSSYNAL 579
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/227 (30%), Positives = 102/227 (44%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM ++G +P+ TYN I CK G +A R+ EM P TTLI G +
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLG 272
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ A +LFDEM KR + PD Y A+I L + + A +L EM KR+ D VTY
Sbjct: 273 NVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYT 332
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G K ++ L+++M++ P T L C VD L + +
Sbjct: 333 ALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRK 392
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G + + + LV GLC G ++A + K M V +Y L
Sbjct: 393 GLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTL 439
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C +EM A + ++L R P T N+L+ GF SG + E M+
Sbjct: 436 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 495
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TYN I YC + ++ M +P T LI G RN+
Sbjct: 496 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 555
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M + + +YNA+I + + A EL ++M + + D Y+ +F
Sbjct: 556 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN-IF 614
Query: 360 FGLMKSSG-LEGVCKLYDRMIEGKFVPKTRT 389
+ G +E +L D IE V +T
Sbjct: 615 ADINYDEGKMELTLELCDEAIEKCLVGDIQT 645
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 157/390 (40%), Gaps = 38/390 (9%)
Query: 14 PGISDRLALLFSTTTQSSEIERITR-IINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENV 72
P + + LL T + +E ER+ R +I++ PD ++ TL+ + +SS
Sbjct: 223 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY---- 278
Query: 73 LGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFE--KTLHILARMRY------------ 118
RLF + +F +T T E K H + R
Sbjct: 279 --RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 336
Query: 119 -------FDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
+A+ L + + + P+++T +++ L + + + E L R E+
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV 228
+ +N L+ C + +A + + ++ F P+ T L+ + +S ++
Sbjct: 397 NI-------YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+M+ R +P+VVT+N+ ++G+C G D +L + M +P+ T +L
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 509
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I + N+ +++ M + + PD YN +I + R++ A L +M K
Sbjct: 510 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 569
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+Y+ + G K +L+++M
Sbjct: 570 NLTVSSYNALIKGFYKRKKFLEARELFEQM 599
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 92/227 (40%), Gaps = 11/227 (4%)
Query: 266 AMRLFEEMERVACLPSLQTITTLI-------HGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
A +LF++M L S+ + I G + +L +EM + LKP+
Sbjct: 165 ARKLFDKMLNYGLLISVDSCNLFISHLSEDLDGIKIALKGEWVLKLIEEMQIKGLKPNPY 224
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +I L + + A ++ EM + I D V Y T+ G K + +L+D M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ K P T ++ C RV L+ ++ + P L+ G C G+
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDR 481
+EAF QML + +Y L L + ANE L ++ R
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391
>gi|410109947|gb|AFV61053.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
salviifolia]
Length = 431
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 160/352 (45%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G + +N L+ + + E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + + EM+++G P+ VT+ IDG+CK
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L D+M ++ LKPD
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKIT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL++A E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 122/262 (46%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 189 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLSKESKMDDADELFDEMLVKGLVPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + Y L L Q
Sbjct: 309 SRKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 367 -RSVDAEKMLREMLSVGLNPDT 387
>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
Length = 440
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/342 (25%), Positives = 157/342 (45%), Gaps = 38/342 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C M +A++++ +++ + ++P+ T N LL GF + G++ + V
Sbjct: 13 YNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAV 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
RGF P VVTYN I+G+CK +A R+ + M +P + T +L++G
Sbjct: 73 KRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVD 132
Query: 292 ----------------------AGL---VRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+GL +R + +A +LF + K+ +P++ YN +I
Sbjct: 133 EARMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDG 192
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L++ +N A EL + + + D +TY GL K+ +E + M E VP
Sbjct: 193 LLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPD 252
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ ++ C RVD L + +G P+ + + L+ G C G+W++A K
Sbjct: 253 VVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFK 312
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLED----LDRMIK 484
+ML R + + +Y +L L +A ++++ D MI+
Sbjct: 313 EMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIE 354
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 117/242 (48%), Gaps = 4/242 (1%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F PN T N LL G G ++ + Y M+ G+ P VVTYN + G+CK G +A+
Sbjct: 6 FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEAL 65
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
++F+ + +P + T LI+G + +A+++ M NL PD+ YN++++ L
Sbjct: 66 KIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGL 125
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS-SGLEGVCKLYDRMIEGKFVPK 386
+ ++ A L + +K + +TY T+ GL + G+ KL+ +++ + P+
Sbjct: 126 CKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPE 182
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +L+ RV+ L+ L+ G P + + GLC GR E+A K
Sbjct: 183 VPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLK 242
Query: 447 QM 448
M
Sbjct: 243 DM 244
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 119/247 (48%), Gaps = 7/247 (2%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF P+ +TYN + G C G DA L+E M + P + T TL+HG V + +A
Sbjct: 5 GFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEA 64
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++FD KR PD+ YNA+I+ + L+ A ++ M + + D VTY+++ G
Sbjct: 65 LKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNG 124
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR-VDLGLNLWGYLIDRGFCP 420
L K+ ++ L +++ F P T L+ C R V L L+G ++ +G+ P
Sbjct: 125 LCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEP 181
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
++L+ GL R EAFE ++ + +Y + L +A ++ED
Sbjct: 182 EVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG---RVEDAL 238
Query: 481 RMIKNLQ 487
M+K++
Sbjct: 239 LMLKDMD 245
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 125/269 (46%), Gaps = 7/269 (2%)
Query: 181 FNVLLQAFCTQ-KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
++ L+ C + + + EA +F +L + + P T NIL+ G + V + +
Sbjct: 150 YSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGL 209
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P +TY + IDG CK G DA+ + ++M+ C+P + + +I+G + +
Sbjct: 210 VKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRV 269
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L M + P+ ++N +I R AM EM ++ + VTY+ +
Sbjct: 270 DEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNIL 329
Query: 359 FFGLMKSSGLEGVCK----LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
GL K+ EG K L+D MIE VP T L+ ++D L G +
Sbjct: 330 VDGLCKAR-QEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAME 388
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+G P+ + + L++GLC + +EA E
Sbjct: 389 AKGCIPNVYTYNSLISGLCGLEKVDEALE 417
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/361 (24%), Positives = 157/361 (43%), Gaps = 37/361 (10%)
Query: 24 FSTTTQSSEIERI-TRIINDHPFPDQPLHPTLLQHLPQTTPLS----------------- 65
F + E +RI R+++++ PD + +L+ L + +
Sbjct: 90 FCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVIT 149
Query: 66 -STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
STL+ + L +AL+ F L+ + P + + L + ++A+E
Sbjct: 150 YSTLISGLCRELRGVS----EALKLFGSVLKQ-GYEPEVPTYNILIDGLLKEDRVNEAFE 204
Query: 125 LMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
L S + + P +T ++ + + K E+ L M+ + V N
Sbjct: 205 LFSGLVKHGLEPDAIT---YTVFIDGLCKAGRVEDALLMLKDMDEKGCVP----DVVSHN 257
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++ C +K + EA + + ++ +PN + N L+ G +G + EM+ R
Sbjct: 258 AVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKR 317
Query: 242 GFRPSVVTYNIRIDGYCK---KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G +P+VVTYNI +DG CK +G +A+ LF+ M +P + T + LI G G +
Sbjct: 318 GVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKL 377
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
AR+L M + P++ YN++IS L ++ A+EL M EK D +TY T+
Sbjct: 378 DDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTI 437
Query: 359 F 359
Sbjct: 438 I 438
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 110/255 (43%), Gaps = 28/255 (10%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A E F ++H PDA T+ I + + R +LL LK M
Sbjct: 201 EAFELFSGLVKHGL---EPDAITYTVFI-----------DGLCKAGRVEDALLMLKDMD- 245
Query: 145 MLSRISKFQSYEETLEAFDRMER----EIFV-GIRKFGSE----EFNVLLQAFCTQKEMK 195
+ S+ + + +R E+ + G+ G FN L+ C + K
Sbjct: 246 EKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWK 305
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGF---KESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+A + F ++L R P T NIL+ G ++ G + + M+ +G P VVTY+
Sbjct: 306 KAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYS 365
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
IDG K G DA RL ME C+P++ T +LI G + + +A +LF M ++
Sbjct: 366 ALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEK 425
Query: 312 NLKPDIGAYNAMISS 326
PD Y +IS+
Sbjct: 426 GCVPDTITYGTIISA 440
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M K P+ YNA++S L ++ A L + M + D VTY+T+ G K
Sbjct: 1 MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L+ K++D ++ FVP T L+ FC ++D + ++ P +
Sbjct: 61 LDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNS 120
Query: 428 LVTGLCSRGRWEEA 441
LV GLC GR +EA
Sbjct: 121 LVNGLCKNGRVDEA 134
>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 520
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/339 (24%), Positives = 158/339 (46%), Gaps = 7/339 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
S ++ + K + +E + + M R IF + + + L+ FC ++ EA +
Sbjct: 154 STIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTT-----LICGFCLAGQLMEAFGLL 208
Query: 202 VK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ +L PN T N L+ + G V + M +G +P VV Y+I +DGYC
Sbjct: 209 NEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLV 268
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A ++F M + P + + +I+G + + +A L EM +N+ PD Y
Sbjct: 269 GEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTY 328
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+++I L + + ++L EM + + VTY+++ GL K+ L+ L+ +M E
Sbjct: 329 SSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKE 388
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T L+ C R+ G L+ +L+ +G+C ++++GLC G ++E
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDE 448
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
A +M + ++ ++ R L++ + N+K E L
Sbjct: 449 ALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKL 487
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 96/389 (24%), Positives = 173/389 (44%), Gaps = 17/389 (4%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSY 155
H P + F K L L +M+++ L ++ P L+TL SI+ I+ F
Sbjct: 6 HIPPIIE-FGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTL---SIL---INCFCHL 58
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ +F + + + +G + + N L++ C + E+K++ K++++ F + +
Sbjct: 59 GQMAFSFSVLGKILKLGYQP-NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVS 117
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
ILL G + G+ + R RP VV Y+ IDG CK +A L+ EM
Sbjct: 118 YGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMN 177
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P + T TTLI G L + +A L +EM +N+ P+I YN +I +L + +
Sbjct: 178 ARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVK 237
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ L+ M +K + D V Y + G ++ +++ M++ P + +++
Sbjct: 238 ESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIII 297
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C RVD +NL ++ + P L+ GLC GR + +K+M R +
Sbjct: 298 NGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQP 357
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ +Y L L K ++LD+ I
Sbjct: 358 ANLVTYNSLLDGLC------KNQNLDKAI 380
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 107/241 (44%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ +C E+++A+ +F+ ++ + P+ + NI++ G + V EM+
Sbjct: 258 YSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREML 317
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P VTY+ IDG CK G + L +EM +L T +L+ G +N+
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF +M +R ++P+ Y A+I L + L L + K D TY M
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMI 437
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + + +M + +P T ++++ D L +I +G
Sbjct: 438 SGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497
Query: 420 P 420
P
Sbjct: 498 P 498
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 46/227 (20%), Positives = 93/227 (40%), Gaps = 2/227 (0%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+L P ++ + + K + + L ++ME +P L T++ LI+ +
Sbjct: 1 MLLLRHIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQ 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ + + ++ K +P+ N ++ L ++ ++ D++ + D V+Y
Sbjct: 61 MAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI 120
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K KL R IE + P ++ C + VD +L+ + R
Sbjct: 121 LLNGLCKIGETRCAIKLL-RTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNAR 179
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P L+ G C G+ EAF +M+++ + +Y L
Sbjct: 180 GIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTL 226
>gi|357455845|ref|XP_003598203.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487251|gb|AES68454.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 503
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 182/401 (45%), Gaps = 23/401 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PSLLTLKSMSI 144
AL F+ P+ + ++ + I++++ FD A +L+ + + + P T + I
Sbjct: 78 ALSLHNFSKSLPNPPLSLQSYNLLIDIVSKVHQFDLASQLIVEMDQINLPP--TPTTFFI 135
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ R+ + + AF+ +E K S+ F LL C +K A +F +
Sbjct: 136 LIKRLISANLTRQAVRAFNEIES---YTDTKLTSDHFTYLLDTLCKYGYVKHACELFNRN 192
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+RF + K +L+ G+ + G F +EM ++G P+VVTYN+ ++G C+K
Sbjct: 193 SNRFVADVKMYTVLIYGWCKIGRFKTALSFLNEMKVKGVEPNVVTYNVILNGICRKASLH 252
Query: 265 ----------DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE---MPKR 311
DA ++F+EM P + + + ++H + H+ + + D+ M ++
Sbjct: 253 PEERFERTIRDAEKVFDEMRESGIEPDVTSFSIVLH---VYSRAHKPQLVLDKLGLMKEK 309
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
+ P++ Y ++I L C + A +L+DEM + TY+ F +
Sbjct: 310 GICPNVVTYTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKA 369
Query: 372 CKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
K + +M E G P T T +L+ F + + +W +++ G P + +L+
Sbjct: 370 LKFFKKMKEDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIH 429
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
GLC +W EA + +M+ + + ++ L R L+Q++
Sbjct: 430 GLCESKKWREACQYFVEMIEKGFLPQKVTFETLYRGLIQSD 470
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 111/261 (42%), Gaps = 17/261 (6%)
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSY--EETLEAFDRMEREIFVGIRKFGSE----EFN 182
V+ P+++T +++L+ I + S EE E R ++F +R+ G E F+
Sbjct: 228 VKGVEPNVVT---YNVILNGICRKASLHPEERFERTIRDAEKVFDEMRESGIEPDVTSFS 284
Query: 183 VLLQAFCTQKEMKEARSVFVKL----LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
++L + + + V KL PN T ++ G + E EM
Sbjct: 285 IVLHVY---SRAHKPQLVLDKLGLMKEKGICPNVVTYTSVIKCLCSCGRIEEAEDLIDEM 341
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRN 297
V G P TYN Y + A++ F++M E C P+ T LI
Sbjct: 342 VRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMKEDGLCEPTTHTYGVLIAMFLKADM 401
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I ++++++M + + PD+ +Y +I L + A + EM EK VT+ T
Sbjct: 402 IGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKWREACQYFVEMIEKGFLPQKVTFET 461
Query: 358 MFFGLMKSSGLEGVCKLYDRM 378
++ GL++S L +L R+
Sbjct: 462 LYRGLIQSDMLRTWRRLKKRL 482
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/181 (20%), Positives = 76/181 (41%), Gaps = 7/181 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ C+ ++EA + +++ + +P T N ++ D F+ +M
Sbjct: 318 YTSVIKCLCSCGRIEEAEDLIDEMVRNGVSPCAATYNCFFKEYRGRKDADKALKFFKKMK 377
Query: 240 LRGF-RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P+ TY + I + K G ++ +M P L + T LIHG +
Sbjct: 378 EDGLCEPTTHTYGVLIAMFLKADMIGVVKEIWNDMMESGVGPDLDSYTVLIHGLCESKKW 437
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A Q F EM ++ P + + LI+ L L +KR+ +++T+ +
Sbjct: 438 REACQYFVEMIEKGFLPQKVTFETLYRGLIQSDMLRTWRRL-----KKRLDQESITFGSE 492
Query: 359 F 359
F
Sbjct: 493 F 493
>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 106/418 (25%), Positives = 184/418 (44%), Gaps = 29/418 (6%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-VQR-THPSLLTLKSMSIMLSRISK 151
L +P + L L QA E++ +QR +P ++T +I++ +
Sbjct: 195 LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITY---TILIEATCR 251
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-- 205
+ ++ D M R G +NVL+ C + + EA +K L
Sbjct: 252 DSGVGQAMKLLDEM--------RDRGCTPDVVTYNVLVNGICKEGRLDEA----IKFLND 299
Query: 206 ---SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
S PN T NI+L +G E +M+ +GF PSVVT+NI I+ C+KG
Sbjct: 300 MPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGL 359
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
G A+ + E+M + C P+ + L+HG + + +A + + M R PDI YN
Sbjct: 360 LGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNT 419
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M+++L + + A+E+++++ K +TY+T+ GL K+ KL D M
Sbjct: 420 MLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKD 479
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T T L+ +VD + + G P+ + ++ GLC + + A
Sbjct: 480 LKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAI 539
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
+ M+ R + +E SY +L L + A E LE L+ + + ++ + +QVA
Sbjct: 540 DFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLNELCN--KGLMKRSSAEQVA 595
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 170/382 (44%), Gaps = 17/382 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
E FKF + PD T I RM +A +++ ++ + P ++T +
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITY---N 176
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+M+S K L DRM V +N +L++ C ++K+A V +
Sbjct: 177 VMISGYCKAGEINNALSVLDRMSVSPDV-------VTYNTILRSLCDSGKLKQAMEVLDR 229
Query: 204 LLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+L R P+ T IL+ ++SG AM++ EM RG P VVTYN+ ++G CK+G
Sbjct: 230 MLQRDCYPDVITYTILIEATCRDSGVGQAMKLL-DEMRDRGCTPDVVTYNVLVNGICKEG 288
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A++ +M C P++ T ++ A +L +M ++ P + +N
Sbjct: 289 RLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFN 348
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ L R L A++++++M + ++++Y+ + G K ++ + +RM+
Sbjct: 349 ILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSR 408
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T ++ C + +V+ + + L +G P + ++ GL G+ +A
Sbjct: 409 GCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKA 468
Query: 442 FECSKQMLVRRRQVSEASYRML 463
+ +M + + +Y L
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSL 490
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 105/236 (44%), Gaps = 3/236 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F MV G P ++ I G+C+ G A ++ E +E +P + T +I G
Sbjct: 124 FLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYC 183
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
I+ A + D M ++ PD+ YN ++ SL L AME++D M ++ D +
Sbjct: 184 KAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVI 240
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + + SG+ KL D M + P T +L+ C R+D + +
Sbjct: 241 TYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDM 300
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G P+ ++++ +CS GRW +A + ML + S ++ +L +L +
Sbjct: 301 PSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCR 356
>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Brachypodium distachyon]
Length = 739
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 82/332 (24%), Positives = 151/332 (45%), Gaps = 36/332 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C +++ A VF ++ ++ +PN +T L+ GF +S + M + MV
Sbjct: 215 YNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMV 274
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+VVTY I G C G A RL + ME +P+ T + LI +
Sbjct: 275 DAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVG 334
Query: 300 QARQLFDEMPKRNLK-----------------------------------PDIGAYNAMI 324
+A+ L + ++ +K PD Y+++I
Sbjct: 335 EAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLI 394
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L R ++L+ AM ++D+M EK + VTY + L++ G +G K+ D+MI
Sbjct: 395 DGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIK 454
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T + ++ +C R++ ++ +++D G CP+ + L+ G + G +AF
Sbjct: 455 PDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFST 514
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
K M+ + +E SY +L R L++ ++ +
Sbjct: 515 FKHMVANGCKPNEESYTVLLRLLIKKESSNNI 546
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 135/314 (42%), Gaps = 6/314 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C ++ ++ LL + FAP++ ++G+ +G + + M
Sbjct: 75 YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LRG + TY + G C G +AM +F M+ C P T++HG
Sbjct: 135 LRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTR 194
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L + +P++ YNA+I DL A+++ + M+ + TY +
Sbjct: 195 EAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELI 254
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G KS L+ L+ RM++ VP T L++ C + ++D L + + G
Sbjct: 255 SGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLV 314
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +L+ LC R EA ++ + +V+E Y L L +A +
Sbjct: 315 PNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG---RFAAA 371
Query: 480 DRMIKNL--QAVLP 491
DR+++ L Q +P
Sbjct: 372 DRLMQTLVSQGFVP 385
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 118/308 (38%), Gaps = 17/308 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ + ++ + K+++ P+ T I + + G + E MV
Sbjct: 425 YTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMV 484
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH--------- 290
G P++VTYN I GY G A F+ M C P+ ++ T L+
Sbjct: 485 DHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSN 544
Query: 291 -------GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+ + L +EM K L +I YN ++SL R L+ A L+ EM
Sbjct: 545 NIPANSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM 604
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+ + Y ++ + L D M++ ++P+ + ++ C +
Sbjct: 605 QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSI 664
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++G ++ + + A +L+ GL +G E M + + S+A Y L
Sbjct: 665 QTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARL 724
Query: 464 QRYLVQAN 471
+ AN
Sbjct: 725 TGKITDAN 732
>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 614
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + A + +++ R P+ T L+ G G + +++M+
Sbjct: 207 YNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQML 266
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ +P V T+NI +DG CK+G A + M + ++ T +L+ G LV+ +
Sbjct: 267 LKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQEN 326
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+ M +R + PD+ +Y+ MI+ L + + ++ A+ L EM K + + VTY+++
Sbjct: 327 KATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLI 386
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+K + L + M T L+ C N +VD + L + D+G
Sbjct: 387 DGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQ 446
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLED 478
P+ + +LV GLC GR ++A + +L++ + Y ++ L + +E L
Sbjct: 447 PNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSL 506
Query: 479 LDRMIKN 485
+ +M N
Sbjct: 507 VSKMEDN 513
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 179/441 (40%), Gaps = 57/441 (12%)
Query: 99 FTPTPDAFEKTLHILARMRY----------FDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
F TP+ F H +R+ Y D A +H+ + + + +LS
Sbjct: 16 FPSTPNLFLLCRH--SRLYYTQPLPSFIDNVDDAVSSFNHILHMRNPVQPIFEFNKILSS 73
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ K + + +ME +++ + FN+L+ FC + A SV K+
Sbjct: 74 LVKLNHFHTAISFSKQME------LKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIFK 127
Query: 207 -RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF---------------------- 243
F P+ T+ L+ G +G V F+ +++ +GF
Sbjct: 128 LGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRA 187
Query: 244 -------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+P+VV YN ID CK A L EM P + T TTLI+
Sbjct: 188 ALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIY 247
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G +V + +A LF++M +N+KPD+ +N ++ L + ++ A ++ M ++ +
Sbjct: 248 GCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDS 307
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ VTY+++ G +++ M P ++ +++ C VD +NL+
Sbjct: 308 NIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLF 367
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ + P+ + L+ GL GR +A++ +M R + +Y L L +
Sbjct: 368 KEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKN 427
Query: 471 NANEKLEDLDRMIKNLQAVLP 491
+ +K L IK+ Q + P
Sbjct: 428 HQVDKAITLITKIKD-QGIQP 447
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ C + EMK+AR+V ++ + +N T N L+ G+ ++ M
Sbjct: 277 FNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMA 336
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P V +Y+I I+G CK +A+ LF+EM + P+ T +LI G I
Sbjct: 337 RRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRIS 396
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L +EM R D+ Y++++ +L + ++ A+ L+ +++++ I + TY +
Sbjct: 397 DAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILV 456
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ L+ +Y ++ + + +++ C D L+L + D G
Sbjct: 457 DGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCI 516
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE--ASYRMLQRY 466
P + LV L + ++A + ++M+V+ V +S ML Y
Sbjct: 517 PDAVTYETLVRALFENDKNDKAVKLLREMIVQGSAVGSNISSNSMLCVY 565
>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
Length = 948
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 13/388 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS NV G L A S + +E + P A L L + FD W+
Sbjct: 121 SSKFTPNVFGVLIIAFSE-MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 125 LMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEF 181
+ + + P+++T ++ R F + FD M E++IF + +
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFL---KAFRLFDEMIEKKIFPTVVIY----- 231
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+L++ C + + EA S+F + S PN T N ++ G+ + V Y EM+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+VVT+ I IDG CK A + +M +P++ LI G N+ +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L E+ K + PD+ Y+ +I L + A L+ EM++K + VTY+T+
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K +E ++ +M E P T L+ +C +++ + L+ ++ +G P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
A L+ G G +EAF K+M
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 160/399 (40%), Gaps = 56/399 (14%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+ALE F + P + +H+L + + +A LM + + +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQC-----------L 100
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
SR S+ R+E KF F VL+ AF ++EA V+ K+
Sbjct: 101 QNSRRSRICC--SVFNVLSRLESS------KFTPNVFGVLIIAFSEMGLVEEALWVYYKM 152
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P + N++L G + G M Y +MV RG P+VVTY IDG C++G F
Sbjct: 153 --DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A RLF+EM P++ T LI G I +A +F M + P++ YN M+
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG----------------- 367
+ + A+EL EM + + VT+ + GL K+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
++G CK L+ + + + +P T +L+K C R++ L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ +GF P+ + L+ G C G E+A E QM
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 140/329 (42%), Gaps = 9/329 (2%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
LKA F ++ F PT + + L +A E M R L L + +
Sbjct: 210 LKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGESRISEA-ESMFRTMRNSGMLPNLYTYN 267
Query: 144 IMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
M+ K ++ LE + M + + + FG +L+ C EM AR +
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFG-----ILIDGLCKTDEMVSARKFLI 322
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ S PN N L+ G+ ++G+++ + E+ P V TY+I I G C
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD 382
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A L +EM++ LP+ T TLI G N+ +A ++ +M ++ ++P+I ++
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + + AAM L EM K + D V Y + G K + +L+ M E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
P T+ L+ C + R+ + L+
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLF 531
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K ++ P + A N ++ L++ + ++ +M + + VTY T+ G +
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L+D MIE K P +L++ C R+ +++ + + G P+ + + ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 430 TGLCSRGRWEEAFECSKQML 449
G C ++A E ++ML
Sbjct: 271 DGYCKIAHVKKALELYQEML 290
>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Vitis vinifera]
Length = 748
Score = 122 bits (307), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 84/337 (24%), Positives = 154/337 (45%), Gaps = 8/337 (2%)
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
++ P+ T + ++L + K E L I GI G + L+
Sbjct: 315 QIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREM------ISEGIAPDGVI-YTTLIDG 367
Query: 188 FCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
FC + A +F ++ R +P+ T ++ G ++G V + +HEMV + P
Sbjct: 368 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 427
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VTY IDGYCK+G +A L +M ++ P++ T T L G + A +L
Sbjct: 428 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 487
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM ++ L+ +I YN++++ L + +++ A++LM +ME D VTY T+ KS
Sbjct: 488 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 547
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ +L +M++ + P T +LM FC++ ++ G L +++++G P+ +
Sbjct: 548 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 607
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L+ C R E + M + +Y +L
Sbjct: 608 SLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNIL 644
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 93/373 (24%), Positives = 166/373 (44%), Gaps = 13/373 (3%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
+ + P F+ +L D+A +L + + L+++ S ++ +S +S
Sbjct: 175 YKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKML-NYGLLISVDSCNLFISHLS----- 228
Query: 156 EETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAP 210
E L+ ++ ++FV + G + +N++ + C + EA + +++ L P
Sbjct: 229 -EDLDGI-KIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIP 286
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + + ++ G+ + G++ + EM ++G +P+ TYN I CK G +A R+
Sbjct: 287 DVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVL 346
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EM P TTLI G + N+ A +LFDEM KR + PD Y A+I L +
Sbjct: 347 REMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQT 406
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+ A +L EM KR+ D VTY + G K ++ L+++M++ P T
Sbjct: 407 GRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
L C VD L + +G + + + LV GLC G ++A + K M V
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526
Query: 451 RRRQVSEASYRML 463
+Y L
Sbjct: 527 AGFHPDAVTYTTL 539
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 2/293 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C ++ EA V +++S AP+ L+ GF + G+V++ + EM
Sbjct: 326 YNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQ 385
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P +TY I G C+ G +A +LF EM P T T LI G +
Sbjct: 386 KRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMK 445
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L ++M + L P+I Y A+ L +C +++ A EL+ EM K + + TY+++
Sbjct: 446 EAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLV 505
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ ++ KL M F P T LM +C + + L ++DR
Sbjct: 506 NGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQ 565
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQAN 471
P ++L+ G C G E+ + K ML + + +Y ++++Y ++ N
Sbjct: 566 PTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNN 618
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/324 (23%), Positives = 145/324 (44%), Gaps = 9/324 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSV 200
+ ++ K + FD M++ RK + + ++ C + EA +
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEMQK------RKISPDFITYTAVICGLCQTGRVMEADKL 415
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F +++ R P+ T L+ G+ + G + +++M+ G P++VTY DG CK
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A L EM R ++ T +L++G NI QA +L +M PD
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y ++ + + R++ A EL+ +M ++ + VT++ + G S LE KL M+
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E +P T L+K +C+ + ++ + +G P G+ ++L+ G C +
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
EA+ + M+ + ++ +SY L
Sbjct: 656 EAWFLHRDMVGKGFNLTVSSYNAL 679
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 3/211 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C +EM A + ++L R P T N+L+ GF SG + E M+
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TYN I YC + ++ M +P T LI G RN+
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M + + +YNA+I + + A EL ++M + + D Y+ +F
Sbjct: 656 EAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYN-IF 714
Query: 360 FGLMKSSG-LEGVCKLYDRMIEGKFVPKTRT 389
+ G +E +L D IE V +T
Sbjct: 715 ADINYDEGKMELTLELCDEAIEKCLVGDIQT 745
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 157/390 (40%), Gaps = 38/390 (9%)
Query: 14 PGISDRLALLFSTTTQSSEIERITR-IINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENV 72
P + + LL T + +E ER+ R +I++ PD ++ TL+ + +SS
Sbjct: 323 PYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAY---- 378
Query: 73 LGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFE--KTLHILARMRY------------ 118
RLF + +F +T T E K H + R
Sbjct: 379 --RLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436
Query: 119 -------FDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
+A+ L + + + P+++T +++ L + + + E L R E+
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV 228
+ +N L+ C + +A + + ++ F P+ T L+ + +S ++
Sbjct: 497 NI-------YTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 549
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+M+ R +P+VVT+N+ ++G+C G D +L + M +P+ T +L
Sbjct: 550 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSL 609
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I + N+ +++ M + + PD YN +I + R++ A L +M K
Sbjct: 610 IKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGF 669
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+Y+ + G K +L+++M
Sbjct: 670 NLTVSSYNALIKGFYKRKKFLEARELFEQM 699
>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
Length = 1636
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/396 (24%), Positives = 171/396 (43%), Gaps = 11/396 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQA-WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
F P ++ LH + + A W L V R P + S + +++ + K +E
Sbjct: 261 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP--DVVSYTTVINGLCKLDQVDE 318
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
D+M +R + +G+ L+ FC ++ A + K+ R + PN T
Sbjct: 319 ACRVMDKMIQRGCQPNVITYGT-----LVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 373
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ F D+ M+ G P + Y+ I G+CK G +A L E+M R
Sbjct: 374 NNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIR 433
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P + ++TLI I A++L + PD+ AY+ +I +L + + L
Sbjct: 434 RGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPE 493
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +D M + R D VTY+++ GL KS + L+DRM +P T +++
Sbjct: 494 AESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIH 553
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC + +D + + + P L+ GLC G ++AF+ ++ML
Sbjct: 554 SFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAP 613
Query: 456 SEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+ +Y L L + N E+ ++ +++ Q+ P
Sbjct: 614 NLVTYNTLIDGLCKINKVEQAAEMLEIMRK-QSCTP 648
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 169/398 (42%), Gaps = 13/398 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH-VQR-THPSLLTLKSMSIMLSRISKFQSYEET 158
P ++ ++ L ++ D+A +M +QR P+++T ++ R+ E
Sbjct: 298 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 357
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNI 217
+ ER G R + +N ++ FC + +M+ A V ++ P + +
Sbjct: 358 VRKM--TER----GYRP-NAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYST 410
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ GF ++G + +M+ RG RP V + ID CK A L +
Sbjct: 411 IISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMD 470
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + + LIH + + +A D M K PD+ YN+++ L + R +N A
Sbjct: 471 CAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAF 530
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L D M + D VTY + K + L+ K+ +RM E K VP T L+
Sbjct: 531 LLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGL 590
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C VD +++ ++ G P+ + L+ GLC + E+A E + M +
Sbjct: 591 CKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDS 650
Query: 458 ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
+Y L L A+ +LE+ R+++ ++ P R
Sbjct: 651 ITYTCLINGLCNAS---RLEEAWRVLREMKDKGCLPDR 685
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 111/480 (23%), Positives = 207/480 (43%), Gaps = 27/480 (5%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSS 66
L+R D++ G +++L ERI + +D +Q L L ++ Q +P
Sbjct: 51 LRRVDRWVGSDSPISVL----------ERIVQGASD----EQALRVALDEYRGQLSP--- 93
Query: 67 TLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
+V VL RL + AL FF++ + L++L + + QA +L
Sbjct: 94 EIVGKVLQRLIDPGA----ALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLF 149
Query: 127 SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
T+ + S ++S + E FD M R+ G++ ++L +
Sbjct: 150 RSRIEGQWGGDTV-TYSTLISGFIRAGKILPAYELFDEMNRK---GLKAHAGVHKSIL-R 204
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C + +A F ++ P++ T N ++ G +S + EMV GF P+
Sbjct: 205 GLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPN 264
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
V +YN + G+CK +A+ L E+M C P + + TT+I+G + + +A ++ D
Sbjct: 265 VFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMD 324
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M +R +P++ Y ++ R DL+ A+EL+ +M E+ + +TY+ + + +
Sbjct: 325 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRN 384
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+E ++ MI+ P ++ FC ++ +L +I RG P L
Sbjct: 385 DMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLS 444
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED-LDRMIKN 485
L+ LC + A E + + +Y +L L +A + E LD M+KN
Sbjct: 445 TLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKN 504
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/411 (23%), Positives = 175/411 (42%), Gaps = 38/411 (9%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFT-----LQHPHFTP------------------ 101
+ L V+G++ NG AL FF + H +T
Sbjct: 806 TGKLTTTVVGKVLQGVRNGDAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRPKDALQ 865
Query: 102 --------TPDAFEKTL--HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
+P+ F T+ H L R A+EL+ + R H + ++++ +
Sbjct: 866 VYRNKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPR-HGVPQNVILHNVVIKGLCS 924
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
+ + LE F ME F ++ ++ + ++ +A + ++S+ +P
Sbjct: 925 ARKLDSALELFKEMEESGSCPPDVF---TYSTIVDSLVKSGKVDDACRLVEDMVSKGCSP 981
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T + LL G ++G + M G P++VTYN IDG+CK G +A L
Sbjct: 982 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 1041
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EEM C P++ T T L+ A L + M ++ P++ YN+++ +
Sbjct: 1042 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKK 1101
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
++ A +L+ M +K + V+Y+T+ GL K++ + L ++M+ VP T
Sbjct: 1102 DEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 1161
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ C +RVD+ L+ + + G P+ + LV GLC R+++A
Sbjct: 1162 NTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 1212
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 173/412 (41%), Gaps = 32/412 (7%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM---SIMLSRISK--- 151
+P + LH L + D+A L+ + R+ P+++T ++ L RI +
Sbjct: 980 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 1039
Query: 152 -------------FQSYEETLEAFDRMER-EIFVGIRKFGSEE--------FNVLLQAFC 189
+Y L+AF + + E +G+ + E+ +N LL FC
Sbjct: 1040 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 1099
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ E++ A + ++ + PN + N ++ G ++ V + +M+ P +V
Sbjct: 1100 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 1159
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+N ID CK A LF ++ C P+L T +L+HG R QA L EM
Sbjct: 1160 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 1219
Query: 309 P-KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
K+ PDI YN +I L + + ++ A +L +M + D+VTY + L K
Sbjct: 1220 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 1279
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
++ + + M++ F P T L+ FC +D L + L+ +G P +
Sbjct: 1280 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 1339
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ L RGR +A E + ML +Y L + A+ E DL
Sbjct: 1340 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDL 1391
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/496 (22%), Positives = 201/496 (40%), Gaps = 53/496 (10%)
Query: 32 EIERITRIINDHP-FPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAA-----HSNGLK 85
E R+ R + D PD+ + TLL+ L +T L LVE +L + A ++NG +
Sbjct: 668 EAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLE--LVEQLLKEMEATEEGQWNANGAR 725
Query: 86 ALEF------------------------FKFTLQHPHFTPTPDAFEKTL--------HIL 113
F Q F+P P + T H +
Sbjct: 726 LHRFVIRGDVLMMAMAVPMAALTSQTRVLDSKDQQGQFSPRPHQYRVTAVATQGGFHHKI 785
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
R+ AWE LT + +L + ++ + L FD +
Sbjct: 786 VRILNSRFAWEYAETALERFTGKLTTTVVGKVLQGV---RNGDAALGFFDWATSQ----- 837
Query: 174 RKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAM 231
+ + + N LLQA K K+A V+ L +PN T IL+ G +GD+
Sbjct: 838 EGYNHDTYTCNCLLQALLRLKRPKDALQVYRNKLC-CSPNMFTFTILIHGLCRAGDIGTA 896
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-ACLPSLQTITTLIH 290
EM G +V+ +N+ I G C A+ LF+EME +C P + T +T++
Sbjct: 897 YELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVD 956
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ A +L ++M + P++ Y++++ L + L+ A L+ M
Sbjct: 957 SLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 1016
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ VTY+T+ G K ++ L + M++G P T +L+ FC + + + L
Sbjct: 1017 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 1076
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
++++G+ P+ + L+ C + E A + M+ + + SY + L +A
Sbjct: 1077 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 1136
Query: 471 N-ANEKLEDLDRMIKN 485
+E + L++M+ N
Sbjct: 1137 TKVHEGVLLLEQMLSN 1152
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/376 (22%), Positives = 159/376 (42%), Gaps = 10/376 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
+ P + +H+ R ++A +++ + +T P + ++ IS F
Sbjct: 366 YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTI------ISGFCKAG 419
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTM 215
+ EA D +E+ I G R + L+ A C + A+ + + + AP+
Sbjct: 420 KLREAHDLLEQMIRRGCRP-DVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+IL+ ++ + E + MV P VVTYN +DG CK DA LF+ M
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P + T + +IH N+ A ++ + M + PD+ Y+A+I+ L + ++
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A ++ EM + VTY+T+ GL K + +E ++ + M + P + T L+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C R++ + + D+G P L+ L E + K+M
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEATEEGQ 718
Query: 456 SEASYRMLQRYLVQAN 471
A+ L R++++ +
Sbjct: 719 WNANGARLHRFVIRGD 734
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 112/272 (41%), Gaps = 3/272 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ A C + A +F + S PN T N L+ G +S E EM
Sbjct: 1161 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 1220
Query: 240 LR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G P ++TYN IDG CK A +LF +M P T + +I R +
Sbjct: 1221 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 1280
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A + + M K P Y +I + +L+ A+E++ + K D VT+
Sbjct: 1281 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 1340
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L +L + M+ VP T T L+K FC + ++L+ + G
Sbjct: 1341 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGC 1400
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF-ECSKQML 449
P LV L + +++ E SK M+
Sbjct: 1401 EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMV 1432
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 104/244 (42%), Gaps = 6/244 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A E F +Q TP + +H L + R FDQA L+ + R + + + +
Sbjct: 1177 AYELFNL-IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 1235
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + K + + + F +M + +++++ + C + M EA +V +L
Sbjct: 1236 IDGLCKSKRVDRAYKLFLQMLSDGLAP----DDVTYSIVISSLCKWRFMDEANNVLELML 1291
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
F P T L+ GF ++G++ ++ +G P VVT++I ID K+G
Sbjct: 1292 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 1351
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A L E M R +P T TL+ G A LF+ M + +PD Y ++
Sbjct: 1352 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLV 1411
Query: 325 SSLI 328
L+
Sbjct: 1412 GHLV 1415
>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 94/352 (26%), Positives = 156/352 (44%), Gaps = 11/352 (3%)
Query: 101 PTPDAFEKTLHILARM-RYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEE 157
P F K L + +M +Y+ L ++ P + TL SI++ S Q +
Sbjct: 92 PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL---SILIDCFSHLQRVDL 148
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMN 216
F +M I +G++ + FN L+ C + +A F S P T
Sbjct: 149 AFSVFSKM---IKLGLQP-DAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYT 204
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G + G+ TA + +M G +P+VVTYNI ID CK +A+ +F M+
Sbjct: 205 TIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAK 264
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T +LI G R +A L +EM N+ P+I +N ++ ++ + ++ A
Sbjct: 265 RISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEA 324
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ M E + D VTY ++ +G + KL+D MI P + +L+K
Sbjct: 325 QGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKG 384
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+C R+D L+ +I +G P + L+ GLC GR EA + K M
Sbjct: 385 YCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNM 436
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 105/412 (25%), Positives = 180/412 (43%), Gaps = 57/412 (13%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
PDA F ++ L ++ F QA E + + P++ T ++ L +I E T
Sbjct: 163 PDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIG-----ETT 217
Query: 159 LEA--FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
A F +ME G + +N+L+ + C K + EA +F + + R +P+ T
Sbjct: 218 AAAGLFKKMEE---AGCQP-NVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTY 273
Query: 216 NILLLG---FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
N L+ G F+ + +A+ +EM P++ T+N+ +D CK+G +A +F+
Sbjct: 274 NSLIQGLCNFRRWKEASAL---LNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKT 330
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M + P + T ++L++G L I +AR+LFD M + KPD +YN +I + +
Sbjct: 331 MTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKR 390
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A +L +EM + + DNV Y+T+ GL + L L+ M +P T M
Sbjct: 391 IDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNLPDLFTYSM 450
Query: 393 LMKFFCVN---------FRV--------DLGL------------------NLWGYLIDRG 417
L+ FC FRV D+ + L+ L +G
Sbjct: 451 LLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQG 510
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P+ ++ LC G +EA E + M E SY ++ R +Q
Sbjct: 511 LLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQ 562
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/368 (24%), Positives = 159/368 (43%), Gaps = 43/368 (11%)
Query: 150 SKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LS 206
S F++ ++ L +F+ M RE I +F LL A + A K L+
Sbjct: 70 SSFRNIDDALASFNHMLHREPLPCII-----QFTKLLSAIVKMGQYYGAVISLSKQMELA 124
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+P+ T++IL+ F V + +M+ G +P VT+N I+G CK G F A
Sbjct: 125 GLSPDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQA 184
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ F++ E C P++ T TT+I+G + A LF +M + +P++ YN +I S
Sbjct: 185 VEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDS 244
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM------KSSGL------------ 368
L + + +N A+++ M+ KRI D TY+++ GL ++S L
Sbjct: 245 LCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPN 304
Query: 369 --------EGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
+ +CK ++ M E P T LM + + + L+
Sbjct: 305 IFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFD 364
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+I +G P + ++L+ G C R +EA + +M+ + +Y L L Q
Sbjct: 365 AMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLG 424
Query: 472 ANEKLEDL 479
+ +DL
Sbjct: 425 RLREAQDL 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 1/212 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++ +C K + EA+ +F +++ + P+N N L+ G + G + + + M
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P + TY++ +DG+CK+G G A RLF M+ P + LI N+
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+LF E+ + L P++ Y +I++L + L+ A+E ME D +Y+ +
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
G ++ +L M + FV + T
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGFVAEAGTTT 589
>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
Length = 975
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 153/343 (44%), Gaps = 8/343 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P + L+++ + A EL+ ++ + L +K SI++ + K S +
Sbjct: 324 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKHGSLDNAFN 382
Query: 161 AFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
F+ ME + I I + N+L+ FC + + ++ R PN T ++L
Sbjct: 383 LFNEMEMKGITTNIITY-----NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 437
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ F + G + E + EM+ RG P +TY IDG+CK+ A ++ + M C
Sbjct: 438 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 497
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+++T LI+G I +LF +M R + D YN +I LN A E
Sbjct: 498 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 557
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L EM +++ + VTY + GL + E ++++++ + K +++ C
Sbjct: 558 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 617
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+VD +L+ L +G P ++++ GLC +G EA
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 660
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 178/426 (41%), Gaps = 42/426 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F+ + H PT F + +A+ + +D L ++ + L ++SIM
Sbjct: 170 AIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIM 227
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
I+ F + AF M + I +G + F+ L+ C + + EA + +++
Sbjct: 228 ---INCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMV 283
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY-------------- 250
P+ T+N L+ G SG + +MV G +P+ VTY
Sbjct: 284 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 343
Query: 251 ---------------------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+I IDG CK G +A LF EME ++ T LI
Sbjct: 344 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 403
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G +L +M KR + P++ ++ +I S ++ L A EL EM + I
Sbjct: 404 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 463
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D +TY ++ G K + L+ ++ D M+ P RT +L+ +C R+D GL L
Sbjct: 464 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + RG + L+ G C G+ A E ++M+ R+ + +Y++L L
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583
Query: 470 ANANEK 475
+EK
Sbjct: 584 NGESEK 589
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 97/215 (45%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ +C + + +F K+ L + T N L+ GF E G + + + EMV
Sbjct: 504 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 563
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P++VTY I +DG C G A+ +FE++E+ + +IHG +
Sbjct: 564 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 623
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP + YN MI L + L+ A L +MEE D TY+ +
Sbjct: 624 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 683
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ KL + + F T+ M++
Sbjct: 684 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 718
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 127/264 (48%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+I++ G + G + ++EM ++G +++TYNI I G+C G + D +L +M +
Sbjct: 365 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 424
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T + LI + +A +L EM R + PD Y ++I + L+
Sbjct: 425 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 484
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +++D M K + T++ + G K++ ++ +L+ +M V T T L++
Sbjct: 485 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 544
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC ++++ L+ ++ R P+ +L+ GLC G E+A E +++ + ++
Sbjct: 545 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 604
Query: 456 SEASYRMLQRYLVQANANEKLEDL 479
Y ++ + A+ + DL
Sbjct: 605 DIGIYNIIIHGMCNASKVDDAWDL 628
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 128/281 (45%), Gaps = 9/281 (3%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
R+ D A L ++R +P+++T S+++ K E E M I GI
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTF---SVLIDSFVKEGKLREAEELHKEM---IHRGIAP 464
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMF 234
+ + L+ FC + + +A + ++S+ PN +T NIL+ G+ ++ +
Sbjct: 465 -DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 523
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +M LRG VTYN I G+C+ G A LF+EM P++ T L+ G
Sbjct: 524 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 583
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+A ++F+++ K ++ DIG YN +I + ++ A +L + K + T
Sbjct: 584 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 643
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
Y+ M GL K L L+ +M E P T +L++
Sbjct: 644 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 684
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF +M LP++ + L + L +M + + ++ + MI
Sbjct: 169 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 228
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RCR L A M ++ + + +T+ T+ GL + +L DRM+E
Sbjct: 229 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 288
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T+ L+ C++ + + L +++ G P+ ++ +C G+ A E
Sbjct: 289 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 348
Query: 445 SKQMLVRRRQVSEASYRML 463
++M R ++ Y ++
Sbjct: 349 LRKMEERNIKLDAVKYSII 367
>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g16640, mitochondrial; Flags: Precursor
gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 504
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 96/362 (26%), Positives = 167/362 (46%), Gaps = 6/362 (1%)
Query: 115 RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
R D + +L H+ + P L ++ S +LS ISK + Y+ + +++M+ +GI
Sbjct: 58 RFMKLDDSLDLFFHMVQCRP-LPSIADFSRLLSAISKMKKYDVVIYLWEQMQ---MLGI- 112
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEM 233
N+LL FC ++ A S K++ P+ T LL GF V
Sbjct: 113 PHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALY 172
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ +MV G++P+VV YN IDG CK +A+ L ME+ P + T +LI G
Sbjct: 173 MFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLC 232
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
A ++ M KR + PD+ +NA+I + ++ ++ A E +EM + + D V
Sbjct: 233 SSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIV 292
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + +GL S L+ +++ M+ P T +L+ +C + +V+ G+ L+ +
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
RG + +L+ G C G+ A E ++M+ + +Y +L L
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKI 412
Query: 474 EK 475
EK
Sbjct: 413 EK 414
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 173/411 (42%), Gaps = 23/411 (5%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WELMSHVQRTHPSLLTLKSMSIM 145
FF P P+ F + L +++M+ +D WE M + H L + +I+
Sbjct: 69 FFHMVQCRP--LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH----NLCTCNIL 122
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF 201
L+ + L +M K G E F LL FC + +A +F
Sbjct: 123 LNCFCRCSQLSLALSFLGKM--------IKLGHEPSIVTFGSLLNGFCRGDRVYDALYMF 174
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++ + PN N ++ G +S V + M G P VVTYN I G C
Sbjct: 175 DQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSS 234
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G + DA R+ M + P + T LI + +A + ++EM +R+L PDI Y
Sbjct: 235 GRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTY 294
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ +I L L+ A E+ M K D VTY + G KS +E KL+ M +
Sbjct: 295 SLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
V T T +L++ +C ++++ ++ ++ G P+ ++L+ GLC G+ E+
Sbjct: 355 RGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEK 414
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
A M +Y ++ R + +A D+ + N Q ++P
Sbjct: 415 ALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL-NCQGLMP 464
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/321 (22%), Positives = 130/321 (40%), Gaps = 35/321 (10%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYE 156
+ P + + L + + D A +L++ +++ P ++T S+ L ++
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241
Query: 157 ETLEAFDRMEREIFVGIRKFGS--------------EEF----------------NVLLQ 186
+ + REI+ + F + EEF ++L+
Sbjct: 242 RMVSCMTK--REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIY 299
Query: 187 AFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + EA +F ++S+ P+ T +IL+ G+ +S V + EM RG
Sbjct: 300 GLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVR 359
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ VTY I I GYC+ G A +F M P++ T L+HG I +A +
Sbjct: 360 NTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVIL 419
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+M K + DI YN +I + + ++ A ++ + + + D TY TM GL K
Sbjct: 420 ADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKK 479
Query: 366 SGLEGVCKLYDRMIEGKFVPK 386
L+ +M E +P
Sbjct: 480 GLRREADALFRKMKEDGILPN 500
>gi|449435037|ref|XP_004135302.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Cucumis sativus]
Length = 519
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 108/465 (23%), Positives = 208/465 (44%), Gaps = 19/465 (4%)
Query: 29 QSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALE 88
+ S+I+ I + D+ L + + LS LV +L R + AL
Sbjct: 67 KKSDIDFIIAKVQVGSSEDEVFQSLLQDPVCNSIQLSHDLVYKLLQRF---KDDWKSALG 123
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
F++ F TPD ++ + L + + + ++ ++ L+TL +++ + R
Sbjct: 124 VFRWAESLSGFKHTPDLYDILIDTLGKTKQLVKMRGMLEEMKEAR--LVTLDTVAKAMRR 181
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF 208
+ +E + FD +E G+ K +E NVLL C +K++++AR ++++L S
Sbjct: 182 FAGAGQWENAVRIFDDLET---YGLEK-NTESMNVLLDTLCKEKKVEKARQMYLELKSHI 237
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
APN T N+ + G+ + + EM G RP V++Y+ I YC + F
Sbjct: 238 APNANTFNMFIHGWCKVNKIDEAHWTLEEMKGYGHRPCVISYSTIILFYCHRCNFNKVYE 297
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L +EM+ C ++ T TT++ +A Q+ + M +PD YN +I +L
Sbjct: 298 LLDEMDAQGCPANVITYTTIMCSLTKSEEFEEALQIAERMKSAGYEPDTLFYNCLIHTLG 357
Query: 329 RCRDLNAAMELMD-EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PK 386
R + A+ + + EM K + + TY++M + + E KL + M + + P
Sbjct: 358 RAGKVREAIHVFEVEMPSKSVLPNTSTYNSMIAMYCRRAREEKAMKLLEEMQKSEHCKPD 417
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD-----LLVTGLCSRGRWEEA 441
+T L+K + D L+ L+D H +LD LL+ GLC + + A
Sbjct: 418 VQTYYPLLKSCFRTGKTDYDLS---NLLDEMINKHHLSLDISTYSLLIHGLCRANKCDWA 474
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
++ ++M+ + + + ++L Q N + + ++ ++K L
Sbjct: 475 YQLFEKMISQDIKPRYLTCQLLLDEFKQKNMDGVADRIEGIMKKL 519
>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
Length = 487
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 93/358 (25%), Positives = 165/358 (46%), Gaps = 14/358 (3%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK----SMSIMLSRISK 151
H H P F+K L L R++++ L ++ LL ++ +I+++ S+
Sbjct: 77 HKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIE-----LLRIERDVFHFNILINCFSR 131
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAP 210
Q + AF + + I +G + F+ L+ C + + A F +++ S + P
Sbjct: 132 LQRVDF---AFSVLGKIIKLGFEP-DAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQP 187
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T N ++ GF + G T +M G RP +V YN IDG CK +A+ +F
Sbjct: 188 NLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIF 247
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E++ P + T + L+HG +A LF+EM N+ PD+ +N ++ L +
Sbjct: 248 SEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKE 307
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
L+ A ++ M EK + + TY+++ G + + ++D MI +P +
Sbjct: 308 GMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSY 367
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+L+ +C R+D L+ + RG P+ + L++GLC GR EA E K M
Sbjct: 368 NILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDM 425
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 100/374 (26%), Positives = 169/374 (45%), Gaps = 21/374 (5%)
Query: 127 SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE-----AFDRMEREIFVGIRKFGSEEF 181
+H+ HP L + +LS + + + Y L R+ER++F F
Sbjct: 73 NHMIHKHP-LPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVF---------HF 122
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFK-ESGDVTAMEMFYHEMV 239
N+L+ F + + A SV K++ F P+ T + L+ G E AME F+ EMV
Sbjct: 123 NILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAME-FFDEMV 181
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G++P++ TYN I G+CK G A+ L ++M++ P + T+I G R +
Sbjct: 182 ASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVS 241
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F E+ + ++PD+ Y+ ++ L A L +EM I D VT++ +
Sbjct: 242 EALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILV 301
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K L + MIE P T LM +C+ +V ++ +I +G
Sbjct: 302 DKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCM 361
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + ++L+ G C R +EA E +M R + +Y L L QA + + +L
Sbjct: 362 PNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEAREL 421
Query: 480 DRMIKNLQAVLPPP 493
K++QA P
Sbjct: 422 ---FKDMQAQGCSP 432
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 151/329 (45%), Gaps = 18/329 (5%)
Query: 77 FAAHSNGL-------KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
F++ NGL +A+EFF + + P + + ++ A L+ +
Sbjct: 157 FSSLINGLCFEDKFARAMEFFD-EMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215
Query: 130 QRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
+ P ++ ++ + + K + E L+ F ++ + G+R +++L+
Sbjct: 216 DKAGGRPDIVIYNTI---IDGLCKDRLVSEALDIFSEIKGK---GVRP-DVFTYSILMHG 268
Query: 188 FCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C + +EA ++F +++S P+ T NIL+ + G ++ + M+ +G P+
Sbjct: 269 LCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPN 328
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
TYN ++GYC + +A +F+ M C+P++ + LI+G + I +AR+LFD
Sbjct: 329 YATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFD 388
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R L P+ YN +IS L + A EL +M+ + D VT + L K
Sbjct: 389 EMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLG 448
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
L+ +L+ M + P T +L++
Sbjct: 449 YLDNALRLFRAMQDSCLKPNLVTYDILIR 477
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 120/270 (44%), Gaps = 12/270 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + + L + R +A ++ S ++ P + T SI++ + EE
Sbjct: 222 PDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTY---SILMHGLCNSDQKEEA 278
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
F+ M I + FN+L+ C + + EA+ + ++ + PN T N
Sbjct: 279 SALFNEMMSLNIMPDV-----VTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYN 333
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G+ V M + M+ +G P+VV+YNI I+GYCK +A LF+EM
Sbjct: 334 SLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFR 393
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P+ TLI G +AR+LF +M + PD+ ++ SL + L+ A
Sbjct: 394 GLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNA 453
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+ L M++ + + VTY + + KS
Sbjct: 454 LRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/152 (19%), Positives = 65/152 (42%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
NI A F+ M ++ P I ++ ++S+L+R + + L +E RI D ++
Sbjct: 64 NIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFN 123
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ + ++ + ++I+ F P T L+ C + + + ++
Sbjct: 124 ILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVAS 183
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G+ P+ H + ++ G C G+ A K+M
Sbjct: 184 GYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKM 215
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/207 (19%), Positives = 85/207 (41%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ M+ + P +V ++ + + +G + L + +E + + LI+
Sbjct: 72 FNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSR 131
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
++ + A + ++ K +PD ++++I+ L AME DEM + T
Sbjct: 132 LQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHT 191
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ G K L +M + P ++ C + V L+++ +
Sbjct: 192 YNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIK 251
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEA 441
+G P +L+ GLC+ + EEA
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEA 278
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 47/229 (20%), Positives = 93/229 (40%), Gaps = 12/229 (5%)
Query: 259 KKGC----FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--- 311
+KGC DA+ F M LP + L+ + LVR H L + KR
Sbjct: 57 QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLL--SALVRIKHYGTVL--SLSKRIEL 112
Query: 312 -NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
++ D+ +N +I+ R + ++ A ++ ++ + D VT+ ++ GL
Sbjct: 113 LRIERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFAR 172
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+ +D M+ + P T ++K FC + + + L + G P + ++
Sbjct: 173 AMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIID 232
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
GLC EA + ++ + + +Y +L L ++ E+ L
Sbjct: 233 GLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASAL 281
>gi|413952128|gb|AFW84777.1| hypothetical protein ZEAMMB73_772209 [Zea mays]
Length = 519
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 155/354 (43%), Gaps = 10/354 (2%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
P + P A L ILA+ R FD A L+ ++R S + ++ +++ R +
Sbjct: 129 QPGYAPGRRACHSMLDILAKHRRFDAARALLDEMRRA--STASPAAVLLLVRRHCAARDV 186
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ AF + F G+ EF+ LL A C K +++A ++ + F K+
Sbjct: 187 AGAVAAFRALPSFGF----HTGAAEFHGLLSALCRYKNVQDAENLLISWQKEFPFETKSF 242
Query: 216 NILLLGFKE-SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NI+L G+ V + F+ M +G V++Y I + K G M+LF M
Sbjct: 243 NIVLNGWCNIVCSVREAKRFWSSMERKGIARDVLSYGSMISCFSKAGSLDSVMKLFNRMN 302
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P + ++ R + +A+ L M ++ + PD +N++I L + R
Sbjct: 303 EAGVAPDRKVYNAIVFALAKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQ 362
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
AME+ D M ++++ T+H + S+ V L D+M + + P+ T +ML+
Sbjct: 363 EAMEMFDAMLQRKLSPSVRTFHALLNVARNST---EVFDLLDKMKQLRCEPEMDTYIMLI 419
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ FC + LW + G P A +L+ GL GR EEA ++M
Sbjct: 420 RKFCRWREHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEEAARYYEEM 473
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 13/295 (4%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ-SYEETLEAFDR 164
F L L R + A L+ Q+ P KS +I+L+ S E +
Sbjct: 208 FHGLLSALCRYKNVQDAENLLISWQKEFP--FETKSFNIVLNGWCNIVCSVREAKRFWSS 265
Query: 165 MERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGF 222
MER+ I + +GS ++ F + +F ++ + AP+ K N ++
Sbjct: 266 MERKGIARDVLSYGS-----MISCFSKAGSLDSVMKLFNRMNEAGVAPDRKVYNAIVFAL 320
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ V +M M + P T+N I CK F +AM +F+ M + PS+
Sbjct: 321 AKGRCVKEAKMLVRSMEEKQVAPDTATFNSLIGPLCKARQFQEAMEMFDAMLQRKLSPSV 380
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+T L++ + RN + L D+M + +P++ Y +I R R+ + +L
Sbjct: 381 RTFHALLN---VARNSTEVFDLLDKMKQLRCEPEMDTYIMLIRKFCRWREHESVEKLWSA 437
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
M + D Y + GL + LE + Y+ M F+P+ +T M+M +
Sbjct: 438 MPANGLSPDRSAYIVLIHGLFLNGRLEEAARYYEEMKSKGFLPEKKTEEMVMAWL 492
>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63080, mitochondrial; Flags: Precursor
gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 614
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 143/301 (47%), Gaps = 5/301 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + K++ ++ L F M+ + GIR ++ L+ C +A +
Sbjct: 244 STVIDSLCKYRHVDDALNLFTEMDNK---GIRP-DVFTYSSLISCLCNYGRWSDASRLLS 299
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+L R PN T N L+ F + G + E + EM+ R P++VTYN I+G+C
Sbjct: 300 DMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHD 359
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A ++F M CLP + T TLI+G + + +LF +M +R L + Y
Sbjct: 360 RLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYT 419
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + D + A + +M + + +TY+T+ GL K+ LE +++ + +
Sbjct: 420 TLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKS 479
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K P T ++ + C +V+ G +L+ L +G P A + +++G C +G EEA
Sbjct: 480 KMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEA 539
Query: 442 F 442
+
Sbjct: 540 Y 540
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 174/393 (44%), Gaps = 17/393 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WELMSHVQRTHPSLLTLKS 141
+A++ F ++ F P+ F K L +A+M+ FD E M + +H L +
Sbjct: 48 EAVDLFGEMVKSRPF-PSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSH----NLYT 102
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARS 199
+IM++ + + L +M + +G N LL FC + EA +
Sbjct: 103 YNIMINCLCRRSQLSFALAILGKMMK------LGYGPSIVTLNSLLNGFCHGNRISEAVA 156
Query: 200 VFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ +++ + P+ T L+ G + + MV++G +P +VTY I+G C
Sbjct: 157 LVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLC 216
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G A+ L +ME+ + +T+I R++ A LF EM + ++PD+
Sbjct: 217 KRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVF 276
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y+++IS L + A L+ +M E++I + VT++++ K L KL+D M
Sbjct: 277 TYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 336
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
I+ P T L+ FC++ R+D ++ ++ + P + L+ G C +
Sbjct: 337 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKV 396
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ E + M R + +Y L QA+
Sbjct: 397 VDGMELFRDMSRRGLVGNTVTYTTLIHGFFQAS 429
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 77/352 (21%), Positives = 168/352 (47%), Gaps = 12/352 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+ P F +H L + +A L+ V+ P L+T ++ ++ + K +
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAV---INGLCKRGEPD 222
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L ++ME+ G + ++ ++ + C + + +A ++F ++ ++ P+ T
Sbjct: 223 LALNLLNKMEK----GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTY 278
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ G + +M+ R P+VVT+N ID + K+G +A +LF+EM +
Sbjct: 279 SSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQ 338
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ P++ T +LI+G + + +A+Q+F M ++ PD+ YN +I+ + + +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVD 398
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
MEL +M + + + VTY T+ G ++S + ++ +M+ P T L+
Sbjct: 399 GMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLD 458
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE--CS 445
C N +++ + ++ YL P + +++ G+C G+ E+ ++ CS
Sbjct: 459 GLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCS 510
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 135/328 (41%), Gaps = 45/328 (13%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L + R+ D A L + + P + T S+ L ++ L D
Sbjct: 243 YSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS--D 300
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ER+I + F N L+ AF + ++ EA +F +++ R PN T N L+ GF
Sbjct: 301 MLERKINPNVVTF-----NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ + + MV + P VVTYN I+G+CK D M LF +M R + +
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415
Query: 283 QTITTLIHG---------------------------------AGLVRN--IHQARQLFDE 307
T TTLIHG GL +N + +A +F+
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
+ K ++PDI YN M + + + +L + K + D + Y+TM G K
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
E L+ +M E +P + T L++
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIR 563
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 21/296 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMS---IMLSRISKFQS 154
F DAF K ++ + FD+ +QR+ P+++T S+ M R+ + Q
Sbjct: 313 FNSLIDAFAKEGKLIEAEKLFDEM------IQRSIDPNIVTYNSLINGFCMHDRLDEAQQ 366
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+ + D + + +N L+ FC K++ + +F + R N
Sbjct: 367 IFTLMVSKDCLPDVV----------TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTV 416
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ GF ++ D +M + +MV G P+++TYN +DG CK G AM +FE +
Sbjct: 417 TYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL 476
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
++ P + T + G + LF + + +KPD+ AYN MIS +
Sbjct: 477 QKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLK 536
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A L +M+E D+ TY+T+ ++ +L M +F T
Sbjct: 537 EEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDAST 592
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 111/246 (45%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ EM +G RP V TY+ I C G + DA RL +M P++ T +LI
Sbjct: 262 LFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFA 321
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ +A +LFDEM +R++ P+I YN++I+ L+ A ++ M K D V
Sbjct: 322 KEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVV 381
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ G K+ + +L+ M V T T L+ F D ++ +
Sbjct: 382 TYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQM 441
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ G P+ + L+ GLC G+ E+A + + + + +Y ++ + +A
Sbjct: 442 VSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKV 501
Query: 474 EKLEDL 479
E DL
Sbjct: 502 EDGWDL 507
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 75/163 (46%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A LF EM K P I ++ ++S++ + + + + ++ME + H+ TY+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M L + S L + +M++ + P T+ L+ FC R+ + L +++ G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ P LV GL + EA ++M+V+ Q +Y
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 208
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 91/217 (41%), Gaps = 12/217 (5%)
Query: 240 LRGFRPSVVTYNIRIDGYCKKGC--------FGDAMRLFEEMERVACLPSLQTITTLIHG 291
LRG S ++Y DGY +K +A+ LF EM + PS+ + L+
Sbjct: 19 LRGIYFSGLSY----DGYREKLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSA 74
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ ++M + ++ YN MI+ L R L+ A+ ++ +M + G
Sbjct: 75 IAKMKKFDLVISFGEKMEILGVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPS 134
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
VT +++ G + + L D+M+E + P T T L+ + + + L
Sbjct: 135 IVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVE 194
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ +G P ++ GLC RG + A +M
Sbjct: 195 RMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231
>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
Length = 500
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 98/375 (26%), Positives = 166/375 (44%), Gaps = 10/375 (2%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-VQRTHPS 135
FA +N KA E ++ ++ + P ++ +H LA++ D++ +++S V R
Sbjct: 55 FARSNNMEKAREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTP 113
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
++++ S ++ ++K + + FD M R G F L+ C ++K
Sbjct: 114 --SMQAYSSLVRALAKARRVDHASSLFDEMIR----GGHHPDRLMFYELILGLCQAGKVK 167
Query: 196 EARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+A F ++ PN N+LL G SG + + EM P VVTYN +
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D CK + +LFE M +P++ T +TLIHG + +A ++F M + K
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P+ Y +IS L R + A EL ++M + I D V Y+++ G K ++ KL
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 347
Query: 375 YDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
Y M G + P T L+ FC ++ L + +G +L+ GL
Sbjct: 348 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLS 407
Query: 434 SRGRWEEAFECSKQM 448
+ +EA E KQM
Sbjct: 408 RATKLDEALEVYKQM 422
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 93/381 (24%), Positives = 161/381 (42%), Gaps = 46/381 (12%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEE 157
TP+ A+ + LA+ R D A L + R HP L + + L + K + E
Sbjct: 112 TPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASE 171
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ + + V + +NVLL C+ ++++A ++F ++ S +P+ T N
Sbjct: 172 RFKQMPKHGCQPNVPV-------YNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYN 224
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL ++ V + M G+ P+V+T++ I G C+ G A+ +F M
Sbjct: 225 TLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEA 284
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR------- 329
C P+ T TTLI G + QAR+LF++M + + PD AYN++I+ +
Sbjct: 285 GCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEA 344
Query: 330 ---------------------------CR--DLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
C+ L A EL+ EM K + D+ TY +
Sbjct: 345 EKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIA 404
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL +++ L+ ++Y +M E KF+ + V + C +D ++ G P
Sbjct: 405 GLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVP 464
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ +L L GR E+A
Sbjct: 465 NPETFRILSESLIKLGRVEDA 485
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 127/269 (47%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++Q F M++AR V+ ++ S + P+N + +IL+ G + G + EMV
Sbjct: 48 FNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMV 107
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+RG PS+ Y+ + K A LF+EM R P LI G +
Sbjct: 108 MRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVK 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + F +MPK +P++ YN ++ L L A L EM+ D VTY+T+
Sbjct: 168 DASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLL 227
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ K+ +E CKL++ M +VP T L+ C ++ L ++G +++ G
Sbjct: 228 DAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 287
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ + L++GLC + +A E ++M
Sbjct: 288 PNKYTYTTLISGLCRAEKVIQARELFEKM 316
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 90/201 (44%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+ +V TY+ I K+ ++ ++ EEM C P + ++ G N+ +
Sbjct: 4 KNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEK 63
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+++ M + KPD +Y+ +I L + L+ +++++ EM + Y ++
Sbjct: 64 AREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVR 123
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K+ ++ L+D MI G P L+ C +V + + G P
Sbjct: 124 ALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQP 183
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ ++L+ GLCS G+ E+A
Sbjct: 184 NVPVYNVLLHGLCSSGQLEQA 204
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 67/176 (38%), Gaps = 35/176 (19%)
Query: 308 MPKRNLKPDIGAYNAMISSLI-----------------------------------RCRD 332
M +N+ ++ Y+++I SL+ R +
Sbjct: 1 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A E+ M E DNV+YH + GL K L+ K+ M+ P +
Sbjct: 61 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSS 120
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L++ RVD +L+ +I G P L+ GLC G+ ++A E KQM
Sbjct: 121 LVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQM 176
>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
Length = 590
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/384 (24%), Positives = 164/384 (42%), Gaps = 11/384 (2%)
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLK 140
G A E F ++ P A L + + ++AW L + + R S++T
Sbjct: 137 GDDAFECFDM-MKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFN 195
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
M +L + K + +E + + + GI+ +N ++ +C++ ++ AR +
Sbjct: 196 IMINVLCKEGKLKKAKEFIGLMEAL------GIKP-NVVTYNTIIHGYCSRGRVEGARMI 248
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F + R P++ T + G + G + +M G RP+ VTYN IDGYC
Sbjct: 249 FDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCN 308
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
KG A ++M R +P++ T LIH L + +A + EM ++ L PD
Sbjct: 309 KGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVT 368
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I+ RC ++ A L DEM K I VTY ++ + L K ++ L+++++
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIV 428
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P L+ C N +D + + P + L+ G C G+ E
Sbjct: 429 RKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
A E ++M R + SY L
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTL 512
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 178/403 (44%), Gaps = 24/403 (5%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS--- 150
++H TP L L + D A++ ++H+ L +KS + ++ IS
Sbjct: 28 IKHLAHKITPSLISTALTSLHKTP--DLAFQFVTHIGFGD---LDIKSKCLAMAVISHAP 82
Query: 151 ----KFQSYEETLEAFDRMEREIF---------VGIRKFGSEEFNVLLQAFCTQKEMKEA 197
Q +ET+ + RE+F +GI+ + +++L++A C K +A
Sbjct: 83 NSKPSLQLLKETINSGVYSIREVFNELGVARGVLGIKTY--VLYDLLIRACCELKRGDDA 140
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
F + + P+ N +L F +S + Y EM + SVVT+NI I+
Sbjct: 141 FECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINV 200
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
CK+G A ME + P++ T T+IHG + AR +FD M R +KPD
Sbjct: 201 LCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPD 260
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y + IS + + L A ++++M+E + VTY+T+ G LE D
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M+ +P T ML+ ++ ++D + + ++G P ++L+ G C G
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++AF +M+ + Q + +Y L L + ++ +DL
Sbjct: 381 NVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 133/275 (48%), Gaps = 6/275 (2%)
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
AFD ++ + G+ S +N+L+ A +M EA + ++ + P++ T NIL+
Sbjct: 315 AFDYRDKMVREGLMPTVST-YNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILI 373
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ G+V + EM+ +G +P+ VTY I K+G A LFE++ R
Sbjct: 374 NGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIF 433
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD--LNAAM 337
P L LI G N+ +A + EM + + PD +N ++ RCR+ + AA
Sbjct: 434 PDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG--RCREGKVEAAR 491
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL++EM+ + I D+++Y+T+ G K ++ ++ D M+ F P T L++
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
C N D L +I +G P+ + L+ G+
Sbjct: 552 CKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 129/303 (42%), Gaps = 1/303 (0%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
S + + C + +++EA + K+ P T N L+ G+ G++ +
Sbjct: 261 SYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRD 320
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+MV G P+V TYN+ I +A + +EM +P T LI+G
Sbjct: 321 KMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCG 380
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ +A L DEM + ++P Y ++I L + + A +L +++ K I D + ++
Sbjct: 381 NVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFN 440
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + ++ + M + K VP T LM+ C +V+ L + R
Sbjct: 441 ALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSR 500
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P + + L++G RG ++AF +ML + +Y L + L + +
Sbjct: 501 GIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHA 560
Query: 477 EDL 479
E L
Sbjct: 561 EQL 563
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 1/116 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+Q C + +++ AR + ++ SR P++ + N L+ G+ + GD+ EM+
Sbjct: 474 FNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEML 533
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
GF P+++TYN I G CK A +L +EM P+ T +LI G G V
Sbjct: 534 SIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIGNV 589
>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
Length = 448
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 148/304 (48%), Gaps = 7/304 (2%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+S F ++ EA+D + + G+ S ++ L+ FC ++ ++A + ++ R
Sbjct: 5 LSAFVRKKKAQEAYDLFKNHL-CGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+N N ++ G ++G V + + Y +M R PSV+TY I +D CK DA
Sbjct: 64 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDAS 122
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ E+M C P++ T TLI+G + N+ +A LF++M + + PD+ YN +I
Sbjct: 123 LILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGY 182
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ +L+ EM + + +TY+T+ L+KS L M+ P
Sbjct: 183 CKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSH 242
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +++ FC ++DL L+ + DRG P + +++++G C R ++A +Q
Sbjct: 243 FTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDA----RQ 298
Query: 448 MLVR 451
+L R
Sbjct: 299 LLER 302
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 122/272 (44%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ +C Q+ ++ + +++ PN T N L+ +SG M+
Sbjct: 175 YNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMML 234
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R +PS T+N+ ID +CK G A LF+ M CLP + T +I GA I
Sbjct: 235 RRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRID 294
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
ARQL + M + PD+ YN+++S L + ++ A E+ + + D VT T+
Sbjct: 295 DARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLI 354
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS L+ KL M P +L+ FC ++D L + ++D+G
Sbjct: 355 DGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCV 414
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P +++ LC R + K ML R
Sbjct: 415 PTVITYSIVIDKLCKSARVRDGCMLLKTMLER 446
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 64/274 (23%), Positives = 123/274 (44%), Gaps = 10/274 (3%)
Query: 154 SYEETLEAFDRMER-----EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL 204
+Y ++ + + ER ++ + K+G E +N L+ + + +A ++ +
Sbjct: 174 TYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMM 233
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L R P++ T N+++ F + G + + M RG P + TYNI I G C+
Sbjct: 234 LRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRI 293
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA +L E M C P + T +++ G + +A ++++ + D+ + +
Sbjct: 294 DDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTL 353
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + R L+ A +L+ EME D V Y + G K+ L+ + M++
Sbjct: 354 IDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGC 413
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
VP T +++ C + RV G L +++RG
Sbjct: 414 VPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 94/206 (45%), Gaps = 1/206 (0%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A LF+ C P T +TLI+G R+ QA +L DEM KR + P YN +I
Sbjct: 16 EAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTII 75
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L +++A+ +M ++ +TY + L KS+ + + + MIE
Sbjct: 76 KGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCA 134
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ FC +D + L+ +++ P ++L+ G C + R ++ +
Sbjct: 135 PNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKL 194
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
++M+ + + +Y L LV++
Sbjct: 195 LQEMVKYGCEPNFITYNTLMDSLVKS 220
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +AR + ++ + P+ T N ++ G ++ V Y +
Sbjct: 280 YNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLR 339
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G+ VVT + IDG CK DA +L EMER P + T LIHG +
Sbjct: 340 NGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLD 399
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
++ F EM + P + Y+ +I L + + L+ M E+ +
Sbjct: 400 KSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448
>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Glycine max]
Length = 703
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 6/288 (2%)
Query: 174 RKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLSRF---APNNKTMNILLLGFKESGDV 228
R FG +N+ +L+ FC + +A S+F ++ + P+ T N L+ GF ++ +
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165
Query: 229 TAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ + M G RP++VTY++ ID YCK G G+ + L EEMER + ++
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI +I R+LFDEM +R + P++ Y+ ++ L R A E++ +M +
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D V Y + GL K+ K+ D M++ P T T +++ C R+D
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+ ++ +G P + L+ GLC G+ EA + K +L + V
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 85/349 (24%), Positives = 156/349 (44%), Gaps = 12/349 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S ++ + K + Y+ + + +M + + +F S + L ++F A SV
Sbjct: 44 ACSTLIDNLRKARQYDAVVSVYHKMVSALV--LPRFTS--LSALTESFVNTHHPSFAFSV 99
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFR---PSVVTYNIRID 255
+ R F N +N++L GF SG AM +F + R + P VTYN ++
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQ--MKRNYDCVVPDCVTYNTLVN 157
Query: 256 GYCKKGCFGDAMRLFEEMERVA-CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G+CK +A LFE M++ C P+L T + LI + + L +EM + LK
Sbjct: 158 GFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLK 217
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
D+ Y+++IS+ D+ EL DEM +++ + VTY + GL ++ ++
Sbjct: 218 ADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEM 277
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
M P +L C N R + + ++ +G P +++V GLC
Sbjct: 278 LKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCK 337
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
R ++AF + M+ + ++ +Y L + L A + DL +++
Sbjct: 338 EDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLL 386
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 155/384 (40%), Gaps = 55/384 (14%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE-----IFVGIRKFG 177
+E M P+L+T S+++ K E L + MERE +FV
Sbjct: 172 FEAMKKGGDCRPNLVTY---SVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFV------ 222
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ AFC + +++ R +F ++L R +PN T + L+ G +G
Sbjct: 223 ---YSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF-------------------------- 270
+M RG RP VV Y + DG CK G GDA+++
Sbjct: 280 DMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKED 339
Query: 271 ---------EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM--PKRNLKPDIGA 319
E M + P T TL+ G IH+A L+ + K ++KPD+
Sbjct: 340 RMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFT 399
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
N +I L + ++ A + M E + + VTY+ + G + + L KL+ +
Sbjct: 400 CNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAV 459
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E F P + T +++ C + + L+ + D G P + L+T LC E
Sbjct: 460 ESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLE 519
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
+A ++M V S+ ++
Sbjct: 520 QARSLFQEMRNVNHNVDVVSFNII 543
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 133/292 (45%), Gaps = 4/292 (1%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMN 216
+AF +E + G +K + +N LL+ C ++ EA ++ LLS P+ T N
Sbjct: 343 DAFGVVEMMVKKG-KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCN 401
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + G V + MV G + ++VTYN I+GY +A++L++
Sbjct: 402 NLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVES 461
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P+ T + +I+G ++ + AR LF +M ++P + YNA+++SL R L A
Sbjct: 462 GFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQA 521
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L EM D V+++ + G +K+ ++ +L M VP T +L+
Sbjct: 522 RSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINR 581
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
F +D + L+ ++ G P D L+ G +G E+ QM
Sbjct: 582 FSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQM 633
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/257 (23%), Positives = 110/257 (42%), Gaps = 1/257 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+Q C + + +A + ++ N T N L+ G+ + + + V
Sbjct: 401 NNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVE 460
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF P+ +TY++ I+G CK A LF +M+ P++ L+ ++ Q
Sbjct: 461 SGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQ 520
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR LF EM N D+ ++N +I ++ D+ +A EL+ EM + D VT+ +
Sbjct: 521 ARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILIN 580
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
K L+ LY++M+ VP L+K + + + ++L + D+
Sbjct: 581 RFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVL 640
Query: 421 HGHALDLLVTGLCSRGR 437
++ LC R
Sbjct: 641 DSKLTSTILACLCHMSR 657
>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
Length = 1060
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 13/388 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS NV G L A S + +E + P A L L + FD W+
Sbjct: 121 SSKFTPNVFGVLIIAFSE-MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 125 LMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEF 181
+ + + P+++T ++ R F + FD M E++IF + +
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFL---KAFRLFDEMIEKKIFPTVVIY----- 231
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+L++ C + + EA S+F + S PN T N ++ G+ + V Y EM+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLG 291
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+VVT+ I IDG CK A + +M +P++ LI G N+ +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L E+ K + PD+ Y+ +I L + A L+ EM++K + VTY+T+
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K +E ++ +M E P T L+ +C +++ + L+ ++ +G P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
A L+ G G +EAF K+M
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 160/399 (40%), Gaps = 56/399 (14%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+ALE F + P + +H+L + + +A LM + + +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQC-----------L 100
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
SR S+ R+E KF F VL+ AF ++EA V+ K+
Sbjct: 101 QKSRRSRICC--SVFNVLSRLESS------KFTPNVFGVLIIAFSEMGLVEEALWVYYKM 152
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P + N++L G + G M Y +MV RG P+VVTY IDG C++G F
Sbjct: 153 --DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A RLF+EM P++ T LI G I +A +F M + P++ YN M+
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG----------------- 367
+ + A+EL EM + + VT+ + GL K+
Sbjct: 271 DGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
++G CK L+ + + + +P T +L+K C R++ L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ +GF P+ + L+ G C G E+A E QM
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 154/369 (41%), Gaps = 22/369 (5%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
LKA F ++ F PT + + L +A E M R L L + +
Sbjct: 210 LKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGESRISEA-ESMFRTMRNSGMLPNLYTYN 267
Query: 144 IMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
M+ K ++ LE + M + + + FG +L+ C EM AR +
Sbjct: 268 TMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFG-----ILIDGLCKTDEMVSARKFLI 322
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ S PN N L+ G+ ++G+++ + E+ P V TY+I I G C
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD 382
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A L +EM++ LP+ T TLI G N+ +A ++ +M ++ ++P+I ++
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + + AAM L EM K + D V Y + G K + +L+ M E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLW------------GYLIDRGFCPHGHAL-DLL 428
P T+ L+ C + R+ + L+ +DR C H + L
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTAL 562
Query: 429 VTGLCSRGR 437
+ GLC+ GR
Sbjct: 563 IQGLCTDGR 571
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 56/330 (16%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
KF + F P+ F I + +A L S +++ H L + + SI++
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK-HEILPDVFTYSILIKG 377
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ EE M+++ F+ + +N L+ +C + M++A V ++ +
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLP----NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY---------- 257
PN T + L+ G+ ++G + A Y EMV++G P VV Y IDG+
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493
Query: 258 -------------------------CKKGCFGDAMRLF-------------EEMERVACL 279
CK G DA++LF E++R C
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS 553
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T LI G I +A + F +M L+PD+ +I R L M L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
++ + I ++ Y + G +S L+
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLK 643
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%)
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K ++ P + A N ++ L++ + ++ +M + + VTY T+ G +
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L+D MIE K P +L++ C R+ +++ + + G P+ + + ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 430 TGLCSRGRWEEAFECSKQML 449
G C ++A E +ML
Sbjct: 271 DGYCKIAHVKKALELYXEML 290
>gi|410109937|gb|AFV61048.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
pusilla]
Length = 431
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/353 (28%), Positives = 161/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMLASGVQPDXYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KKG AM +++ M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMVMKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDTGTYTMIINEFCKKGDVWKGSRLLKEMQRNGHVPSVVTYNVLMNG 431
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDXYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K ++ ++Y RM+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKKGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ +G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 309 VMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 367 -RSVDAEKMLREMLSVGLKPDT 387
>gi|410109915|gb|AFV61037.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
brasiliensis]
Length = 427
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 87 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYKXILECGYPA--SLYFFNI 143
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 144 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 195
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 196 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 254
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++ M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 255 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 314
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 315 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREM 374
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 375 LSVGLKPNXRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 427
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 111/248 (44%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ F + GD+ + + + G RPSVV+YN ++GY + G + RL M
Sbjct: 142 NILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLA 201
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T + LI+G + A +LFDEM + L P+ + +I + ++
Sbjct: 202 SGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDL 261
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AME+ M + + D +TY+T+ +GL K L+ L D M P T L+
Sbjct: 262 AMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKITYTTLID 321
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C +D +I A L++GLC GR +A + ++ML +
Sbjct: 322 GCCKEGDLDTAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKP 381
Query: 456 SEASYRML 463
+ +Y M+
Sbjct: 382 NXRTYTMI 389
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/395 (21%), Positives = 159/395 (40%), Gaps = 68/395 (17%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQS---YE 156
+P F TLH M +F L +H + L + +++SR K + +
Sbjct: 5 SPANSTFRHTLHSYCTMIHF-----LCTHQMLSEAKXL----IQVVVSRKGKGSASAVFA 55
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPNN 212
LE +IFV F+ L+ A+ + +++A + L+R + P +
Sbjct: 56 AILETKGTQRSDIFV---------FSGLITAYLESEFLRDAIECY--RLTREHKFWVPFD 104
Query: 213 KTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+L L+ K V FY ++ G+ S+ +NI + +CK G
Sbjct: 105 TCRKVLEHLMKLKYFKLVWG---FYKXILECGYPASLYFFNILMHRFCKDG--------- 152
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+I A+ +FD + K L+P + +YN +++ IR
Sbjct: 153 --------------------------DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRL 186
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
DL+ L M + D TY + GL K S ++ +L+D M+ VP T
Sbjct: 187 GDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTF 246
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M +
Sbjct: 247 TTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHHLIDEMSM 306
Query: 451 RRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
+ + + +Y ++ + + + E RMI+
Sbjct: 307 KGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQ 341
>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
Length = 2021
Score = 122 bits (306), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/433 (23%), Positives = 185/433 (42%), Gaps = 57/433 (13%)
Query: 97 PHFTPTPDAF-EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
P F+ + + F K+LH D A + + HP ++ + +L+ I+K + Y
Sbjct: 27 PFFSSSQNNFHSKSLH----FNTLDDALSSFNRLLHMHPPP-SIVDFAKLLTSIAKMKHY 81
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAP 210
L +M+ FG N+L+ +FC + A SV K+L P
Sbjct: 82 STVLSLSTQMD--------SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQP 133
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G G + + +M+ GF+P+VVTY I+G CK G A+RL
Sbjct: 134 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR- 329
ME+ C P + T++I R + +A LF +M + + PDI Y +++ +L
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253
Query: 330 --------------------------------CRD--LNAAMELMDEMEEKRIGHDNVTY 355
C++ + A E++D M ++ + D VTY
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ G S ++ K++D M+ F P + L+ +C ++D + L+ +
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 373
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ + P + L+ GLC GR ++A +M+ R + +Y +L L + N
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCK---NRH 430
Query: 476 LEDLDRMIKNLQA 488
LE+ ++K ++A
Sbjct: 431 LEEAMALLKAIEA 443
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 150/356 (42%), Gaps = 11/356 (3%)
Query: 126 MSHVQRTHPSLLTLKSMS---------IMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
+ V T ++ L+SM I S I + EAF+ + + GI
Sbjct: 180 LCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP- 238
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ L+ A C E K ++ +++ S+ P+ + ++ + G VT
Sbjct: 239 DIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 298
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M+ RG P VVTY +DG+C + +A+++F+ M R P + + TTLI+G +
Sbjct: 299 DMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKI 358
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I +A LF+EM ++ PD YN ++ L L A+ L EM + D VTY
Sbjct: 359 HKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTY 418
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ L K+ LE L + P + +++ C ++ +L+ L
Sbjct: 419 SILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSS 478
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+G P ++++ GLC RG EA + +M +Y + R +Q N
Sbjct: 479 KGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNN 534
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 107/229 (46%), Gaps = 5/229 (2%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+E ++ FD M R+ F + L+ +C ++ +A +F ++ + + P+ KT
Sbjct: 327 DEAVKVFDMMVRKGFAP----DVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKT 382
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G G + +HEMV RG P +VTY+I +D CK +AM L + +E
Sbjct: 383 YNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIE 442
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P +Q +I G + AR LF + + L P + YN MI L + LN
Sbjct: 443 ASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLN 502
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
A +L EM+ D TY+T+ G ++++ +L + M+ F
Sbjct: 503 EANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 1/239 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C Q EM EA VF ++ + FAP+ + L+ G+ + + + EM
Sbjct: 313 YTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMC 372
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + P TYN + G C G DA+ LF EM +P L T + L+ R++
Sbjct: 373 RKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L + NL PDI YN +I + R +L AA +L + K + TY+ M
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K L KL+ M P T + + F N + L ++ RGF
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 167/428 (39%), Gaps = 53/428 (12%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H H P+ F K L +A+M+++ L + + P++ TL + I+
Sbjct: 56 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL------INS 109
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR 207
F AF + I K G + F L++ C + ++ EA +F K++
Sbjct: 110 FCHLNRVGFAFS-----VLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDE 164
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
F PN T L+ G + G+ +A M +P VV Y ID CK +A
Sbjct: 165 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEA 224
Query: 267 MRLFEEMERVACLPSLQTITTLIHG---------------------------------AG 293
LF +M P + T T+L+H
Sbjct: 225 FNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDA 284
Query: 294 LVR--NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + + +A ++ D M +R ++PD+ Y ++ +++ A+++ D M K D
Sbjct: 285 LCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPD 344
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
++Y T+ G K ++ L++ M +++P T+T LM C R+ + L+
Sbjct: 345 VISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFH 404
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++ RG P +L+ LC EEA K + Y ++ + +A
Sbjct: 405 EMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAG 464
Query: 472 ANEKLEDL 479
E DL
Sbjct: 465 ELEAARDL 472
>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
Length = 731
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 8/309 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+L+T SM ++ + K E+ + FD M RE G+ G +N L+ +C
Sbjct: 258 PNLVTFNSM---VNGMCKAGKMEDARKVFDEMVRE---GLAPDGVS-YNTLVGGYCKAGC 310
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
EA SVF ++ + P+ T L+ ++G++ +M RG + + VT+
Sbjct: 311 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTA 370
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
IDG+CKKG DA+ M++ PS+ LI+G +V + +AR+L EM +
Sbjct: 371 LIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 430
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
LKPD+ Y+ +IS+ + D ++A EL +M EK + D +TY ++ L L
Sbjct: 431 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAH 490
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L+ MI+ P T L+ C V+ L+L ++ G P +L+ GL
Sbjct: 491 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGL 550
Query: 433 CSRGRWEEA 441
R EA
Sbjct: 551 SKSARAMEA 559
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 141/307 (45%), Gaps = 4/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++A C + KEA S+ + + PN T N L+ F +G+V E M
Sbjct: 193 YNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMR 252
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P++VT+N ++G CK G DA ++F+EM R P + TL+ G H
Sbjct: 253 EGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSH 312
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F EM ++ + PD+ + ++I + + +L A+ L+ +M E+ + + VT+ +
Sbjct: 313 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALI 372
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K L+ M + + P L+ +C+ R+D L + +G
Sbjct: 373 DGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 432
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +++ C AFE ++QML + +Y L R L ++L D
Sbjct: 433 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLC---GEKRLSDA 489
Query: 480 DRMIKNL 486
+ KN+
Sbjct: 490 HVLFKNM 496
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF E+ A R V + PN T N ++ G ++G + + EMV
Sbjct: 228 YNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMV 287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+YN + GYCK GC +A+ +F EM + +P + T T+LIH N+
Sbjct: 288 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 347
Query: 300 QARQLFDEMPKRNL-----------------------------------KPDIGAYNAMI 324
+A L +M +R L KP + YNA+I
Sbjct: 348 RAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALI 407
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++ A EL+ EME K + D VTY T+ K+ +L +M+E +
Sbjct: 408 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 467
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L++ C R+ L+ +I G P L+ G C G E A
Sbjct: 468 PDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSL 527
Query: 445 SKQML 449
+M+
Sbjct: 528 HDKMV 532
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 63/276 (22%), Positives = 123/276 (44%), Gaps = 2/276 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+ P+ N +LL ++ +T+ F+ M+ G P+V TYNI + C +G +A+
Sbjct: 152 YVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 210
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ +M C P++ T TL+ + A +L M + LKP++ +N+M++ +
Sbjct: 211 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGM 270
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ + A ++ DEM + + D V+Y+T+ G K+ ++ M + +P
Sbjct: 271 CKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 330
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ C ++ + L + +RG + L+ G C +G ++A +
Sbjct: 331 VTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 390
Query: 448 MLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
M R + S Y ++ Y + +E E L M
Sbjct: 391 MKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 426
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 143/330 (43%), Gaps = 19/330 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C M EAR + ++ ++ P+ T + ++ + ++ D + +M+
Sbjct: 403 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 462
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +TY+ I C + DA LF+ M ++ P T T+LI G N+
Sbjct: 463 EKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 522
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L D+M K + PD+ Y+ +I+ L + A +L+ ++ + N Y +
Sbjct: 523 SALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALM 582
Query: 360 FGLMKS------SGLEGVC---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
K+ + L+G C K+Y M++ + +L+ C V
Sbjct: 583 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 642
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV-SEASYRML 463
L+ ++ GF P+ + L+ GL G EA + +Q+L +EAS ++
Sbjct: 643 KALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNYCSLADAEASKALI 702
Query: 464 QRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
L + N + L+ L M K+ +LP P
Sbjct: 703 DLNLNEGNVDAVLDVLHGMAKD--GLLPSP 730
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 81/188 (43%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ AR+ FD M + P++ YN ++ +L A+ ++ +M G + VTY+
Sbjct: 170 SLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYN 229
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ ++ ++G +L M EG P T ++ C +++ ++ ++
Sbjct: 230 TLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVRE 289
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P G + + LV G C G EA +M + ++ L + +A E+
Sbjct: 290 GLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERA 349
Query: 477 EDLDRMIK 484
L R ++
Sbjct: 350 VTLVRQMR 357
>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
Japonica Group]
gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
sativa Japonica Group]
gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
Length = 578
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 175/432 (40%), Gaps = 40/432 (9%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
L+ ++L A S L+A + F + HP P+ + L L + D A +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179
Query: 127 SHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEE 180
+R P + T ++ L RI + R ++ I+ +G
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQL-----------RKAGDVAKDIKAWGLAPSVAT 228
Query: 181 FNVLLQAFCTQ-------------KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
+N L+ +C + KEM EA +P T +L+ G+ ++ +
Sbjct: 229 YNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG---------ISPTAVTFGVLINGYCKNSN 279
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
A + EM +G SVVTYN I G C +G + ++L EEME + P+ T
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G + A D M +RN++PD+ YN +I R + AM + + M +K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + TY+ + G +S L D M E T +L+ C V +
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L + + G P+ + ++ G C +G + A+E +M R++ + +Y + +Y
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 468 VQANANEKLEDL 479
Q ++ DL
Sbjct: 520 CQIGKMDEANDL 531
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 13/313 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T + ++++ K + + F+ M+++ GI +N L+ C++ +++E
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ---GIAA-SVVTYNSLISGLCSEGKVEEG 318
Query: 198 RSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
VKL+ +PN T +L GF + G + + M R P VV YNI
Sbjct: 319 ----VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
ID Y + G DAM + E M + P++ T LI G + A L DEM ++
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++ D+ YN +I +L ++ A++L+DEM E + +++TY+T+ G ++
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++ RM + + T + +K+FC ++D +L ++D+ P+G + + G+
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 433 CSRGRWEEAFECS 445
+G + C+
Sbjct: 555 MEKGYTPDIRGCT 567
>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 747
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 92/409 (22%), Positives = 179/409 (43%), Gaps = 17/409 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
Q +P + N+L R F N AL F ++ P + + ++R
Sbjct: 200 QVSP--NVFTYNILIRGFCFAGNIDVALTLFD-KMETKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 120 DQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D ++L+ ++ P+L++ + L R + + L +R R +
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNR---------RGYS 307
Query: 178 SEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+E +N L++ +C + +A + ++L P+ T L+ ++G++ F
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEF 367
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+M +RG P+ TY +DG+ +KG +A R+ EM PS+ T LI+G +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCV 427
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ A + ++M ++ L PD+ +Y+ ++S R D++ A+ + EM EK I D +T
Sbjct: 428 TGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTIT 487
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y ++ G + + C LY+ M+ P T L+ +C+ ++ L L ++
Sbjct: 488 YSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++G P +L+ GL + R EA ++ S+ +Y L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/397 (22%), Positives = 180/397 (45%), Gaps = 17/397 (4%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSYEET 158
T F+ + +R+ D+A ++ H+ + H P +L+ ++ R + S+ E
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIV-HLAQAHGFMPGVLSYNAVLDATIRSKRNISFAEN 191
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
+ F M E ++ + + N+L++ FC + A ++F K+ ++ PN T N
Sbjct: 192 V--FKEMLESQVSPNVFTY-----NILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYN 244
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G+ + + M L+G P++++YN+ I+G C++G + + EM R
Sbjct: 245 TLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRR 304
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
T TLI G N HQA + EM + L P + Y ++I S+ + ++N A
Sbjct: 305 GYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRA 364
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
ME +D+M + + + TY T+ G + + ++ M + F P T L+
Sbjct: 365 MEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALING 424
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
CV +++ + + + ++G P + +++G C +EA ++M+ + +
Sbjct: 425 HCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPD 484
Query: 457 EASY-RMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+Y ++Q + Q E + + M L+ LPP
Sbjct: 485 TITYSSLIQGFCEQRRTKEACDLYEEM---LRVGLPP 518
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 104/412 (25%), Positives = 178/412 (43%), Gaps = 35/412 (8%)
Query: 64 LSSTLVENVLGRLFAAHSNGL---KALEFFK---FTLQHPHFTPTPDAFEKTLHILARMR 117
L+ TL+ L ++ S+ L KAL F K + L H TP+A ++L + +
Sbjct: 3 LTKTLIRRSLSTFASSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAAS---NLLLKSQ 59
Query: 118 YFDQAWELMSHVQRTHP-SLLTLKSMSIMLSRISKFQSYEET-LEAFDRMEREIFVGIRK 175
DQA ++ + +P TL+ I L ++KF+ Y+ + A D + + +
Sbjct: 60 N-DQAL-ILKFLNWANPHQFFTLRCKCITLHILTKFKLYKTAQILAEDVAAKTL---DDE 114
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL----GF--------- 222
+ S F L + + + VK SR + +K ++I+ L GF
Sbjct: 115 YASLVFKSLQETYDLCYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNA 174
Query: 223 ------KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+ +++ E + EM+ P+V TYNI I G+C G A+ LF++ME
Sbjct: 175 VLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETK 234
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
CLP++ T TLI G +R I +L M + L+P++ +YN +I+ L R +
Sbjct: 235 GCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEV 294
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++ EM + D VTY+T+ G K ++ M+ P T L+
Sbjct: 295 SFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHS 354
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C ++ + + RG CP+ LV G +G EA+ ++M
Sbjct: 355 MCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREM 406
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 150/334 (44%), Gaps = 27/334 (8%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQ 191
PS++T S+ + + K + +E D+M +R E + L+ F +
Sbjct: 343 PSVITYTSL---IHSMCKAGNMNRAMEFLDQMR------VRGLCPNERTYTTLVDGFSQK 393
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
M EA V ++ F+P+ T N L+ G +G + +M +G P VV+Y
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
+ + G+C+ +A+R+ EM P T ++LI G R +A L++EM +
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
L PD Y A+I++ DL A++L +EM EK + D VTY + GL K S
Sbjct: 514 VGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTRE 573
Query: 371 VCKL---------------YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+L Y +IE + ++VV L+K FC+ + ++ ++
Sbjct: 574 AKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLG 633
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ P G A ++++ G C G +A+ K+M+
Sbjct: 634 KNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 85/221 (38%), Gaps = 55/221 (24%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S S +LS + +E L R++RE+ K + ++ L+Q FC Q+ KEA +
Sbjct: 452 SYSTVLSGFCRSYDVDEAL----RVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDL 507
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG--- 256
+ ++L P+ T L+ + GD+ ++EMV +G P VVTY++ I+G
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 257 -----------------------------------------------YCKKGCFGDAMRL 269
+C KG +A ++
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQV 627
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
FE M P +IHG +I +A L+ EM K
Sbjct: 628 FESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 22/136 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNN---------------KTMNILLLGFKE 224
++VL+ Q +EA+ + +KL P++ K++ L+ GF
Sbjct: 558 YSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCM 617
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +T + + M+ + +P YNI I G+C+ G A L++EM + L L T
Sbjct: 618 KGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFL--LHT 675
Query: 285 ITTLIHGAGLVRNIHQ 300
+T + LV+ +H+
Sbjct: 676 VTVI----ALVKALHK 687
Score = 42.7 bits (99), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 53/134 (39%), Gaps = 1/134 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ FC + M EA VF +L + P+ NI++ G +GD+ Y EMV G
Sbjct: 611 LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSG 670
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F VT + K+G + + + R L + L+ N+
Sbjct: 671 FLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDVVL 730
Query: 303 QLFDEMPKRNLKPD 316
+ EM K P+
Sbjct: 731 DVLAEMAKDGFLPN 744
>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
Length = 728
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 129/270 (47%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV++ FC Q + EA + ++ + + +P+ T N L+ G E G EM
Sbjct: 305 YNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEME 364
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P+ VTYN+ + + KKG + + +ME CLP + T TLI V +
Sbjct: 365 GRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMD 424
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM ++ LK D N M+ +L R R L+ A +L+ + D V+Y T+
Sbjct: 425 EAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLI 484
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K +L+D M E + +P T ++ C + + ++ L++ G
Sbjct: 485 IGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLV 544
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + ++ G C G+ E+AF+ +M+
Sbjct: 545 PDEITYNTIIHGYCQEGQVEKAFQFHNKMV 574
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 162/374 (43%), Gaps = 24/374 (6%)
Query: 121 QAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG- 177
QA ++ + ++R P+LLT ++ L R S R+ + +F K G
Sbjct: 142 QAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSI--------RLSKAVFTDFIKIGV 193
Query: 178 ---SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEM 233
+ FN+L+ C + EA V K+ P +N T N +L G + G +
Sbjct: 194 KINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARD 253
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+M +G P+ T+NI + G C+ G +A + E M + + +P T +I G
Sbjct: 254 LLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
I +A +L +EM L PD+ YN +I+ +L++EME + + ++V
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ M +K ++ V K +M E +P T L+ + C ++D L +
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFE--CSKQMLVRRRQ--VSEASY-RMLQRYLV 468
+G L+ ++ LC + +EA + CS RRR V E SY ++ Y
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCS----ARRRGYFVDEVSYGTLIIGYFK 489
Query: 469 QANANEKLEDLDRM 482
A++ L D M
Sbjct: 490 HEKASQALRLWDEM 503
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 36/304 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +E + ++ R PN+ T N+++ F + G + ++ +M
Sbjct: 340 YNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKME 399
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI- 298
G P +VTYN I +CK G +A RL +EM R T+ T++ R +
Sbjct: 400 ESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLD 459
Query: 299 ----------------------------------HQARQLFDEMPKRNLKPDIGAYNAMI 324
QA +L+DEM ++ + P I YN+MI
Sbjct: 460 EAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMI 519
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L + N A++ +DE+ E + D +TY+T+ G + +E + +++M+E F
Sbjct: 520 AGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFK 579
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ C ++ L L+ I +G + + ++ LC R+ EAF+
Sbjct: 580 PDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDL 639
Query: 445 SKQM 448
++M
Sbjct: 640 LEEM 643
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 119/283 (42%), Gaps = 43/283 (15%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T ++ +S K +E D M R+ K N +L+A C +++
Sbjct: 405 PDIVTYNTL---ISWHCKVGKMDEAFRLMDEMGRKGL----KMDDVTLNTMLRALCRERK 457
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA + R + + + L++G+ + + + EM + PS++TYN
Sbjct: 458 LDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNS 517
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I G C+ G A+ +E+ +P T T+IHG + +A Q ++M ++N
Sbjct: 518 MIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKN 577
Query: 313 LKPDIG-----------------------------------AYNAMISSLIRCRDLNAAM 337
KPD+ +YN +I SL + + A
Sbjct: 578 FKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAF 637
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+L++EMEEK++G D TY+ + GL + ++ + ++ E
Sbjct: 638 DLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 106/239 (44%), Gaps = 8/239 (3%)
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-ERE 168
L L R R D+A +L+ +R + S ++ K + + L +D M E+E
Sbjct: 449 LRALCRERKLDEAHDLLCSARR-RGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKE 507
Query: 169 IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGD 227
I I + N ++ C + +A +LL S P+ T N ++ G+ + G
Sbjct: 508 IIPSIITY-----NSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
V F+++MV + F+P VVT N + G CK+G A++LF + T
Sbjct: 563 VEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNT 622
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+I + +A L +EM ++ L PD YNA++ L + A E + ++ EK
Sbjct: 623 IILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEK 681
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/277 (18%), Positives = 123/277 (44%), Gaps = 8/277 (2%)
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL----F 270
++I + + G ++ M G +P+++T N ++ + ++RL F
Sbjct: 127 LDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPS-SHSIRLSKAVF 185
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ ++ + + LIHG+ + +A ++ +M PD YN ++ L +
Sbjct: 186 TDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKK 245
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
LN A +L+ +M+ K + + T++ + G + L+ + + M + VP T
Sbjct: 246 GRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTY 305
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+++ FC R+ + L + + P + L+ G G EE F+ ++M
Sbjct: 306 NVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEG 365
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
R + + +Y ++ ++ V+ K++++D+ ++ ++
Sbjct: 366 RGMKPNSVTYNVMVKWFVKKG---KMDEVDKTVRKME 399
>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Cucumis sativus]
Length = 665
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 103/409 (25%), Positives = 183/409 (44%), Gaps = 23/409 (5%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMS-HVQR-THPSLLTLKSMSIMLSRISKFQSYEE 157
+P + L L +A E++ +QR +P ++T +I++ K +
Sbjct: 209 SPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVIT---YTILIEATCKESGVGQ 265
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PN 211
++ D M R G + +NVL+ C + + EA F+ + + PN
Sbjct: 266 AMKLLDEM--------RDKGCKPDVVTYNVLINGICKEGRLDEAIR-FLNHMPSYGCQPN 316
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T NI+L +G E F EM+ +G PSVVT+NI I+ C+KG G A+ + E
Sbjct: 317 VITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLE 376
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M + C P+ + L+H + + +A + D M R PDI YN ++++L +
Sbjct: 377 KMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 436
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A+E+++++ K +TY+T+ GL K + KL D M P T
Sbjct: 437 KVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYS 496
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +VD + + L + G P+ + ++ GLC + A + M+ R
Sbjct: 497 TLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVAR 556
Query: 452 RRQVSEASYRMLQRYLV-QANANEKLEDLDRMIKNLQAVLPPPTRQQVA 499
+ +E SY +L L + A E LE L+ + + V+ + +QV
Sbjct: 557 GCKPTETSYMILIEGLAYEGLAKEALELLNELCS--RGVVKKSSAEQVV 603
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 145/317 (45%), Gaps = 13/317 (4%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T ++++S K L+ DRM V +N +L+ C +
Sbjct: 178 PDVIT---YNVLISGYCKTGEIGSALQLLDRMSVSPDV-------VTYNTILRTLCDSGK 227
Query: 194 MKEARSVFVKLLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+KEA V + + R P+ T IL+ KESG AM++ EM +G +P VVTYN
Sbjct: 228 LKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLL-DEMRDKGCKPDVVTYN 286
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ I+G CK+G +A+R M C P++ T ++ A + EM ++
Sbjct: 287 VLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRK 346
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P + +N +I+ L R + A++++++M + ++++Y+ + L K +E
Sbjct: 347 GCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERA 406
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ D M+ P T L+ C + +VD+ + + L +G P + ++ G
Sbjct: 407 IEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDG 466
Query: 432 LCSRGRWEEAFECSKQM 448
L G+ ++A + +M
Sbjct: 467 LSKVGKTDDAIKLLDEM 483
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 107/236 (45%), Gaps = 3/236 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F +MV RG P ++ I G CK G A R+ E +E +P + T LI G
Sbjct: 132 FLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYC 191
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
I A QL D M ++ PD+ YN ++ +L L AME++D ++ D +
Sbjct: 192 KTGEIGSALQLLDRM---SVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVI 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + K SG+ KL D M + P T +L+ C R+D + ++
Sbjct: 249 TYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G P+ ++++ +CS GRW +A + +M+ + S ++ +L +L +
Sbjct: 309 PSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCR 364
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 121/288 (42%), Gaps = 6/288 (2%)
Query: 184 LLQAFC-TQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ C T K K R + + S P+ T N+L+ G+ ++G++ + M +
Sbjct: 151 LIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS- 209
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VVTYN + C G +AM + + + C P + T T LI + QA
Sbjct: 210 --PDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L DEM + KPD+ YN +I+ + + L+ A+ ++ M NV H +
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGC-QPNVITHNIILRS 326
Query: 363 MKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
M S+G K MI P T +L+ F C + +++ + G P+
Sbjct: 327 MCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPN 386
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + L+ LC + E A E M+ R +Y L L +
Sbjct: 387 SLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCK 434
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 120/281 (42%), Gaps = 14/281 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARM----RYFDQAWELMSHVQR-THPSLLTLKSM 142
E +F P + P+ + IL M R+ D L +++ PS++T +
Sbjct: 300 EAIRFLNHMPSYGCQPNVITHNI-ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
L R A D +E+ G S +N LL A C K+M+ A
Sbjct: 359 INFLCRKGLIG------RAIDVLEKMPQHGCTP-NSLSYNPLLHALCKDKKMERAIEYLD 411
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++SR P+ T N LL + G V +++ +G P ++TYN IDG K G
Sbjct: 412 IMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVG 471
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
DA++L +EM+ P + T +TL+ G + +A F ++ + +KP+ YN
Sbjct: 472 KTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYN 531
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+++ L + R A++ + M + +Y + GL
Sbjct: 532 SIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGL 572
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 86/184 (46%), Gaps = 3/184 (1%)
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G + + E+M +P + T+LI G +A ++ + + PD+
Sbjct: 122 RNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVI 181
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +IS + ++ +A++L+D M + D VTY+T+ L S L+ ++ DR
Sbjct: 182 TYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQ 238
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
++ + P T +L++ C V + L + D+G P ++L+ G+C GR
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298
Query: 439 EEAF 442
+EA
Sbjct: 299 DEAI 302
>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
Length = 659
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 99/405 (24%), Positives = 171/405 (42%), Gaps = 53/405 (13%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD + + ++ D+A L+ + +R P+++T ++ I F +
Sbjct: 265 PDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTL------IGGFSRADRL 318
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+A+ ME GI +N LL C +++EA + ++ + AP+ T +I
Sbjct: 319 ADAYRVMEDMFKAGISP-DLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSI 377
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G V + M+ RG +P++VT+N IDG+CK G + ++ E M+ V+
Sbjct: 378 LVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVS 437
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T +TLI G +A ++ D + PD +Y++M+ L + A
Sbjct: 438 CTPDVVTYSTLIDG------YCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQ 491
Query: 338 ELMD-----------------------------------EMEEKRIGHDNVTYHTMFFGL 362
E+MD M E+ + TY + GL
Sbjct: 492 EVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGL 551
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K+ +E + D M+E VP T L+ FC ++D + + D G P
Sbjct: 552 CKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDK 611
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
A ++L++G C G E+A E + ML + A+Y L R L
Sbjct: 612 LAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSL 656
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 141/285 (49%), Gaps = 5/285 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+N T L+ GF +G+ + +EM+ R F P V+T+N + YC+ G A+
Sbjct: 22 PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F ++ C P+ T LIHG + I +A QL DEM +++ PD YN +I+ L +
Sbjct: 82 FR--GKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++AA ++ M E+ D +TY ++ G +++ L+ KL ++M E P T
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C +++ L +++ G P + + +V LC G++EEA + ++M+
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
++ +Y L + + K+++ +R+++++ PT
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVS---KMDEAERLLEDMVGRRCAPT 301
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 105/433 (24%), Positives = 179/433 (41%), Gaps = 44/433 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+PT + +H L + + D+A++L+ + + HP + L ++ K +
Sbjct: 89 SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARN 148
Query: 158 TLE-------------------------AFDRMEREIFVGIRKFG----SEEFNVLLQAF 188
L+ A D R++ +++ G + +N LL
Sbjct: 149 VLKMMLERSCVPDVITYTSLIVGCCQTNALDE-ARKLMEKMKESGLTPDTVAYNALLNGL 207
Query: 189 CTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C Q +++E + +++ + P+ + N ++ ESG +M+ + P V
Sbjct: 208 CKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDV 267
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTYN +DG+CK +A RL E+M C P++ T TTLI G + A ++ ++
Sbjct: 268 VTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVMED 327
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M K + PD+ YN ++ L + L A EL++ M EK D VTY + GL K
Sbjct: 328 MFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGK 387
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
++ L + M+E P T ++ FC +VD G + + + P
Sbjct: 388 VDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYST 447
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKNL 486
L+ G C R ++AF + +ASY ML+ E E +D M K
Sbjct: 448 LIDGYCKANRMQDAFA------ILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK-- 499
Query: 487 QAVLPPPTRQQVA 499
Q PPT A
Sbjct: 500 QGC--PPTSSHYA 510
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 130/298 (43%), Gaps = 1/298 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N +L+A+C ++ A S F + +P T IL+ G + + EM+ +
Sbjct: 63 NTILKAYCQIGDLDRALSHFRGKM-WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQK 121
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P YN I G CK G A + + M +C+P + T T+LI G + +A
Sbjct: 122 DCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEA 181
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
R+L ++M + L PD AYNA+++ L + L +L++EM E D +Y+T+
Sbjct: 182 RKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVAC 241
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L +S E K+ ++MIE K P T LM FC ++D L ++ R P
Sbjct: 242 LCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPT 301
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
L+ G R +A+ + M +Y L L +A E+ +L
Sbjct: 302 VITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHEL 359
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 152/329 (46%), Gaps = 9/329 (2%)
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKES 225
RE F K + + L+ F K + ++L+R F+P+ T N +L + +
Sbjct: 13 RERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQI 72
Query: 226 GDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
GD+ A+ F +M P+ TY I I G C+ +A +L +EM + C P
Sbjct: 73 GDLDRALSHFRGKMWC---SPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAV 129
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI G + I AR + M +R+ PD+ Y ++I + L+ A +LM++M+
Sbjct: 130 YNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMK 189
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
E + D V Y+ + GL K + LE V KL + M+E P T + ++ C + + +
Sbjct: 190 ESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYE 249
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ +I++ P + L+ G C + +EA + M+ RR + +Y L
Sbjct: 250 EAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLI 309
Query: 465 RYLVQANANEKLEDLDRMIKNL-QAVLPP 492
+A+ +L D R+++++ +A + P
Sbjct: 310 GGFSRAD---RLADAYRVMEDMFKAGISP 335
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 78/188 (41%), Gaps = 18/188 (9%)
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
KP Y A+I+ R + +E+ +EM +R D +T++T+ L+ C+
Sbjct: 21 KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTI---------LKAYCQ 71
Query: 374 L--YDRMIE---GKF--VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ DR + GK P T +L+ C R+D L +I + P +
Sbjct: 72 IGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYN 131
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
L+ GLC G+ + A K ML R +Y L Q NA ++ L M K
Sbjct: 132 CLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKL--MEKMK 189
Query: 487 QAVLPPPT 494
++ L P T
Sbjct: 190 ESGLTPDT 197
>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 727
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/426 (24%), Positives = 182/426 (42%), Gaps = 48/426 (11%)
Query: 106 FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L R + D+ +E + + P+ T S+ L + KF LE F
Sbjct: 188 YSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKF------LEGFG 241
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++ I G+ F VL+ C + EAR +F ++++R + PN T L+ G+
Sbjct: 242 LVDEMIRRGL-DVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGY 300
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
G+V + + GF+ V TYN+ I GYCK G DA+R+F+EM R +P++
Sbjct: 301 CLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNI 360
Query: 283 QTITTLI-------------------HGAGLVRNI----------------HQARQLFDE 307
T +LI H +GL +I QA LF++
Sbjct: 361 VTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQ 420
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
+ + L PD+ +Y +I R + AM L+ +M K + VTY + GL +S
Sbjct: 421 LVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGR 480
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ +L + M +P T T +L+ +D + L+ +I RG P +
Sbjct: 481 ISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTI 540
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
++ G C R +EA ++M ++ +Y +L + ++ +N +I+++
Sbjct: 541 MIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSNSYEWKFVNVIRDIN 600
Query: 488 AVLPPP 493
PPP
Sbjct: 601 ---PPP 603
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/259 (23%), Positives = 110/259 (42%), Gaps = 9/259 (3%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S+F K+L R + + +N +L G +G V F+ E+V GF + V+Y I I+G
Sbjct: 93 SIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGL 152
Query: 258 CKKGCFGDAMRLFEEMERV------ACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMP 309
C+ G +A+ L +E+ + I L RN + + + ++EM
Sbjct: 153 CENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMM 212
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ P+ Y ++I L L+DEM + + + + GL K+ L
Sbjct: 213 GNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLV 272
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+++D M+ + P T LM +C+ VD+ L+ + + GF ++ +
Sbjct: 273 EAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFI 332
Query: 430 TGLCSRGRWEEAFECSKQM 448
G C GR +A +M
Sbjct: 333 HGYCKVGRVRDAVRVFDEM 351
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/401 (20%), Positives = 149/401 (37%), Gaps = 84/401 (20%)
Query: 174 RKFG--SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTA 230
R +G + N +L+ C + +A ++++ F+ N + IL+ G E+G V
Sbjct: 101 RGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNE 160
Query: 231 ------MEMFYHEMVLRGF--RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
M E GF + +VV Y+I ID C+ G + + EM P+
Sbjct: 161 AVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNE 220
Query: 283 QTITTLIHGA---------------------------------GLVRN--IHQARQLFDE 307
T +LI G GL +N + +AR++FDE
Sbjct: 221 FTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDE 280
Query: 308 MPKRNLKP-----------------------------------DIGAYNAMISSLIRCRD 332
M R +P D+ YN I +
Sbjct: 281 MVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGR 340
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A+ + DEM + + + VTY+++ L K+ + G ++ M P T +
Sbjct: 341 VRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCI 400
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ C + R+D + L+ L++ G P + +L+ G C+ R EA + M ++
Sbjct: 401 LLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKN 460
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+Y L L ++ ++ + R++ + P P
Sbjct: 461 LVPHIVTYSCLIDGLCRSG---RISNAWRLLNEMHVKGPLP 498
>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
Length = 691
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 145/309 (46%), Gaps = 8/309 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+L+T SM ++ + K E+ + FD M RE G+ G +N L+ +C
Sbjct: 218 PNLVTFNSM---VNGMCKAGKMEDARKVFDEMMRE---GLAPDGVS-YNTLVGGYCKAGC 270
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
EA SVF ++ + P+ T L+ ++G++ +M RG + + VT+
Sbjct: 271 SHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTA 330
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
IDG+CKKG DA+ M + PS+ LI+G +V + +AR+L EM +
Sbjct: 331 LIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKG 390
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
LKPD+ Y+ +IS+ + D ++A EL +M EK + D +TY ++ L + L
Sbjct: 391 LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAH 450
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L+ MI+ P T L+ C V+ L+L ++ G P +L+ GL
Sbjct: 451 VLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGL 510
Query: 433 CSRGRWEEA 441
R EA
Sbjct: 511 SKSARAMEA 519
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 79/307 (25%), Positives = 143/307 (46%), Gaps = 4/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++A C + KEA S+ + + PN T N L+ F +G+V E M+
Sbjct: 153 YNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMML 212
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P++VT+N ++G CK G DA ++F+EM R P + TL+ G H
Sbjct: 213 DGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSH 272
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F EM ++ + PD+ + ++I + + +L A+ L+ +M E+ + + VT+ +
Sbjct: 273 EALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALI 332
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K L+ M + + P L+ +C+ R+D L + +G
Sbjct: 333 DGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLK 392
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +++ C AFE ++QML + +Y L R L + ++L D
Sbjct: 393 PDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCE---EKRLSDA 449
Query: 480 DRMIKNL 486
+ KN+
Sbjct: 450 HVLFKNM 456
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 126/305 (41%), Gaps = 36/305 (11%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF E+ A R V + L PN T N ++ G ++G + + EM+
Sbjct: 188 YNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMM 247
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+YN + GYCK GC +A+ +F EM + +P + T T+LIH N+
Sbjct: 248 REGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLE 307
Query: 300 QARQLFDEMPKRNL-----------------------------------KPDIGAYNAMI 324
A L +M +R L KP + YNA+I
Sbjct: 308 WAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALI 367
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++ A EL+ EME K + D VTY T+ K+ +L +M+E +
Sbjct: 368 NGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVL 427
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L++ C R+ L+ +I G P L+ G C G E A
Sbjct: 428 PDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSL 487
Query: 445 SKQML 449
+M+
Sbjct: 488 HDKMV 492
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 64/276 (23%), Positives = 122/276 (44%), Gaps = 2/276 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+ P+ N +LL ++ +T+ F+ M+ G P+V TYNI I C +G +A+
Sbjct: 112 YVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEAL 170
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ +M C P++ T TL+ + A +L M LKP++ +N+M++ +
Sbjct: 171 SILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGM 230
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ + A ++ DEM + + D V+Y+T+ G K+ ++ M + +P
Sbjct: 231 CKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDV 290
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ C ++ + L + +RG + L+ G C +G ++A +
Sbjct: 291 VTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRG 350
Query: 448 MLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
M R + S Y ++ Y + +E E L M
Sbjct: 351 MRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEM 386
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 19/330 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C M EAR + ++ ++ P+ T + ++ + ++ D + +M+
Sbjct: 363 YNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQML 422
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +TY+ I C++ DA LF+ M ++ P T T+LI G N+
Sbjct: 423 EKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVE 482
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L D+M K + PD+ Y+ +I+ L + A +L+ ++ + N Y +
Sbjct: 483 RALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALM 542
Query: 360 FGLMKS------SGLEGVC---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
K+ + L+G C K+Y M++ + +L+ C V
Sbjct: 543 HCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVM 602
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML-VRRRQVSEASYRML 463
L+ ++ RGF P+ + L+ GL G EA + +Q+L +EAS ++
Sbjct: 603 KALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASKALI 662
Query: 464 QRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
L + N + L+ L M K+ +LP P
Sbjct: 663 DLNLNEGNVDAVLDVLHGMAKD--GLLPSP 690
>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
mitochondrial-like [Glycine max]
Length = 477
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 141/299 (47%), Gaps = 1/299 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L+ FC + A SVF +L R + P+ T+N L+ G G++ F+ ++V
Sbjct: 132 NILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVA 191
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+GF+ V+Y I+G CK G RL ++E + P + TT+IH + +
Sbjct: 192 QGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGD 251
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L+ EM + + P++ YN +I +L A L++EM+ K I D T++ +
Sbjct: 252 ACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILID 311
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K ++ L++ M P T L+ C N ++ + L + ++G P
Sbjct: 312 ALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 371
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++ +L+ LC GR E A + + +LV+ ++ +Y ++ L +A + DL
Sbjct: 372 DVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 430
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 84/185 (45%), Gaps = 1/185 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC +KEA S+ ++ L P+ T NIL+ + G + + EM
Sbjct: 271 YNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMK 330
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P++VTY IDG CK A+ L ++M+ P + + T L+ +
Sbjct: 331 HKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLE 390
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+Q F + + ++ YN MI+ L + M+L +ME K D +T+ T+
Sbjct: 391 NAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450
Query: 360 FGLMK 364
L +
Sbjct: 451 CALFE 455
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 91/199 (45%), Gaps = 2/199 (1%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+ LF++ + P+L T+ LI+ + +I A +F + KR PD N +I
Sbjct: 112 VISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIK 171
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV- 384
L C ++ A+ D++ + D V+Y T+ GL K+ + V +L R +EG V
Sbjct: 172 GLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLL-RKLEGHSVK 230
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P ++ C N RV +L+ +I +G P+ + L+ G C G +EAF
Sbjct: 231 PDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSL 290
Query: 445 SKQMLVRRRQVSEASYRML 463
+M ++ ++ +L
Sbjct: 291 LNEMKLKNINPDVYTFNIL 309
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 98/233 (42%), Gaps = 1/233 (0%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL K +T + +F + G P++ T NI I+ +C A +F + +
Sbjct: 98 NILSSLVKNKHYLTVISLF-KQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILK 156
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P T+ TLI G I +A D++ + + D +Y +I+ L + + A
Sbjct: 157 RGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKA 216
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
L+ ++E + D V Y T+ L K+ + C LY MI P T L+
Sbjct: 217 VARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIY 276
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
FC+ + +L + + P + ++L+ L G+ +EA ++M
Sbjct: 277 GFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEM 329
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 59/133 (44%), Gaps = 2/133 (1%)
Query: 354 TYH--TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
T+H + L+K+ V L+ + P T+ +L+ FC + +++
Sbjct: 93 TFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFA 152
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++ RG+ P L+ L+ GLC G + A +++ + Q+ + SY L L +A
Sbjct: 153 NILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAG 212
Query: 472 ANEKLEDLDRMIK 484
+ + L R ++
Sbjct: 213 ETKAVARLLRKLE 225
>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g41170, mitochondrial; Flags: Precursor
gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 527
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 102/414 (24%), Positives = 186/414 (44%), Gaps = 43/414 (10%)
Query: 82 NGLKALEFFKFTLQHPHFT-----PTPDAFEKTLHILARMRYFDQAWELMSHVQ------ 130
NGL +L+F + H P+ F K L+++A+M+ FD L H+Q
Sbjct: 46 NGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSH 105
Query: 131 --------------RTHPSLLTL---KSMSI--------MLSRISKFQSYEETLEAFDRM 165
+ P L + K M + S I+ F EA +
Sbjct: 106 DLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMV 165
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKE 224
+ + +GI+ + ++ + C + A S+F ++ + P+ L+ G
Sbjct: 166 NQMVEMGIKP-DVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCN 224
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG + M R +P V+T+N ID + K+G F DA L+ EM R++ P++ T
Sbjct: 225 SGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFT 284
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T+LI+G + + +ARQ+F M + PD+ AY ++I+ +C+ ++ AM++ EM
Sbjct: 285 YTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMS 344
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+K + + +TY T+ G + +++ M+ P RT +L+ C N +V
Sbjct: 345 QKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVK 404
Query: 405 LGLNLWGYLIDR---GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
L ++ + R G P+ ++L+ GLC G+ E+A + M R+R++
Sbjct: 405 KALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDM--RKREM 456
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 95/399 (23%), Positives = 165/399 (41%), Gaps = 19/399 (4%)
Query: 75 RLFAAHSNGL------KALEF---FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
R F H N L KAL F + F + LH L F++A +L
Sbjct: 4 RFFQLHRNRLVKGNSGKALSFSRLLDLSFWVRAFCNYREILRNGLHSLQ----FNEALDL 59
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
+H+ + P L ++ + +L+ I+K + ++ + D ++ +G+ N+L+
Sbjct: 60 FTHMVESRP-LPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ---IMGVSH-DLYTCNLLM 114
Query: 186 QAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
FC + A S K++ F P+ T L+ GF + ++MV G +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIK 174
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VV Y ID CK G A+ LF++ME P + T+L++G A L
Sbjct: 175 PDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
M KR +KPD+ +NA+I + ++ A EL +EM I + TY ++ G
Sbjct: 235 LRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCM 294
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
++ +++ M P L+ FC +VD + ++ + +G +
Sbjct: 295 EGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTIT 354
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L+ G G+ A E M+ R + +Y +L
Sbjct: 355 YTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVL 393
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/347 (24%), Positives = 154/347 (44%), Gaps = 16/347 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
+T D+ K H+ + FDQ P ++ S+ L +++ +
Sbjct: 180 YTTIIDSLCKNGHVNYALSLFDQMENY-----GIRPDVVMYTSLVNGLCNSGRWRDADSL 234
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
L + R+I K FN L+ AF + + +A ++ +++ APN T
Sbjct: 235 LRGMTK--RKI-----KPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF G V ++ M +G P VV Y I+G+CK DAM++F EM +
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T TTLI G G V + A+++F M R + P+I YN ++ L + A+
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407
Query: 338 ELMDEMEEKR---IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ ++M+++ + + TY+ + GL + LE +++ M + + T +++
Sbjct: 408 MIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIII 467
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ C +V +NL+ L +G P+ +++GL G EA
Sbjct: 468 QGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEA 514
>gi|15239018|ref|NP_196692.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174149|sp|Q9LFM6.1|PP375_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At5g11310, mitochondrial; Flags: Precursor
gi|8953393|emb|CAB96666.1| putative protein [Arabidopsis thaliana]
gi|110738090|dbj|BAF00978.1| hypothetical protein [Arabidopsis thaliana]
gi|332004275|gb|AED91658.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 97/411 (23%), Positives = 187/411 (45%), Gaps = 16/411 (3%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLS 147
FK+ P FT +P F+ ++ L + R F+ AW L+ R+ +L++ + +++
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVVNSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLL 205
R ++ ++ + AF+ + + K +E VLL A C + ++EA S++++ +
Sbjct: 182 RYARAGMVQQAIRAFEFARS--YEPVCKSATELRLLEVLLDALCKEGHVREA-SMYLERI 238
Query: 206 -----SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
S + P+ + NILL G+ S + E + EM +P+VVTY I+GYC+
Sbjct: 239 GGTMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM 298
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
AM + EEM+ + +I G G + +A + + P I Y
Sbjct: 299 RRVQIAMEVLEEMKMAEMEINFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY 358
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N+++ + + DL A +++ M + + TY+ F K + E LY ++IE
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVDPTTTTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T +++K C + ++ L + + + +RG P +L+ LC EE
Sbjct: 419 AGHSPDRLTYHLILKMLCEDGKLSLAMQVNKEMKNRGIDPDLLTTTMLIHLLCRLEMLEE 478
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
AFE + R +++M+ L ++ + D+ + + +L + LP
Sbjct: 479 AFEEFDNAVRRGIIPQYITFKMIDNGL----RSKGMSDMAKRLSSLMSSLP 525
>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
[Oryza sativa Japonica Group]
Length = 571
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 100/432 (23%), Positives = 175/432 (40%), Gaps = 40/432 (9%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
L+ ++L A S L+A + F + HP P+ + L L + D A +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179
Query: 127 SHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEE 180
+R P + T ++ L RI + R ++ I+ +G
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQL-----------RKAGDVAKDIKAWGLAPSVAT 228
Query: 181 FNVLLQAFCTQ-------------KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
+N L+ +C + KEM EA +P T +L+ G+ ++ +
Sbjct: 229 YNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG---------ISPTAVTFGVLINGYCKNSN 279
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
A + EM +G SVVTYN I G C +G + ++L EEME + P+ T
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G + A D M +RN++PD+ YN +I R + AM + + M +K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + TY+ + G +S L D M E T +L+ C V +
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L + + G P+ + ++ G C +G + A+E +M R++ + +Y + +Y
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 468 VQANANEKLEDL 479
Q ++ DL
Sbjct: 520 CQIGKMDEANDL 531
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 146/313 (46%), Gaps = 13/313 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T + ++++ K + + F+ M+++ GI +N L+ C++ +++E
Sbjct: 263 TAVTFGVLINGYCKNSNTAAAVRVFEEMKQQ---GIAA-SVVTYNSLISGLCSEGKVEEG 318
Query: 198 RSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
VKL+ +PN T +L GF + G + + M R P VV YNI
Sbjct: 319 ----VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNI 374
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
ID Y + G DAM + E M + P++ T LI G + A L DEM ++
Sbjct: 375 LIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKG 434
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++ D+ YN +I +L ++ A++L+DEM E + +++TY+T+ G ++
Sbjct: 435 IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAY 494
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++ RM + + T + +K+FC ++D +L ++D+ P+G + + G+
Sbjct: 495 EIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGM 554
Query: 433 CSRGRWEEAFECS 445
+G + C+
Sbjct: 555 MEKGYTPDIRGCT 567
>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12300, mitochondrial; Flags: Precursor
gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 637
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 153/343 (44%), Gaps = 8/343 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P + L+++ + A EL+ ++ + L +K SI++ + K S +
Sbjct: 226 PNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKHGSLDNAFN 284
Query: 161 AFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
F+ ME + I I + N+L+ FC + + ++ R PN T ++L
Sbjct: 285 LFNEMEMKGITTNIITY-----NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 339
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ F + G + E + EM+ RG P +TY IDG+CK+ A ++ + M C
Sbjct: 340 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 399
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+++T LI+G I +LF +M R + D YN +I LN A E
Sbjct: 400 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 459
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L EM +++ + VTY + GL + E ++++++ + K +++ C
Sbjct: 460 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 519
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+VD +L+ L +G P ++++ GLC +G EA
Sbjct: 520 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEA 562
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 103/426 (24%), Positives = 178/426 (41%), Gaps = 42/426 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F+ + H PT F + +A+ + +D L ++ + L ++SIM
Sbjct: 72 AIDLFR-DMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIM 129
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
I+ F + AF M + I +G + F+ L+ C + + EA + +++
Sbjct: 130 ---INCFCRCRKLCLAFSAMGKIIKLGYEP-NTITFSTLINGLCLEGRVSEALELVDRMV 185
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY-------------- 250
P+ T+N L+ G SG + +MV G +P+ VTY
Sbjct: 186 EMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTA 245
Query: 251 ---------------------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+I IDG CK G +A LF EME ++ T LI
Sbjct: 246 LAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILI 305
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G +L +M KR + P++ ++ +I S ++ L A EL EM + I
Sbjct: 306 GGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIA 365
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D +TY ++ G K + L+ ++ D M+ P RT +L+ +C R+D GL L
Sbjct: 366 PDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + RG + L+ G C G+ A E ++M+ R+ + +Y++L L
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 470 ANANEK 475
+EK
Sbjct: 486 NGESEK 491
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 97/218 (44%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ +C + + +F K+ L + T N L+ GF E G + + + EMV
Sbjct: 406 FNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMV 465
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P++VTY I +DG C G A+ +FE++E+ + +IHG +
Sbjct: 466 SRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVD 525
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP + YN MI L + L+ A L +MEE D TY+ +
Sbjct: 526 DAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILI 585
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ KL + + F T+ M++
Sbjct: 586 RAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/384 (20%), Positives = 171/384 (44%), Gaps = 10/384 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSH-VQRTH-PSLLTLKSMSIMLSRISKFQSYE 156
+ P F ++ L +A EL+ V+ H P L+T+ ++ ++
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTL------VNGLCLSG 207
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ EA +++ + G + + + +L C + A + K+ R +
Sbjct: 208 KEAEAMLLIDKMVEYGCQP-NAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKY 266
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+I++ G + G + ++EM ++G +++TYNI I G+C G + D +L +M +
Sbjct: 267 SIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIK 326
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T + LI + +A +L EM R + PD Y ++I + L+
Sbjct: 327 RKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDK 386
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +++D M K + T++ + G K++ ++ +L+ +M V T T L++
Sbjct: 387 ANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC ++++ L+ ++ R P+ +L+ GLC G E+A E +++ + ++
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMEL 506
Query: 456 SEASYRMLQRYLVQANANEKLEDL 479
Y ++ + A+ + DL
Sbjct: 507 DIGIYNIIIHGMCNASKVDDAWDL 530
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 146/328 (44%), Gaps = 10/328 (3%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
R+ D A L ++R +P+++T S+++ K E E M I GI
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTF---SVLIDSFVKEGKLREAEELHKEM---IHRGIAP 366
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMF 234
+ + L+ FC + + +A + ++S+ PN +T NIL+ G+ ++ +
Sbjct: 367 -DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLEL 425
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +M LRG VTYN I G+C+ G A LF+EM P++ T L+ G
Sbjct: 426 FRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCD 485
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+A ++F+++ K ++ DIG YN +I + ++ A +L + K + T
Sbjct: 486 NGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKT 545
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ M GL K L L+ +M E P T +L++ + + L L
Sbjct: 546 YNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 605
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAF 442
GF + +++ L S GR +++F
Sbjct: 606 RCGFSVDASTIKMVIDML-SDGRLKKSF 632
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 84/199 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF +M LP++ + L + L +M + + ++ + MI
Sbjct: 71 DAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLSIMI 130
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RCR L A M ++ + + +T+ T+ GL + +L DRM+E
Sbjct: 131 NCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHK 190
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T+ L+ C++ + + L +++ G P+ ++ +C G+ A E
Sbjct: 191 PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMEL 250
Query: 445 SKQMLVRRRQVSEASYRML 463
++M R ++ Y ++
Sbjct: 251 LRKMEERNIKLDAVKYSII 269
>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 729
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/351 (25%), Positives = 157/351 (44%), Gaps = 10/351 (2%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISK 151
+Q P + + + ++A+ELM+ + + P + T ++ ++ + K
Sbjct: 261 VQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTV---INGLCK 317
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
YE E F M R G+ S + LL C + ++ E VF + SR P
Sbjct: 318 HGKYERAKEVFAEMLRS---GLSP-DSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVP 373
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + ++ F SG++ M+++ + G P V Y I I GYC+KG AM L
Sbjct: 374 DLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLR 433
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EM + C + T T++HG + + +A +LF+EM +R L PD +I +
Sbjct: 434 NEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKL 493
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+L AMEL +M+EKRI D VTY+T+ G K ++ +++ M+ + +P +
Sbjct: 494 GNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISY 553
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+L+ C + +W +I + P + ++ G C G +
Sbjct: 554 SILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 165/379 (43%), Gaps = 14/379 (3%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPH--FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT- 132
L +A+S+ E F+ P F+P + ++ L + +++A E+ + + R+
Sbjct: 276 LISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSG 335
Query: 133 -HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCT 190
P T +S+ L K ET + F M R++ + F S ++ F
Sbjct: 336 LSPDSTTYRSL---LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSS-----MMSLFTR 387
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+ +A F + + P+N IL+ G+ G ++ +EM+ +G VVT
Sbjct: 388 SGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVT 447
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN + G CK+ G+A +LF EM A P T+T LI G + N+ A +LF +M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMK 507
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
++ ++ D+ YN ++ + D++ A E+ +M K I ++Y + L L
Sbjct: 508 EKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLA 567
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+++D MI P ++K +C + G + +I GF P + + L+
Sbjct: 568 EAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLI 627
Query: 430 TGLCSRGRWEEAFECSKQM 448
G +AF K+M
Sbjct: 628 YGFVREENMSKAFGLVKKM 646
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 134/275 (48%), Gaps = 5/275 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+N +L C +K + EA +F ++ R P++ T+ IL+ G + G++ AME+F +M
Sbjct: 448 YNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELF-QKM 506
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ R VVTYN +DG+ K G A ++ +M LP+ + + L++ ++
Sbjct: 507 KEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHL 566
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +++DEM +N+KP + N+MI R + + +++M + D ++Y+T+
Sbjct: 567 AEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTL 626
Query: 359 FFGLMKSSGLEGVCKLYDRMIE--GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+G ++ + L +M E G VP T ++ FC ++ + +I+R
Sbjct: 627 IYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIER 686
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
G P ++ G S+ EAF +ML R
Sbjct: 687 GVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQR 721
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/349 (22%), Positives = 150/349 (42%), Gaps = 11/349 (3%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
LF N KAL +F +++ P + + R A L + + +
Sbjct: 384 LFTRSGNLDKALMYFN-SVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQ-QGC 441
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ + + + +L + K + E + F+ M ER +F S +L+ C +
Sbjct: 442 AMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPD-----SYTLTILIDGHCKLGNL 496
Query: 195 KEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ A +F K+ R + T N LL GF + GD+ + + +MV + P+ ++Y+I
Sbjct: 497 QNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSIL 556
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
++ C KG +A R+++EM P++ ++I G N ++M
Sbjct: 557 VNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF 616
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG--HDNVTYHTMFFGLMKSSGLEGV 371
PD +YN +I +R +++ A L+ +MEE++ G D TY+++ G + + ++
Sbjct: 617 VPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEA 676
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +MIE P T ++ F + + ++ RGF P
Sbjct: 677 EVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 93/414 (22%), Positives = 169/414 (40%), Gaps = 28/414 (6%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILAR 115
HL + PL+ V VL R + G + ++ F P+F T + +HIL R
Sbjct: 71 NHLIRLNPLA---VVEVLYRCRNDLTLGQRFVDQLGF--HFPNFKHTSLSLSAMIHILVR 125
Query: 116 M-RYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD----------- 163
R D L+ ++R+ S L I+ S S F + FD
Sbjct: 126 SGRLSDAQSCLLRMIRRSGVSRL-----EIVNSLDSTFSNCGSNDSVFDLLIRTYVQARK 180
Query: 164 -RMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
R E F +R G + N L+ + ++ A V+ ++ S N T+NI
Sbjct: 181 LREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNI 240
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ + G + + F ++ +G P +VTYN I Y KG +A L M
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T T+I+G +A+++F EM + L PD Y +++ + D+
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ +M + + D V + +M +S L+ ++ + E +P +L++ +
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C + + +NL ++ +G + ++ GLC R EA + +M R
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 89/175 (50%), Gaps = 3/175 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ A C++ + EA V+ +++S+ P N ++ G+ SG+ + E F +M+
Sbjct: 553 YSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMI 612
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME--RVACLPSLQTITTLIHGAGLVRN 297
GF P ++YN I G+ ++ A L ++ME + +P + T +++HG
Sbjct: 613 SEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQ 672
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A + +M +R + PD Y MI+ + +L A + DEM ++ D+
Sbjct: 673 MKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 598
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/325 (27%), Positives = 153/325 (47%), Gaps = 12/325 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-----SRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
+NVL+ C + + EA +K L S PN T NI+L +G E
Sbjct: 277 YNVLVNGICKEGRLDEA----IKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M+ +GF PSVVT+NI I+ C+KG G A+ + E+M + C P+ + L+HG
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKE 392
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + +A + + M R PDI YN M+++L + + A+E+++++ K +TY
Sbjct: 393 KKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITY 452
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ GL K+ KL D M P T T L+ +VD + +
Sbjct: 453 NTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFER 512
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANE 474
G P+ + ++ GLC + + A + M+ R + +E SY +L L + A E
Sbjct: 513 MGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKE 572
Query: 475 KLEDLDRMIKNLQAVLPPPTRQQVA 499
LE L+ + + ++ + +QVA
Sbjct: 573 ALELLNELCN--KGLMKKSSAEQVA 595
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/383 (22%), Positives = 167/383 (43%), Gaps = 19/383 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHI-----LARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
E FKF + PD T I L + R + E++ P ++T
Sbjct: 120 EGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV-PDVITY--- 175
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++M+S K L DRM V +N +L++ C ++K+A V
Sbjct: 176 NVMISGYCKAGEINNALSVLDRMSVSPDV-------VTYNTILRSLCDSGKLKQAMEVLD 228
Query: 203 KLLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++L R P+ T IL+ ++SG AM++ EM RG P VVTYN+ ++G CK+
Sbjct: 229 RMLQRDCYPDVITYTILIEATCRDSGVGHAMKLL-DEMRDRGCTPDVVTYNVLVNGICKE 287
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A++ +M C P++ T ++ A +L +M ++ P + +
Sbjct: 288 GRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTF 347
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N +I+ L R L A++++++M + ++++Y+ + G K ++ + +RM+
Sbjct: 348 NILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVS 407
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T ++ C + +V+ + + L +G P + ++ GL G+ +
Sbjct: 408 RGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGK 467
Query: 441 AFECSKQMLVRRRQVSEASYRML 463
A + +M + + +Y L
Sbjct: 468 AIKLLDEMRAKDLKPDTITYSSL 490
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 115/264 (43%), Gaps = 3/264 (1%)
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
S FA + N L +G++ F MV G P ++ I G+C+ G
Sbjct: 96 SSFALEDVESNNHLRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRK 155
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A ++ E +E +P + T +I G I+ A + D M ++ PD+ YN ++
Sbjct: 156 AAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILR 212
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
SL L AME++D M ++ D +TY + + SG+ KL D M + P
Sbjct: 213 SLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTP 272
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T +L+ C R+D + + G P+ ++++ +CS GRW +A +
Sbjct: 273 DVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLL 332
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQ 469
ML + S ++ +L +L +
Sbjct: 333 ADMLRKGFSPSVVTFNILINFLCR 356
>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g61400-like [Vitis vinifera]
Length = 665
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/388 (25%), Positives = 167/388 (43%), Gaps = 13/388 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS NV G L A S + +E + P A L L + FD W+
Sbjct: 121 SSKFTPNVFGVLIIAFSE-MGLVEEALWVYYKMDVLPAMQACNMVLDGLVKKGRFDTMWK 179
Query: 125 LMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEF 181
+ + + P+++T ++ R F + FD M E++IF + +
Sbjct: 180 VYGDMVARGASPNVVTYGTLIDGCCRQGDFL---KAFRLFDEMIEKKIFPTVVIY----- 231
Query: 182 NVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+L++ C + + EA S+F + S PN T N ++ G+ + V Y EM+
Sbjct: 232 TILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLG 291
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+VVT+ I IDG CK A + +M +P++ LI G N+ +
Sbjct: 292 DGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSE 351
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L E+ K + PD+ Y+ +I L + A L+ EM++K + VTY+T+
Sbjct: 352 ALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLID 411
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K +E ++ +M E P T L+ +C +++ + L+ ++ +G P
Sbjct: 412 GYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLP 471
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
A L+ G G +EAF K+M
Sbjct: 472 DVVAYTALIDGHFKDGNTKEAFRLHKEM 499
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 100/399 (25%), Positives = 160/399 (40%), Gaps = 56/399 (14%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+ALE F + P + +H+L + + +A LM + + +
Sbjct: 52 QALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQN--------- 102
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
SR S+ R+E KF F VL+ AF ++EA V+ K+
Sbjct: 103 --SRRSRICC--SVFNVLSRLESS------KFTPNVFGVLIIAFSEMGLVEEALWVYYKM 152
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P + N++L G + G M Y +MV RG P+VVTY IDG C++G F
Sbjct: 153 --DVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A RLF+EM P++ T LI G I +A +F M + P++ YN M+
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG----------------- 367
+ + A+EL EM + + VT+ + GL K+
Sbjct: 271 DGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVV 330
Query: 368 ---------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
++G CK L+ + + + +P T +L+K C R++ L
Sbjct: 331 PNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGL 390
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ +GF P+ + L+ G C G E+A E QM
Sbjct: 391 LQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQM 429
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 156/373 (41%), Gaps = 22/373 (5%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
LKA F ++ F PT + + L +A E M R L L + +
Sbjct: 210 LKAFRLFDEMIEKKIF-PTVVIYTILIRGLCGESRISEA-ESMFRTMRNSGMLPNLYTYN 267
Query: 144 IMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
M+ K ++ LE + M + + + FG +L+ C EM AR +
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFG-----ILIDGLCKTDEMVSARKFLI 322
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ S PN N L+ G+ ++G+++ + E+ P V TY+I I G C
Sbjct: 323 DMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVD 382
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A L +EM++ LP+ T TLI G N+ +A ++ +M ++ ++P+I ++
Sbjct: 383 RMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFS 442
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + + AAM L EM K + D V Y + G K + +L+ M E
Sbjct: 443 TLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEA 502
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLW------------GYLIDRGFCPHGHAL-DLL 428
P T+ L+ C + R+ + L+ +DR C H + L
Sbjct: 503 GLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTAL 562
Query: 429 VTGLCSRGRWEEA 441
+ GLC+ GR +A
Sbjct: 563 IQGLCTDGRIFKA 575
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 74/330 (22%), Positives = 128/330 (38%), Gaps = 56/330 (16%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
KF + F P+ F I + +A L S +++ H L + + SI++
Sbjct: 319 KFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK-HEILPDVFTYSILIKG 377
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ EE M+++ F+ + +N L+ +C + M++A V ++ +
Sbjct: 378 LCGVDRMEEADGLLQEMKKKGFLP----NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKG 433
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY---------- 257
PN T + L+ G+ ++G + A Y EMV++G P VV Y IDG+
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493
Query: 258 -------------------------CKKGCFGDAMRLF-------------EEMERVACL 279
CK G DA++LF E++R C
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCS 553
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T LI G I +A + F +M L+PD+ +I R L M L
Sbjct: 554 PNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMML 613
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
++ + I ++ Y + G +S L+
Sbjct: 614 QADILKMGIIPNSSVYRVLAKGYEESGYLK 643
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 64/140 (45%)
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K ++ P + A N ++ L++ + ++ +M + + VTY T+ G +
Sbjct: 151 KMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFL 210
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L+D MIE K P +L++ C R+ +++ + + G P+ + + ++
Sbjct: 211 KAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMM 270
Query: 430 TGLCSRGRWEEAFECSKQML 449
G C ++A E ++ML
Sbjct: 271 DGYCKIAHVKKALELYQEML 290
>gi|297807171|ref|XP_002871469.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317306|gb|EFH47728.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 602
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 187/411 (45%), Gaps = 16/411 (3%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLS 147
FK+ P FT +P F+ ++ L + R F+ AW L+ R+ +L++ + +++
Sbjct: 122 FKWAEMKPGFTLSPSLFDSVINSLCKAREFEIAWSLVFDRVRSDEGSNLVSADTFIVLIR 181
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVK-- 203
R ++ ++ + AF+ + + K SE VLL A C + ++EA SV+++
Sbjct: 182 RYARAGMVQQAIRAFEFARS--YEPVCKSASELKLLEVLLDALCKEGYVREA-SVYLERR 238
Query: 204 ---LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ S + P+ + NILL G+ S + E + EM +P+VVTY I+GYC+
Sbjct: 239 RGMMDSNWVPSVRIFNILLNGWFRSRKLKQAEKLWEEMKAMNVKPTVVTYGTLIEGYCRM 298
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
AM + EEM+ + +I G G + +A + + P I Y
Sbjct: 299 RRVEIAMEILEEMKMAEMELTFMVFNPIIDGLGEAGRLSEALGMMERFFVCESGPTIVTY 358
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N+++ + + DL A +++ M + + TY+ F K + E LY ++IE
Sbjct: 359 NSLVKNFCKAGDLPGASKILKMMMTRGVEPTTSTYNHFFKYFSKHNKTEEGMNLYFKLIE 418
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T +++K C + ++ L + + + +RG P +L+ LC EE
Sbjct: 419 AGHSPDRLTYHLILKMLCEDGKLSLAIQVNKEMKNRGIDPDLLTTTMLMHLLCRLDMLEE 478
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
AFE + R +++M+ L ++ + D+ + + +L + LP
Sbjct: 479 AFEEFDNAVRRGIIPQYITFKMIDNGL----RSKGMTDMAKRLSSLMSSLP 525
>gi|224107981|ref|XP_002314676.1| predicted protein [Populus trichocarpa]
gi|222863716|gb|EEF00847.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 108/478 (22%), Positives = 208/478 (43%), Gaps = 18/478 (3%)
Query: 11 DKFPGISDR---LALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSST 67
DK+P I +L + S+ ++ I+ H + + L + +S+T
Sbjct: 82 DKYPNIESHKNIASLSLLSEASDSDAHKVGEILKKHYLSEDAVVEAL-----NESGISAT 136
Query: 68 --LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
LV +L R + L AL F + + P+ + + IL + R F W+L
Sbjct: 137 HDLVSQLLKRF---SNQWLIALGVFIWAKNQTGYVHKPEIYNSMIDILGKSRKFSLMWDL 193
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
+ + + ++L +M ++ R+ + Y E ++AF +E+ G+ K +E NVL+
Sbjct: 194 VQEMSGLN-GYVSLVTMGKVMKRLVRDGKYNEAIDAFRGLEK---FGLSK-STEAMNVLM 248
Query: 186 QAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+++AR+V ++ + ++ NIL G+ ++ EM RGF P
Sbjct: 249 DILARNGRVEDARAVALEFEGCLTLDYRSYNILSSGYCKARMFGDARKTMEEMEERGFHP 308
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+VV+Y I+ Y ++ F + + EM+ C P L T T I G R I++A ++
Sbjct: 309 NVVSYTAFIEAYGEQKDFRNVEIILNEMQEKGCPPDLITYTVYIRALGKARQINKALEIC 368
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+E+ + Y ++I SL L A + +++E++ +G D Y M
Sbjct: 369 EEIKRNGFVLGTQFYCSLIHSLCLSGRLKDAWNIFEDVEKQGVGRDLGMYKAMISAACAL 428
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
S E KL +M E P +T L+K C + + L ++ +
Sbjct: 429 SQDESALKLLHKMEEDSCKPDVQTYAPLLKMCCRKKSMKMLKFLLNHMFENDVSIDIVTY 488
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
DLLV GL +G+ + A ++ +++ + +Y++L L + N E +++++
Sbjct: 489 DLLVHGLRKQGKLKYACFFFQEAVLKGMVPCDKTYKILLEELERKNMAEMKGKIEKLM 546
>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
Length = 609
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/376 (25%), Positives = 169/376 (44%), Gaps = 16/376 (4%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLL 185
Q+T +L S + K + ++ D M R GS+ +NVL+
Sbjct: 73 QQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEM--------RNKGSKPDVVTYNVLI 124
Query: 186 QAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
C + + EA + S PN T NI+L +G E +M+ +G
Sbjct: 125 NGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCS 184
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
PSVVT+NI I+ C++G G A+ + E+M C P+ + L+HG + + +A +
Sbjct: 185 PSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEY 244
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
D M R PDI YN ++++L + ++ A+E+++++ K +TY+T+ GL K
Sbjct: 245 LDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSK 304
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
E KL D M P T L+ +VD + + L G P+
Sbjct: 305 VGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAIT 364
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDRMI 483
+ ++ GLC + + A + M+ +R + +EA+Y +L + + A E L+ L+ +
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 424
Query: 484 KNLQAVLPPPTRQQVA 499
+ ++ + +QVA
Sbjct: 425 S--RGLVKKSSAEQVA 438
>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g28010-like [Vitis vinifera]
Length = 728
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 144/318 (45%), Gaps = 4/318 (1%)
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
FGS + L++ F ++ + V +L R F N MNI+L G +G V
Sbjct: 109 FGS--LSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
EM + P +V+YN I+G CK +A+ L EME C P+ T TTL+ G
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCK 226
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +A +L + M K+ D+ Y +IS +L+ EL DEM K I + VT
Sbjct: 227 DGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVT 286
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + GL + + + + M E P T L+ C + R ++L ++
Sbjct: 287 YSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMV 346
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANAN 473
++G P ++L++GLC G +AF+ + M+ + ++ +Y L + L + +
Sbjct: 347 EKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVD 406
Query: 474 EKLEDLDRMIKNLQAVLP 491
E L+ + M N + P
Sbjct: 407 EALKLFNSMFDNENCLEP 424
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 9/315 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N L+ C K++KEA + +++ + PN+ T L+ G + G + AME+ M
Sbjct: 182 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL-EAM 240
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+GF VV Y I G+C G LF+EM ++ T + L+HG +
Sbjct: 241 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQW 300
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYH 356
+A + + M + + PD+ Y +I L C+D A AM+L++ M EK NVTY+
Sbjct: 301 KEANTVLNAMAEHGIHPDVVTYTGLIDGL--CKDGRATHAMDLLNLMVEKGEEPSNVTYN 358
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K + K+ MIE T LMK C +VD L L+ + D
Sbjct: 359 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 418
Query: 417 GFC--PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
C P+ ++L+ GLC GR +A + ++M+ + + +Y ML ++A +
Sbjct: 419 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 478
Query: 475 KLEDLDRMIKNLQAV 489
+ +L + + +L V
Sbjct: 479 EAMELWKQVLDLGFV 493
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N L++ C + ++ EA +F + PN T N+L+ G + G +T + +
Sbjct: 392 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 451
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV +G ++VTYN+ + G K G +AM L++++ + +P+ T + LI G +R
Sbjct: 452 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 511
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
++ A+ LF EM L P + YN +++SL + L A L EM D ++++T
Sbjct: 512 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 571
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M G +K+ + V +L +M+E P T L+ +D + ++ G
Sbjct: 572 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 631
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
F P D L+ GL S+G E QM +
Sbjct: 632 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 665
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 102/243 (41%), Gaps = 35/243 (14%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-- 291
+H + PS T N +D + +G A ++ M V LPS +++ LI
Sbjct: 61 LFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFA 120
Query: 292 -------------------------------AGLVRN--IHQARQLFDEMPKRNLKPDIG 318
GL RN + +A L EM ++++ PDI
Sbjct: 121 DAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIV 180
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+YN +I+ L + + L A+ L+ EME ++VT T+ GL K ++ +L + M
Sbjct: 181 SYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAM 240
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ F L+ FC N +D G L+ ++ +G + LV GLC G+W
Sbjct: 241 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQW 300
Query: 439 EEA 441
+EA
Sbjct: 301 KEA 303
>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
Length = 649
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 175/435 (40%), Gaps = 54/435 (12%)
Query: 103 PDAFEKTLHILARMRY--FDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
PD + I AR R D A L+ + P ++T S+ L + K + +++
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSV---LKGLCKHRRFDKA 246
Query: 159 LEAFDRMER-EIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR------------------S 199
E F M++ + +R F N+L+ FC E+KEA S
Sbjct: 247 KEVFRTMDQCSVAPDVRSF-----NILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFS 301
Query: 200 VFVKLLSR------------------FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+ L SR P+ +++ GF +G ++ EMV
Sbjct: 302 CLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGF 361
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P VVTYN ++G CK+ DA +L EME P L T TTLIHG N A
Sbjct: 362 GCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENA 421
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
QLFD + ++ L+PD+ YN++I + R DL A EL D+M + I +++TY +
Sbjct: 422 LQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDS 481
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ +E D M++ +P RT ++K +C + V G + P
Sbjct: 482 HCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPD 541
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM-LQRYLVQANANEKLEDLD 480
+ L+ G AF M + +Y M + + Q N ++D
Sbjct: 542 LITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGN----MQDAG 597
Query: 481 RMIKNLQAVLPPPTR 495
R+ K + P R
Sbjct: 598 RVFKGMGDSGIEPDR 612
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/385 (22%), Positives = 167/385 (43%), Gaps = 10/385 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
TP P F+ + + R +A+E + H + + + +L+ +S+
Sbjct: 84 TPQPQVFDLLIRTYTQSRKPREAFEAF-RLLLDHRVPVPASASNALLAVLSRAGWPHLAQ 142
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNIL 218
EA+ R + + + N+++ ++C E A +V ++ R P+ T N+L
Sbjct: 143 EAY----RLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVL 198
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ +GDV A M RG +P +VTYN + G CK F A +F M++ +
Sbjct: 199 IDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSV 258
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P +++ LI G V + +A + + EM R + PD+ +++ +I R +++ A
Sbjct: 259 APDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGA 318
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ EM+ + D V Y + G ++ + ++ D M+ +P T L+ C
Sbjct: 319 YLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLC 378
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
R+ L + +RG P L+ G C +G +E A + +L +R +
Sbjct: 379 KQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVV 438
Query: 459 SYRMLQRYLVQ----ANANEKLEDL 479
+Y L + + A ANE +D+
Sbjct: 439 TYNSLIDGMCRKGDLAKANELWDDM 463
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ +C Q + A +F LL R P+ T N L+ G GD+ + +M
Sbjct: 405 FTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMH 464
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P+ +TY+I ID +C+KG DA +EM + LP+++T ++I G N+
Sbjct: 465 AREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVK 524
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +Q +M + N+ PD+ +N +I I+ +++ A + + ME++ + D VTY+ +
Sbjct: 525 KGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMII 584
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + ++ +++ M + P T + L+ L +I RGF
Sbjct: 585 NGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFA 644
Query: 420 P 420
P
Sbjct: 645 P 645
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 159/375 (42%), Gaps = 21/375 (5%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A++F+K +QH + TP +F + + +R D A + R L + I
Sbjct: 280 EAVKFYK-EMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYL----REMKGLGLVPDGVI 334
Query: 145 MLSRISKF---QSYEETLEAFDRMEREIFVGIRKFGS----EEFNVLLQAFCTQKEMKEA 197
I F S E L D M VG FG +N LL C Q + +A
Sbjct: 335 YTMVIGGFCRAGSMSEALRVRDEM-----VG---FGCLPDVVTYNTLLNGLCKQHRLLDA 386
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ ++ R P+ T L+ G+ G+ + ++ + RP VVTYN IDG
Sbjct: 387 EKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDG 446
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
C+KG A L+++M LP+ T + LI + A DEM K+ P+
Sbjct: 447 MCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPN 506
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
I YN++I R ++ + + +M + + D +T++T+ G +K + G +++
Sbjct: 507 IRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFN 566
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + P T M++ F + ++ + D G P + L+ G + G
Sbjct: 567 IMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAG 626
Query: 437 RWEEAFECSKQMLVR 451
++AF+ +M+ R
Sbjct: 627 NSKQAFQLHDEMIHR 641
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/256 (24%), Positives = 113/256 (44%), Gaps = 12/256 (4%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPD F +H R F+ A +L + QR P ++T S+ + R E
Sbjct: 399 TPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANE 458
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
+ D REI +++L+ + C + ++++A +++ + PN +T N
Sbjct: 459 LWD--DMHAREILPN-----HITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G+ SG+V + F +M P ++T+N I GY K+ A +F ME+
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKE 571
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P T +I+G N+ A ++F M ++PD Y ++I+ + + A
Sbjct: 572 MVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQA 631
Query: 337 MELMDEMEEKRIGHDN 352
+L DEM + D+
Sbjct: 632 FQLHDEMIHRGFAPDD 647
>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1151
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 77/263 (29%), Positives = 127/263 (48%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC +M+E +S V+++++ PN T + G+ +G++ A E + EM+
Sbjct: 515 YNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEML 574
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V IDGYCK G A F M LP +QT + LIHG +
Sbjct: 575 DSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQ 634
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F E+ + L PD+ Y ++IS+L + DL AA EL D+M +K I + VTY+ +
Sbjct: 635 EAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALI 694
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +L+D + E + T ++ +C + + L+ + G
Sbjct: 695 NGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVP 754
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P L+ G C G E+A
Sbjct: 755 PDSFVYCALIDGCCKAGNTEKAL 777
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 138/287 (48%), Gaps = 2/287 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ + +C EM+ A F+++L S APN+ L+ G+ + G+ T + M+
Sbjct: 550 YGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCML 609
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V T+++ I G K G +AM +F E+ +P + T T+LI ++
Sbjct: 610 DQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLK 669
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L D+M K+ + P+I YNA+I+ L + ++ A EL D + EK + ++VTY T+
Sbjct: 670 AAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTII 729
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G KS+ L +L+ M P + L+ C + L+L+ +++ G
Sbjct: 730 AGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGI- 788
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
A + L+ G G+ EA++ + M+ + +Y +L Y
Sbjct: 789 ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEY 835
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC QK E +S+ ++ + P++ L+ GF + D+ EM
Sbjct: 305 YATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMF 364
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R + + TY I G CK G A LF EM + P +QT LI G V+N+
Sbjct: 365 ARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNME 424
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L E+ K NL + A+++ L C DL A EL EM + + V Y T+
Sbjct: 425 KAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIV 484
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+K E K+ M + P ++ FC +++ G + +I +G
Sbjct: 485 KGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLK 544
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P+ + + G C G + A
Sbjct: 545 PNVYTYGAFIHGYCRAGEMQAA 566
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 130/309 (42%), Gaps = 8/309 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P + T ++ R+ K + + L FD E+ + + +V++ C +
Sbjct: 230 PDVYTYTNLINAYCRVGKVEEGKHVL--FDMEEKGCIPNLVTY-----SVVIAGLCRAGD 282
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA + + ++ P+N L+ GF T + EM G +P V Y
Sbjct: 283 VDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTA 342
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+G+ K+ G A ++ EEM + T LIHG + ++ +A LF EM
Sbjct: 343 LINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMG 402
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+KPDI YN +I + +++ A EL+ E++++ + + + GL L
Sbjct: 403 IKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRAN 462
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+L+ MI P ++K R + + + G + D+G P + ++ G
Sbjct: 463 ELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGF 522
Query: 433 CSRGRWEEA 441
C G+ EE
Sbjct: 523 CKAGKMEEG 531
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/292 (21%), Positives = 125/292 (42%), Gaps = 1/292 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHE 237
+ +N L++ + + M++A + +++ N M ++ G GD+T + E
Sbjct: 408 QTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQE 467
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ G +P++V Y + G K+G F +A+++ M+ P + T+I G
Sbjct: 468 MISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGK 527
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ + + EM + LKP++ Y A I R ++ AA EM + I ++V
Sbjct: 528 MEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTD 587
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K + M++ +P +T +L+ N ++ + ++ L+D+G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P L++ LC G + AFE M + + +Y L L +
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCK 699
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 117/270 (43%)
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
V+ +L P+ T L+ + G V + +M +G P++VTY++ I G C+
Sbjct: 220 VYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCR 279
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A+ L M LP TLI G + + + + DEM LKPD A
Sbjct: 280 AGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVA 339
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y A+I+ ++ D+ A ++ +EM ++I + TY+ + GL K LE L+ M
Sbjct: 340 YTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMT 399
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P +T L++ + ++ L + + + +V GLC G
Sbjct: 400 MMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLT 459
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
A E ++M+ + + Y + + LV+
Sbjct: 460 RANELFQEMISWGLKPNIVIYTTIVKGLVK 489
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/340 (23%), Positives = 136/340 (40%), Gaps = 38/340 (11%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+VL+ +++EA VF +LL + P+ T L+ + GD+ A + +M
Sbjct: 621 SVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCK 680
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G P++VTYN I+G CK G A LF+ + + T +T+I G N+ +
Sbjct: 681 KGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTE 740
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A QLF M + PD Y A+I + + A+ L M E+ I ++ +
Sbjct: 741 AFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIA-STPAFNALID 799
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW---------- 410
G K L +L + M++ P T +L+++ C + L+
Sbjct: 800 GFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMP 859
Query: 411 ----------GY---------------LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
GY ++ RG P A ++V G W +A +
Sbjct: 860 NVLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLV 919
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMIK 484
ML V + Y +L L + N +E L+ LD + K
Sbjct: 920 DDMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEK 959
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 106/215 (49%), Gaps = 4/215 (1%)
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK 223
++F G++ G S + L+ C ++A S+F+ ++ + N L+ GF
Sbjct: 743 QLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFF 802
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ G + +MV P+ VTY I I+ +C G +A +LF EM++ +P++
Sbjct: 803 KLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVL 862
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T T+L+HG + + LFDEM R +KPD A++ M+ + ++ + A++L+D+M
Sbjct: 863 TYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDM 922
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+ + Y + L K + L V K+ D +
Sbjct: 923 LSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEV 957
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/355 (24%), Positives = 139/355 (39%), Gaps = 46/355 (12%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHP 134
+ N KA F+ L P +H L++ +A + S + + P
Sbjct: 592 YCKDGNTTKAFAKFRCMLDQG-VLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVP 650
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ T S+ +S + K + E D M ++ GI +N L+ C E+
Sbjct: 651 DVFTYTSL---ISNLCKEGDLKAAFELHDDMCKK---GINP-NIVTYNALINGLCKLGEI 703
Query: 195 KEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+AR +F + + A N+ T + ++ G+ +S ++T +H M L G P Y
Sbjct: 704 AKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCAL 763
Query: 254 IDGYCKKGCFGDAMRLFEEM--ERVACLPSLQ---------------------------- 283
IDG CK G A+ LF M E +A P+
Sbjct: 764 IDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823
Query: 284 ----TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
T T LI V NI +A QLF EM KRN+ P++ Y +++ R + L
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVML 393
DEM + I D++ + M +K KL D M+ EG V K +++
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILI 938
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 126/308 (40%), Gaps = 32/308 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
F++L C A +V +++ P+ K ++ ++ +KE ++
Sbjct: 110 FSILSLILCNSGLFGNAANVLERMIDTRNPHVKILDSIIKCYKEINGSSSSS-------- 161
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLF------EEMERVACLPSLQTITTLIHGAGL 294
SVV + I ID Y KKG +A+ +F E + +AC SL L+ G
Sbjct: 162 -----SVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSK--DLLKG--- 211
Query: 295 VRNIHQARQLFDEMPKRNLK---PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+LF ++ K L PD+ Y +I++ R + ++ +MEEK +
Sbjct: 212 -----NRVELFWKVYKGMLGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPN 266
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
VTY + GL ++ ++ +L M +P L+ FC R G ++
Sbjct: 267 LVTYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLD 326
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ G P A L+ G + AF+ ++M R+ +++ +Y L L +
Sbjct: 327 EMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIG 386
Query: 472 ANEKLEDL 479
EK EDL
Sbjct: 387 DLEKAEDL 394
>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g09060-like [Cucumis sativus]
Length = 701
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 187/432 (43%), Gaps = 27/432 (6%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L F + +KA E +K L P+ + + ++ L ++ D++ E+ + ++
Sbjct: 223 NILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMK 282
Query: 131 RTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
+ P L T SM LS+ F + E+ + + +E + +R + N +L
Sbjct: 283 KNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQ--EMIESGLSPDVRTY-----NAMLSGL 335
Query: 189 CTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++ + ++ + N + N+L+ G ++ V ++ + RG +
Sbjct: 336 FRTGKLNKCFELWNVMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADST 395
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY + I+G CK G A+R+ EE E ++++HG + QA +L +M
Sbjct: 396 TYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQM 455
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K K + +N++I+ +R L A+ ++ EM+ K V+Y+T+ GL K+
Sbjct: 456 KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERF 515
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
M+E P T +L+ C +VD+ LNLW I++ P +++
Sbjct: 516 SDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNII 575
Query: 429 VTGLCSRGRWEEAFECSKQM--------LVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
+ GLC+ + + A E QM LV + E Y+ + E L+ D
Sbjct: 576 IHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYK-------AGDCVEALKIWD 628
Query: 481 RMIKNLQAVLPP 492
R+ L+A L P
Sbjct: 629 RI---LEAGLQP 637
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 150/316 (47%), Gaps = 6/316 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
+ L+ A + +A +F ++ R P+ NIL+ GF GD V A E++ +
Sbjct: 187 YGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKRLL 246
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
PSV TYNI I+G CK G ++M ++ M++ P L T +++IHG N
Sbjct: 247 TESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNF 306
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ A ++F EM + L PD+ YNAM+S L R LN EL + M + + V+Y+ +
Sbjct: 307 NAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCCNI-VSYNML 365
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL+ + +E + + E + T +L+ C N ++ L + + G
Sbjct: 366 IQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGA 425
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
A +V GLC +G E+A E QM RR+++ + L V+A KLE+
Sbjct: 426 DLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRA---FKLEE 482
Query: 479 LDRMIKNLQAVLPPPT 494
+++ +++ PT
Sbjct: 483 AISVLREMKSKDCAPT 498
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/317 (23%), Positives = 131/317 (41%), Gaps = 39/317 (12%)
Query: 113 LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG 172
L + Y ++A ++ + L T + S M+ + K E+ +E +M++
Sbjct: 404 LCKNGYLNKALRILEEAENEGADLDTF-AYSSMVHGLCKKGMLEQAVELIHQMKKNR--- 459
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAME 232
RK S FN L+ + +++EA SV
Sbjct: 460 -RKLNSHVFNSLINGYVRAFKLEEAISVL------------------------------- 487
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
EM + P+VV+YN I+G CK F DA +EM P + T + LI G
Sbjct: 488 ---REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGL 544
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ A L+ + + LKPD+ +N +I L + ++ A+E+ +M + D
Sbjct: 545 CRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDL 604
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VT++T+ GL K+ K++DR++E P + + K C RV +
Sbjct: 605 VTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYD 664
Query: 413 LIDRGFCPHGHALDLLV 429
+DRG P+ ++LV
Sbjct: 665 ALDRGILPNAPTWNVLV 681
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 100/406 (24%), Positives = 165/406 (40%), Gaps = 47/406 (11%)
Query: 75 RLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHP 134
+L A N AL F QHP + P F HIL R+ D +L+ HV R
Sbjct: 15 KLLKAEKNPNAALAIFDSACQHPGYAHPPFVFH---HILRRL--MDP--KLVVHVGRI-- 65
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ L R + E+ I+ + A C+ +
Sbjct: 66 ---------VDLMRAQRCTCSEDV----------ALSAIKAY----------AKCSMPD- 95
Query: 195 KEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+A ++F ++ F P ++ N +L F ES E+F+ G P++ TYNI
Sbjct: 96 -QALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I CKK F L M P + + TLI+ N+ A +LFDEM R
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTMFFGLMKSSGLEGV 371
+ PD+ YN +I +R D A E+ + + + +V TY+ M GL K L+
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
++++RM + + P T ++ + ++ +I+ G P + +++G
Sbjct: 275 MEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSG 334
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
L G+ + FE M + + SY ML + L+ N+K+E
Sbjct: 335 LFRTGKLNKCFELWNVM-SKNNCCNIVSYNMLIQGLLD---NKKVE 376
>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 499
Score = 121 bits (303), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 99/360 (27%), Positives = 176/360 (48%), Gaps = 10/360 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A +FFK+ P+ A + +L R F++A E+++ V+++ L + I
Sbjct: 2 AYKFFKWVRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQ--PRIFIE 59
Query: 146 LSR-ISKFQSYEETLEAFDRMEREIFVGIR-KFGSEEFNVLLQAFCTQKEMKEARSVF-V 202
L+R + E+++EA RME G R + +N L+ AF ++A +V+ V
Sbjct: 60 LARGYASAGLLEKSVEALKRME-----GHRCALTASAYNSLIDAFVKAGYTQKALAVYRV 114
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
S P+ T N+L+ FK++ V ++ + EM + P+V+TY+I ID CK G
Sbjct: 115 MGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGG 174
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A+++F +M+ C P++ T T++I G G ++ +A LF+EM L YN+
Sbjct: 175 VEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNS 234
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L R +AA +L EM K + D+VT+ ++ +GL + +++ +
Sbjct: 235 LIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVG 294
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+L+ C + R+D ++G L + G P + + L+ GLC GR +AF
Sbjct: 295 CALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAF 354
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 156/363 (42%), Gaps = 14/363 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
KAL ++ + P F ++ + + D W+L +Q + P+++T
Sbjct: 107 KALAVYR-VMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVIT---Y 162
Query: 143 SIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
SI++ + K E+ L+ F D R I + S ++ + +A +F
Sbjct: 163 SILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTS-----MIDGLGKSGHVDKAFFLF 217
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++ S N L+ G SG A + EM+ +G +P VT+ + G
Sbjct: 218 EEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVA 277
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A R+F+E V C + LI + + +A ++F E+ + L PD+ +
Sbjct: 278 GRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTF 337
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NA++ L + ++ A L+ +M+ D Y+T+ GL KS +E +L M
Sbjct: 338 NALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQS 397
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ P T L+ C R++ L L+ + +GF + + ++ GLC GR +E
Sbjct: 398 LGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDE 456
Query: 441 AFE 443
A++
Sbjct: 457 AYK 459
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 134/309 (43%), Gaps = 4/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ AF K + +F ++ ++ +PN T +IL+ + G V + +M
Sbjct: 127 FNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMK 186
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG RP++ TY IDG K G A LFEEM + + +LIHG G
Sbjct: 187 SRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRAD 246
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF EM + L+PD + +++ L + A + E + D Y+ +
Sbjct: 247 AAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLI 306
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L KS L+ +++ + E VP T LM C + R+ L G + G
Sbjct: 307 DTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCT 366
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ GL GR EEA + +M + +Y L + ++ ++ED
Sbjct: 367 PDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTL---IDESCKGGRIEDA 423
Query: 480 DRMIKNLQA 488
R+ + + A
Sbjct: 424 LRLFEEISA 432
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 87/195 (44%), Gaps = 25/195 (12%)
Query: 110 LHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+ L + + D+AWE+ ++ P + T ++ L + + +AF
Sbjct: 306 IDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIH------DAF----- 354
Query: 168 EIFVG-IRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLG 221
I +G +++ G +N L+ ++EA + +++ S + P+ T N L+
Sbjct: 355 -ILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDE 413
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--ERVACL 279
+ G + + E+ +GF + VTYN ++G C G +A +LF M E V +
Sbjct: 414 SCKGGRIEDALRLFEEISAKGF-ANTVTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGV 472
Query: 280 --PSLQTITTLIHGA 292
P T TTL++GA
Sbjct: 473 IDPDFVTYTTLLNGA 487
>gi|7340725|emb|CAB82968.1| putative protein [Arabidopsis thaliana]
Length = 308
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 123/243 (50%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
RF PN T +LL G+ ++ +++M+ G +P +V +N+ ++G + DA
Sbjct: 2 RFTPNMMTYTVLLNGWCRVRNLIEAARIWNDMIDHGLKPDIVAHNVMLEGLLRSMKKSDA 61
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
++LF M+ P++++ T +I ++ A + FD+M L+PD Y +I+
Sbjct: 62 IKLFHVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDMVDSGLQPDAAVYTCLITG 121
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ L+ EL+ EM+EK D TY+ + + E ++Y++MI+ + P
Sbjct: 122 FGTQKKLDTVYELLKEMQEKGHPPDGKTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPS 181
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T M+MK + V ++G +W +I +G CP ++ +L+ GL S G+ EA +
Sbjct: 182 IHTFNMIMKSYFVARNYEMGRAVWDEMIKKGICPDDNSYTVLIRGLISEGKSREACRYLE 241
Query: 447 QML 449
+ML
Sbjct: 242 EML 244
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/229 (20%), Positives = 82/229 (35%), Gaps = 38/229 (16%)
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
HV ++ ++S +IM+ K S E +E FD M
Sbjct: 66 HVMKSKGPCPNVRSYTIMIRDFCKQSSMETAIEYFDDM---------------------- 103
Query: 188 FCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ S P+ L+ GF + + EM +G P
Sbjct: 104 ----------------VDSGLQPDAAVYTCLITGFGTQKKLDTVYELLKEMQEKGHPPDG 147
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TYN I + R++ +M + PS+ T ++ + RN R ++DE
Sbjct: 148 KTYNALIKLMANQKMPEHGTRIYNKMIQNEIEPSIHTFNMIMKSYFVARNYEMGRAVWDE 207
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
M K+ + PD +Y +I LI A ++EM +K + + Y+
Sbjct: 208 MIKKGICPDDNSYTVLIRGLISEGKSREACRYLEEMLDKGMKTPLIDYN 256
>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g01110-like [Vitis vinifera]
Length = 746
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 178/384 (46%), Gaps = 16/384 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + ++ R ++A+ELM + + P + T ++ L + K+
Sbjct: 287 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY------ 340
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L A ++ + +G+ + +N+LL C M +A +F ++ S+ P+ + +
Sbjct: 341 LRAKGVLDEMLKIGMSP-DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ ++G + ++ +M G P V Y I I G+C+ G +A+++ +EM
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C+ + T T+++G + + +A +LF EM +R + PD + +I+ + ++N A+
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L + M ++ + D VTY+T+ G K S +E V +L++ MI + P + +L+ +
Sbjct: 520 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 579
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C V LW ++++GF + +V G C G +A E ML++
Sbjct: 580 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 639
Query: 458 ASYRMLQRYLVQANANEKLEDLDR 481
+Y L N K E++DR
Sbjct: 640 ITYNTL------INGFIKEENMDR 657
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L C +K + EA +F ++ R P+ T L+ G+ + G++ + M+
Sbjct: 467 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMI 526
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R +P VVTYN IDG+CK L+ +M P+ + LI+G + +
Sbjct: 527 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 586
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+DEM ++ + I N ++ R + A E + M K I D +TY+T+
Sbjct: 587 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 646
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K ++ L ++M +P T +++ F R+ + +I+RG
Sbjct: 647 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 706
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P L+ G ++ +EAF +ML R
Sbjct: 707 PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 738
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 168/427 (39%), Gaps = 50/427 (11%)
Query: 50 LHPTLLQHLPQTTPLS-STLVENVLGRLFAAHSNGLKALEF-----------FK------ 91
L+P+ ++ Q+T LS S L E VL L N L+ L F +K
Sbjct: 53 LNPSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQ 112
Query: 92 --------FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
T P+F + +F +HIL R R A ++ + R
Sbjct: 113 LGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK----------- 161
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
S +S+ + E + + V F++L++ + ++++E F
Sbjct: 162 ---SGVSRVEIVESLVLTYGNCGSNPLV---------FDLLVRTYVQARKLREGCEAFRV 209
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
L S+ + N LL G + G V Y E+V G + +V T NI I+ CK
Sbjct: 210 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 269
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+ +ME P + T TLI+ + +A +L D M + LKP + YNA
Sbjct: 270 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 329
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ L + A ++DEM + + D TY+ + ++ + +++D M
Sbjct: 330 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 389
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
VP + L+ N +D L + + + G P +L+ G C G EA
Sbjct: 390 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 449
Query: 443 ECSKQML 449
+ +ML
Sbjct: 450 KVRDEML 456
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 152/338 (44%), Gaps = 9/338 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+AL++F+ +++ P + + R +A ++ + +L + + +
Sbjct: 412 QALKYFR-DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNT 469
Query: 145 MLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L+ + K + E E F M ER +F F + L+ + M +A ++F
Sbjct: 470 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT-----LINGYSKDGNMNKAVTLFEM 524
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ R P+ T N L+ GF + ++ + +++M+ R P+ ++Y I I+GYC GC
Sbjct: 525 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 584
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A RL++EM ++ T T++ G N +A + M + + PD YN
Sbjct: 585 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 644
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ I+ +++ A L+++ME + D +TY+ + G + ++ + +MIE
Sbjct: 645 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 704
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P T L+ + + ++ RGF P
Sbjct: 705 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 77 FAAHSNGLKALEFFKFTLQHP------HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
++ N KA+ F+ +Q + D F K + M ++ W M +
Sbjct: 509 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG----SEMEKVNELWNDMIS-R 563
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R +P+ + S I+++ E +D M + F + N +++ +C
Sbjct: 564 RIYPNHI---SYGILINGYCNMGCVSEAFRLWDEMVEKGF----EATIITCNTIVKGYCR 616
Query: 191 QKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+A LL P+ T N L+ GF + ++ ++M G P V+T
Sbjct: 617 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 676
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN+ ++G+ ++G +A + +M P T T+LI+G N+ +A ++ DEM
Sbjct: 677 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 736
Query: 310 KRNLKPD 316
+R PD
Sbjct: 737 QRGFVPD 743
>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 121 bits (303), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 9/380 (2%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
F+ + M D+A+E + + L T+++ + +LS K E + M
Sbjct: 154 FDYLIKSCCDMNRADEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 166 EREIFVGIR-KFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFK 223
R +R K FN+++ C + ++K+A+ + S PN T N ++ G+
Sbjct: 213 FR-----LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
SG V A + M + P TY I G CK+G +A ++FEEM + PS
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
TLI G N+ A DEM K+ + P + YN++I +L + + A ++ E+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+EK I D +TY+ + G + + + L+D M+ P +T L+ R+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-M 462
+L+ + G P + L+ G CS + AFE K M + E ++ +
Sbjct: 448 KEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 463 LQRYLVQANANEKLEDLDRM 482
+Q + + E E D M
Sbjct: 508 MQGHCREGKVEEARELFDEM 527
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 149/343 (43%), Gaps = 8/343 (2%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
Q+ P T S+ +S + K EE + F+ M ++ G+R + +N L+ FC
Sbjct: 285 QKIEPDSFTYGSL---ISGMCKQGRLEEASKIFEEMVQK---GLRP-SAVIYNTLIDGFC 337
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ + A + ++L + +P T N L+ E E+ +G P +
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYNI I+GYC+ A L +EM P+ +T T+L+H + +A LF ++
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ PD +NA+I ++ A EL+ +M+ ++ D VT++T+ G + +
Sbjct: 458 TSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
E +L+D M P + L+ + + + ++D GF P + L
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
V GLC + A E K+M+ + + +Y L + + N
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 136/312 (43%), Gaps = 2/312 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+ L+++ C EA F + + P +T N LL F + A + Y EM
Sbjct: 154 FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMF 213
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ SV T+NI I+ CK+G A ME P++ T T++HG +
Sbjct: 214 RLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVE 273
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + M ++ ++PD Y ++IS + + L A ++ +EM +K + V Y+T+
Sbjct: 274 AADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLI 333
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G L+ D M++ P T L+ + R D + + ++G
Sbjct: 334 DGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGIS 393
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P ++L+ G C ++AF +ML + ++ +Y L L + N ++ +DL
Sbjct: 394 PDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDL 453
Query: 480 DRMIKNLQAVLP 491
+ I + + VLP
Sbjct: 454 FKKITS-EGVLP 464
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 11/302 (3%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S ++ N L F N L +K + +PT + +H L + D+A +
Sbjct: 325 SAVIYNTLIDGFCNKGN-LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383
Query: 126 MSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ +Q P +T +I+++ + + ++ D M + GI+ + +
Sbjct: 384 IKEIQEKGISPDAITY---NILINGYCRCANAKKAFLLHDEM---LASGIKP-TKKTYTS 436
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL + MKEA +F K+ S P+ N L+ G + +V +M
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VT+N + G+C++G +A LF+EM+R P + TLI G +I A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
++ +EM P + YNA++ L + ++ + A EL+ EM K + D+ TY T+ G+
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 363 MK 364
K
Sbjct: 617 AK 618
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 108/246 (43%), Gaps = 4/246 (1%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF+ S+V ++ I C +A F M+ LP+++T +L+ + A
Sbjct: 147 GFKSSIV-FDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAA 205
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L+ EM + +K + +N MI+ L + L A + + ME + + VTY+T+ G
Sbjct: 206 WVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHG 265
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
S +E + M K P + T L+ C R++ ++ ++ +G P
Sbjct: 266 YCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPS 325
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ L+ G C++G + A +ML + + ++Y L L ++ ++ +
Sbjct: 326 AVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFM---EQRTDEAEC 382
Query: 482 MIKNLQ 487
MIK +Q
Sbjct: 383 MIKEIQ 388
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 89/200 (44%), Gaps = 14/200 (7%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT + LH+L++ +A +L + + P + ++ S + E
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFEL 488
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L+ DRM K +E FN ++Q C + +++EAR +F ++ R P++ +
Sbjct: 489 LKDMDRM---------KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G+ GD+ +EM+ GF P+V+TYN + G CK A L +EM
Sbjct: 540 NTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVS 599
Query: 276 VACLPSLQTITTLIHGAGLV 295
P T TLI G V
Sbjct: 600 KGMTPDDTTYFTLIEGIAKV 619
>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 546
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/361 (24%), Positives = 161/361 (44%), Gaps = 14/361 (3%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
+R P+L++ + L ++ K + +E D R + + +N L+ +C
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIE--DMKVRGVSANVI-----TYNTLIDGYC 209
Query: 190 TQKE---MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ M +A ++ ++ + PN T NIL+ GF + +V+A + EM +G +P
Sbjct: 210 KMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKP 269
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+VVTYN I+G C G +A L ++M P++ T L++G + + QA +LF
Sbjct: 270 NVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELF 329
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
D+MPK+ + P++ YN +I + + ++ A L M K + D TY+ + GL +
Sbjct: 330 DDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRK 389
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
LE L M T +L+ C + L L + +G P
Sbjct: 390 GDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTY 449
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+ ++ G C G A QM R + A+Y +L + + +KLED + ++
Sbjct: 450 NTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKK---DKLEDANGLLNE 506
Query: 486 L 486
+
Sbjct: 507 M 507
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 124/270 (45%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ FC K + A VF ++ + PN T N L+ G +G V +MV
Sbjct: 239 FNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMV 298
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P+++T+N ++G+CK A LF++M + P++ T LI N+
Sbjct: 299 NSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENME 358
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L+ M + + PD+ YN +I+ L R DL AA L+ EM+ K + D +TY+ +
Sbjct: 359 DAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILI 418
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L ++ +L D M P T ++ +C + LNL + G
Sbjct: 419 DSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRL 478
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ ++L+ G C + + E+A +ML
Sbjct: 479 ANVATYNVLIKGFCKKDKLEDANGLLNEML 508
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 142/299 (47%), Gaps = 9/299 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ +I++ K ++ ++ F M R+ G+ K +N L+ C ++ EA ++
Sbjct: 238 TFNILIDGFCKDKNVSAAMKVFAEMNRQ---GV-KPNVVTYNSLINGLCNNGKVNEATAL 293
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++ S PN T N LL GF ++ V + +M +G P+V TYNI ID YCK
Sbjct: 294 RDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCK 353
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR--NIHQARQLFDEMPKRNLKPDI 317
DA L+ M P + T LI AGL R ++ AR L EM ++LK D+
Sbjct: 354 DENMEDAFALYRIMLGKGVCPDVSTYNCLI--AGLCRKGDLEAARNLVSEMDTKHLKADL 411
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN +I SL ++ A+ L+DEM K + +TY+TM G K L L +
Sbjct: 412 ITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQ 471
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + + T +L+K FC +++ L ++++G P+ +++ + +G
Sbjct: 472 MEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKG 530
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 127/288 (44%), Gaps = 38/288 (13%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI------------------- 254
+ N L+ G + G++ ME Y EM+ R P+++++NI I
Sbjct: 130 SCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDM 189
Query: 255 ----------------DGYCKKGCFG---DAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
DGYCK G G A + +EM P+ T LI G
Sbjct: 190 KVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKD 249
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+N+ A ++F EM ++ +KP++ YN++I+ L +N A L D+M + + +T+
Sbjct: 250 KNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITH 309
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + G K+ ++ +L+D M + P T +L+ +C + ++ L+ ++
Sbjct: 310 NALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLG 369
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+G CP + L+ GLC +G E A +M + + +Y +L
Sbjct: 370 KGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNIL 417
>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 577
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 142/300 (47%), Gaps = 5/300 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + K++ ++ L F ME + G+R ++ L+ C + +A +
Sbjct: 264 STVIDSLCKYRHEDDALNLFTEMENK---GVRP-NVITYSSLISCLCNYERWSDASRLLS 319
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ R PN T N L+ F + G + E Y EM+ R P + TY+ I+G+C
Sbjct: 320 DMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 379
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A +FE M C P++ T TLI+G + I + +LF EM +R L + Y
Sbjct: 380 RLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYT 439
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + RD + A + +M + + +TY+T+ GL K+ LE +++ +
Sbjct: 440 TLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRS 499
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K P T ++++ C +V+ G +L+ L +G P + +++G C +G EEA
Sbjct: 500 KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEA 559
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 95/377 (25%), Positives = 168/377 (44%), Gaps = 16/377 (4%)
Query: 101 PTPDAFE--KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P P FE K L +A+M+ FD L +QR S L + +I+++ +
Sbjct: 81 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLA 139
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
L +M K G E + LL +C K + +A ++ +++ + P+
Sbjct: 140 LALLGKM--------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 191
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ G + MV RG +P++VTY + ++G CK+G A L +M
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E ++ +T+I R+ A LF EM + ++P++ Y+++IS L
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A L+ +M E++I + VT++ + +K L KLYD MI+ P T L
Sbjct: 312 SDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSL 371
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FC++ R+D +++ +I + P+ + L+ G C R +E E ++M R
Sbjct: 372 INGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 454 QVSEASYRMLQRYLVQA 470
+ +Y L QA
Sbjct: 432 VGNTVTYTTLIHGFFQA 448
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/322 (22%), Positives = 136/322 (42%), Gaps = 45/322 (13%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ + L + R+ D A L + ++ P+++T S+ L ++ L D
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLS--D 320
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ER+I + F N L+ AF + ++ EA ++ +++ R P+ T + L+ GF
Sbjct: 321 MIERKINPNVVTF-----NALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 375
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ + + M+ + P+VVTYN I+G+CK + + LF EM + + +
Sbjct: 376 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNT 435
Query: 283 QTITTLIHG---------------------------------AGLVRN--IHQARQLFDE 307
T TTLIHG GL +N + +A +F+
Sbjct: 436 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 495
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
+ + ++P I YN MI + + + +L + K + D + Y+TM G +
Sbjct: 496 LQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGL 555
Query: 368 LEGVCKLYDRMIEGKFVPKTRT 389
E L+ +M E +P + T
Sbjct: 556 KEEADALFRKMREDGPLPDSGT 577
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 84/196 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF M + LPS+ L+ ++ L ++M + + ++ YN +I
Sbjct: 68 DAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILI 127
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R ++ A+ L+ +M + VT ++ G + L D+M+E +
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ RG P+ ++V GLC RG + AF
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNL 247
Query: 445 SKQMLVRRRQVSEASY 460
+M + + + Y
Sbjct: 248 LNKMEAAKIEANVVIY 263
>gi|297839881|ref|XP_002887822.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333663|gb|EFH64081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 407
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/373 (25%), Positives = 171/373 (45%), Gaps = 16/373 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KALEFF + + F T + F + + IL + F+ W L++ + SL + I
Sbjct: 23 KALEFFNWVEKESGFRHTTETFNRMIDILGKYFEFETCWALINRMIGNPESLPNHVTFRI 82
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA------R 198
+ R +E ++A+D+++ +R S F L+ A C K + EA +
Sbjct: 83 VFKRYVTAHLVQEAIDAYDKLDD---FNLRDDTS--FYNLVDALCEHKHVVEAEELCFGK 137
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+V S N K N++L G+ + G + ++ +M G + +Y+I +D C
Sbjct: 138 NVIAHGFS--VSNTKIHNLILRGWSKLGWWGKCKEYWDKMDTEGVPKDLFSYSIYMDIMC 195
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A++L++EM+ + T+I G + + ++F EM +R +P++
Sbjct: 196 KSGKPWKAVKLYKEMKSRRIKLDVVAYNTVIRAIGASQGVEFGIRVFREMRERGCEPNVA 255
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I L + A ++DEM +K D+++Y +F L K S + L+ RM
Sbjct: 256 THNTIIKLLCEDGRMRDAYRMLDEMPKKGCQPDSISYMCLFSRLEKPS---EILSLFGRM 312
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
I PK T VMLM+ F + L +W + + G P A + ++ L +G
Sbjct: 313 IRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTPDSAAYNAVIDALIQKGML 372
Query: 439 EEAFECSKQMLVR 451
+ A E ++M+ R
Sbjct: 373 DMAREYEEEMIER 385
>gi|410109889|gb|AFV61024.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
camara]
Length = 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + EM+++G P+ VT+ IDG+CK
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 93/406 (22%), Positives = 177/406 (43%), Gaps = 38/406 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH ++ M H TH L KS+ +++SR K + +
Sbjct: 9 SPANSTFRHTLH----------SYCTMIHFLCTHQLLSEAKSLIEVVVSRKGKGSASAVF 58
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V F+ L+ A+ +++A + L+R + P
Sbjct: 59 AAVLETKGNQRSDIYV---------FSGLITAYLESGFLRDAIECY--RLTREHKLWVPF 107
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK G A +
Sbjct: 108 DTCRKVLEHLMKLKYFKLVWG---FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+ + + PS+ + TL++G + ++ + +L M ++PD+ Y+ +I+ L +
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A L DEM K + + VT+ T+ G K+ ++ ++Y +M+ +P T
Sbjct: 225 ESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 284
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C + +L + +G P L+ G C G + AFE K+M+
Sbjct: 285 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
++ + +Y L L Q + D ++M++ + +V L P T
Sbjct: 345 QENIRLDDVAYTALISGLCQEG---RSVDAEKMLREMLSVGLKPDT 387
>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
Length = 850
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 177/384 (46%), Gaps = 16/384 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + ++ R ++A+ELM + + P + T ++ L + K+
Sbjct: 391 PDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY------ 444
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L A ++ + +G+ + +N+LL C M +A +F ++ S+ P+ + +
Sbjct: 445 LRAKGVLDEMLKIGMSP-DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ ++G + ++ +M G P V Y I I G+C+ G +A+++ +EM
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C + T T+++G + + +A +LF EM +R + PD + +I+ + ++N A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L + M ++ + D VTY+T+ G K S +E V +L++ MI + P + +L+ +
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C V LW ++++GF + +V G C G +A E ML++
Sbjct: 684 CNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDG 743
Query: 458 ASYRMLQRYLVQANANEKLEDLDR 481
+Y L N K E++DR
Sbjct: 744 ITYNTL------INGFIKEENMDR 761
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 124/272 (45%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L C +K + EA +F ++ R P+ T L+ G+ + G++ + M+
Sbjct: 571 YNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMI 630
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R +P VVTYN IDG+CK L+ +M P+ + LI+G + +
Sbjct: 631 QRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVS 690
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+DEM ++ + I N ++ R + A E + M K I D +TY+T+
Sbjct: 691 EAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLI 750
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K ++ L ++M +P T +++ F R+ + +I+RG
Sbjct: 751 NGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVN 810
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P L+ G ++ +EAF +ML R
Sbjct: 811 PDRSTYTSLINGHVTQNNLKEAFRVHDEMLQR 842
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 173/441 (39%), Gaps = 50/441 (11%)
Query: 50 LHPTLLQHLPQTTPLS-STLVENVLGRLFAAHSNGLKALEF-----------FK------ 91
L+P+ ++ Q+T LS S L E VL L N L+ L F +K
Sbjct: 157 LNPSSVEDPNQSTSLSDSFLTEKVLLNLKQGKLNSLRNLLFRLDSVVVVDVLYKCRENLQ 216
Query: 92 --------FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
T P+F + +F +HIL R R A ++ + R
Sbjct: 217 LGQRFIDSITSNCPNFKHSLQSFSAMIHILVRSRRLPDAQAVILRMVRK----------- 265
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
S +S+ + E + + V F++L++ + ++++E F
Sbjct: 266 ---SGVSRVEIVESLVLTYGNCGSNPLV---------FDLLVRTYVQARKLREGCEAFRV 313
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
L S+ + N LL G + G V Y E+V G + +V T NI I+ CK
Sbjct: 314 LKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQK 373
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+ +ME P + T TLI+ + +A +L D M + LKP + YNA
Sbjct: 374 IENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNA 433
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ L + A ++DEM + + D TY+ + ++ + +++D M
Sbjct: 434 IINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQG 493
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
VP + L+ N +D L + + + G P +L+ G C G EA
Sbjct: 494 VVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEAL 553
Query: 443 ECSKQMLVRRRQVSEASYRML 463
+ +ML + + +Y +
Sbjct: 554 KVRDEMLEQGCXLDVVTYNTI 574
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 132/286 (46%), Gaps = 7/286 (2%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
L + + + +L+ + K + E E F M ER +F F + L+ + M
Sbjct: 566 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT-----LINGYXKDGNMN 620
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+A ++F ++ R P+ T N L+ GF + ++ + +++M+ R P+ ++Y I I
Sbjct: 621 KAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILI 680
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+GYC GC +A RL++EM ++ T T++ G N +A + M + +
Sbjct: 681 NGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIV 740
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD YN +I+ I+ +++ A L+++ME + D +TY+ + G + ++ +
Sbjct: 741 PDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELI 800
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+MIE P T L+ + + ++ RGF P
Sbjct: 801 MLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 102/247 (41%), Gaps = 19/247 (7%)
Query: 77 FAAHSNGLKALEFFKFTLQHP------HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
+ N KA+ F+ +Q + D F K + M ++ W M +
Sbjct: 613 YXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG----SEMEKVNELWNDMIS-R 667
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R +P+ + S I+++ E +D M + F + N +++ +C
Sbjct: 668 RIYPNHI---SYGILINGYCNMGCVSEAFRLWDEMVEKGF----EATIITCNTIVKGYCR 720
Query: 191 QKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+A LL P+ T N L+ GF + ++ ++M G P V+T
Sbjct: 721 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 780
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN+ ++G+ ++G +A + +M P T T+LI+G N+ +A ++ DEM
Sbjct: 781 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 840
Query: 310 KRNLKPD 316
+R PD
Sbjct: 841 QRGFVPD 847
>gi|410109923|gb|AFV61041.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hederifolia]
Length = 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLIPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQCLLPDLITYNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKF 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 319 TYXTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDDRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 178/407 (43%), Gaps = 38/407 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH ++ M H TH LL KS+ +++SR K + +
Sbjct: 9 SPANSTFRHTLH----------SYCTMIHFLCTHQMLLEAKSLIQVVVSRKGKGSASAVF 58
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V + L+ A+ +++A + L+R + P
Sbjct: 59 ATILETKGTQRSDIYV---------LSGLITAYLESGFLRDAIECY--RLTREHKLWVPF 107
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK G A +
Sbjct: 108 DTCRKVLEHLMKLKYFKLVWG---FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+ + + PS+ + TL++G + ++++ +L M ++PD+ Y+ +I+ L +
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A EL DEM K + + VT+ T+ G K+ ++ ++Y +M+ +P T
Sbjct: 225 ESKMDDANELFDEMLVKGLIPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQCLLPDLIT 284
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ + +L + +G P L+ G C G + AFE K+M+
Sbjct: 285 YNTLIYGLXKKGDLKQAHDLIDEMSMKGLKPDKFTYXTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPTR 495
++ + +Y L L Q + D ++M++ + +V L P R
Sbjct: 345 QENIRLDDVAYTALISGLCQEGRS---VDAEKMLREMLSVGLKPDDR 388
>gi|410109901|gb|AFV61030.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
microcephala]
Length = 431
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKFWVPI-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ I D V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 129/309 (41%), Gaps = 4/309 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 37 EAKSLIQVVVSRKGKGSASAVFAAILETRGTQRSDIYVFSGLITAYLESGFLRDAIECYR 96
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
F + T ++ K F +EE+ SL L+H
Sbjct: 97 LTREHKFWVPIDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPASLYFFNILMHRFCKDG 156
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+I A+ +FD + K L+P + +YN +++ IR DL+ L M + D TY
Sbjct: 157 DIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYS 216
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M+ VP T L+ C N RVDL + ++ ++ +
Sbjct: 217 VLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 276
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P + L+ GLC +G ++A +M V+ + + +Y ++ + + +
Sbjct: 277 SLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSA 336
Query: 476 LEDLDRMIK 484
E RMI+
Sbjct: 337 FEHRKRMIQ 345
>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 788
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 161/345 (46%), Gaps = 18/345 (5%)
Query: 154 SYEETLEAFDRME-----REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL 204
+Y +E + E RE+F + K G E +NVL+ +C K + EA +F +L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++ P + N L+ G SG ++ ++ EM P VVTYNI ID CK+G
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ + M + P++ T ++ G L N++ A+ +F+ M K L+PDI YN +
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ + ++ A+ L EM K + D +Y+++ GL + V +L D M +
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +L+ FC D ++L+ +++ G P + +V LC + + A +
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANAN-------EKLEDLDR 481
K +L+ + +Y +L L + + K+ED DR
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/304 (26%), Positives = 140/304 (46%), Gaps = 1/304 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ A C + + EA+ V + R P+ T N L+ G+ +V ++ MV
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P V+ YN+ IDGYCK +AM LF+E+ +P++ + +LI G I
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++L DEM PD+ YN +I +L + + A+ ++ M +K + + VTY+ M
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + + +++RM++ P +L+ +C VD + L+ + +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + + L+ GLC+ GR E +M + +Y +L + +K L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567
Query: 480 DRMI 483
R I
Sbjct: 568 FRQI 571
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C+ +E + K++ P++ T NIL+ + G + + M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P +VTYN ++GYC + +A LF M + P + LI G + +
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF E+ +NL P I +YN++I L ++ +L+DEM D VTY+ +
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + + M++ P T +M +C+ V++ +++ ++ G
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++L+ G C +EA K+M + ASY L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 99 FTPTPDA-FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSY 155
F P P + F+K L + RM ++ A L + +Q PS+ T + I+ +
Sbjct: 50 FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL------INCYFHQ 103
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
T AF + I K G + FN ++ FC + +A LL++ +
Sbjct: 104 SHTAFAF-----SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G ++G + A EM +P++V Y+ IDG CK G DA+ L
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
++ L T +LI G V + QL +M + N+ PD +N +I +L +
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+ A ++ M ++ D VTY+ + G + +L++RM++ P
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+L+ +C VD + L+ L ++ P + + L+ GLC+ GR
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 7/304 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + +A + ++ R + T N L+ G G + +MV
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P T+NI ID CK+G +A + M + P + T L+ G N+H
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LF+ M KR L+PD+ YN +I + + ++ AM L E+ K + +Y+++
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL S + V KL D M P T +L+ C R+ L + ++ +G
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + ++ G C R A + + R V + Y V N K E +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKD------IFNRMVKSGLEPDILNYNVLINGYCKTEMV 491
Query: 480 DRMI 483
D I
Sbjct: 492 DEAI 495
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFG---SEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+F++ ++ + F+RM +R F + F+ LL A A S+F +L S+
Sbjct: 32 RFRNVDDAVTCFNRM-------VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84
Query: 208 -FAPNNKTMNILL-LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+P+ T IL+ F +S A + ++ G++P++VT+N I+G+C G
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLL-ATILKSGYQPNLVTFNTIINGFCINGMIFK 143
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ + + L T TLI+G I A L EM K +++P++ Y+A+I
Sbjct: 144 ALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203
Query: 326 SLIRCRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
L C+D ++ A+ L ++ E+ I D VTY+++ G + V +L +M+
Sbjct: 204 GL--CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENV 261
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +L+ C R+ + + RG P + L+ G CSR EA E
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321
Query: 444 CSKQMLVRRRQVSEASYRML 463
+M+ R + +Y +L
Sbjct: 322 LFNRMVKRGLEPDVLNYNVL 341
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 6/226 (2%)
Query: 164 RMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+ ++IF + K G E +NVL+ +C + + EA +F ++ + P+ + N L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G G + ++ EM G P V+TYNI +D +CK F A+ LF ++
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GI 575
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T ++ + A + P++ Y +I++L + AM
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L+ +ME+ D +T+ + L++ + + KL + MI V
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLV 681
>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
Length = 506
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 140/272 (51%), Gaps = 13/272 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L++ F ++K+A +F K +L P+ T NIL+ GF + G + + M+
Sbjct: 246 YSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMM 305
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++ +P+V T+N +DG+CK + +F M + P++ T +L+ G LV+ ++
Sbjct: 306 IQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVN 365
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+++F+ M +R + ++ +YN MI+ + + ++ AM+L EM K I D VTY+++
Sbjct: 366 KAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLI 425
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L + M + P T ++ L L D+G
Sbjct: 426 DGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILN------------ALLTKLKDQGIQ 473
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ H +L+ GLC G+ E A + + +LV+
Sbjct: 474 PNMHTDTILIKGLCQSGKLEAARKVFEDLLVK 505
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/365 (23%), Positives = 151/365 (41%), Gaps = 41/365 (11%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A L + + +P+L + I L + K + Y L +ME E GI
Sbjct: 50 DGAVSLFNSLLHQNPTLTAFEFNKI-LGSLVKSKHYHTVLSLSQQMEFE---GINP-NFV 104
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L+ FC + A SV K+L + P+ T+N + GF G + F+ ++
Sbjct: 105 TFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKL 164
Query: 239 VLRGFRPSVVTYNIRIDGYCKKG-----------------------------------CF 263
V GF V+Y I+G CK G
Sbjct: 165 VALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHV 224
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA L+ EM P + T + LI G +V + A LF++M N+KPD+ +N +
Sbjct: 225 NDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNIL 284
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + L A ++D M + I + T++T+ G K ++ ++ M++
Sbjct: 285 VDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGI 344
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T LM +C+ +V+ ++ + RG + H+ ++++ G C + ++A +
Sbjct: 345 KPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMK 404
Query: 444 CSKQM 448
+M
Sbjct: 405 LFIEM 409
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 109/228 (47%)
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M G P+ VT+NI I+ +C+ G A + ++ ++ P + T+ T I G L
Sbjct: 92 QQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLK 151
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
IHQA D++ D +Y +I+ L + + AA++L+ ++ K + + V Y
Sbjct: 152 GQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMY 211
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G+ K + LY M+ + P T L++ F + ++ ++L+ +I
Sbjct: 212 NTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMIL 271
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + ++LV G C GR ++A M+++ + + +++ L
Sbjct: 272 ENIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTL 319
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/290 (21%), Positives = 123/290 (42%), Gaps = 1/290 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEM 238
+ L+ C E + A + ++ + N M N ++ G + V Y EM
Sbjct: 175 SYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLYSEM 234
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V + P VVTY+ I G+ G DA+ LF +M P + T L+ G +
Sbjct: 235 VAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKEGRL 294
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A+ + D M +++KP++ +N ++ + R + + M ++ I + VTY ++
Sbjct: 295 KKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTYCSL 354
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + K+++ M + + +++ FC +VD + L+ + +
Sbjct: 355 MDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHHKHI 414
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
P + L+ GLC G+ AF+ +M R + + +Y + L+
Sbjct: 415 IPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSILNALL 464
>gi|410109895|gb|AFV61027.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
urticoides]
Length = 412
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 72 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 128
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 129 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + EM+++G P+ VT+ IDG+CK
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGVTFTTLIDGHCK 240
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 241 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 300
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 301 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 360
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 361 SVGLKPDTGTYTMIVNEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 412
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A L DEM K + + V
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDGANGLFDEMLVKGLVPNGV 229
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 289
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 290 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 347
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 348 -RSVDAEKMLREMLSVGLKPDT 368
>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
Length = 818
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 125/289 (43%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N ++ +C +++AR + + F P+ T N L+ G + + +M+
Sbjct: 222 YNTMVNGYCRAGRIEDARRLINGM--PFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG PSVVTY+I +D CK+ + AM L +EM C P + T LI+ ++ +
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +P KPD Y ++ SL EL+ EM D VT++T+
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + ++ ++ D M E V T ++ C RVD + L L G P
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
A ++ GLCS +WE A E +ML E ++ + L Q
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQ 508
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/354 (22%), Positives = 147/354 (41%), Gaps = 16/354 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
K +E + + P F + L + D+A E++ H+ H + + + S
Sbjct: 373 KEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSE-HGCVADIVTYSS 431
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
+L + ++ +E R+ + +G + + +L+ C+ ++ + A +
Sbjct: 432 ILDGLCDVGRVDDAVELLSRL--------KSYGCKPDTIAYTTVLKGLCSTEQWERAEEL 483
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++L S P+ T N ++ + G V +M G P +VTYN IDG C
Sbjct: 484 MAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCN 543
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+ C DAM L +++ C P + T TL+ G V A QL M + N PD
Sbjct: 544 ESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELT 603
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+N +I+SL + L A+E + M E ++ TY + L+K+ + +L M
Sbjct: 604 FNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMT 663
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
G P T ++ +++ L+L ++ G CP L G+C
Sbjct: 664 NG--TPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLAYGVC 715
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 93/394 (23%), Positives = 157/394 (39%), Gaps = 23/394 (5%)
Query: 103 PDAFE-----KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
PD F + L + R+ ++ M H + PS++T SI+L K Y +
Sbjct: 249 PDTFTFNPLIRALCVRGRIPDALAVFDDMLH-RGCSPSVVT---YSILLDATCKESGYRQ 304
Query: 158 TLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNN 212
+ D M R G E +NVL+ A C + ++ EA ++ L S P+
Sbjct: 305 AMALLDEM--------RAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDA 356
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T +L S +E EM P VT+N + C++G A+ + +
Sbjct: 357 VTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDH 416
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M C+ + T ++++ G V + A +L + KPD AY ++ L
Sbjct: 417 MSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQ 476
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
A ELM EM D VT++T+ L + ++ ++ ++M E P T
Sbjct: 477 WERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNC 536
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++ C +D + L L G P + L+ GLC RWE+A + M+
Sbjct: 537 IIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSN 596
Query: 453 RQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKN 485
E ++ + L Q + +E L M +N
Sbjct: 597 CPPDELTFNTVITSLCQKGLLTQAIETLKIMAEN 630
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 102/459 (22%), Positives = 183/459 (39%), Gaps = 32/459 (6%)
Query: 29 QSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALE 88
++ IE R+IN PFP T N L R AL
Sbjct: 231 RAGRIEDARRLINGMPFP------------------PDTFTFNPLIRALCVRGRIPDALA 272
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIML 146
F L H +P+ + L + + QA L+ + + P ++T ++++
Sbjct: 273 VFDDML-HRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVT---YNVLI 328
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ + +E L + K + + +L++ C + KE + ++ S
Sbjct: 329 NAMCNEGDVDEALNILSNLPSHGC----KPDAVTYTPVLKSLCGSERWKEVEELLAEMTS 384
Query: 207 -RFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
AP+ T N ++ + G V A+E+ H M G +VTY+ +DG C G
Sbjct: 385 NNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDH-MSEHGCVADIVTYSSILDGLCDVGRVD 443
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ L ++ C P TT++ G +A +L EM + PD +N ++
Sbjct: 444 DAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVV 503
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+SL + ++ A+ ++++M E D VTY+ + GL S ++ +L +
Sbjct: 504 ASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCK 563
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+K C R + L ++ P + ++T LC +G +A E
Sbjct: 564 PDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIET 623
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRM 482
K M + ++Y ++ L++A A LE L M
Sbjct: 624 LKIMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGM 662
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 110/262 (41%), Gaps = 3/262 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C + + +A + L S P+ T N LL G E M+
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P +T+N I C+KG A+ + M C+P+ T + ++
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQ 653
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M N PD+ YN +IS+L + + A++L+ M + D TY ++
Sbjct: 654 AALELLSGM--TNGTPDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G+ + G + ++ R+ + P T ++ FC + R DL ++ + +++ G
Sbjct: 712 YGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCM 771
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P +L+ L G +EA
Sbjct: 772 PDESTYVILLEALAYGGLLDEA 793
>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
Length = 573
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 97/362 (26%), Positives = 164/362 (45%), Gaps = 28/362 (7%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ------ 191
T+ + +I++ K ++ L F++M RE FV + +NV++ C
Sbjct: 6 TVVTWTIIIDGFCKANQLKQALACFEKM-RE-FVAPNE---RTYNVVVNGLCKARLTSKA 60
Query: 192 ----KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPS 246
KEM++ +SV AP+ T + ++ GF + G++ EMV R G P
Sbjct: 61 YEVLKEMRDGKSV--------APDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPD 112
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VVTY +DG C+ G A + EM+ P T + LI G R + +A +L+
Sbjct: 113 VVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYK 172
Query: 307 E-MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
E + + KPD+ Y A+I + +L AM+++ ME ++ + VTY ++ GL K+
Sbjct: 173 EILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKA 232
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L+ L+ RM VP T L+ C +VD L + P +
Sbjct: 233 GDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSY 292
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+ L+ G C GR EEA + K+M + +Y L R A+ +LE+ +++N
Sbjct: 293 NALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS---RLEEARFLLEN 349
Query: 486 LQ 487
++
Sbjct: 350 MK 351
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 162/417 (38%), Gaps = 55/417 (13%)
Query: 75 RLFAAHSNGL-------KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
R + NGL KA E K P + ++ + D+A E++
Sbjct: 42 RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 101
Query: 128 HV---QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
+ P ++T S+ L R K E M RE+ + + F+ L
Sbjct: 102 EMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACE-------MVREMKLKGVEPDKFTFSAL 154
Query: 185 LQAFCTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
+ +C +++ EA ++ ++L S + P+ T L+ GF +SG++ M R
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P+VVTY+ + G CK G A+ LF M C+P++ T TTLIHG + AR
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L DEM PD +YNA++ R + A +L EM K D +TY + G
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334
Query: 363 MKSSGLEG-----------------------VCKLYDR-------------MIEGKFVPK 386
+S LE V Y R MI P
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T L+ C RVD + + ++++ P + ++ LC G +EA++
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWK 451
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/428 (22%), Positives = 174/428 (40%), Gaps = 47/428 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
P + ++ L + R +A+E++ ++ L + S +++ K +
Sbjct: 38 APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 97
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNIL 218
E M + + ++ C +M A + ++ L P+ T + L
Sbjct: 98 EILREMVTRDGIAPDVV---TYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSAL 154
Query: 219 LLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+ G+ + V A++++ + ++P VVTY IDG+CK G AM++ ME
Sbjct: 155 ITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRK 214
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C+P++ T ++L+HG ++ QA LF M + P++ Y +I L ++AA
Sbjct: 215 CVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAAR 274
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
LMDEM D V+Y+ + G + +E +L+ M +P T L++ F
Sbjct: 275 LLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGF 334
Query: 398 C------------VNFRVDLGLN---------LWGY---------------LIDRGFCPH 421
C N + G++ + GY +I R P+
Sbjct: 335 CNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPN 394
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
L+ GLC GR + A E K M+ +R + S ++ + L +L D+D
Sbjct: 395 AVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALC------RLGDMDE 448
Query: 482 MIKNLQAV 489
K L A+
Sbjct: 449 AWKLLVAM 456
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/377 (22%), Positives = 157/377 (41%), Gaps = 21/377 (5%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHP 134
F N KA++ ++ P + LH L + DQA +L + + P
Sbjct: 194 FCKSGNLEKAMKMLGV-MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 252
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+++T ++ L K ++A + E+ + +N LL +C +
Sbjct: 253 NVVTYTTLIHGLCAAHK-------VDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRI 305
Query: 195 KEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEM-VLRGFRPSVVTYNI 252
+EA+ +F ++ ++ P+ T L+ GF + + M G P VVTY+I
Sbjct: 306 EEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 365
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+ GY + F +A +EM P+ T ++LI G + A ++ M +
Sbjct: 366 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKR 425
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++P +G +N++I +L R D++ A +L+ M + VTY T+ G ++ +E
Sbjct: 426 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 485
Query: 373 KLYDRM--------IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+L++ M VP+ + L++ C +D + + L R P
Sbjct: 486 ELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 544
Query: 425 LDLLVTGLCSRGRWEEA 441
+V GL GR EEA
Sbjct: 545 CLAIVDGLLRAGRTEEA 561
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 115/242 (47%), Gaps = 6/242 (2%)
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+P+VVT+ I IDG+CK A+ FE+M E VA P+ +T +++G R +A
Sbjct: 4 QPTVVTWTIIIDGFCKANQLKQALACFEKMREFVA--PNERTYNVVVNGLCKARLTSKAY 61
Query: 303 QLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHTMFF 360
++ EM +++ PD+ Y+ +I+ + +++ A E++ EM + I D VTY ++
Sbjct: 62 EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG-YLIDRGFC 419
GL + ++ C++ M P T L+ +C +VD L L+ L +
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P L+ G C G E+A + M R+ + +Y L L +A ++ DL
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241
Query: 480 DR 481
R
Sbjct: 242 FR 243
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 102/277 (36%), Gaps = 31/277 (11%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
L + + + L + L R F S LE +F L++ D T I+
Sbjct: 311 LFKEMATKSCLPDRITYTCLVRGFCNASR----LEEARFLLENMKTAAGIDPDVVTYSIV 366
Query: 114 ----ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+R + F +A E + + + P+ +T S+ L + + E L+
Sbjct: 367 VAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRV 426
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESG 226
E VG FN ++ A C +M EA + V + + P T LL GF +G
Sbjct: 427 EPSVGT-------FNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTG 479
Query: 227 DVTAMEMFYHEM-VLRGFRPSVV---------TYNIRIDGYCKKGCFGDAMRLFEEMERV 276
ME+ Y V+R ++ I G CK AM + EE+
Sbjct: 480 R---MEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSR 536
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C P+ + ++ G +A +L + + K L
Sbjct: 537 ECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573
>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
gi|194702156|gb|ACF85162.1| unknown [Zea mays]
gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
Length = 567
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 81/326 (24%), Positives = 153/326 (46%), Gaps = 9/326 (2%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ +I+L K Y++ ++ D M ++ I + NV+L C + +++A
Sbjct: 203 TYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTY-----NVVLNGICQEGRVEDAME 257
Query: 200 VFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
F+K L + PN + NI+L G + E EM +G P+VVT+N+ I
Sbjct: 258 -FLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFL 316
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C++G AM + E+M + C P+ + L+H + IH+A + + M R PDI
Sbjct: 317 CRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDI 376
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
+YN ++++L R +++ A+EL+ ++++K ++Y+T+ GL K+ + +L D
Sbjct: 377 VSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDE 436
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M P T + C R++ + + + D G P + ++ GLC R
Sbjct: 437 MTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRE 496
Query: 438 WEEAFECSKQMLVRRRQVSEASYRML 463
A + M+ +E++Y +L
Sbjct: 497 THNAIDLFAYMISSGCMPNESTYTIL 522
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 4/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N ++ +C ++ AR + + P+ T N L+ G G + +M
Sbjct: 137 YNAMVAGYCGAGQLDAARRLVADM--PVEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFR 194
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P VVTY I ++ CK+ + AM+L +EM C P + T +++G +
Sbjct: 195 RGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVVLNGICQEGRVED 254
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +P +P+ +YN ++ L A +LM+EM K + VT++ +
Sbjct: 255 AMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLIS 314
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + +E ++ ++M + P + + L+ FC ++ + ++ RG P
Sbjct: 315 FLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYP 374
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDL 479
+ + L+T LC G + A E Q+ + SY + L +A E LE L
Sbjct: 375 DIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELL 434
Query: 480 DRMI-KNLQ 487
D M K LQ
Sbjct: 435 DEMTSKGLQ 443
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/316 (24%), Positives = 143/316 (45%), Gaps = 6/316 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N L++ C + A +V + R P+ T ILL K SG AM++ EM
Sbjct: 169 YNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLL-DEM 227
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P +VTYN+ ++G C++G DAM + + C P+ + ++ G
Sbjct: 228 HDKGCAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERW 287
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L +EM + P++ +N +IS L R + AME++++M + ++++Y+ +
Sbjct: 288 EDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPL 347
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
K + + + M+ P + L+ C N VD+ + L L D+G
Sbjct: 348 LHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGC 407
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P + + ++ GL G+ +EA E +M + Q +Y + L + +++E+
Sbjct: 408 SPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCR---EDRIEE 464
Query: 479 LDRMIKNLQAVLPPPT 494
R +Q + PT
Sbjct: 465 AVRTFCKVQDMGIRPT 480
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 4/246 (1%)
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
VL P V+ YN + GYC G A RL +M P T TLI G
Sbjct: 126 VLAASGPDVMVYNAMVAGYCGAGQLDAARRLVADM---PVEPDAYTYNTLIRGLCGRGRT 182
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A + ++M +R PD+ Y ++ + + AM+L+DEM +K D VTY+ +
Sbjct: 183 SNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGCAPDIVTYNVV 242
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G+ + +E + + P T + +++K R + L + +G
Sbjct: 243 LNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGC 302
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
P+ ++L++ LC RG E A E +QM + SY +L + Q ++ +E
Sbjct: 303 PPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAME 362
Query: 478 DLDRMI 483
++ M+
Sbjct: 363 FVELMV 368
>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g62680, mitochondrial; Flags: Precursor
gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 548
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+ A +L S + ++ P ++ + +LS I K + Y+ + +ME +GIR
Sbjct: 66 LNDAIDLFSDMVKSRP-FPSIVDFNRLLSAIVKLKKYDVVISLGKKME---VLGIRN-DL 120
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
FN+++ FC ++ A S+ K+L + P+ T+ L+ GF V+ +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G++P +V YN ID CK DA F+E+ER P++ T T L++G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A +L +M K+ + P++ Y+A++ + ++ + A EL +EM I D VTY +
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL ++ +++D M+ + + L+ FC RV+ G+ L+ + RG
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ + L+ G G ++A E QM
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/298 (23%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K + + + F +ER+ GIR + L+ C +A + +
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERK---GIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T + LL F ++G V + + EMV P +VTY+ I+G C
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F+ M CL + + TLI+G + + +LF EM +R L + YN +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + D++ A E +M+ I D TY+ + GL + LE +++ M + +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T +++ C +V+ +L+ L +G P +++GLC++G E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 109/240 (45%), Gaps = 17/240 (7%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSR 148
K T ++ DAF K +L +A EL + R P ++T S+ ++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVL-------EAKELFEEMVRMSIDPDIVTYSSL---ING 304
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ +E + FD M + + +N L+ FC K +++ +F ++ R
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLA----DVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
N T N L+ GF ++GDV + F+ +M G P + TYNI + G C G A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+FE+M++ + T TT+I G + +A LF + + LKPDI Y M+S L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 13/297 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
A +FFK ++ P + ++ L + A L+S + ++ P+++T S
Sbjct: 209 AFDFFK-EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY---S 264
Query: 144 IMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+L K E E F+ M R I I + S L+ C + EA +F
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS-----LINGLCLHDRIDEANQMFD 319
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++S+ + + N L+ GF ++ V + EM RG + VTYN I G+ + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A F +M+ P + T L+ G + +A +F++M KR + DI Y
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+I + + + A L + K + D VTY TM GL L V LY +M
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYN--------------------------IRIDGY------ 257
A+++F + R F PS+V +N IR D Y
Sbjct: 69 AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 258 -CKKGCF--GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C CF A+ + +M ++ P TI +L++G + A L D+M + K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PDI AYNA+I SL + + +N A + E+E K I + VTY + GL SS +L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
MI+ K P T L+ F N +V L+ ++ P L+ GLC
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCL 307
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
R +EA + M+ + SY L +A +++ED
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA---KRVED 348
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA+ LF +M + PS+ L+ ++ L +M ++ D+ +N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ C ++ A+ ++ +M + D VT ++ G + + + L D+M+E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P ++ C RV+ + + + +G P+ LV GLC+ RW +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDRM 482
M+ ++ + +Y L V+ A E E++ RM
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g12775, mitochondrial; Flags: Precursor
gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
multiple PPR PF|01535 repeats. EST gb|AI999079 comes
from this gene [Arabidopsis thaliana]
gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 644
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/370 (23%), Positives = 166/370 (44%), Gaps = 10/370 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + L+++ + A EL+ ++ + L +K SI++ + K S +
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVK-YSIIIDGLCKDGSLDNA 282
Query: 159 LEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
F+ ME I+ F ++ +N L+ FC + + ++ R +PN T
Sbjct: 283 FNLFNEME------IKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++L+ F + G + + EM+ RG P+ +TYN IDG+CK+ +A+++ + M
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P + T LI+G I +LF EM R + + YN ++ + L
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L EM +R+ D V+Y + GL + LE +++ ++ + K ++++
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIH 516
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C +VD +L+ L +G A +++++ LC + +A ++M
Sbjct: 517 GMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAP 576
Query: 456 SEASYRMLQR 465
E +Y +L R
Sbjct: 577 DELTYNILIR 586
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 132/304 (43%), Gaps = 21/304 (6%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEE 157
F+ D+F K ++R DQ + M +QR P+ +T S+ + K EE
Sbjct: 336 FSVLIDSFVKE----GKLREADQLLKEM--MQRGIAPNTITYNSL---IDGFCKENRLEE 386
Query: 158 TLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNK 213
++ D M I K + FN+L+ +C + + +F ++ L N
Sbjct: 387 AIQMVDLM-------ISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTV 439
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ GF +SG + + + EMV R RP +V+Y I +DG C G A+ +F ++
Sbjct: 440 TYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKI 499
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E+ + +IHG + A LF +P + +K D AYN MIS L R L
Sbjct: 500 EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSL 559
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A L +M E+ D +TY+ + + +L + M F TV M+
Sbjct: 560 SKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMV 619
Query: 394 MKFF 397
+
Sbjct: 620 INML 623
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/365 (23%), Positives = 151/365 (41%), Gaps = 40/365 (10%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A +L + ++ P L T+ + + S I+K + YE L +ME + GI
Sbjct: 70 DDAVDLFRDMIQSRP-LPTVIDFNRLFSAIAKTKQYELVLALCKQMESK---GI-AHSIY 124
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++++ FC +++ A F+ K M +
Sbjct: 125 TLSIMINCFCRCRKLSYA----------FSTMGKIMKL---------------------- 152
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G+ P V +N ++G C + +A+ L + M + P+L T+ TL++G L +
Sbjct: 153 --GYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVS 210
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L D M + +P+ Y +++ + + AMEL+ +MEE+ I D V Y +
Sbjct: 211 DAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIII 270
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ L++ M F T L+ FC R D G L +I R
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLED 478
P+ +L+ G+ EA + K+M+ R + +Y L + N E ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390
Query: 479 LDRMI 483
+D MI
Sbjct: 391 VDLMI 395
>gi|410109899|gb|AFV61029.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
micrantha]
Length = 431
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 93/352 (26%), Positives = 157/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + EM+++G P+ VT+ IDG+CK
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMHRDGHAPSVVTYNVLMNG 431
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 38/406 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH ++ M H TH L KS+ +++SR K + +
Sbjct: 9 SPANSTFRHTLH----------SYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVF 58
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V F+ L+ A+ +++A + L+R + P
Sbjct: 59 AAVLETKGNQRSDIYV---------FSGLITAYLESGFLRDAIECY--RLTREHKLWVPF 107
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK G A +
Sbjct: 108 DTCRKVLEHLMKLKYFKLVWG---FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSV 164
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+ + + PS+ + TL++G + ++ + +L M ++PD+ Y+ +I+ L +
Sbjct: 165 FDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCK 224
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A EL DEM K + + VT+ T+ G K+ ++ ++Y +M+ +P T
Sbjct: 225 ESKMDGANELFDEMLVKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLIT 284
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C + +L + +G P L+ G C G + AFE K+M+
Sbjct: 285 YNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMI 344
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV-LPPPT 494
++ + +Y L L Q + D ++M++ + +V L P T
Sbjct: 345 QENIRLDDVAYTALISGLCQEG---RSVDAEKMLREMLSVGLKPDT 387
>gi|225461528|ref|XP_002282646.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Vitis vinifera]
Length = 546
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 175/398 (43%), Gaps = 34/398 (8%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ---HPHFTPTPDAFEKTLHILARMRYFD 120
L+ LV +VL R S+ A FF + + ++P + L IL RMR F
Sbjct: 116 LTDDLVLDVLKR---HRSDWRPAYVFFNWASRCGIESGYSPGCGVHNEILDILGRMRRFH 172
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ +L + + L+ ++ ++L+R + EE ++ F++ + F +
Sbjct: 173 EMTQLFDEMSK-RKGLVNERTFGVLLNRYAAAHKTEEAVKIFNKRKGLGF----ELDLIA 227
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
F LL + C K ++ A +F + F P+ K+MN++L G+ G + + F+++++
Sbjct: 228 FQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWNDIIT 287
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+P TY I I+ K G A++LF+ M C P + +I + I +
Sbjct: 288 SKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKKRIPE 347
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A ++ EM +R+ +PD+ YN++I L + + EL+D+ME+K + TY +
Sbjct: 348 ALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYGYLLK 407
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID----- 415
K + G+ + +R M C N + L ++ WGY +
Sbjct: 408 STKKPEEVPGILERMERN------------GCRMNSDCYNLILKLYMD-WGYELKLRSTL 454
Query: 416 -----RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P +++ GL +GR ++A KQM
Sbjct: 455 DEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQM 492
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 102/238 (42%), Gaps = 1/238 (0%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G+ P +N +D + F + +LF+EM + L + +T L++ +A
Sbjct: 150 GYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLVNERTFGVLLNRYAAAHKTEEA 209
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++F++ + D+ A+ ++ SL R + + A E + ++ D + + + G
Sbjct: 210 VKIFNKRKGLGFELDLIAFQTLLMSLCRYKHVEMA-EFLFHSKKNEFPPDIKSMNVILNG 268
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + ++ +I K P T + + ++ + L+ + ++G P
Sbjct: 269 WCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPD 328
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ LC + R EA E ++M R Q A+Y L ++L + EK+ +L
Sbjct: 329 VAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At5g59900
gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 907
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 160/348 (45%), Gaps = 29/348 (8%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYE 156
F+P+ A + L + ++A L+ V P+L ++ + + K + +
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNAL---IDSLCKGRKFH 384
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-----RFAPN 211
E FDRM + +G+R +++L+ FC + ++ A S +++ P
Sbjct: 385 EAELLFDRMGK---IGLRP-NDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPY 440
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
N +N G + GD++A E F EM+ + P+VVTY + GYC KG A+RL+
Sbjct: 441 NSLIN----GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYH 496
Query: 272 EMERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
EM PS+ T TTL+ G AGL+R+ A +LF+EM + N+KP+ YN MI
Sbjct: 497 EMTGKGIAPSIYTFTTLLSGLFRAGLIRD---AVKLFNEMAEWNVKPNRVTYNVMIEGYC 553
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
D++ A E + EM EK I D +Y + GL + D + +G
Sbjct: 554 EEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEI 613
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ FC +++ L++ ++ RG LDL+ G+ G
Sbjct: 614 CYTGLLHGFCREGKLEEALSVCQEMVQRGV-----DLDLVCYGVLIDG 656
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 124/283 (43%), Gaps = 32/283 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C++ ++ +A ++ ++ + AP+ T LL G +G + ++EM
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMA 534
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P+ VTYN+ I+GYC++G A +EM +P + LIHG L
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT-- 357
+A+ D + K N + + Y ++ R L A+ + EM ++ + D V Y
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 358 ----------MFFGLMK---SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+FFGL+K GL+ +Y MI+ K KT +F+
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAK--SKTG-----------DFKEA 701
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA-FECSK 446
G +W +I+ G P+ ++ GLC G EA CSK
Sbjct: 702 FG--IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSK 742
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/413 (21%), Positives = 165/413 (39%), Gaps = 15/413 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKS 141
L + FK + P LH L + R+F A EL + + P +
Sbjct: 173 LDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTG 232
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ L + +E + + ++ + +NVL+ C ++++ EA +
Sbjct: 233 VIRSLCELKDLSRAKEMIAHMEATGCDVNI-------VPYNVLIDGLCKKQKVWEAVGIK 285
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L + P+ T L+ G + + +EM + LR F PS + ++G K
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR-FSPSEAAVSSLVEGLRK 344
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G +A+ L + + P+L LI R H+A LFD M K L+P+
Sbjct: 345 RGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVT 404
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y+ +I R L+ A+ + EM + + Y+++ G K + MI
Sbjct: 405 YSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMI 464
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
K P T LM +C +++ L L+ + +G P + L++GL G
Sbjct: 465 NKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIR 524
Query: 440 EAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+A + +M + + +Y M++ Y + + ++ E L M + + ++P
Sbjct: 525 DAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE--KGIVP 575
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 128/296 (43%), Gaps = 9/296 (3%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLS 206
+ K Q +E LE D M +F E V L++ + +++EA ++ +++
Sbjct: 307 LCKVQEFEIGLEMMDEML------CLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 207 -RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+PN N L+ + E+ + M G RP+ VTY+I ID +C++G
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ EM S+ +LI+G +I A EM + L+P + Y +++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+N A+ L EM K I T+ T+ GL ++ + KL++ M E P
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T ++++ +C + + ++G P ++ L+ GLC G+ EA
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 126/291 (43%), Gaps = 8/291 (2%)
Query: 166 EREIFVGIRKFGSEEFN-----VLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILL 219
E ++FV G+ E N LL FC + +++EA SV +++ R + +L+
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLI 654
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G + D EM RG +P V Y ID K G F +A +++ M C+
Sbjct: 655 DGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR-DLNAAME 338
P+ T T +I+G +++A L +M + P+ Y + L + D+ A+E
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVE 774
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L + + K + + TY+ + G + +E +L RMI P T ++ C
Sbjct: 775 LHNAIL-KGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELC 833
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
V + LW + ++G P A + L+ G C G +A E +ML
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/311 (23%), Positives = 129/311 (41%), Gaps = 10/311 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F LL +++A +F ++ PN T N+++ G+ E GD++ F EM
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMT 569
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +Y I G C G +A + + + C + T L+HG +
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM +R + D+ Y +I ++ +D L+ EM ++ + D+V Y +M
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMI 689
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K+ + ++D MI VP T ++ C V+ L +
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSV 749
Query: 420 P----HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANE 474
P +G LD+L G ++A E +L + + A+Y ML R + Q E
Sbjct: 750 PNQVTYGCFLDILTKGEVD---MQKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRIEE 805
Query: 475 KLEDLDRMIKN 485
E + RMI +
Sbjct: 806 ASELITRMIGD 816
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 83/362 (22%), Positives = 135/362 (37%), Gaps = 56/362 (15%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
NV+ + + KA EF K + P ++ +H L QA E V
Sbjct: 546 NVMIEGYCEEGDMSKAFEFLK-EMTEKGIVPDTYSYRPLIHGLCLT---GQASEAKVFVD 601
Query: 131 RTHPSLLTLKSMSI--MLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQA 187
H L + +L + EE L M +R + + + +G VL+
Sbjct: 602 GLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYG-----VLIDG 656
Query: 188 FCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
K+ R +F LL P++ ++ ++GD + M+ G
Sbjct: 657 SLKHKD----RKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI------------- 289
P+ VTY I+G CK G +A L +M+ V+ +P+ T +
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772
Query: 290 ---HGA---GLVRN----------------IHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
H A GL+ N I +A +L M + PD Y MI+ L
Sbjct: 773 VELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINEL 832
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R D+ A+EL + M EK I D V Y+T+ G + + +L + M+ +P
Sbjct: 833 CRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNN 892
Query: 388 RT 389
+T
Sbjct: 893 KT 894
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 9/216 (4%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
M+ SK ++E +D M E V + ++ C + EA + K+
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVP----NEVTYTAVINGLCKAGFVNEAEVLCSKM 743
Query: 205 LSRFAPNNKTMNILLLGFKESGDV---TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ N+ L G+V A+E+ H +L+G + TYN+ I G+C++G
Sbjct: 744 QPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL--HNAILKGLLANTATYNMLIRGFCRQG 801
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A L M P T TT+I+ ++ +A +L++ M ++ ++PD AYN
Sbjct: 802 RIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYN 861
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+I ++ A EL +EM + + +N T T
Sbjct: 862 TLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSRT 897
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/353 (20%), Positives = 140/353 (39%), Gaps = 49/353 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV+++ +C + +M +A ++ + P+ + L+ G +G + ++F +
Sbjct: 545 YNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLH 604
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + Y + G+C++G +A+ + +EM + L LI G+ H
Sbjct: 605 KGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGS----LKH 660
Query: 300 QARQLF----DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ R+LF EM R LKPD Y +MI + + D A + D M + + VTY
Sbjct: 661 KDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTY 720
Query: 356 HTMFFGLMKSS------------------------------------GLEGVCKLYDRMI 379
+ GL K+ ++ +L++ ++
Sbjct: 721 TAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAIL 780
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+G + T T ML++ FC R++ L +I G P ++ LC R +
Sbjct: 781 KG-LLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVK 839
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLP 491
+A E M + + +Y L A K +L + M++ Q ++P
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR--QGLIP 890
>gi|15220166|ref|NP_178170.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75264854|sp|Q9M8M3.1|PP136_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g80550, mitochondrial; Flags: Precursor
gi|6730729|gb|AAF27119.1|AC018849_7 unknown protein; 31926-33272 [Arabidopsis thaliana]
gi|332198297|gb|AEE36418.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 448
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/391 (25%), Positives = 182/391 (46%), Gaps = 13/391 (3%)
Query: 66 STLVENVLGRLFAAHSNGL-KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S+ + + +SN KALEFF + + F T + F + + IL + F+ +W
Sbjct: 43 SSYDQKTVCEALTCYSNDWQKALEFFNWVERESGFRHTTETFNRVIDILGKYFEFEISWA 102
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
L++ + S+ + I+ R +E ++A+D+++ +R S F L
Sbjct: 103 LINRMIGNTESVPNHVTFRIVFKRYVTAHLVQEAIDAYDKLDD---FNLRDETS--FYNL 157
Query: 185 LQAFCTQKEMKEARSV-FVK--LLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ A C K + EA + F K + + F+ N K N++L G+ + G + ++ +M
Sbjct: 158 VDALCEHKHVVEAEELCFGKNVIGNGFSVSNTKIHNLILRGWSKLGWWGKCKEYWKKMDT 217
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G + +Y+I +D CK G A++L++EM+ + T+I G + +
Sbjct: 218 EGVTKDLFSYSIYMDIMCKSGKPWKAVKLYKEMKSRRMKLDVVAYNTVIRAIGASQGVEF 277
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
++F EM +R +P++ +N +I L + A ++DEM ++ D++TY +F
Sbjct: 278 GIRVFREMRERGCEPNVATHNTIIKLLCEDGRMRDAYRMLDEMPKRGCQPDSITYMCLFS 337
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K S + L+ RMI PK T VMLM+ F + L +W + + G P
Sbjct: 338 RLEKPS---EILSLFGRMIRSGVRPKMDTYVMLMRKFERWGFLQPVLYVWKTMKESGDTP 394
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
A + ++ L +G + A E ++M+ R
Sbjct: 395 DSAAYNAVIDALIQKGMLDMAREYEEEMIER 425
>gi|224085974|ref|XP_002307761.1| predicted protein [Populus trichocarpa]
gi|222857210|gb|EEE94757.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 172/382 (45%), Gaps = 9/382 (2%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ LS +V VL R + G + FF + ++ P + D++ + L R ++ D
Sbjct: 128 SVDLSLDVVAEVLNR---GNLGGEAMIMFFNWAIKQPMISKDVDSYNVVIRALGRRKFID 184
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ + H R + ++ SI++ + + + + ++ F +E E G + +E
Sbjct: 185 FMVKFL-HELRVEGVSMNSETFSIVIDSLVRARRVYKAIQMFGNLEEEF--GFER-DAES 240
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
NVLLQ C + + A S F + + N T N+++ G+ + G V+ M+ + EM
Sbjct: 241 LNVLLQCLCRRSHVGAANSYFNSVKGKIPFNCMTYNVIIGGWSKFGRVSEMQRVFEEMEE 300
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF P ++++ ++G + G DA+ +F ME C+P +I V N +
Sbjct: 301 DGFSPDCLSFSYLLEGLGRAGKIEDAVMIFGSMEEKGCVPDTNVYNAMISNFISVGNFDE 360
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
+ + + +N P+I Y MIS LI+ + A+E+ DEM ++ + T +
Sbjct: 361 CMKYYRCLLSKNCDPNIDTYTRMISGLIKASKVADALEMFDEMLDRGMVTKTGTVTSFIE 420
Query: 361 GLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L +Y + + G + + ++LM+ + + L +W + + G+
Sbjct: 421 PLCSFGPPHAAMVIYTKARKVGCKISLSAYKLLLMRLSRFG-KCGMMLKIWDEMQESGYS 479
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
+ L++GLC+ G++E A
Sbjct: 480 SDMEVYEYLISGLCNIGQFENA 501
>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 586
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 151/337 (44%), Gaps = 11/337 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A + + HP T+ + +L+ I+K + Y ++M+ GI
Sbjct: 50 LDDALSSFNRMLHMHPPPSTV-DFNRLLTSIAKTKQYPTVFSLSNQMDS---FGIPP-DV 104
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
N+L+ +FC + A SV K+L P+ T L+ G G + + +
Sbjct: 105 YTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDK 164
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ GF+P+VVTY I+G CK G A+RL ME+ C P + T++I R
Sbjct: 165 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 224
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A LF +M + + PDI Y ++I SL + L+++M +I D V + T
Sbjct: 225 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 284
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L K + + D MI P T LM C+ +D + ++ ++ G
Sbjct: 285 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 344
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA---FE--CSKQML 449
+ P+ + + L+ G C R ++A FE C K+++
Sbjct: 345 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI 381
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 163/392 (41%), Gaps = 15/392 (3%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P + + L + R +A+ L S + Q P + T S+ L +
Sbjct: 199 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 258
Query: 151 KFQSYEETLEAF--DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+++ L ++ ++ + F+ ++ A C + ++ EA V ++ R
Sbjct: 259 EWKHVTTLLNQMINSKIMPDVVI---------FSTVVDALCKEGKITEAHDVVDMMIIRG 309
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T N L+ G ++ + MV G+ P+V++YN I+GYCK A
Sbjct: 310 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 369
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
LFEEM + +P+ T TL+H + R + A LF EM PD+ Y ++ L
Sbjct: 370 YLFEEMCQKELIPNTVTYNTLMHXCHVGR-LQDAIALFHEMVAHGQIPDLATYRILLDYL 428
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ L+ AM L+ +E + D Y + G+ ++ LE ++ + P
Sbjct: 429 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 488
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
RT +++ C +D L+ + G P G + + GL A + ++
Sbjct: 489 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 548
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
ML R ++ +L L ++ ++ +
Sbjct: 549 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQI 580
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 158/355 (44%), Gaps = 14/355 (3%)
Query: 126 MSHVQRTHPSLLTLKSMS---------IMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
+ V T+ ++ L+SM + S I + EAF+ + + GI
Sbjct: 184 LCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISP- 242
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ L+ + C E K ++ +++ S+ P+ + ++ + G +T
Sbjct: 243 DIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVV 302
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M++RG P+VVTYN +DG+C + +A+++F+ M P++ + TLI+G +
Sbjct: 303 DMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKI 362
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + +A LF+EM ++ L P+ YN ++ R L A+ L EM D TY
Sbjct: 363 QRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHVGR-LQDAIALFHEMVAHGQIPDLATY 421
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ L K S L+ L + IEG + P + +++ C ++ +++ L
Sbjct: 422 RILLDYLCKKSHLDEAMALL-KTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLS 480
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+G P+ +++ GLC RG +EA + +M +Y + + L+Q
Sbjct: 481 SKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/318 (24%), Positives = 140/318 (44%), Gaps = 5/318 (1%)
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
S+ F + ++ L +F+RM + +FN LL + K+ S+ ++ S
Sbjct: 42 SKSLNFNTLDDALSSFNRMLHMH----PPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDS 97
Query: 207 -RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
P+ T+NIL+ F + +++ G +P T+ I G C +G GD
Sbjct: 98 FGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGD 157
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ LF++M P++ T TLI+G V N + A +L M + N +PD+ Y ++I
Sbjct: 158 ALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIID 217
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
SL + R + A L +M + I D TY ++ L + V L ++MI K +P
Sbjct: 218 SLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMP 277
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
++ C ++ ++ +I RG P+ + L+ G C + +EA +
Sbjct: 278 DVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVF 337
Query: 446 KQMLVRRRQVSEASYRML 463
M+ + SY L
Sbjct: 338 DTMVHNGYAPNVISYNTL 355
>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Cucumis sativus]
Length = 590
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 89/325 (27%), Positives = 144/325 (44%), Gaps = 8/325 (2%)
Query: 160 EAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKT 214
E R + IF IRK G + FN L+ C + + E R +R P+ T
Sbjct: 236 EGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFT 295
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
++L+ G + G + E + EM RG RP+ +T+ IDG + AM + +M
Sbjct: 296 YSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQML 355
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P L TL++G V ++++AR+L DEM +KPD Y +I + DL
Sbjct: 356 TMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLE 415
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+AME+ M E+ + DNV + + G + + + M+E P T M++
Sbjct: 416 SAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVI 475
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C V +G L + G P ++L+ GLC +G+ + A + ML
Sbjct: 476 DGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVT 535
Query: 455 VSEASYRMLQRYLVQANANEKLEDL 479
+ +Y +L L N K EDL
Sbjct: 536 PDDITYNIL---LEGHCKNGKAEDL 557
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 5/302 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ FC + +++A+ +F ++ R P + N L+ G +S ++ M
Sbjct: 226 YNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTME 285
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TY++ I G CK+G A +LF+EM++ P+ T T LI G R +
Sbjct: 286 ENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMD 345
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + +M +KPD+ YN +++ L + D+N A +L+DEM+ + D +TY T+
Sbjct: 346 SAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLI 405
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K LE ++ M E V L+ FC + RV +++ G
Sbjct: 406 DGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMK 465
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ----ANANEK 475
P +++ G C +G + F+ K+M + + +Y +L L + NAN
Sbjct: 466 PDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANML 525
Query: 476 LE 477
LE
Sbjct: 526 LE 527
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P + NIL+ F + G + ++ ++E+ RG RP+ V++N I+G CK +
Sbjct: 219 FPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGF 278
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
RL + ME P + T + LIHG + A QLFDEM +R L+P+ + A+I
Sbjct: 279 RLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQ 338
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R R +++AM +M + D V Y+T+ GL K + KL D M P
Sbjct: 339 YRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDK 398
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ +C ++ + + + + G A L++G C GR +A ++
Sbjct: 399 ITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLRE 458
Query: 448 MLVRRRQVSEASYRML 463
M+ + +A+Y M+
Sbjct: 459 MVEAGMKPDDATYTMV 474
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/312 (23%), Positives = 124/312 (39%), Gaps = 45/312 (14%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT +F ++ L + R D+ + L ++ R +P + T S+++ + K +
Sbjct: 256 PTTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTY---SVLIHGLCKEGRLDVA 312
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+ FD M++ G+R G F L+ + M A + + ++L+ P+ N
Sbjct: 313 EQLFDEMQQR---GLRPNGIT-FTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNT 368
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG---------------- 261
LL G + GDV EM + G +P +TY IDGYCK+G
Sbjct: 369 LLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEG 428
Query: 262 -------------------CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
DA R EM P T T +I G N+
Sbjct: 429 VVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGF 488
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L EM KP + YN +++ L + + A L++ M + D++TY+ + G
Sbjct: 489 KLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGH 548
Query: 363 MKSSGLEGVCKL 374
K+ E + KL
Sbjct: 549 CKNGKAEDLLKL 560
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 116/308 (37%), Gaps = 27/308 (8%)
Query: 186 QAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
Q++C A +F + S I+ G +A +F + G R
Sbjct: 102 QSYCAMANFLSAHQMFQECQS----------IIRFLVSRKGKDSAASVFAAILDTAGTRC 151
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG--LVRNIHQARQ 303
S ++ + Y G DA++ F + HG G L + I+
Sbjct: 152 SNFVFDALMIAYWDSGFVSDAIQCFRLVRN-------SNFQIPFHGCGYLLDKMINSNSP 204
Query: 304 L-----FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ + E+ + P + YN +I+ + + A + +E+ ++ + V+++T+
Sbjct: 205 VTIWTFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTL 264
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL KS L+ +L M E + P T +L+ C R+D+ L+ + RG
Sbjct: 265 INGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGL 324
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ---ANANEK 475
P+G L+ G R + A QML + Y L L + N K
Sbjct: 325 RPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARK 384
Query: 476 LEDLDRMI 483
L D +M+
Sbjct: 385 LVDEMKMV 392
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
+R RE+ K + +++ +C + +K + ++ ++ P T N+L+ G
Sbjct: 453 ERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNG 512
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ G + M M+ G P +TYNI ++G+CK G D ++L E
Sbjct: 513 LCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNE 563
>gi|410109913|gb|AFV61036.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
aristata]
Length = 431
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ I D V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGXKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 248
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 449 LVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
V+ + + +Y ++ + + + E RMI+
Sbjct: 309 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 345
>gi|255660838|gb|ACU25588.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 418
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 99/342 (28%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
ALE F+ T +H + P D K L +++YF W + + +P+ +L +I
Sbjct: 85 ALECFRLTREHKFWVPF-DTCRKVLEHFMKLKYFKSVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 142 LMHRFCK--------EGEMRLAQSVFDEITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F EM+ G P+ VT+ IDG+C
Sbjct: 194 KSAMHGSGIQPDVYTYSVLINGLCKESKMNDANELF-DEMIGNGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++EM R P L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 253 KTGSIDLAMEAYKEMLRQGFSPDLITYNTLIYGLCKEGDLKQAQDLIDEMSMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A + M ++ I D+V Y + GL + G K+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ P T M++ FC V +G L + G P
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVP 414
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/399 (23%), Positives = 174/399 (43%), Gaps = 27/399 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH L K++ I++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKT 214
E LEA +++V F+ L+ A+ + +A F + +F T
Sbjct: 53 EAILEAKGAQRSDVYV---------FSGLITAYLESGFLHDALECFRLTREHKFWVPFDT 103
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+L F + ++ FY E++ G+ S+ +NI + +CK+G A +F+E+
Sbjct: 104 CRKVLEHFMKLKYFKSVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEIT 163
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ PS+ + TL++G + ++ + +L M ++PD+ Y+ +I+ L + +N
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHGSGIQPDVYTYSVLINGLCKESKMN 223
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL DEM + + VT+ T+ G K+ ++ + Y M+ F P T L+
Sbjct: 224 DANELFDEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMEAYKEMLRQGFSPDLITYNTLI 283
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + +L + +G P L+ G C G E AF+ K+M+ +
Sbjct: 284 YGLCKEGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFKYKKRMIKENIR 343
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ + +Y L L + + E +M++ + +V P
Sbjct: 344 LDDVAYTALISGLCREGQSVGAE---KMLREMLSVGLKP 379
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 46/105 (43%), Gaps = 1/105 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +++ A +++ ++ L+ G G E EM+
Sbjct: 314 YTTLIDGSCKEGDLETAFKYKKRMIKENIRLDDVAYTALISGLCREGQSVGAEKMLREML 373
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +P TY + I+ +CKKG +L +EM+R +P + T
Sbjct: 374 SVGLKPDNGTYTMIINEFCKKGDVKMGSKLLKEMQRDGHVPCVVT 418
>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
Length = 548
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 157/331 (47%), Gaps = 6/331 (1%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+ A +L S + ++ P ++ + +LS I K + Y+ + +ME +GIR
Sbjct: 66 LNDAIDLFSDMVKSRP-FPSIVDFNRLLSAIVKLKKYDVVISLGKKME---VLGIRN-DL 120
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
FN+++ FC ++ A S+ K+L + P+ T+ L+ GF V+ +
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G++P +V YN ID CK DA F+E+ER P++ T T L++G
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A +L +M K+ + P++ Y+A++ + ++ + A EL +EM I D VTY +
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL ++ +++D M+ + + L+ FC RV+ G+ L+ + RG
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ + L+ G G ++A E QM
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 133/298 (44%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K + + + F +ER+ GIR + L+ C +A + +
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERK---GIRP-NVVTYTALVNGLCNSSRWSDAARLLSDM 251
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T + LL F ++G V + + EMV P +VTY+ ++G C
Sbjct: 252 IKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRI 311
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F+ M CL + + TLI+G + + +LF EM +R L + YN +
Sbjct: 312 DEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTL 371
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + D++ A E +M+ I D TY+ + GL + LE +++ M + +
Sbjct: 372 IQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREM 431
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T +++ C +V+ +L+ L +G P +++GLC++G E
Sbjct: 432 DLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEV 489
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 121/267 (45%), Gaps = 17/267 (6%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSR 148
K T ++ DAF K +L +A EL + R P ++T S+ ++
Sbjct: 255 KITPNVITYSALLDAFVKNGKVL-------EAKELFEEMVRMSIDPDIVTYSSL---VNG 304
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ +E + FD M + + +N L+ FC K +++ +F ++ R
Sbjct: 305 LCLHDRIDEANQMFDLMVSKGCLA----DVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
N T N L+ GF ++GDV + F+ +M G P + TYNI + G C G A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+FE+M++ + T TT+I G + +A LF + + LKPDI Y M+S L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGL 480
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVT 354
L+ L +M+++ + ++ T
Sbjct: 481 CTKGLLHEVEALYTKMKQEGLMKNDCT 507
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/297 (25%), Positives = 125/297 (42%), Gaps = 13/297 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
A +FFK ++ P + ++ L + A L+S + ++ P+++T S
Sbjct: 209 AFDFFK-EIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITY---S 264
Query: 144 IMLSRISKFQSYEETLEAFDRMER-EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+L K E E F+ M R I I + S L+ C + EA +F
Sbjct: 265 ALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS-----LVNGLCLHDRIDEANQMFD 319
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++S+ + + N L+ GF ++ V + EM RG + VTYN I G+ + G
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A F +M+ P + T L+ G + +A +F++M KR + DI Y
Sbjct: 380 DVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYT 439
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+I + + + A L + K + D VTY TM GL L V LY +M
Sbjct: 440 TVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKM 496
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 117/284 (41%), Gaps = 39/284 (13%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYN--------------------------IRIDGY------ 257
A+++F + R F PS+V +N IR D Y
Sbjct: 69 AIDLFSDMVKSRPF-PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 258 -CKKGCF--GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
C CF A+ + +M ++ P TI +L++G + A L D+M + K
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PDI AYNA+I SL + + +N A + E+E K I + VTY + GL SS +L
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
MI+ K P T L+ F N +V L+ ++ P LV GLC
Sbjct: 248 LSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCL 307
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
R +EA + M+ + SY L +A +++ED
Sbjct: 308 HDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKA---KRVED 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 94/224 (41%), Gaps = 4/224 (1%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA+ LF +M + PS+ L+ ++ L +M ++ D+ +N
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ C ++ A+ ++ +M + D VT ++ G + + + L D+M+E
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P ++ C RV+ + + + +G P+ LV GLC+ RW +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDRM 482
M+ ++ + +Y L V+ A E E++ RM
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRM 289
>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 579
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 4/299 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++L+ +FC + A SV K+L P+ T L+ G G + + +M+
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMI 158
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GFRP VVTY I+G CK G A+RL M + C P++ T+I R +
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM + + PDI YN++I +L + L++EM + +I D V+++T+
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + + D+MI+ P T LM C+ +D + ++ ++ +G
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ + + L+ G C R ++A +M + +Y L L E+L+D
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHV---ERLQD 394
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 87/384 (22%), Positives = 161/384 (41%), Gaps = 10/384 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P A+ + L + R +A+ L S + + P + T S+ L + +++
Sbjct: 199 PNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATL 258
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L + ++ +I + FN ++ A C + ++ EA V K++ R PN T
Sbjct: 259 LN--EMVDSKIMPDVV-----SFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G ++ + MV +G P+V++YN I+GYCK AM LF EM R
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 371
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P T +TLIHG V + A LF EM + P++ Y ++ L + R L AM
Sbjct: 372 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAM 431
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L+ +E + D + G+ ++ LE L+ + P T +++
Sbjct: 432 ALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGL 491
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C +D L+ + + G +G + + G A + ++M+ R
Sbjct: 492 CRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADA 551
Query: 458 ASYRMLQRYLVQANANEKLEDLDR 481
++ + + L ++ L+ + R
Sbjct: 552 STMTLFVKMLSDDGLDQSLKQILR 575
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/275 (22%), Positives = 118/275 (42%), Gaps = 1/275 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ N LL + + + H+M G P++ T +I I+ +C G A +
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
++ ++ P T TTLI G + I +A LFD+M +PD+ Y +I+ L +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ +AA+ L+ M +K + Y+T+ L K + L+ M+ P T
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C L ++D P + + +V LC G+ EA + +M+
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298
Query: 450 VRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMI 483
R + + +Y ++ + + + +E ++ D M+
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMV 333
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/188 (20%), Positives = 77/188 (40%), Gaps = 4/188 (2%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ F M R+ PS L+ +++ L +M + P+I + +I+
Sbjct: 45 AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
S + A ++ ++ ++GH D T+ T+ G+ + L+D+MI F
Sbjct: 105 SFCHLNRVGFAFSVLAKI--LKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T L+ C + L G ++ + P+ A + ++ LC + EAF
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222
Query: 444 CSKQMLVR 451
+M+ +
Sbjct: 223 LFSEMVTK 230
>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 915
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 140/288 (48%), Gaps = 8/288 (2%)
Query: 156 EETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
+E ++ F +M + E F +R + VL+++ C + EA ++ ++ + PN
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTY-----TVLIKSLCGSERKSEALNLVKEMEETGIKPNIH 359
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T +L+ +M+ +G P+V+TYN I+GYCK+G DA+ + E M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E P+ +T LI G N+H+A + ++M +R + PD+ YN++I R +
Sbjct: 420 ESRKLSPNTRTYNELIKGY-CKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
++A L+ M ++ + D TY +M L KS +E C L+D + + P L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +C +VD + ++ + P+ + L+ GLC+ G+ +EA
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA 586
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 85/346 (24%), Positives = 153/346 (44%), Gaps = 7/346 (2%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
A+ +H L R D+A +L + + T+++ ++++ + + E L
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKE 348
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK 223
ME GI+ + VL+ + C+Q + ++AR + ++L + PN T N L+ G+
Sbjct: 349 MEE---TGIKP-NIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYC 404
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ G + M R P+ TYN I GYCK AM + +M LP +
Sbjct: 405 KRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVV 463
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T +LI G N A +L M R L PD Y +MI SL + + + A +L D +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
E+K + + V Y + G K+ ++ + ++M+ +P + T L+ C + ++
Sbjct: 524 EQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKL 583
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L ++ G P +L+ L G ++ A+ +QML
Sbjct: 584 KEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQML 629
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + +++A V + SR +PN +T N L+ G+ +S AM + ++M+
Sbjct: 396 YNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVL-NKML 454
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P VVTYN IDG C+ G F A RL M +P T T++I + +
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVE 514
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LFD + ++ + P++ Y A+I + ++ A ++++M K +++T++ +
Sbjct: 515 EACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALI 574
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL L+ L ++M++ P T +L+ + D + + ++ G
Sbjct: 575 HGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTK 634
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
P H + C GR +A + M+ + R+
Sbjct: 635 PDAHTYTTFIQTYCREGRLLDA----EDMMAKMRE 665
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/434 (20%), Positives = 181/434 (41%), Gaps = 53/434 (12%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY 118
P + S + + + LF+ + AL F + Q+P + + ++ L +L Y
Sbjct: 79 PSLKSMVSAISPSHVSSLFSLDLDPKTALNFSHWISQNPRYKHSVYSYASLLTLLINNGY 138
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
+++ + ++ S+ + + +++K + +E ++ ++ +G
Sbjct: 139 VGVVFKIRLLMIKSCDSVGDALYVLDLCRKMNKDERFE--------LKYKLIIGC----- 185
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N LL + + E + V++++L + PN T N ++ G+ + G+V + +
Sbjct: 186 --YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSK 243
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+V G P TY I GYC++ A ++F EM C + T LIHG + R
Sbjct: 244 IVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARR 303
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I +A LF +M P + Y +I SL + A+ L+ EMEE I
Sbjct: 304 IDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIK-------- 355
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
P T +L+ C + + L G ++++G
Sbjct: 356 ---------------------------PNIHTYTVLIDSLCSQCKFEKARELLGQMLEKG 388
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P+ + L+ G C RG E+A + + M R+ + +Y L + ++N ++ +
Sbjct: 389 LMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG 448
Query: 478 DLDRMIKNLQAVLP 491
L++M++ + VLP
Sbjct: 449 VLNKMLE--RKVLP 460
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 110/280 (39%), Gaps = 19/280 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ + C K ++EA +F L + PN L+ G+ ++G V + +M+
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ +T+N I G C G +A L E+M ++ P++ T T LIH +
Sbjct: 560 SKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFD 619
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A F +M KPD Y I + R L A ++M +M E + D TY ++
Sbjct: 620 HAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLI 679
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF---------------FCV---NF 401
G + RM + P T + L+K C
Sbjct: 680 KGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMM 739
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
D + L +++ P+ + + L+ G+C G A
Sbjct: 740 EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/388 (20%), Positives = 142/388 (36%), Gaps = 70/388 (18%)
Query: 114 ARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
R FD A+ L+S + P T SM + + K + EE + FD +E++
Sbjct: 473 CRSGNFDSAYRLLSLMNDRGLVPDQWTYTSM---IDSLCKSKRVEEACDLFDSLEQK--- 526
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTA 230
G+ + L+ +C ++ EA + K+LS+ PN+ T N L+ G G +
Sbjct: 527 GVNP-NVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKE 585
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ +MV G +P+V T I I K G F A F++M P T TT I
Sbjct: 586 ATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQ 645
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS-------------LIRCRD----- 332
+ A + +M + + PD+ Y+++I L R RD
Sbjct: 646 TYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEP 705
Query: 333 -----------------------------------LNAAMELMDEMEEKRIGHDNVTYHT 357
+ +EL+++M E + + +Y
Sbjct: 706 SQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEK 765
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G+ + L K++D M + + + V + C + N ++D
Sbjct: 766 LILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKH---NEAAKVVDDM 822
Query: 418 FC----PHGHALDLLVTGLCSRGRWEEA 441
C P + +L+ GL +G E
Sbjct: 823 ICVGHLPQLESCKVLICGLYKKGEKERG 850
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 76/186 (40%), Gaps = 5/186 (2%)
Query: 107 EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
E L ++ M FD EL+ + H KS ++ I + + + FD M+
Sbjct: 729 EPELCAMSNMMEFDTVVELLEKMVE-HSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQ 787
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKES 225
R + + FN LL C K+ EA V ++ P ++ +L+ G +
Sbjct: 788 RNEGISPSEL---VFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKK 844
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
G+ + ++ G+ + + I IDG K+G LF ME+ C S QT
Sbjct: 845 GEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTY 904
Query: 286 TTLIHG 291
+ LI G
Sbjct: 905 SLLIEG 910
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 7/180 (3%)
Query: 188 FCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLR 241
C M E +V V+LL + PN K+ L+LG E G++ A ++F H
Sbjct: 732 LCAMSNMMEFDTV-VELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNE 790
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G PS + +N + CK +A ++ ++M V LP L++ LI G +
Sbjct: 791 GISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERG 850
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F + + D A+ +I + + + A EL + ME+ + TY + G
Sbjct: 851 TSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 775
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ + + +++ A S+F ++ + P + T+ I++ G ++G +++ V
Sbjct: 440 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 499
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF P+ + YN IDG+ K+G A ++ EM V PS T T+LI G NI
Sbjct: 500 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 559
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L ++M ++ LK DI AY +I + RD+ +A EL++E+ + + Y++M
Sbjct: 560 LALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMI 619
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + +E LY +M+ +T L+ + R+ ++ ++ +G
Sbjct: 620 TGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGIL 679
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P A +L+ GLC++G++E A
Sbjct: 680 PDDRAHTVLINGLCNKGQFENA 701
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 149/332 (44%), Gaps = 7/332 (2%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
++A+E S + +T ++ S++ +L K QS++ F+ + F
Sbjct: 314 IEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTF-- 370
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
N LL C + +M EA +++ +++++ +PN + N ++LG ++ A Y E
Sbjct: 371 ---NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 427
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ GF P+ VT+ I +DGY KKG +A +F M+ LP+ T+ +I G
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ R LF++ + P YN +I I+ ++N A + EM E I VTY +
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K + ++ KL + M + L+ FC + L L G
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ + ++TG + EEA + K+M+
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 111/236 (47%), Gaps = 10/236 (4%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQK 192
PS +T S+ + K + + L+ + M+R+ + + I+ +G+ L+ FC ++
Sbjct: 540 PSTVTYTSL---IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT-----LIDGFCKRR 591
Query: 193 EMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+MK A + +L + +PN N ++ GFK +V Y +MV G + TY
Sbjct: 592 DMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYT 651
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
IDG K G A + EM LP + T LI+G AR++ ++M +
Sbjct: 652 SLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGK 711
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
N+ P + YN +I+ + +L A L DEM ++ + DN+TY + G K G
Sbjct: 712 NMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDG 767
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 164/421 (38%), Gaps = 43/421 (10%)
Query: 62 TPLSSTLVEN-VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
T L+S L E+ V+ L S+ AL++F+ + F DA L IL
Sbjct: 73 TSLNSALTESHVINTLLNRKSDPTSALKYFERIKKKIEFAKCTDAVCILLLILTNSAETH 132
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI-FVGIRKFG-- 177
+A L Q + + L +K ++ ++ + +E E F+ + G
Sbjct: 133 RAQYLFD--QFASGKSVRFSCLMDRLVECTKLYNFPLDIQEGNILEAEQHFLQAKARGVE 190
Query: 178 --SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
E +++ + C + A S+ ++ + + P T ++ + G+V
Sbjct: 191 LDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRL 250
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+MV G ++ + GYC +G A+ L E+ +P+ T + LI G
Sbjct: 251 KDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCK 310
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD---------------------- 332
NI +A + + EM + ++ + + N+++ ++C+
Sbjct: 311 NGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTF 370
Query: 333 ------------LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+N A L DE+ K I + V+Y+ + G + + CK+Y M++
Sbjct: 371 NTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLD 430
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
F P T +LM + ++ +++ + D P L +++ GLC GR E
Sbjct: 431 NGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFE 490
Query: 441 A 441
Sbjct: 491 G 491
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/283 (21%), Positives = 102/283 (36%), Gaps = 71/283 (25%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++++ C E R +F K +S+ F P N ++ GF + G++ Y EM
Sbjct: 477 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 536
Query: 242 GFRPSVVTY-----------NIR------------------------IDGYCKKGCFGDA 266
G PS VTY NI IDG+CK+ A
Sbjct: 537 GITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSA 596
Query: 267 MRLFEEMERVACLPS-----------------------------------LQTITTLIHG 291
L E+ P+ L+T T+LI G
Sbjct: 597 HELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDG 656
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ A + EM + + PD A+ +I+ L A +++++M K +
Sbjct: 657 LLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPS 716
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ Y+T+ G K L+ +L+D M++ VP T +L+
Sbjct: 717 VLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/260 (20%), Positives = 101/260 (38%), Gaps = 34/260 (13%)
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ G++ E + + RG Y+I + C K G A+ L EM +P
Sbjct: 170 QEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEG 229
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T T++I N+ +A +L D+M ++ +++ +L +A+ L++E+
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM---------------IEGKF----- 383
E + + VTY + G K+ +E + Y M +EG
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349
Query: 384 --------------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+ T L+ + C +++ NLW +I +G P+ + + ++
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNII 409
Query: 430 TGLCSRGRWEEAFECSKQML 449
G C + A + K+ML
Sbjct: 410 LGHCRKDNINAACKVYKEML 429
>gi|410109897|gb|AFV61028.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
macropoda]
Length = 412
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 72 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 128
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 129 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 180
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 181 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 239
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 240 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKELKPDKI 299
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ I D V Y + GL + K+ M
Sbjct: 300 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 359
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P +RT M++ FC V G L + G P ++L+ G
Sbjct: 360 LNVGLKPDSRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP
Sbjct: 170 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289
Query: 449 LVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
++ + + +Y ++ + + + E RMI+
Sbjct: 290 SMKELKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 326
>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 743
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/408 (25%), Positives = 183/408 (44%), Gaps = 26/408 (6%)
Query: 93 TLQHP--HFTPTPDAFEKTLHILARMRYFDQ-----AWELMSHVQRTH--PSLLTLKSMS 143
+L HP H +P P K L +A Y + A ++ + R P+LLT ++
Sbjct: 117 SLLHPNLHLSPPPS---KALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLL 173
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I L R S E FD M + +G+ + FNVL+ +C + ++++A + +
Sbjct: 174 IGLVRYPSSFSISSAREVFDDM---VKIGVS-LNVQTFNVLVNGYCLEGKLEDALGMLER 229
Query: 204 LLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++S F P+N T N +L + G ++ ++ +M G P+ VTYN + GYCK G
Sbjct: 230 MVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLG 289
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A ++ E M++ LP L T LI+G ++ + +L D M L+PD+ YN
Sbjct: 290 SLKEAFQIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYN 349
Query: 322 AMISSLIRCRDLNAAME---LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+I C +L ++E LM++ME + + VT++ L K E V + +
Sbjct: 350 TLIDG---CFELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKEL 406
Query: 379 IE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ F P T L+K + + L + + +G + L+ ++ LC +
Sbjct: 407 VDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERK 466
Query: 438 WEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
+EA R V E +Y ++ + + + LE D M K
Sbjct: 467 LDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKK 514
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/320 (22%), Positives = 123/320 (38%), Gaps = 38/320 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESG------------- 226
+N+L+ C M+E + + S + P+ T N L+ G E G
Sbjct: 313 YNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQME 372
Query: 227 -DVTAMEMFYHEMVLR----------------------GFRPSVVTYNIRIDGYCKKGCF 263
D H + L+ GF P +VTY+ I Y K G
Sbjct: 373 NDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDL 432
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+ + EM + + T+ T++ R + +A L + KR D Y +
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I R + A+E+ DEM++ +I T++++ GL E + +D + E
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T ++ +C RV+ + I F P + ++L+ GLC G E+A
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612
Query: 444 CSKQMLVRRRQVSEASYRML 463
L+ R+V +Y +
Sbjct: 613 FF-NTLIEEREVDTVTYNTM 631
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 49/313 (15%)
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
M RE+ K + N +L A C ++++ EA ++ R F + T L++GF
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGF 496
Query: 223 -KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+E A+EM + EM P+V T+N I G C G AM F+E+ LP
Sbjct: 497 FREEKVEKALEM-WDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD------------------------- 316
T ++I G + +A + ++E K + KPD
Sbjct: 556 DSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 317 ---------IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
YN MIS+ + + L A +L+ EMEEK + D TY++ LM+
Sbjct: 616 TLIEEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGK 675
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L +L + GKF R + +V+ N A
Sbjct: 676 LSETDELLKK-FSGKFGSMKR-----------DLQVETEKNPATSESKEELNTEAIAYSD 723
Query: 428 LVTGLCSRGRWEE 440
++ LCSRGR +E
Sbjct: 724 VIDELCSRGRLKE 736
>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
Length = 497
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 172/390 (44%), Gaps = 13/390 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYE 156
+ P + ++ L +M A +L+ ++ P+++ S ++ + K +
Sbjct: 78 YEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY---STIIDSLCKDKLIT 134
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
E +E M R I + + S +L FC EA S+F +++ R P+ T
Sbjct: 135 EAMEFLSEMVNRGISPNVVTYSS-----ILHGFCNLGRSNEATSLFKQMVERNVMPDTVT 189
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NIL+ G + G + + + M+ +G P+V TYN +DGYC + +A +LF M
Sbjct: 190 FNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMV 249
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
R C PS+++ LI G I +A+ L EM + L PD Y+ ++ +
Sbjct: 250 RKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQ 309
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A +L++EM + D +TY + GL K L+ +L M E K P +L+
Sbjct: 310 DAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILI 369
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+ C +++ L+ L +G P ++++GL G EA E + M V
Sbjct: 370 QGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCL 429
Query: 455 VSEASYR-MLQRYLVQANANEKLEDLDRMI 483
+ +Y ++Q +L + + ++ M+
Sbjct: 430 PNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/293 (26%), Positives = 131/293 (44%), Gaps = 5/293 (1%)
Query: 181 FNVLLQAFC--TQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+L+ FC A SV + PN+ T + LL G + + E
Sbjct: 13 LTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDE 72
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G+ P V+TY+ I+G CK G A++L ++ME C P++ +T+I +
Sbjct: 73 MVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKL 132
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I +A + EM R + P++ Y++++ N A L +M E+ + D VT++
Sbjct: 133 ITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNI 192
Query: 358 MFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K LE C +++ MIE P T LM +C ++D L+ ++ +
Sbjct: 193 LVDGLSKEGMILEAQC-VFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRK 251
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G P + ++L+ G C GR +EA +M + +Y L + Q
Sbjct: 252 GCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 173/392 (44%), Gaps = 16/392 (4%)
Query: 90 FKFTLQ--HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLS 147
FK LQ H F+ + I+ ++ FD+ ++ P ++T S +++
Sbjct: 39 FKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKM-----GYEPDVITY---STIIN 90
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+ K S ++ +ME + G + ++ ++ + C K + EA ++++R
Sbjct: 91 GLCKMGSTTMAIQLLKKMEEK---GCKP-NVVVYSTIIDSLCKDKLITEAMEFLSEMVNR 146
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+PN T + +L GF G + +MV R P VT+NI +DG K+G +A
Sbjct: 147 GISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEA 206
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+FE M P++ T L+ G + +A++LF+ M ++ P + +YN +I
Sbjct: 207 QCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKG 266
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ ++ A L+ EM K + D VTY T+ G + + KL + M +P
Sbjct: 267 HCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPD 326
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +++ C +D L + + P+ +L+ G+C+ G+ E A E
Sbjct: 327 LMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFS 386
Query: 447 QMLVRRRQVSEASYRMLQRYLVQAN-ANEKLE 477
+ V+ Q +Y ++ L++ +NE E
Sbjct: 387 NLFVKGIQPDVVTYTVMISGLLKGGLSNEACE 418
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 102/214 (47%), Gaps = 1/214 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++ C + EA+ + ++ + P+ T + L+ GF + G + EM
Sbjct: 260 YNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMR 319
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++TY+I +DG CK+G +A L + M+ P++ T LI G +
Sbjct: 320 SYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLE 379
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+LF + + ++PD+ Y MIS L++ N A EL +M ++ TY+ +
Sbjct: 380 AARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVII 439
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
G +++ +L + M+ F + T ML
Sbjct: 440 QGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 112/250 (44%), Gaps = 3/250 (1%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGC--FGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M L RP V T I I+ +C F A + M ++ P+ T +TL++G
Sbjct: 1 MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
I A +LFDEM K +PD+ Y+ +I+ L + A++L+ +MEEK + V Y
Sbjct: 61 AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ L K + + M+ P T ++ FC R + +L+ +++
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE 474
R P ++LV GL G EA + M+ + + + +Y ++ Y Q+ +E
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240
Query: 475 KLEDLDRMIK 484
+ + M++
Sbjct: 241 AQKLFNIMVR 250
>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
Length = 614
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 104/423 (24%), Positives = 178/423 (42%), Gaps = 24/423 (5%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLK 140
+ AL F+ +Q + L L + + DQA ++ H R H P+++T
Sbjct: 61 IDALRCFR-AMQGSGIVADTVIYTALLSGLWKEKRLDQALAIL-HEMRDHGCEPNVVTYN 118
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S+ L + ++ +E E +E + +N LL +++ A ++
Sbjct: 119 SLIDGLCKNNEPDRAQELFEHMKSVECSPSM-------VTYNTLLDGLFRTGKLERAMAL 171
Query: 201 FVKLLSR--------FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
F ++L R +PN T ++L+ G ++ V+ M RG P V+TY I
Sbjct: 172 FQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTI 231
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+DG CK+ A + EM C+P+L T +L+HG R + A L +M R
Sbjct: 232 LVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRG 291
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
P++ Y +I L + + A ++ +M +K D + Y+ + GL K+ ++
Sbjct: 292 CTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESI 351
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L R + G P T ++ C + R+D L Y+ RG P L+ GL
Sbjct: 352 ALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGL 411
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKNLQAVLP 491
C G+ +EAF+ + M +Y L L +A +E L RM++ P
Sbjct: 412 CKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR---MGTP 468
Query: 492 PPT 494
P T
Sbjct: 469 PST 471
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 138/334 (41%), Gaps = 43/334 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMF---- 234
+ LL+ FC E+ +A+ F ++ S+ PN +IL+ G K + A+ F
Sbjct: 12 YAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRCFRAMQ 71
Query: 235 ------------------------------YHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
HEM G P+VVTYN IDG CK
Sbjct: 72 GSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPD 131
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN-------LKPDI 317
A LFE M+ V C PS+ T TL+ G + +A LF EM R P++
Sbjct: 132 RAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNV 191
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y+ +I L + ++ A+EL++ M+ + D +TY + GL K S + ++
Sbjct: 192 ITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLRE 251
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M++ VP T L+ C RV L L + RG P+ L+ GLC GR
Sbjct: 252 MLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGR 311
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++A M+ + Y ML L +A+
Sbjct: 312 VKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 345
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 109/247 (44%), Gaps = 7/247 (2%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T LL GF G++ + + EM + P+V +I IDG CK DA+R
Sbjct: 7 PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F M+ + T L+ G + + QA + EM +P++ YN++I L +
Sbjct: 67 FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-------EGK 382
+ + A EL + M+ VTY+T+ GL ++ LE L+ M+ + +
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDR 186
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T +L+ C RV + L + RG P +LV GLC + A+
Sbjct: 187 CSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAW 246
Query: 443 ECSKQML 449
E ++ML
Sbjct: 247 EVLREML 253
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 146/358 (40%), Gaps = 17/358 (4%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+PD T+ + L + AWE++ + P+L+T S+ L R +
Sbjct: 223 SPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALA 282
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
+ D R + +G+ L+ C +K+A ++ ++ + P+ N
Sbjct: 283 LMR--DMTCRGCTPNVVTYGT-----LIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYN 335
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L+ G ++ V V G +P VVTY+ I G C+ +A RL ++
Sbjct: 336 MLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + +TLI G + +A L++ M D+ Y+ +I L + ++ A
Sbjct: 396 GCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEA 455
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L+ M +TY+++ GL + L+ +L + M P T +L+
Sbjct: 456 HLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHG 515
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDL-----LVTGLCSRGRWEEAFECSKQML 449
C RVD + L R G ALD L+ GLC GR EA + ++M+
Sbjct: 516 MCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQEMI 573
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 160/401 (39%), Gaps = 18/401 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEE 157
+P + + L + QA EL+ ++ P ++T + L + SK + E
Sbjct: 188 SPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWE 247
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
L RE+ +N LL C + + +A ++ + R PN T
Sbjct: 248 VL-------REMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYG 300
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + G V +M+ +G P ++ YN+ I+G CK +++ L
Sbjct: 301 TLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSG 360
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T +++I+G + +A +L + R PD+ Y+ +I L + ++ A
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L + M D VTY T+ GL K+ ++ L RM+ P T T L+K
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR----- 451
C +D + L + P ++L+ G+C R + A +Q R
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540
Query: 452 RRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKNLQAVLP 491
+ +Y L L +A E L+ MI N V+P
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDN--GVIP 579
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 72/175 (41%)
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T L+ G I QA++ FDEM +NL P++ + +I L + + A+
Sbjct: 5 CQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDAL 64
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
M+ I D V Y + GL K L+ + M + P T L+
Sbjct: 65 RCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGL 124
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
C N D L+ ++ P + L+ GL G+ E A ++ML RR
Sbjct: 125 CKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRR 179
>gi|255660826|gb|ACU25582.1| pentatricopeptide repeat-containing protein [Phyla dulcis]
Length = 418
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 152/320 (47%), Gaps = 19/320 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D +K L L +++YF+ W + + +P+ +L +I
Sbjct: 85 AVECYRLTREHKFWVPF-DTCKKMLEHLVKLKYFNLVWAFYEEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
++ R K E R+ + +F I K+G +N L+ + ++ E +
Sbjct: 142 LMHRFCK--------EGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLNEGFKL 193
Query: 201 FVKL-LSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF-EEMLVKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + LP L T TLI+G ++QA L DEM + LKPD
Sbjct: 253 KNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEMSMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFC 398
+ P T T M++ FC
Sbjct: 373 LSFGLKPDTGTYTMIINEFC 392
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 119/248 (47%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L M ++PD+ Y+ +I+ L + ++ A EL +EM K + + V
Sbjct: 183 RLGDLNEGFKLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFEEMLVKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C ++ +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNTLIYGLCKKGALNQAHDLMDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q +
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDR 481
E + R
Sbjct: 363 VDAEKMMR 370
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/255 (20%), Positives = 99/255 (38%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ ++ ++ R+ ++ ++L S H P + T S++++ + K ++
Sbjct: 169 PSVVSYNTLMNGYIRLGDLNEGFKLKSAMHASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E F+ M + G+ G F L+ C + A V+ ++LS+ P+ T N
Sbjct: 226 NELFEEM---LVKGLVPNGVT-FTTLIDGHCKNGRVDLAMEVYKQMLSQSLLPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G + G + EM ++G +P +TY N
Sbjct: 282 LIYGLCKKGALNQAHDLMDEMSMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQEN 341
Query: 252 IR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR I G C++G DA ++ EM P T T +I+ ++ +
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLLKEMQRDGHAPSV 416
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 33/67 (49%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G E EM+ G +P TY + I+ +CKKG +L +EM+R
Sbjct: 352 LISGLCQEGRSVDAEKMMREMLSFGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDG 411
Query: 278 CLPSLQT 284
PS+ T
Sbjct: 412 HAPSVVT 418
>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
chloroplastic-like [Glycine max]
Length = 556
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/307 (25%), Positives = 149/307 (48%), Gaps = 2/307 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ + C K + EA +++ ++ ++ PN T L+ GF G + +EM
Sbjct: 212 YNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMK 271
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P V T++I ID K+G A + M + P + T +L+ G LV +
Sbjct: 272 LKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVK 331
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ +F+ M + + P + +Y MI L + + ++ A+ L +EM+ K + + +T++++
Sbjct: 332 HAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLI 391
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + V L D+M + + T L+ C N +D + L+ +I +
Sbjct: 392 DGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQ 451
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLED 478
P + +L+ GLC GR + A E + +L++ + +Y ++ +A +E L
Sbjct: 452 PDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALAL 511
Query: 479 LDRMIKN 485
L +M N
Sbjct: 512 LSKMEDN 518
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++L+ A + +MK A+ V ++ + P+ T N L+ G+ +V + ++ M
Sbjct: 282 FSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMA 341
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V +Y I IDG CK +A+ LFEEM+ +P+ T +LI G I
Sbjct: 342 QSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIA 401
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
L D+M R+ D+ Y+++I +L + L+ A+ L +M + I D TY +
Sbjct: 402 YVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILI 461
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L+ +++ ++ + RT +++ FC D L L + D G
Sbjct: 462 DGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCI 521
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ D+++ L + ++A + ++M+ R
Sbjct: 522 PNAITFDIIICALFEKDENDKAEKLLREMIAR 553
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 133/281 (47%), Gaps = 1/281 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ C + E+K+A +++ F + + L+ G + G+ A + R
Sbjct: 145 LIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERS 204
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+P VV YNI ID CK G+A L+ EM P++ T TTLI+G ++ + +A
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L +EM +N+ PD+ ++ +I +L + + AA ++ M + + D VTY+++ G
Sbjct: 265 ALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGY 324
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ ++ +++ M + P ++ +++ C VD ++L+ + + P+
Sbjct: 325 FLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNT 384
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ GLC GR ++ +M R + +Y L
Sbjct: 385 ITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSL 425
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 43/215 (20%), Positives = 81/215 (37%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
++ M+L P +N + K F A+ L + ++ L T+ LI+
Sbjct: 56 LFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFC 115
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ I + + + KR PD+ +I L ++ A++ D++ D +
Sbjct: 116 HLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRI 175
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+Y T+ GL K + +L + E P +++ C N V NL+ +
Sbjct: 176 SYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEM 235
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ P+ L+ G C G EA +M
Sbjct: 236 NAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEM 270
>gi|225447562|ref|XP_002269867.1| PREDICTED: pentatricopeptide repeat-containing protein At4g26680,
mitochondrial-like [Vitis vinifera]
Length = 616
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/380 (24%), Positives = 160/380 (42%), Gaps = 14/380 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT----HPSLL---T 138
+ EFF + T + + LHIL + F A ++ + + HPS L
Sbjct: 174 SFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAI 233
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMER--EIFVGIRKFG----SEEFNVLLQAFCTQK 192
L S I S F S +T ++ ++F ++ +G E N + A + +
Sbjct: 234 LYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQ 293
Query: 193 EMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
A + + ++ R +PN T+N+++ F + G + + M GF P++ +YN
Sbjct: 294 RGDIALTFYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYN 353
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I GYC KG M+L ME+ P T TLI+G +H+A ++F EM
Sbjct: 354 TLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKAN 413
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ P+ YN +I+ + + L DEM I D +TY+ + GL +
Sbjct: 414 DVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKA 473
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L + VP + T L+ CV + L+ +I G P+ H +L++
Sbjct: 474 AYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLIST 533
Query: 432 LCSRGRWEEAFECSKQMLVR 451
C ++ A E ++M R
Sbjct: 534 FCKNEDFDGAVEVVREMSER 553
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+++ AFC ++++A VF ++ + F+P + N L+ G+ G + + M
Sbjct: 317 LNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILME 376
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G RP VT+N I+G+C+ G +A ++F EM+ +P+ T TLI+G V N
Sbjct: 377 KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSE 436
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L DEM + +K DI YNA+I L A L+ E++ + + ++ T+ +
Sbjct: 437 MGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 496
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G E +LY MI P T ML+ FC N D + + + +R
Sbjct: 497 TGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIA 556
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P L L GL G+ E A + K+M
Sbjct: 557 PDSDTLSELCRGLWLSGKEELALKLCKEM 585
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 86/359 (23%), Positives = 156/359 (43%), Gaps = 19/359 (5%)
Query: 122 AWELMSHVQRTHPSLLTLKSMSIML---SRISKFQSYEETLEAF---------DRMEREI 169
++E + V+ +P+ TL++ SI+L ++ KF+S E L+ ++ I
Sbjct: 174 SFEFFNWVKAQNPNCQTLETYSIILHILTKNHKFKSAESVLKGILGSGSIDHPSKLFEAI 233
Query: 170 FVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK--E 224
R S F+ L + + K+++ A VF ++ F P ++ N + +
Sbjct: 234 LYSYRICDSSPCVFDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQ 293
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
GD+ FY EM P+V T N+ + +CK G A+ +F+ ME + P++ +
Sbjct: 294 RGDIALT--FYREMQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKRMETMGFSPTITS 351
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
TLI G ++ +L M K ++PD +N +I+ R L+ A ++ EM+
Sbjct: 352 YNTLIAGYCNKGLLNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMK 411
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+ + +TY+T+ G + E +L+D M+ T L+ C+ R
Sbjct: 412 ANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTK 471
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L L P+ L+TG C R E AF+ K M+ + +++ML
Sbjct: 472 KAAYLVKELDRENLVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKML 530
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 105/215 (48%), Gaps = 5/215 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC ++ EA +F ++ + PN T N L+ G+ + G+ + EM+
Sbjct: 387 FNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 446
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + ++TYN I G C +G A L +E++R +P+ T + LI G + +N
Sbjct: 447 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSE 506
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QL+ M + P+ + +IS+ + D + A+E++ EM E+ I D+ T +
Sbjct: 507 RAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELC 566
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVP----KTRTV 390
GL S E KL M +P K++T+
Sbjct: 567 RGLWLSGKEELALKLCKEMEMKHLMPEGFDKSKTI 601
>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 550
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 151/319 (47%), Gaps = 8/319 (2%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R PS++ + LS I K + Y+ + +ME +GIR FN+++ FC
Sbjct: 80 RPFPSIVDFNRL---LSAIVKMKKYDVVISLGKKME---VLGIRN-DLYTFNIVINCFCC 132
Query: 191 QKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
++ A SV K+L + P+ T+ L+ GF V+ +MV G+RP +V
Sbjct: 133 CFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVA 192
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN ID CK DA+ F+E+ R P++ T T L++G + A +L +M
Sbjct: 193 YNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMI 252
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
KR + P++ Y+A++ + ++ + A E+ +EM I D VTY ++ GL ++
Sbjct: 253 KRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRID 312
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+++D M+ P + L+ FC RV+ G+ L+ + RG + + L+
Sbjct: 313 EANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLI 372
Query: 430 TGLCSRGRWEEAFECSKQM 448
G G ++A E QM
Sbjct: 373 QGFFQVGDVDKAQEFFSQM 391
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 132/298 (44%), Gaps = 5/298 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K + + L+ F + R+ GIR + L+ C +A + +
Sbjct: 196 IIDSLCKTRRVNDALDFFKEIGRK---GIRP-NVVTYTALVNGLCNSGRWNDAARLLRDM 251
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN T + LL F ++G V + + EMV P +VTY+ I+G C
Sbjct: 252 IKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRI 311
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F+ M C P + + TLI+G + + +LF +M +R L + YN +
Sbjct: 312 DEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTL 371
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + D++ A E +M+ + D TY+ + GL + LE +++ M + +
Sbjct: 372 IQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEM 431
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T +++ C +V+ L+ L +G P +++GLC++G E
Sbjct: 432 DLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEV 489
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/114 (23%), Positives = 52/114 (45%), Gaps = 5/114 (4%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLG 221
+E F + FG +N+LL C +++A +F + S + T ++ G
Sbjct: 385 QEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQG 444
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++G V + + L+G +P +VTY + G C KG + L+ +M++
Sbjct: 445 MCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQ 498
>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Cucumis sativus]
Length = 768
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/409 (23%), Positives = 173/409 (42%), Gaps = 8/409 (1%)
Query: 80 HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTL 139
++ + AL F + + P+F P+ +E+ L L + F+ ++ ++ +
Sbjct: 74 QTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEF-DR 132
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
I + KF+ Y+E + ME E + K + +NVLL ++K S
Sbjct: 133 GIFLIFVESYGKFELYDEVVGIVKVMEDEYRI---KPDTRFYNVLLNVLVDANKLKLVES 189
Query: 200 VFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ R ++ T NIL+ ++ V + EM G P T+ + GY
Sbjct: 190 AHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYI 249
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G A+R+ E+M C + T+ LI+G I QA E +PD
Sbjct: 250 EGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQF 309
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +++ L + AME++D M + D TY+++ GL K +E K+ D+M
Sbjct: 310 TYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQM 369
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ P T ++ C RVD + L +G P + L+ GLC
Sbjct: 370 VSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNH 429
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
+ A + ++M + + E +Y ML L ++ KLE+ ++K ++
Sbjct: 430 KSAMDLFEEMKGKGCRPDEFTYNMLIDSLC---SSRKLEEALNLLKEME 475
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 180/422 (42%), Gaps = 16/422 (3%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILAR 115
Q + P + V NVL F +AL F + + F P + ++ L +
Sbjct: 263 QMVEYGCPCTDVTV-NVLINGFCKQGRIDQALSFIQEAVSE-GFRPDQFTYNTLVNGLCK 320
Query: 116 MRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVG 172
+ + A E++ + P + T S+ +S + K EE ++ D+M R+
Sbjct: 321 IGHAKHAMEVVDAMLLGGLDPDIYTYNSL---ISGLCKLGEIEEAVKILDQMVSRDC--- 374
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK-ESGDVTA 230
+ +N ++ + C + + EA + L S+ P+ T N L+ G S +A
Sbjct: 375 --SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSA 432
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
M++F EM +G RP TYN+ ID C +A+ L +EME C ++ TLI
Sbjct: 433 MDLF-EEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLID 491
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + I +A ++FDEM + + D YN +I L + + + A +LMD+M + +
Sbjct: 492 GFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRP 551
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D TY+++ K+ ++ + M P T L+ C RV + L
Sbjct: 552 DKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLL 611
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ +G HA + ++ L R R EA ++ML + +Y+++ R L
Sbjct: 612 RSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNG 671
Query: 471 NA 472
Sbjct: 672 GG 673
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 99/220 (45%), Gaps = 2/220 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K ++EA +F ++ L + ++ T N L+ G +S V +M+
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G RP TYN + +CK G A + + M C P + T TLI G +
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + + + AYN +I +L + + AM L EM +K D +TY ++
Sbjct: 606 VASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVY 665
Query: 360 FGLMKSSGLEG-VCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
GL G G MIE +P+ + VML + C
Sbjct: 666 RGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/349 (23%), Positives = 149/349 (42%), Gaps = 31/349 (8%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+P + + L + D+A E+ + P + T S+ L S +S
Sbjct: 375 SPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKS--- 431
Query: 158 TLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKT 214
++ F+ M+ + G R +EF N+L+ + C+ ++++EA ++ ++ L+ A N
Sbjct: 432 AMDLFEEMKGK---GCR---PDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVI 485
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ GF ++ + E + EM L+G VTYN IDG CK DA +L ++M
Sbjct: 486 YNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMI 545
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P T +L+ +I +A + M PDI Y +IS L + +
Sbjct: 546 MEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQ 605
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ ++ K + Y+ + L K + +L+ M++ P T ++
Sbjct: 606 VASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVY 665
Query: 395 KFFC---------VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ C V+F V+ +I+RG P + +L GLC+
Sbjct: 666 RGLCNGGGPIGEAVDFTVE--------MIERGNIPEFSSFVMLAEGLCT 706
>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like [Vitis vinifera]
Length = 778
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ C + ++EA + ++ + + P+ + N L+ G E ++ EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P+ VT+NI + YCK+G DA +ME P T TLI+G N+
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + DEM ++N+K D N ++ +L R + L A +L+ ++ D V+Y T+
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ KL+D M E + +P T T ++ C + + ++ L++ G
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + ++ G C G E+AF+ +M+
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+EA + +KL PN T NI++ G+ F + M P VTYN +
Sbjct: 193 REAFNDAIKL--GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D CKKG GDA L +M+ LP+ T L++G + + +A + + M + NL
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ YN +I+ L + A +L DEME ++ D V+Y+T+ G ++ S + KL
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M E P T +++K++C ++D N + + GF P + L+ G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
G EAF +M + ++ + + R L + +KLE+ +++
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE---KKLEEAYKLL 476
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 150/343 (43%), Gaps = 39/343 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L C + + +AR + + + SR PN T NIL+ G+ + G + M
Sbjct: 246 YNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TYN+ I+G C +G +A +L +EME + LP + + TLI+G I
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365
Query: 300 QARQLFDEMPKRNLK-----------------------------------PDIGAYNAMI 324
+A +L +EM ++ +K PD YN +I
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKF 383
+ + ++ A MDEM K + D+VT +T+ L + LE KL + G F
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ + +++ +F + VD L LW + ++ P + ++ GLC G+ E+A
Sbjct: 486 IDEVSYGTLIVGYF-KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544
Query: 444 CSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
++L E +Y +L Y + + + + ++M++N
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 36/304 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ ++ EA + ++ + PN T NI++ + + G + +M
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER-------VACLPSLQTIT------ 286
GF P VTYN I+GYCK G G+A R +EM R V L+T+
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 287 ----------------------TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
TLI G N+ +A +L+DEM ++ + P YN +I
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L +C A+ ++E+ E + D TY+T+ G + +E + +++M+E F
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +L++ C+ ++ L L+ + +G + L+T LC GR ++AF
Sbjct: 591 PDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 445 SKQM 448
+M
Sbjct: 651 LSEM 654
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 137/331 (41%), Gaps = 37/331 (11%)
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
+ + EAF +E G++ + N++++ +C + +M +A + K+ S F+P+
Sbjct: 361 WSKISEAFKLLEEMSEKGVKP-NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCV 419
Query: 214 TMNILLLGFKESGDV-----TAMEMFYHEMVL---------------------------- 240
T N L+ G+ ++G++ T EM M +
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSA 479
Query: 241 --RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG+ V+Y I GY K G A++L++EM+ +PS T +I G
Sbjct: 480 RKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKT 539
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA +E+ + L PD YN ++ R D+ A + ++M E D T + +
Sbjct: 540 EQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNIL 599
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL LE KL++ + T T L+ C R+D NL + ++
Sbjct: 600 LRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKEL 659
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + + ++T L GR EA E +ML
Sbjct: 660 GPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 121/294 (41%), Gaps = 47/294 (15%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + +++ K + E D M R+ K S N +L+ C +K+++EA +
Sbjct: 420 TYNTLINGYCKAGNMGEAFRTMDEMGRKNM----KMDSVTLNTILRTLCREKKLEEAYKL 475
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
R + + + L++G+ + G+V + EM + PS VTYN I G C+
Sbjct: 476 LSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQ 535
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI-- 317
G A+ E+ LP T T++HG ++ +A Q ++M + + KPD+
Sbjct: 536 CGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFT 595
Query: 318 ---------------------------------GAYNAMISSLIRCRDLNAAMELMDEME 344
YN +I+SL + L+ A L+ EME
Sbjct: 596 CNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEME 655
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP-------KTRTVV 391
EK +G D+ TY+ + L S + + +M+E +P K TVV
Sbjct: 656 EKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVV 709
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 24/135 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + C + + +A ++ ++ + P++ T N ++ +SG + E F +M+
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Query: 240 LRGFRPS-----------------------VVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+G P V Y+ I C +G + DAMR+F E ++
Sbjct: 691 EKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQK 750
Query: 277 ACLPSLQTITTLIHG 291
T L+ G
Sbjct: 751 GITVDKSTYINLMDG 765
>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
Length = 578
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 99/432 (22%), Positives = 174/432 (40%), Gaps = 40/432 (9%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
L+ ++L A S L+A + F + HP P+ + L L + D A +
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179
Query: 127 SHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEE 180
+R P + T ++ L RI + R ++ I+ +G
Sbjct: 180 RSALRRRVSPDIYTFNTVISGLCRIGQL-----------RKAGDVAKDIKAWGLAPSVAT 228
Query: 181 FNVLLQAFCTQ-------------KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
+N L+ +C + KEM EA +P T +L+ G+ ++ +
Sbjct: 229 YNSLIDGYCKKGGAGNMYHVDMLLKEMVEAG---------ISPTAVTFGVLINGYCKNSN 279
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
A + EM +G SVVTYN I G C +G + ++L EEME + P+ T
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++ G + A D M +RN++PD+ Y +I R + AM + + M +K
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + TY+ + G +S L D M E T +L+ C V +
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L + + G P+ + ++ G C +G + A+E +M R++ + +Y + +Y
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519
Query: 468 VQANANEKLEDL 479
Q ++ DL
Sbjct: 520 CQIGKMDEANDL 531
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 129/270 (47%), Gaps = 9/270 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+N L+ C++ +++E VKL+ +PN T +L GF + G + +
Sbjct: 302 YNSLISGLCSEGKVEEG----VKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M R P VV Y I IDGY + G DAM + E M + P++ T LI G
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A L DEM ++ ++ D+ YN +I +L ++ A++L+DEM E + +++TY
Sbjct: 418 GDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTY 477
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G ++ ++ RM + + T + +K+FC ++D +L ++D
Sbjct: 478 NTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLD 537
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
+ P+G + + G+ +G + C+
Sbjct: 538 KCLVPNGITYETIKEGMMEKGYTPDIRGCT 567
>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 604
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 154/323 (47%), Gaps = 7/323 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ ++ K + + + F ME REI S F+ L+ ++ EA +F
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPD-----SIAFSALICGLSGSGKVVEADKLF 273
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++ + F P+ T L+ G+ + G++ +++MV G P+VVTY DG CK
Sbjct: 274 NEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKS 333
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A L EM R ++ T T+++G NI QA +L +EM + L PD Y
Sbjct: 334 GELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITY 393
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ + + ++ A EL+ EM ++ + VT++ + GL S LE +L M+E
Sbjct: 394 TTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLE 453
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T +MK +C+ + + ++ + +G P + ++L+ G C +E
Sbjct: 454 KGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKE 513
Query: 441 AFECSKQMLVRRRQVSEASYRML 463
A+ K+M+ +R ++ +SY L
Sbjct: 514 AWFLHKEMVEKRFNLTASSYNAL 536
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 149/355 (41%), Gaps = 39/355 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ +C E+++ + ++ L PN T + ++L +SG V E EM+
Sbjct: 148 YTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMM 207
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P V Y IDG+CK G A +LF EME +P + LI G +
Sbjct: 208 KRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVV 267
Query: 300 QARQLFDEMPKRNLKPD-----------------------------IG------AYNAMI 324
+A +LF+EM K+ +PD IG Y A+
Sbjct: 268 EADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALA 327
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + +L+ A EL+ EM K + + TY+T+ GL K+ + KL + M E
Sbjct: 328 DGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLH 387
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T LM + + L ++DRG P ++L+ GLC G+ E+
Sbjct: 388 PDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERL 447
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
K ML + + A+Y ++++Y ++ N E M Q V+P +
Sbjct: 448 LKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCA--QGVVPDSNTYNI 500
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 126/274 (45%), Gaps = 1/274 (0%)
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+ +E +N+L+ + +++EA + +++ P+ + ++ G+ G++ +
Sbjct: 108 WNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQL 167
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
EM L+G +P++ TY+ I CK G + ++ EM + P TTLI G
Sbjct: 168 VKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCK 227
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ N A +LF EM R + PD A++A+I L + A +L +EM +K D VT
Sbjct: 228 LGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVT 287
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + G K ++ L+++M++ P T L C + +D L +
Sbjct: 288 YTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMC 347
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+G + + +V GLC G +A + ++M
Sbjct: 348 RKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEM 381
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/369 (24%), Positives = 148/369 (40%), Gaps = 42/369 (11%)
Query: 165 MEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLL----------------- 205
+ER I+ + +GS+ F+V Q + EAR F KLL
Sbjct: 25 VERLIYT-YKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTC 83
Query: 206 ---------------SRF-----APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
S F N ++ NIL+ G + M +G P
Sbjct: 84 LSSKRDMLGMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIP 143
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
VV+Y IDGYC G ++L +EM+ P+L T +++I + + ++
Sbjct: 144 DVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL 203
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
EM KR + PD Y +I + + AA +L EME + I D++ + + GL S
Sbjct: 204 REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGS 263
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ KL++ MI+ F P T L+ +C + L ++ G P+
Sbjct: 264 GKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
L GLC G + A E +M + Q++ ++Y + L + A L+ + M +
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCK--AGNILQAVKLMEEM 381
Query: 486 LQAVLPPPT 494
+A L P T
Sbjct: 382 KEAGLHPDT 390
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 155/385 (40%), Gaps = 40/385 (10%)
Query: 20 LALLFSTTTQSSEIERITR-IINDHPFPDQPLHPTLLQHLPQ--TTPLSSTLVENVLGR- 75
+ LL + + E E++ R ++ FPD ++ TL+ + T + L + R
Sbjct: 186 IILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEARE 245
Query: 76 ----------LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
L S K +E K + PD T I + +
Sbjct: 246 IVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAF 305
Query: 126 MSHVQRTH----PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV--------GI 173
H Q P+++T +++ L + + + E L R ++ + G+
Sbjct: 306 FLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGL 365
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
K G+ +LQA +EMKEA P+ T L+ + ++G++
Sbjct: 366 CKAGN-----ILQAVKLMEEMKEAG---------LHPDTITYTTLMDAYYKTGEMVKARE 411
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
EM+ RG +P+VVT+N+ ++G C G D RL + M +P+ T +++
Sbjct: 412 LLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQYC 471
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ N+ + +++ M + + PD YN +I + R++ A L EM EKR
Sbjct: 472 IRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKRFNLTAS 531
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRM 378
+Y+ + G K L +L++ M
Sbjct: 532 SYNALIKGFFKRKKLLEARQLFEEM 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 93/214 (43%), Gaps = 9/214 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+ EM +AR + ++L R P T N+L+ G SG + E M+
Sbjct: 393 YTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWML 452
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC----LPSLQTITTLIHGAGLV 295
+G P+ TYN + YC + + MR+ E+ R C +P T LI G
Sbjct: 453 EKGIMPNAATYNSIMKQYCIR----NNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKA 508
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
RN+ +A L EM ++ +YNA+I + + L A +L +EM + + Y
Sbjct: 509 RNMKEAWFLHKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIY 568
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ + +E +L D IE + K R
Sbjct: 569 NLFVDMNYEEGNMETTLELCDEAIEKCLLDKARN 602
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/218 (21%), Positives = 91/218 (41%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L C E+ A + ++ + N T N ++ G ++G++ EM
Sbjct: 323 YTALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMK 382
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +TY +D Y K G A L EM P++ T L++G + +
Sbjct: 383 EAGLHPDTITYTTLMDAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLE 442
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L M ++ + P+ YN+++ ++ + E+ M + + D+ TY+ +
Sbjct: 443 DGERLLKWMLEKGIMPNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILI 502
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
G K+ ++ L+ M+E +F + L+K F
Sbjct: 503 KGHCKARNMKEAWFLHKEMVEKRFNLTASSYNALIKGF 540
>gi|410109945|gb|AFV61052.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rubella]
Length = 394
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 150/320 (46%), Gaps = 19/320 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 73 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILESGYPA--SLYFFNI 129
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G +N L+ + ++ E R
Sbjct: 130 LMHRFCK--------ERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 182 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 240
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A+ ++++M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 241 KNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 300
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y A+I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 301 TYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 360
Query: 379 IEGKFVPKTRTVVMLMKFFC 398
+ P RT M++ FC
Sbjct: 361 LSVGLKPDARTYTMIINEFC 380
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
SL L+H R+I A+ +FD + K L+P + +YN +++ IR DL+ L
Sbjct: 122 ASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
M + D TY + GL K S ++ +L+D M+ VP T L+ C
Sbjct: 182 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVTFTTLIDGHCK 241
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
N RVDL L ++ ++ + P + L+ GLC +G ++A + +M ++ + + +
Sbjct: 242 NGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKIT 301
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIK 484
Y ++ + + + E RMI+
Sbjct: 302 YTALIDGCCKEGDLDTAFEHRKRMIQ 327
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+ A +F+ + + PS+ + TL++G
Sbjct: 111 FYKEILESGYPASLYFFNILMHRFCKERDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 171 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 230
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 231 TFTTLIDGHCKNGRVDLALEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 290
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q +
Sbjct: 291 SMKGLKPDKITYTALIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 350
Query: 474 EKLEDLDRMIKNLQAV-LPPPTR 495
D ++M++ + +V L P R
Sbjct: 351 ---VDAEKMLREMLSVGLKPDAR 370
>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
Length = 778
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 131/270 (48%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ C + ++EA + ++ + + P+ + N L+ G E ++ EM
Sbjct: 316 YNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMS 375
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P+ VT+NI + YCK+G DA +ME P T TLI+G N+
Sbjct: 376 EKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMG 435
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + DEM ++N+K D N ++ +L R + L A +L+ ++ D V+Y T+
Sbjct: 436 EAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLI 495
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ KL+D M E + +P T T ++ C + + ++ L++ G
Sbjct: 496 VGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLL 555
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + ++ G C G E+AF+ +M+
Sbjct: 556 PDETTYNTILHGYCREGDVEKAFQFHNKMV 585
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 5/289 (1%)
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
+EA + +KL PN T NI++ G+ F + M P VTYN +
Sbjct: 193 REAFNDAIKL--GIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTIL 250
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D CKKG GDA L +M+ LP+ T L++G + + +A + + M + NL
Sbjct: 251 DALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ YN +I+ L + A +L DEME ++ D V+Y+T+ G ++ S + KL
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M E P T +++K++C ++D N + + GF P + L+ G C
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCK 430
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
G EAF +M + ++ + + R L + +KLE+ +++
Sbjct: 431 AGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCRE---KKLEEAYKLL 476
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 151/343 (44%), Gaps = 39/343 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L A C + + +AR + + + SR PN T NIL+ G+ + G + M
Sbjct: 246 YNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMT 305
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TYN+ I+G C +G +A +L +EME + LP + + TLI+G I
Sbjct: 306 QNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKIS 365
Query: 300 QARQLFDEMPKRNLK-----------------------------------PDIGAYNAMI 324
+A +L +EM ++ +K PD YN +I
Sbjct: 366 EAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLI 425
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKF 383
+ + ++ A MDEM K + D+VT +T+ L + LE KL + G F
Sbjct: 426 NGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYF 485
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ + +++ +F + VD L LW + ++ P + ++ GLC G+ E+A
Sbjct: 486 IDEVSYGTLIVGYF-KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544
Query: 444 CSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
++L E +Y +L Y + + + + ++M++N
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVEN 587
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 133/304 (43%), Gaps = 36/304 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ ++ EA + ++ + PN T NI++ + + G + +M
Sbjct: 351 YNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER-------VACLPSLQTIT------ 286
GF P VTYN I+GYCK G G+A R +EM R V L+T+
Sbjct: 411 ESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470
Query: 287 ----------------------TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
TLI G N+ +A +L+DEM ++ + P YN +I
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L +C A+ ++E+ E + D TY+T+ G + +E + +++M+E F
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +L++ C+ ++ L L+ + +G + L+T LC GR ++AF
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650
Query: 445 SKQM 448
+M
Sbjct: 651 LSEM 654
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 135/326 (41%), Gaps = 37/326 (11%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNIL 218
EAF +E G++ + N++++ +C + +M +A + K+ S F+P+ T N L
Sbjct: 366 EAFKLLEEMSEKGVKP-NAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424
Query: 219 LLGFKESGDV-----TAMEMFYHEMVL------------------------------RGF 243
+ G+ ++G++ T EM M + RG+
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
V+Y I GY K G A++L++EM+ +PS T +I G QA
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAIS 544
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+E+ + L PD YN ++ R D+ A + ++M E D T + + GL
Sbjct: 545 KLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLC 604
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
LE KL++ + T T L+ C R+D NL + ++ P +
Sbjct: 605 MEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHY 664
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQML 449
+ ++T L GR EA E +ML
Sbjct: 665 TYNAIITALTDSGRIREAEEFMSKML 690
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 110/265 (41%), Gaps = 40/265 (15%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E D M R+ K S N +L+ C +K+++EA + R + + +
Sbjct: 436 EAFRTMDEMGRKNM----KMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSY 491
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L++G+ + G+V + EM + PS VTYN I G C+ G A+ E+
Sbjct: 492 GTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLE 551
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI------------------ 317
LP T T++HG ++ +A Q ++M + + KPD+
Sbjct: 552 SGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEK 611
Query: 318 -----------------GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
YN +I+SL + L+ A L+ EMEEK +G D+ TY+ +
Sbjct: 612 ALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIIT 671
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVP 385
L S + + +M+E +P
Sbjct: 672 ALTDSGRIREAEEFMSKMLEKGXLP 696
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/135 (20%), Positives = 55/135 (40%), Gaps = 24/135 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + C + + +A ++ ++ + P++ T N ++ +SG + E F +M+
Sbjct: 631 YNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKML 690
Query: 240 LRGFRPS-----------------------VVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+G P V Y+ I C +G + DAMR+F E ++
Sbjct: 691 EKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQK 750
Query: 277 ACLPSLQTITTLIHG 291
T L+ G
Sbjct: 751 GITVDKSTYINLMDG 765
>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
Length = 602
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 5/308 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL+A C + ++A + + + PNN T N+L+ G GDV +
Sbjct: 205 YNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLP 264
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +PS V YN + G C +GDA L EM R C P+ T +I+ +
Sbjct: 265 SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQ 324
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA QL ++M K +I YNA+I+ L R+++ AM L+ +M+ D VTY+T+
Sbjct: 325 QAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLL 384
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL ++ +L D M + +P T L+ F C + + ++ + D+G
Sbjct: 385 KGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT 444
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +++GL + ++A E +M + + Y++L L N ++ +E+
Sbjct: 445 PNSITYSTIISGLAKATKLDQALELFNEM-GHKGFNPDKIYQLLAECL---NDDDTIEEA 500
Query: 480 DRMIKNLQ 487
+ ++ LQ
Sbjct: 501 IQTVRKLQ 508
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/350 (24%), Positives = 150/350 (42%), Gaps = 20/350 (5%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A EL+ ++ +H + + + +L + + + + E M RE
Sbjct: 253 VDDALELLRNLP-SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENC----PPNE 307
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI-----LLLGFKESGDVTAMEM 233
FNV++ + C + +++A ++LL + + + T NI ++ G E +V
Sbjct: 308 ATFNVVIYSLCRKGLLQQA----IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMG 363
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+M G +P +VTYN + G C + DA L + M + CLP T TLI
Sbjct: 364 LLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLC 423
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ A ++F +MP + P+ Y+ +IS L + L+ A+EL +EM K D +
Sbjct: 424 QKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI 483
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y + L +E + ++ + P T ++ C N + + +++ Y+
Sbjct: 484 -YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYM 542
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSKQMLVRRRQVSEA 458
+ G P +L+ GL G EA E CS+ +LV SEA
Sbjct: 543 VSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEA 592
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 155/365 (42%), Gaps = 9/365 (2%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
PD + L + R + QA EL+ + R + ++++ + ++ L
Sbjct: 199 APDVVTYNILLEATCKGRGYRQAMELID-LMRAEGCTPNNVTYNVLMDGMCGEGDVDDAL 257
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNIL 218
E R + K + +N +L+ C+ + +A + ++L PN T N++
Sbjct: 258 ELL----RNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVV 313
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + +M G ++VTYN I+G C++ AM L +M+ C
Sbjct: 314 IYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGC 373
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P + T TL+ G A +L D M + PD +N +I L + + A+E
Sbjct: 374 KPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIE 433
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ +M +K +++TY T+ GL K++ L+ +L++ M F P + +L +
Sbjct: 434 VFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLN 492
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+ ++ + L D G PH + ++ GLC G+ E A + M+ +
Sbjct: 493 DDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDL 552
Query: 459 SYRML 463
+Y +L
Sbjct: 553 TYVIL 557
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 115/289 (39%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ L +C + +AR V + PN T N L+ E G V +M+
Sbjct: 138 YGALTDGYCRAGRLGDARRVVGGM--PVQPNAYTYNPLIHTLCERGQVRDALSVLDDMLC 195
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P VVTYNI ++ CK + AM L + M C P+ T L+ G ++
Sbjct: 196 RGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDD 255
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L +P KP YN ++ L A EL+ EM + + T++ + +
Sbjct: 256 ALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIY 315
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + L+ +L ++M + T ++ C VD + L + G P
Sbjct: 316 SLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKP 375
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ L+ GLCS +W +A E M ++ L +L Q
Sbjct: 376 DIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 424
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 3/207 (1%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +VV Y DGYC+ G GDA R+ M P+ T LIH + A
Sbjct: 130 GPAATVVAYGALTDGYCRAGRLGDARRVVGGM---PVQPNAYTYNPLIHTLCERGQVRDA 186
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ D+M R PD+ YN ++ + + R AMEL+D M + +NVTY+ + G
Sbjct: 187 LSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDG 246
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ ++ +L + P T ++K C R L ++ P+
Sbjct: 247 MCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPN 306
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQM 448
++++ LC +G ++A + ++M
Sbjct: 307 EATFNVVIYSLCRKGLLQQAIQLLEKM 333
>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Cucumis sativus]
Length = 628
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 95/380 (25%), Positives = 164/380 (43%), Gaps = 9/380 (2%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
F+ + M D+A+E + + L T+++ + +LS K E + M
Sbjct: 154 FDYLIKSCCDMNRADEAFECF-YTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEM 212
Query: 166 EREIFVGIR-KFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFK 223
R +R K FN+++ C + ++K+A+ + S PN T N ++ G+
Sbjct: 213 FR-----LRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYC 267
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
SG V A + M + P TY I G CK+G +A ++FEEM + PS
Sbjct: 268 SSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAV 327
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
TLI G N+ A DEM K+ + P + YN++I +L + + A ++ E+
Sbjct: 328 IYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEI 387
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+EK I D +TY+ + G + + + L+D M+ P +T L+ R+
Sbjct: 388 QEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRM 447
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-M 462
+L+ + G P + L+ G CS + AFE K M + E ++ +
Sbjct: 448 KEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTI 507
Query: 463 LQRYLVQANANEKLEDLDRM 482
+Q + + E E D M
Sbjct: 508 MQGHCREGKVEEARELFDEM 527
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 82/343 (23%), Positives = 150/343 (43%), Gaps = 8/343 (2%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
Q+ P T S+ +S + K EE + F+ M ++ G+R + +N L+ FC
Sbjct: 285 QKIEPDSFTYGSL---ISGMCKQGRLEEASKIFEEMVQK---GLRP-SAVIYNTLIDGFC 337
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ + A + ++L + +P T N L+ E E+ +G P +
Sbjct: 338 NKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAI 397
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYNI I+GYC+ A L +EM P+ +T T+L+H + +A LF ++
Sbjct: 398 TYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKI 457
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ PD+ +NA+I ++ A EL+ +M+ ++ D VT++T+ G + +
Sbjct: 458 TSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKV 517
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
E +L+D M P + L+ + + + ++D GF P + L
Sbjct: 518 EEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNAL 577
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
V GLC + A E K+M+ + + +Y L + + N
Sbjct: 578 VQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVN 620
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 107/459 (23%), Positives = 187/459 (40%), Gaps = 24/459 (5%)
Query: 48 QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF------------TLQ 95
+P LQ P +P+S+T + + L F S F K TL
Sbjct: 15 KPFSSISLQKTPLESPVSTTNLASPLTPHFLEQSARSSQWHFIKQVESSLTPSLISQTLL 74
Query: 96 HPHFTP--TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
+ H +P D H L+ R A +++ + P+L LK + S +
Sbjct: 75 NLHESPQVVLDFLNHFHHKLSDARTLCLAIVIVARLPSPKPALHLLKQALGGGTTNSIRE 134
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
+E + DR+ G + S F+ L+++ C EA F + + P
Sbjct: 135 IFEFLAASRDRL------GFK--SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTI 186
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T N LL F + A + Y EM + SV T+NI I+ CK+G A
Sbjct: 187 ETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGH 246
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
ME P++ T T++HG + A + M ++ ++PD Y ++IS + +
Sbjct: 247 METSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGR 306
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L A ++ +EM +K + V Y+T+ G L+ D M++ P T
Sbjct: 307 LEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNS 366
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ + R D + + ++G P ++L+ G C ++AF +ML
Sbjct: 367 LIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASG 426
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+ ++ +Y L L + N ++ +DL + I + + VLP
Sbjct: 427 IKPTKKTYTSLLHVLSKKNRMKEADDLFKKITS-EGVLP 464
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/302 (24%), Positives = 133/302 (44%), Gaps = 11/302 (3%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S ++ N L F N L +K + +PT + +H L + D+A +
Sbjct: 325 SAVIYNTLIDGFCNKGN-LDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECM 383
Query: 126 MSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ +Q P +T +I+++ + + ++ D M + GI+ + +
Sbjct: 384 IKEIQEKGISPDAITY---NILINGYCRCANAKKAFLLHDEM---LASGIKP-TKKTYTS 436
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL + MKEA +F K+ S P+ N L+ G + +V +M
Sbjct: 437 LLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMK 496
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VT+N + G+C++G +A LF+EM+R P + TLI G +I A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAF 556
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
++ +EM P + YNA++ L + ++ + A EL+ EM K + D+ TY T+ G+
Sbjct: 557 RVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGI 616
Query: 363 MK 364
K
Sbjct: 617 AK 618
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 90/200 (45%), Gaps = 14/200 (7%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT + LH+L++ +A +L + + P ++ ++ S + E
Sbjct: 429 PTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFEL 488
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L+ DRM K +E FN ++Q C + +++EAR +F ++ R P++ +
Sbjct: 489 LKDMDRM---------KVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISF 539
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G+ GD+ +EM+ GF P+V+TYN + G CK A L +EM
Sbjct: 540 NTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVS 599
Query: 276 VACLPSLQTITTLIHGAGLV 295
P T TLI G V
Sbjct: 600 KGMTPDDTTYFTLIEGIAKV 619
>gi|410109893|gb|AFV61026.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
fucata]
Length = 414
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 74 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 130
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 131 LMHRFCK--------DGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF-DEMLVKGLVPNSVTFTTLIDGHC 241
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 301
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ D+V Y + GL + K+ M
Sbjct: 302 TYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGXSVDAEKMLREM 361
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 362 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP +
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 231
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
++ + + +Y L + K DLD ++ + ++ TR
Sbjct: 292 SMKGLKPDKITYTTL------IDGCCKDGDLDTAFEHRKRMIQENTR 332
>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 735
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 199/435 (45%), Gaps = 19/435 (4%)
Query: 54 LLQHLP-QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHI 112
LL ++P Q L++ + V+ + + ++A E F L+ F P F K +HI
Sbjct: 168 LLNNMPSQGCELNAVVYCTVISGFYEENYQ-VEAYELFNKMLRLGIF-PHIATFNKLMHI 225
Query: 113 LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQ-SYEETLEAFDRMEREI 169
L + + + +L++ V + P+L T L R + + + +EA + + + +
Sbjct: 226 LCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMV 285
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV 228
G+ +N ++ + ++++A + F P+ T L++G + GD+
Sbjct: 286 NKGLEP-DDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDI 344
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+ E + +G +PS+V YN I G ++G A++L +M + P + T +
Sbjct: 345 DHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLV 404
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G + + A L + + PDI +N +I + ++ A+ ++D M +
Sbjct: 405 INGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGV 464
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D +TY+++ GL K++ E V + + ++E +P T +L++ C +V L+
Sbjct: 465 TPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALD 524
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM---LQR 465
L + +RG P + +++G C+ G +EA++ ++M E YR+ +
Sbjct: 525 LLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRM--------EQQYRICHTVAT 576
Query: 466 YLVQANANEKLEDLD 480
Y + NA + D+D
Sbjct: 577 YNIMINAFSEKLDMD 591
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/433 (24%), Positives = 185/433 (42%), Gaps = 41/433 (9%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWEL---MSH----------------VQRTHPSLLTLKS 141
P+ ++ ++IL YF+QA ++ M H RT L L+
Sbjct: 109 PSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRL 168
Query: 142 MSIMLSR------------ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
++ M S+ IS F +EA++ + + +GI + FN L+ C
Sbjct: 169 LNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIAT-FNKLMHILC 227
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESG-------DVTAMEMFYHEMVLR 241
+ ++E + K+L PN T NI + G G V E + H+MV +
Sbjct: 228 KKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNK 287
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P TYN I GY K G DA R+ ++ + +P T +LI G +I A
Sbjct: 288 GLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHA 347
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
LF+E + LKP I YN +I L + + A++LM++M ++ + D TY+ + G
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L K + L + I ++P T L+ +C ++D + + + G P
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ ++ GLC + E+ E K ++ + + +Y +L L +A + DL
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527
Query: 482 MIKNLQAVLPPPT 494
I+N + ++P P
Sbjct: 528 EIRN-RGLIPDPV 539
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 125/280 (44%), Gaps = 3/280 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A ++ +++ + P+ T N L+ G+ + + M
Sbjct: 401 YNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMW 460
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TYN ++G CK D M F+ + CLP++ T LI R +
Sbjct: 461 SHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVT 520
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK-RIGHDNVTYHTM 358
+A L +E+ R L PD ++ +IS DL+ A +L ME++ RI H TY+ M
Sbjct: 521 EALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIM 580
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ ++ KL+ M + P + T +++ FC V+ G + I+ GF
Sbjct: 581 INAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGF 640
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
P ++ LC + R EA ++VR V EA
Sbjct: 641 VPSLTTFGRVINCLCVQHRVHEAVGIV-HLMVRTGVVPEA 679
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 84/186 (45%), Gaps = 11/186 (5%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+++T +I++ + K + E L+ + + + F ++ FC +
Sbjct: 501 PNIITY---NILIESLCKARKVTEALDLLEEIRNRGLIP----DPVSFGTVISGFCNNGD 553
Query: 194 MKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+ EA +F ++ R T NI++ F E D+ + +HEM +G P TY
Sbjct: 554 LDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYR 613
Query: 252 IRIDGYCKKGCFGDAMR-LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
+ IDG+CK G L +E+E + +PSL T +I+ + +H+A + M +
Sbjct: 614 VMIDGFCKVGNVNSGYDFLLKEIE-IGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVR 672
Query: 311 RNLKPD 316
+ P+
Sbjct: 673 TGVVPE 678
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 42/220 (19%), Positives = 77/220 (35%), Gaps = 35/220 (15%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G V + M PS+ +YN ++ + G F A +++ M+ P
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAP- 144
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
D+ + I S R + AA+ L++
Sbjct: 145 ----------------------------------DVCTFTIRIKSFCRTKRPLAALRLLN 170
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + + V Y T+ G + + +L+++M+ P T LM C
Sbjct: 171 NMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKG 230
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ G L ++ G CP+ ++ + GLC +G E A
Sbjct: 231 HLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEGA 270
>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 644
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 90/367 (24%), Positives = 158/367 (43%), Gaps = 11/367 (2%)
Query: 103 PDAFEKTLHILARMRYF-----DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P F LH R +Y D A + + HP ++ + +L+ I+K + Y
Sbjct: 34 PSPFLSLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPP-SIVDFAKILTSITKVKRYST 92
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
L +M+ GI NVL+ +FC + A SV K+L P+ +
Sbjct: 93 VLSLSRKMDS---FGI-PHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFT 148
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G G + + +M+ GF+P VV Y I+G CK G A+RL ME+
Sbjct: 149 TLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKG 208
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + TLIH R QA LF EM + + P+I N+++ +L +
Sbjct: 209 NCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHV 268
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L++EM + +I + ++ T+ L K + + D M + P T L+
Sbjct: 269 NTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDG 328
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C+ +D + ++ ++ +G P+ + + L+ G C R ++A ++M ++ +
Sbjct: 329 HCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPN 388
Query: 457 EASYRML 463
+Y L
Sbjct: 389 TVTYNTL 395
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 124/262 (47%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ + C ++ +A ++F +++++ +PN T N L+ G+ + +EMV
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMV 276
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+ ++ +D CK+G A + + M + P + T T LI G L +
Sbjct: 277 DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMD 336
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++FD M + P++ +YN +I+ + ++ AM L +EM +++ + VTY+T+
Sbjct: 337 EAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLI 396
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL L+ L+ M+ +P T +L+ + C N +D + L +
Sbjct: 397 HGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLD 456
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P +++ G+C G E+A
Sbjct: 457 PDIQIYTIVIDGMCRAGELEDA 478
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 99/215 (46%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + M +A +F ++ + PN T N L+ G G + + EMV
Sbjct: 357 YNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMV 416
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTY I +D CK AM L + +E P +Q T +I G +
Sbjct: 417 ACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELE 476
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR LF + + LKP++ YN M L + L+ A +L EM+E D TY+T+
Sbjct: 477 DARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTIT 536
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
G ++++ +L + M+ F T +L+
Sbjct: 537 QGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 98/441 (22%), Positives = 174/441 (39%), Gaps = 34/441 (7%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD ++ TL+ L +T S+ + RL + G + P
Sbjct: 177 PDVVIYATLINGLCKTGHTSAAI------RLLRSMEKG--------------NCQPDVVV 216
Query: 106 FEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ +H L + R QA+ L S + + P+++T S+ L + +++ L +
Sbjct: 217 YGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLN--E 274
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
++ +I + ++ A C + + +A V + S P+ T L+ G
Sbjct: 275 MVDSKIMPN-----AISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGH 329
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
++ + MV +G P+V +YN I+GYCK AM LFEEM R +P+
Sbjct: 330 CLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNT 389
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T TLIHG V + A LF EM PD+ Y ++ L + L+ AM L+
Sbjct: 390 VTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKA 449
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+E + D Y + G+ ++ LE L+ + P T ++ C
Sbjct: 450 IEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGL 509
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+D L+ + + G + + G A + ++ML R ++ +
Sbjct: 510 LDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTL 569
Query: 463 LQRYLVQANANE----KLEDL 479
L L ++ KLED+
Sbjct: 570 LVGMLSDDGLDQSEAHKLEDM 590
>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
Length = 695
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ A C + + EA+ V + R P+ T N L+ G+ +V ++ MV
Sbjct: 268 FNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMV 327
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P V+ YN+ IDGYCK +AM LF+E+ +P++ + +LI G I
Sbjct: 328 KRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRIS 387
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++L DEM PD+ YN +I +L + + A+ ++ M +K + + VTY+ M
Sbjct: 388 HVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + + +++RM++ P +L+ +C VD + L+ + +
Sbjct: 448 DGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLI 507
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + + L+ GLC+ GR E +M + +Y +L + +K L
Sbjct: 508 PDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISL 567
Query: 480 DRMIKNLQAVLP 491
R I ++ + P
Sbjct: 568 FRQI--VEGIWP 577
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 161/345 (46%), Gaps = 18/345 (5%)
Query: 154 SYEETLEAFDRME-----REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL 204
+Y +E + E RE+F + K G E +NVL+ +C K + EA +F +L
Sbjct: 302 TYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKEL 361
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++ P + N L+ G SG ++ ++ EM P VVTYNI ID CK+G
Sbjct: 362 CNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRI 421
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ + M + P++ T ++ G L N++ A+ +F+ M K L+PDI YN +
Sbjct: 422 LEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ + ++ A+ L EM K + D +Y+++ GL + V +L D M +
Sbjct: 482 INGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQ 541
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +L+ FC D ++L+ +++ G P + +V LC + + A +
Sbjct: 542 SPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAED 600
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANAN-------EKLEDLDR 481
K +L+ + +Y +L L + + K+ED DR
Sbjct: 601 ALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDR 645
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C+ +E + K++ P++ T NIL+ + G + + M
Sbjct: 233 YNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMS 292
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P +VTYN ++GYC + +A LF M + P + LI G + +
Sbjct: 293 KRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVD 352
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF E+ +NL P I +YN++I L ++ +L+DEM D VTY+ +
Sbjct: 353 EAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILI 412
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + + M++ P T +M +C+ V++ +++ ++ G
Sbjct: 413 DALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLE 472
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++L+ G C +EA K+M + ASY L
Sbjct: 473 PDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 151/347 (43%), Gaps = 19/347 (5%)
Query: 99 FTPTPDA-FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSY 155
F P P + F+K L + RM ++ A L + +Q PS+ T + I+ +
Sbjct: 50 FPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTIL------INCYFHQ 103
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
T AF + I K G + FN ++ FC + +A LL++ +
Sbjct: 104 SHTAFAF-----SLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLF 158
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G ++G + A EM +P++V Y+ IDG CK G DA+ L
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
++ L T +LI G V + QL +M + N+ PD +N +I +L +
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+ A ++ M ++ D VTY+ + G + +L++RM++ P
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+L+ +C VD + L+ L ++ P + + L+ GLC+ GR
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGR 385
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 124/284 (43%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + +A + ++ R + T N L+ G G + +MV
Sbjct: 198 YSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMV 257
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P T+NI ID CK+G +A + M + P + T L+ G N+H
Sbjct: 258 RENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVH 317
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LF+ M KR L+PD+ YN +I + + ++ AM L E+ K + +Y+++
Sbjct: 318 EARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL S + V KL D M P T +L+ C R+ L + ++ +G
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ + ++ G C R A + +M+ + +Y +L
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVL 481
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 147/320 (45%), Gaps = 17/320 (5%)
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFG---SEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+F++ ++ + F+RM +R F + F+ LL A A S+F +L S+
Sbjct: 32 RFRNVDDAVTCFNRM-------VRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSK 84
Query: 208 -FAPNNKTMNILL-LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
+P+ T IL+ F +S A + ++ G++P++VT+N I+G+C G
Sbjct: 85 GISPSIATFTILINCYFHQSHTAFAFSLL-ATILKSGYQPNLVTFNTIINGFCINGMIFK 143
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ + + L T TLI+G I A L EM K +++P++ Y+A+I
Sbjct: 144 ALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALID 203
Query: 326 SLIRCRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
L C+D ++ A+ L ++ E+ I D VTY+++ G + V +L +M+
Sbjct: 204 GL--CKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENV 261
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +L+ C R+ + + RG P + L+ G CSR EA E
Sbjct: 262 DPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARE 321
Query: 444 CSKQMLVRRRQVSEASYRML 463
+M+ R + +Y +L
Sbjct: 322 LFNRMVKRGLEPDVLNYNVL 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 98/221 (44%), Gaps = 6/221 (2%)
Query: 164 RMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+ ++IF + K G E +NVL+ +C + + EA +F ++ + P+ + N L
Sbjct: 457 NVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSL 516
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G G + ++ EM G P V+TYNI +D +CK F A+ LF ++
Sbjct: 517 IDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GI 575
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T ++ + A + P++ Y +I++L + AM
Sbjct: 576 WPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
L+ +ME+ D +T+ + L++ + + KL + MI
Sbjct: 636 LLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMI 676
>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
Length = 589
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 91/395 (23%), Positives = 181/395 (45%), Gaps = 16/395 (4%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLS 147
F ++ P + ++ R ++A+ELM + + P + T ++ L
Sbjct: 119 FLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLC 178
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+ K+ L A ++ + +G+ + +N+LL C M +A +F ++ S+
Sbjct: 179 KTGKY------LRAKGVLDEMLKIGMSP-DTATYNILLVECCRNDNMMDAERIFDEMPSQ 231
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
P+ + + L+ ++G + ++ +M G P V Y I I G+C+ G +A
Sbjct: 232 GVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEA 291
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+++ +EM C+ + T T+++G + + +A +LF EM +R + PD + +I+
Sbjct: 292 LKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLING 351
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ ++N A+ L + M ++ + D VTY+T+ G K S +E V +L++ MI + P
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPN 411
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ +L+ +C V LW ++++GF + +V G C G +A E
Sbjct: 412 HISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLS 471
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
ML++ +Y L N K E++DR
Sbjct: 472 NMLLKGIVPDGITYNTL------INGFIKEENMDR 500
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/362 (23%), Positives = 155/362 (42%), Gaps = 12/362 (3%)
Query: 95 QHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRIS 150
+ P PD +F + +L++ DQA + ++ P + +I++
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY---TILIGGFC 283
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA- 209
+ E L+ D M + V +N +L C +K + EA +F ++ R
Sbjct: 284 RNGVMSEALKVRDEMLEQGCV----LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVF 339
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T L+ G+ + G++ + M+ R +P VVTYN IDG+CK L
Sbjct: 340 PDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNEL 399
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ +M P+ + LI+G + + +A +L+DEM ++ + I N ++ R
Sbjct: 400 WNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCR 459
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ A E + M K I D +TY+T+ G +K ++ L ++M +P T
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+++ F R+ + +I+RG P L+ G ++ +EAF +ML
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579
Query: 450 VR 451
R
Sbjct: 580 QR 581
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 152/338 (44%), Gaps = 9/338 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+AL++F+ +++ P + + R +A ++ + +L + + +
Sbjct: 255 QALKYFR-DMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE-QGCVLDVVTYNT 312
Query: 145 MLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L+ + K + E E F M ER +F F + L+ + M +A ++F
Sbjct: 313 ILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTT-----LINGYSKDGNMNKAVTLFEM 367
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ R P+ T N L+ GF + ++ + +++M+ R P+ ++Y I I+GYC GC
Sbjct: 368 MIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGC 427
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A RL++EM ++ T T++ G N +A + M + + PD YN
Sbjct: 428 VSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNT 487
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ I+ +++ A L+++ME + D +TY+ + G + ++ + +MIE
Sbjct: 488 LINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERG 547
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P T L+ + + ++ RGF P
Sbjct: 548 VNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++L++ + ++++E F L S+ + N LL G + G V Y E+V
Sbjct: 30 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 89
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + +V T NI I+ CK + +ME P + T TLI+ +
Sbjct: 90 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 149
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L D M + LKP + YNA+I+ L + A ++DEM + + D TY+ +
Sbjct: 150 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 209
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
++ + +++D M VP + L+ N +D L + + + G
Sbjct: 210 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 269
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P +L+ G C G EA + +ML
Sbjct: 270 PDNVIYTILIGGFCRNGVMSEALKVRDEML 299
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%)
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T+NI++ ++ + + F +M +G P VVTYN I+ YC++G +A L
Sbjct: 96 NVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELM 155
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ M P + T +I+G +A+ + DEM K + PD YN ++ R
Sbjct: 156 DSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRN 215
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
++ A + DEM + + D V++ + L K+ L+ K + M P
Sbjct: 216 DNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIY 275
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+L+ FC N + L + ++++G + ++ GLC EA E +M
Sbjct: 276 TILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTE 335
Query: 451 R 451
R
Sbjct: 336 R 336
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 19/247 (7%)
Query: 77 FAAHSNGLKALEFFKFTLQHP------HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
++ N KA+ F+ +Q + D F K + M ++ W M +
Sbjct: 352 YSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKG----SEMEKVNELWNDMIS-R 406
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R +P+ + S I+++ E +D M + F + N +++ +C
Sbjct: 407 RIYPNHI---SYGILINGYCNMGCVSEAFRLWDEMVEKGF----EATIITCNTIVKGYCR 459
Query: 191 QKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+A LL P+ T N L+ GF + ++ ++M G P V+T
Sbjct: 460 AGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVIT 519
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN+ ++G+ ++G +A + +M P T T+LI+G N+ +A ++ DEM
Sbjct: 520 YNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEML 579
Query: 310 KRNLKPD 316
+R PD
Sbjct: 580 QRGFVPD 586
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/235 (21%), Positives = 98/235 (41%), Gaps = 45/235 (19%)
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
++GC +A R+ + + C+ S+ +L+ G V + A +++ E+ + ++ ++
Sbjct: 44 REGC--EAFRVLKS--KGLCV-SINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVY 98
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
N MI++L + + + + +MEEK + D VTY+T+ + LE +L D M
Sbjct: 99 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
GK G P + ++ GLC G++
Sbjct: 159 -SGK----------------------------------GLKPCVFTYNAIINGLCKTGKY 183
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL--QAVLP 491
A +ML A+Y +L LV+ N+ + D +R+ + Q V+P
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNIL---LVECCRNDNMMDAERIFDEMPSQGVVP 235
>gi|410109903|gb|AFV61031.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
montevidensis]
Length = 431
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKIDDANELF-DEMLVKGLVPNSVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSMKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ D+V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKDGDLDTAFEHRKRMIQENTRLDDVVYTALISGLCREGQSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 103/227 (45%), Gaps = 6/227 (2%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRIAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP +
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKIDDANELFDEMLVKGLVPNSV 248
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
++ + + +Y L + K DLD ++ + ++ TR
Sbjct: 309 SMKGLKPDKITYTTL------IDGCCKDGDLDTAFEHRKRMIQENTR 349
>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
Length = 747
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/409 (22%), Positives = 180/409 (44%), Gaps = 17/409 (4%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
Q +P + N+L R F N AL FF ++ P + + ++R
Sbjct: 200 QVSP--NVFTYNILIRGFCLAGNLDVALRFFD-RMEKKGCLPNVVTYNTLIDGYCKLRKI 256
Query: 120 DQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D +EL+ ++ P+L++ + L R + + L ++ R +
Sbjct: 257 DDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNK---------RGYS 307
Query: 178 SEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+E +N L++ +C + +A + ++L +P+ T L+ ++G++ F
Sbjct: 308 LDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEF 367
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+M +RG P+ TY +DG+ +KG +A R+ +EM PS+ T LI+G +
Sbjct: 368 LDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCI 427
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ A + ++M ++ L PD+ +Y+ ++S R D++ A+ + +M K I D +T
Sbjct: 428 AGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTIT 487
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y ++ G + + C L+D M+ P T L+ +C+ + + L ++
Sbjct: 488 YSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMV 547
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++G P +L+ GL + R EA ++ S+ +Y L
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTL 596
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 105/416 (25%), Positives = 172/416 (41%), Gaps = 32/416 (7%)
Query: 51 HPTLLQHLPQT-TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
HP L HL TP E L + +N L+F + H FT T
Sbjct: 35 HPYQLHHLSANFTP------EAASNLLLKSQNNQELILKFLTWANPHQFFTLRCKCI--T 86
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
LHIL R + + A L V L + S++ F+S +ET + +
Sbjct: 87 LHILTRFKLYKTAQTLAEDVA---AKTLDDEDASLV------FRSLQETYDLCNST---- 133
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARS-VFVKLLSRFAPNNKTMNILL-LGFKESGD 227
S F+++++++ + +A S V + F P + N +L + +
Sbjct: 134 --------SSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRN 185
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
++ E + EM+ P+V TYNI I G+C G A+R F+ ME+ CLP++ T T
Sbjct: 186 ISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNT 245
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI G +R I +L M + L+P++ +YN +I+ L R + ++ EM ++
Sbjct: 246 LIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRG 305
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
D VTY+T+ G K ++ M+ P T L+ C ++
Sbjct: 306 YSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRAT 365
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ RG CP+ LV G +G EA+ K+M+ S +Y L
Sbjct: 366 EFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNAL 421
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 90/351 (25%), Positives = 158/351 (45%), Gaps = 29/351 (8%)
Query: 119 FDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
F QA + + + R PS++T S+ + + K + E D+M +R
Sbjct: 326 FHQALVMHAEMLRHGLSPSVITYTSL---IHSMCKAGNMNRATEFLDQMR------VRGL 376
Query: 177 GSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEM 233
E + L+ F + M EA V +++ F+P+ T N L+ G +G +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+M +G P VV+Y+ + G+C+ +A+R+ +M P T ++LI G
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
R +A LFDEM + L PD Y A+I++ DL A++L +EM EK + D V
Sbjct: 497 EQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVV 556
Query: 354 TYHTMFFGLMKSSGLEGVCKL---------------YDRMIEGKFVPKTRTVVMLMKFFC 398
TY + GL K + +L Y +IE + ++VV L+K FC
Sbjct: 557 TYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFC 616
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ + ++ ++++ P G A ++++ G C G +A+ K+M+
Sbjct: 617 MKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMV 667
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 22/311 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C +M +A +V + + P+ + + +L GF S DV +MV
Sbjct: 418 YNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMV 477
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P +TY+ I G+C++ +A LF+EM RV P T T LI+ + ++
Sbjct: 478 AKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQ 537
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIR-CRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A QL +EM ++ + PD+ Y+ +I+ L + R A L+ E+ + D VTYHT+
Sbjct: 538 KAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSD-VTYHTL 596
Query: 359 F-----------FGLMKSSGLEGVC----KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
L+K ++G+ ++++ M+E P +++ C +
Sbjct: 597 IENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDI 656
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+L+ ++ GF H + LV L G+ E +L R ++SEA
Sbjct: 657 RKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL-RSCELSEAEQ--- 712
Query: 464 QRYLVQANANE 474
+ LV+ N E
Sbjct: 713 AKVLVEINHRE 723
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 175/434 (40%), Gaps = 80/434 (18%)
Query: 64 LSSTLVENVLGRLFAAHSNGL---KALEFFK---FTLQHPHFTPTPDAFEKTLHILARMR 117
LS TL+ L ++ S+ L KAL F K + L H TP+A L ++
Sbjct: 3 LSKTLIRRSLSTFTSSPSDSLLADKALTFLKRHPYQLHHLSANFTPEAASNLL-----LK 57
Query: 118 YFDQAWELMSHVQRTHP-SLLTLKSMSIMLSRISKFQSYE--ETLEAFDRMEREIFVGIR 174
+ ++ + +P TL+ I L +++F+ Y+ +TL A D V +
Sbjct: 58 SQNNQELILKFLTWANPHQFFTLRCKCITLHILTRFKLYKTAQTL-AED-------VAAK 109
Query: 175 KFGSEEFNVLLQAFCTQKEM-KEARSVF---VKLLSRFAPNNKTMNILLLGFKESGDVTA 230
E+ +++ ++ ++ SVF VK SR +K ++I+
Sbjct: 110 TLDDEDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIV------------ 157
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCK-KGCFGDAMRLFEEMERVACLPSLQTITTLI 289
H GF P V++YN +D + K A +F+EM + P++ T LI
Sbjct: 158 -----HLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILI 212
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G L N+ A + FD M K+ P++ YN +I + R ++ EL+ M K +
Sbjct: 213 RGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLE 272
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ ++Y+ + GL + EG RM E FV +N
Sbjct: 273 PNLISYNVVINGLCR----EG------RMKEISFVLTE-------------------MNK 303
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GY +D + L+ G C G + +A +ML S +Y L + +
Sbjct: 304 RGYSLDEV------TYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCK 357
Query: 470 A-NANEKLEDLDRM 482
A N N E LD+M
Sbjct: 358 AGNMNRATEFLDQM 371
>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
Length = 585
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 150/337 (44%), Gaps = 11/337 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A + + HP T+ + +L+ I+K + Y ++M+ GI
Sbjct: 48 LDDALSSFNRMLHMHPPPSTV-DFNRLLTSIAKTKQYPTVFSLSNQMDS---FGIPP-DV 102
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
N+L+ +FC A SV K+L P+ T L+ G G + + +
Sbjct: 103 YTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDK 162
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ GF+P+VVTY I+G CK G A+RL ME+ C P + T++I R
Sbjct: 163 MIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQ 222
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A LF +M + + PDI Y ++I SL + L+++M +I D V + T
Sbjct: 223 VTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFST 282
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ L K + + D MI P T LM C+ +D + ++ ++ G
Sbjct: 283 VVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNG 342
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA---FE--CSKQML 449
+ P+ + + L+ G C R ++A FE C K+++
Sbjct: 343 YAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELI 379
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/392 (21%), Positives = 163/392 (41%), Gaps = 14/392 (3%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P + + L + R +A+ L S + Q P + T S+ L +
Sbjct: 197 SMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLC 256
Query: 151 KFQSYEETLEAF--DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+++ L ++ ++ + F+ ++ A C + ++ EA V ++ R
Sbjct: 257 EWKHVTTLLNQMINSKIMPDVVI---------FSTVVDALCKEGKITEAHDVVDMMIIRG 307
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T N L+ G ++ + MV G+ P+V++YN I+GYCK A
Sbjct: 308 VEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKAT 367
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
LFEEM + +P+ T TL+HG V + A LF EM PD+ Y ++ L
Sbjct: 368 YLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYL 427
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ L+ AM L+ +E + D Y + G+ ++ LE ++ + P
Sbjct: 428 CKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNV 487
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
RT +++ C +D L+ + G P G + + GL A + ++
Sbjct: 488 RTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQE 547
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
ML R ++ +L L ++ ++ +
Sbjct: 548 MLARGFSADVSTTTLLVEMLCDDKLDQSVKQI 579
>gi|224107983|ref|XP_002314677.1| predicted protein [Populus trichocarpa]
gi|222863717|gb|EEF00848.1| predicted protein [Populus trichocarpa]
Length = 481
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 166/375 (44%), Gaps = 13/375 (3%)
Query: 25 STTTQSSEIERITRIINDH-PFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
+ + +I+++ I+ H P D + + T L S L+E +
Sbjct: 27 AESGTGGDIDKVKGILKRHFPSEDAVVKALDESGINATNDLVSQLLERF-------SNQW 79
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
+ AL F + + TP ++ + IL + + F W++++ + + + + +MS
Sbjct: 80 ITALGVFIWAKNQTGYVHTPRLYDLVVDILGKCKKFGIMWKVVNEMNELNGQV-SFSTMS 138
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I++ R++ Y++ ++ +E+ ++K + N+++ A Q K+A SVF++
Sbjct: 139 IVVRRLASSGMYKDVIDVLRGLEK---YRVKK-DTVALNMVMHALAKQGGAKDAYSVFLE 194
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++ + NIL+ G+ E+ + EM GFRP +Y I YCK+ F
Sbjct: 195 FKDSITLDSHSFNILIHGYCEARMLDDARKTMEEMEKHGFRPDASSYTCFIKAYCKQKDF 254
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+ + EM C P + + I G R I++A +++++M K + KPD ++ +
Sbjct: 255 RNVEVILNEMGEKGCEPDVIAYSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTL 314
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L R LN A + ++ME + D TY+ M + + KL +RM
Sbjct: 315 IYVLGRSGRLNDAWYVFEDMENHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSC 374
Query: 384 VPKTRTVVMLMKFFC 398
P T L+K C
Sbjct: 375 KPDLETYQPLLKMCC 389
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/203 (21%), Positives = 86/203 (42%), Gaps = 1/203 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++ ++A +++ EA V+ K+ + P+ K + L+ SG + + +M
Sbjct: 276 YSIYIRALGKARKINEALEVYEKMNKNSCKPDAKFFSTLIYVLGRSGRLNDAWYVFEDME 335
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + TYN I C A++L E ME +C P L+T L+ ++++
Sbjct: 336 NHGVSRDLWTYNAMIYHACANRQGNSALKLLERMEVNSCKPDLETYQPLLKMCCKMKDMK 395
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L M N++ D+ Y +I L L A + I + TY +
Sbjct: 396 VLKFLLSHMFNNNVRIDLSTYALLIRELAESGKLEHACFFFQDAVLNGIVPKDRTYEILL 455
Query: 360 FGLMKSSGLEGVCKLYDRMIEGK 382
L +++ +E K+ M++ K
Sbjct: 456 KELGQNNMVEMKGKIEKLMLQAK 478
>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 915
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/331 (26%), Positives = 153/331 (46%), Gaps = 8/331 (2%)
Query: 156 EETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNK 213
+E L+ F +M E + +R + V++ A C EA ++F ++ + PN
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTY-----TVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T +L+ E + + + M+ +G PSVVTYN IDGYCKKG A+ + M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E C P+ +T LI G +NIH+A L +M +R L+P++ YN +I + DL
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+A +L+ M E + D TY L K +E L++ + E L
Sbjct: 466 GSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTL 525
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +C +V G L ++ G P+ + L+ G C ++EA M+ R
Sbjct: 526 IDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDI 585
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL-DRMI 483
+ + +Y +L L++ + ++ D+ D+M+
Sbjct: 586 EPAADTYTILIDNLLKDDEFDQAHDMFDQML 616
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 100/423 (23%), Positives = 174/423 (41%), Gaps = 32/423 (7%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
P+ HP+L +P P + + LFA + + AL FF + Q F +
Sbjct: 60 PNWQKHPSLKNLIPSIAP-------SHISALFALNLDPQTALAFFNWIGQKHGFKHNVQS 112
Query: 106 FEKTLHILARMRYFDQAWEL----MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
L+IL Y A + + + +L L+ + M R+ F+ ++ TL
Sbjct: 113 HVSMLNILVPNGYLRIAENMRILMIKSTDSSENALFVLEMLRSMNRRVDAFK-FKLTLRC 171
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLL 220
++ + +LL F EMK SV++++L PN T+N ++
Sbjct: 172 YNMLL----------------MLLSRFLMIDEMK---SVYLEMLDDMVTPNIFTLNTMVN 212
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G+ + G+V E++ ++V G TY I GYC+ A +F M CL
Sbjct: 213 GYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLR 272
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + T LIHG R + +A +LF +M + N P + Y +I +L + A+ +
Sbjct: 273 NEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMF 332
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM EK + TY + L + S + K+ + M+E +P T L+ +C
Sbjct: 333 KEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKK 392
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
L + + P+ + L+ G C +A +ML R+ Q + +Y
Sbjct: 393 GLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTY 452
Query: 461 RML 463
+L
Sbjct: 453 NIL 455
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 157/393 (39%), Gaps = 11/393 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
+AL FK + H P + + L FD A ++++ + PS++T ++
Sbjct: 327 EALNMFK-EMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ K LE ME + +N L+ FC K + +A S+
Sbjct: 386 ---IDGYCKKGLSASALEILSLMESNNCSP----NARTYNELILGFCRGKNIHKAMSLLH 438
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K+L R PN T NIL+ G + GD+ + M G P TY++ ID CK+G
Sbjct: 439 KMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRG 498
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A LFE ++ + +TLI G V + R L D+M P+ YN
Sbjct: 499 LVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYN 558
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++I + ++ A L+D M ++ I TY + L+K + ++D+M+
Sbjct: 559 SLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLST 618
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P + +C + R+ L + +G P L + G + A
Sbjct: 619 GSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGA 678
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
F K+M + S +Y L ++L A E
Sbjct: 679 FGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKE 711
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 135/336 (40%), Gaps = 31/336 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEMV 239
++V + C + ++EARS+F L + N+ + + L+ G+ + G V+ +M+
Sbjct: 487 YSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKML 546
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ +TYN IDGYCK+ F +A L + M + P+ T T LI
Sbjct: 547 SAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFD 606
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA +FD+M PD+ Y A I + L A L+ +M K I D + Y
Sbjct: 607 QAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFI 666
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK------------------------ 395
+ ++G + RM E P T L+K
Sbjct: 667 DAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVA 726
Query: 396 ---FFCVNFRVD--LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
F RVD L+L+G + + G P+ + +TGLC G E A M
Sbjct: 727 SNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKE 786
Query: 451 RRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKN 485
+ + +E Y L Q E + LD MI+N
Sbjct: 787 KGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIEN 822
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 69/173 (39%), Gaps = 20/173 (11%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
APN T + G + G + + M +G P+ YN + C+ G +G+A+R
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ M LP L + L+ G N +A+++F + D + +I L+
Sbjct: 815 WLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLL 874
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+ L D+ + FG+M++ G + K Y +IEG
Sbjct: 875 K-------KGLSDKCSD-------------LFGIMETQGCQIHPKTYSMLIEG 907
>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
Length = 847
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 101/441 (22%), Positives = 186/441 (42%), Gaps = 43/441 (9%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LL+ LP+ L + R AH +G A F L+ F P F LH L
Sbjct: 67 LLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVF-PDVATFNNVLHAL 125
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ ++ L++ V + + MS+ +KF
Sbjct: 126 CQKGDIMESGALLAKVLK--------RGMSV-----NKFTC------------------- 153
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
N+ ++ C ++EA ++ + + AP+ T N L+ G + V
Sbjct: 154 --------NIWIRGLCEGGRLEEAVALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQ 205
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ M+ +G P TYN IDGYCK+ +A L ++ +P T +LI+G
Sbjct: 206 YLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLC 265
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
++ +A +LF+E ++LKPD+ YN+++ L R + A+++M+EM E D
Sbjct: 266 AEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIW 325
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ + GL K + + + I ++P T ++ +C ++D L L +
Sbjct: 326 TYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERM 385
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P + ++ GLC G+ +E E ++M+++ + + +Y +L + N
Sbjct: 386 WMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQL 445
Query: 474 EKLEDLDRMIKNLQAVLPPPT 494
E+ + +++ Q L P T
Sbjct: 446 EEASGV--IVRMSQDGLVPDT 464
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 67/313 (21%), Positives = 148/313 (47%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C Q + A V +++ P+ T NI++ G + G+++ + ++ +
Sbjct: 292 YNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAI 351
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G+ P V T+N IDGYCK+ A++L E M P T ++++G
Sbjct: 352 VKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAK 411
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + F+EM + +P+ YN +I + + L A ++ M + + D ++++T+
Sbjct: 412 EVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLI 471
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ L+G L+ ++ E + T +L+ + + + ++G +I +G+
Sbjct: 472 HGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYK 531
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLED 478
P + +LV G C + A+ +M+ + S A++ R+L + +E +
Sbjct: 532 PDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAI 591
Query: 479 LDRMIKNLQAVLP 491
+ M++ V+P
Sbjct: 592 IHIMVR--MGVVP 602
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 139/323 (43%), Gaps = 8/323 (2%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
EA + ++ IF G + L+ C + +++ A +F + ++ P+ N L
Sbjct: 237 EATELLKDAIFKGFVP-DRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSL 295
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G G + +EMV G P + TYNI I+G CK G DA + +
Sbjct: 296 VKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGY 355
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
LP + T T+I G + A QL + M + PD YN++++ L + E
Sbjct: 356 LPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNE 415
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+EM K + +TY+ + K + LE + RM + VP T + L+ FC
Sbjct: 416 TFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFC 475
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
N +D L+ L ++G+ ++L+ S+ + A + +M+ + +
Sbjct: 476 RNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLY 535
Query: 459 SYRMLQRYLVQANANEKLEDLDR 481
+YR+L + + K ++DR
Sbjct: 536 TYRVL------VDGSCKAANVDR 552
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 129/285 (45%), Gaps = 6/285 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ +C + ++ A + ++ + AP+ T N +L G ++G + + EM+
Sbjct: 362 FNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G RP+ +TYNI I+ +CK +A + M + +P + TLIHG ++
Sbjct: 422 LKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLD 481
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF ++ ++ +N +I + ++ A ++ EM K D TY +
Sbjct: 482 GAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLV 541
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K++ ++ M+ FVP T ++ +N RV + + ++ G
Sbjct: 542 DGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVV 601
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
P +++ T L + + A + + L+++ +S +Y +L
Sbjct: 602 P-----EVVDTILSTDKKEIAAPKILVEELMKKGHISYPTYEVLH 641
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 96/217 (44%), Gaps = 1/217 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
Y M+ G P T+ +RI +C G A+RL + C T++ G
Sbjct: 33 YVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYA 92
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + AR LFDEM +R++ PD+ +N ++ +L + D+ + L+ ++ ++ + + T
Sbjct: 93 HGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFT 152
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ GL + LE L + M + P T LM+ C + +V ++
Sbjct: 153 CNIWIRGLCEGGRLEEAVALVESM-DAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMM 211
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++G P + ++ G C R +EA E K + +
Sbjct: 212 NQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFK 248
>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
Length = 474
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 88/342 (25%), Positives = 151/342 (44%), Gaps = 40/342 (11%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S + S I + YE + +E F+GI + ++L+ FC + SV
Sbjct: 66 SKLFSSIVRMGHYETVVYLSKEIE---FLGIEQ-DIHSLSILINCFCHLHRVDFGLSVLS 121
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K+L P+ T LL G G + + M Y +M++RG +P+V TYN+ I+ K G
Sbjct: 122 KILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSG 181
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ ++ME+V C+P++ +TLI G L + +AR +FD M + P++ Y
Sbjct: 182 KANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYT 241
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-------------- 367
++++ + + A++L+DE K + D VT+ T+ GL ++
Sbjct: 242 SLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAH 301
Query: 368 ------------LEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
L+G+CK L+ M P +L+ C ++ G
Sbjct: 302 GHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDG 361
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ LID G P+ + LV LC G EA + ++M
Sbjct: 362 KELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 156/406 (38%), Gaps = 49/406 (12%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F K + RM +++ L ++ + S+SI+++ + L
Sbjct: 60 PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQ-DIHSLSILINCFCHLHRVDFGLS 118
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ I K G E F LL C + +M + ++ +L R PN T
Sbjct: 119 VLSK--------ILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTY 170
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N+++ +SG F +M G P+VV Y+ IDGYC +G +A +F+ M
Sbjct: 171 NVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVS 230
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA---------------- 319
C P++ T T+L++G + I +A QL DE ++ L PDI
Sbjct: 231 KGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLA 290
Query: 320 -------------------YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
Y ++ L + +L A L EM+ + + V Y +
Sbjct: 291 AQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILID 350
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K ++ +L+ R+I+ P T L+ C + L+ + + G P
Sbjct: 351 SLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTP 410
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
A ++++ G A + ++M+ R A+ +L +
Sbjct: 411 DKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALLNDF 456
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 48/97 (49%), Gaps = 1/97 (1%)
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ +L+ FC RVD GL++ ++ G P L+ GLC G+ ++ M
Sbjct: 99 SLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDM 158
Query: 449 LVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
LVR Q + +Y ++ L ++ ANE L L +M K
Sbjct: 159 LVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEK 195
>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 817
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/371 (24%), Positives = 169/371 (45%), Gaps = 14/371 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
KA E+ K + TP+ + + + ++ FD+ ++++ ++ P++++ S+
Sbjct: 439 KAEEWVK-KMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSL 497
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
L + K E L D + R + ++ +N+L+ C ++K+A F
Sbjct: 498 INCLCKDGKILEAEIVLR--DMICRGVLPN-----AQVYNMLIDGSCMVGKVKDALRFFD 550
Query: 203 KLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ S +P T N+L+ G + G +T E F ++ G P V+TYN I GY G
Sbjct: 551 EMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG 610
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+ L+E M+ + P+++T LI G I +L++EM + NL PD YN
Sbjct: 611 NVSKCLGLYETMKNLGIKPTVRTYHPLISGCS-KEGIELVEKLYNEMLQMNLLPDRVVYN 669
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
AMI + A L M ++ I D +TY+++ G + L + L + M
Sbjct: 670 AMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAK 729
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLW-GYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ PK T +L+K C + + G +W +++ F P+ + L GL GR +E
Sbjct: 730 ELAPKADTYDILVKGHC-DLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQE 788
Query: 441 AFECSKQMLVR 451
+M V+
Sbjct: 789 VQVICSEMNVK 799
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 97/209 (46%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F M RG RP+V YN+ I G C++ DA ++F+EM + + S+ T TLI G
Sbjct: 198 FLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYC 257
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
V + A ++ + M ++++ P+I +N+++S L + R + A L+ EME D
Sbjct: 258 KVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGY 317
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY +F GL++ G +LY++ E T +L+ C +V+ +
Sbjct: 318 TYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKF 377
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ G + V G C G +A
Sbjct: 378 TENGLVADEVIYNTFVNGYCRIGDMNKAI 406
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 135/342 (39%), Gaps = 38/342 (11%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+A +ER G+R S FN L+ FC KEM +A K+ + P+ +T N L
Sbjct: 404 KAILTIERMESFGLRP-NSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTL 462
Query: 219 LLGFKE-----------------------------------SGDVTAMEMFYHEMVLRGF 243
+ G+ + G + E+ +M+ RG
Sbjct: 463 IDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGV 522
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+ YN+ IDG C G DA+R F+EM R P+L T LI G + +A
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
++ PD+ YN++IS +++ + L + M+ I TYH + G
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCS 642
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K G+E V KLY+ M++ +P ++ + +L ++D+G P
Sbjct: 643 K-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKM 701
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ L+ G G+ + M + +Y +L +
Sbjct: 702 TYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVK 743
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 80/343 (23%), Positives = 137/343 (39%), Gaps = 38/343 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAP----------------------------- 210
FN LL C ++MKEARS+ ++ ++ F P
Sbjct: 284 FNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQAT 343
Query: 211 ------NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
NN T +ILL G + G V E + G V YN ++GYC+ G
Sbjct: 344 EKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMN 403
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+ E ME P+ T +LI ++ + +A + +M ++ + P + YN +I
Sbjct: 404 KAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLI 463
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-LEGVCKLYDRMIEGKF 383
+ + +++++MEE + + V+Y ++ L K LE L D + G
Sbjct: 464 DGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG-V 522
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P + ML+ C+ +V L + ++ P ++L+ GLC +G+ EA +
Sbjct: 523 LPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAED 582
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
Q+ +Y L A K L +KNL
Sbjct: 583 FLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNL 625
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/423 (20%), Positives = 164/423 (38%), Gaps = 45/423 (10%)
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHVQRTHPSL-LTLKSMSIMLSRISKFQSYEETLEA 161
PD + ++ +R D + + Q T + + + SI+L+ + K E+ E
Sbjct: 314 PDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEI 373
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLL 220
+ V +N + +C +M +A ++ S PN+ T N L+
Sbjct: 374 LKKFTENGLVADEVI----YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLID 429
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV---- 276
F + ++ E + +M +G PSV TYN IDGY K F ++ E+ME +
Sbjct: 430 KFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKP 489
Query: 277 -------------------------------ACLPSLQTITTLIHGAGLVRNIHQARQLF 305
LP+ Q LI G+ +V + A + F
Sbjct: 490 NVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFF 549
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
DEM + + P + YN +I L + L A + + ++ D +TY+++ G +
Sbjct: 550 DEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANA 609
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ LY+ M P RT L+ C ++L L+ ++ P
Sbjct: 610 GNVSKCLGLYETMKNLGIKPTVRTYHPLIS-GCSKEGIELVEKLYNEMLQMNLLPDRVVY 668
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+ ++ G ++A+ + ML + + +Y L ++ KL ++ ++ N
Sbjct: 669 NAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSL---ILGHFREGKLSNIKDLVNN 725
Query: 486 LQA 488
++A
Sbjct: 726 MKA 728
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 76/384 (19%), Positives = 152/384 (39%), Gaps = 13/384 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+K ++ F +++ F + K + +++ E + +++ P++
Sbjct: 158 VKVVDLF-MEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNV 216
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS-EEFNVLLQAFCTQKEMKEARSV 200
+ L R + + E+ FD M I GS +N L+ +C E+ A +
Sbjct: 217 LIGGLCREKRIRDAEKM---FDEM-----CNINLVGSIVTYNTLIDGYCKVGELDAAFKM 268
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ + APN T N LL G + + EM + GF P TY+I DG +
Sbjct: 269 RERMKEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLR 328
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
AM L+E+ + T + L++G + +A ++ + + L D
Sbjct: 329 CDDGNGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVI 388
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN ++ R D+N A+ ++ ME + +++T++++ ++ + +M
Sbjct: 389 YNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMA 448
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P T L+ + D + + + G P+ + L+ LC G+
Sbjct: 449 EKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKIL 508
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
EA + M+ R + Y ML
Sbjct: 509 EAEIVLRDMICRGVLPNAQVYNML 532
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 75/201 (37%), Gaps = 35/201 (17%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F + LF E+E I A ++N+ + D M KR ++P++ YN
Sbjct: 157 FVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNV 216
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L R + + A ++ DEM + VTY+T+ G K L+ K+ +RM E
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T + L++GLC + +EA
Sbjct: 277 VAPNIIT-----------------------------------FNSLLSGLCKMRKMKEAR 301
Query: 443 ECSKQMLVRRRQVSEASYRML 463
K+M V +Y +L
Sbjct: 302 SLLKEMEVNGFMPDGYTYSIL 322
>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Cucumis sativus]
Length = 657
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 133/262 (50%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ + + +++ A S+F ++ + P + T+ I++ G ++G +++ V
Sbjct: 322 FTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFV 381
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF P+ + YN IDG+ K+G A ++ EM V PS T T+LI G NI
Sbjct: 382 SQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNID 441
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L ++M ++ LK DI AY +I + RD+ +A EL++E+ + + Y++M
Sbjct: 442 LALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMI 501
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + +E LY +M+ +T L+ + R+ ++ ++ +G
Sbjct: 502 TGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGIL 561
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P A +L+ GLC++G++E A
Sbjct: 562 PDDRAHTVLINGLCNKGQFENA 583
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 84/357 (23%), Positives = 154/357 (43%), Gaps = 7/357 (1%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
+ P + + + ++A+E S + +T ++ S++ +L K Q
Sbjct: 171 ISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEM-KTKGIRSSVYSLNSILEGYLKCQ 229
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
S++ F+ + F N LL C + +M EA +++ +++++ +PN
Sbjct: 230 SWQNAFTMFNDALESGLANVFTF-----NTLLSWLCKEGKMNEACNLWDEVIAKGISPNV 284
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ N ++LG ++ A Y EM+ GF P+ VT+ I +DGY KKG +A +F
Sbjct: 285 VSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHR 344
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ LP+ T+ +I G + R LF++ + P YN +I I+ +
Sbjct: 345 MKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGN 404
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+N A + EM E I VTY ++ G K + ++ KL + M +
Sbjct: 405 INLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT 464
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ FC + L L G P+ + ++TG + EEA + K+M+
Sbjct: 465 LIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 127/288 (44%), Gaps = 24/288 (8%)
Query: 89 FFKFTLQHPHFTPTP-------DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
F KF Q F PT D F K +I + M V T PS +T S
Sbjct: 377 FNKFVSQG--FVPTCMPYNTIIDGFIKEGNI----NLASNVYREMCEVGIT-PSTVTYTS 429
Query: 142 MSIMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + K + + L+ + M+R+ + + I+ +G+ L+ FC +++MK A +
Sbjct: 430 L---IDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGT-----LIDGFCKRRDMKSAHEL 481
Query: 201 FVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+L + +PN N ++ GFK +V Y +MV G + TY IDG K
Sbjct: 482 LNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLK 541
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A + EM LP + T LI+G AR++ ++M +N+ P +
Sbjct: 542 SGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLI 601
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
YN +I+ + +L A L DEM ++ + DN+TY + G K G
Sbjct: 602 YNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDG 649
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/303 (21%), Positives = 121/303 (39%), Gaps = 35/303 (11%)
Query: 182 NVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+LL A + EAR + K LL + T++++L + G++ E + +
Sbjct: 9 NILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQAKA 68
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG Y+I + C K G A+ L EM +P T T++I N+ +
Sbjct: 69 RGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAE 128
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L D+M ++ +++ +L +A+ L++E+ E + + VTY +
Sbjct: 129 ALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLID 188
Query: 361 GLMKSSGLEGVCKLYDRM---------------IEGKF-------------------VPK 386
G K+ +E + Y M +EG +
Sbjct: 189 GCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLAN 248
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ + C +++ NLW +I +G P+ + + ++ G C + A + K
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308
Query: 447 QML 449
+ML
Sbjct: 309 EML 311
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/284 (21%), Positives = 102/284 (35%), Gaps = 71/284 (25%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++++ C E R +F K +S+ F P N ++ GF + G++ Y EM
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEV 418
Query: 242 GFRPSVVTY-----------NIR------------------------IDGYCKKGCFGDA 266
G PS VTY NI IDG+CK+ A
Sbjct: 419 GITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSA 478
Query: 267 MRLFEEMERVACLPS-----------------------------------LQTITTLIHG 291
L E+ P+ L+T T+LI G
Sbjct: 479 HELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDG 538
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ A + EM + + PD A+ +I+ L A +++++M K +
Sbjct: 539 LLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPS 598
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ Y+T+ G K L+ +L+D M++ VP T +L+
Sbjct: 599 VLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642
>gi|357462023|ref|XP_003601293.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
gi|355490341|gb|AES71544.1| Pentatricopeptide repeat-containing protein, partial [Medicago
truncatula]
Length = 317
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 134/260 (51%), Gaps = 23/260 (8%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
Q TPL LV+N+L RL+ ++G KAL+FFK +HP + + +FE + I AR+R +
Sbjct: 63 QWTPL---LVDNILKRLW---NHGPKALQFFKHLDRHPTYIHSISSFEHAVDIAARLREY 116
Query: 120 DQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ AW LM ++ R P T K+ +I+ R + + ++ +F+ + + G
Sbjct: 117 NTAWALMGRMRALRLGP---TPKTFAILAERYATGGKAHKAVK--------VFLSMHEHG 165
Query: 178 SEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
+ FN +L C K ++ A ++F L RF ++ + NI+ G+
Sbjct: 166 CHQDLNSFNTILDVLCKTKRVEMANNLFKTLRGRFKCDSVSYNIMANGWCLIKRTPMALQ 225
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
EMV RG P++VTYN + GY + G +A F EM++ C + T TT++HG G
Sbjct: 226 VLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFG 285
Query: 294 LVRNIHQARQLFDEMPKRNL 313
+ + +++++FD M K L
Sbjct: 286 VAGEVKRSKRVFDAMVKEGL 305
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 83/189 (43%), Gaps = 6/189 (3%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P KT IL + G + M G + ++N +D CK A
Sbjct: 130 RLGPTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMA 189
Query: 267 MRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
LF+ + R C + + +G L++ A Q+ EM +R + P + YN ++
Sbjct: 190 NNLFKTLRGRFKC--DSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLK 247
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKF- 383
RC LN A E EM++++ D VTY TM G + ++ +++D M+ EG F
Sbjct: 248 GYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEGLFL 307
Query: 384 -VPKTRTVV 391
VP + V+
Sbjct: 308 RVPSSDLVI 316
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/193 (21%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 240 LRGFR--PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+R R P+ T+ I + Y G A+++F M C L + T++ +
Sbjct: 126 MRALRLGPTPKTFAILAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKR 185
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF + R K D +YN M + + A++++ EM E+ + VTY+T
Sbjct: 186 VEMANNLFKTLRGR-FKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNT 244
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G + L + + M + K T ++ F V V ++ ++ G
Sbjct: 245 LLKGYFRCGQLNEAWEFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVKEG 304
Query: 418 FCPHGHALDLLVT 430
+ DL++T
Sbjct: 305 LFLRVPSSDLVIT 317
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 43/223 (19%), Positives = 93/223 (41%), Gaps = 7/223 (3%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A++ F+ ++R + +I++ H A +R + A L M L P +
Sbjct: 83 ALQFFKHLDRHPTY--IHSISSFEHAVDIAARLREYNTAWALMGRMRALRLGPTPKTFAI 140
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ + A+++ M E D +++T+ L K+ +E L+ + + G+
Sbjct: 141 LAERYATGGKAHKAVKVFLSMHEHGCHQDLNSFNTILDVLCKTKRVEMANNLF-KTLRGR 199
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F + + ++ +C+ R + L + +++RG P + L+ G G+ EA+
Sbjct: 200 FKCDSVSYNIMANGWCLIKRTPMALQVLKEMVERGVDPTMVTYNTLLKGYFRCGQLNEAW 259
Query: 443 ECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +M R+ ++ +Y M+ + V D M+K
Sbjct: 260 EFFLEMKKRKCEIDVVTYTTMVHGFGVAGEVKRSKRVFDAMVK 302
>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
Length = 671
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 125/263 (47%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++L+ +FC + A SV K+L P+ T L+ G G + + +M+
Sbjct: 99 LHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMI 158
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GFRP VVTY I+G CK G A+RL M + C P++ T+I R +
Sbjct: 159 GEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVT 218
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM + + PDI YN++I +L + L++EM + +I D V+++T+
Sbjct: 219 EAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVV 278
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + + D+MI+ P T LM C+ +D + ++ ++ +G
Sbjct: 279 DALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCM 338
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P+ + + L+ G C R ++A
Sbjct: 339 PNVISYNTLINGYCKIQRIDKAI 361
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 86/338 (25%), Positives = 148/338 (43%), Gaps = 11/338 (3%)
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
S+ F + + + +F+RM R + +FN LL + K S+ ++ S
Sbjct: 34 SKSLHFNTIDGAISSFNRMLRMQ----PPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89
Query: 207 -RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
PN T++IL+ F V +++ G +P T+ I G C +G G+
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGE 149
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ LF++M P + T TLI+G V N A +L M ++N +P++ AYN +I
Sbjct: 150 ALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIID 209
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
SL + R + A L EM K I D TY+++ L + V L + M++ K +P
Sbjct: 210 SLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMP 269
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
+ ++ C +V ++ +I RG P+ L+ G C +EA +
Sbjct: 270 DVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVF 329
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
M+ + + SY L N K++ +D+ I
Sbjct: 330 DTMVCKGCMPNVISYNTL------INGYCKIQRIDKAI 361
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 92/427 (21%), Positives = 170/427 (39%), Gaps = 66/427 (15%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSYEE 157
P+ F K L +A+M++ L SH + P++ TL + I+ F
Sbjct: 59 PSTVDFNKLLTSIAKMKHHSTLLSL-SHQMDSFGIPPNIYTLHIL------INSFCHLNR 111
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
AF + + + +G + + F L++ C + ++ EA +F K++ F P+ T
Sbjct: 112 VGFAFSVLAKILKLG-HQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYG 170
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + G+ +A MV + +P+V YN ID CK +A LF EM
Sbjct: 171 TLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTK 230
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T +LIH + L +EM + PD+ ++N ++ +L + + A
Sbjct: 231 GISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEA 290
Query: 337 MELMDEMEEKRIGHDNVTYHTMF---------------FGLMKSSG-----------LEG 370
+++D+M ++ + + VTY + F M G + G
Sbjct: 291 HDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLING 350
Query: 371 VCKL----------------------------YDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
CK+ +D M+ +P + L+ +C R
Sbjct: 351 YCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQR 410
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+D + L+G + + P L+ GLC R ++A +M+ + + +YR+
Sbjct: 411 IDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRI 470
Query: 463 LQRYLVQ 469
L YL +
Sbjct: 471 LLDYLCK 477
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 165/405 (40%), Gaps = 33/405 (8%)
Query: 102 TPDAF--EKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+PD F +H L + + L++ + + P +++ ++ L + K
Sbjct: 233 SPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT---- 288
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
EA D +++ I G+ + L+ C EM EA VF ++ + PN + N
Sbjct: 289 --EAHDVVDKMIQRGVEP-NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYN 345
Query: 217 ILLLGFKESGDVT--------------------AMEMFYHEMVLRGFRPSVVTYNIRIDG 256
L+ G+ + + A+++F MV +G P+V++YN I+G
Sbjct: 346 TLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVF-DTMVCKGCMPNVISYNTLING 404
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YCK AM LF EM R +P T +TLIHG V + A LF EM + P+
Sbjct: 405 YCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPN 464
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ Y ++ L + R L AM L+ +E + D + G+ ++ LE L+
Sbjct: 465 LVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFS 524
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+ P T +++ C +D L+ + + G +G + + G
Sbjct: 525 NLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNN 584
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
A + ++M+ R ++ + + L ++ L+ + R
Sbjct: 585 ETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILR 629
>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 772
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 159 LEAFDRMEREIFVGIRKFGS-EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMN 216
+EAFD +E V R F + +N L+ C ++ R F +L S+F P+ + N
Sbjct: 302 VEAFDLVEE--MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G+ +G ++ + + E+ R P+V+TYN I G C G A+RL +EM
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T T L++G + + AR F+EM + LKPD AYN I ++ D + A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ +EM D +TY+ L + E C L + M+ +P T ++
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCP---------HGHA----LDL---------------- 427
F N + ++ ++ +G P H HA LDL
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599
Query: 428 ------LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ GLC R +EA++ +M + ++ SY +L
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 173/423 (40%), Gaps = 23/423 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR------------TH 133
AL FF++ + P F + F L IL A+ +M V H
Sbjct: 102 ALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGH 161
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETL-----EAFDRMEREIFVGIRKFGSE----EFNVL 184
L + I + ++ L E + ++ + +FG + +N +
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L ++C + + +A + ++ R PN+ T N+L+ G + G++ + EM+ G
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
S TYN I+G+C+KG F +A L EEM P+L T TL++G + R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
F +M K PDI ++N+++ R ++ A L DE++ + + +TY+T+ GL
Sbjct: 342 RFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
L+ +L M + P T +L+ V + + ++ +G P
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRM 482
A + + G AF ++ML +Y + L Q N E + L+ M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 483 IKN 485
+ +
Sbjct: 522 VSD 524
>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 584
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 106/416 (25%), Positives = 181/416 (43%), Gaps = 22/416 (5%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFD-------QAWELMSHVQRTHPSLLTLKSM 142
FT Q PT ++ T+ R D Q + + ++TH K +
Sbjct: 13 ISFTTQP--LKPTSNSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEV 70
Query: 143 SIM--LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+M L+R + Y E+L + M + + ++ L++ F + + +A V
Sbjct: 71 HLMKLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTK----LIKGFFNSRNIGKATRV 126
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++L R+ P+ N L+ GF ++ + M RGF P VVTYNI I +C
Sbjct: 127 -MEILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCS 185
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G A+ +FEE+ + C P++ T T LI L I A +L DEM + L+PD
Sbjct: 186 RGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLT 245
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YNA+I + + ++ A EL+ + + D +TY+ + L+ KL MI
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P T +L+ C + +V+ +NL + ++G P + D L+ G C GR +
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMIKNLQAVLPPPT 494
A E + M+ +Y + L + A++ LE + + L V PP
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALE----VFEKLDEVGCPPN 417
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 129/286 (45%), Gaps = 2/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL+ ++ + E + +++S PN T +IL+ G V M
Sbjct: 281 YNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMK 340
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P Y+ I G+C++G A E M CLP + T++ G
Sbjct: 341 EKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKAD 400
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA ++F+++ + P++ +YN + S+L D A+E++ ++ + I D +TY+++
Sbjct: 401 QALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLI 460
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + ++ +L M G++ P + +++ C R + + + + ++G
Sbjct: 461 SCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQ 520
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ LL+ G+ G EA E + L +SE S+ L +
Sbjct: 521 PNETTYILLIEGIGFSGLRAEAMELANS-LHGMNAISEDSFNRLNK 565
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 170/432 (39%), Gaps = 45/432 (10%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSIMLS 147
+F + +TP K + R +A +M ++R P + ++ +S
Sbjct: 90 YFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYGKPDVFAYNAL---IS 146
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-S 206
K E DRM+ F+ +N+++ +FC++ ++ A +F +LL
Sbjct: 147 GFIKANQLENANRVLDRMKSRGFLP----DVVTYNIMIGSFCSRGKLDLALEIFEELLKD 202
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK------- 259
P T IL+ G + EM+ +G P +TYN I G CK
Sbjct: 203 NCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMMVDKA 262
Query: 260 ---------KGC-------------------FGDAMRLFEEMERVACLPSLQTITTLIHG 291
+GC + + +L EM + C P++ T + LI
Sbjct: 263 FELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPNVVTHSILIGT 322
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ +A L M ++ LKPD Y+ +I+ R L+ A E ++ M D
Sbjct: 323 LCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLEYMISDGCLPD 382
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
V Y+T+ GL ++ + ++++++ E P + L + L +
Sbjct: 383 IVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMIL 442
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
L+++G P + L++ LC G +EA E M R + + SY ++ L + N
Sbjct: 443 KLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVN 502
Query: 472 -ANEKLEDLDRM 482
AN+ +E L M
Sbjct: 503 RANDAIEVLAAM 514
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 129/288 (44%), Gaps = 9/288 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + + +A + L SR P+ T NILL G + E EM+
Sbjct: 246 YNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMI 305
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P+VVT++I I C+ G +A+ L M+ P LI G +
Sbjct: 306 SIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLD 365
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + + M PDI YN +++ L R + A+E+ ++++E + +Y+T+F
Sbjct: 366 LATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLF 425
Query: 360 FGLMKSS----GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
L S LE + KL ++ I+ P T L+ C + VD + L +
Sbjct: 426 SALWSSGDRYRALEMILKLLNQGID----PDEITYNSLISCLCRDGMVDEAIELLVDMQS 481
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ P+ + ++++ GLC R +A E M + Q +E +Y +L
Sbjct: 482 GRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILL 529
>gi|147793827|emb|CAN62355.1| hypothetical protein VITISV_022418 [Vitis vinifera]
Length = 546
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 173/402 (43%), Gaps = 42/402 (10%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ---HPHFTPTPDAFEKTLHILARMRYFD 120
L+ LV +VL R S+ A FF + + ++P + L IL RMR F
Sbjct: 116 LTDDLVLDVLKR---HRSDWRPAYVFFNWASRCGXESGYSPGCGVHNEILDILGRMRRFH 172
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE- 179
+ +L + + L ++ ++L+R + EE ++ IF + G E
Sbjct: 173 EMTQLFDEMSK-RKGLXNERTFGVLLNRYAAAHKTEEAVK--------IFYKRKGLGFEL 223
Query: 180 ---EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
F LL + C K ++ A +F + F P+ K+MN++L G+ G + + F++
Sbjct: 224 DLIAFQTLLMSLCRYKHVEMAEFLFHSKKNEFPPDIKSMNVILNGWCVLGSLREAKRFWN 283
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+++ +P TY I I+ K G A++LF+ M C P + +I +
Sbjct: 284 DIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPDVAICNCIIDALCFKK 343
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I +A ++ EM +R+ +PD+ YN++I L + + EL+D+ME+K + TY
Sbjct: 344 RIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYELLDDMEQKGCLPNARTYG 403
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID- 415
+ K + G+ + +R M C N + L ++ WGY +
Sbjct: 404 YLLKSTKKPEEVPGILERMERN------------GCRMNSDCYNLILKLYMD-WGYELKL 450
Query: 416 ---------RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P +++ GL +GR ++A KQM
Sbjct: 451 RSTLDEMERNGMGPDQRTYTIMIHGLYDKGRMDDALSYFKQM 492
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 47/238 (19%), Positives = 101/238 (42%), Gaps = 1/238 (0%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G+ P +N +D + F + +LF+EM + L + +T L++ +A
Sbjct: 150 GYSPGCGVHNEILDILGRMRRFHEMTQLFDEMSKRKGLXNERTFGVLLNRYAAAHKTEEA 209
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++F + + D+ A+ ++ SL R + + A E + ++ D + + + G
Sbjct: 210 VKIFYKRKGLGFELDLIAFQTLLMSLCRYKHVEMA-EFLFHSKKNEFPPDIKSMNVILNG 268
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + ++ +I K P T + + ++ + L+ + ++G P
Sbjct: 269 WCVLGSLREAKRFWNDIITSKCKPDKFTYGIFINSLTKAGKLSTAVKLFQAMWEKGCNPD 328
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ LC + R EA E ++M R Q A+Y L ++L + EK+ +L
Sbjct: 329 VAICNCIIDALCFKKRIPEALEVLREMNERDCQPDVATYNSLIKHLCKIQRFEKVYEL 386
>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 141/288 (48%), Gaps = 4/288 (1%)
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
T EA D I GI ++ L+ C +KEA F ++ R + + T N
Sbjct: 162 TTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYN 220
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +G + F + MV RGF P T+ I IDG CK+G G+A ++ E M
Sbjct: 221 SLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHK 280
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T TL++G LV + A +LF+ + R +K ++ +YN +I+ + + ++ A
Sbjct: 281 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 340
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMK 395
L +EM K + VTY+T+ L +S + KL+ M G+F+ K T +L+
Sbjct: 341 FRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL-KLSTYCVLLD 399
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C N ++ ++L+ + P+ +L+ G+C G+ EEA++
Sbjct: 400 GLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 447
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 146/300 (48%), Gaps = 16/300 (5%)
Query: 102 TPDAFEKTLHI-----LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+PDAF T+ I ++ Q ELM H + P +LT ++ L + + +
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGK-EPDILTYNTLMNGLCLVGQLEDAT 306
Query: 157 ETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ E+ DR GI K +N+L+ +C +++ EA +F ++ + P+ T
Sbjct: 307 KLFESLADR-------GI-KLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVT 358
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ +SG V + + EM G + TY + +DG CK G +A+ LF+ ++
Sbjct: 359 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P+++ + L+ G + +A + FDE+ K L+PD AYN +I+ L L+
Sbjct: 419 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 478
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A++L+ +MEEK D++T++ + L+K + + +L + M F P ML+
Sbjct: 479 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 538
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 149/333 (44%), Gaps = 14/333 (4%)
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ ++ FD M E+ +F + +G +L+ C ++ A + K+ + T
Sbjct: 95 DAVQLFDEMTEKGLFGDAKTYG-----ILINGLCKARKTGLAIKLHEKMKGNCKGDVFTY 149
Query: 216 NILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+++ + G T A++MF EM+ G P VV Y+ +DG C+ G +A+ F+EME
Sbjct: 150 GMIIDSLCKDGMTTEALDMF-SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEME 208
Query: 275 RVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ T +LIHG AGL + + L M R PD + +I L +
Sbjct: 209 GRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL---MVDRGFSPDAFTFTILIDGLCKEG 265
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A ++++ M K D +TY+T+ GL LE KL++ + + +
Sbjct: 266 KVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYN 325
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+L+ +C + ++D L+ + +G P + L+ LC GR A + +M
Sbjct: 326 ILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTC 385
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+ + ++Y +L L + E+ DL + IK
Sbjct: 386 GQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIK 418
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 121/257 (47%), Gaps = 3/257 (1%)
Query: 208 FAPNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
F P+ T+ L+ G + E+G A+++F EM +G TY I I+G CK G A
Sbjct: 73 FEPDAVTVTTLVKGVWMENGIPDAVQLF-DEMTEKGLFGDAKTYGILINGLCKARKTGLA 131
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
++L E+M + C + T +I +A +F EM + PD+ Y++++
Sbjct: 132 IKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L R L A+E EME + I D TY+++ GL ++ + V + M++ F P
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +L+ C +V + + +G P + L+ GLC G+ E+A + +
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310
Query: 447 QMLVRRRQVSEASYRML 463
+ R +++ SY +L
Sbjct: 311 SLADRGIKLNVFSYNIL 327
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 120/284 (42%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ C + ++ EA+ + + + P+ T N L+ G G + + +
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 313
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG + +V +YNI I+GYCK +A RLFEEM PS T TLI +
Sbjct: 314 DRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 373
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF EM + Y ++ L + L A++L +++ + + +
Sbjct: 374 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILL 433
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ ++ LE K +D + + P T +L+ C + + L + ++G
Sbjct: 434 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 493
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++++ L EA + ++M R EA ML
Sbjct: 494 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 537
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 39/242 (16%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P T+TTL+ G + I A QLFDEM ++ L D Y +I+ L + R A++L
Sbjct: 75 PDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIKL 134
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
++M+ G D TY + L K ++ MI +P LM C
Sbjct: 135 HEKMKGNCKG-DVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCR 193
Query: 400 NFRVDLGL----------------------------NLW-------GYLIDRGFCPHGHA 424
R+ L LW ++DRGF P
Sbjct: 194 FGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFT 253
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+L+ GLC G+ EA + + M + ++ +Y L L +LED ++ +
Sbjct: 254 FTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVG---QLEDATKLFE 310
Query: 485 NL 486
+L
Sbjct: 311 SL 312
>gi|410109941|gb|AFV61050.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rhodocnemis]
Length = 428
Score = 119 bits (298), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 88 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 144
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + + E R
Sbjct: 145 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGHLDEGFRL 196
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 197 KSAMLASGVLPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLIPNGVTFTTLIDGHC 255
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++ M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 256 KNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 315
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 316 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEGRSVDAEKMLREM 375
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 376 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 428
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 126 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 185
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M + PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 186 RLGHLDEGFRLKSAMLASGVLPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 245
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y RM+ +P T L+ C + +L +
Sbjct: 246 TFTTLIDGHCKNGRVDFAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 305
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 306 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYAALISGLCQEG-- 363
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 364 -RSVDAEKMLREMLSVGLKPDT 384
>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
Length = 1512
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 4/288 (1%)
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
T EA D I GI ++ L+ C +KEA F ++ R + + T N
Sbjct: 1101 TTEALDMFSEMIGAGILP-DVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYN 1159
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +G + F + MV RGF P T+ I IDG CK+G G+A ++ E M
Sbjct: 1160 SLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHK 1219
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T TL++G LV + A +LF+ + R +K ++ +YN +I+ + + ++ A
Sbjct: 1220 GKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEA 1279
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMK 395
+EM K + VTY+T+ L +S + KL+ M G+F+ K T +L+
Sbjct: 1280 FRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFL-KLSTYCVLLD 1338
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
C N ++ ++L+ + P+ +L+ G+C G+ EEA++
Sbjct: 1339 GLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWK 1386
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/300 (27%), Positives = 145/300 (48%), Gaps = 16/300 (5%)
Query: 102 TPDAFEKTLHI-----LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+PDAF T+ I ++ Q ELM H + P +LT ++ L + + +
Sbjct: 1187 SPDAFTFTILIDGLCKEGKVGEAQQILELMRH-KGKEPDILTYNTLMNGLCLVGQLEDAT 1245
Query: 157 ETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ E+ DR GI K +N+L+ +C +++ EA F ++ + P+ T
Sbjct: 1246 KLFESLADR-------GI-KLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVT 1297
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ +SG V + + EM G + TY + +DG CK G +AM LF+ ++
Sbjct: 1298 YNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIK 1357
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P+++ + L+ G + +A + FDE+ K L+PD AYN +I+ L L+
Sbjct: 1358 KTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLS 1417
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A++L+ +MEEK D++T++ + L+K + + +L + M F P ML+
Sbjct: 1418 EAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSMLL 1477
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 149/335 (44%), Gaps = 12/335 (3%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMN 216
+ ++ FD M ++ +G ++ + +L+ C ++ A + K+ + T
Sbjct: 1034 DAVQLFDEMTKKGLLG----DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYG 1089
Query: 217 ILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+++ + G T A++MF EM+ G P VV Y+ +DG C+ G +A+ F+EME
Sbjct: 1090 MIIDALCKDGMTTEALDMF-SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEG 1148
Query: 276 VACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ T +LIHG AGL + + L M R PD + +I L +
Sbjct: 1149 RGISADVYTYNSLIHGLSRAGLWKEVTWFLNL---MVDRGFSPDAFTFTILIDGLCKEGK 1205
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A ++++ M K D +TY+T+ GL LE KL++ + + + +
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ +C + ++D + + +G P + L+ LC GR A + +M
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
+ + ++Y +L L + E+ DL + IK +
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTE 1360
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 119/284 (41%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ C + ++ EA+ + + + P+ T N L+ G G + + +
Sbjct: 1193 FTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLA 1252
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG + +V +YNI I+GYCK +A R FEEM PS T TLI +
Sbjct: 1253 DRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVR 1312
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF EM + Y ++ L + L AM+L +++ + + +
Sbjct: 1313 TAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILL 1372
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ ++ LE K +D + + P T +L+ C + + L + ++G
Sbjct: 1373 DGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCL 1432
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++++ L EA + ++M R EA ML
Sbjct: 1433 PDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/376 (21%), Positives = 156/376 (41%), Gaps = 15/376 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P D F L +A++ Y+ + + + P L TL +I++ ++
Sbjct: 944 PCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTL---NILIHCCCSLRAVGCG 1000
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
F + R F + V L++ + + +A +F ++ + + KT
Sbjct: 1001 FGVFGGFLK------RGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTY 1054
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
IL+ G ++ T + + HE + + V TY + ID CK G +A+ +F EM
Sbjct: 1055 GILINGLCKARK-TGLAIKLHEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIG 1113
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
LP + ++L+ G + +A + F EM R + D+ YN++I L R
Sbjct: 1114 AGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKE 1173
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
++ M ++ D T+ + GL K + ++ + M P T LM
Sbjct: 1174 VTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMN 1233
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C+ +++ L+ L DRG + + ++L+ G C + +EAF ++M + +
Sbjct: 1234 GLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKP 1293
Query: 456 SEASYRMLQRYLVQAN 471
S +Y L L Q+
Sbjct: 1294 STVTYNTLIGALCQSG 1309
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 120/318 (37%), Gaps = 39/318 (12%)
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L S P T N LL + G + + Y ++ G +P + T NI I C
Sbjct: 938 LCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAV 997
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
G +F + P T+TTL+ G + I A QLFDEM K+ L D Y +
Sbjct: 998 GCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGIL 1057
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ L + R A++L ++M+ G D TY + L K ++ MI
Sbjct: 1058 INGLCKARKTGLAIKLHEKMKGNCKG-DVFTYGMIIDALCKDGMTTEALDMFSEMIGAGI 1116
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGL----------------------------NLW----- 410
+P LM C R+ L LW
Sbjct: 1117 LPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTW 1176
Query: 411 --GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
++DRGF P +L+ GLC G+ EA + + M + ++ +Y L L
Sbjct: 1177 FLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLC 1236
Query: 469 QANANEKLEDLDRMIKNL 486
+LED ++ ++L
Sbjct: 1237 LVG---QLEDATKLFESL 1251
>gi|125526118|gb|EAY74232.1| hypothetical protein OsI_02112 [Oryza sativa Indica Group]
Length = 556
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 159/370 (42%), Gaps = 18/370 (4%)
Query: 109 TLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM--- 165
+ +LA F AW L+ T P L + + ++ R ++ L AF +
Sbjct: 76 AVSLLASRGLFAAAWRLLLAPSPTPPPL---AAFAPLVRRYARLGRAPAALRAFQFLRRH 132
Query: 166 -EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-------APNNKTMNI 217
+R + G + N+ + A C + + A V+L R+ P+ + NI
Sbjct: 133 PDRYMAGGDIPAAASLLNMAVDALCKEGHPRAA----VELFERWRREEPDSPPDERAYNI 188
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
LL G+ +G + + + EM L G RP+VVTY I+G C K A+ L +EM
Sbjct: 189 LLHGWSRAGRLDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEG 248
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+L T +++ A ++ ++ P + P+I +N+++ + DL A
Sbjct: 249 IEANLLTCNPIVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGAS 308
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ M E+ I TY+ F K+S +E Y +MI + P T V+L+K
Sbjct: 309 SVLKVMTERGISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKML 368
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
R++L + + + GF P +L+ LC R ++EEA + M R
Sbjct: 369 SRANRLELVVQMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQY 428
Query: 458 ASYRMLQRYL 467
+Y+ L R L
Sbjct: 429 ITYQKLMREL 438
>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
Length = 1245
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 134/286 (46%), Gaps = 1/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C + + + ++SR PN T N+LL F + G + Y EM+
Sbjct: 256 YNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMI 315
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+++TYN +DGYC + +A + + M R C P + T T+LI G +V+ +
Sbjct: 316 TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVD 375
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++F + KR L + Y+ ++ + + A EL EM + D +TY +
Sbjct: 376 DGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILL 435
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + LE ++++ + + K +++ C +V+ NL+ L +G
Sbjct: 436 DGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVK 495
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ ++++GLC +G EA ++M ++ +Y L R
Sbjct: 496 PNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIR 541
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 4/308 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L++ + ++ EA + +++ P+ T N ++ G SGD + +M
Sbjct: 151 FNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKME 210
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R + V TY+ ID C+ GC A+ LF+EME S+ T +L+ G +
Sbjct: 211 ERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWN 270
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
L +M R + P++ +N ++ ++ L A EL EM + I + +TY+T+
Sbjct: 271 DGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLM 330
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + L + D M+ K P T L+K +C+ RVD G+ ++ + RG
Sbjct: 331 DGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLV 390
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ +LV G C G+ + A E ++M+ +Y +L L N KLE
Sbjct: 391 ANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCD---NGKLEKA 447
Query: 480 DRMIKNLQ 487
+ ++LQ
Sbjct: 448 LEIFEDLQ 455
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L++ +C K + + VF + R N T +IL+ GF +SG + E + EMV
Sbjct: 361 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 420
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TY I +DG C G A+ +FE++++ + TT+I G +
Sbjct: 421 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 480
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP++ Y MIS L + L+ A L+ +MEE ++ TY+T+
Sbjct: 481 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 540
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ L KL + M F ++ M++
Sbjct: 541 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 578
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 12/264 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++FN++L FC Q E L+ A N T+NI++ F +
Sbjct: 91 TKQFNLVLD-FCKQLE-----------LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 138
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
++ G+ P T+N I G +G +A+ L + M C P + T ++++G +
Sbjct: 139 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 198
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L +M +RN+K D+ Y+ +I SL R ++AA+ L EME K I VTY++
Sbjct: 199 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 258
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ L M+ + VP T +L+ F ++ L+ +I RG
Sbjct: 259 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 318
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ + L+ G C + R EA
Sbjct: 319 ISPNIITYNTLMDGYCMQNRLSEA 342
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
F ++ L G ++ T NI I+ +C+ K CF A + ++ ++ P T TLI G
Sbjct: 100 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKG 157
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + +A L D M + +PD+ YN++++ + R D + A++L+ +MEE+ + D
Sbjct: 158 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 217
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY T+ L + ++ L+ M T L++ C + + G L
Sbjct: 218 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 277
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQA 470
++ R P+ ++L+ G+ +EA E K+M+ R + +Y ++ Y +Q
Sbjct: 278 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 337
Query: 471 NANEKLEDLDRMIKN 485
+E LD M++N
Sbjct: 338 RLSEANNMLDLMVRN 352
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++F I K G + +++L+Q FC ++K A +F +++S P+ T ILL G
Sbjct: 379 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 438
Query: 223 KESGDV-TAMEMF----------------------------------YHEMVLRGFRPSV 247
++G + A+E+F + + +G +P+V
Sbjct: 439 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 498
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+TY + I G CKKG +A L +ME P+ T TLI ++ + +L +E
Sbjct: 499 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 558
Query: 308 MPKRNLKPDIGAYNAMISSLI 328
M D + +I L+
Sbjct: 559 MKSCGFSADASSIKMVIDMLL 579
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF+EM R LPSL + + + ++ + +I N MI
Sbjct: 61 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 120
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RC A ++ ++ + D T++T+ GL + L DRM+E
Sbjct: 121 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 180
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C + L L+L + +R ++ LC G + A
Sbjct: 181 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 240
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M + + S +Y L R L +A
Sbjct: 241 FKEMETKGIKSSVVTYNSLVRGLCKA 266
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 27/46 (58%)
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
V E + EM+ RG P+ +TY+ IDG+CK+ +A ++ + M
Sbjct: 715 VVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLM 760
>gi|297736961|emb|CBI26162.3| unnamed protein product [Vitis vinifera]
Length = 636
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 175/400 (43%), Gaps = 19/400 (4%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM---SIMLSR 148
L +F P P + E + L + ++A + ++ S+ T S+ S+ R
Sbjct: 183 LDSTNFNPKPASLEAYIRCLCKGGLVEEAISVFGQLKGIGVCASIATWNSVLRGSVRAGR 242
Query: 149 IS-KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-S 206
I ++ Y E +E+ + + G L+QAFC + + + ++ ++L
Sbjct: 243 IDFVWELYGEMVES------SVVADVHTVG-----YLVQAFCDENRISDGHNLLRRVLED 291
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
P N N L+ GF + + H M+ R P + TY ++G CK G +
Sbjct: 292 GVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAPDIFTYQEVVNGLCKGGKGPEG 351
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
R+F++++ P TT+IHG ++ + AR+L+ EM ++ P+ YNAMI
Sbjct: 352 FRVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKLWFEMIQKGFLPNEYTYNAMIHG 411
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ +L A ++ EM +K G V+Y+ M GL ++ L++ M +
Sbjct: 412 YFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCSHGKIKEAHDLFEEMSHKGILRN 471
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L++ FC ++ G NL L+D+G P + L+ LC G + A
Sbjct: 472 HITYNALVRGFCKEGKIVEGANLLYELLDQGIQPSAASYAPLIDKLCQEGDMQNAKILWD 531
Query: 447 QMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
M R + + ++ M+ + Q A E +E L M+++
Sbjct: 532 DMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWLTTMLRS 571
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/237 (21%), Positives = 106/237 (44%), Gaps = 6/237 (2%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
F + F P + +H ++ ++AW++ + T+ S ++M+ +
Sbjct: 391 FEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTV-SYNVMIKGLCS 449
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
+E + F+ M + GI + +N L++ FC + ++ E ++ +LL + P
Sbjct: 450 HGKIKEAHDLFEEMSHK---GILR-NHITYNALVRGFCKEGKIVEGANLLYELLDQGIQP 505
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ + L+ + GD+ ++ + +M RG P+V T++ I G+CK+GC + M
Sbjct: 506 SAASYAPLIDKLCQEGDMQNAKILWDDMQNRGMEPAVCTHDFMITGFCKQGCAMEGMEWL 565
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
M R P ++ +LI + + A + D M K + I N++++ L
Sbjct: 566 TTMLRSKLRPQKKSFESLIQCLSQIDRLDDALLVLDSMLKIGFRLSISICNSLVTKL 622
Score = 64.7 bits (156), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/310 (19%), Positives = 119/310 (38%), Gaps = 40/310 (12%)
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
S F+P++ + N+L E+G A + F F P + I CK G +
Sbjct: 154 SGFSPDSSSCNVLFDALVEAGACNAAKSFLDST---NFNPKPASLEAYIRCLCKGGLVEE 210
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI-------- 317
A+ +F +++ + S+ T +++ G+ I +L+ EM + ++ D+
Sbjct: 211 AISVFGQLKGIGVCASIATWNSVLRGSVRAGRIDFVWELYGEMVESSVVADVHTVGYLVQ 270
Query: 318 ---------------------------GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
A+N +IS + + +L+ M +
Sbjct: 271 AFCDENRISDGHNLLRRVLEDGVVPRNAAFNKLISGFCKDKAYGRVSDLLHSMIARNRAP 330
Query: 351 DNVTYHTMFFGLMKSS-GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D TY + GL K G EG +++ + + + P ++ C + L
Sbjct: 331 DIFTYQEVVNGLCKGGKGPEGF-RVFKDLKDRGYAPDRVMYTTMIHGLCRMKWLGDARKL 389
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
W +I +GF P+ + + ++ G G EEA++ ++M + SY ++ + L
Sbjct: 390 WFEMIQKGFLPNEYTYNAMIHGYFKIGNLEEAWKMYREMCDKGYGEKTVSYNVMIKGLCS 449
Query: 470 ANANEKLEDL 479
++ DL
Sbjct: 450 HGKIKEAHDL 459
>gi|90399282|emb|CAH68243.1| H0306F03.10 [Oryza sativa Indica Group]
gi|125549952|gb|EAY95774.1| hypothetical protein OsI_17648 [Oryza sativa Indica Group]
Length = 442
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 184/396 (46%), Gaps = 17/396 (4%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYF 119
+PL +T V L L+A ++ +ALEFF ++ + PTP + + +L + F
Sbjct: 29 SPLDATAVLETLS-LYA--NDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEF 85
Query: 120 DQAWELM-SH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
A L+ SH R PS L ++ +L+R++ ++ + AFD I G+R
Sbjct: 86 PLATSLLVSHHDPGRADPSFLR-PALRSLLNRLAAANLIDDAIRAFDSTAGSI--GLRDE 142
Query: 177 GSEEFNVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
S F+ L+ A C + + EA + F K F P KT N+LL G+ ++ + +
Sbjct: 143 AS--FHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLW 200
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M RG + +Y+I +D K G A ++F+EM++ + T IH GL
Sbjct: 201 FDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLA 260
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + A +L+ +M KP+ +N ++ L + + +M + I + +TY
Sbjct: 261 QGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTY 320
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
H F L + + V L+++M+E P+ T VML+K F + +W + +
Sbjct: 321 HCFFQYLSRP---QEVLGLFEKMLERGCWPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEE 377
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+G P A + L+ L +G + A + ++ML +
Sbjct: 378 QGLSPDAFAYNSLIDALLQKGMVDLARKYDEEMLSK 413
>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 566
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/359 (26%), Positives = 167/359 (46%), Gaps = 8/359 (2%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F + L+ ++ + S + ++++ + QS ++ F+ M FV GS
Sbjct: 74 FFTSSSLLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVP----GS 129
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN LL + S F + S+ + + IL+ G E+G++ E+
Sbjct: 130 NCFNYLLTFVVGSSSFNQWWSFFNENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIEL 189
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
GF P+VV Y IDG CKKG A LF EM ++ + + +T T LI+G L +N
Sbjct: 190 TEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING--LFKNG 247
Query: 298 -IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
Q +++++M + + P++ YN +++ L + A ++ DEM E+ + + VTY+
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL + L K+ D+M P T L+ FC ++ L+L L R
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
G P ++LV+G C +G A + K+M R + S+ +Y +L +++ EK
Sbjct: 368 GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/426 (22%), Positives = 179/426 (42%), Gaps = 51/426 (11%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + F L + F+Q W + + +L + S I++ + E++
Sbjct: 125 FVPGSNCFNYLLTFVVGSSSFNQWWSFFN--ENKSKVVLDVYSFGILIKGCCEAGEIEKS 182
Query: 159 LEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
+ + + + +FG + L+ C + E+++A+ +F ++ N +
Sbjct: 183 FD--------LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234
Query: 214 TMNILLLG-FKESGDVTAMEMF----------------------------------YHEM 238
T +L+ G FK EM+ + EM
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG ++VTYN I G C++ +A ++ ++M+ P+L T TLI G V +
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L ++ R L P + YN ++S R D + A +++ EMEE+ I VTY +
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+S +E +L M E VP T +L+ FC+ +++ L+ ++++
Sbjct: 415 IDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNC 474
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ + ++ G C G A + K+M + + ASYR + L + +++ E
Sbjct: 475 EPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAER 534
Query: 479 L-DRMI 483
L ++MI
Sbjct: 535 LVEKMI 540
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 114/216 (52%), Gaps = 5/216 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC ++ +A S+ L SR +P+ T NIL+ GF GD + EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEME 400
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +PS VTY I ID + + A++L ME + +P + T + LIHG + ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMN 460
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYHT 357
+A +LF M ++N +P+ YN MI L C++ ++ A++L+ EMEEK + + +Y
Sbjct: 461 EASRLFKSMVEKNCEPNEVIYNTMI--LGYCKEGSSYRALKLLKEMEEKELAPNVASYRY 518
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
M L K + +L ++MI+ P T + ++
Sbjct: 519 MIEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554
>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 183/444 (41%), Gaps = 24/444 (5%)
Query: 53 TLLQHLPQT--TPLSS--TLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEK 108
+L+ L Q TP S+ L + V+ +HS +AL F + H P + F
Sbjct: 72 SLMLQLTQAHFTPCSTYTPLYDTVVNAYVHSHSTD-QALTFLHHMIHEGH-VPLSNTFNN 129
Query: 109 TLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE 168
L +L R YFD+AW + + ++ +L S IM+ + + + +E
Sbjct: 130 LLCLLIRSNYFDKAWWIFNELKS--KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE-- 185
Query: 169 IFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGF 222
+FG + L+ C + A+++F K+ +R PN T ++L+ GF
Sbjct: 186 ------EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKM-NRLGLVPNPHTYSVLMNGF 238
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ G Y M G P+ YN I YC G A ++F EM +
Sbjct: 239 FKQGLQREGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGV 298
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T LI G + +A +L ++ K L P+I YN +I+ R +++A+ L ++
Sbjct: 299 MTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQ 358
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
++ + VTY+T+ G K L G L M E P T +L+ F
Sbjct: 359 LKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNH 418
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR- 461
+ + + G P + +L+ GLC G +EA + K + Q + Y
Sbjct: 419 TEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNT 478
Query: 462 MLQRYLVQANANEKLEDLDRMIKN 485
M+ Y + ++ L L+ M+++
Sbjct: 479 MIHGYCKEGSSYRALRLLNEMVQS 502
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 139/326 (42%), Gaps = 5/326 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S++++ K E + ++ M+R V + +N L+ +C + +A V
Sbjct: 230 TYSVLMNGFFKQGLQREGFQMYENMKRSGIVP----NAYAYNCLISEYCNDGMVDKAFKV 285
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F ++ + A T NIL+ G H++ G P++VTYNI I+G+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
A+RLF +++ P+L T TLI G V N+ A L EM +R + P
Sbjct: 346 VRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + R A E+ ME+ + D TY + GL ++ KL+ +
Sbjct: 406 YTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLG 465
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P + ++ +C L L ++ G P+ + + LC +W+
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWK 525
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQR 465
EA QM+ + S + Y+M+ +
Sbjct: 526 EAELLLGQMINSGLKPSVSLYKMVHK 551
>gi|410109939|gb|AFV61049.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rehmannii]
Length = 420
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L ++RYF W + + +P+ +L +I
Sbjct: 80 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLRYFKLVWGFYEEILECGYPA--SLYFFNI 136
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ +F I K+G +N L+ + ++ E R
Sbjct: 137 LMHRFCK--------DGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 188
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 189 KSAMRASGVQPDVYTYSVLINGLCKESXMDDANELF-DEMLVKGLVPNXVTFTTLIDGHC 247
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M LP J T TL++G +++QA L DEM + LKPD
Sbjct: 248 KNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEMXXKGLKPDKF 307
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+AA E M ++ I D+V Y + GL + K+ M
Sbjct: 308 TYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSXDAEKMLREM 367
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 368 LSVGLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHVPXVVTYNVLMNG 420
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 118 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAPLVFDAITKWGLRPSVVSYNTLMNGYI 177
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 178 RLGDLDEGFRLKSAMRASGVQPDVYTYSVLINGLCKESXMDDANELFDEMLVKGLVPNXV 237
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C ++ L +
Sbjct: 238 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLLPDJITYNTLVYGLCKKGDLNQAHGLIDEM 297
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 298 XXKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 355
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 356 -RSXDAEKMLREMLSVGLKPDT 376
>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
Length = 1048
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 12/338 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F+ A+ L + + P L ++ + +L+ + + YE + +ME GI
Sbjct: 52 FEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKME---LYGISH-DL 106
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF---KESGDVTAMEMF 234
F +L+ FC + A SV K++ + P+ T LL GF GD ++ +
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
MV G+ P+VV YN IDG CK G A+ L EME+ + T TL+ G
Sbjct: 167 ---MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
A ++ +M KR++ PD+ + A+I ++ +L+ A EL EM + + +NVT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+++ GL L K +D M P T L+ FC VD G+ L+ +
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
GF + L+ G C G+ A + M+ RR
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ + K + LE F ME++ GIR + +N L+ +A + +
Sbjct: 715 VINGLCKNRDLNNALEVFYCMEKK---GIRA-DAVTYNTLISGLSNSGRWTDAARLLRDM 770
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN L+ F + G++ Y EM+ R P+V TYN I+G+C GC
Sbjct: 771 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 830
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA +F+ M C P + T TLI G + + +LF EM + L D YN +
Sbjct: 831 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 890
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + LN A ++ + M + + D VTY+ + L + +E + + + + +
Sbjct: 891 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 950
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T ++++ C ++ L+ L +G P A +++GLC +G EA +
Sbjct: 951 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 1010
Query: 444 CSKQM 448
++M
Sbjct: 1011 LCRRM 1015
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 16/377 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWEL---MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P+ F + L ++A+M FD L M ++ +H L S +I++ +
Sbjct: 602 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD----LYSFTILIHCFCRCSRLSL 657
Query: 158 TLEAFDRMEREIF-VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
L +M + F I GS LL FC +EA S+ + F PN
Sbjct: 658 ALALLGKMMKLGFRPSIVTLGS-----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 712
Query: 216 NILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N ++ G ++ D+ A+E+FY M +G R VTYN I G G + DA RL +M
Sbjct: 713 NTVINGLCKNRDLNNALEVFYC-MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 771
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P++ T LI N+ +AR L+ EM +R++ P++ YN++I+ L
Sbjct: 772 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 831
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A + D M K D VTY+T+ G KS +E KL+ M V T L+
Sbjct: 832 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 891
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C ++++ ++ ++D G P ++L+ LC+ G+ E+A + +
Sbjct: 892 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 951
Query: 455 VSEASYRMLQRYLVQAN 471
V +Y ++ + L + +
Sbjct: 952 VDIITYNIIIQGLCRTD 968
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 179/424 (42%), Gaps = 31/424 (7%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMR------YFDQAWEL--MSHVQRTHPSLL----TL 139
F + H P+ F + L A +R YF Q EL +SH + L+
Sbjct: 60 FEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRC 119
Query: 140 KSMSIMLSRISKFQ--SYEETLEAFDRMER------------EIFVGIRKFGSEE----F 181
+S LS + K YE ++ F + + + + K G E +
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ C E+ A + ++ + + T N LL G SG + +M+
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R P VVT+ ID + K+G +A L++EM + + P+ T ++I+G + ++
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A++ FD M + P++ YN +IS + R ++ M+L M + D TY+T+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G + L ++ M+ + P T +L+ CVN ++ L + + +
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
A ++++ GLC + E+A+E ++ V + +Y ++ L + + ++L
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 481 RMIK 484
R +K
Sbjct: 480 RRMK 483
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 105/253 (41%), Gaps = 12/253 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
P F + + + D+A EL + ++ P+ +T S+ L + ++
Sbjct: 243 NPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKK 302
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTM 215
T FD M + F + +N L+ FC + + E +F ++ F + T
Sbjct: 303 T---FDLMASKGCFPNV-----VTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTY 354
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G+ + G + + MV R P ++T+ I + G C G A+ F++M
Sbjct: 355 NTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRE 414
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ +IHG + +A +LF +P +KPD Y MI L +
Sbjct: 415 SEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRRE 474
Query: 336 AMELMDEMEEKRI 348
A EL+ M+E+ I
Sbjct: 475 ADELIRRMKEEGI 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F DA LF EM LPS+ T L+ +R +M + D+ ++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I RC L+ A+ ++ +M + VT+ ++ G + + L M++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P L+ C N +++ L L + +G + L+TGLC GRW +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 443 ECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ M+ R ++ ++ ++ Q N +E E MI++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 150/364 (41%), Gaps = 28/364 (7%)
Query: 105 AFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
A+ +H L + ++AWEL V+ P ++ +IM+ + K E E
Sbjct: 423 AYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA---RTYTIMILGLCKNGPRREADELI 479
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGF 222
RM+ E GI + E + L + + KE+ S+ ++ + + +N L+
Sbjct: 480 RRMKEE---GIICQMNAEDDHLEEHSSSNKEI----SLSLREIWERSKSNPFWMQRLIPI 532
Query: 223 KESGDVTAMEMFYHEMVLRGFRP--------SVVTYN------IRIDGYCKKGCFGDAMR 268
S V ++ ++ RG P S +++ +R + +C K F DA
Sbjct: 533 AFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRERLRNELHCIK--FDDAFS 590
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF EM + +PS+ T ++ + L+ +M + D+ ++ +I
Sbjct: 591 LFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTILIHCFC 650
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
RC L+ A+ L+ +M + VT ++ G + + + L D M FVP
Sbjct: 651 RCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVV 710
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ C N ++ L ++ + +G + L++GL + GRW +A + M
Sbjct: 711 IYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDM 770
Query: 449 LVRR 452
+ R+
Sbjct: 771 VKRK 774
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL C ++++A + L S + T NI++ G + + + +
Sbjct: 922 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 981
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+G +P + Y I G C+KG +A +L M+ +PS
Sbjct: 982 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 1023
>gi|413938248|gb|AFW72799.1| hypothetical protein ZEAMMB73_717335 [Zea mays]
Length = 501
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 172/387 (44%), Gaps = 22/387 (5%)
Query: 67 TLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTP--TPDAFEKTLHILARMRYFDQAWE 124
T V N + +L H+ +AL FF L+ P + +P + L + AR+R+ Q
Sbjct: 66 TPVANAVIKLLWHHAP--RALLFFHALLRLPERSRDLSPCTVDLALDLAARLRHPRQLTS 123
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI-RKFGSEE--- 180
+ + H T ++ I+ R + + + +F+ + R G +
Sbjct: 124 SILALFPRHGLAFTPRTFPILFERFAMSHRRPD-------LAIRLFLSLHRSHGIAQDLP 176
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN LL A + +A S+ L RF P+ T N L G+ D + +MV
Sbjct: 177 LFNSLLDALVKSRRASKAASLVRALEQRFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 236
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-----CLPSLQTITTLIHGAGL 294
G P+ TYNI + G+ + G A F +M+R C P + + TT++HG G+
Sbjct: 237 ESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGV 296
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +AR++FDEM KP YNA+I + +L A+ + D+M K + VT
Sbjct: 297 AGQLDKARKVFDEMSIEGCKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVVT 356
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + GL + + KL DRM P +T +L+++ ++ GL+L+ +
Sbjct: 357 YTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETMS 416
Query: 415 DRGFC-PHGHALDLLVTGLCSRGRWEE 440
C P+ +++++ + R R E+
Sbjct: 417 KGEECLPNQDTYNIIISAMFVRKRAED 443
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 107/248 (43%), Gaps = 8/248 (3%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
+N +D K A L +E+ P T TL G V++ +A + +M
Sbjct: 178 FNSLLDALVKSRRASKAASLVRALEQ-RFPPDAVTYNTLADGWCRVKDTSRALDILRQMV 236
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN-----VTYHTMFFGLMK 364
+ + P YN ++ R L A + +M+ + +N V+Y T+ GL
Sbjct: 237 ESGIAPTKATYNIILKGFFRSGQLQHAWDFFLQMKRRGSNDENCKPDVVSYTTVLHGLGV 296
Query: 365 SSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ L+ K++D M IEG P T T L++ C ++ + ++ ++ +G+ P+
Sbjct: 297 AGQLDKARKVFDEMSIEG-CKPSTATYNALIQVTCKKGNLEDAVAVFDDMVRKGYIPNVV 355
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+L+ GLC G+ A + +M + + +Y +L RY ++ EK DL +
Sbjct: 356 TYTVLIRGLCHAGKVVRAMKLLDRMKSEGCEPNVQTYNVLIRYSLEEGEIEKGLDLFETM 415
Query: 484 KNLQAVLP 491
+ LP
Sbjct: 416 SKGEECLP 423
>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Glycine max]
Length = 642
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/398 (23%), Positives = 173/398 (43%), Gaps = 15/398 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-----HPSLLTL 139
KA++ F T +F L+++ + F++A E +HV + HP+ LT
Sbjct: 114 KAVDLFHRMWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTF 173
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
++++ + + ++ +E F REI + + ++ L+ C ++ + EA S
Sbjct: 174 ---NLVIKAMCRLGLVDKAIEVF----REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVS 226
Query: 200 VFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ ++ + PN N+L+ + GD+ M L+G P+ VTYN + G C
Sbjct: 227 LLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLC 286
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KG A+ L +M C+P+ T TLI+G + ++ + R + +
Sbjct: 287 LKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEY 346
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y+++IS L + N AMEL EM K G + + Y + GL + L+ M
Sbjct: 347 VYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEM 406
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL-DLLVTGLCSRGR 437
++P + T LM+ + + +W + + C H +L+ GLC G+
Sbjct: 407 KNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNN-CIHNEVCYSILINGLCKDGK 465
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ EA KQML R ++ +Y + AN E+
Sbjct: 466 FMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQ 503
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 86/303 (28%), Positives = 140/303 (46%), Gaps = 12/303 (3%)
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
F+S EE L R ER +F+ + F V+ +A+ ++A +F ++ F
Sbjct: 77 FRSLEEVLHQMKR-ERRVFL------EKNFIVMFKAYGKAHLPEKAVDLFHRMWGEFQCK 129
Query: 212 N--KTMNILLLGFKESGDVTAMEMFYHEMVLR---GFRPSVVTYNIRIDGYCKKGCFGDA 266
K+ N +L + G FY+ +V P+ +T+N+ I C+ G A
Sbjct: 130 QTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKA 189
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ +F E+ C P T +TL+HG I +A L DEM P++ A+N +IS+
Sbjct: 190 IEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISA 249
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + DL A +L+D M K + VTY+ + GL LE L ++M+ K VP
Sbjct: 250 LCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPN 309
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ F + R G + L RG + + L++GLC G++ +A E K
Sbjct: 310 DVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWK 369
Query: 447 QML 449
+M+
Sbjct: 370 EMV 372
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 162/390 (41%), Gaps = 52/390 (13%)
Query: 85 KALEFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLK 140
KA+E F+ + P PD + +H L + D+A L+ V+ T P+L+
Sbjct: 188 KAIEVFR---EIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLV--- 241
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ ++++S + K + D M F+ +N L+ C + ++++A S+
Sbjct: 242 AFNVLISALCKKGDLGRAAKLVDNM----FLKGCVPNEVTYNALVHGLCLKGKLEKAVSL 297
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++S + PN+ T L+ GF G + + RG R + Y+ I G CK
Sbjct: 298 LNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCK 357
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G F AM L++EM C P+ + LI G + +AR EM + P+
Sbjct: 358 EGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFT 417
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK--------------- 364
Y++++ D + A+ + EM H+ V Y + GL K
Sbjct: 418 YSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQML 477
Query: 365 -----------SSGLEGVC---------KLYDRMI-EGKFV-PKTRTVVMLMKFFCVNFR 402
SS + G C KL+++M+ +G V P T +L+ FC+
Sbjct: 478 SRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKS 537
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+ +++ ++D+G P D+ + L
Sbjct: 538 IFRAIDILNIMLDQGCDPDFITCDIFLKTL 567
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/242 (21%), Positives = 113/242 (46%), Gaps = 24/242 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + ++ EAR ++ ++ + PN+ T + L+ G+ E+GD + + EM
Sbjct: 383 YSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMA 442
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ V Y+I I+G CK G F +A+ ++++M + +++IHG +
Sbjct: 443 NNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVE 502
Query: 300 QARQLFDEMPKRN--LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
Q +LF++M + ++PD+ YN ++++ + + A+++++ M ++ D +T
Sbjct: 503 QGLKLFNQMLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDI 562
Query: 358 ---------------------MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ L+K G K+ + M+ +PK T M+++
Sbjct: 563 FLKTLRENMNPPQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQ 622
Query: 397 FC 398
C
Sbjct: 623 VC 624
>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
Length = 443
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 141/330 (42%), Gaps = 10/330 (3%)
Query: 113 LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
LA+ + +A LM + P++ T ++ L ++ + + EA D + + +
Sbjct: 44 LAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE------EAIDLLRKIVD 97
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
G + L+ +K EA +F ++ SR A + L+ G ++G +
Sbjct: 98 NGCTP-DVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIP 156
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
Y M +G P VVT + IDG CK G G A+R+F+ ME P+ + LI
Sbjct: 157 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 216
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
HG R + A ++ +M K PD YN +I L + D+ AA DEM E
Sbjct: 217 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCK 276
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D TY+ + G K+ + C ++D M + P T L+ C ++
Sbjct: 277 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLY 336
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ ++ +RG P LV GLC G+ E
Sbjct: 337 YQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/380 (24%), Positives = 162/380 (42%), Gaps = 47/380 (12%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPT + L+ L +M ++A +L+ + P ++T S+ I +
Sbjct: 66 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL------IDGLGKKKR 119
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ EA+ ++ +E+ + + L++ ++ +A SV+ + S+ P+ T++
Sbjct: 120 SFEAY-KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLS 178
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G ++G + A + M RG P+ V Y+ I G CK A+ + +M++
Sbjct: 179 TMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 238
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P T LI G ++ AR FDEM + KPD+ YN +IS + + +AA
Sbjct: 239 FCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298
Query: 337 MELMDEMEEKRIGHDNVTYHTMFF-----------------------------------G 361
+ D+M R + VTY T+ G
Sbjct: 299 CGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDG 358
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L KS LEG C L+D M E V ++T L+ C RVD ++L+ + G PH
Sbjct: 359 LCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PH 416
Query: 422 GHALDLLVTGLCSRGRWEEA 441
+A + +++ L G+ E
Sbjct: 417 PYAYNSIISALIKSGKVNEG 436
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 99/235 (42%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T +IL+ G ++G + E G + TY +D K +A+ L E++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P++ T L++G + + +A L ++ PD+ Y ++I L + +
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A +L EM + + D V Y + GL+++ + +Y M VP T+ +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ C R+ + ++ + RG P+ L+ GLC + + A E QM
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM 235
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 92/222 (41%)
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T++I I+G K G A L +E C + T TT++ + I +A L +++
Sbjct: 1 TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
P I YNA+++ L + L A++L+ ++ + D VTY ++ GL K
Sbjct: 61 TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
KL+ M T L++ ++ +++ + +G P L +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ GLC GR A K M R +E Y L L +A
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 222
>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
Length = 918
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 100/391 (25%), Positives = 167/391 (42%), Gaps = 17/391 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM--SIMLSRISKFQSYE 156
PT + L M ++ AW L ++ P++ T ++ + +S I K
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKV---- 373
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKT 214
+ F RM R+ G+ + +N L+ + +K A V + L+ R +PN T
Sbjct: 374 -AIGLFHRMSRD---GVFP-NTVTYNALINILVENRRIKYA-FVVLNLMGRNGCSPNIVT 427
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N ++ G+ GD + + M+ RG ++VTYN I GYC G A+R+ + M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P + T LI G + + A LF+EM L P+ Y A+I + L+
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L++ M+ + TY+ + GL K + G +L MIE P T ++
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C N L L ++ +I++G P+ L+ L G+ EEA ++
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 455 VSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +Y +M++ Y++ L RMIK
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 36/339 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ A VF ++ PN T + L+ G +SG V EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P+ T I C GC+ DA RLF +M+ C P++ T T LI G + +
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILK 372
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCR---------------------------- 331
A LF M + + P+ YNA+I+ L+ R
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432
Query: 332 -------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
D AM +M+ M ++ + VTY+T+ G S ++ D M +G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + L+ FC +++ L+ ++D G CP+ L+ G C + + A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ M + + +Y +L L + N E+L +++
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C A R + + P+ + L+ GF + + + ++EMV
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY IDGYCK A L E M+R C P++QT LIHG N
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M + + P++ Y AMI L + + A+E+ ++M E+ + +TY ++
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L+ + +P T V +++ + ++ +V+ N G +I G
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 420 PHGHALDLLVTGL 432
P +L+ GL
Sbjct: 703 PTLWTYGVLIKGL 715
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C + K+A V +L R + N T N ++ G+ +SG+ T+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +Y I G+CK A LF EM P+ T T LI G +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L + M + +P++ YN +I L + + + A EL M E+ I + VTY M
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ +++++MIE +P T L++ +V+ NL+ L G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--ANEKLE 477
P ++ G+ E AF +M+ Q + +Y +L + L A+++L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 727
Query: 478 DLDRMIKN 485
L ++ N
Sbjct: 728 ALPDVVPN 735
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 1/274 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN N ++ + G+V E ++ P TY I G+C+K A+++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +M + C P+ T +TLI+G +++A L EM + P I +L
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A L +M+ K + TY + GL S L+ L+ RM P T T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVT 392
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ N R+ + + G P+ + ++ G C G ++A ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 450 VRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
R + +Y +++ Y N L LD M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 34/273 (12%)
Query: 119 FDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
D A L+ H++R+ P++ T + L++ + F EE + +E IF + +
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM--IEEGIFPNVVTY 603
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFY 235
++ C A +F K++ + PN T + L+ + G V E +
Sbjct: 604 -----TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---- 291
E+ G P +TY I+ Y G A M + C P+L T LI G
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Query: 292 -----------AGLVRNIHQARQLFDE-----MPKRNLKPDIG----AYNAMISSLIRCR 331
+V N Q D+ M + + D G NA++S+L
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
A EL+ M + + D Y+++ L++
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 294 LVRNIHQ----ARQL--FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+++ H AR + D + + L+ + AY+A++ L R A M+ M +
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ + + Y+ + L K + + ++ E + P T T ++ C +D L
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++ + G P+ L+ GLC GR EAF+ ++M++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313
>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
Length = 634
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 169/382 (44%), Gaps = 8/382 (2%)
Query: 85 KALEFFK--FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
+A E FK + ++ P + L + ++ + AW L + + R S T+ +
Sbjct: 172 RADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISS-TVYTF 230
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+IM++ + K ++ E ME F K +N ++ + ++ ++ AR +
Sbjct: 231 NIMVNVLCKEGKLKKAREFIGFMEGLGF----KPNVVSYNTIIHGYSSRGNIEGARRILD 286
Query: 203 KL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + P++ T L+ G + G + + +MV G P+ VTYN IDGYC KG
Sbjct: 287 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 346
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A +EM + +PS+ T L+H + + +A + EM K+ + PD YN
Sbjct: 347 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 406
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ RC + A +L +EM K I +VTY ++ + L + + ++ L++++++
Sbjct: 407 ILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQ 466
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P ++ C N V+ L + + P + L+ G C G+ EEA
Sbjct: 467 GVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEA 526
Query: 442 FECSKQMLVRRRQVSEASYRML 463
+M R + SY L
Sbjct: 527 RMLLDEMKRRGIKPDHISYNTL 548
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 3/287 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+++ C + ++K+AR F+ + F PN + N ++ G+ G++ M
Sbjct: 230 FNIMVNVLCKEGKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
++G P TY I G CK+G +A LF++M + +P+ T TLI G ++
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A DEM K+ + P + YN ++ +L + A +++ EM +K I D +TY+ +
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + + L++ M+ P T L+ R+ +L+ ++D+G
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P + +V G C+ G E AF K+M + E ++ L +
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 515
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 172/408 (42%), Gaps = 47/408 (11%)
Query: 64 LSSTLVE-NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
+SST+ N++ + KA EF F ++ F P ++ +H + + A
Sbjct: 223 ISSTVYTFNIMVNVLCKEGKLKKAREFIGF-MEGLGFKPNVVSYNTIIHGYSSRGNIEGA 281
Query: 123 WELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
++ V+ P T S+ +S + K EE FD+M + +G+ +
Sbjct: 282 RRILDAMRVKGIEPDSYTYGSL---ISGMCKEGRLEEASGLFDKM---VEIGLVP-NAVT 334
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + +++ A S +++ + P+ T N+L+ G + + EM
Sbjct: 335 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 394
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +TYNI I+GY + G A L EM P+ T T+LI+ +
Sbjct: 395 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 454
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLI------------------------------- 328
+A LF+++ + + PD+ +NAM+
Sbjct: 455 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 514
Query: 329 --RCRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
RCR+ + A L+DEM+ + I D+++Y+T+ G + ++ ++ D M+ F
Sbjct: 515 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 574
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
P T L+K C N DL L ++++G P L+ G+
Sbjct: 575 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 8/263 (3%)
Query: 234 FYHEMVLRGFRPSV---VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ E+ L R SV + +++ + C+ +A + F M+ +P ++T ++
Sbjct: 141 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 200
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ + A L+ EM + + + +N M++ L + L A E + ME
Sbjct: 201 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 260
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ V+Y+T+ G +EG ++ D M P + T L+ C R++ L+
Sbjct: 261 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 320
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+++ G P+ + L+ G C++G E AF +M+ + S ++Y +L L
Sbjct: 321 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 380
Query: 471 NANEKLEDLDRMIKNL--QAVLP 491
++ + D MIK + + ++P
Sbjct: 381 G---RMGEADDMIKEMRKKGIIP 400
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 15/247 (6%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ + + + + N+L ++ N KA + L PT + +++L
Sbjct: 389 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVL 447
Query: 114 ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+R +A +L + Q P ++ +M + + E M+R
Sbjct: 448 SRRNRMKEADDLFEKILDQGVSPDVIMFNAM---VDGHCANGNVERAFMLLKEMDR---- 500
Query: 172 GIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ +E FN L+Q C + +++EAR + ++ R P++ + N L+ G+ GD+
Sbjct: 501 --KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 558
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM+ GF P+++TYN I CK A L +EM P T +L
Sbjct: 559 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 618
Query: 289 IHGAGLV 295
I G G V
Sbjct: 619 IEGMGNV 625
>gi|242074540|ref|XP_002447206.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
gi|241938389|gb|EES11534.1| hypothetical protein SORBIDRAFT_06g030430 [Sorghum bicolor]
Length = 446
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 174/391 (44%), Gaps = 12/391 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYFDQA 122
SS VL L ++ +AL+FF ++ + PT + + IL + F A
Sbjct: 35 SSLDASAVLETLSLYANDWRRALDFFHWSASPTGANLPPTAATLARAVDILGKHFEFPLA 94
Query: 123 WELM-SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
L+ SH P+ L ++ +L+R++ ++ L AFD I G+R S F
Sbjct: 95 TSLLLSHHDPEDPAFLR-PALRALLNRLAAANLVDDALRAFDSTAASI--GLRDEAS--F 149
Query: 182 NVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
++L+ A C + + EA + F K F P KT N+LL G+ ++ + + +M
Sbjct: 150 HLLVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKTRAWARLRQLWFDMDR 209
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG + +Y+I +D K G ++F+EM++ T IH GL + +
Sbjct: 210 RGVAKDLHSYSIYMDALAKSGKPWKTFKVFKEMKQKGVRIDTVAYNTAIHAVGLAQGVDS 269
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L+ +M KP+ YN ++ + + +M + D +TYH F
Sbjct: 270 AVRLYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQ 329
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + + V L+++M+E P+ T VML+K F + +W + ++G P
Sbjct: 330 FLSRP---QEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSP 386
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
A + L+ L +G + A + ++ML +
Sbjct: 387 DAFAYNALIDALLQKGMVDLARKYDEEMLAK 417
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 66/155 (42%), Gaps = 3/155 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
Y +MV G +P+ TYN + +CK+G F + ++M + C P + T
Sbjct: 273 LYRQMVDAGCKPNTATYNGIVKLFCKEGRFKEGYAFVQQMHKTGCKPDVLTYHCFFQ--- 329
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + LF++M +R +P + Y +I R L + MEE+ + D
Sbjct: 330 FLSRPQEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAF 389
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
Y+ + L++ ++ K + M+ PK R
Sbjct: 390 AYNALIDALLQKGMVDLARKYDEEMLAKGLSPKPR 424
>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 10/344 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + L L +A EL+ +++ P++ T ++ LSR KF E
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF---EIA 361
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
+ + +M + V + +N L+ C + + A ++F +LS + P+ +T N
Sbjct: 362 IGLYHKMLADGLVPT----TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ F GD+ + + +M+ G P+V+TYN I GYCK+G +AMRL E M+
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P T T LI G + A LF M + + P+ Y A+I ++ A+
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L +M E + TY+ M G K++ + +M++ +P T +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C N R L ++ + R + P+ + L+ GLC GR E+A
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 12/348 (3%)
Query: 99 FTPTPDAFEKTLHILARMRY--FDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQS 154
+ P+AF T IL R D A+ + + + P+ +T ++ I+ S
Sbjct: 231 YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL------INGLCS 284
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
EA D +E + GI + + L + C EA + K+ R PN +
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEP-TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ G G YH+M+ G P+ VTYN I+ C +G F A +F+ M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
LPS QT +I L+ +I +A +FD+M K P++ YN +I + +L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
N AM L++ M+ + D TY + G + LE L+ M+E P T +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ + +VD L L+ +++ G P +++++G EA
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 141/341 (41%), Gaps = 5/341 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I L + E +E +M++ V + F L+ + + A
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP----NIQTFTALISGLSRDGKFEIA 361
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ K+L+ P T N L+ G + M+ G PS TYN I
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C G AM +F++M + P++ T TLI+G N++ A +L + M LKPD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y +IS R L A L M E I ++VTY + G + ++ L+
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M+E +P ++T +++ F + N G ++ +G P+ + GLC G
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
R AF+ +M R + +Y L L Q E E
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 165/396 (41%), Gaps = 48/396 (12%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
PSLLT +M +L + + Q + + R + + + L+ C
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP-------NAFTYTSLILGHCRNHN 252
Query: 194 MKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYN 251
+ A ++F +++ PN+ T + L+ G G + AM+M EMV +G P+V TY
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML-EEMVQKGIEPTVYTYT 311
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + C GC +A+ L +M++ C+P++QT T LI G A L+ +M
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371
Query: 312 NLKPDIGAYNAMISSL-------------------------------IRC----RDLNAA 336
L P YNA+I+ L I+C D+ A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
M + D+M + + +TY+T+ +G K L +L + M P T L+
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F +++ +L+ +++ G P+ ++ G + + ++A +M+ S
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 457 EASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLP 491
+Y ++ + N+ + E+ +M+K Q +LP
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVK--QGLLP 585
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 184/451 (40%), Gaps = 27/451 (5%)
Query: 43 HPFPD------QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQH 96
+PFP+ L +H + LS L + + + H N L FF + +
Sbjct: 45 NPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRR 104
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F F L+ L R R F A + + ++ + +K ++ LS I+ +
Sbjct: 105 KFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFG 164
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
TL +F + + + KF + AR +++K+L S P+ T
Sbjct: 165 YTLCSFTTL----LIQLGKFDMVDL---------------ARDMYIKMLNSGIRPSLLTF 205
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ + G V ++ + P+ TY I G+C+ A +F+ M +
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T +TLI+G + +A + +EM ++ ++P + Y + SL +
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+EL+ +M+++ + T+ + GL + E LY +M+ VP T T L+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
CV R + ++ +++ G P + ++ C G ++A +ML
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 456 SEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ +Y ++ Y Q N N + L+ M N
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 140/358 (39%), Gaps = 47/358 (13%)
Query: 153 QSYEETLEAFDRM-----EREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RSVFV 202
Q+Y E ++ F M IF + K GS +N L+ +C Q + A R + +
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ P+ T L+ GF G + ++ M+ G P+ VTY IDGY
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA+ LF +M LPS QT +I G +I +A +M K+ L P++ Y +
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS---------------- 366
I L R A ++ EME++ + TY ++ +GL +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 367 ---------------GL--EGVCKLYDRMI----EGKFVPKTRTVVMLMKFFCVNFRVDL 405
GL EG C D+++ + P L+ C N +V+
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
LN++ + GF H L+ LC EEA + ML + E + +L
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVL 770
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 9/260 (3%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
++ ++M+S SK S E +M ++ + + + S + C A
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS-----FIDGLCRNGRTGLAF 607
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF--YHEMVLRGFRPSVVTYNIRID 255
+F ++ R + PN T + L+ G + G EM+ + G P+V TY +
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
G C +G +A +L M++ PS + L+ G + A +F M +
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+ Y A+I +L + + A + M EK D V + + GL+K + KL
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLCLKLL 787
Query: 376 DRMIEGKFVPKTRTVVMLMK 395
M +T VML +
Sbjct: 788 HVMESRNCTLNFQTYVMLAR 807
>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
Length = 698
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 167/374 (44%), Gaps = 11/374 (2%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L R + +AL + ++ P + + R D+A L+ ++
Sbjct: 161 NILVRALCGRGHRKEALSVLR-DMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR 219
Query: 131 RT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
P+L+T S+ ++ I K E+ + FD M +E G+ G +N L+ +
Sbjct: 220 EGGLKPNLVTFNSV---VNGICKAGRMEDARKVFDEMVKE---GLAPDGVS-YNTLVGGY 272
Query: 189 CTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C EA SVF ++ + P+ T L+ ++G++ EM RG + +
Sbjct: 273 CKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNE 332
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+T+ IDG+CKKG DA+ EM + PS+ LI+G +V + +AR+L E
Sbjct: 333 ITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVRE 392
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M + +KPD+ Y+ ++S+ + D ++A +L +M E + D +TY ++ L +
Sbjct: 393 MEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKR 452
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L L+ MI P T L+ C V+ L+L ++ G P +
Sbjct: 453 LGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSV 512
Query: 428 LVTGLCSRGRWEEA 441
L+ GL R +EA
Sbjct: 513 LINGLSKSARTKEA 526
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 142/307 (46%), Gaps = 4/307 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L++A C + KEA SV + PN T N L+ F +G+V E M
Sbjct: 160 YNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMR 219
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P++VT+N ++G CK G DA ++F+EM + P + TL+ G V H
Sbjct: 220 EGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSH 279
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F EM ++ + PD+ + ++I + + +L A+ L+ EM E+ + + +T+ +
Sbjct: 280 EALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALI 339
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K L+ M + + P L+ +C+ R+D L + +G
Sbjct: 340 DGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVK 399
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +++ C G AF+ ++QML +Y L R L + ++L D
Sbjct: 400 PDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCE---EKRLGDA 456
Query: 480 DRMIKNL 486
+ KN+
Sbjct: 457 HVLFKNM 463
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 127/305 (41%), Gaps = 36/305 (11%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AFC E+ A R V + PN T N ++ G ++G + + EMV
Sbjct: 195 YNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMV 254
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+YN + GYCK GC +A+ +F EM R +P + T T+LIH N+
Sbjct: 255 KEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLE 314
Query: 300 QARQLFDEMPKRNL-----------------------------------KPDIGAYNAMI 324
+A L EM +R L +P + YNA+I
Sbjct: 315 RAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALI 374
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++ A EL+ EME K + D VTY T+ K+ +L +M+E +
Sbjct: 375 NGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVL 434
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L++ C R+ L+ +I G P L+ G C G E A
Sbjct: 435 PDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSL 494
Query: 445 SKQML 449
+M+
Sbjct: 495 HDEMV 499
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/256 (23%), Positives = 116/256 (45%), Gaps = 1/256 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+AP+ N +LL ++ + + F+ M+ G P+V TYNI + C +G +A+
Sbjct: 119 YAPSVLAYNAVLLALSDA-SLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEAL 177
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ +M C P+ T TL+ + +A +L D M + LKP++ +N++++ +
Sbjct: 178 SVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGI 237
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ + A ++ DEM ++ + D V+Y+T+ G K ++ M +P
Sbjct: 238 CKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDV 297
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T L+ C ++ + L + +RG + L+ G C +G ++A ++
Sbjct: 298 VTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVRE 357
Query: 448 MLVRRRQVSEASYRML 463
M R Q S Y L
Sbjct: 358 MRQCRIQPSVVCYNAL 373
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 16/285 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC + + +A ++ R P+ N L+ G+ G + EM
Sbjct: 335 FTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREME 394
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P VVTY+ + YCK G A +L ++M LP T ++LI + +
Sbjct: 395 AKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLG 454
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF M L+PD Y ++I + ++ A+ L DEM + + D VTY +
Sbjct: 455 DAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLI 514
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT---------------RTVVMLMKFFCVNFRVD 404
GL KS+ + +L ++ + VP ++V+ L+K FC+ ++
Sbjct: 515 NGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMN 574
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ ++DR + G +L+ G C G +A KQML
Sbjct: 575 EADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQML 619
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 146/330 (44%), Gaps = 19/330 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C M EAR + ++ ++ P+ T + +L + ++GD + +M+
Sbjct: 370 YNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQML 429
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +TY+ I C++ GDA LF+ M + P T T+LI G N+
Sbjct: 430 ENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVE 489
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L DEM K + PD+ Y+ +I+ L + A L+ ++ + N+ Y +
Sbjct: 490 RALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM 549
Query: 360 -----------FGLMKSSGLEGVC----KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
L+K ++G+ K+Y +++ + +L+ C V
Sbjct: 550 RCCRNAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVM 609
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML-VRRRQVSEASYRML 463
L+ ++ GF P+ + L+ GL +G EA + +Q+L +EAS ++
Sbjct: 610 KALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALI 669
Query: 464 QRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
L + N + L+ L M ++ +LP P
Sbjct: 670 DLNLKEGNVDAVLDVLHGMARD--GLLPSP 697
>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 504
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 176/411 (42%), Gaps = 23/411 (5%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WELMSHVQRTHPSLLTLKSMSIM 145
FF P P+ F + L +++M+ +D WE M + H L + +I+
Sbjct: 69 FFHMVQCRP--LPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPH----NLCTCNIL 122
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF 201
L+ + L +M K G E F LL FC + +A +F
Sbjct: 123 LNCFCRCSQLSLALSFLGKM--------MKLGHEPDIVTFGSLLNGFCRGDRIYDALYMF 174
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++ + PN N ++ G +S V + M + G RP VTYN I G C
Sbjct: 175 DRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNS 234
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G + DA R+ M + P + T LI I +A +L++EM +R+L PDI Y
Sbjct: 235 GRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTY 294
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ +I L L+ A ++ M K D VTY + G KS +E KL+ M +
Sbjct: 295 SLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQ 354
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
V T T +L++ +C ++++ ++ +++ G P+ ++L+ GLC G+ E+
Sbjct: 355 RGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEK 414
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
A M +Y ++ R + +A DL + NL+ + P
Sbjct: 415 ALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSL-NLKGLTP 464
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 18/292 (6%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PDA + + L +D A ++S + + +P + T ++ + + EE
Sbjct: 219 PDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEEL 278
Query: 159 LEAFDR--MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTM 215
E R ++ +I +++L+ C + EA +F ++S+ P+ T
Sbjct: 279 YEEMIRRSLDPDIVT---------YSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTY 329
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+IL+ G+ +S V + EM RG + VTY + I GYC+ G A +F+ M
Sbjct: 330 SILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVF 389
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T L+HG I +A + +M K + DI YN +I + + ++
Sbjct: 390 CGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVAD 449
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK-LYDRMIEGKFVPK 386
A +L + K + D TY M GL K GL G L+ +M E +P
Sbjct: 450 AWDLYCSLNLKGLTPDIWTYTAMMLGLYK-KGLRGEADALFRKMKEDGILPN 500
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/179 (23%), Positives = 86/179 (48%), Gaps = 4/179 (2%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
D++ LF M + LPS+ + L+ ++ L+++M + ++ N ++
Sbjct: 64 DSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILL 123
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ RC L+ A+ + +M ++GH D VT+ ++ G + + ++DRM+E
Sbjct: 124 NCFCRCSQLSLALSFLGKM--MKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ P ++ C + +VD L+L + G P + L++GLC+ GRW++A
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDA 240
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 80/186 (43%), Gaps = 3/186 (1%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ + LF M + P I ++ ++S++ + + + + L ++M+ I H+ T +
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S L +M++ P T L+ FC R+ L ++ +++ G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMG 181
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
+ P+ + ++ GLC + + A + +M V + +Y L L + + +
Sbjct: 182 YEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSG---RWD 238
Query: 478 DLDRMI 483
D RM+
Sbjct: 239 DATRMV 244
>gi|255660842|gb|ACU25590.1| pentatricopeptide repeat-containing protein [Priva cordifolia]
Length = 418
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 156/342 (45%), Gaps = 19/342 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
ALE F+ + +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 ALECFRLSREHKFWVPF-DTCRKVLDHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
++ R K E R+ + +F I K+G + FN L+ + + E +
Sbjct: 142 LMHRFCK--------EGEIRLAQLVFDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRL 193
Query: 201 FVKLLSRFA-PNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ + A P+ T ++L+ G KES A E+F EM+ +G P+ VT+ IDG+C
Sbjct: 194 KNAMHASGAQPDVYTYSVLINGLCKESKMDEAHELF-DEMLEKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++++ P L T TLI+G ++ Q R L DEM + LKPD
Sbjct: 253 KNGKLDLAMEIYKQILSQGLSPDLITYNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A E +M E+ I D+V Y + GL K K+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKKMIEENIRLDDVVYTALISGLCKEGRSVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ P + T ++M FC N V+ G L + G P
Sbjct: 373 LSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLKEMQRDGHVP 414
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/404 (24%), Positives = 177/404 (43%), Gaps = 37/404 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH L KS+ +++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLPEAKSLIQVIVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V F+ L+ A+ +++A F LSR + P
Sbjct: 53 AAILETKGTQRSDIYV---------FSGLITAYLESGFLRDALECF--RLSREHKFWVPF 101
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK+G A +
Sbjct: 102 DTCRKVLDHLMKLKYFKLVWG---FYKEILECGYPASLYFFNILMHRFCKEGEIRLAQLV 158
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F+ + + PS+ + TL++G + + + +L + M +PD+ Y+ +I+ L +
Sbjct: 159 FDAITKWGLKPSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTYSVLINGLCK 218
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A EL DEM EK + + VT+ T+ G K+ L+ ++Y +++ P T
Sbjct: 219 ESKMDEAHELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLIT 278
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ FC + +L + +G P L+ G C G E AFE K+M+
Sbjct: 279 YNTLIYGFCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMI 338
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
++ + Y L L + + D ++M++ + +V P
Sbjct: 339 EENIRLDDVVYTALISGLCKEGRS---VDAEKMLREMLSVGLKP 379
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 51/253 (20%), Positives = 92/253 (36%), Gaps = 72/253 (28%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ +M D+ + L + H P + T S++++ + K +E
Sbjct: 169 PSVVSFNTLMNGYIKMGILDEGFRLKNAMHASGAQPDVYTY---SVLINGLCKESKMDEA 225
Query: 159 LEAFDRM---------------------------EREIFVGIRKFGSE----EFNVLLQA 187
E FD M EI+ I G +N L+
Sbjct: 226 HELFDEMLEKGLVPNGVTFTTLIDGHCKNGKLDLAMEIYKQILSQGLSPDLITYNTLIYG 285
Query: 188 FCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV------------------ 228
FC + ++K+ R + ++ + P+ T L+ G + GD+
Sbjct: 286 FCKKGDLKQTRDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKKMIEENIRLD 345
Query: 229 ----TAM-------------EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
TA+ E EM+ G +P TY I ++ +CK G +L +
Sbjct: 346 DVVYTALISGLCKEGRSVDAEKMLREMLSVGLKPDSGTYTIVMNEFCKNGDVNTGSKLLK 405
Query: 272 EMERVACLPSLQT 284
EM+R +PS+ T
Sbjct: 406 EMQRDGHVPSVVT 418
>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
Length = 991
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 195/467 (41%), Gaps = 66/467 (14%)
Query: 64 LSSTLVENVLGRLFAAHSNG---LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
L+ ++ + LF A S AL FF++ + F T D+ LH+L+R R
Sbjct: 48 LAPSVTAAHVADLFRAESTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPA 107
Query: 121 Q--------------------AWELMSHVQRTHPSLLTL--KSMSIMLSRISKFQSYEET 158
Q + + + ++RT + L L K + L +++F E
Sbjct: 108 QYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYM 167
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
+ ++ ++ + + +N +++++C + ++ A F LL P T N
Sbjct: 168 GRVYSQLVQDGLLP----DTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNA 223
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+LG+ +G++ + M L G + + +Y I I G C+ C +A+ LF M+R
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG 283
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P+++ T LI G + AR LFD MP+ + P + YNAMI + +N A+
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ + ME+ D+ TY+T+ +GL E +L + ++ F P T L+ +
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAE-ELLNNAVKEGFTPTVVTFTNLINGY 402
Query: 398 CVNFRVD---------------LGLNLWGYLID--------------------RGFCPHG 422
C+ + D L L ++G LI+ G P+
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ G C G+ + A E K M Q + +Y L LV+
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P++ T N L+ G + A E+ + V GF P+VVT+ I+GYC F DA+R+
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELL-NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+M C LQ LI+ + +A++L +E+ L P++ Y ++I +
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A+E++ ME + TY+++ +GL+K L L +M + +P T
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L++ C D L+ + G P HA +L LC GR EEA+
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAY 587
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 18/340 (5%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSR 207
I F T A +ER I G S ++VLL A C QK + EA + ++ L
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTP-DSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
IL+ G + Y+EM G +PS TY + I+ YCK+G DA
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +MER P + T LI G G + I +A M + +P+ Y ++ L
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 328 IRCR----------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ +L+ +L++ M + + TY ++ G K+ LE
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
C L D M P +L+K C + L+ + + GF P + LLV G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
LC+ G +E+ +L E ++++L L++A
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 155/407 (38%), Gaps = 40/407 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTPT F ++ FD A M + + L L+ +++ + K +E
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALR-MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
E + + V + ++ +C ++ A V +K++ R PN T N
Sbjct: 447 KELLNEISANGLVP----NVITYTSIIDGYCKSGKVDIALEV-LKMMERDGCQPNAWTYN 501
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + + +M G P+V+TY + G C + F +A RLFE ME+
Sbjct: 502 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQN 561
Query: 277 ACLPSLQTI--------------------------------TTLIHGAGLVRNIHQARQL 304
P TTLI G N A L
Sbjct: 562 GLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ M PD Y+ ++ +L + + LN A+ ++D+M + I Y + +++
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++Y+ M P T + + +C R++ +L + G P
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++L+ G G + AF K+M+ + + +Y +L ++L++ N
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
>gi|410109935|gb|AFV61047.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
origanoides]
Length = 431
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 161/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
V L S P+ T ++L+ G KES A E F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXF-DEMLVKGLVPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A ++++M + LP L T TLI+G ++ QA L D+M + LKPD
Sbjct: 259 KNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSMKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ I D+V Y + GL + K+ M
Sbjct: 319 TYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ + P T T M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVRLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 431
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSXNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A E DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSVMLASGVQPDVYTYSVLINGLCKESKMDDANEXFDEMLVKGLVPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAKEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + Y L L Q +
Sbjct: 309 SMKGLKPDKITYTTLIBGCCKEGDLDSAFEHRKRMIQENIRLDDVVYTALISGLCQEGRS 368
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
D ++M++ + +V L P T
Sbjct: 369 ---VDAEKMLREMLSVRLKPDT 387
>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
Length = 558
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 155/357 (43%), Gaps = 5/357 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ L F ME + GIR ++ L+ C+ +A + +
Sbjct: 190 IIDSLCKYRHVDDALNLFKEMETK---GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM 245
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T N L+ F + G E + +M+ R P + TYN I+G+C
Sbjct: 246 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 305
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++FE M C P L T TLI G + + +LF EM R L D Y +
Sbjct: 306 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 365
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L D + A ++ +M + D +TY + GL + LE +++D M + +
Sbjct: 366 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 425
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+++ C +VD G +L+ L +G P+ + +++GLCS+ +EA+
Sbjct: 426 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 485
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVAQ 500
K+M +Y L R ++ +L R +++ + V T VA
Sbjct: 486 LLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 542
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/380 (22%), Positives = 169/380 (44%), Gaps = 15/380 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A L + ++ P L ++ + +LS I+K + ++ + + + K G
Sbjct: 23 LDDAIGLFGGMVKSRP-LPSIFEFNKLLSAIAKMKKFDLVISL------ALLGKMMKLGY 75
Query: 179 E----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEM 233
E + LL +C K + +A ++ +++ + P+ T L+ G +
Sbjct: 76 EPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVA 135
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
MV RG +P++VTY + ++G CK+G A L +ME + T+I
Sbjct: 136 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLC 195
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
R++ A LF EM + ++P++ Y+++IS L + A +L+ +M EK+I + V
Sbjct: 196 KYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLV 255
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T++ + +K KL+D MI+ P T L+ FC++ R+D ++ ++
Sbjct: 256 TFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFM 315
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+ + P + L+ G C R E+ E ++M R +Y L + L +
Sbjct: 316 VSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH---D 372
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
++ ++ K + + PP
Sbjct: 373 GDCDNAQKVFKQMVSDGVPP 392
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 98/393 (24%), Positives = 176/393 (44%), Gaps = 15/393 (3%)
Query: 101 PTPDAFE--KTLHILARMRYFDQ--AWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQS 154
P P FE K L +A+M+ FD + L+ + + PS++TL S+ ++ +
Sbjct: 38 PLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVTLSSL------LNGYCH 91
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNK 213
+ +A +++ + +G R + F L+ + EA ++ +++ R PN
Sbjct: 92 GKRISDAVALVDQMVEMGYRP-DTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLV 150
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T +++ G + GD+ ++M VV +N ID CK DA+ LF+EM
Sbjct: 151 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 210
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E P++ T ++LI A QL +M ++ + P++ +NA+I + ++
Sbjct: 211 ETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKF 270
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A +L D+M ++ I D TY+++ G L+ ++++ M+ P T L
Sbjct: 271 VEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTL 330
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+K FC + RV+ G L+ + RG L+ GL G + A + KQM+
Sbjct: 331 IKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGV 390
Query: 454 QVSEASYRMLQRYLVQANANEK-LEDLDRMIKN 485
+Y +L L EK LE D M K+
Sbjct: 391 PPDIMTYSILLDGLCNNGKLEKALEVFDYMQKS 423
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/313 (24%), Positives = 139/313 (44%), Gaps = 11/313 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
AL FK ++ P + + L + A +L+S + ++ +P+L+T ++
Sbjct: 203 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ KF E+ + D ++R I I +N L+ FC + +A+ +F
Sbjct: 262 DAFVKEGKFVEAEKLHD--DMIKRSIDPDIF-----TYNSLINGFCMHDRLDKAKQMFEF 314
Query: 204 LLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++S+ P+ T N L+ GF +S V + EM RG VTY I G G
Sbjct: 315 MVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGD 374
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A ++F++M P + T + L+ G + +A ++FD M K +K DI Y
Sbjct: 375 CDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTT 434
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
MI + + ++ +L + K + + VTY+TM GL L+ L +M E
Sbjct: 435 MIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDG 494
Query: 383 FVPKTRTVVMLMK 395
+P + T L++
Sbjct: 495 PLPDSGTYNTLIR 507
>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 559
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 138/305 (45%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ L F ME + GIR ++ L+ C+ +A + +
Sbjct: 191 IIDSLCKYRHVDDALNLFKEMETK---GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM 246
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T N L+ F + G E + +M+ R P + TYN I+G+C
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++FE M C P L T TLI G + + +LF EM R L D Y +
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L D + A ++ +M + D +TY + GL + LE +++D M + +
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 426
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+++ C +VD G +L+ L +G P+ + +++GLCS+ +EA+
Sbjct: 427 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 486
Query: 444 CSKQM 448
K+M
Sbjct: 487 LLKKM 491
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 16/370 (4%)
Query: 101 PTPDAFE--KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P P FE K L +A+M+ FD L +QR S L + +I+++ +
Sbjct: 6 PLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISH-NLYTYNILINCFCRRSQISLA 64
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
L +M K G E + LL +C K + +A ++ +++ + P+
Sbjct: 65 LALLGKM--------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTI 116
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ G + MV RG +P++VTY + ++G CK+G A L +M
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E + T+I R++ A LF EM + ++P++ Y+++IS L
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L+ +M EK+I + VT++ + +K KL+D MI+ P T L
Sbjct: 237 SDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSL 296
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FC++ R+D ++ +++ + P + L+ G C R E+ E ++M R
Sbjct: 297 INGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGL 356
Query: 454 QVSEASYRML 463
+Y L
Sbjct: 357 VGDTVTYTTL 366
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/307 (26%), Positives = 135/307 (43%), Gaps = 37/307 (12%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEM 238
EFN LL A K+ S+ K+ +N T NIL+ F ++ +M
Sbjct: 12 EFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKM 71
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G+ PS+VT + ++GYC DA+ L ++M + P T TTLIHG L
Sbjct: 72 MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA 131
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A L D M +R +P++ Y +++ L + D++ A L+++ME +I D V ++T+
Sbjct: 132 SEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTI 191
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
++ +CK VD LNL+ + +G
Sbjct: 192 ---------IDSLCKYR--------------------------HVDDALNLFKEMETKGI 216
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ L++ LCS GRW +A + M+ ++ + ++ L V+ + E
Sbjct: 217 RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEK 276
Query: 479 L-DRMIK 484
L D MIK
Sbjct: 277 LHDDMIK 283
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/336 (22%), Positives = 140/336 (41%), Gaps = 32/336 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
AL FK ++ P + + L + A +L+S + ++ +P+L+T ++
Sbjct: 204 ALNLFK-EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 262
Query: 144 IMLSRISKFQ-------------------SYEETLEAF---DRMER-----EIFVGIRKF 176
+ KF +Y + F DR+++ E V F
Sbjct: 263 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 322
Query: 177 GS-EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF 234
+ +N L++ FC K +++ +F ++ R + T L+ G GD +
Sbjct: 323 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 382
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +MV G P ++TY+I +DG C G A+ +F+ M++ + TT+I G
Sbjct: 383 FKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCK 442
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ LF + + +KP++ YN MIS L R L A L+ +M+E D+ T
Sbjct: 443 AGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGT 502
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
Y+T+ ++ +L M +FV T+
Sbjct: 503 YNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/155 (20%), Positives = 70/155 (45%)
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P I +N ++S++ + + + + L ++M+ I H+ TY+ + + S + L
Sbjct: 8 PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+M++ + P T+ L+ +C R+ + L +++ G+ P L+ GL
Sbjct: 68 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ EA +M+ R Q + +Y ++ L +
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 162
>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g22960, mitochondrial-like [Cucumis sativus]
Length = 717
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 148/342 (43%), Gaps = 39/342 (11%)
Query: 159 LEAFDRMEREIFVGIRKFGS-EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMN 216
+EAFD +E V R F + +N L+ C ++ R F +L S+F P+ + N
Sbjct: 302 VEAFDLVEE--MVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSFN 359
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G+ +G ++ + + E+ R P+V+TYN I G C G A+RL +EM
Sbjct: 360 SLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTDQ 419
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T T L++G + + AR F+EM + LKPD AYN I ++ D + A
Sbjct: 420 GLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVA 479
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ +EM D +TY+ L + E C L + M+ +P T ++
Sbjct: 480 FSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIING 539
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCP---------HGHA----LDL---------------- 427
F N + ++ ++ +G P H HA LDL
Sbjct: 540 FVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPAN 599
Query: 428 ------LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ GLC R +EA++ +M + ++ SY +L
Sbjct: 600 VITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTIL 641
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/423 (22%), Positives = 173/423 (40%), Gaps = 23/423 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR------------TH 133
AL FF++ + P F + F L IL A+ +M V H
Sbjct: 102 ALRFFRWVMAQPDFKESEFVFCAILDILVGNDLMHAAYWVMERVVSFEMHGVVDVLIAGH 161
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETL-----EAFDRMEREIFVGIRKFGSE----EFNVL 184
L + I + ++ L E + ++ + +FG + +N +
Sbjct: 162 VXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTM 221
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L ++C + + +A + ++ R PN+ T N+L+ G + G++ + EM+ G
Sbjct: 222 LDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGL 281
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
S TYN I+G+C+KG F +A L EEM P+L T TL++G + R
Sbjct: 282 NVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRL 341
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
F +M K PDI ++N+++ R ++ A L DE++ + + +TY+T+ GL
Sbjct: 342 RFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLC 401
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
L+ +L M + P T +L+ V + + ++ +G P
Sbjct: 402 MWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRF 461
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRM 482
A + + G AF ++ML +Y + L Q N E + L+ M
Sbjct: 462 AYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENM 521
Query: 483 IKN 485
+ +
Sbjct: 522 VSD 524
>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
repeats [Arabidopsis thaliana]
gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 632
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/390 (24%), Positives = 171/390 (43%), Gaps = 15/390 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F ++ F P+ F K L +A+M F+ L +Q S L + SI
Sbjct: 67 AVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIF 124
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF 201
++ + L +M K G E + LL +C K + +A ++
Sbjct: 125 INCFCRRSQLSLALAVLAKM--------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 202 VKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++ + P+ T L+ G + +MV RG +P +VTY ++G CK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ L ++ME+ + T+I G +++ A LF EM + ++PD+ Y
Sbjct: 237 GDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTY 296
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+++IS L + A L+ +M E++I + VT+ + +K L KLYD MI+
Sbjct: 297 SSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIK 356
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T L+ FC++ R+D +++ +I + P+ L+ G C R EE
Sbjct: 357 RSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEE 416
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
E ++M R + +Y L QA
Sbjct: 417 GMELFREMSQRGLVGNTVTYTTLIHGFFQA 446
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 141/305 (46%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ L F M+ + GIR ++ L+ C +A + +
Sbjct: 264 IIDGLCKYKHMDDALNLFTEMDNK---GIRP-DVFTYSSLISCLCNYGRWSDASRLLSDM 319
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN T + L+ F + G + E Y EM+ R P + TY+ I+G+C
Sbjct: 320 IERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRL 379
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A +FE M C P++ T +TLI G + + + +LF EM +R L + Y +
Sbjct: 380 DEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + RD + A + +M + + +TY+ + GL K+ L +++ +
Sbjct: 440 IHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTM 499
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T ++++ C +V+ G L+ L +G P+ A + +++G C +G EEA
Sbjct: 500 EPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADS 559
Query: 444 CSKQM 448
K+M
Sbjct: 560 LLKKM 564
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 144/323 (44%), Gaps = 6/323 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D A +L + ++ P ++ + +LS ++K +E + ++M+ +GI
Sbjct: 65 DDAVDLFGDMVKSRP-FPSIVEFNKLLSAVAKMNKFELVISLGEQMQT---LGISH-DLY 119
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+++ + FC + ++ A +V K++ + P+ T++ LL G+ S ++ +M
Sbjct: 120 TYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQM 179
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G++P T+ I G +A+ L ++M + C P L T T+++G +I
Sbjct: 180 VEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDI 239
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A L +M K ++ D+ YN +I L + + ++ A+ L EM+ K I D TY ++
Sbjct: 240 DLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSL 299
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L +L MIE K P T L+ F ++ L+ +I R
Sbjct: 300 ISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P L+ G C R +EA
Sbjct: 360 DPDIFTYSSLINGFCMHDRLDEA 382
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 135/298 (45%), Gaps = 23/298 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEE 157
F+ DAF K ++ + +D+ ++R+ P + T S+ I+ F ++
Sbjct: 331 FSALIDAFVKEGKLVEAEKLYDEM------IKRSIDPDIFTYSSL------INGFCMHDR 378
Query: 158 TLEA---FDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
EA F+ M ++ F + + + L++ FC K ++E +F ++ R N
Sbjct: 379 LDEAKHMFELMISKDCFPNVVTYST-----LIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T L+ GF ++ D +M + +MV G P+++TYNI +DG CK G AM +FE
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
++R P + T +I G + +LF + + + P++ AYN MIS R
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A L+ +M+E ++ TY+T+ ++ E +L M F T+
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 611
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF +M K P I +N ++S++ + + L ++M+ I HD TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ S L + +M++ + P T+ L+ +C + R+ + L +++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ P L+ GL + EA QM+ R Q +Y
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
>gi|410109925|gb|AFV61042.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
hermannioides]
Length = 417
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 99/353 (28%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 77 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 133
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 134 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 185
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG C
Sbjct: 186 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLIPNGVTFTTLIDGRC 244
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++ M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 245 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 304
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 305 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 364
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 365 LSVDLKPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHAPSVVTYNVLMNG 417
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 125/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 115 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 174
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 175 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 234
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y RM+ +P T L+ C + +L +
Sbjct: 235 TFTTLIDGRCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 294
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q +
Sbjct: 295 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRS 354
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
D ++M++ + +V L P T
Sbjct: 355 ---VDAEKMLREMLSVDLKPDT 373
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/324 (21%), Positives = 136/324 (41%), Gaps = 20/324 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKT---MNILLLGFKESGDVTAMEMFYHE 237
+ ++ CT + + EA+S+ ++SR + + IL + D+
Sbjct: 8 YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFATILETKGTQRSDIYVFSGLITA 67
Query: 238 MVLRGF-RPSVVTYNIRID-------GYCKK--------GCFGDAMRLFEEMERVACLPS 281
+ GF R ++ Y + + C+K F +EE+ S
Sbjct: 68 YLESGFXRDAIECYRLTREHKLWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 127
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
L L+H +I A+ +FD + K L+P + +YN +++ IR DL+ L
Sbjct: 128 LYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 187
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + D TY + GL K S ++ +L+D M+ +P T L+ C N
Sbjct: 188 AMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGVTFTTLIDGRCKNG 247
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY- 460
RVDL + ++ ++ + P + L+ GLC +G ++A + +M ++ + + +Y
Sbjct: 248 RVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKFTYT 307
Query: 461 RMLQRYLVQANANEKLEDLDRMIK 484
++ + + + E RMI+
Sbjct: 308 TLIDGCCKEGDLDTAFEHRKRMIQ 331
>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
mitochondrial-like [Vitis vinifera]
Length = 656
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/401 (23%), Positives = 178/401 (44%), Gaps = 7/401 (1%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+ S++V ++L R+ +A + F + ++ P + L + ++ + AW
Sbjct: 176 VKSSIVFDLLVRVCCELRRADEAFKCF-YMMKEKGIVPKIETCNDMLSLFLKLNRMEMAW 234
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L + + R S T+ + +IM++ + K ++ E ME F K +N
Sbjct: 235 VLYAEMFRLRISS-TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGF----KPNVVSYNT 289
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
++ + ++ ++ AR + + + P++ T L+ G + G + + +MV G
Sbjct: 290 IIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIG 349
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P+ VTYN IDGYC KG A +EM + +PS+ T L+H + + +A
Sbjct: 350 LVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEAD 409
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ EM K+ + PD YN +I+ RC + A +L +EM K I +VTY ++ + L
Sbjct: 410 DMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVL 469
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ + ++ L++++++ P ++ C N V+ L + + P
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDE 529
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ G C G+ EEA +M R + SY L
Sbjct: 530 VTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTL 570
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 133/287 (46%), Gaps = 3/287 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+++ C + ++K+AR F+ + F PN + N ++ G+ G++ M
Sbjct: 252 FNIMVNVLCKEGKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
++G P TY I G CK+G +A LF++M + +P+ T TLI G ++
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A DEM K+ + P + YN ++ +L + A +++ EM +K I D +TY+ +
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + + L++ M+ P T L+ R+ +L+ ++D+G
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P + +V G C+ G E AF K+M + E ++ L +
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 537
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 93/408 (22%), Positives = 172/408 (42%), Gaps = 47/408 (11%)
Query: 64 LSSTLVE-NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
+SST+ N++ + KA EF F ++ F P ++ +H + + A
Sbjct: 245 ISSTVYTFNIMVNVLCKEGKLKKAREFIGF-MEGLGFKPNVVSYNTIIHGYSSRGNIEGA 303
Query: 123 WELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
++ V+ P T S+ +S + K EE FD+M + +G+ +
Sbjct: 304 RRILDAMRVKGIEPDSYTYGSL---ISGMCKEGRLEEASGLFDKM---VEIGLVP-NAVT 356
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + +++ A S +++ + P+ T N+L+ G + + EM
Sbjct: 357 YNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMR 416
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +TYNI I+GY + G A L EM P+ T T+LI+ +
Sbjct: 417 KKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMK 476
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLI------------------------------- 328
+A LF+++ + + PD+ +NAM+
Sbjct: 477 EADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLM 536
Query: 329 --RCRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
RCR+ + A L+DEM+ + I D+++Y+T+ G + ++ ++ D M+ F
Sbjct: 537 QGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFN 596
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
P T L+K C N DL L ++++G P L+ G+
Sbjct: 597 PTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/263 (21%), Positives = 116/263 (44%), Gaps = 8/263 (3%)
Query: 234 FYHEMVLRGFRPSV---VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ E+ L R SV + +++ + C+ +A + F M+ +P ++T ++
Sbjct: 163 LFDELTLSRDRLSVKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLS 222
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ + A L+ EM + + + +N M++ L + L A E + ME
Sbjct: 223 LFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKP 282
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ V+Y+T+ G +EG ++ D M P + T L+ C R++ L+
Sbjct: 283 NVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLF 342
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+++ G P+ + L+ G C++G E AF +M+ + S ++Y +L L
Sbjct: 343 DKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFME 402
Query: 471 NANEKLEDLDRMIKNL--QAVLP 491
++ + D MIK + + ++P
Sbjct: 403 G---RMGEADDMIKEMRKKGIIP 422
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/247 (22%), Positives = 103/247 (41%), Gaps = 15/247 (6%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ + + + + N+L ++ N KA + L PT + +++L
Sbjct: 411 MIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSK-GIEPTHVTYTSLIYVL 469
Query: 114 ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+R +A +L + Q P ++ +M + + E M+R
Sbjct: 470 SRRNRMKEADDLFEKILDQGVSPDVIMFNAM---VDGHCANGNVERAFMLLKEMDR---- 522
Query: 172 GIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ +E FN L+Q C + +++EAR + ++ R P++ + N L+ G+ GD+
Sbjct: 523 --KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDI 580
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM+ GF P+++TYN I CK A L +EM P T +L
Sbjct: 581 KDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 640
Query: 289 IHGAGLV 295
I G G V
Sbjct: 641 IEGMGNV 647
>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
Length = 745
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 163/344 (47%), Gaps = 6/344 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S++LS + K +E L+ ME + +++L+ C Q ++++A ++
Sbjct: 330 SVLLSSLCKRGQVDEALQLLYEMEANNL----QPDLVTYSILIHGLCKQGKVQQAIQLYK 385
Query: 203 KL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ +R PN+ + +L G E G ++ M++ +++ RP V YNI IDGY K G
Sbjct: 386 EMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLG 445
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+RL++ + A PS+ T +LI+G R + +AR+L + + L+P Y
Sbjct: 446 DVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYT 505
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++++ ++N EL+ EM K I VTY + GL K LE +L + M
Sbjct: 506 TLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAK 565
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T +++ FC + L ++ P ++L+ GLC G E+A
Sbjct: 566 GLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDA 625
Query: 442 FECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
+ R +++ +Y M++ + V+ +A ++ +M++
Sbjct: 626 DRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 131/303 (43%), Gaps = 7/303 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+IM+ K EE + + R+ ++ I I F S L+ FC +++ EAR +
Sbjct: 435 NIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNS-----LIYGFCKNRKVVEARRLL 489
Query: 202 VKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ L P+ T L+ + E G++ + EM L+ P+VVTY + I G CK+
Sbjct: 490 ESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQ 549
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
++++L E+M P T T+I +++ +A +L D+M NL+P Y
Sbjct: 550 RKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATY 609
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N +I L R D+ A ++ ++++ I V Y TM + K++ +M+E
Sbjct: 610 NVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVE 669
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
F + ++ C ++ + ++ G P ++++ G
Sbjct: 670 KGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHS 729
Query: 441 AFE 443
FE
Sbjct: 730 VFE 732
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 107/508 (21%), Positives = 202/508 (39%), Gaps = 100/508 (19%)
Query: 59 PQTTPLSSTLVENVLGR-------LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLH 111
PQ+ SS +V+ + G+ LF ++G F P+ +F +
Sbjct: 147 PQSARTSSIIVDGLCGQSRFRDAVLFLRQNDG-------------KEFAPSVVSFNTIMS 193
Query: 112 ILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
++ D A + + + L S +I++ + S EE LE + ME++
Sbjct: 194 RYCKLGLADVAKSFFCMMLK-YGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQ--- 249
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVT 229
G++ + ++ + F M AR + K+L+ P+ T +L+ G + G++
Sbjct: 250 GLQP-DMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIE 308
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+++ GF+ +V+ Y++ + CK+G +A++L EME P L T + LI
Sbjct: 309 EALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILI 368
Query: 290 HGAGLVRNIHQARQL-----------------------------------FDEMPKRNLK 314
HG + QA QL FD + NL+
Sbjct: 369 HGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLR 428
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS--------- 365
PD+ YN MI ++ D+ A+ L + +K I VT++++ +G K+
Sbjct: 429 PDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRL 488
Query: 366 ------SGLE-----------------GVCKLYDRMIE---GKFVPKTRTVVMLMKFFCV 399
GLE + KL++ ++E P T +++K C
Sbjct: 489 LESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCK 548
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+++ + L + +G P + ++ C +AFE ML+ + + A+
Sbjct: 549 QRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPAT 608
Query: 460 YRMLQRYLVQANANEKLEDLDRMIKNLQ 487
Y +L L + +ED DR++ +LQ
Sbjct: 609 YNVLIDGLCRYG---DVEDADRVLVSLQ 633
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 127/282 (45%), Gaps = 5/282 (1%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
+LQ + + +A V VK+ + P+ +T N LL + + M Y+++ G
Sbjct: 89 MLQEEVASRMVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHT---DIMWDVYNDIKDSG 145
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
S T +I +DG C + F DA+ + + PS+ + T++ + A+
Sbjct: 146 TPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAK 205
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
F M K + PD +YN +I LI + A+EL ++ME++ + D VTY + G
Sbjct: 206 SFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGF 265
Query: 363 MKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ G ++ +M+ + + P T +L+ C ++ L L L+ GF +
Sbjct: 266 HLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLN 325
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+L++ LC RG+ +EA + +M Q +Y +L
Sbjct: 326 VILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSIL 367
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/201 (21%), Positives = 94/201 (46%), Gaps = 1/201 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ V+++ C Q++++E+ + + ++ AP+ T N ++ F ++ D+ +M+
Sbjct: 539 YTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ TYN+ IDG C+ G DA R+ ++ + TT+I + +
Sbjct: 599 IHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQ 658
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++F +M ++ + I Y+A+I+ L + +N A M + D + M
Sbjct: 659 RAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMML 718
Query: 360 FGLMKSSGLEGVCKLYDRMIE 380
++ + V +L MI+
Sbjct: 719 NAFHRAGHVHSVFELLAVMIK 739
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 98/215 (45%), Gaps = 5/215 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + ++++ + K + EE+++ + M + G+ +N ++Q FC K+M++A
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAK---GLAP-DQITYNTIIQCFCKAKDMRKA 590
Query: 198 RSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ L+ P T N+L+ G GDV + + R + V Y I
Sbjct: 591 FELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKA 650
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C KG A+++F +M S++ + +I+ I++A+ F M + PD
Sbjct: 651 HCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPD 710
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ M+++ R +++ EL+ M + + HD
Sbjct: 711 QEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/171 (22%), Positives = 79/171 (46%), Gaps = 5/171 (2%)
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
R +H A + +M ++NL+P I YN+++ +L R + ++ +++++ T
Sbjct: 97 RMVHDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTS 153
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGK-FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ GL S L+ R +GK F P + +M +C D+ + + ++
Sbjct: 154 SIIVDGLCGQSRFRDAV-LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMML 212
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
G P ++ ++L+ GL G EEA E + M + Q +Y+++ +
Sbjct: 213 KYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAK 263
>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 830
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 10/344 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + L L +A EL+ +++ P++ T ++ LSR KF E
Sbjct: 305 PTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKF---EIA 361
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
+ + +M + V + +N L+ C + + A ++F +LS + P+ +T N
Sbjct: 362 IGLYHKMLADGLVPT----TVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNE 417
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ F GD+ + + +M+ G P+V+TYN I GYCK+G +AMRL E M+
Sbjct: 418 IIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNG 477
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P T T LI G + A LF M + + P+ Y A+I ++ A+
Sbjct: 478 LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDAL 537
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L +M E + TY+ M G K++ + +M++ +P T +
Sbjct: 538 ALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGL 597
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C N R L ++ + R + P+ + L+ GLC GR E+A
Sbjct: 598 CRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDA 641
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 149/348 (42%), Gaps = 12/348 (3%)
Query: 99 FTPTPDAFEKTLHILARMRY--FDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQS 154
+ P+AF T IL R D A+ + + + P+ +T ++ I+ S
Sbjct: 231 YDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTL------INGLCS 284
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
EA D +E + GI + + L + C EA + K+ R PN +
Sbjct: 285 EGRLEEAMDMLEEMVQKGIEP-TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQ 343
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T L+ G G YH+M+ G P+ VTYN I+ C +G F A +F+ M
Sbjct: 344 TFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWM 403
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
LPS QT +I L+ +I +A +FD+M K P++ YN +I + +L
Sbjct: 404 LSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNL 463
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
N AM L++ M+ + D TY + G + LE L+ M+E P T +
Sbjct: 464 NNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAI 523
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ + +VD L L+ +++ G P +++++G EA
Sbjct: 524 IDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 141/341 (41%), Gaps = 5/341 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I L + E +E +M++ V + F L+ + + A
Sbjct: 306 TVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVP----NIQTFTALISGLSRDGKFEIA 361
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ K+L+ P T N L+ G + M+ G PS TYN I
Sbjct: 362 IGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKC 421
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C G AM +F++M + P++ T TLI+G N++ A +L + M LKPD
Sbjct: 422 FCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPD 481
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y +IS R L A L M E I ++VTY + G + ++ L+
Sbjct: 482 AWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFW 541
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M+E +P ++T +++ F + N G ++ +G P+ + GLC G
Sbjct: 542 KMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNG 601
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
R AF+ +M R + +Y L L Q E E
Sbjct: 602 RTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAE 642
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 165/396 (41%), Gaps = 48/396 (12%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
PSLLT +M +L + + Q + + R + + + L+ C
Sbjct: 200 PSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYP-------NAFTYTSLILGHCRNHN 252
Query: 194 MKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYN 251
+ A ++F +++ PN+ T + L+ G G + AM+M EMV +G P+V TY
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDML-EEMVQKGIEPTVYTYT 311
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + C GC +A+ L +M++ C+P++QT T LI G A L+ +M
Sbjct: 312 IPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLAD 371
Query: 312 NLKPDIGAYNAMISSL-------------------------------IRC----RDLNAA 336
L P YNA+I+ L I+C D+ A
Sbjct: 372 GLVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKA 431
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
M + D+M + + +TY+T+ +G K L +L + M P T L+
Sbjct: 432 MVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISG 491
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
F +++ +L+ +++ G P+ ++ G + + ++A +M+ S
Sbjct: 492 FSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPS 551
Query: 457 EASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLP 491
+Y ++ + N+ + E+ +M+K Q +LP
Sbjct: 552 SQTYNVMISGFSKTNSISEAENFCGKMVK--QGLLP 585
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/451 (21%), Positives = 184/451 (40%), Gaps = 27/451 (5%)
Query: 43 HPFPD------QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQH 96
+PFP+ L +H + LS L + + + H N L FF + +
Sbjct: 45 NPFPELVSKISTILSSPKWEHSSELCHLSPKLKPHHVVNILQTHKNTDSVLRFFFWISRR 104
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F F L+ L R R F A + + ++ + +K ++ LS I+ +
Sbjct: 105 KFFKHDMSCFVSMLNRLVRDRLFAPADHVRILMIKSCRNEGEVKRVTQFLSEINSKYDFG 164
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
TL +F + + + KF + AR +++K+L S P+ T
Sbjct: 165 YTLCSFTTL----LIQLGKFDMVDL---------------ARDMYIKMLNSGIRPSLLTF 205
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ + G V ++ + P+ TY I G+C+ A +F+ M +
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T +TLI+G + +A + +EM ++ ++P + Y + SL +
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+EL+ +M+++ + T+ + GL + E LY +M+ VP T T L+
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
CV R + ++ +++ G P + ++ C G ++A +ML
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445
Query: 456 SEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ +Y ++ Y Q N N + L+ M N
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGN 476
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/358 (24%), Positives = 141/358 (39%), Gaps = 47/358 (13%)
Query: 153 QSYEETLEAFDRM-----EREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RSVFV 202
Q+Y E ++ F M IF + K GS +N L+ +C Q + A R + +
Sbjct: 413 QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEI 472
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ P+ T L+ GF G + ++ M+ G P+ VTY IDGY
Sbjct: 473 MKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAK 532
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA+ LF +M LPS QT +I G +I +A +M K+ L P++ Y +
Sbjct: 533 VDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS 592
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS---------------- 366
I L R A ++ EME++ + TY ++ +GL +
Sbjct: 593 FIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTH 652
Query: 367 ---------------GL--EGVCKLYDRMI----EGKFVPKTRTVVMLMKFFCVNFRVDL 405
GL EG C D+++ + P L+ C N +V+
Sbjct: 653 YGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVES 712
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
LN++ + GF H L+ LC EEA + ML + E ++ +L
Sbjct: 713 ALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 103/260 (39%), Gaps = 9/260 (3%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
++ ++M+S SK S E +M ++ + + + S + C A
Sbjct: 553 QTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTS-----FIDGLCRNGRTGLAF 607
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMF--YHEMVLRGFRPSVVTYNIRID 255
+F ++ R + PN T + L+ G + G EM+ + G P+V TY +
Sbjct: 608 KIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVK 667
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
G C +G +A +L M++ PS + L+ G + A +F M +
Sbjct: 668 GLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQL 727
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+ Y A+I +L + + A + M EK D V + + GL+K + KL
Sbjct: 728 HLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLCLKLL 787
Query: 376 DRMIEGKFVPKTRTVVMLMK 395
M +T VML +
Sbjct: 788 HVMESRNCTLNFQTYVMLAR 807
>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g64583, mitochondrial; Flags: Precursor
gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
Length = 512
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 94/338 (27%), Positives = 151/338 (44%), Gaps = 12/338 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F+ A+ L + + P L ++ + +L+ + + YE + +ME GI
Sbjct: 52 FEDAFALFFEMVHSQP-LPSIVDFTRLLTATANLRRYETVIYFSQKME---LYGISH-DL 106
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF---KESGDVTAMEMF 234
F +L+ FC + A SV K++ + P+ T LL GF GD ++ +
Sbjct: 107 YSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVIL 166
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
MV G+ P+VV YN IDG CK G A+ L EME+ + T TL+ G
Sbjct: 167 ---MVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCY 223
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
A ++ +M KR++ PD+ + A+I ++ +L+ A EL EM + + +NVT
Sbjct: 224 SGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVT 283
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+++ GL L K +D M P T L+ FC VD G+ L+ +
Sbjct: 284 YNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMS 343
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
GF + L+ G C G+ A + M+ RR
Sbjct: 344 CEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRR 381
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 95/424 (22%), Positives = 179/424 (42%), Gaps = 31/424 (7%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMR------YFDQAWEL--MSHVQRTHPSLL----TL 139
F + H P+ F + L A +R YF Q EL +SH + L+
Sbjct: 60 FEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTILIHCFCRC 119
Query: 140 KSMSIMLSRISKFQ--SYEETLEAFDRMER------------EIFVGIRKFGSEE----F 181
+S LS + K YE ++ F + + + + K G E +
Sbjct: 120 SRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSGYEPNVVVY 179
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ C E+ A + ++ + + T N LL G SG + +M+
Sbjct: 180 NTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAARMLRDMMK 239
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R P VVT+ ID + K+G +A L++EM + + P+ T ++I+G + ++
Sbjct: 240 RSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYD 299
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A++ FD M + P++ YN +IS + R ++ M+L M + D TY+T+
Sbjct: 300 AKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIH 359
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G + L ++ M+ + P T +L+ CVN ++ L + + +
Sbjct: 360 GYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYI 419
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
A ++++ GLC + E+A+E ++ V + +Y ++ L + + ++L
Sbjct: 420 GIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELI 479
Query: 481 RMIK 484
R +K
Sbjct: 480 RRMK 483
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 75/169 (44%), Gaps = 1/169 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC + + E +F ++ F + T N L+ G+ + G + + MV
Sbjct: 319 YNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMV 378
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R P ++T+ I + G C G A+ F++M + +IHG +
Sbjct: 379 SRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVE 438
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+A +LF +P +KPD Y MI L + A EL+ M+E+ I
Sbjct: 439 KAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKEEGI 487
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/224 (22%), Positives = 93/224 (41%), Gaps = 1/224 (0%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F DA LF EM LPS+ T L+ +R +M + D+ ++
Sbjct: 52 FEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELYGISHDLYSFTI 111
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I RC L+ A+ ++ +M + VT+ ++ G + + L M++
Sbjct: 112 LIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILMVKSG 171
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ P L+ C N +++ L L + +G + L+TGLC GRW +A
Sbjct: 172 YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRWSDAA 231
Query: 443 ECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ M+ R ++ ++ ++ Q N +E E MI++
Sbjct: 232 RMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQS 275
>gi|115473997|ref|NP_001060597.1| Os07g0671200 [Oryza sativa Japonica Group]
gi|22831126|dbj|BAC15987.1| putative crp1(chloroplast RNA processing 1) protein [Oryza sativa
Japonica Group]
gi|113612133|dbj|BAF22511.1| Os07g0671200 [Oryza sativa Japonica Group]
Length = 551
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 150/329 (45%), Gaps = 9/329 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + + F+ M+ + G F ++ ++ A+C ++ A
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYF----YSSVINAYCRAGNVRRA 267
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN T L+ GF + G + A EM +M +RG + + +N IDG
Sbjct: 268 SEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 327
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+K A+ + ME++ + T TL G + +A+ L M ++ ++P+
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387
Query: 317 IGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
+Y +IS I C D+ A L EM VTY+ M G +K + +
Sbjct: 388 HVSYTTLIS--IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M + VP + L+ CVN +VD+ L L+ + RG P+ A L++GL
Sbjct: 446 KNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 505
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
GR EEAF+ ML +A Y L
Sbjct: 506 EGRSEEAFQLYDNMLGDGLTPDDALYSAL 534
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +M EAR +F ++ A P+ T N+++ G+ + G + E F +EM
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 450
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P + +Y + G+C G A+RLFEEM++ P+L T LI G
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSL 327
+A QL+D M L PD Y+A++ SL
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSL 538
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 7/326 (2%)
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ D A +L+ + P +T S S+++ K + D M R G+ K
Sbjct: 122 HLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRH---GV-KVN 177
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ +N LL A+ +K+ + + +K++ P T IL+ G + D+T +E +
Sbjct: 178 ALCYNSLLDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM + V Y+ I+ YC+ G A +F+E P+ T LI+G +
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A L +M R + + +N MI R ++ A+E+ ME+ I D TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ GL +++ ++ L MIE P + L+ C + L+ +
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
G P ++++ G +G EA
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREA 442
>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 686
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC A+ + ++L R +PN T N L+ F + G Y EM+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TYN IDG+CK+ A +F M C P + T TTLI G + I
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EMP+R L + YN +I DLNAA++L +M + D VT +T+
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470
Query: 360 FGLMKSSGLEGVCKLYDRM-------------------------------IEGKF----- 383
GL + L+ +++ M EGKF
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ + L+ G C
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ--ANANEKLEDLDRMIKN 485
GR ++ E +M RR V++A + Y + N N L+ MI +
Sbjct: 591 KAGRVDDGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
F L+ C + + EA ++ +++ P+ T + G + GD V+A+ +
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +P+VV Y+ IDG CK G D+ LF EM+ P++ T +I G +
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A++L EM +R + P++ YNA+I++ ++ A EL DEM + I + +TY++M
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 364
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K L+ ++ M P T L+ +C R+D G+ L + RG
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
+ + L+ G C G A + S+QM+ + L L N KL+D
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD---NGKLKD 481
Query: 479 LDRMIKNLQ 487
M K +Q
Sbjct: 482 ALEMFKAMQ 490
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 159/387 (41%), Gaps = 10/387 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K + + RM D L ++R + S +I++ L
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC-DIYSFTILIKCFCSCSKLPFALS 137
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL 220
F ++ + +G+ F LL C + EA +F ++ P+ T L+
Sbjct: 138 TFGKLTK---LGLHP-DVVTFTTLLHGLCLDHRVSEALDLFHQICR---PDVLTFTTLMN 190
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL- 279
G G V MV G +P +TY +DG CK G A+ L +ME ++ +
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P++ + +I G + LF EM + + P+I YN MI +AA L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ EM E++I + VTY+ + +K +LYD M+ +P T T ++ FC
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
R+D +++ + +G P L+ G C R ++ E +M R + +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIKN 485
Y ++ + + + N L+ +MI +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISS 457
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 151/350 (43%), Gaps = 11/350 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F LH L +A +L + R P +LT ++ L R + +E
Sbjct: 149 PDVVTFTTLLHGLCLDHRVSEALDLFHQICR--PDVLTFTTLMNGLCREGR------VVE 200
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNIL 218
A ++R + G++ + + C + A ++ K+ +S PN + +
Sbjct: 201 AVALLDRMVENGLQP-DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + G + + EM +G P++VTYN I G+C G + A RL +EM
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++ T LI+ +A +L+DEM R + P+ YN+MI + L+AA +
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ M K D T+ T+ G + ++ +L M V T T L+ FC
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ ++ L+L +I G CP + L+ GLC G+ ++A E K M
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 143/354 (40%), Gaps = 50/354 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF + + EA ++ ++L R PN T N ++ GF + + A E ++ M
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V T+ IDGYC D M L EM R + + T TLIHG LV +++
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 300 QARQLFDEM----------------------------------------------PKRNL 313
A L +M P +
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ YN +I LI A EL +EM + I D +TY +M GL K S L+ +
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
++ M F P T L+ +C RVD GL L+ + RG L+ G
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
G A + ++M+ + R + L + E+LE M+++LQ
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNM---LTGFWSKEELERAVAMLEDLQ 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 18/286 (6%)
Query: 192 KEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFR 244
K +++A +F +L SR P+ N L+ G V ME Y +M + R
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLM------GAVVRMERPDLVISLYQKMERKQIR 113
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
+ ++ I I +C A+ F ++ ++ P + T TTL+HG L + +A L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F ++ +PD+ + +++ L R + A+ L+D M E + D +TY T G+ K
Sbjct: 174 FHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 365 SSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
L +M E + P ++ C + R NL+ + D+G P+
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ G C GRW A ++ML R+ + +Y L V+
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
>gi|410109931|gb|AFV61045.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
macrophylla]
Length = 431
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ V + IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVIFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + LP L T TLI+G ++ Q L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMSMKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E +M ++ I D V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKQMIQENIRLDEVAYTALISGLCQEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LNVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/374 (22%), Positives = 149/374 (39%), Gaps = 69/374 (18%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH ++ M H TH L KS+ +++SR K + +
Sbjct: 9 SPANSTFRHTLH----------SYCTMIHFLCTHQMLWEAKSLIQVVVSRKGKGSASAVF 58
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V F+ L+ A+ +++A + L+R + P
Sbjct: 59 AAILETKGTQRSDIYV---------FSGLITAYLESGFLRDAIECY--RLTREHKFWVPF 107
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK G
Sbjct: 108 DTCRKVLEHLMKLKYFKLVWG---FYKEILECGYPASLYFFNILMHRFCKDG-------- 156
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+I A+ +FD + K L+P + +YN +++ IR
Sbjct: 157 ---------------------------DIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIR 189
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
DL+ L M + D TY + GL K S ++ +L+D M+ VP
Sbjct: 190 LGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGVI 249
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C N RVDL + ++ ++ + P + L+ GLC +G ++ +M
Sbjct: 250 FTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQVHHLIDEMS 309
Query: 450 VRRRQVSEASYRML 463
++ + + +Y L
Sbjct: 310 MKGLKPDKITYTTL 323
>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
Length = 918
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 13/389 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + L M ++ AW L ++ P++ T ++ +S + +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVA 374
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMN 216
+ F RM R+ G+ + +N L+ + +K A V + L+ R +PN T N
Sbjct: 375 IGLFHRMSRD---GVFP-NTVTYNALINILVENRRIKYA-FVVLNLMGRNGCSPNIVTYN 429
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G+ GD + + M+ RG ++VTYN I GYC G A+R+ + M
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T LI G + + A LF+EM L P+ Y A+I + L+ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L++ M+ + TY+ + GL K + G +L MIE P T ++
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C N L L ++ +I++G P+ L+ L G+ EEA ++
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 457 EASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +Y +M++ Y++ L RMIK
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 36/339 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ A VF ++ PN T + L+ G +SG V EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P+ T I C GC+ DA RLF +M+ C P++ T T LI G + +
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCR---------------------------- 331
A LF M + + P+ YNA+I+ L+ R
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432
Query: 332 -------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
D AM +M+ M ++ + VTY+T+ G S ++ D M +G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + L+ FC +++ L+ ++D G CP+ L+ G C + + A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ M + + +Y +L L + N E+L +++
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C A R + + P+ + L+ GF + + + ++EMV
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY IDGYCK A L E M+R C P++QT LIHG N
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M + + P++ Y AMI L + + A+E+ ++M E+ + +TY ++
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L+ + +P T V +++ + ++ +V+ N G +I G
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 420 PHGHALDLLVTGL 432
P +L+ GL
Sbjct: 703 PTLWTYGVLIKGL 715
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C + K+A V +L R + N T N ++ G+ +SG+ T+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +Y I G+CK A LF EM P+ T T LI G +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L + M + +P++ YN +I L + + + A EL M E+ I + VTY M
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ +++++MIE +P T L++ +V+ NL+ L G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--ANEKLE 477
P ++ G+ E AF +M+ Q + +Y +L + L A+++L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 727
Query: 478 DLDRMIKN 485
L ++ N
Sbjct: 728 ALPDVVPN 735
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 1/274 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN N ++ + G+V E ++ P TY I G+C+K A+++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +M + C P+ T +TLI+G +++A L EM + P I +L
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A L +M+ K + TY + GL S L+ L+ RM P T T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ N R+ + + G P+ + ++ G C G ++A ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 450 VRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
R + +Y +++ Y N L LD M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 34/273 (12%)
Query: 119 FDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
D A L+ H++R+ P++ T + L++ + F EE + +E IF + +
Sbjct: 546 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM--IEEGIFPNVVTY 603
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFY 235
++ C A +F K++ + PN T + L+ + G V E +
Sbjct: 604 -----TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 658
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---- 291
E+ G P +TY I+ Y G A M + C P+L T LI G
Sbjct: 659 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 718
Query: 292 -----------AGLVRNIHQARQLFDE-----MPKRNLKPDIG----AYNAMISSLIRCR 331
+V N Q D+ M + + D G NA++S+L
Sbjct: 719 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 778
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
A EL+ M + + D Y+++ L++
Sbjct: 779 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 811
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 294 LVRNIHQ----ARQL--FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+++ H AR + D + + L+ + AY+A++ L R A M+ M +
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ + + Y+ + L K + + ++ E + P T T ++ C +D L
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++ + G P+ L+ GLC GR EAF+ ++M++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313
>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
Length = 836
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 87/387 (22%), Positives = 171/387 (44%), Gaps = 11/387 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P + +H L + D+A+ + ++ PSL+T S+ ++ + K + +E
Sbjct: 288 APNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLIT---YSVFINGLIKLEKIDE 344
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
M FV +N L+ +C + EA + +LS+ +PN+ T+N
Sbjct: 345 ANCVLKEMSELGFVP----NEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLN 400
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ GF +S + E EM+ RG + ++++ I+ C K F A+ EM
Sbjct: 401 SLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLR 460
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P+ +TTL+ G +A +L+ + + P+I NA+I L + ++
Sbjct: 461 NLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQET 520
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++L+ +M E+ + D +TY+T+ G K ++ +L + M++ P T +L+
Sbjct: 521 LKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHG 580
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C ++D LW G+ P+ + +++ G C + EE +++ ++ +++
Sbjct: 581 LCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELN 640
Query: 457 EASYRMLQR-YLVQANANEKLEDLDRM 482
Y L R Y + N N D M
Sbjct: 641 SVVYNSLIRAYCINGNMNAAFRLRDDM 667
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/332 (23%), Positives = 144/332 (43%), Gaps = 10/332 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
P+++T ++ + + K + +ETL+ D +ER + F +N L+ C +
Sbjct: 499 PNIVTSNAL---IHGLCKAGNMQETLKLLRDMLERGLV-----FDRITYNTLISGCCKEG 550
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
++KE + +++ + P+ T N+LL G + + +HE G+ P+V TY
Sbjct: 551 KVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYG 610
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ IDGYCK + L E+ + +LI + N++ A +L D+M R
Sbjct: 611 VMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSR 670
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
+ Y++++ L ++ A L+DEM ++ + + V Y T+ G K + V
Sbjct: 671 GVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKV 730
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ M P T +++ FC + L + ++G P + G
Sbjct: 731 NIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNG 790
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
LC G+ EEAF+ +M + E +Y L
Sbjct: 791 LCKEGKVEEAFKVCDEMSSGAVCLDEITYTTL 822
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 163/381 (42%), Gaps = 43/381 (11%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+LK+ + +LS + K +++ E +D I +G F+ ++ AFC +A
Sbjct: 220 SLKTCTFLLSSLVKANELKKSYEVYDF----ICLGGIIPDVHLFSTMINAFCKGHREDDA 275
Query: 198 RSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------ 250
+F K+ APN T N ++ G +SG + F +MV PS++TY
Sbjct: 276 IGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFING 335
Query: 251 -----------------------------NIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
N IDGYCK G +A+++ ++M P+
Sbjct: 336 LIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPN 395
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
T+ +LI G I QA + +EM R L + G+++ +I+ L A+ +
Sbjct: 396 SVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIR 455
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM + + ++ T+ GL K+ +L+ R++ FVP T L+ C
Sbjct: 456 EMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAG 515
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
+ L L +++RG + L++G C G+ +E FE ++M+ + Q ++
Sbjct: 516 NMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575
Query: 462 MLQRYLVQANANEKLEDLDRM 482
+L L A +K+++ R+
Sbjct: 576 LLLHGLCNA---DKIDEASRL 593
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ KT LL ++ ++ Y + L G P V ++ I+ +CK DA+ L
Sbjct: 219 PSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGL 278
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +ME++ P++ T +IHG + +A + ++M K + P + Y+ I+ LI+
Sbjct: 279 FSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIK 338
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A ++ EM E + V Y+T+ G K + K+ D M+ P + T
Sbjct: 339 LEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L++ FC + ++ N+ +I RG + + +++ LC + R+ A ++ML
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458
Query: 450 VRRRQVSEASYRMLQRYLVQA 470
+R + ++ L L +A
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKA 479
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/259 (23%), Positives = 109/259 (42%), Gaps = 1/259 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C + EA ++ +LL + F PN T N L+ G ++G++ +M+ RG
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+TYN I G CK+G + L EEM + P + T L+HG I +A
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L+ E K P++ Y MI + + L++E+ K++ ++V Y+++
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ + +L D M + T LM C VD +L + G P+
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711
Query: 423 HALDLLVTGLCSRGRWEEA 441
++ G G+ +
Sbjct: 712 VCYTTIIGGYSKLGQMNKV 730
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 110/267 (41%), Gaps = 6/267 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F LH L D+A L H + + + + + +M+ K EE
Sbjct: 569 PDIYTFNLLLHGLCNADKIDEASRLW-HECKKNGYVPNVYTYGVMIDGYCKANKVEEG-- 625
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
+ + E+ + S +N L++A+C M A + + SR + T + L+
Sbjct: 626 --ENLLNELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLM 683
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G G V + EM G P+VV Y I GY K G + +EM
Sbjct: 684 HGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIH 743
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T T +I G + +A +L +EM ++ + PD YNA + L + + A ++
Sbjct: 744 PNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKV 803
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSS 366
DEM + D +TY T+ G + S
Sbjct: 804 CDEMSSGAVCLDEITYTTLIDGCHQPS 830
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 88/189 (46%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
FG A +F + + PSL+T T L+ + ++ +++D + + PD+ ++
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
MI++ + + A+ L +ME+ + + VTY+ + GL KS L+ + ++M++ K
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEK 321
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T + + ++D + + + GF P+ + L+ G C G EA
Sbjct: 322 VSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEAL 381
Query: 443 ECSKQMLVR 451
+ ML +
Sbjct: 382 KIRDDMLSK 390
>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
Length = 688
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 111/456 (24%), Positives = 179/456 (39%), Gaps = 59/456 (12%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLT 138
+ + AL + + H P + + L + A L + +Q P L T
Sbjct: 233 GDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFT 292
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
SM + ++ E+ L+ + +ER+I + + N L+ AF + + EA
Sbjct: 293 YNSMIVGFCSSGRWSDAEQLLQ--EMLERKISPDVVTY-----NALINAFVKEGKFFEAA 345
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
++ ++L R PN T N ++ GF + + A E ++ M +G P V T+ IDGY
Sbjct: 346 ELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGY 405
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM--------- 308
C D M L EM R + + T TLIHG LV +++ A L +M
Sbjct: 406 CGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDI 465
Query: 309 -------------------------------------PKRNLKPDIGAYNAMISSLIRCR 331
P ++PD+ YN +I LI
Sbjct: 466 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEG 525
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A EL +EM + I D +TY +M GL K S L+ +++ M F P T
Sbjct: 526 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFN 585
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +C RVD GL L+ + RG L+ G G A + ++M+
Sbjct: 586 TLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 645
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
+ R + L + E+LE M+++LQ
Sbjct: 646 GVYPDTITIRNM---LTGFWSKEELERAVAMLEDLQ 678
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 164/388 (42%), Gaps = 8/388 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K + ++ RM D L ++R + S +I++ L
Sbjct: 77 PSVVDFCKLMGVVVRMERPDLVISLYQKMERKQIRC-DIYSFNILIKCFCSCSKLPFALS 135
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILL 219
F ++ + +G+ F LL C + + EA F ++ PN T L+
Sbjct: 136 TFGKITK---LGLHP-DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLM 191
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-C 278
G G + M+ G +P+ +TY +DG CKKG A+ L +ME V+
Sbjct: 192 NGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHI 251
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+P++ + +I A+ LF EM ++ + PD+ YN+MI + A +
Sbjct: 252 IPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQ 311
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L+ EM E++I D VTY+ + +K +LYD M+ +P T T ++ FC
Sbjct: 312 LLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFC 371
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
R+D +++ + +G P L+ G C R ++ E +M R +
Sbjct: 372 KQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTV 431
Query: 459 SYR-MLQRYLVQANANEKLEDLDRMIKN 485
+Y ++ + + + N L+ +MI +
Sbjct: 432 TYNTLIHGFCLVGDLNAALDLSQQMISS 459
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 96/383 (25%), Positives = 163/383 (42%), Gaps = 14/383 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFF-KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
N+L + F + S AL F K T H P F LH L +A + +
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLH--PDVVTFTTLLHGLCVEDRVSEALDFFHQM 175
Query: 130 QRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
T P+++T ++ L R + E + DRM + G++ + ++
Sbjct: 176 FETTCRPNVVTFTTLMNGLCREGRIV---EAVALLDRMMED---GLQP-TQITYGTIVDG 228
Query: 188 FCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + + A ++ K+ +S PN + ++ + G + + + EM +G P
Sbjct: 229 MCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFP 288
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
+ TYN I G+C G + DA +L +EM P + T LI+ +A +L+
Sbjct: 289 DLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELY 348
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
DEM R + P+ YN+MI + L+AA ++ M K D T+ T+ G +
Sbjct: 349 DEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGA 408
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ +L M V T T L+ FC+ ++ L+L +I G CP
Sbjct: 409 KRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 468
Query: 426 DLLVTGLCSRGRWEEAFECSKQM 448
+ L+ GLC G+ ++A E K M
Sbjct: 469 NTLLDGLCDNGKLKDALEMFKAM 491
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 26/344 (7%)
Query: 145 MLSRISKFQSYEETLEAFDRM--EREIFVGIRK---------FGSEEFNVLLQAFCTQKE 193
ML+R+ F+ E+ R+ R I + K FG E L F K
Sbjct: 1 MLARVCGFKCSSSPAESAARLFCTRSIRDTLAKASGESCEAGFGGESLK-LQSGFHEIKG 59
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFRPS 246
+++A +F +L SR P+ L+ G V ME Y +M + R
Sbjct: 60 LEDAIDLFSDMLRSRPLPSVVDFCKLM------GVVVRMERPDLVISLYQKMERKQIRCD 113
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++NI I +C A+ F ++ ++ P + T TTL+HG + + +A F
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + +P++ + +++ L R + A+ L+D M E + +TY T+ G+ K
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233
Query: 367 GLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E +P ++ C + R NL+ + ++G P
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ G CS GRW +A + ++ML R+ +Y L V+
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337
>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
Length = 695
Score = 118 bits (296), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/343 (24%), Positives = 156/343 (45%), Gaps = 6/343 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ SKF E+ F M+R+ V F+ + AFC + ++EA +F ++
Sbjct: 276 LINCFSKFGRMEKAYSYFGEMKRQGVVA----NVVTFSTFVDAFCKEGLVQEAMKLFAQM 331
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
R PN T L+ G ++G + + EMV +G P+VVTY + +DG CK+G
Sbjct: 332 RVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKV 391
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + MER + TTLIHG + N +A L ++M + ++ D+ Y +
Sbjct: 392 AEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTL 451
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + + ++ A L+ +M + + V Y T+ L K+ L ++++ F
Sbjct: 452 IWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGF 511
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T L+ C + ++ + + + G P+ A L+ G C G +A
Sbjct: 512 QPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMH 571
Query: 444 CSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
+M+ + + + Y ++ Y+ QAN + +MI++
Sbjct: 572 LMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIES 614
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 4/279 (1%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R PN +T N +LL + + + + + P+V T+NI ID CK+G +A
Sbjct: 164 RVPPNTRTCNHILLRLARNRQGGLVRRLFDLLPV----PNVFTFNIVIDFLCKEGELVEA 219
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
LF M+ + C P + T +LI G G ++ + QL EM K D+ YNA+I+
Sbjct: 220 RALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINC 279
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ + A EM+ + + + VT+ T K ++ KL+ +M +P
Sbjct: 280 FSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C R+D + L ++ +G P+ ++V GLC G+ EA
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
M + +E Y L N +E+ DL +KN
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKN 438
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 150/348 (43%), Gaps = 14/348 (4%)
Query: 97 PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQS 154
P + P + L +LA D A ++ V+ R P+ T + + L+R +
Sbjct: 128 PRRSALPSVVDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQ--- 184
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
+ R +F + FN+++ C + E+ EAR++FV++ + +P+
Sbjct: 185 --------GGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVV 236
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G+ + GD+ +E EM G VVTYN I+ + K G A F EM
Sbjct: 237 TYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEM 296
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+R + ++ T +T + + +A +LF +M R + P+ Y +++ + L
Sbjct: 297 KRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRL 356
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A+ L+DEM + + + VTY M GL K + + M G L
Sbjct: 357 DDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTL 416
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +N + L+L + ++G L+ GLC + +EA
Sbjct: 417 IHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEA 464
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 93/206 (45%), Gaps = 1/206 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C +++ EA+S+ K+ PN ++ ++G + H+++
Sbjct: 448 YGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKIL 507
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF+P+VVTY IDG CK G +A+ F +M + P++Q T LI G + +++
Sbjct: 508 DSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLN 567
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +EM + + D Y ++I ++ +L A L +M E + D Y
Sbjct: 568 KAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFI 627
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVP 385
G + ++ + MI P
Sbjct: 628 SGFCNMNMMQEARGVLSEMIGTGITP 653
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 114/284 (40%), Gaps = 24/284 (8%)
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMR----------YFDQAWELMSHVQR 131
G+KA E TL H HF E+ L +L +M+ Y W L +
Sbjct: 404 GGVKANELLYTTLIHGHFMNNNS--ERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKV 461
Query: 132 THP-SLL------TLKSMSIMLSRI--SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
SLL L+ +++ + I + F++ +E+ EA + + + G + +
Sbjct: 462 DEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKES-EAVALLHKILDSGFQP-NVVTYC 519
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ C + EA S F K+ PN + L+ GF + G + +EM+ +
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G V Y IDGY K+ DA L +M L T I G + + +A
Sbjct: 580 GMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEA 639
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
R + EM + PD YN +I + ++ A L +EME
Sbjct: 640 RGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMES 683
>gi|255564599|ref|XP_002523294.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223537382|gb|EEF39010.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 544
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 111/485 (22%), Positives = 200/485 (41%), Gaps = 41/485 (8%)
Query: 16 ISDRLALLFSTTTQSSEIERITRII----NDHPFPDQPLHPTLLQHLPQTTPLSSTLVEN 71
++ R +L ST QS + T + N P+ PL P P P L
Sbjct: 6 VTGRTTMLCST--QSRHRPKTTAVALLHSNSTGSPNNPL-PESYTVTPPIKPWPQRLYPK 62
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQH-PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
L + N AL+ F++ ++ P+F+ D ++ +H L+R R F L+S +
Sbjct: 63 RLVSMITRQQNLDLALQIFEYAGKYQPNFSHNYDTYDSIIHKLSRARVFGPVELLLSDLH 122
Query: 131 RTHPSLLTLKSMSIMLS---------------RISKF------QSYEETLEAFDRMER-- 167
++ ++++ + RI F +S L AF + +R
Sbjct: 123 KSQIKCGENIFINVIRNYGLAGKPDFALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYD 182
Query: 168 ---EIFVGIR-KFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNIL 218
+F R K+G N+L++A C + +++ A V ++ + PN T +
Sbjct: 183 LVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTI 242
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L G+ GD+ + E+ RG+ P TY I ++GYC++G DA++L ++M
Sbjct: 243 LGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRLADAIKLMDDMGENGV 302
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+ T ++ + +AR L D+M +R P +I L + A E
Sbjct: 303 EPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACE 362
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L M +K DN T+ L K + KL+ G +P T L+ C
Sbjct: 363 LWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGA-IPSLLTYNTLIAGMC 421
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+ LW ++++G+ P+ ++L+ G G +E ++ML R +++
Sbjct: 422 EKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKS 481
Query: 459 SYRML 463
+Y +L
Sbjct: 482 TYAIL 486
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/325 (21%), Positives = 136/325 (41%), Gaps = 41/325 (12%)
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
L+ + + +D + + + + L + + +I++ + K E ++ D M
Sbjct: 172 LNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILIKALCKKNDVESAVKVLDEMPAMG 231
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ + +L + ++ +M A VF +L R + P+ T IL+ G+ E G +
Sbjct: 232 MIP----NVVTYTTILGGYSSRGDMVNANKVFGELFDRGWLPDATTYTILMNGYCEQGRL 287
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ER------------ 275
+M G P+ VTY + ++ YCK+ G+A L ++M ER
Sbjct: 288 ADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKV 347
Query: 276 ----------------------VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C+P ++TLIH + +AR+LF E +R
Sbjct: 348 IDVLCEAGKIEEACELWKRMLKKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEF-ERGA 406
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
P + YN +I+ + +L+ A +L D+M EK + TY+ + G K + +
Sbjct: 407 IPSLLTYNTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIR 466
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFC 398
+ + M++ + +P T +L++ C
Sbjct: 467 ILEEMLDNRCMPNKSTYAILIEELC 491
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 96/191 (50%), Gaps = 3/191 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ V+++A+C +K+ EAR++ +L R + P++ ++ E+G + + M+
Sbjct: 309 YGVMVEAYCKEKKAGEARNLLDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRML 368
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P + I CK+G +A +LF E ER A +PSL T TLI G +
Sbjct: 369 KKNCMPDNAIMSTLIHWLCKEGKVWEARKLFGEFERGA-IPSLLTYNTLIAGMCEKGELS 427
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+D+M ++ KP+ YN +I + + + +++EM + R + TY +
Sbjct: 428 EAGKLWDDMMEKGYKPNAFTYNMLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILI 487
Query: 360 FGLMKSSGLEG 370
L K G+EG
Sbjct: 488 EELCK-MGMEG 497
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 95/221 (42%), Gaps = 2/221 (0%)
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM-PKRNLKPDIGAYNAMI 324
A+R F ++ S++++ TL++ + +F K + P++ N +I
Sbjct: 149 ALRTFIRIQDFNVQRSVRSLNTLLNAFVQNKRYDLVHAMFKNCRSKYGVLPNVFTCNILI 208
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+L + D+ +A++++DEM + + VTY T+ G + K++ + + ++
Sbjct: 209 KALCKKNDVESAVKVLDEMPAMGMIPNVVTYTTILGGYSSRGDMVNANKVFGELFDRGWL 268
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +LM +C R+ + L + + G P+ ++V C + EA
Sbjct: 269 PDATTYTILMNGYCEQGRLADAIKLMDDMGENGVEPNEVTYGVMVEAYCKEKKAGEARNL 328
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLEDLDRMIK 484
ML R+ S A + L +A E E RM+K
Sbjct: 329 LDDMLERQYVPSSALCCKVIDVLCEAGKIEEACELWKRMLK 369
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 7/173 (4%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+ P+ K + +L ++A EL + + + + MS ++ + K E
Sbjct: 336 QYVPSSALCCKVIDVLCEAGKIEEACELWKRMLKKN-CMPDNAIMSTLIHWLCKEGKVWE 394
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ F ER + + N L+ C + E+ EA ++ ++ + + PN T N
Sbjct: 395 ARKLFGEFERGAIPSLLTY-----NTLIAGMCEKGELSEAGKLWDDMMEKGYKPNAFTYN 449
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+L+ GF + G+ EM+ P+ TY I I+ CK G G+ ++
Sbjct: 450 MLIKGFSKIGNAKEGIRILEEMLDNRCMPNKSTYAILIEELCKMGMEGEVDKV 502
>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
Length = 1007
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/389 (25%), Positives = 166/389 (42%), Gaps = 13/389 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + L M ++ AW L ++ P++ T ++ +S + +
Sbjct: 318 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVA 374
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMN 216
+ F RM R+ G+ + +N L+ + +K A V + L+ R +PN T N
Sbjct: 375 IGLFHRMSRD---GVFP-NTVTYNALINILVENRRIKYA-FVVLNLMGRNGCSPNIVTYN 429
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G+ GD + + M+ RG ++VTYN I GYC G A+R+ + M
Sbjct: 430 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 489
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T LI G + + A LF+EM L P+ Y A+I + L+ A
Sbjct: 490 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 549
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L++ M+ + TY+ + GL K + G +L MIE P T ++
Sbjct: 550 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 609
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C N L L ++ +I++G P+ L+ L G+ EEA ++
Sbjct: 610 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 669
Query: 457 EASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +Y +M++ Y++ L RMIK
Sbjct: 670 EITYVKMIEAYIMSGKVEHAFNFLGRMIK 698
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 36/339 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ A VF ++ PN T + L+ G +SG V EM+
Sbjct: 253 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 312
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P+ T I C GC+ DA RLF +M+ C P++ T T LI G + +
Sbjct: 313 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 372
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCR---------------------------- 331
A LF M + + P+ YNA+I+ L+ R
Sbjct: 373 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMI 432
Query: 332 -------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
D AM +M+ M ++ + VTY+T+ G S ++ D M +G
Sbjct: 433 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 492
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + L+ FC +++ L+ ++D G CP+ L+ G C + + A
Sbjct: 493 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 552
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ M + + +Y +L L + N E+L +++
Sbjct: 553 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 591
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C A R + + P+ + L+ GF + + + ++EMV
Sbjct: 463 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 522
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY IDGYCK A L E M+R C P++QT LIHG N
Sbjct: 523 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 582
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M + + P++ Y AMI L + + A+E+ ++M E+ + +TY ++
Sbjct: 583 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 642
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L+ + +P T V +++ + ++ +V+ N G +I G
Sbjct: 643 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 702
Query: 420 PHGHALDLLVTGL 432
P +L+ GL
Sbjct: 703 PTLWTYGVLIKGL 715
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C + K+A V +L R + N T N ++ G+ +SG+ T+ M
Sbjct: 428 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 487
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +Y I G+CK A LF EM P+ T T LI G +
Sbjct: 488 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 547
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L + M + +P++ YN +I L + + + A EL M E+ I + VTY M
Sbjct: 548 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 607
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ +++++MIE +P T L++ +V+ NL+ L G
Sbjct: 608 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 667
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--ANEKLE 477
P ++ G+ E AF +M+ Q + +Y +L + L A+++L
Sbjct: 668 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 727
Query: 478 DLDRMIKN 485
L ++ N
Sbjct: 728 ALPDVVPN 735
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 107/274 (39%), Gaps = 1/274 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN N ++ + G+V E ++ P TY I G+C+K A+++
Sbjct: 213 PNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQV 272
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +M + C P+ T +TLI+G +++A L EM + P I +L
Sbjct: 273 FNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCD 332
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A L +M+ K + TY + GL S L+ L+ RM P T T
Sbjct: 333 MGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVT 392
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ N R+ + + G P+ + ++ G C G ++A ML
Sbjct: 393 YNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNML 452
Query: 450 VRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
R + +Y +++ Y N L LD M
Sbjct: 453 QRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 112/282 (39%), Gaps = 52/282 (18%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + +H L + F A EL + + P+++T +M + + K S
Sbjct: 563 PNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM---IDGLCKNGSTSLA 619
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
LE F++M E+ + + S L++A + +++EA ++F +L P+ T
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSS-----LIRALGQEGKVEEAENLFAELERHGLIPDEITYV 674
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ + SG V F M+ G +P++ TY + I G + D +R+
Sbjct: 675 KMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLAD--------QRL 726
Query: 277 ACLP--------------------------------SLQTITTLIHGAGLVRNIHQARQL 304
A LP S+Q L+ +A +L
Sbjct: 727 AALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANEL 786
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
M + L PD AYN+++ SL+R R+++ AM + M +
Sbjct: 787 LGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQ 828
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 72/163 (44%), Gaps = 6/163 (3%)
Query: 294 LVRNIHQ----ARQL--FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+++ H AR + D + + L+ + AY+A++ L R A M+ M +
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ + + Y+ + L K + + ++ E + P T T ++ C +D L
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++ + G P+ L+ GLC GR EAF+ ++M++
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMIL 313
>gi|255660834|gb|ACU25586.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 418
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 154/342 (45%), Gaps = 19/342 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECYRLTREHKFRVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F IRK+G FN L+ + Q ++ + R
Sbjct: 142 LMHRFCK--------EGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F EM+ +G P+ VT+ IDG+C
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELF-XEMLDKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QAR L +EM + LKPD
Sbjct: 253 KNGKVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A E M E+ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGSCKDGDLETAFEYRKRMIEENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ P + T M++ FC V G L + G P
Sbjct: 373 LSVGLKPDSGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVP 414
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 127/284 (44%), Gaps = 36/284 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ FC + E++ ++SVF + P+ + N L+ G+ GD+ M
Sbjct: 139 FNILMHRFCKEGEIRLSQSVFDAIRKWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMH 198
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P V TY++ I+G CK+ +A LF EM +P+ T TTLI G +
Sbjct: 199 ASGVQPDVYTYSVLINGLCKESKMDEANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVD 258
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +++ +M ++L PD+ YN +I L + DL A L++EM K + D +TY T+
Sbjct: 259 LAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLI 318
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K LE + RMIE N R+D
Sbjct: 319 DGSCKDGDLETAFEYRKRMIEE------------------NIRLD--------------- 345
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
A L++GLC GR +A + ++ML + +Y M+
Sbjct: 346 --DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMI 387
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 90/399 (22%), Positives = 173/399 (43%), Gaps = 27/399 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH LL K++ I++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLLEAKTLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKT 214
LE +I+V F+ L+ A+ +++A + + +F T
Sbjct: 53 AAILETKGTQRSDIYV---------FSGLITAYLESGFLRDAIECYRLTREHKFRVPFDT 103
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+L + + FY E++ G+ S+ +NI + +CK+G + +F+ +
Sbjct: 104 CRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEIRLSQSVFDAIR 163
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ PS+ + TL++G ++ + +L M ++PD+ Y+ +I+ L + ++
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMD 223
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL EM +K + + VT+ T+ G K+ ++ ++Y +M+ P T L+
Sbjct: 224 EANELFXEMLDKGLVPNGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + NL + +G P L+ G C G E AFE K+M+ +
Sbjct: 284 YGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIEENIR 343
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ + +Y L L Q + D ++M++ + +V P
Sbjct: 344 LDDVAYTALISGLCQEGRS---VDAEKMLREMLSVGLKP 379
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ R D+ + L S H P + T S++++ + K +E
Sbjct: 169 PSVVSFNTLMNGYIRQGDLDKGFRLKSAMHASGVQPDVYTY---SVLINGLCKESKMDEA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E F M + V G+ F L+ C ++ A ++ ++LS+ +P+ T
Sbjct: 226 NELFXEMLDKGLVPNGV------TFTTLIDGHCKNGKVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ +EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMIE 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGHVPSV 416
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 59/140 (42%), Gaps = 36/140 (25%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV----------- 228
+N L+ C + ++K+AR++ ++ + P+ T L+ G + GD+
Sbjct: 279 YNTLIYGLCKKGDLKQARNLINEMSMKGLKPDKITYTTLIDGSCKDGDLETAFEYRKRMI 338
Query: 229 -----------TAM-------------EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
TA+ E EM+ G +P TY + I+ +CKKG
Sbjct: 339 EENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDSGTYTMIINEFCKKGDVW 398
Query: 265 DAMRLFEEMERVACLPSLQT 284
+L +EM+R +PS+ T
Sbjct: 399 TGSKLLKEMQRDGHVPSVVT 418
>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 716
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 133/272 (48%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C K + +A +F +++ R P+ T+ L+ G+ + G++T + M
Sbjct: 437 YNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMT 496
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
LR +P VVTYN +DG+CK G A L+ +M PS + + LI+G + +
Sbjct: 497 LRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVS 556
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L+DEM ++ +KP + N +I +R +L+ A + ++ M + + D +TY+T+
Sbjct: 557 EAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLI 616
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+K + L + M E +P T ++ F + R+ + +ID+G
Sbjct: 617 NSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGIN 676
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P L+ G S+ +EAF +ML R
Sbjct: 677 PDKSTYTSLINGYVSKDNMKEAFRVHDEMLQR 708
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 184/423 (43%), Gaps = 34/423 (8%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK-- 151
L+ F + +A L + ++ + D AW++ ++ +++ + +++IM++ + K
Sbjct: 180 LRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSG-NIVNVYTLNIMVNALCKDG 238
Query: 152 --------------------FQSYEETLEAFDR--MEREIFVGIR-------KFGSEEFN 182
+Y + A+ R + E F + K G +N
Sbjct: 239 KLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYN 298
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ C + + A+ V ++L PN T N +L+ DV E ++EM+ R
Sbjct: 299 ALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQR 358
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P +++++ + + + G G A+ FE+M+ V +P T LI+G ++ A
Sbjct: 359 GVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGA 418
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++ +EM +R D+ YN +++ L R + L+ A EL EM E+ + D T T+ G
Sbjct: 419 LKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHG 478
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K + L++ M P T LM FC ++ LW +I R P
Sbjct: 479 YCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPS 538
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLD 480
+ +L+ G CS G EAF +M + + + + +++ YL N ++ + L+
Sbjct: 539 YISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLN 598
Query: 481 RMI 483
MI
Sbjct: 599 TMI 601
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 76/322 (23%), Positives = 149/322 (46%), Gaps = 8/322 (2%)
Query: 102 TPDAFEKTLHILARMRYFDQAWEL-MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PD T+ I R D + L M + ++ + + + +L+ + + + ++ E
Sbjct: 396 VPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADE 455
Query: 161 AFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNIL 218
F M ER +F + L+ +C M +A S+F + L P+ T N L
Sbjct: 456 LFKEMVERGVFPDFYTLTT-----LIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF + G++ + +++M+ R PS ++++I I+G+C G +A RL++EM+
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGI 570
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+L T T+I G N+ +A + M + PD YN +I+S ++ + + A
Sbjct: 571 KPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFF 630
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L++ MEE+ + + VTY+ + G + ++ + +MI+ P T L+ +
Sbjct: 631 LINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYV 690
Query: 399 VNFRVDLGLNLWGYLIDRGFCP 420
+ + ++ RGF P
Sbjct: 691 SKDNMKEAFRVHDEMLQRGFVP 712
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 141/341 (41%), Gaps = 37/341 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+ ++ F E+ A + F K+ P+ IL+ G+ + DV+ +EMV
Sbjct: 367 FSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMV 426
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VVTYN ++G C+ DA LF+EM P T+TTLIHG N+
Sbjct: 427 ERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMT 486
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM------------------- 340
+A LF+ M R+LKPD+ YN ++ + ++ A EL
Sbjct: 487 KALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILI 546
Query: 341 ----------------DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
DEM+EK I VT +T+ G +++ L + MI
Sbjct: 547 NGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVP 606
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ F D L + +RG P+ + ++ G GR +EA
Sbjct: 607 PDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMV 666
Query: 445 SKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
+M+ + +++Y ++ Y+ + N E D M++
Sbjct: 667 LHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 94/433 (21%), Positives = 175/433 (40%), Gaps = 55/433 (12%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
+P P +H L + + +A L+ + R + ++ + ++S S + + +
Sbjct: 96 SPNPSIIATLIHFLVQSKKLPEAQSLLLRIIR-KSGVSHVEVIDSLISTSSSNLNSNQNV 154
Query: 160 EAFDRMEREIFVGIRKF--GSEEF---------------NVLLQAFCTQKEMKEARSVFV 202
FD + R +V RK GSE F N LL A + A V+
Sbjct: 155 VVFDLLIRT-YVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213
Query: 203 KLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ S N T+NI++ + G + + ++ EM +G +VTYN ++ YC++G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIH-------------------GAGLVRN----- 297
+A L + M P L T LI+ G GL N
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333
Query: 298 -----------IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+ +A ++F+EM +R + PD+ ++++++ R +L A+ ++M+
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ D V Y + G ++ + G K+ + M+E V T L+ C +D
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L+ +++RG P + L L+ G C G +A + M +R + +Y L
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDG 513
Query: 467 LVQANANEKLEDL 479
+ EK ++L
Sbjct: 514 FCKVGEMEKAKEL 526
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/243 (22%), Positives = 101/243 (41%), Gaps = 11/243 (4%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHP 134
+ N KAL F+ T+ P + + ++ ++A EL + + P
Sbjct: 479 YCKDGNMTKALSLFE-TMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFP 537
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
S + S SI+++ E +D M+ + GI+ N +++ + +
Sbjct: 538 SYI---SFSILINGFCSLGLVSEAFRLWDEMKEK---GIKP-TLVTCNTIIKGYLRAGNL 590
Query: 195 KEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+A ++S P+ T N L+ F + + + M RG P++VTYN
Sbjct: 591 SKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAI 650
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
+ G+ + G +A + +M P T T+LI+G N+ +A ++ DEM +R
Sbjct: 651 LGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGF 710
Query: 314 KPD 316
PD
Sbjct: 711 VPD 713
>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
Length = 683
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 145/354 (40%), Gaps = 50/354 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ FC A+ + ++L R +PN T N L+ F + G Y EM+
Sbjct: 291 YNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEML 350
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ +TYN IDG+CK+ A +F M C P + T TTLI G + I
Sbjct: 351 PRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRID 410
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L EMP+R L + YN +I DLNAA++L +M + D VT +T+
Sbjct: 411 DGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLL 470
Query: 360 FGLMKSSGLEGVCKLYDRM-------------------------------IEGKF----- 383
GL + L+ +++ M EGKF
Sbjct: 471 DGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEE 530
Query: 384 ----------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
VP T T ++ C R+D ++ + + F P+ + L+ G C
Sbjct: 531 LYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYC 590
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ--ANANEKLEDLDRMIKN 485
GR ++ E +M RR V++A + Y + N N L+ MI +
Sbjct: 591 KAGRVDDGLELFCEM-GRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISS 643
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/309 (26%), Positives = 139/309 (44%), Gaps = 5/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
F L+ C + + EA ++ +++ P+ T + G + GD V+A+ +
Sbjct: 185 FTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKME 244
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +P+VV Y+ IDG CK G D+ LF EM+ P++ T +I G +
Sbjct: 245 EISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRW 304
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A++L EM +R + P++ YNA+I++ ++ A EL DEM + I + +TY++M
Sbjct: 305 SAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSM 364
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K L+ ++ M P T L+ +C R+D G+ L + RG
Sbjct: 365 IDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGL 424
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
+ + L+ G C G A + S+QM+ + L L N KL+D
Sbjct: 425 VANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD---NGKLKD 481
Query: 479 LDRMIKNLQ 487
M K +Q
Sbjct: 482 ALEMFKAMQ 490
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 90/387 (23%), Positives = 159/387 (41%), Gaps = 10/387 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K + + RM D L ++R + S +I++ L
Sbjct: 79 PSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRC-DIYSFTILIKCFCSCSKLPFALS 137
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL 220
F ++ + +G+ F LL C + EA +F ++ P+ T L+
Sbjct: 138 TFGKLTK---LGLHP-DVVTFTTLLHGLCLDHRVSEALDLFHQICR---PDVLTFTTLMN 190
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL- 279
G G V MV G +P +TY +DG CK G A+ L +ME ++ +
Sbjct: 191 GLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIK 250
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P++ + +I G + LF EM + + P+I YN MI +AA L
Sbjct: 251 PNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRL 310
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ EM E++I + VTY+ + +K +LYD M+ +P T T ++ FC
Sbjct: 311 LQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCK 370
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
R+D +++ + +G P L+ G C R ++ E +M R + +
Sbjct: 371 QDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVT 430
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIKN 485
Y ++ + + + N L+ +MI +
Sbjct: 431 YNTLIHGFCLVGDLNAALDLSQQMISS 457
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/350 (25%), Positives = 151/350 (43%), Gaps = 11/350 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F LH L +A +L + R P +LT ++ L R + +E
Sbjct: 149 PDVVTFTTLLHGLCLDHRVSEALDLFHQICR--PDVLTFTTLMNGLCREGR------VVE 200
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNIL 218
A ++R + G++ + + C + A ++ K+ +S PN + +
Sbjct: 201 AVALLDRMVENGLQP-DQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAI 259
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + G + + EM +G P++VTYN I G+C G + A RL +EM
Sbjct: 260 IDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKI 319
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++ T LI+ +A +L+DEM R + P+ YN+MI + L+AA +
Sbjct: 320 SPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAED 379
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ M K D T+ T+ G + ++ +L M V T T L+ FC
Sbjct: 380 MFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFC 439
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ ++ L+L +I G CP + L+ GLC G+ ++A E K M
Sbjct: 440 LVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 143/354 (40%), Gaps = 50/354 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF + + EA ++ ++L R PN T N ++ GF + + A E ++ M
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V T+ IDGYC D M L EM R + + T TLIHG LV +++
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445
Query: 300 QARQLFDEM----------------------------------------------PKRNL 313
A L +M P +
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGV 505
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ YN +I LI A EL +EM + I D +TY +M GL K S L+ +
Sbjct: 506 EPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 565
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
++ M F P T L+ +C RVD GL L+ + RG L+ G
Sbjct: 566 MFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFR 625
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
G A + ++M+ + R + L + E+LE M+++LQ
Sbjct: 626 KVGNINGALDIFQEMISSGVYPDTITIRNM---LTGFWSKEELERAVAMLEDLQ 676
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 124/286 (43%), Gaps = 18/286 (6%)
Query: 192 KEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAME------MFYHEMVLRGFR 244
K +++A +F +L SR P+ N L+ G V ME Y +M + R
Sbjct: 60 KGLEDAIDLFSDMLRSRPLPSVIDFNKLM------GAVVRMERPDLVISLYQKMERKQIR 113
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
+ ++ I I +C A+ F ++ ++ P + T TTL+HG L + +A L
Sbjct: 114 CDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDL 173
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F ++ +PD+ + +++ L R + A+ L+D M E + D +TY T G+ K
Sbjct: 174 FHQI----CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCK 229
Query: 365 SSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
L +M E + P ++ C + R NL+ + D+G P+
Sbjct: 230 MGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ G C GRW A ++ML R+ + +Y L V+
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 1/137 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C Q + EA +FV + S+ F+PN T N L+ G+ ++G V + EM
Sbjct: 547 YSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMG 606
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG + Y I G+ K G A+ +F+EM P TI ++ G +
Sbjct: 607 RRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELE 666
Query: 300 QARQLFDEMPKRNLKPD 316
+A + +++ + L+ +
Sbjct: 667 RAVAMLEDLQRYQLEDE 683
>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
Length = 719
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/394 (24%), Positives = 169/394 (42%), Gaps = 19/394 (4%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---W-ELMSHVQRTHPSLLTL 139
L+A F L+ + P + +H L M F +A W E+M + P+ T
Sbjct: 315 LEAYRVFN-DLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMD--KGMQPNAYTY 371
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEA 197
+M L K +E E ++ M + +G+ N ++ C++ + EA
Sbjct: 372 NTM---LHGSLKSGDFERACELYNEMCN------KGYGTTTVTCNKIISELCSRGKSDEA 422
Query: 198 RSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF K+ + + T N L+ GF + G V +E+V + +PSV Y + I
Sbjct: 423 FEVFKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIK 482
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
CK G F A RL +M P+ T T++HG+ + R+L++E +
Sbjct: 483 SCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTT 542
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
N +IS L + A E+ +M E I D +TY+++ G K + L +
Sbjct: 543 TATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLN 602
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
++ P + L+ C N + LWG ++ +G PH + + L++GLC +G
Sbjct: 603 ELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQG 662
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
R E + ML + + +A++ L L+Q+
Sbjct: 663 RATEGMDRLMGMLENKIKPKKAAFEDLAECLIQS 696
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 156/359 (43%), Gaps = 6/359 (1%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KA+ K F P + E+ + L + + ++A E+ ++ + + SI
Sbjct: 138 KAVRAAKMVRDIAGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSI 197
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGI-RKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
LS K E E + M I G +E L+QAFC ++ + +
Sbjct: 198 -LSGCLKAGKTELLFEFYQEM---IKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQ 253
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
L + P N T N L+ GF ++ + +M H M+ R P++ TY I+G CK
Sbjct: 254 FLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEE 313
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A R+F +++ P TT+IHG + + +AR+L+ EM + ++P+ YN
Sbjct: 314 CLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNT 373
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M+ ++ D A EL +EM K G VT + + L + +++ +M E
Sbjct: 374 MLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETG 433
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T L++ FC +VD +NL L+ + P +LL+ C G +E A
Sbjct: 434 IQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAA 492
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 85/393 (21%), Positives = 164/393 (41%), Gaps = 21/393 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELM-SHVQRTH-PSLLTLKSMSIMLSRISKFQSYEET 158
P + K + + + + E++ + + R H P++ T + + I+ EE
Sbjct: 261 PGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEI------INGLCKNEEC 314
Query: 159 LEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
LEA+ +F ++ G + ++ C EAR ++ +++ + PN
Sbjct: 315 LEAY-----RVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAY 369
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N +L G +SGD Y+EM +G+ + VT N I C +G +A +F++M
Sbjct: 370 TYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKM 429
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
T +LI G + + L +E+ ++ +P + Y +I + D
Sbjct: 430 SETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDF 489
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
AA L+ +M K + + TY TM G +KS E V +LY+ + T T +
Sbjct: 490 EAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKI 549
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ C + D ++ + + G + L+ G C G+ ++ +++ +
Sbjct: 550 ISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGL 609
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
Q S +SY L ++Q N E R+ ++
Sbjct: 610 QPSASSYASL---IIQLCQNGDAESAKRLWGDM 639
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/421 (22%), Positives = 171/421 (40%), Gaps = 24/421 (5%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
L A +N L +L FF++ + TP P + L + +A +++ + P
Sbjct: 97 LVATQNNVLLSLRFFQWLCTNHDCTPDPISSNMLFEALLDAKAV-RAAKMVRDIAGFIPD 155
Query: 136 LLTLKSMSIMLSRIS----KFQSYEETLEAFDRME----REIFVGIRKFGSEEFNVLLQA 187
+L+ L + + Y + EA R+ I G K G E LL
Sbjct: 156 SASLEQYVKCLCGVGFIEEAIEVYFQLKEAGIRISIVACNSILSGCLKAGKTE---LLFE 212
Query: 188 FCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
F +EM +K + N +T+ L+ F +SG V ++ + G P
Sbjct: 213 F--YQEM-------IKAGTASDANTETVGCLIQAFCDSGQVARGYELLNQFLKTGLDPGN 263
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TYN I G+C+ + + M LP++ T +I+G +A ++F++
Sbjct: 264 PTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFND 323
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
+ R PD Y MI L A +L EM +K + + TY+TM G +KS
Sbjct: 324 LKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGD 383
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
E C+LY+ M + T T ++ C + D ++ + + G +
Sbjct: 384 FERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNS 443
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
L+ G C G+ +E +++ + Q S + Y +L ++++ + E R++ ++
Sbjct: 444 LIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELL---IIKSCKDGDFEAAKRLLGDMS 500
Query: 488 A 488
+
Sbjct: 501 S 501
>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
mitochondrial-like [Vitis vinifera]
Length = 718
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 185/452 (40%), Gaps = 48/452 (10%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH------------ 133
AL F++ P F + F L ILA+ A+ +M V +
Sbjct: 98 ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGC 157
Query: 134 -PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER------------------------- 167
S +++K + +++ SK E+ L FD+M +
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 168 --EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
E++ + +FG + +N LL ++C ++++ + ++ R APN+ T N+L+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G + G+ + EM+ G + S TYN I GY KG +A+ L EEM P
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T + I+G + + A Q +M NL PD+ +YN +I R +L A L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
DE+ + VTY+T+ GL + LE +L MI P T +L+ C
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ + + ++ G +A + G G AF ++ML + Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 461 RMLQRYLVQ-ANANEKLEDLDRMIKNLQAVLP 491
++ L + N E E L +M+ + V+P
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSD--GVIP 547
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 1/288 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C Q E++ A+ + V++++ AP+ T IL+ G + G ++ + F+ EM+
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G Y RI G K G A L EEM P L ++ G + N+
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L +M + PD Y ++I + + L E+ EM K + VTY +
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G LE + M E +P T L+ C R+D N + ++++G
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
P+ ++ +L+ C+ G W+EA KQML R Q ++ L + L
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C M +A +L+ P+ + N L+ G+ G++ + + E+
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P++VTYN +DG C++G A +L EM P + T T L++G+ + ++
Sbjct: 402 SIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++ FDEM L+ D AY I ++ D + A L +EM K D + Y+ +
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K LE +L +M+ +P T ++ N R+ G ++ ++ +G
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P +L+ G +GR E AF
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAF 604
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 97/195 (49%), Gaps = 1/195 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV++ C ++EA + K++S P+ T ++ E+G + ++EM+
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSVVTY + I G+ KG A F EM+ LP++ T +LI+G VR +
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA F EM ++ + P+ +Y +I+ + A+ L +M ++ + D+ T+ +
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Query: 360 FGLMKSSGLEGVCKL 374
L K L+ V +L
Sbjct: 697 KQLGKDCKLQAVRQL 711
>gi|410109891|gb|AFV61025.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
cujabensis]
Length = 409
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 84/319 (26%), Positives = 144/319 (45%), Gaps = 17/319 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 87 AIECYRLTXEHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 143
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 144 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 195
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + EM+++G P+ VT+ IDG+CK
Sbjct: 196 KSAMLASGXXPDVYTYSVLINGLCKESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCK 255
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 256 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFT 315
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A M ++ I D+V Y + GL + K+ M+
Sbjct: 316 YTTLIDGCCKEGDLDTAFXHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 375
Query: 380 EGKFVPKTRTVVMLMKFFC 398
P T M++ FC
Sbjct: 376 SVGLXPDAGTYTMIINEFC 394
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 92/405 (22%), Positives = 171/405 (42%), Gaps = 39/405 (9%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH ++ M H TH L KS+ +++SR K + +
Sbjct: 5 SPANSTFRHTLH----------SYCTMIHFLCTHQMLSEAKSLIEVVVSRKGKGSASAVF 54
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV-----KLLSRFAP 210
LE +I+V F+ L+ A+ +++A + KL F
Sbjct: 55 AAVLETKGNQRSDIYV---------FSGLITAYLESGFLRDAIECYRLTXEHKLWVPFDT 105
Query: 211 NNKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
K + L L FK + FY E++ G+ S+ +NI + +CK G A
Sbjct: 106 CRKVLEHLMKLKYFK------LVWGFYEEILECGYPASLYFFNILMHRFCKDGDIRVAQS 159
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+F+ + + PS+ + TL++G + ++ + +L M PD+ Y+ +I+ L
Sbjct: 160 VFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGXXPDVYTYSVLINGLC 219
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ ++ A EL DEM K + + VT+ T+ G K+ ++ ++Y +M+ +P
Sbjct: 220 KESKMDGANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLI 279
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C + +L + +G P L+ G C G + AF K+M
Sbjct: 280 TYNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRM 339
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ ++ + +Y L L Q + D ++M++ + +V P
Sbjct: 340 IQENIRLDDVAYTALISGLCQEG---RSVDAEKMLREMLSVGLXP 381
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/129 (24%), Positives = 56/129 (43%), Gaps = 1/129 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + ++K+A + ++ + P+ T L+ G + GD+ M+
Sbjct: 281 YNTLIYGLCKKGDLKQAHDLIDEMSXKGLKPDKFTYTTLIDGCCKEGDLDTAFXHRKRMI 340
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R V Y I G C++G DA ++ EM V P T T +I+ ++
Sbjct: 341 QENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLXPDAGTYTMIINEFCKKGDVW 400
Query: 300 QARQLFDEM 308
+ +L EM
Sbjct: 401 KGSKLLKEM 409
>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 743
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 107/407 (26%), Positives = 173/407 (42%), Gaps = 62/407 (15%)
Query: 93 TLQHP--HFTPTPDAFEKTLHILARMRYFD--------QAWELMSHVQRTHPSLLTLKSM 142
+L HP H +P P K L +A Y Q ++ M + + P+LLT ++
Sbjct: 117 SLLHPNLHLSPPPS---KALFDIALSAYLHAGKPHVALQVFQKMIRL-KLKPNLLTCNTL 172
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I L R S E FD M + +G+ + FNVL+ +C + ++++A +
Sbjct: 173 LIGLVRYPSSFSIASAREVFDDM---VKIGVS-LDVKTFNVLVNGYCLEGKLEDALGMLE 228
Query: 203 KLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++S F P+N T N +L + G ++ ++ +M G P+ VTYN + GYCK
Sbjct: 229 RMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKL 288
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G +A ++ E M++ LP L T LI+G +I + +L D M L+PD+ Y
Sbjct: 289 GSLKEAFQIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTY 348
Query: 321 NAMISSLIRCRDLNAAME---LMDEM---------------------EEKR--------- 347
N +I C +L ++E LM++M EEKR
Sbjct: 349 NTLIDG---CFELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKE 405
Query: 348 ------IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
D VTYHT+ +K L G ++ M + T T+ ++ C
Sbjct: 406 LVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKER 465
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+VD NL RG+ L+ G + E+AFE +M
Sbjct: 466 KVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEM 512
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 96/427 (22%), Positives = 171/427 (40%), Gaps = 42/427 (9%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD + T+L+ + + LS +V L NGL P
Sbjct: 238 PDNVTYNTILKAMSKKGRLS-----DVKDLLLDMKRNGL---------------VPNRVT 277
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ ++ ++ +A++++ +++T+ P L T +I+++ + S E LE D
Sbjct: 278 YNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCT---YNILINGVCNAGSIREGLELMD 334
Query: 164 RMER------EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI 217
M+ + G E + L+A +K M++ + VK PN T NI
Sbjct: 335 VMKSLKLQPDVVTYNTLIDGCFELGLSLEA---KKLMEQMENDGVK------PNQVTHNI 385
Query: 218 LLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L + + E+V + GF P +VTY+ I Y K G A+ + EM +
Sbjct: 386 SLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMREMGQK 445
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+ T+ T++ R + +A L D KR D Y +I R + A
Sbjct: 446 GIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEKVEKA 505
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
E+ DEM+ +I T++++ GL E + +D + E +P T ++
Sbjct: 506 FEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNSIILG 565
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C RV+ + I F P + ++L+ GLC G E+A L+ R+V
Sbjct: 566 YCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFF-NTLITEREVD 624
Query: 457 EASYRML 463
+Y +
Sbjct: 625 TVTYNTM 631
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 79/313 (25%), Positives = 123/313 (39%), Gaps = 49/313 (15%)
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG- 221
M RE+ K + N +L A C ++++ EA ++ R + + T L++G
Sbjct: 437 EMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGY 496
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F+E A EM + EM P+V T+N I G C G AM F+E+ LP
Sbjct: 497 FREEKVEKAFEM-WDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD------------------------- 316
T ++I G + +A + ++E K + KPD
Sbjct: 556 DCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615
Query: 317 ---------IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
YN MIS+ + + L A +L+ EMEEKR+ D TY+++ LM+
Sbjct: 616 TLITEREVDTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGK 675
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L +L + GKF R N ++ N A
Sbjct: 676 LSEADELLKK-FSGKFGSMKR-----------NLHLETEKNPATSESKEELKTEAIAYSD 723
Query: 428 LVTGLCSRGRWEE 440
++ LCSRGR +E
Sbjct: 724 VINELCSRGRLKE 736
>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 823
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 97/391 (24%), Positives = 175/391 (44%), Gaps = 28/391 (7%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPD---------------AFEKTLHILARMRYFDQAWEL 125
SNG F K +H F D A LH A + +A E+
Sbjct: 97 SNGFACSSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEI 156
Query: 126 MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVL 184
+V + S+ + + + +LS + K + E+ + +D M ER V + ++
Sbjct: 157 YDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVD-----NYSTCIM 211
Query: 185 LQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
++ C++ +++E R + + PN N ++ G+ + GD+ ++ + E+ L+GF
Sbjct: 212 VKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGF 271
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA---CLPSLQTITTLIHGAGLVRNIHQ 300
P++ T+ I+G+CKKG F + RL EE++ C+ L I + G + +
Sbjct: 272 MPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAE 331
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
+ + + + KPDI YN +I+ L + A L+DE +K + N++Y +
Sbjct: 332 SIRW---IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQ 388
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
KS + KL ++ E P T +L+ V+ +D +N+ LIDRG P
Sbjct: 389 AYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSP 448
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++L++GLC GR+ A +ML R
Sbjct: 449 DAAIYNMLMSGLCKTGRFLPAKLLFSEMLDR 479
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 118/261 (45%), Gaps = 5/261 (1%)
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ + +I+++R+ K E D ++ + + + L+QA+C KE A
Sbjct: 345 IATYNILINRLCKEGKKEVAAGLLDEASKKGLI----LTNLSYAPLIQAYCKSKEYDIAS 400
Query: 199 SVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ ++L R P+ T IL+ G SG + +++ RG P YN+ + G
Sbjct: 401 KLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGL 460
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G F A LF EM + LP TLI G + +AR++F ++ +K D+
Sbjct: 461 CKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDV 520
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
+NAMI R L+ A+ M+ M E+ + D TY T+ G +K + K++
Sbjct: 521 VHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRD 580
Query: 378 MIEGKFVPKTRTVVMLMKFFC 398
M + K P T L+ FC
Sbjct: 581 MEKNKCKPNVVTYTSLINGFC 601
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/370 (21%), Positives = 143/370 (38%), Gaps = 52/370 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ C A+ +F ++L R P+ L+ GF SGD + V
Sbjct: 453 YNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSV 512
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + VV +N I G+C+ G +A+ M +P T +T+I G +++
Sbjct: 513 EKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMA 572
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++F +M K KP++ Y ++I+ D + A E EM+ + + + VTY T+
Sbjct: 573 TAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLI 632
Query: 360 FGLMK-SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF--------------------- 397
K SS LE ++ M+ K VP T L++ F
Sbjct: 633 RSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSF 692
Query: 398 ----------------------------CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
CV+ V L ++ +GF P + ++
Sbjct: 693 LFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAIL 752
Query: 430 TGLCSRGRWEEAFECSKQMLVRRR-QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
G C G ++ + L + +V+ R+L+++L +A E L M++
Sbjct: 753 HGFCVVGNSKQWRNMDFRNLDEKGLEVAVRYSRVLEQHLPKAVICEASTILHAMVEKADT 812
Query: 489 VLPPPTRQQV 498
P R V
Sbjct: 813 KEPEICRISV 822
>gi|302141714|emb|CBI18917.3| unnamed protein product [Vitis vinifera]
Length = 496
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 161/341 (47%), Gaps = 14/341 (4%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
E + AF+RME +G + F+V++ + ++ EA+S F L RF P+
Sbjct: 164 EAVHAFNRME--------DYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDRFEPDV 215
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
L+ G+ +G+++ E + EM + G +P+V TY+I ID C+ G A +F E
Sbjct: 216 VVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHDVFSE 275
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M V C P+ T L+ + Q++++M + PD YN +I S R +
Sbjct: 276 MIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHCRDDN 335
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
L A+++++ + +K + +++ +F + K + +++ +M + K P T T +
Sbjct: 336 LEEAVKILNSV-KKGCNLNASSFNPIFGCISKLGDVNSAHRMFAKMKDLKCRPNTVTYNI 394
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
LM+ F D+ L L + + P+ + +L++ C G W A+ K+M+ +
Sbjct: 395 LMRMFADKKSTDMVLKLRKEMDENEIEPNANTYRVLISTFCGIGHWNNAYSFFKEMIEEK 454
Query: 453 -RQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+ S Y M+ + L +A +K E+L + N V P
Sbjct: 455 CLRPSLPVYEMVLQQLRKAGQLKKHEELVEKMVNRGFVTRP 495
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 75/190 (39%), Gaps = 1/190 (0%)
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
ID K G +A+ F ME C P + +I R +A+ FD + R
Sbjct: 153 IDLAGKAGLAAEAVHAFNRMEDYGCKPDKIAFSVVISSLSKKRRAIEAQSFFDSLKDR-F 211
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ Y +++ R +++ A + EM+ I + TY + L +S +
Sbjct: 212 EPDVVVYTSLVHGWCRAGNISEAERVFGEMKMAGIQPNVYTYSIVIDALCRSGQITRAHD 271
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
++ MI+ P T LM+ R + L ++ + G P + L+ C
Sbjct: 272 VFSEMIDVGCDPNAITFNNLMRVHVKAGRTEKVLQVYNQMKRLGCPPDAITYNFLIESHC 331
Query: 434 SRGRWEEAFE 443
EEA +
Sbjct: 332 RDDNLEEAVK 341
>gi|255660828|gb|ACU25583.1| pentatricopeptide repeat-containing protein [Lantana canescens]
Length = 418
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 91/320 (28%), Positives = 149/320 (46%), Gaps = 19/320 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 142 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ I D V Y + GL + K+ M
Sbjct: 313 TYTTLIDGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALXSGLCQEGRSVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFC 398
+ P RT M++ FC
Sbjct: 373 LSVGLKPDARTYTMIINEFC 392
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 123 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 302
Query: 449 LVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
V+ + + +Y ++ + + + E RMI+
Sbjct: 303 SVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMIQ 339
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 57/140 (40%), Gaps = 36/140 (25%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV----------- 228
+N L+ C + ++K+A + ++ + P+ T L+ G + GD+
Sbjct: 279 YNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKITYTTLIDGCCKEGDLDSAFEHRKRMI 338
Query: 229 -----------TAM-------------EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
TA+ E EM+ G +P TY + I+ +CKKG
Sbjct: 339 QENIRLDEVAYTALXSGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMIINEFCKKGDVW 398
Query: 265 DAMRLFEEMERVACLPSLQT 284
+L +EM+R +PS+ T
Sbjct: 399 KGSKLLKEMQRDGHVPSVVT 418
>gi|242073384|ref|XP_002446628.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
gi|241937811|gb|EES10956.1| hypothetical protein SORBIDRAFT_06g019140 [Sorghum bicolor]
Length = 614
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 130/300 (43%), Gaps = 36/300 (12%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+++FN+L++ ++ AR++F ++L R P T N L+ G ++ D+ +
Sbjct: 244 AKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFNTLMSGMCKASDLNSANALRG 303
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
M G P V TY + G CK G DA+ +FEEM P+ TTLI
Sbjct: 304 LMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEG 363
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ +L EM R +K D+ AYNA+ + L R RDL AA ++++EM + D VTY
Sbjct: 364 NVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYT 423
Query: 357 TMFFGLMKSSGL------------EGVC-----------------------KLYDRMIEG 381
T+ G K L EGV ++ M+E
Sbjct: 424 TLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEA 483
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T M++ FC N V G L + ++G P ++++ G C G+ + A
Sbjct: 484 GLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNA 543
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 110/264 (41%), Gaps = 1/264 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +Q C +++A +F ++ R PN L+ + G+V A + EM
Sbjct: 317 YGAFMQGLCKAGRIQDAVEMFEEMRERGVNPNTVVFTTLIDAHCKEGNVAAGLELHREMA 376
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG + +V YN +G C+ A + EEM P T TTLI G +
Sbjct: 377 TRGIKTDLVAYNALANGLCRVRDLKAANDIVEEMRNNGLKPDKVTYTTLIDGFCKEGELD 436
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ EM + D Y +IS L + + ++ EM E + DN TY +
Sbjct: 437 MAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMMEAGLEPDNTTYTMVI 496
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K+S ++ KL M P T ++M FC+ ++ L +++ G C
Sbjct: 497 DAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMKNADMLLNAMLNIGVC 556
Query: 420 PHGHALDLLVTGLCSRGRWEEAFE 443
P ++L+ G C G+ +A E
Sbjct: 557 PDDITYNILLDGHCKHGKVRDAEE 580
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/189 (20%), Positives = 78/189 (41%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ +A + ++ + P+ +N ++ +IR L +A + DEM + + VT++
Sbjct: 224 SVPEAYAFYLQLLDAGVPPEAKQFNMLMRDMIRSGKLASARNMFDEMLRRGVPPTVVTFN 283
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G+ K+S L L M + P T M+ C R+ + ++ + +R
Sbjct: 284 TLMSGMCKASDLNSANALRGLMAKAGVAPDVYTYGAFMQGLCKAGRIQDAVEMFEEMRER 343
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P+ L+ C G E ++M R + +Y L L + +
Sbjct: 344 GVNPNTVVFTTLIDAHCKEGNVAAGLELHREMATRGIKTDLVAYNALANGLCRVRDLKAA 403
Query: 477 EDLDRMIKN 485
D+ ++N
Sbjct: 404 NDIVEEMRN 412
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 1/160 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC + E+ A + ++ A + T L+ G +SG E EM+
Sbjct: 422 YTTLIDGFCKEGELDMAMEMKQEMSDEGVALDEVTYTTLISGLSKSGRSVDSERILCEMM 481
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P TY + ID +CK +L +EM+ P + T +++G ++ +
Sbjct: 482 EAGLEPDNTTYTMVIDAFCKNSDVKTGFKLLKEMQNKGRKPGVVTYNVVMNGFCILGQMK 541
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
A L + M + PD YN ++ + + A EL
Sbjct: 542 NADMLLNAMLNIGVCPDDITYNILLDGHCKHGKVRDAEEL 581
>gi|255557793|ref|XP_002519926.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540972|gb|EEF42530.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 481
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 181/389 (46%), Gaps = 11/389 (2%)
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT 138
++SN A+EFF++ + T TP ++ + +L + + F+ W+ + +++ + +L+
Sbjct: 77 SYSNPASAVEFFRWAGRSG--THTPYSWNLMVDLLGKNQLFEAMWDAIRSMKQEN--VLS 132
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK-EA 197
+ + + + K S+ E + +FD M++ GI++ N LL A C + +A
Sbjct: 133 MATFASVFGSYCKAGSFSEAIMSFDIMDK---YGIQQ-DVIAVNSLLSAICNEDNQTIKA 188
Query: 198 RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRP-SVVTYNIRID 255
F ++ + P+ T ILL G+++ G+ + + EMV+ G+ P ++ YN ++
Sbjct: 189 VEFFDRIKLKIPPDGDTYAILLEGWEKEGNAAKAKNIFGEMVIHVGWSPENMPAYNAFLN 248
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
++ DA M+ CLP L+ + + ++ A ++D M L P
Sbjct: 249 LLVRESQTDDAFDFLRLMKEKGCLPGLKFYSDALDMLLKRNDVLHAVPMWDIMVDTGLMP 308
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ YN+MI L D++ A L D+M D +TY +F L+K+ + +
Sbjct: 309 NLLMYNSMIGLLCNNNDIDNAFRLFDDMVFHGAFPDFLTYKMIFRCLVKNKKVSQAASFF 368
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
MI+ + P + F ++ + +W Y++D P + + L+ GL +
Sbjct: 369 HEMIKNENPPTHLDCAAAITMFMGGDDPEMAIEIWNYMVDDQELPLDESANALLVGLGNL 428
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
GR E ++ ML RR + E++ L+
Sbjct: 429 GRLSEVSRFAEDMLDRRINIHESTMAKLK 457
>gi|226492862|ref|NP_001141929.1| uncharacterized protein LOC100274078 [Zea mays]
gi|194706478|gb|ACF87323.1| unknown [Zea mays]
gi|414585156|tpg|DAA35727.1| TPA: hypothetical protein ZEAMMB73_571639 [Zea mays]
Length = 442
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 178/393 (45%), Gaps = 13/393 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYFD 120
L S+L + + + + ++N + AL+FF ++ + PT + + IL + F
Sbjct: 29 LPSSLDASAVLKTLSLYANDWRRALDFFHWSASPAGANLPPTAATLARAVDILGKHFEFP 88
Query: 121 QAWELM-SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
A L+ SH P+ L ++ +L+R++ ++ L AF+ I +
Sbjct: 89 LATSLLLSHHDPGDPTFLR-PALRALLNRLAAANLIDDALHAFESTAASIGL----CDEV 143
Query: 180 EFNVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
F++L+ A C + + EA + F K F P KT N+LL G+ ++ + + +M
Sbjct: 144 SFHILVDALCDHRRVDEADHLCFGKDPPPFPPGTKTHNLLLRGWAKAHAWARLRQLWFDM 203
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG + +Y+I +D K G A ++F+EM++ T IH G+ + +
Sbjct: 204 DRRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQRGIRIDTVAYNTAIHAVGMAQGV 263
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L+ +M KP+I YNA+I + + +M + D +TYH
Sbjct: 264 DSAVRLYRQMVDAGCKPNIATYNAIIKLFCKEGRFKEGYAFVQQMRKTGCKPDVLTYHCF 323
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
F L + + V L+++M+E P+ T VML+K F + +W + ++G
Sbjct: 324 FQYLSRP---QEVLGLFEKMLERGCQPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEEQGL 380
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P A + L+ L +G + A + ++ML +
Sbjct: 381 SPDAFAYNALIDALLQKGMVDLARKYDEKMLAK 413
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/250 (20%), Positives = 105/250 (42%), Gaps = 8/250 (3%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K+ +++L +K ++ + + M+R G+ K +++ + A + +A
Sbjct: 178 KTHNLLLRGWAKAHAWARLRQLWFDMDRR---GVAK-DLHSYSIYMDALAKSGKPWKAFK 233
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
VF ++ R + N + + V + Y +MV G +P++ TYN I +C
Sbjct: 234 VFKEMKQRGIRIDTVAYNTAIHAVGMAQGVDSAVRLYRQMVDAGCKPNIATYNAIIKLFC 293
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G F + ++M + C P + T + + LF++M +R +P +
Sbjct: 294 KEGRFKEGYAFVQQMRKTGCKPDVLTYHCFFQ---YLSRPQEVLGLFEKMLERGCQPRMD 350
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I R L + MEE+ + D Y+ + L++ ++ K ++M
Sbjct: 351 TYVMLIKRFGRWGFLRPVFIVWKAMEEQGLSPDAFAYNALIDALLQKGMVDLARKYDEKM 410
Query: 379 IEGKFVPKTR 388
+ PK R
Sbjct: 411 LAKGLSPKPR 420
>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
Length = 841
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 81/333 (24%), Positives = 148/333 (44%), Gaps = 40/333 (12%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + K E +++M R+ G+R +N ++ C Q +M A VFV++
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRK---GVRP-SVVSYNNMILGHCQQGDMDSANGVFVEM 494
Query: 205 LSR------------------------------------FAPNNKTMNILLLGFKESGDV 228
L + AP++ T NI++ G ++G
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+ + ++V GF P+ +TYN IDG+ K+G A+ ++ EM ++ P++ T T L
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G N+ A ++ DEM + ++ D+ Y A+I R D+ A +L+ E++E +
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ V Y +M G K +E L+ RMI + L+ ++
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ ++ +G P +L+ GLC++G+ E A
Sbjct: 735 LYAEMLAKGIMPDLITYSVLIHGLCNKGQLENA 767
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 133/342 (38%), Gaps = 47/342 (13%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQ 191
P+L+T S+++ K E +DRM E +F N+++ C
Sbjct: 501 PNLITY---SVLMDGYFKKGDTEYAFGLYDRMRGE------NIAPSDFTCNIIINGLCKA 551
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
E++ KL+ F P T N ++ GF + G V + Y EM G P+V TY
Sbjct: 552 GRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTY 611
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
I+G+CK A+++ +EM+ + LI G ++ A QL E+ +
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
L P+ Y++MIS + +++ AA+ L M + I D Y T+ GL+K L
Sbjct: 672 VGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLF 731
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD-------------------------- 404
+LY M+ +P T +L+ C +++
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791
Query: 405 ---------LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
L ++D+G P D+LV G G
Sbjct: 792 GHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGN 833
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 154/356 (43%), Gaps = 17/356 (4%)
Query: 119 FDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
D A EL + P+ +T ++++ K + ++ E +++M+ +
Sbjct: 345 LDSALELFDKMNENGICPNNVTY---AVIIEWCCKNGNMDKAYEIYNQMKN------KDI 395
Query: 177 GSEEFNV--LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
FNV L++ + + +EA +F + ++ N T N LL + G ++
Sbjct: 396 SPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGKMSEACSI 455
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +MV +G RPSVV+YN I G+C++G A +F EM P+L T + L+ G
Sbjct: 456 WEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFK 515
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ A L+D M N+ P N +I+ L + + + + + ++ ++ +T
Sbjct: 516 KGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMT 575
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + G +K + +Y M + P T L+ FC + +DL L + +
Sbjct: 576 YNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK 635
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
++G L+ G C +G A Q+L ++V + +++ ++
Sbjct: 636 NKGIELDVTVYCALIDGFCRKGDMVNA----SQLLSELQEVGLSPNKVVYSSMISG 687
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 114/257 (44%), Gaps = 5/257 (1%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ G +VV + GYCK+G A+ LF++M P+ T +I
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TY 355
N+ +A +++++M +++ P + N++I ++ R A +L D E G NV TY
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFD--EAVACGIANVFTY 436
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+++ L K + C ++++M+ P + ++ C +D ++ +++
Sbjct: 437 NSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLE 496
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G P+ +L+ G +G E AF +M S+ + ++ L +A
Sbjct: 497 KGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTS- 555
Query: 476 LEDLDRMIKNLQAVLPP 492
E DR+ K +Q P
Sbjct: 556 -ESQDRLKKLVQEGFIP 571
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 104/520 (20%), Positives = 202/520 (38%), Gaps = 71/520 (13%)
Query: 25 STTTQSSEIERITRIINDHPFPDQPLHPTLLQHLP-QTTPLS--STLVENVLGRLFAAHS 81
S T SS+ E I++ P P HP + P ++ P S S L + H
Sbjct: 19 SPKTLSSQPELPNIPISETPLSQNP-HPN--TNFPGKSAPTSQDSFLTQTQYIDTLLNHQ 75
Query: 82 NGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARM------------RYFDQAWELMSH 128
N + AL +F + Q + DA LHIL + R+ W +
Sbjct: 76 NDPQSALSYFTWASQKRGLIKSVDALCVLLHILTKSTETCGKARNLLNRFASDDWGPVPS 135
Query: 129 V--QRTHPSLLTL------KSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSE 179
V R S L + + +L+ K + + ++ F+ + E++I +
Sbjct: 136 VVVARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVM--- 192
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEM 238
N+ L ++EAR V+ K+ S+ + T+++++ G + E ++ E
Sbjct: 193 --NIFLSELVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREA 250
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM------------------------- 273
+G Y+I I+ CKK A+ L EM
Sbjct: 251 KNKGVELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKM 310
Query: 274 --------ERVACLPSLQTI--TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
E ++C + + TTL+ G ++ A +LFD+M + + P+ Y +
Sbjct: 311 LEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVI 370
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + +++ A E+ ++M+ K I +++ G +K+ E KL+D +
Sbjct: 371 IEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACG- 429
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ T L+ + C ++ ++W ++ +G P + + ++ G C +G + A
Sbjct: 430 IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANG 489
Query: 444 CSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDRM 482
+ML + + + +Y +L Y + + DRM
Sbjct: 490 VFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRM 529
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC + +M A + +L +PN + ++ GF++ ++ A + M+
Sbjct: 646 YCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + Y I G K+G A L+ EM +P L T + LIHG +
Sbjct: 706 NEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLE 765
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+++ ++M ++ + P + YN +I+ + +L A L +EM +K + D+ TY +
Sbjct: 766 NAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILV 825
Query: 360 FGLMKSSGL 368
G +K L
Sbjct: 826 NGKVKDGNL 834
>gi|410109919|gb|AFV61039.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
duartei]
Length = 412
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 161/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 72 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 128
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
++ R K + R+ + +F I K+G +N L+ + ++ E +
Sbjct: 129 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRXGDLDEGFXL 180
Query: 201 FVKLL-SRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 181 KSXMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 239
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 240 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSVKGLKPDKI 299
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I+ + DL++A E M ++ I D V Y + G + K+ M
Sbjct: 300 TYTTLINGCCKEGDLDSAFEHRKRMIQENIRLDEVAYTALISGXCQEGRSVDAEKMLREM 359
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 360 LSVGLKPDARTYTMIINEFCKXGDVWXGSKLLKEMQRDGHVPSVVTYNVLMNG 412
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 99/217 (45%), Gaps = 1/217 (0%)
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+EE+ SL L+H +I A+ +FD + K L+P + +YN +++ I
Sbjct: 110 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 169
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ L M + D TY + GL K S ++ +L+D M+ VP
Sbjct: 170 RXGDLDEGFXLKSXMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 229
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N RVDL + ++ ++ + P + L+ GLC +G ++A +M
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 289
Query: 449 LVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
V+ + + +Y ++ + + + E RMI+
Sbjct: 290 SVKGLKPDKITYTTLINGCCKEGDLDSAFEHRKRMIQ 326
>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At3g16710, mitochondrial; Flags: Precursor
gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 507
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 103/410 (25%), Positives = 186/410 (45%), Gaps = 23/410 (5%)
Query: 82 NGLKALEFFK----FT-LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PS 135
NGL L+F FT + H P+ F + L ++A+M +D L +Q P
Sbjct: 57 NGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPP 116
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSE----EFNVLLQAFCT 190
LL ++ + +S F+G + K G E F LL +C
Sbjct: 117 LLCTCNIVMHCVCLSS-----------QPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH 165
Query: 191 QKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+++A ++F ++L F PN T L+ ++ + +++M G RP+VVT
Sbjct: 166 WNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVT 225
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN + G C+ G +GDA L +M + P++ T T LI V + +A++L++ M
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ ++ PD+ Y ++I+ L L+ A ++ ME + V Y T+ G KS +E
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
K++ M + V T T +L++ +C+ R D+ ++ + R P ++L+
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
GLC G+ E+A + M R ++ +Y ++ + + + E DL
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDL 455
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 119/269 (44%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C +A + ++ R PN T L+ F + G + + Y+ M+
Sbjct: 226 YNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMI 285
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V TY I+G C G +A ++F MER C P+ TTLIHG + +
Sbjct: 286 QMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVE 345
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++F EM ++ + + Y +I + A E+ ++M +R D TY+ +
Sbjct: 346 DGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLL 405
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + +E +++ M + + T ++++ C +V+ +L+ L +G
Sbjct: 406 DGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMK 465
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ +++G C RG EA K+M
Sbjct: 466 PNVITYTTMISGFCRRGLIHEADSLFKKM 494
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 141/326 (43%), Gaps = 10/326 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P + + L + R+ + A EL + + + P+++T ++ L I ++
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTM 215
L D M+R I + F + L+ AF ++ EA+ ++ V + P+ T
Sbjct: 244 WLLR--DMMKRRIEPNVITFTA-----LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTY 296
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G G + ++ M G P+ V Y I G+CK D M++F EM +
Sbjct: 297 GSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQ 356
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ + T T LI G LV A+++F++M R PDI YN ++ L +
Sbjct: 357 KGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEK 416
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+ + + M ++ + + VTY + G+ K +E L+ + P T ++
Sbjct: 417 ALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMIS 476
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPH 421
FC + +L+ + + GF P+
Sbjct: 477 GFCRRGLIHEADSLFKKMKEDGFLPN 502
>gi|356561955|ref|XP_003549241.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Glycine max]
Length = 622
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 159/372 (42%), Gaps = 50/372 (13%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-------VQRTHPSLLTLKS 141
F + P F P P F+ ++ LA+ R FD AW+L+ H + L+++ +
Sbjct: 144 LFLWAQTRPAFRPGPKLFDAVVNALAKAREFDAAWKLVLHHAEKDGEEEGEKERLVSVGT 203
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARS 199
+IM+ R ++ + + ++ I GSE +L+ + C + ++EA
Sbjct: 204 FAIMIRRYARAGMSKLAIRTYEFATNN--KSIVDSGSEMSLLEILMDSLCKEGSVREASE 261
Query: 200 VFV---KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
F+ +L + P+ + NI+L G+ + E + EM RP+VVTY ++G
Sbjct: 262 YFLWKKELDLSWVPSIRVYNIMLNGWFRLRKLKQGERLWAEMK-ENMRPTVVTYGTLVEG 320
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+ +R + +A ++ +M K + P+
Sbjct: 321 YCR-----------------------------------MRRVEKALEMVGDMTKEGIAPN 345
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
YN +I +L A+ +++ IG + TY+++ G K+ L G K+
Sbjct: 346 AIVYNPIIDALAEAGRFKEALGMLERFHVLEIGPTDSTYNSLVKGFCKAGDLVGASKILK 405
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
MI F+P T ++F +++ G+NL+ LI G+ P LLV LC
Sbjct: 406 MMISRGFLPSATTYNYFFRYFSRCRKIEEGMNLYTKLIQSGYTPDRLTYHLLVKMLCEEE 465
Query: 437 RWEEAFECSKQM 448
+ + A + SK+M
Sbjct: 466 KLDLAVQVSKEM 477
>gi|302143409|emb|CBI21970.3| unnamed protein product [Vitis vinifera]
Length = 375
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/315 (26%), Positives = 146/315 (46%), Gaps = 11/315 (3%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R PS++ S +L+ I++ + Y L + +M+ GI + N+L+ +FC
Sbjct: 5 RPPPSIV---DFSKLLTSITRMKHYSTVLSLYKQMDS---FGIPH-NTYTLNILINSFCH 57
Query: 191 QKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+ A SV +L + P+ T L+ G G + + +M GF+P V+T
Sbjct: 58 LNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLT 117
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I+G CK +A+ LF +M P+ T ++LIHG ++ + +A +LF M
Sbjct: 118 YGTLINGLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMI 177
Query: 310 KRNLKPDIGAYNAMISSLIR---CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
R + PD +N ++ +L + + ++ AM L +EM ++ + D VTY+T+ GL
Sbjct: 178 HRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVG 237
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
L L+ M+ +P T +L + C N R+ + L + P H
Sbjct: 238 RLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYS 297
Query: 427 LLVTGLCSRGRWEEA 441
+++ G+C G E A
Sbjct: 298 IVMDGMCRAGELEAA 312
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 119/263 (45%), Gaps = 6/263 (2%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
Y +M G + T NI I+ +C G A + ++ ++ PS T TTLI G
Sbjct: 32 LYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLC 91
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ I +A QLFD+M +PD+ Y +I+ L + R L A+ L +M K I +N
Sbjct: 92 VEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKDRQLTEALSLFSDMLAKGISPNNF 151
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV---DLGLNLW 410
TY ++ GL + +L+ MI K +P T L+ C + D + L+
Sbjct: 152 TYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLF 211
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ +G P + L+ GLC GR +A +M+V + +YR+L YL +
Sbjct: 212 EEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCK- 270
Query: 471 NANEKLEDLDRMIKNLQAVLPPP 493
N +L + ++K ++ P
Sbjct: 271 --NHRLAEAMVLLKVIEGTNLDP 291
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 89/204 (43%), Gaps = 4/204 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEM---FYH 236
++ L+ C KEA +F ++ R P+ T N L+ + G + M+ +
Sbjct: 153 YSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMIQIMDKAMGLFE 212
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM +G P VTYN I G C G DA+ LF EM +P L T L
Sbjct: 213 EMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNH 272
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A L + NL PDI Y+ ++ + R +L AA +L ++ K + D TY
Sbjct: 273 RLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYT 332
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIE 380
M GL + L KL+ M E
Sbjct: 333 IMINGLCQQGLLAEASKLFGEMDE 356
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Query: 181 FNVLLQAFCTQ---KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
FN L+ A C + + M +A +F ++ + P+ T N L+ G G + +H
Sbjct: 188 FNTLVDALCKEGMIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 247
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV+ G P +VTY I D CK +AM L + +E P + + ++ G
Sbjct: 248 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 307
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ AR LF ++ + L PD+ Y MI+ L + L A +L EM+E I
Sbjct: 308 ELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENDI 359
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/184 (20%), Positives = 77/184 (41%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PS+ + L+ +++ L+ +M + + N +I+S L A +
Sbjct: 8 PSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSV 67
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ ++ + T+ T+ GL + +L+D+M F P T L+ C
Sbjct: 68 LGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCK 127
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+ ++ L+L+ ++ +G P+ L+ GLC G W+EA M+ R+ + +
Sbjct: 128 DRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLT 187
Query: 460 YRML 463
+ L
Sbjct: 188 FNTL 191
>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
Length = 1078
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 107/452 (23%), Positives = 185/452 (40%), Gaps = 48/452 (10%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH------------ 133
AL F++ P F + F L ILA+ A+ +M V +
Sbjct: 98 ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGC 157
Query: 134 -PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER------------------------- 167
S +++K + +++ SK E+ L FD+M +
Sbjct: 158 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 217
Query: 168 --EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
E++ + +FG + +N LL ++C ++++ + ++ R APN+ T N+L+
Sbjct: 218 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 277
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G + G+ + EM+ G + S TYN I GY KG +A+ L EEM P
Sbjct: 278 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASP 337
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T + I+G + + A Q +M NL PD+ +YN +I R +L A L
Sbjct: 338 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 397
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
DE+ + VTY+T+ GL + LE +L MI P T +L+ C
Sbjct: 398 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 457
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ + + ++ G +A + G G AF ++ML + Y
Sbjct: 458 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIY 517
Query: 461 RMLQRYLVQ-ANANEKLEDLDRMIKNLQAVLP 491
++ L + N E E L +M+ + V+P
Sbjct: 518 NVVVDGLCKLGNLEEASELLQKMVSD--GVIP 547
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 128/288 (44%), Gaps = 1/288 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C Q E++ A+ + V++++ AP+ T IL+ G + G ++ + F+ EM+
Sbjct: 412 YNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEML 471
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G Y RI G K G A L EEM P L ++ G + N+
Sbjct: 472 HEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLE 531
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L +M + PD Y ++I + + L E+ EM K + VTY +
Sbjct: 532 EASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLI 591
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G LE + M E +P T L+ C R+D N + ++++G
Sbjct: 592 HGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIF 651
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
P+ ++ +L+ C+ G W+EA KQML R Q ++ L + L
Sbjct: 652 PNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQL 699
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C M +A +L+ P+ + N L+ G+ G++ + + E+
Sbjct: 342 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 401
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P++VTYN +DG C++G A +L EM P + T T L++G+ + ++
Sbjct: 402 SIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 461
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++ FDEM L+ D AY I ++ D + A L +EM K D + Y+ +
Sbjct: 462 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 521
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K LE +L +M+ +P T ++ N R+ G ++ ++ +G
Sbjct: 522 DGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLT 581
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P +L+ G +GR E AF
Sbjct: 582 PSVVTYTVLIHGHAGKGRLERAF 604
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 95/192 (49%), Gaps = 1/192 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NV++ C ++EA + K++S P+ T ++ E+G + ++EM+
Sbjct: 517 YNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEML 576
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSVVTY + I G+ KG A F EM+ LP++ T +LI+G VR +
Sbjct: 577 SKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMD 636
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA F EM ++ + P+ +Y +I+ + A+ L +M ++ + D+ T+ +
Sbjct: 637 QAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALL 696
Query: 360 FGLMKSSGLEGV 371
L K L+ V
Sbjct: 697 KQLGKDCKLQAV 708
>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 526
Score = 118 bits (295), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 102/412 (24%), Positives = 184/412 (44%), Gaps = 63/412 (15%)
Query: 82 NGLKALEFFKFTLQHPHFT-----PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSL 136
NGL +L+F + H P+ F + L+++A+M+ FD L H+Q S
Sbjct: 45 NGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSN 104
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSE----EFNVLLQAFCTQ 191
L + +++++ QS + L + F+G + K G E F L+ FC
Sbjct: 105 -DLYTCNLLMNCFC--QSSQPCLAS-------SFLGKLMKLGFEPDIFTFTSLINGFCLG 154
Query: 192 KEMKEARS---------------VFVKLLSRFAPNNKTMNILLL---------------- 220
++EA S ++ ++ N N L L
Sbjct: 155 NRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMY 214
Query: 221 -----GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
G SG ++ M+ R +P V+T+N ID + K+G DA L+ EM +
Sbjct: 215 TSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQ 274
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
++ P++ T T+LI+G + + +ARQ+F M + PD+ AY ++I+ +C+ +
Sbjct: 275 MSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVED 334
Query: 336 AMELMDEMEEKRIGHDNVTYHTMF--FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
AM++ EM +K + + +TY T+ FGL+ + +++ M+ P RT +L
Sbjct: 335 AMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQ--EVFGHMVSRGVPPNIRTYNVL 392
Query: 394 MKFFCVNFRVDLGLNLWGYLIDR---GFCPHGHALDLLVTGLCSRGRWEEAF 442
+ C N +V+ L ++ + R G P+ ++L+ GLC G+ E+A
Sbjct: 393 LHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKAL 444
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 93/379 (24%), Positives = 163/379 (43%), Gaps = 7/379 (1%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F++A +L SH+ + P L ++ + +L+ I+K + ++ + ++ +G+
Sbjct: 52 FNEALDLFSHMVESRP-LPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ---IMGVSN-DL 106
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
N+L+ FC + A S KL+ F P+ T L+ GF + ++
Sbjct: 107 YTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQ 166
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G +P VV Y ID CK G +A+ LF +ME P + T+L++G
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L M KR +KPD+ +NA+I + ++ L A EL +EM + I + TY +
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL L+ +++ M P L+ FC +V+ + ++ + +G
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKL 476
+ L+ G G+ A E M+ R + +Y +L L N+ L
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKAL 406
Query: 477 EDLDRMIKNLQAVLPPPTR 495
+ M K +PP R
Sbjct: 407 MIFEDMQKREIDGVPPNIR 425
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 159/349 (45%), Gaps = 19/349 (5%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PD + + L + + D A L + ++ P ++ S+ L +++ +
Sbjct: 174 PDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLL 233
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
L M+R+I K FN L+ AF + ++ +A+ ++ +++ APN T
Sbjct: 234 LRGM--MKRKI-----KPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G G + ++ M +G P VV Y I+G+CK DAM++F EM +
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T TTLI G GLV + A+++F M R + P+I YN ++ L +N A+
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKAL 406
Query: 338 ELMDEMEEKRIGHDNV-----TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ ++M+++ I D V TY+ + GL + LE ++ M + T +
Sbjct: 407 MIFEDMQKREI--DGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTI 464
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+++ C +V LNL+ L +G P+ +++GL G EA
Sbjct: 465 IIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEA 513
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 114/263 (43%), Gaps = 10/263 (3%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L F L A E + +Q P + ++ L D+A + M ++
Sbjct: 250 NALIDAFVKEGKLLDAKELYNEMIQMS-IAPNIFTYTSLINGLCMEGRLDEARQ-MFYLM 307
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
T + + + +++ K + E+ ++ F M ++ G + + L+Q F
Sbjct: 308 ETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTG----NTITYTTLIQGFGL 363
Query: 191 QKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR---GFRPS 246
+ A+ VF ++SR PN +T N+LL +G V M + +M R G P+
Sbjct: 364 VGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPN 423
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ TYN+ + G C G A+ +F +M++ + T T +I G + A LF
Sbjct: 424 IRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFC 483
Query: 307 EMPKRNLKPDIGAYNAMISSLIR 329
+P + +KP++ Y MIS L R
Sbjct: 484 SLPSKGVKPNVVTYTTMISGLFR 506
>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
[Arabidopsis thaliana]
Length = 735
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 139/300 (46%), Gaps = 5/300 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + + + + F ME + GI K +N L++ C + + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK---GI-KSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++SR PN T N+LL F + G + Y EM+ RG P+++TYN +DGYC +
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A + + M R C P + T T+LI G +V+ + ++F + KR L + Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + + A EL EM + D +TY + GL + LE ++++ + +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K +++ C +V+ NL+ L +G P+ ++++GLC +G EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 173 IRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGD 227
+ K G E FN L++ + ++ EA + +++ P+ T N ++ G SGD
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ +M R + V TY+ ID C+ GC A+ LF+EME S+ T +
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ G + L +M R + P++ +N ++ ++ L A EL EM +
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + +TY+T+ G + L + D M+ K P T L+K +C+ RVD G+
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ + RG + +LV G C G+ + A E ++M+ +Y +L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 468 VQANANEKLEDLDRMIKNLQ 487
N KLE + ++LQ
Sbjct: 449 CD---NGKLEKALEIFEDLQ 465
Score = 104 bits (260), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L++ +C K + + VF + R N T +IL+ GF +SG + E + EMV
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TY I +DG C G A+ +FE++++ + TT+I G +
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP++ Y MIS L + L+ A L+ +MEE ++ TY+T+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ L KL + M F ++ M++
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 12/264 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++FN++L FC Q E L+ A N T+NI++ F +
Sbjct: 101 TKQFNLVLD-FCKQLE-----------LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
++ G+ P T+N I G +G +A+ L + M C P + T ++++G +
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L +M +RN+K D+ Y+ +I SL R ++AA+ L EME K I VTY++
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ L M+ + VP T +L+ F ++ L+ +I RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ + L+ G C + R EA
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEA 352
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
F ++ L G ++ T NI I+ +C+ K CF A + ++ ++ P T TLI G
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + +A L D M + +PD+ YN++++ + R D + A++L+ +MEE+ + D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY T+ L + ++ L+ M T L++ C + + G L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQA 470
++ R P+ ++L+ G+ +EA E K+M+ R + +Y ++ Y +Q
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 471 NANEKLEDLDRMIKN 485
+E LD M++N
Sbjct: 348 RLSEANNMLDLMVRN 362
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++F I K G + +++L+Q FC ++K A +F +++S P+ T ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 223 KESGDV-TAMEMF----------------------------------YHEMVLRGFRPSV 247
++G + A+E+F + + +G +P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+TY + I G CKKG +A L +ME P+ T TLI ++ + +L +E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 308 MPKRNLKPDIGAYNAMISSLI 328
M D + +I L+
Sbjct: 569 MKSCGFSADASSIKMVIDMLL 589
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF+EM R LPSL + + + ++ + +I N MI
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RC A ++ ++ + D T++T+ GL + L DRM+E
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C + L L+L + +R ++ LC G + A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M + + S +Y L R L +A
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKA 276
>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 539
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 128/264 (48%), Gaps = 2/264 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N ++ FC+ + A + +++ R P+ T NIL+ G + G V+
Sbjct: 247 SYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAV 306
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ RG++P +V+YN ++GYC G G+A ++F++M LP++ + TLI+G VR
Sbjct: 307 MIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRM 366
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A L EM +NL PD YN ++ L + +L++ M D +TY+
Sbjct: 367 VDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNV 426
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ K + L+ +IE P RT +L+ C + R+ ++ L +G
Sbjct: 427 LLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKG 486
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ ++++ GLC G +EA
Sbjct: 487 CQPNIRTYNIMIHGLCKEGFLDEA 510
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 138/299 (46%), Gaps = 5/299 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + K + Y + + ++ + + K F++L+ AF +M A S+ +
Sbjct: 75 LLSTLIKLKRYNAVVSLYTILQSKPTI---KPSLITFSILINAFAQLGQMGFAFSLLGNI 131
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L F + + + L+ G G V HE V RGFR V Y I+G CK G
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+++F +M+++ P+L T+I G + +A L EM + ++ D+ +YN+M
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251
Query: 324 ISSLIRCRDLNAAMELMDEMEEK-RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
I AA++L+DEM + ++ D T++ + GL K + + MI+
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ P + LM +C++ V ++ +++R P+ + L+ G C +EA
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEA 370
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/243 (23%), Positives = 112/243 (46%), Gaps = 2/243 (0%)
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
+PS++T++I I+ + + G G A L + ++ ++ +TTL+ G L + +A
Sbjct: 102 KPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVS 161
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L E R + D Y +I+ L + A+++ +M++ R+ + + Y+T+ GL
Sbjct: 162 LLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLC 221
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-FCPHG 422
K ++ C L M+E + ++ FC R + L ++ RG P
Sbjct: 222 KQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDV 281
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDR 481
+ ++L+ GLC GR EA+ M+ R + SY L Y + + E + D+
Sbjct: 282 YTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDK 341
Query: 482 MIK 484
M++
Sbjct: 342 MVE 344
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ C + EA +V ++ R + P+ + N L+ G+ SG V + + +MV
Sbjct: 284 FNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMV 343
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
R P+V++Y I+GYCK +AM L EM +P T L+ G
Sbjct: 344 ERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSL 403
Query: 292 ---------------AGLV------------RNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A L+ +A LF + + + P+I YN ++
Sbjct: 404 YEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILL 463
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + L A E+ + K + TY+ M GL K L+ L +M+ ++
Sbjct: 464 DGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYL 523
Query: 385 PKTRT 389
P T
Sbjct: 524 PNYIT 528
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 94/207 (45%), Gaps = 7/207 (3%)
Query: 154 SYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
S E + FD+M ER + + + L+ +C + + EA + ++ ++ P+
Sbjct: 331 SVGEAKQVFDKMVERTALPNVISYCT-----LINGYCKVRMVDEAMVLLTEMHNKNLVPD 385
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N LL G +SG M G ++TYN+ +D Y K F A+ LF+
Sbjct: 386 TVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQ 445
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ + P+++T L+ G + A+++F + + +P+I YN MI L +
Sbjct: 446 HIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEG 505
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTM 358
L+ A L+ +M + +T+ T+
Sbjct: 506 FLDEAEALLYKMVNNNYLPNYITFDTI 532
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 93/196 (47%), Gaps = 18/196 (9%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P ++ ++ ++R D+A L++ H + P +T + LS+ + +
Sbjct: 349 PNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGR------S 402
Query: 159 LEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
L +D +E +R G +NVLL + ++ +A ++F ++ +PN +
Sbjct: 403 LYEWDLVE-----AMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIR 457
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T NILL G +SG + + + + +G +P++ TYNI I G CK+G +A L +M
Sbjct: 458 TYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKM 517
Query: 274 ERVACLPSLQTITTLI 289
LP+ T T++
Sbjct: 518 VNNNYLPNYITFDTIV 533
>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 594
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 166/350 (47%), Gaps = 18/350 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQS---- 154
P ++ + L + R ++A +L H++ P+++T S+ + +++
Sbjct: 242 PEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASIL 301
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
++E LE M+ ++ F++L+ A C + + EA SVF K++ P+
Sbjct: 302 FKEMLEW--NMKPDVVT---------FSILVDALCKEGVVLEALSVFGKMIQIAMEPDIV 350
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T + L+ G +S +EM+ R RP VVT++I +D +CKKG +A + M
Sbjct: 351 TYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLM 410
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P++ T +L+ G L + +AR++FD M + PD+ +YN +I + +
Sbjct: 411 IERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERI 470
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L DEM K + +++T+ T+ GL ++ +L+ +M P T L
Sbjct: 471 DEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTL 530
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ FC + +D L L+ L P+ +L+ G+C G+ E+A E
Sbjct: 531 LSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKE 580
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 95/445 (21%), Positives = 181/445 (40%), Gaps = 83/445 (18%)
Query: 78 AAHSNGLKALEFFKFTLQHPHFTPTP--DAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
+ SN AL +F Q H P P F + L L RM+++D + ++ S
Sbjct: 80 GSFSNFDDALAYFN---QMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
++ +++I+++ + ++ + F K FN L+ C + +
Sbjct: 137 C-SVYTLTILINCLCHLHLVGLGFSVLGKIFKLGF----KPSIITFNTLINGLCIEGRIV 191
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTA------------------------ 230
EA ++SR + P T +++ G + G +A
Sbjct: 192 EAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIII 251
Query: 231 ------------MEMFYHEMVLRGFRPSVVTYN--------------------------- 251
+++FYH M G P+VVTYN
Sbjct: 252 DSLCKNRLVNEAVDLFYH-MRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNM 310
Query: 252 --------IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
I +D CK+G +A+ +F +M ++A P + T ++LIHG ++
Sbjct: 311 KPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESST 370
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L +EM RN++PD+ ++ + + ++ A +++ M E+ + + VTY+++ G
Sbjct: 371 LLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYC 430
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
S ++ K++D M+ P + +L+K +C + R+D L+ + +G P+
Sbjct: 431 LHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSI 490
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQM 448
L++GLC GR A E K+M
Sbjct: 491 THTTLISGLCQAGRPYAAKELFKKM 515
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 139/313 (44%), Gaps = 27/313 (8%)
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGS-EEFNVLLQAFCTQKEMKEARSVFVKL-LSRFA 209
F ++++ L F++M V + F +FN LL A K S++ K+ +
Sbjct: 82 FSNFDDALAYFNQM-----VHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVS 136
Query: 210 PNNKTMNILL----------LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ T+ IL+ LGF G + + GF+PS++T+N I+G C
Sbjct: 137 CSVYTLTILINCLCHLHLVGLGFSVLGKIFKL----------GFKPSIITFNTLINGLCI 186
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G +AM + + P++ T T +++G + A +M + + +P++ +
Sbjct: 187 EGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVS 246
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y+ +I SL + R +N A++L M I VTY+++ +G+ S + L+ M+
Sbjct: 247 YSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEML 306
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P T +L+ C V L+++G +I P L+ G+C W+
Sbjct: 307 EWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWK 366
Query: 440 EAFECSKQMLVRR 452
E+ +ML R
Sbjct: 367 ESSTLLNEMLSRN 379
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 91/402 (22%), Positives = 165/402 (41%), Gaps = 44/402 (10%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
FD A + + +P + + +L+ + + + Y+ + + +ME F G+
Sbjct: 85 FDDALAYFNQMVHMNP-FPCITQFNQLLAALVRMKHYDSVVSIYRKME---FFGV-SCSV 139
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVT-AMEMFYH 236
+L+ C + SV K+ F P+ T N L+ G G + AME +
Sbjct: 140 YTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDY 199
Query: 237 EMVLRGFRPS-----------------------------------VVTYNIRIDGYCKKG 261
M RG++P+ VV+Y+I ID CK
Sbjct: 200 IMS-RGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNR 258
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ LF M + P++ T +LI+G QA LF EM + N+KPD+ ++
Sbjct: 259 LVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFS 318
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ +L + + A+ + +M + + D VTY ++ G+ KSS + L + M+
Sbjct: 319 ILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSR 378
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T + + FC V ++ +I+RG P+ + L+ G C + +EA
Sbjct: 379 NIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEA 438
Query: 442 FECSKQMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDRM 482
+ M+ + SY +L + Y +E + D M
Sbjct: 439 RKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEM 480
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 86/172 (50%), Gaps = 1/172 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C +M EAR VF ++++ AP+ + NIL+ G+ +S + + + EM
Sbjct: 422 YNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMS 481
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ +T+ I G C+ G A LF++M C P L T +TL+ G ++
Sbjct: 482 HKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLD 541
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+A LF+ + K LKP+ ++ + + L A EL + + + D
Sbjct: 542 EALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 72/139 (51%), Gaps = 1/139 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L++ +C + + EA+ +F ++ + PN+ T L+ G ++G A + + +M
Sbjct: 456 SYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P ++TY+ + G+CK G +A+ LFE +++ P+ L+ G +
Sbjct: 516 GSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKL 575
Query: 299 HQARQLFDEMPKRNLKPDI 317
A++LF + L+PD+
Sbjct: 576 EDAKELFSSLSIEELQPDV 594
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 72/178 (40%), Gaps = 35/178 (19%)
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
G N A F++M N P I +N ++++L+R + ++ + + +ME
Sbjct: 79 GGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKME------- 131
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
FFG+ C +Y T+ +L+ C V LG ++ G
Sbjct: 132 -------FFGVS--------CSVY-------------TLTILINCLCHLHLVGLGFSVLG 163
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ GF P + L+ GLC GR EA E ++ R Q + ++ M+ L +
Sbjct: 164 KIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCK 221
>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 629
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 172/390 (44%), Gaps = 15/390 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F ++ F P+ F K L +A+M F+ L +Q S L + SI
Sbjct: 67 AVDLFGDMVKSRPF-PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISH-DLYTYSIF 124
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF 201
++ + L +M K G E + LL +C K + +A ++
Sbjct: 125 INCFCRRSQLSLALAVLAKM--------MKLGYEPDIVTLSSLLNGYCHSKRISDAVALV 176
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+++ + P+ T L+ G + +MV RG +P +VTY ++G CK+
Sbjct: 177 DQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKR 236
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ L +ME ++ T+I R++ A LF EM + ++P++ Y
Sbjct: 237 GDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTY 296
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N++I+ L + A L+ M EK+I + VT++ + K L KL++ MI+
Sbjct: 297 NSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQ 356
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T T +L+ FC++ R+D ++ +++ + P+ + L+ G C R E+
Sbjct: 357 RSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVED 416
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
E ++M R + +Y + + QA
Sbjct: 417 GVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 147/338 (43%), Gaps = 16/338 (4%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ E ++ F ME + GIR +N L+ C +A + +
Sbjct: 264 IIDSLCKYRHVEVAVDLFTEMETK---GIRP-NVVTYNSLINCLCNYGRWSDASRLLSNM 319
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L + PN T N L+ F + G + E + EM+ R P +TYN+ I+G+C
Sbjct: 320 LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRL 379
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A ++F+ M CLP++QT TLI+G + + +LF EM +R L + Y +
Sbjct: 380 DEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTI 439
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + D ++A + +M R+ D +TY + GL L+ ++ + + +
Sbjct: 440 IQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEM 499
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+++ C +V W P + +++GLCS+ +EA +
Sbjct: 500 ELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQEADD 556
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
++M + +Y L++AN L D DR
Sbjct: 557 LFRKMKEDGTLPNSGTYNT----LIRAN----LRDCDR 586
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 102/216 (47%), Gaps = 4/216 (1%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +N L+ FC K +++ +F ++ R N T ++ GF ++GD + +M + +
Sbjct: 399 QTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQ 458
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV ++TY+I + G C G A+ +F+ +++ ++ T+I G
Sbjct: 459 MVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A LF + ++KPD+ YN MIS L R L A +L +M+E ++ TY+T
Sbjct: 519 VGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNT 575
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ ++ +L M FV T+ ++
Sbjct: 576 LIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 8/220 (3%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
L +++ + +++ K + E+ +E F M + VG + + ++Q F +
Sbjct: 395 LPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVG----NTVTYTTIIQGFFQAGDCD 450
Query: 196 EARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
A+ VF +++S P + T +ILL G G + + + + ++ YN I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+G CK G G+A LF + + P + T T+I G R + +A LF +M +
Sbjct: 511 EGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
P+ G YN +I + +R D A+ EL+ EM D T
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDAST 607
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 77/188 (40%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF +M + PS+ L+ + L ++M + D+ Y+ I
Sbjct: 66 DAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFI 125
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L+ A+ ++ +M + D VT ++ G S + L D+M+E +
Sbjct: 126 NCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYK 185
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ RG P +V GLC RG + A
Sbjct: 186 PDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNL 245
Query: 445 SKQMLVRR 452
+M R
Sbjct: 246 LNKMEAAR 253
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 69/163 (42%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF +M K P I +N ++S++ + + L ++M+ I HD TY
Sbjct: 64 VDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSI 123
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ S L + +M++ + P T+ L+ +C + R+ + L +++ G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ P L+ GL + EA QM+ R Q +Y
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTY 226
>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 634
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 5/357 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ L F ME + GIR ++ L+ C+ +A + +
Sbjct: 266 IIDSLCKYRHVDDALNLFKEMETK---GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM 321
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T N L+ F + G E Y +M+ R P + TYN ++G+C
Sbjct: 322 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 381
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++FE M C P + T TLI G + + +LF EM R L D Y +
Sbjct: 382 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 441
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L D + A ++ +M + D +TY + GL + LE +++D M + +
Sbjct: 442 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 501
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+++ C +VD G +L+ L +G P+ + +++GLCS+ +EA+
Sbjct: 502 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 561
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVAQ 500
K+M + +Y L R ++ +L R +++ + V T VA
Sbjct: 562 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 618
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 17/398 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M+ FD L +QR + L + +I+++ + L
Sbjct: 83 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTYNILINCFCRRSQISLALA 141
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+M K G E + LL +C K + +A ++ +++ + P+ T
Sbjct: 142 LLGKM--------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 193
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G + MV RG +P++VTY + ++G CK+G A+ L +ME
Sbjct: 194 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 253
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ T+I R++ A LF EM + ++P++ Y+++IS L +
Sbjct: 254 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 313
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L+ +M EK+I + VT++ + +K KLYD MI+ P T L+
Sbjct: 314 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 373
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D ++ +++ + P + L+ G C R E+ E ++M R
Sbjct: 374 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 433
Query: 456 SEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+Y L + L + ++ ++ K + + PP
Sbjct: 434 DTVTYTTLIQGLFH---DGDCDNAQKVFKQMVSDGVPP 468
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 11/352 (3%)
Query: 47 DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAF 106
D L LL + + ++ N + + + AL FK ++ P +
Sbjct: 240 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTY 298
Query: 107 EKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+ L + A +L+S + ++ +P+L+T ++ + KF E+ + D
Sbjct: 299 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD--DM 356
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFK 223
++R I I +N L+ FC + +A+ +F ++S+ P+ T N L+ GF
Sbjct: 357 IKRSIDPDIF-----TYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 411
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+S V + EM RG VTY I G G +A ++F++M P +
Sbjct: 412 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 471
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T + L+ G + +A ++FD M K +K DI Y MI + + ++ +L +
Sbjct: 472 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 531
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
K + + VTY+TM GL L+ L +M E +P + T L++
Sbjct: 532 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 583
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF M + LPS+ L+ ++ L ++M + + + YN +I
Sbjct: 68 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 127
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R ++ A+ L+ +M + VT ++ G + L D+M+E +
Sbjct: 128 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 187
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ RG P+ ++V GLC RG + A
Sbjct: 188 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 247
Query: 445 SKQM 448
+M
Sbjct: 248 LNKM 251
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 39/186 (20%), Positives = 82/186 (44%), Gaps = 1/186 (0%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF M K P I +N ++S++ + + + + L ++M+ I H TY+
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 125
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S + L +M++ + P T+ L+ +C R+ + L +++ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKL 476
+ P L+ GL + EA +M+ R Q + +Y ++ L + + + L
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 477 EDLDRM 482
L++M
Sbjct: 246 NLLNKM 251
Score = 38.5 bits (88), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 72/168 (42%), Gaps = 1/168 (0%)
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
G Y ++ + + L+ A+ L M + R V ++ + + K + V L ++
Sbjct: 51 GDYREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEK 110
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M + V T +L+ FC ++ L L L G ++ G+ P L L+ G C R
Sbjct: 111 MQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR 170
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
+A QM+ + ++ L L N A+E + +DRM++
Sbjct: 171 ISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQ 218
>gi|115460906|ref|NP_001054053.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|38344884|emb|CAD41907.2| OSJNBa0033G05.8 [Oryza sativa Japonica Group]
gi|113565624|dbj|BAF15967.1| Os04g0643700 [Oryza sativa Japonica Group]
gi|125591829|gb|EAZ32179.1| hypothetical protein OsJ_16385 [Oryza sativa Japonica Group]
gi|215701473|dbj|BAG92897.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704877|dbj|BAG94905.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 442
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 102/396 (25%), Positives = 183/396 (46%), Gaps = 17/396 (4%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYF 119
+PL +T V L L+A ++ +ALEFF ++ + PTP + + +L + F
Sbjct: 29 SPLDATAVLETLS-LYA--NDWRRALEFFHWSASPDGANVPPTPATVARAVDVLGKHFEF 85
Query: 120 DQAWELM-SH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
A L+ SH R PS L ++ +L+R++ ++ + AFD I G+R
Sbjct: 86 PLATSLLVSHHDPGRADPSFLR-PALRSLLNRLAAANLIDDAIRAFDSTAGSI--GLRDE 142
Query: 177 GSEEFNVLLQAFCTQKEMKEARSV-FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
S F+ L+ A C + + EA + F K F P KT N+LL G+ ++ + +
Sbjct: 143 AS--FHALVDALCDHRRVDEAHHLCFGKDPPPFPPVTKTYNLLLRGWAKTRAWARLRQLW 200
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M RG + +Y+I +D K G A ++F+EM++ + T IH GL
Sbjct: 201 FDMDSRGVAKDLHSYSIYMDALAKSGKPWKAFKVFKEMKQKGMAIDVVAYNTAIHSVGLA 260
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + A +L+ +M KP+ +N ++ L + + +M + I + +TY
Sbjct: 261 QGVDFAIRLYRQMVDAGCKPNASTFNTIVKLLCKEGRFKEGYAFVQQMHKFGIEPNVLTY 320
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
H F L + + V L+++M+E P+ T VML+K F + +W +
Sbjct: 321 HCFFQYLSRP---QEVLGLFEKMLERGCRPRMDTYVMLIKRFGRWGFLRPVFIVWKAMEK 377
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+G P A + L+ L +G + A + ++ML +
Sbjct: 378 QGLSPDAFAYNSLIDALLQKGMVDLARKYDEEMLSK 413
>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
Length = 543
Score = 118 bits (295), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 152/327 (46%), Gaps = 8/327 (2%)
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
S+ F + + + +F+RM R + +FN LL + K S+ ++ S
Sbjct: 34 SKSLHFNTIDGAISSFNRMLRMQ----PPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDS 89
Query: 207 -RFAPNNKTMNILLLGFK--ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
PN T++IL+ F G + + +M+ GFRP VVTY I+G CK G
Sbjct: 90 FGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNT 149
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+RL M + C P++ T+I R + +A LF EM + + PDI YN++
Sbjct: 150 SAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSL 209
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GK 382
I +L + L++EM + +I D V+++T+ L K + + D+MI+ G
Sbjct: 210 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGG 269
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P + L+ +C R+D + L+G + + P L+ GLC R ++A
Sbjct: 270 CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAI 329
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+M+ + + +YR+L YL +
Sbjct: 330 ALFHEMVACSQIPNLVTYRILLDYLCK 356
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/327 (23%), Positives = 139/327 (42%), Gaps = 3/327 (0%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+ EAF+ + GI +N L+ A C E K ++ +++ S+ P+ +
Sbjct: 183 QVTEAFNLFSEMVTKGISP-DIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 241
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N ++ + G VT +M+ RG P+V++YN I+GYCK AM LF EM
Sbjct: 242 NTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 301
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
R +P T +TLIHG V + A LF EM + P++ Y ++ L + R L
Sbjct: 302 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLA 361
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
AM L+ +E + D + G+ ++ LE L+ + P T +++
Sbjct: 362 EAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMI 421
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C +D L+ + + G +G + + G A + ++M+ R
Sbjct: 422 NGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFS 481
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDR 481
++ + + L ++ L+ + R
Sbjct: 482 ADASTMTLFVKMLSDDGLDQSLKQILR 508
>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
Length = 457
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 18/356 (5%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLL 185
+R P ++T +I+L K Y++ ++ D M R G +NV++
Sbjct: 61 RRCVPDVVT---YTILLEATCKRSGYKQAMKLLDEM--------RDKGCTPDIVTYNVVV 109
Query: 186 QAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
C + + +A F+K L + PN + NI+L G + E EM +G
Sbjct: 110 NGICQEGRVDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 168
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+VVT+N+ I C+KG A+ + E++ + C P+ + L+H + + +A
Sbjct: 169 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 228
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
D M R PDI +YN ++++L R +++ A+EL+ ++++K ++Y+T+ GL
Sbjct: 229 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 288
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K+ + +L + M+ P T + C R++ + +G + D G P+
Sbjct: 289 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 348
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ GLC R A + M+ +E++Y +L L ++ DL
Sbjct: 349 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 404
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 136/309 (44%), Gaps = 4/309 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N ++ +C ++ AR + ++ P+ T N L+ G G EM+
Sbjct: 3 YNAMVAGYCGAGQLDAARRLVAEM--PVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R P VVTY I ++ CK+ + AM+L +EM C P + T +++G +
Sbjct: 61 RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +P +P+ +YN ++ L A ELM EM +K + VT++ +
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L + +E ++ +++ + P + + L+ FC ++D + ++ RG P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDL 479
+ + L+T LC G + A E Q+ + SY + L +A E LE L
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300
Query: 480 DRMI-KNLQ 487
+ M+ K LQ
Sbjct: 301 NEMVSKGLQ 309
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 103/238 (43%), Gaps = 4/238 (1%)
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+ YN + GYC G A RL EM P T TLI G A + DE
Sbjct: 1 MAYNAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDE 57
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R PD+ Y ++ + + AM+L+DEM +K D VTY+ + G+ +
Sbjct: 58 MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
++ + + P T + +++K C R + L G + +G P+ ++
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
L++ LC +G E A E +Q+ + SY +L + Q ++ + LD M+
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 235
>gi|115436834|ref|NP_001043148.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|56201661|dbj|BAD73125.1| leaf protein -like [Oryza sativa Japonica Group]
gi|113532679|dbj|BAF05062.1| Os01g0506100 [Oryza sativa Japonica Group]
gi|215717162|dbj|BAG95525.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 541
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 90/360 (25%), Positives = 155/360 (43%), Gaps = 18/360 (5%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM----EREIFVGIR 174
F AW L+ T P L + + ++ R ++ L AF + +R + G
Sbjct: 86 FAAAWRLLLAPSPTPPPL---AAFAPLVRRYARLGRAPAALRAFQFLRRHPDRYMAGGDI 142
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-------APNNKTMNILLLGFKESGD 227
+ N+ + A C + + A V+L R+ P+ + NILL G+ +G
Sbjct: 143 PAAASLLNMAVDALCKEGHPRAA----VELFERWRREEPDSPPDERAYNILLHGWSRAGR 198
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ + + EM L G RP+VVTY I+G C K A+ L +EM +L T
Sbjct: 199 LDKVGKLWAEMRLAGVRPTVVTYGTLIEGLCVKRRPDQAIALLDEMREEGIEANLLTCNP 258
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
+++ A ++ ++ P + P+I +N+++ + DL A ++ M E+
Sbjct: 259 IVYALAQAGRFQDAHKVLEKFPLYGVAPNISTFNSLVMGYCKHGDLAGASSVLKVMTERG 318
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I TY+ F K+S +E Y +MI + P T V+L+K R++L +
Sbjct: 319 ISPTTRTYNYFFMTFAKNSDVESGMNFYSKMIGNGYSPDQLTYVLLVKMLSRANRLELVV 378
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ + GF P +L+ LC R ++EEA + M R +Y+ L R L
Sbjct: 379 QMIQEMRTHGFEPDLATSTMLIHLLCRRHQFEEACAEFEDMFKRGIVPQYITYQKLMREL 438
>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial; Flags: Precursor
Length = 602
Score = 117 bits (294), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + + + + F ME + GI K +N L++ C + + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK---GI-KSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++SR PN T N+LL F + G + Y EM+ RG P+++TYN +DGYC +
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A + + M R C P + T T+LI G +V+ + ++F + KR L + Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + + A EL EM + D +TY + GL + LE ++++ + +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K +++ C +V+ NL+ L +G P+ ++++GLC +G EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 442 FECSKQMLVRRRQVSEASYRMLQR 465
++M ++ +Y L R
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIR 551
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 173 IRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGD 227
+ K G E FN L++ + ++ EA + +++ P+ T N ++ G SGD
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ +M R + V TY+ ID C+ GC A+ LF+EME S+ T +
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ G + L +M R + P++ +N ++ ++ L A EL EM +
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + +TY+T+ G + L + D M+ K P T L+K +C+ RVD G+
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ + RG + +LV G C G+ + A E ++M+ +Y +L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 468 VQANANEKLEDLDRMIKNLQ 487
N KLE + ++LQ
Sbjct: 449 CD---NGKLEKALEIFEDLQ 465
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L++ +C K + + VF + R N T +IL+ GF +SG + E + EMV
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TY I +DG C G A+ +FE++++ + TT+I G +
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP++ Y MIS L + L+ A L+ +MEE ++ TY+T+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
++ L KL + M F ++ M++
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 121/264 (45%), Gaps = 12/264 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++FN++L FC Q E L+ A N T+NI++ F +
Sbjct: 101 TKQFNLVLD-FCKQLE-----------LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
++ G+ P T+N I G +G +A+ L + M C P + T ++++G +
Sbjct: 149 VMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGD 208
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L +M +RN+K D+ Y+ +I SL R ++AA+ L EME K I VTY++
Sbjct: 209 TSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ L M+ + VP T +L+ F ++ L+ +I RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ + L+ G C + R EA
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEA 352
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
F ++ L G ++ T NI I+ +C+ K CF A + ++ ++ P T TLI G
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLIKG 167
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + +A L D M + +PD+ YN++++ + R D + A++L+ +MEE+ + D
Sbjct: 168 LFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKAD 227
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY T+ L + ++ L+ M T L++ C + + G L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQA 470
++ R P+ ++L+ G+ +EA E K+M+ R + +Y ++ Y +Q
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 471 NANEKLEDLDRMIKN 485
+E LD M++N
Sbjct: 348 RLSEANNMLDLMVRN 362
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 81/206 (39%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF+EM R LPSL + + + ++ + +I N MI
Sbjct: 71 DAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RC A ++ ++ + D T++T+ GL + L DRM+E
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ 190
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C + L L+L + +R ++ LC G + A
Sbjct: 191 PDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M + + S +Y L R L +A
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKA 276
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++F I K G + +++L+Q FC ++K A +F +++S P+ T ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 223 KESGDV-TAMEMF----------------------------------YHEMVLRGFRPSV 247
++G + A+E+F + + +G +P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+TY + I G CKKG +A L +ME P+ T TLI ++ + +L +E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 308 MPKRNLKPDIGAYNAMISSLI 328
M D + +I L+
Sbjct: 569 MKSCGFSADASSIKMVIDMLL 589
>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
Length = 624
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/310 (27%), Positives = 145/310 (46%), Gaps = 13/310 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-----APNNKTMNILLLGFKESGDVTAMEMFY 235
F +LL+ C ++++AR +LL R P++ N L+ G+ ++ D F
Sbjct: 13 FAILLRGLCRSNQLEKAR----QLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFL 68
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EMV P+VVTY +DG CK G DA++L +EM C P++ T ++ G
Sbjct: 69 AEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEE 128
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
R + +A+++ +EM R PD+ YN+ I L +C ++ A + + M + D V+Y
Sbjct: 129 RKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSY 185
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ GL KS L+ ++ D+M P T L+ FC V+ + L ++
Sbjct: 186 TTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLK 245
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
G P+ A + L+ L G +A + +M R SY L +A +K
Sbjct: 246 LGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKK 305
Query: 476 LEDL-DRMIK 484
+ + DRM++
Sbjct: 306 AKAVFDRMVE 315
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 179/423 (42%), Gaps = 26/423 (6%)
Query: 70 ENVLGRLFAAHSNGLKALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
+ + L + +S + FKF + H PT + + L + A +L+
Sbjct: 45 DAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLD 104
Query: 128 HV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNV 183
+ + P++ T + L K ++ LE + +R + + +N
Sbjct: 105 EMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEE---------MAVRGYFPDVVTYNS 155
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++ C + EAR K L+R P+ + ++ G +SGD+ + +M R
Sbjct: 156 FIKGLCKCDRVDEAR----KFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNR 211
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P VVTY+ IDG+CK G AM L + M ++ C P++ +L+ + +I +A
Sbjct: 212 GCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKA 271
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ EM +R PD+ +YNA I L + + A + D M E+ + +Y +
Sbjct: 272 EDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEE 331
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC-P 420
L K L+ L ++ E + +L+ C R D L+ ++D C P
Sbjct: 332 LCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 391
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
++++ C R + ++A + KQML R + ++ +L L +++L D +
Sbjct: 392 DVFFYNVMLDSHCKRRQIDKALQIHKQML-ERNCCNVVTWNILVHGLC---VDDRLSDAE 447
Query: 481 RMI 483
M+
Sbjct: 448 TML 450
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 98/240 (40%), Gaps = 3/240 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ T ILL G S + M G P YN I GY K FG A +
Sbjct: 8 PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EM + CLP++ T T ++ G A +L DEM + P+I YN ++ L
Sbjct: 68 LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
R L+ A ++++EM + D VTY++ GL K ++ K RM P +
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVS 184
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ C + +D + + +RG P L+ G C G E A ML
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 129/299 (43%), Gaps = 12/299 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
TP ++ + L + + D A L+ + + ++ + +++L + K ++E
Sbjct: 319 TPNASSYSMLVEELCKKKELDDAITLVEQAREKY-QIVDILLYTVLLDGLCKGGRFDEAC 377
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILL 219
F ++ E F +NV+L + C ++++ +A + ++L R N T NIL+
Sbjct: 378 ALFSKVLDEKICEPDVF---FYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVVTWNILV 434
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G ++ E MV GF P VTY +D CK G A+ LFEE + C+
Sbjct: 435 HGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCV 494
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P + T + LI G +A LF K D+ +NAMI + ++L
Sbjct: 495 PDVVTYSALITGLVHENMAEEAYLLF-------TKLDVALWNAMILGYAENGSGDLGLKL 547
Query: 340 MDEMEEKRIGHDNVTYHTMFFG-LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
E+ E + + T+ G L+K+ L L+DR ++G F P L+ F
Sbjct: 548 FVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFPDLFVANTLIDVF 606
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 150/356 (42%), Gaps = 13/356 (3%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSR 148
KF + P TP ++ ++ L + D A ++ + P ++T S+
Sbjct: 171 KFLARMP-VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSL------ 223
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
I F E A ++ + +G R +N LL A + +A + V++ R
Sbjct: 224 IDGFCKGGEVERAMGLLDSMLKLGCRP-NMVAYNSLLGALHRLGHIGKAEDMLVEMERRG 282
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F P+ + N + G ++ V + + MV RG P+ +Y++ ++ CKK DA+
Sbjct: 283 FTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAI 342
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE-MPKRNLKPDIGAYNAMISS 326
L E+ + + T L+ G +A LF + + ++ +PD+ YN M+ S
Sbjct: 343 TLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDS 402
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ R ++ A+++ +M E+ + VT++ + GL L + M++ F+P
Sbjct: 403 HCKRRQIDKALQIHKQMLERNCCN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPD 461
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
T L+ C + L L+ + G P L+TGL EEA+
Sbjct: 462 FVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAY 517
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 100/248 (40%), Gaps = 4/248 (1%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+ + +P T+ I + G C+ A +L M+ + C+P LI G ++
Sbjct: 1 MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
QA + EM K + P + Y ++ L + A++L+DEM +K + TY+
Sbjct: 61 FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL + L+ K+ + M + P T +K C RVD +L
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVD---EARKFLARMP 177
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-L 476
P + ++ GLC G + A QM R +Y L + E+ +
Sbjct: 178 VTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237
Query: 477 EDLDRMIK 484
LD M+K
Sbjct: 238 GLLDSMLK 245
>gi|125559559|gb|EAZ05095.1| hypothetical protein OsI_27286 [Oryza sativa Indica Group]
Length = 551
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 149/329 (45%), Gaps = 9/329 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + + F+ M+ + G F ++ ++ A+C ++ A
Sbjct: 212 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYF----YSSVINAYCRAGNVRRA 267
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN T L+ GF + G + A EM +M +RG + + +N IDG
Sbjct: 268 SEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 327
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+K A+ + ME++ + T TL G + +A+ L M ++ ++P+
Sbjct: 328 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 387
Query: 317 IGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
+Y +IS I C D+ A L EM VTY+ M G +K + +
Sbjct: 388 HVSYTTLIS--IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 445
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
M + VP + L+ CVN +VD+ L L+ + RG P+ A L++GL
Sbjct: 446 KKEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 505
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
GR EEAF+ ML +A Y L
Sbjct: 506 EGRSEEAFQLYDNMLGDGLTPDDALYSAL 534
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 76/148 (51%), Gaps = 1/148 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +M EAR +F ++ A P+ T N+++ G+ + G + E F EM
Sbjct: 391 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKKEME 450
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P + +Y + G+C G A+RLFEEM++ P+L T LI G
Sbjct: 451 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 510
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSL 327
+A QL+D M L PD Y+A++ SL
Sbjct: 511 EAFQLYDNMLGDGLTPDDALYSALVGSL 538
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 140/333 (42%), Gaps = 7/333 (2%)
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ D A +L+ + P +T S S+++ K + D M R G+ K
Sbjct: 122 HLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRH---GV-KVN 177
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ +N LL A+ +K+ + + +K++ P T IL+ G + D+T +E +
Sbjct: 178 ALCYNSLLDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 236
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM + V Y+ I+ YC+ G A +F+E P+ T LI+G +
Sbjct: 237 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 296
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A L +M R + + +N MI R ++ A+E+ ME+ I D TY
Sbjct: 297 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 356
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ GL +++ ++ L MIE P + L+ C + L+ +
Sbjct: 357 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 416
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P ++++ G +G EA K+M
Sbjct: 417 NGAEPSLVTYNVMMDGYIKKGSIREAERFKKEM 449
>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
thaliana]
Length = 596
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/357 (24%), Positives = 156/357 (43%), Gaps = 5/357 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + K++ ++ L F ME + GIR ++ L+ C+ +A + +
Sbjct: 228 IIDSLCKYRHVDDALNLFKEMETK---GIRP-NVVTYSSLISCLCSYGRWSDASQLLSDM 283
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T N L+ F + G E Y +M+ R P + TYN ++G+C
Sbjct: 284 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRL 343
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++FE M C P + T TLI G + + +LF EM R L D Y +
Sbjct: 344 DKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 403
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L D + A ++ +M + D +TY + GL + LE +++D M + +
Sbjct: 404 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEI 463
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+++ C +VD G +L+ L +G P+ + +++GLCS+ +EA+
Sbjct: 464 KLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYA 523
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQVAQ 500
K+M + +Y L R ++ +L R +++ + V T VA
Sbjct: 524 LLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLVAN 580
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 175/398 (43%), Gaps = 17/398 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M+ FD L +QR + L + +I+++ + L
Sbjct: 45 PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEI-VHGLYTYNILINCFCRRSQISLALA 103
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+M K G E + LL +C K + +A ++ +++ + P+ T
Sbjct: 104 LLGKM--------MKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITF 155
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G + MV RG +P++VTY + ++G CK+G A+ L +ME
Sbjct: 156 TTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEA 215
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+ T+I R++ A LF EM + ++P++ Y+++IS L +
Sbjct: 216 AKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSD 275
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L+ +M EK+I + VT++ + +K KLYD MI+ P T L+
Sbjct: 276 ASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVN 335
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
FC++ R+D ++ +++ + P + L+ G C R E+ E ++M R
Sbjct: 336 GFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVG 395
Query: 456 SEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+Y L + L + ++ ++ K + + PP
Sbjct: 396 DTVTYTTLIQGLFH---DGDCDNAQKVFKQMVSDGVPP 430
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/352 (23%), Positives = 151/352 (42%), Gaps = 11/352 (3%)
Query: 47 DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAF 106
D L LL + + ++ N + + + AL FK ++ P +
Sbjct: 202 DTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK-EMETKGIRPNVVTY 260
Query: 107 EKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+ L + A +L+S + ++ +P+L+T ++ + KF E+ + D
Sbjct: 261 SSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYD--DM 318
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFK 223
++R I I + N L+ FC + +A+ +F ++S+ P+ T N L+ GF
Sbjct: 319 IKRSIDPDIFTY-----NSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFC 373
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+S V + EM RG VTY I G G +A ++F++M P +
Sbjct: 374 KSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIM 433
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T + L+ G + +A ++FD M K +K DI Y MI + + ++ +L +
Sbjct: 434 TYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSL 493
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
K + + VTY+TM GL L+ L +M E +P + T L++
Sbjct: 494 SLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIR 545
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/184 (22%), Positives = 78/184 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF M + LPS+ L+ ++ L ++M + + + YN +I
Sbjct: 30 DAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILI 89
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R ++ A+ L+ +M + VT ++ G + L D+M+E +
Sbjct: 90 NCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYR 149
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ ++ + + L ++ RG P+ ++V GLC RG + A
Sbjct: 150 PDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNL 209
Query: 445 SKQM 448
+M
Sbjct: 210 LNKM 213
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 75/172 (43%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF M K P I +N ++S++ + + + + L ++M+ I H TY+
Sbjct: 28 LDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNI 87
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + S + L +M++ + P T+ L+ +C R+ + L +++ G
Sbjct: 88 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ P L+ GL + EA +M+ R Q + +Y ++ L +
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCK 199
>gi|255660858|gb|ACU25598.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 418
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/319 (27%), Positives = 141/319 (44%), Gaps = 17/319 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A++ F+ T +H + P D K L L +++YF W+ + + +P+ +L +I
Sbjct: 85 AIQCFRLTKKHKFWVPF-DTCRKVLEHLMKLKYFKLVWDFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R + +F I K+G FN L+ + ++ E R
Sbjct: 142 VMHRFCK--------EGEMRRAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + V ++EM+ RG P+ VT+ ID +CK
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M P L T TLI+G ++ Q R L DEM LKPD
Sbjct: 254 NGMVDSAMEIYKQMLSQGFSPDLITYNTLIYGLCKKGDLKQVRALIDEMSMNGLKPDKIT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I DNV Y + GL + + K++ M+
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRLDNVAYTALVSGLCQEGRADDAEKMFREML 373
Query: 380 EGKFVPKTRTVVMLMKFFC 398
P T M++ FC
Sbjct: 374 SVGLKPDNGTYTMIINEFC 392
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 89/203 (43%), Gaps = 35/203 (17%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G EM R
Sbjct: 123 FYKEILECGYPASLYFFNIVMHRFCKEG----------EMRR------------------ 154
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
A+ +FD + K L+P + ++N +++ IR DL+ L M + D
Sbjct: 155 -------AQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVY 207
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + GL K S ++ +L++ M++ VP T L+ C N VD + ++ +
Sbjct: 208 TYSVLINGLCKESKVDEANELFNEMLDRGLVPNGVTFTTLIDVHCKNGMVDSAMEIYKQM 267
Query: 414 IDRGFCPHGHALDLLVTGLCSRG 436
+ +GF P + L+ GLC +G
Sbjct: 268 LSQGFSPDLITYNTLIYGLCKKG 290
Score = 45.8 bits (107), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R +N L+ G + G E + E
Sbjct: 314 YTTLIDGCCKEGDLETAFEFRKRMIKESIRL--DNVAYTALVSGLCQEGRADDAEKMFRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P TY + I+ +CKKG A RL +EM+R +P + T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVRTASRLLKEMQRDGHVPCVVT 418
>gi|255582957|ref|XP_002532249.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528067|gb|EEF30143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 507
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/439 (24%), Positives = 195/439 (44%), Gaps = 21/439 (4%)
Query: 45 FPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPTP 103
+ D P L L Q P T+ E+++ ++ H + K AL FF + +
Sbjct: 59 YRDSPTRKIELA-LTQCNP---TVTEDLILKVLKRHRSDWKPALIFFNWVSKGGKVLMGS 114
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
A+ + L IL +MR FD+ +++ + L+ ++ ++++R + EE +E F+
Sbjct: 115 GAYNEILDILGKMRRFDELSQVLD-IMSKREGLVNEETYRVLVNRYAAAHKVEEAIEIFN 173
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK 223
R+I + I F LL C K ++ A S+ F + KTMNI+L G+
Sbjct: 174 -TRRDIGLEIDLVS---FQNLLMFLCRYKHVQIAESLLYSKGKDFGMDIKTMNIVLNGWC 229
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
G+V + F+ +++ +P + TY I KKG G A++++ M C P +
Sbjct: 230 VLGNVHEAKRFWKDIIGSKCKPDLFTYGTFIKALTKKGKLGTALKIYRAMWEKQCKPDVV 289
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+I + +A ++F EM ++ P+ YN++I R R + EL+DEM
Sbjct: 290 ICNCIIDALCFKNRVPEALEVFREMSQQGCLPNGATYNSLIKHFSRIRRMEKVYELLDEM 349
Query: 344 EEKRIG--HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+K+ D++T++ + L K L V +RM + T T ++++ +
Sbjct: 350 LDKKGSCMPDHITFNYLLKALKKPEELPLV---LERMERNGCMISTDTYNLILRLYADWD 406
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
+ + W + G P + +++ L +GR +A +M + VSE
Sbjct: 407 CEERVGDTWNEMEKLGLGPDRRSYTIMIHWLYEKGRINDALHYFGEM-TSKGMVSEPRTE 465
Query: 462 MLQRYLVQANANEKLEDLD 480
ML ++ N KL+D D
Sbjct: 466 ML-----VSSMNMKLKDND 479
>gi|410109905|gb|AFV61032.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
rugosa]
Length = 414
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 157/353 (44%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 74 AIECYRLTXEHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 130
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 131 LMHRFCK--------DGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 182
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ V + IDG+C
Sbjct: 183 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF-DEMLVKGLVPNXVXFTTLIDGHC 241
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 242 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKI 301
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL++A E M ++ D V Y + GL K+ M
Sbjct: 302 TYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEGRSVDAEKMLREM 361
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 362 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 119/263 (45%), Gaps = 4/263 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 171
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ + + A EL DEM K + + V
Sbjct: 172 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 231
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 232 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 291
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ E Y L L
Sbjct: 292 SXKGLKPDKITYTTLIDGCCKEGDLDSAFEHXKRMIQENXRLDEVXYTALISGLCXEG-- 349
Query: 474 EKLEDLDRMIKNLQAV-LPPPTR 495
+ D ++M++ + +V L P R
Sbjct: 350 -RSVDAEKMLREMLSVGLKPDAR 371
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 20/324 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR---------FAPNNKTMNI----------LLLG 221
+ ++ CT + + EA+S+ ++SR FA +T L+
Sbjct: 5 YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 64
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ ESG + Y F T ++ K F +EE+ S
Sbjct: 65 YLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 124
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
L L+H +I A+ +FD + K L+P + +YN +++ IR DL+ L
Sbjct: 125 LYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 184
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + D TY + G K S + +L+D M+ VP L+ C N
Sbjct: 185 AMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNG 244
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY- 460
RVDL + ++ ++ + P + L+ GLC +G ++A +M + + + +Y
Sbjct: 245 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYT 304
Query: 461 RMLQRYLVQANANEKLEDLDRMIK 484
++ + + + E RMI+
Sbjct: 305 TLIDGCCKEGDLDSAFEHXKRMIQ 328
>gi|449437378|ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
gi|449503560|ref|XP_004162063.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial-like [Cucumis sativus]
Length = 615
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 104/424 (24%), Positives = 183/424 (43%), Gaps = 43/424 (10%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
SS+L+E V F + L +L F + + F P+ F + +++LA+ R FD AW
Sbjct: 119 SSSLLEAVFDH-FDSSPKFLHSL--FLWAAKKSGFRPSAALFNRLINVLAKSREFDSAWS 175
Query: 125 LMSHVQRTHPS--LLTLKSMSIMLSRISKFQSYEETLEAFD-RMEREIFVGIRKFGSEE- 180
L++ R L++++ I++ R ++ + + ++ E G GSE
Sbjct: 176 LITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYEFACNLETISGT---GSEGL 232
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
F +LL + C + ++ A F N K +E G
Sbjct: 233 FEILLDSLCKEGHVRVASEYF---------NRK---------REMGS------------- 261
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
F PS+ YNI I+G+ + A RL+ EM++ P++ T TLI G +R++
Sbjct: 262 -SFEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEI 320
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L DEM + ++P+ YN ++ +L A+ +M+ G TY+++
Sbjct: 321 AIELVDEMRREGIEPNAIVYNPIVDALGEAGRFKEALGMMERFMVLEQGPTISTYNSLVK 380
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K+ L G K+ MI F P T +FF +++ ++L+ +I+ G+ P
Sbjct: 381 GYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKMIESGYAP 440
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLEDL 479
LL+ LC R A + +M R + A+ ML L + + E +
Sbjct: 441 DKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKFEEAFAEF 500
Query: 480 DRMI 483
+ MI
Sbjct: 501 EHMI 504
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 114/285 (40%), Gaps = 14/285 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P+ A+ ++ R R A L +++ S T+ + ++ + +S E
Sbjct: 263 FEPSIRAYNILINGWFRSRKLKHAQRLWFEMKKNKISP-TVVTYGTLIEGYCRMRSVEIA 321
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-----APNNK 213
+E D M RE GI + +N ++ A KEA + ++ RF P
Sbjct: 322 IELVDEMRRE---GIEP-NAIVYNPIVDALGEAGRFKEA----LGMMERFMVLEQGPTIS 373
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G+ ++GD++ M+ RGF P+ TYN + K G ++M L+ +M
Sbjct: 374 TYNSLVKGYCKAGDLSGASKILKMMIGRGFTPTPTTYNYFFRFFSKYGKIEESMSLYNKM 433
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
P T L+ ++ A Q+ +EM R D+ ++ L +
Sbjct: 434 IESGYAPDKLTYHLLLKMLCEEERLNLAVQVCNEMKARGFDMDLATSTMLMHLLCKMHKF 493
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
A + M + I +T+ + MK + KL + M
Sbjct: 494 EEAFAEFEHMIHRGIVPQYLTFCRLHDEFMKRGLTKMASKLQEMM 538
>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
mitochondrial-like [Vitis vinifera]
Length = 819
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 153/344 (44%), Gaps = 11/344 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P + + + R FD+ ++++ +++ P++++ + L + + E
Sbjct: 460 PNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVI 519
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
L D + R + ++ +N+L+ C ++K+A F ++++R P T NI
Sbjct: 520 LG--DMVHRGVVPN-----AQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNI 572
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G V E E+ +G V+TYN I GY G A+ L+E M++
Sbjct: 573 LINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSG 632
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P+L T LI G G + +++ EM + NL PD YNA+I + D+ A
Sbjct: 633 IKPTLNTYHRLIAGCG-KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKAC 691
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L ME + I D +TY+ + G K + V L + M +PKT T +L+
Sbjct: 692 SLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGH 751
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C D + + + GF P D L+TGL GR +A
Sbjct: 752 CKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 154/354 (43%), Gaps = 39/354 (11%)
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV-----------GIRKFG 177
V+ P+++T S+ L+ + + Q EE + ME FV G K G
Sbjct: 280 VENVEPTIITFNSL---LNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCG 336
Query: 178 --------SEE------------FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
SEE ++LL A C + M++A V K L AP N
Sbjct: 337 NVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFN 396
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G+ + GD+ +M G RP+ VTYN + +C+ +A + ++M
Sbjct: 397 TIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEK 456
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN-- 334
LP+++T TLI G G + Q+ +EM K+ LKP++ +Y +I+ L C+D N
Sbjct: 457 GVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCL--CKDANIL 514
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A ++ +M + + + Y+ + G + L+ + +D M+ + VP T +L+
Sbjct: 515 EAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILI 574
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C +V NL + +G + L++G S G ++A E + M
Sbjct: 575 NGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETM 628
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 141/340 (41%), Gaps = 38/340 (11%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+A+ +E+ VG+R +N L++ FC K M+EA K++ + PN +T N L
Sbjct: 410 KAYTTIEKMEAVGLRP-NHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTL 468
Query: 219 LLGFKES-----------------------------------GDVTAMEMFYHEMVLRGF 243
+ G+ S ++ E+ +MV RG
Sbjct: 469 IDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGV 528
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+ YN+ IDG C G DA R F+EM +P+L T LI+G + +A
Sbjct: 529 VPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAEN 588
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L E+ ++ L D+ YN++IS ++ A+EL + M++ I TYH + G
Sbjct: 589 LASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCG 648
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K GL V K+Y M++ VP L+ + + V +L + +G P
Sbjct: 649 K-EGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKM 707
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ G GR + M +R +Y +L
Sbjct: 708 TYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDIL 747
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 158/362 (43%), Gaps = 11/362 (3%)
Query: 92 FTLQHPHFTPTPDAF-EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+TL TP F + L I + + ++ EL + + L ++ S+++ L +
Sbjct: 100 YTLFSLSSTPMKPLFSDMLLSICSESKMVSESAELY-MLMKKDGVLPSVASLNLFLESLV 158
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLL-SR 207
+ YE+TL+ F + + G+R ++F +QA ++K A + +
Sbjct: 159 STKRYEDTLQLFSEI---VESGLR---PDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGG 212
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+P N+++ G + + E + EM+ R P+ +TYN IDGYCK G +A
Sbjct: 213 VSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAF 272
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ E M+ P++ T +L++G + + +A+++ +EM PD Y +
Sbjct: 273 NIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGH 332
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
++C +++A++ L +E K + + T + L K +E ++ + +E P
Sbjct: 333 LKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVG 392
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
++ +C ++ + G P+ + LV C EEA +C K+
Sbjct: 393 VFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKK 452
Query: 448 ML 449
M+
Sbjct: 453 MV 454
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/231 (21%), Positives = 93/231 (40%), Gaps = 38/231 (16%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
++ L+ M++ LPS+ ++ + + QLF E+ + L+PD Y I
Sbjct: 130 ESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAI 189
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++ DL A+ELM M+ + Y+ + GL K ++ KL+D M+
Sbjct: 190 QAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEML----- 244
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
DR P+ + L+ G C G+ EEAF
Sbjct: 245 ------------------------------DRRVAPNRITYNTLIDGYCKVGQLEEAFNI 274
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
++M V + + ++ L L +A + +E+ R+++ ++ P R
Sbjct: 275 RERMKVENVEPTIITFNSLLNGLCRA---QMMEEAQRVLEEMEVYGFVPDR 322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 1/129 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + ++++A S+ + ++ P+ T N L+LG + G + ++ ++M
Sbjct: 674 YNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMK 733
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+RG P TY+I I G+CK F A + EM PS+ LI G H
Sbjct: 734 IRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLREEGRSH 793
Query: 300 QARQLFDEM 308
A + EM
Sbjct: 794 DADVICSEM 802
>gi|225451367|ref|XP_002263590.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680 [Vitis vinifera]
gi|296087085|emb|CBI33459.3| unnamed protein product [Vitis vinifera]
Length = 592
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 114/490 (23%), Positives = 200/490 (40%), Gaps = 68/490 (13%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA---LEFFKFTLQHPHFTPT 102
P +PLH +L + LP TP N L L + + L L FFK+ HF +
Sbjct: 50 PTKPLHSSLKRILPSLTP-------NHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLS 102
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHV-------------------QRTHPSLLTLKSMS 143
++ H L + +A L+ V + TH S L S
Sbjct: 103 IHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF---S 159
Query: 144 IMLSRISKFQSYEETLEAF-------------------DR-MEREIFVGIRKFGSE---- 179
++++ + + + ++ F DR M+ + F E
Sbjct: 160 VLMNAYTDSGYFSDAIQCFRLVRKHNLQIPFHSCGYLFDRLMKLNLTSPAWAFYEEILDC 219
Query: 180 -------EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
+FNVL+ C + ++ EA+ +F ++ R P + N L+ G+ +SG++
Sbjct: 220 GYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGNLDQG 279
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
M+ P V TY++ I+G CK+G DA +LF EM +P+ T TTLI+G
Sbjct: 280 FRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLING 339
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ +++ +M ++ +KPD+ YN +I+ L + DL A +L+ EM ++ + D
Sbjct: 340 HCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPD 399
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY + G K LE ++ M++ L+ FC +V
Sbjct: 400 KFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLR 459
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-- 469
+++ G P +++ G C +G + F+ K+M +Y +L L +
Sbjct: 460 EMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQG 519
Query: 470 --ANANEKLE 477
NAN L+
Sbjct: 520 QMKNANMLLD 529
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 119/261 (45%), Gaps = 1/261 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ C + ++ +A +F+++ R PN+ T L+ G +G Y +M+
Sbjct: 298 YSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQML 357
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P V+TYN I+G CK G +A +L EM + P T T LI G ++
Sbjct: 358 RKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLE 417
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ EM K ++ D A+ A+IS R + A + EM E I D+ TY +
Sbjct: 418 SALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVI 477
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ KL M VP T +L+ C ++ L +++ G
Sbjct: 478 HGFCKKGDVKTGFKLLKEMQCDGHVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVV 537
Query: 420 PHGHALDLLVTGLCSRGRWEE 440
P ++L+ G C G E+
Sbjct: 538 PDDITYNILLEGHCKHGNRED 558
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 53/114 (46%), Gaps = 2/114 (1%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSR 207
IS F + +EA +R RE+ K + +++ FC + ++K + ++
Sbjct: 442 ISGFCREGQVIEA-ERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDG 500
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
P T N+LL G + G + M M+ G P +TYNI ++G+CK G
Sbjct: 501 HVPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLEGHCKHG 554
>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900-like [Glycine max]
Length = 903
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/423 (25%), Positives = 174/423 (41%), Gaps = 12/423 (2%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
SSTL N+L + + S A+ K + + P L+ L ++R F W
Sbjct: 152 FSSTLGFNLLVQNYVLSSRIFDAVVIVKLMFAN-NLLPEVRTLSALLNGLLKVRKFITVW 210
Query: 124 ELM--SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
EL S P T ++ + + F +E + ME F +
Sbjct: 211 ELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIR---WMEANGF----DLSIVTY 263
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
NVL+ C + EA V L + A + T L+LGF A EMV
Sbjct: 264 NVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVE 323
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF P+ + +DG K+G DA L ++ R +P+L LI+ ++ +
Sbjct: 324 LGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDK 383
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L+ M NL+P+ Y+ +I S R L+ A+ D M + IG Y+++
Sbjct: 384 AELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLIN 443
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K L L+ M P T L+ +C + +V L+ +ID G P
Sbjct: 444 GQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITP 503
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDL 479
+ + L++GLCS + EA E +++ R+ + +E +Y +L + Y ++ E L
Sbjct: 504 NVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELL 563
Query: 480 DRM 482
+ M
Sbjct: 564 EDM 566
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 16/341 (4%)
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLSRF 208
+ Q +E ++ D M + +G F E V L+ Q ++ +A + VK+ RF
Sbjct: 307 RLQQFEAGIQLMDEM---VELG---FSPTEAAVSGLVDGLRKQGKIDDAYELVVKV-GRF 359
Query: 209 A--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
PN N L+ + GD+ E+ Y M L RP+ +TY+I ID +C+ G A
Sbjct: 360 GFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVA 419
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ F+ M + ++ +LI+G ++ A LF EM + ++P + ++IS
Sbjct: 420 ISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISG 479
Query: 327 LIRCRDLNA--AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
C+DL A +L ++M + I + T+ + GL ++ + +L+D ++E K
Sbjct: 480 Y--CKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIK 537
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +L++ +C + ++D L + +G P + L++GLCS GR +A +
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIK 484
+ + +++E Y +L Y + E L MI+
Sbjct: 598 IDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQ 638
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 154/366 (42%), Gaps = 18/366 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIML---SRISKFQSY 155
PT + + R D+A+EL+ H + P T + + L R+SK + +
Sbjct: 538 PTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDF 597
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ L + E+ ++ LL +C + + EA S +++ R +
Sbjct: 598 IDDLHKQNVKLNEMC----------YSALLHGYCQEGRLMEALSASCEMIQRGINMDLVC 647
Query: 216 NILLL-GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+ +L+ G + D +M +G RP V Y ID Y K+G F A ++ M
Sbjct: 648 HAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMV 707
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P++ T T L++G + +A LF M N+ P+ Y + +L + ++
Sbjct: 708 TEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMK 767
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+ L M + + + VT++ + G K K+ M E P T L+
Sbjct: 768 EAIGLHHAMLKGLLA-NTVTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLI 826
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C + V + LW +++RG P A +LL+ G C G ++AFE ML RR
Sbjct: 827 YEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDML-RRGI 885
Query: 455 VSEASY 460
+ + Y
Sbjct: 886 IPDNKY 891
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/435 (21%), Positives = 169/435 (38%), Gaps = 85/435 (19%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK----SMSIMLSRISKFQS 154
F P + ++ L + D+A L S++ SL+ L+ + SI++ +
Sbjct: 361 FVPNLFVYNALINSLCKGGDLDKAELLYSNM-----SLMNLRPNGITYSILIDSFCRSGR 415
Query: 155 YEETLEAFDRMERE-----------IFVGIRKFG--------------------SEEFNV 183
+ + FDRM ++ + G KFG + F
Sbjct: 416 LDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTS 475
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ +C ++++A ++ K++ PN T L+ G + + + E+V R
Sbjct: 476 LISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERK 535
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+P+ VTYN+ I+GYC+ G A L E+M + +P T LI G + +A+
Sbjct: 536 IKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAK 595
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
D++ K+N+K + Y+A++ + L A+ EM ++ I D V + + G
Sbjct: 596 DFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGA 655
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+K P +T L+K + D+G P
Sbjct: 656 LKQ-------------------PDRKTFFDLLK----------------DMHDQGLRPDN 680
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR- 481
++ G +++AFEC M V+E + + Y N K ++DR
Sbjct: 681 VIYTSMIDTYSKEGSFKKAFECWDLM------VTEECFPNVVTYTALMNGLCKAGEMDRA 734
Query: 482 --MIKNLQAVLPPPT 494
+ K +QA PP
Sbjct: 735 GLLFKRMQAANVPPN 749
>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 618
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 152/324 (46%), Gaps = 5/324 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI++ + K + ++ L F+ ME + GI K ++ ++ C + +
Sbjct: 248 SIVIDSLCKDGNLDDALSLFNEMEMK---GI-KADVVAYSSIIGGLCNDGRWDDGAKMLR 303
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ R PN T + L+ F + G + + Y+EMV RG P +TY+ IDG+CK+
Sbjct: 304 EMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKEN 363
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
G+A ++ + M C P++ T + LI+ + + +LF E+ + L D YN
Sbjct: 364 RLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYN 423
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + LN A EL EM + + VTY + GL + L+ +++++M +
Sbjct: 424 TLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKS 483
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ + +++ C +VD +L+ L +G P ++++ GLC +G EA
Sbjct: 484 RMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEA 543
Query: 442 FECSKQMLVRRRQVSEASYRMLQR 465
++M S+ +Y +L R
Sbjct: 544 DMLFRKMKEDGCAPSDCTYNILIR 567
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 160/352 (45%), Gaps = 6/352 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
++A +L + ++ P L +L S + S +++ + Y+ L M+ GI +
Sbjct: 51 NEAIDLFESMIQSRP-LPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLN---GI-EHNMY 105
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
N+++ FC ++++ A SV + L F PN T + L+ GF G V+ M
Sbjct: 106 TMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRM 165
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V +RP+VVT N I+G C KG +A+ L + M + C + T +++ N
Sbjct: 166 VEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNT 225
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A LF +M +R++K + Y+ +I SL + +L+ A+ L +EME K I D V Y ++
Sbjct: 226 ALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSI 285
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL + K+ MI +P T L+ F ++ L+ ++ RG
Sbjct: 286 IGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVARGI 345
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
P L+ G C R EA + M+ + + + +Y +L +A
Sbjct: 346 APDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 105/215 (48%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+++L+ ++C K + +F ++ S+ + T N L+ GF +SG + + + EMV
Sbjct: 387 YSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMV 446
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG PSVVTY I +DG C G A+ +FE+M++ + + +IHG +
Sbjct: 447 SRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVD 506
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF + + +KPD+ YN MI L + L+ A L +M+E + TY+ +
Sbjct: 507 DAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILI 566
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ SG+ +L + M F T+ M++
Sbjct: 567 RAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 109/444 (24%), Positives = 185/444 (41%), Gaps = 55/444 (12%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A++ F+ +Q P+ F K +AR + +D + + +M+I
Sbjct: 52 EAIDLFESMIQSRPL-PSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEH-NMYTMNI 109
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
M I+ F + L AF + R + KFG E F+ L+ FC + + EA ++
Sbjct: 110 M---INCFCRKRKLLFAFSVVGRAL-----KFGFEPNTITFSTLINGFCLEGRVSEAVAL 161
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++ ++ PN T+N L+ G G VT + MV G + +TY ++ CK
Sbjct: 162 VDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCK 221
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A+ LF +ME + S+ + +I N+ A LF+EM + +K D+ A
Sbjct: 222 SGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVA 281
Query: 320 YNAMISSLIRCRD-------------------------------------LNAAMELMDE 342
Y+++I L C D L A EL +E
Sbjct: 282 YSSIIGGL--CNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M + I D +TY ++ G K + L ++ D M+ P T +L+ +C R
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD G+ L+ + +G + LV G C G+ A E ++M+ R S +Y +
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459
Query: 463 LQRYLVQANANEK-LEDLDRMIKN 485
L L +K LE ++M K+
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKS 483
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+++A LF+ M + P + ++ + S++ R ++ + + EM+ I H+ T +
Sbjct: 50 VNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMNI 109
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M + L + R ++ F P T T L+ FC+ RV + L +++
Sbjct: 110 MINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEMK 169
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ P+ ++ L+ GLC +GR EA +M+ + +E +Y
Sbjct: 170 YRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITY 212
>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 592
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 171/377 (45%), Gaps = 12/377 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELM-SHVQRT-HPSLLTLKSMSIMLSRISKFQSYE 156
F P + +H L ++ A L+ S VQ+ P+++T ++ + + K +
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTI---IDCLFKDRQVN 231
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
E L F M I GI S +N ++ C E K ++ +++ S+ PN
Sbjct: 232 EALNIFSEM---IAKGISPNVST-YNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIF 287
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ + G VT M+ RG P VVTY +DG+C + +A ++F+ M R
Sbjct: 288 TTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVR 347
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P++ + +TLI+G ++ I +A LF+EM +R L P+I YN +I L L
Sbjct: 348 KGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRD 407
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLM 394
A+ L EM D VTY + L K+ L+ + + IEG P ++ +++
Sbjct: 408 AIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAML-KAIEGSNLAPDIQSYNIVI 466
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ +L+ L +G P +++ GLC +G EA + ++M
Sbjct: 467 DGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCS 526
Query: 455 VSEASYRMLQRYLVQAN 471
+ +Y ++ R ++ N
Sbjct: 527 PDDCTYNLITRGFLRNN 543
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 89/381 (23%), Positives = 159/381 (41%), Gaps = 46/381 (12%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L+ I+ + Y L +M+ +GI +++ +FC + SV K+
Sbjct: 80 ILTSIANMKHYSTVLSLSKQMDS---LGIPS-DVYTLAIVINSFCHLNRVDFGFSVLAKI 135
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
P+ T L+ G G + + +MV GF+P+ VTY I G CK G
Sbjct: 136 FKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNS 195
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+RL M + C P++ T T+I R +++A +F EM + + P++ YN++
Sbjct: 196 RAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSI 255
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK------------------- 364
I L + + LM+EM + +I + V + T+ L K
Sbjct: 256 IHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGV 315
Query: 365 -------SSGLEGVC---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
++ ++G C K++D M+ P + L+ +C R+D +
Sbjct: 316 EPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMY 375
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
L+ + R P+ + L+ GLC GR +A +M+ + +YR+L YL
Sbjct: 376 LFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLC 435
Query: 469 QANANEKLEDLDRMIKNLQAV 489
K LD+ + L+A+
Sbjct: 436 ------KTRHLDQAMAMLKAI 450
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/300 (23%), Positives = 129/300 (43%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ A C + + A V ++ R P+ T L+ G ++ + + MV
Sbjct: 287 FTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMV 346
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+V++Y+ I+GYCK AM LFEEM + +P++ T TLIHG V +
Sbjct: 347 RKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLR 406
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF EM PD+ Y ++ L + R L+ AM ++ +E + D +Y+ +
Sbjct: 407 DAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVI 466
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + LE L+ + P T +++ C+ + L+ + G
Sbjct: 467 DGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCS 526
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +L+ G A + ++ML R ++ ++ L ++ ++ +
Sbjct: 527 PDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQSVKQI 586
>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
[Arabidopsis thaliana]
Length = 602
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 148/324 (45%), Gaps = 5/324 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + + + + F ME + GI K +N L++ C + + +
Sbjct: 232 STIIDSLCRDGCIDAAISLFKEMETK---GI-KSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++SR PN T N+LL F + G + Y EM+ RG P+++TYN +DGYC +
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A + + M R C P + T T+LI G +V+ + ++F + KR L + Y+
Sbjct: 348 RLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYS 407
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + + A EL EM + D +TY + GL + LE ++++ + +
Sbjct: 408 ILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKS 467
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
K +++ C +V+ NL+ L +G P+ ++++GLC +G EA
Sbjct: 468 KMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEA 527
Query: 442 FECSKQMLVRRRQVSEASYRMLQR 465
++M ++ +Y L R
Sbjct: 528 NILLRKMEEDGNAPNDCTYNTLIR 551
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 143/320 (44%), Gaps = 8/320 (2%)
Query: 173 IRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGD 227
+ K G E FN L+ C + ++ +A + +++ P+ T N ++ G SGD
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ +M R + V TY+ ID C+ GC A+ LF+EME S+ T +
Sbjct: 209 TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L+ G + L +M R + P++ +N ++ ++ L A EL EM +
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I + +TY+T+ G + L + D M+ K P T L+K +C+ RVD G+
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGM 388
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ + RG + +LV G C G+ + A E ++M+ +Y +L L
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 468 VQANANEKLEDLDRMIKNLQ 487
N KLE + ++LQ
Sbjct: 449 CD---NGKLEKALEIFEDLQ 465
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 104/215 (48%), Gaps = 1/215 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L++ +C K + + VF + R N T +IL+ GF +SG + E + EMV
Sbjct: 371 FTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMV 430
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TY I +DG C G A+ +FE++++ + TT+I G +
Sbjct: 431 SHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVE 490
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +P + +KP++ Y MIS L + L+ A L+ +MEE ++ TY+T+
Sbjct: 491 DAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLI 550
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
++ L KL + M F ++ M++
Sbjct: 551 RAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVI 585
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 122/264 (46%), Gaps = 12/264 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++FN++L FC Q E L+ A N T+NI++ F +
Sbjct: 101 TKQFNLVLD-FCKQLE-----------LNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGK 148
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
++ G+ P T+N I+G C +G A+ L + M C P + T ++++G +
Sbjct: 149 VMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGD 208
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A + +M +RN+K D+ Y+ +I SL R ++AA+ L EME K I VTY++
Sbjct: 209 TSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNS 268
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ L M+ + VP T +L+ F ++ L+ +I RG
Sbjct: 269 LVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRG 328
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
P+ + L+ G C + R EA
Sbjct: 329 ISPNIITYNTLMDGYCMQNRLSEA 352
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 120/255 (47%), Gaps = 5/255 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
F ++ L G ++ T NI I+ +C+ K CF A + ++ ++ P T TLI+G
Sbjct: 110 FCKQLELNGIAHNIYTLNIMINCFCRCCKTCF--AYSVLGKVMKLGYEPDTTTFNTLING 167
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L + +A L D M + +PD+ YN++++ + R D + A +++ +MEE+ + D
Sbjct: 168 LCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKAD 227
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY T+ L + ++ L+ M T L++ C + + G L
Sbjct: 228 VFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLK 287
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQA 470
++ R P+ ++L+ G+ +EA E K+M+ R + +Y ++ Y +Q
Sbjct: 288 DMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQN 347
Query: 471 NANEKLEDLDRMIKN 485
+E LD M++N
Sbjct: 348 RLSEANNMLDLMVRN 362
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 85/201 (42%), Gaps = 40/201 (19%)
Query: 168 EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
++F I K G + +++L+Q FC ++K A +F +++S P+ T ILL G
Sbjct: 389 KVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGL 448
Query: 223 KESGDV-TAMEMF----------------------------------YHEMVLRGFRPSV 247
++G + A+E+F + + +G +P+V
Sbjct: 449 CDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNV 508
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+TY + I G CKKG +A L +ME P+ T TLI ++ + +L +E
Sbjct: 509 MTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE 568
Query: 308 MPKRNLKPDIGAYNAMISSLI 328
M D + +I L+
Sbjct: 569 MKSCGFSADASSIKMVIDMLL 589
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 79/206 (38%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF+EM R LP L + + + ++ + +I N MI
Sbjct: 71 DAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMI 130
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RC A ++ ++ + D T++T+ GL + L DRM+E
Sbjct: 131 NCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQ 190
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ C + L ++ + +R ++ LC G + A
Sbjct: 191 PDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISL 250
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M + + S +Y L R L +A
Sbjct: 251 FKEMETKGIKSSVVTYNSLVRGLCKA 276
>gi|255660830|gb|ACU25584.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 418
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 99/380 (26%), Positives = 161/380 (42%), Gaps = 79/380 (20%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H + P D K L L +++YF W
Sbjct: 85 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE LE ++ FN+L+ FC +++ A+SVF +
Sbjct: 124 ---------YEEILEC--GYPASLYF---------FNILMHKFCKDGDIRVAQSVF-NAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ GD+ M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L R DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCRKGDLKQARDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQE-- 340
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
N ++D D G+ L++GLC GR+ +A +
Sbjct: 341 ----------------NIQLD----------DVGYTA-------LISGLCQEGRYLDAEK 367
Query: 444 CSKQMLVRRRQVSEASYRML 463
++ML + +Y M+
Sbjct: 368 VLREMLSVGLKPDTITYTMI 387
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 123/262 (46%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F + + PS+ + TL++G
Sbjct: 123 FYEEILECGYPASLYFFNILMHKFCKDGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM +K + + V
Sbjct: 183 RLGDLDEGFRLKTAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCRKGDLKQARDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ Q+ + Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEHRKRMIQENIQLDDVGYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D +++++ + +V L P T
Sbjct: 361 -RYLDAEKVLREMLSVGLKPDT 381
>gi|222637660|gb|EEE67792.1| hypothetical protein OsJ_25528 [Oryza sativa Japonica Group]
Length = 475
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 88/329 (26%), Positives = 150/329 (45%), Gaps = 9/329 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + + F+ M+ + G F ++ ++ A+C ++ A
Sbjct: 136 TVGTYTILVDGLSAARDITKVEAVFEEMKSKNLSGDVYF----YSSVINAYCRAGNVRRA 191
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
VF + + PN T L+ GF + G + A EM +M +RG + + +N IDG
Sbjct: 192 SEVFDECVGNGIEPNEHTYGALINGFCKIGQMEAAEMLVTDMQVRGVGINQIVFNTMIDG 251
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+K A+ + ME++ + T TL G + +A+ L M ++ ++P+
Sbjct: 252 YCRKNMVDKALEIKMIMEKMGIELDVYTYNTLACGLRRANRMDEAKNLLRIMIEKGVRPN 311
Query: 317 IGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
+Y +IS I C D+ A L EM VTY+ M G +K + +
Sbjct: 312 HVSYTTLIS--IHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERF 369
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M + VP + L+ CVN +VD+ L L+ + RG P+ A L++GL
Sbjct: 370 KNEMEKKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAK 429
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
GR EEAF+ ML +A Y L
Sbjct: 430 EGRSEEAFQLYDNMLGDGLTPDDALYSAL 458
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 1/148 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +M EAR +F ++ A P+ T N+++ G+ + G + E F +EM
Sbjct: 315 YTTLISIHCNEGDMVEARRLFREMAGNGAEPSLVTYNVMMDGYIKKGSIREAERFKNEME 374
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P + +Y + G+C G A+RLFEEM++ P+L T LI G
Sbjct: 375 KKGLVPDIYSYAALVHGHCVNGKVDVALRLFEEMKQRGSKPNLVAYTALISGLAKEGRSE 434
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSL 327
+A QL+D M L PD Y+A++ SL
Sbjct: 435 EAFQLYDNMLGDGLTPDDALYSALVGSL 462
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/326 (23%), Positives = 137/326 (42%), Gaps = 7/326 (2%)
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ D A +L+ + P +T S S+++ K + D M R G+ K
Sbjct: 46 HLDTAADLLKQAATSCPDSVTPLSASVVVDGYCKSGRVAHARQLLDEMPRH---GV-KVN 101
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ +N LL A+ +K+ + + +K++ P T IL+ G + D+T +E +
Sbjct: 102 ALCYNSLLDAYTREKD-DDRVAEMLKVMENEGIEPTVGTYTILVDGLSAARDITKVEAVF 160
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM + V Y+ I+ YC+ G A +F+E P+ T LI+G +
Sbjct: 161 EEMKSKNLSGDVYFYSSVINAYCRAGNVRRASEVFDECVGNGIEPNEHTYGALINGFCKI 220
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A L +M R + + +N MI R ++ A+E+ ME+ I D TY
Sbjct: 221 GQMEAAEMLVTDMQVRGVGINQIVFNTMIDGYCRKNMVDKALEIKMIMEKMGIELDVYTY 280
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ GL +++ ++ L MIE P + L+ C + L+ +
Sbjct: 281 NTLACGLRRANRMDEAKNLLRIMIEKGVRPNHVSYTTLISIHCNEGDMVEARRLFREMAG 340
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
G P ++++ G +G EA
Sbjct: 341 NGAEPSLVTYNVMMDGYIKKGSIREA 366
>gi|125540181|gb|EAY86576.1| hypothetical protein OsI_07956 [Oryza sativa Indica Group]
gi|125582780|gb|EAZ23711.1| hypothetical protein OsJ_07414 [Oryza sativa Japonica Group]
gi|215768726|dbj|BAH00955.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 500
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
LF + AL FF++ + T A + + +L +MR DQ WEL+S +
Sbjct: 89 LFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMH--GRG 146
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
L+T+++++ + R++ + +++ + FD++E +G+ + +E NVLL C +++++
Sbjct: 147 LVTVETVAKSIRRLAGARRWKDVVLLFDKLED---MGLER-NTETMNVLLDVLCKERKIE 202
Query: 196 EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR VF L P+ T NI + G+ + EM RGF PSV+TY ++
Sbjct: 203 VAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLE 262
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
YCK+ F + + M C P++ T T ++ +A + M KP
Sbjct: 263 AYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKP 322
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
D YN++I+ L + L A ++ EM + H+ TY+TM
Sbjct: 323 DTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMI 367
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 31/273 (11%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRI 149
F + PH P F +H +R D+A + ++R PS++T
Sbjct: 208 FAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVIT----------- 256
Query: 150 SKFQSYEETLEAF--DRMEREIFVGIRKFGSE-------EFNVLLQAFCTQKEMKEARSV 200
Y LEA+ R R ++ + GS+ + +++ + + +EA SV
Sbjct: 257 -----YTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSV 311
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ S P+ N L+ +SG + A ++F EM + G ++ TYN I +C
Sbjct: 312 SHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFC 371
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-IHQARQLFDEM-PKRNLKPD 316
G DA+ + +EME +C P +Q+ L+ R R L E+ K NL D
Sbjct: 372 YYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLD 431
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ Y +I L R D A +L DEM I
Sbjct: 432 LDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIA 464
>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 588
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 42/343 (12%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+++ + C + A S K+L P+ T L+ G G + + +M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF+P+VVTY I+G CK G A+RL ME+ C P++ +TLI R + +A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F EM + + P+I YN++I L + + LM+EM + +I D T +T+
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR----- 416
L K + + D MI P T LM C+ VD+ + ++ ++ +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349
Query: 417 ---------GFC---------------------PHGHALDLLVTGLCSRGRWEEAFECSK 446
G+C P+ + L+ GLC GR ++A
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
+M+ R + +YR L YL K LD+ + L+A+
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLC------KNRHLDKAMALLKAI 446
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+ EAF+ I GI +N L+ C E K ++ +++ S+ P+ T+
Sbjct: 225 QVTEAFNIFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ + G V M+ RG P+VVTYN +DG+C + A+++F+ M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C+ ++ + TLI+G ++++ +A LF+EM ++ L P+ YN +I L L
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLM 394
A+ L EM + D VTY T+ L K+ L+ L + IEG + P + ++
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTIL 462
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ +L+ L +G P+ ++++ GLC +G EA + +M
Sbjct: 463 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 522
Query: 455 VSEASYRMLQRYLVQAN-ANEKLEDLDRMI 483
++ +Y ++ R ++ N A +E L+ M+
Sbjct: 523 PNDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 157/376 (41%), Gaps = 14/376 (3%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P F + L + R +A+ + S + + P+++T S+ L ++
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259
Query: 151 KFQSYEETL-EAFD-RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+++ + E D ++ ++F N ++ A C + + EA V ++ R
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFT---------LNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T N L+ G +V + MV + +V++YN I+GYCK AM
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
LFEEM R P+ T TLIHG V + A LF EM R PD+ Y + L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ R L+ AM L+ +E D Y T+ G+ ++ LE L+ + P
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +++ C + L+ + G P+ +L+ G E ++
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550
Query: 448 MLVRRRQVSEASYRML 463
ML R V ++ +L
Sbjct: 551 MLARGFSVDVSTTTLL 566
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 1/271 (0%)
Query: 194 MKEARSVFVKLLSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA S F ++L + P + N LL ++ + + +M G P V T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+ C A ++ ++ P T TTLI G + I +A LFD+M
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+P++ Y +I+ L + + +AA+ L+ ME+ + V + T+ L K +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++ MI P T L+ C L ++D P L+ +V L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C G EA + M+ R + + +Y L
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321
>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 579
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 13/322 (4%)
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD-VTAMEM 233
K + +L+ C +M E R+ L + + M ++ G VT
Sbjct: 112 KLDQVSYAILMNGLC---KMGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYR 168
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
Y EM+ +G P+V T++I +D CK AM L M + P++ T ++ G
Sbjct: 169 LYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYC 228
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
LV +++A +F+ M + ++P++ YN +I+ L + + ++ AM L EM K+I D V
Sbjct: 229 LVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVV 288
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM---LMKFFCVNFRVDLGLNLW 410
TY+ + GL K + +L D M + + KT ++ L+ C N +D + L
Sbjct: 289 TYNILIDGLCKLGKISTSLELVDEM---RSIGKTVDIITYNSLLHALCKNHHLDQAITLV 345
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ D+G P+ L+ GLC GR E+A+ +++L ++ +Y ++ L +
Sbjct: 346 KEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKK 405
Query: 471 NA-NEKLEDLDRMIKNLQAVLP 491
+E L L RM N A +P
Sbjct: 406 GLFDEALALLSRMEDN--ACIP 425
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++L+ A C ++ K+A ++ ++ + PN T ++ G+ V ++ MV
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V YNI I+G CKK +AM LF+EM P + T LI G + I
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +L DEM DI YN+++ +L + L+ A+ L+ E++++ I + TY T+
Sbjct: 305 TSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLI 364
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K LE ++ ++ + T +++ C D L L + D
Sbjct: 365 DGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACI 424
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P + + ++ L +G + + M+VR
Sbjct: 425 PDAVSYETIIYALSEKGETVKTNKLLCAMIVR 456
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 154/348 (44%), Gaps = 9/348 (2%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L+ + K Y + F ++E F GI+ +L+ +C + S+ K+
Sbjct: 16 ILASLVKINHYPTAISLFRQLE---FNGIKP-SIVTLTILMNCYCHTGGITFLFSILTKI 71
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L + PN+ T L+ G +G +F+ +V GF+ V+Y I ++G CK G
Sbjct: 72 LKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGET 131
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
AM++ + A + +T+I + + A +L+ EM + + P++ ++ +
Sbjct: 132 RAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSIL 188
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ +L + R AM L+ M +K + + VTY + G + + +++ M++
Sbjct: 189 VDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGV 248
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P +++ C RVD +NL+ + + P ++L+ GLC G+ + E
Sbjct: 249 EPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLE 308
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+M + V +Y L L + + ++ L + IK+ Q + P
Sbjct: 309 LVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKD-QGIQP 355
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/309 (19%), Positives = 111/309 (35%), Gaps = 74/309 (23%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI------------------- 285
P ++ +N + K + A+ LF ++E PS+ T+
Sbjct: 8 PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67
Query: 286 ----------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
TTLI G L ++A D + K D +Y +++ L +
Sbjct: 68 LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ AAM++ + + + D V Y T+ L K + +LY MI P T
Sbjct: 128 MGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184
Query: 390 VVML-----------------------------------MKFFCVNFRVDLGLNLWGYLI 414
+L M +C+ +V+ LN++ ++
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANAN 473
G P+ ++++ GLC + R +EA K+M ++ +Y +L L + +
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304
Query: 474 EKLEDLDRM 482
LE +D M
Sbjct: 305 TSLELVDEM 313
>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Glycine max]
Length = 570
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 168/394 (42%), Gaps = 15/394 (3%)
Query: 97 PHFTPTPD-----AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM--LSRI 149
P F P P+ + +TL IL ++ +S V + L K ++ LSR
Sbjct: 11 PLFNPHPNRTNSHSNSRTLPILNETTNINRT---LSSVSKPQTHTLDFKDTHLLKSLSRS 67
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
K ++ E+L R + K L+ T K + +A V L +
Sbjct: 68 CKAGNFNESLYFL----RHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHGH 123
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+ N ++ GF + + + M +GF P +VTYNI I C +G A+
Sbjct: 124 PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEF 183
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
++ + C P++ T T LI L I +A +L DEM + NL+PD+ YN++I + R
Sbjct: 184 KNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCR 243
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A +++ + K D +TY+ + GL+ E +L M+ T
Sbjct: 244 EGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVT 303
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+L+ C + +V+ G+ L + +G P G+ D L+ LC GR + A E M+
Sbjct: 304 YSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMI 363
Query: 450 VRRRQVSEASYRMLQRYLV-QANANEKLEDLDRM 482
+Y + L Q A+E L +++
Sbjct: 364 SDGCVPDIVNYNTILACLCKQKRADEALSIFEKL 397
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/364 (22%), Positives = 157/364 (43%), Gaps = 16/364 (4%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
KA++ H H P A+ + R D A++++ ++ P ++T
Sbjct: 110 KAIQVMHILENHGH--PDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVT---Y 164
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+I++ + + LE +++ +E K + +L++A Q + EA +
Sbjct: 165 NILIGSLCSRGMLDSALEFKNQLLKENC----KPTVVTYTILIEATLLQGGIDEAMKLLD 220
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L P+ T N ++ G G V + +G+ P V+TYNI + G +G
Sbjct: 221 EMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQG 280
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+ L +M C ++ T + LI + + L +M K+ LKPD Y+
Sbjct: 281 KWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYD 340
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I++L + ++ A+E++D M D V Y+T+ L K + +++++ E
Sbjct: 341 PLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEV 400
Query: 382 KFVPKTRTV-VMLMKFFCVNFRV-DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P + M + +V LG+ L ++D+G P G + L++ LC G +
Sbjct: 401 GCSPNASSYNSMFSALWSTGHKVRALGMILE--MLDKGVDPDGITYNSLISCLCRDGMVD 458
Query: 440 EAFE 443
EA E
Sbjct: 459 EAIE 462
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/472 (20%), Positives = 191/472 (40%), Gaps = 33/472 (6%)
Query: 23 LFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSN 82
LF++ T I+ + I+ +H PD + ++ + + S VL R+
Sbjct: 102 LFTSKTIDKAIQ-VMHILENHGHPDLIAYNAIITGFCRANRIDSAY--QVLDRM------ 152
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLK 140
++ F+P + + L D A E + + + P+++T
Sbjct: 153 ------------KNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVT-- 198
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+I++ +E ++ D M EI + F +N +++ C + + A +
Sbjct: 199 -YTILIEATLLQGGIDEAMKLLDEM-LEINLQPDMF---TYNSIIRGMCREGYVDRAFQI 253
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ S+ +AP+ T NILL G G A +MV RG +VVTY++ I C+
Sbjct: 254 ISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCR 313
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G + + L ++M++ P LI + A ++ D M PDI
Sbjct: 314 DGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVN 373
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +++ L + + + A+ + +++ E + +Y++MF L + + M+
Sbjct: 374 YNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEML 433
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL-IDRGFC-PHGHALDLLVTGLCSRGR 437
+ P T L+ C + VD + L + ++ C P + ++++ GLC R
Sbjct: 434 DKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSR 493
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
+A E M+ + + +E +Y L + DL + N+ A+
Sbjct: 494 VSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAI 545
>gi|357159762|ref|XP_003578551.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20300,
mitochondrial-like [Brachypodium distachyon]
Length = 534
Score = 117 bits (293), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 115/455 (25%), Positives = 199/455 (43%), Gaps = 26/455 (5%)
Query: 44 PFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL---KALEFFKFTLQHPHFT 100
PF P T L L +TP S L +V GRL A G+ +AL FF L
Sbjct: 74 PFDPLPSLSTTLTGLLPSTP-SPHLTFHVFGRLLALR-RGIPFPEALAFFNHVLPSLPTD 131
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ + + +LA+ +F A L+ +++ + S ++L+ I ++ + E
Sbjct: 132 SLPELYASMMDLLAKHHHFPLARHLLDEMRKRSIPI----SSQVILALIRRYVRAGMSSE 187
Query: 161 AFDRMEREIFVGIRKFGS-----EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
A D +F + ++G LL A ++ EA+++F S F P+
Sbjct: 188 ASD-----LFRSMEEYGGGVPDPAVLASLLGALSKKRLASEAQALFDSYKSVFTPDVVLY 242
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ + SG + E + EM G P+V TY ID + G A L +M
Sbjct: 243 TTLVHAWCRSGCLDKAEQVFAEMQQAGIMPNVYTYTAVIDAMYRAGQVPRAQELLCQMID 302
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC----R 331
C P+ T ++ Q Q+ ++M + PDI YN ++ + C
Sbjct: 303 SGCPPNTATFNAIMRAHVKAGRSEQVLQVHNQMRQLGCDPDIITYNFLMET--HCGKGQS 360
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+L+AAM+L+ +M K D T++ M ++ ++ KLY+RM E + P T
Sbjct: 361 NLDAAMKLLLKMIAKGCTPDCHTFNPMLKLVVVLGNVDAAHKLYERMQELQCKPNVITYN 420
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML-V 450
+LMK F + +D+ L + + +G P+ + L+ C RG W+ A+ ++ML V
Sbjct: 421 LLMKLFGKDKSMDMVLRIKKDMDAQGVEPNVNTYGALIETFCGRGNWKRAYATLREMLEV 480
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+ + + Y M+ L +A K E+L ++ +
Sbjct: 481 KSLKPKKPVYDMVLVLLRKAGQLRKHEELVELMAD 515
>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 770
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 169/371 (45%), Gaps = 27/371 (7%)
Query: 85 KALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
++L F TLQ +P+ P+ + + L + +++D HV H + ++
Sbjct: 40 ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYD-------HVISVHSKMASV---- 88
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFV-GI------RKF--GSEEFNVLLQAFCTQKEM 194
S F S +E+F ++ F G+ R F FN+LL+ FC +
Sbjct: 89 ---SVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDS 145
Query: 195 KEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+A +F ++ R P+ + N ++ G + + + + EM +P+ VT++
Sbjct: 146 HKAMDLFC-MMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSA 204
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
IDG+CK G + L EEME++ + + LI G +I + ++LF+EM ++N
Sbjct: 205 LIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKN 264
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ P++ Y+ ++++L + + A +++D M ++ D V Y + GL K+
Sbjct: 265 VTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAI 324
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
K+ D M++ P T ++ C RVD L + + +G P LV GL
Sbjct: 325 KVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGL 384
Query: 433 CSRGRWEEAFE 443
C G+ +EA +
Sbjct: 385 CGVGKIDEAVD 395
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 92/363 (25%), Positives = 159/363 (43%), Gaps = 13/363 (3%)
Query: 124 ELMSHVQRT---HP-SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS- 178
E +SH T +P S+ + S + ++ + K + Y+ + +M + F
Sbjct: 40 ESLSHFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKM-----ASVSVFPCF 94
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYH 236
+ L+++F ++ A V ++ R F N N+LL GF +SGD AM++F
Sbjct: 95 TSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCM 154
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
M P V+YN I+G CK +A LF+EM+ C P+ T + LI G
Sbjct: 155 -MKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNG 213
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ + L +EM K L+ D+ Y+A+IS D+ EL +EM K + + VTY
Sbjct: 214 DVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYS 273
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ L K + ++ D M K P +L N R + + ++ R
Sbjct: 274 CLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKR 333
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P+ + ++ GLC GR ++A + M + ++ +Y L + L ++
Sbjct: 334 GEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEA 393
Query: 477 EDL 479
DL
Sbjct: 394 VDL 396
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 151/340 (44%), Gaps = 8/340 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P + ++ L + D A ++ + + P ++T ++ L + K +
Sbjct: 337 PNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDL 396
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNI 217
L M +E + F FN+++Q C Q+ ++ A+ V+ ++ R P+N T NI
Sbjct: 397 LNLL--MSKEFHIKPDVFA---FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNI 451
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ +G +T + + V G P+ TY + I+G CK A LF +
Sbjct: 452 LIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASG 511
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ TL+ ++ QAR LF EM N PD+ ++N +I ++ D+ +A
Sbjct: 512 TRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAK 571
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL+ EM + DN+T+ + +K L+ LY+RM+ VP L+K +
Sbjct: 572 ELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGY 631
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+ + + +++ + D+ ++ LC+ +
Sbjct: 632 SLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSK 671
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 168/407 (41%), Gaps = 40/407 (9%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L + F + KA++ F ++ P ++ ++ L + + +A EL ++
Sbjct: 133 NLLLKGFCQSGDSHKAMDLF-CMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMK 191
Query: 131 --RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIFV-----------G 172
P+ +T S ++ K EE + ME+ ++FV G
Sbjct: 192 GGECKPNSVTF---SALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKG 248
Query: 173 IRKFGSEEFN---------------VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMN 216
+ G E FN L+ A C +++ KEA + + + P+
Sbjct: 249 DIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYT 308
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L G ++G + MV RG P+ VTYN I+G CK+G DA+ + E M +
Sbjct: 309 VLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKK 368
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAYNAMISSLIRCRDLN 334
P + T +TL+ G V I +A L + + + ++KPD+ A+N +I L + R L
Sbjct: 369 GKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLR 428
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A + M E+ + VTY+ + G + + L +L+ ++ P T +L+
Sbjct: 429 HAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLI 488
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C + + L+ G P + L+ LC E+A
Sbjct: 489 NGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQA 535
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 127/271 (46%), Gaps = 3/271 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
++ L++ C ++ EA + L+S+ P+ N+++ + + + Y+
Sbjct: 377 YSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYT 436
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV RGF ++VTYNI IDGY G A+ L+++ P+ T T LI+G ++
Sbjct: 437 MVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQM 496
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A+ LF++ +P + YN +++SL R + A L EM D V+++
Sbjct: 497 LSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNI 556
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G +K+ +E +L M+ VP T +L+ F ++D +L+ ++ G
Sbjct: 557 IIDGTLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCG 616
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P D L+ G +G+ E+ +QM
Sbjct: 617 HVPDAVLFDSLLKGYSLKGKTEKVVSMLQQM 647
>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
Length = 528
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 138/332 (41%), Gaps = 33/332 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ + +++A V +++S R P+N T+ +++ V EM+
Sbjct: 42 YTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEML 101
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG + +TY+ +DG CK +A+ L E M C P++ T ++I G R +
Sbjct: 102 HRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVD 161
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++M PDI Y A+I + RD+ +EL+ E+ + D VTY T+
Sbjct: 162 EAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVI 221
Query: 360 FGLMKSSGLE-----------------------GVCKLYD---------RMIEGKFVPKT 387
GL K+ L G C+ D +M++ K P
Sbjct: 222 DGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDV 281
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T LM FC R+D L+ ++ P LV GLC GR E+A E ++
Sbjct: 282 VTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEE 341
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ R + +Y + +AN K E+L
Sbjct: 342 ITRRGCPPTIYTYNCVVDGYCKANQVRKAEEL 373
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/464 (20%), Positives = 179/464 (38%), Gaps = 51/464 (10%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSST--LVENVLGRLFAAHS-------NG 83
++ + +++ PD ++Q L + LVE +L R AA++ +G
Sbjct: 59 VQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDG 118
Query: 84 LKALEFFKF------TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPS 135
L E T+ PT + + R R D+A M + + HP
Sbjct: 119 LCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPD 178
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV-----------GIRKFGS------ 178
++T ++ + K + LE + R F G+ K G
Sbjct: 179 IITYTAL---IGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD 235
Query: 179 --EE---------FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESG 226
EE +N L+ +C +M EA + K++ + AP+ T L+ F + G
Sbjct: 236 IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMG 295
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
+ + +MV P VVT+ +DG C +G DA+ L EE+ R C P++ T
Sbjct: 296 RLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYN 355
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM--E 344
++ G + +A +L + R P+ YN +++ R + A++ +D++ E
Sbjct: 356 CVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSE 415
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
Y + L + + + Y+ MI+ +VP T ++ C +
Sbjct: 416 GGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQ 475
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L +I G P D +V+ C G ++A E + ++
Sbjct: 476 QAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/435 (22%), Positives = 185/435 (42%), Gaps = 23/435 (5%)
Query: 56 QHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILAR 115
+H+P T L+ + LG A E + L H + + L +
Sbjct: 69 RHVPDNTTLTVVVQSLCLGDRVD------DARELVEEML-HRGMAANAITYSALVDGLCK 121
Query: 116 MRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
D+A L+ + P+++T S+ I+ F EA ME+ + G
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSI------ITGFCRARRVDEAHGFMEQMVAEGC 175
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAME 232
+ L+ FC +++ + ++ R F P+ T + ++ G ++G +
Sbjct: 176 HP-DIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAV 234
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ EM P+ +TYN I GYC+ G +A+RL +M C P + T TTL+
Sbjct: 235 DIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAF 291
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ + A +LF +M L PD+ + +++ L + A+EL++E+ +
Sbjct: 292 CKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTI 351
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY+ + G K++ + +L FVP T T +L+ C R D L
Sbjct: 352 YTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQ 411
Query: 413 LIDRGF-CPHGHAL-DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
L G CP A+ +++ LC GR ++A + ++M+ R + A++ + L +A
Sbjct: 412 LNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKA 471
Query: 471 NANEKLED-LDRMIK 484
+ ++ + L+ MIK
Sbjct: 472 HQPQQAHELLEEMIK 486
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 124/276 (44%), Gaps = 3/276 (1%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P N+++ G +G + Y +M P +TY + G K DA+++
Sbjct: 3 PGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAVQV 61
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+EM +P T+T ++ L + AR+L +EM R + + Y+A++ L +
Sbjct: 62 LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCK 121
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
C L+ A+ L++ M E+ VTY+++ G ++ ++ ++M+ P T
Sbjct: 122 CERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIIT 181
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ FC + V GL L G + RGF P ++ GLC GR +A + ++M
Sbjct: 182 YTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS 241
Query: 450 VRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
++ S ++ Y + +E + L +M+ +
Sbjct: 242 CAPTAITYNS--LIGGYCRAGDMDEAIRLLGKMVDD 275
>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Vitis vinifera]
Length = 644
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 53/439 (12%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL----MSHVQRTHPSLLTLK 140
KA+E F + T +F L+++ + F +A E + P++L
Sbjct: 117 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL--- 173
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN--VLLQAFCTQKEMKEAR 198
S ++++ + K + +E F M I+K + F L+ C + + EA
Sbjct: 174 SFNLVIKAMCKLGLVDRAIEVFREM------AIQKCEPDVFTYCTLMDGLCKEDRIDEAV 227
Query: 199 SVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ ++ + P++ T N+L+ G + GD+ + M L+G P+ VTYN I+G
Sbjct: 228 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 287
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------------- 291
C KG A+ L + M C+P+ T TLI+G
Sbjct: 288 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 347
Query: 292 -------AGLVR--NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+GL + +A L+ +M ++ +P+I Y+A+I L R L+ A E++ E
Sbjct: 348 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 407
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M K + TY ++ G K+ + +++ M + VP +L+ C + +
Sbjct: 408 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 467
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASY 460
+ + +W +++ RG P A ++ GLC+ G E + +ML + Q +Y
Sbjct: 468 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 527
Query: 461 RMLQRYLVQANANEKLEDL 479
+L R L + N+ DL
Sbjct: 528 NILLRALCKQNSISHAIDL 546
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 143/314 (45%), Gaps = 18/314 (5%)
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN------N 212
+ FDRM+RE V I K F ++ +A+ ++A +F +++ F N
Sbjct: 84 FQVFDRMKRERRVFIEK----NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFN 139
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRG---FRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+N+++ +E A+E ++E + G P+V+++N+ I CK G A+ +
Sbjct: 140 SVLNVII---QEGLFHRALE--FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 194
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F EM C P + T TL+ G I +A L DEM P +N +I+ L +
Sbjct: 195 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 254
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
D+ +L+D M K + VTY+T+ GL L+ L DRM+ K VP T
Sbjct: 255 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 314
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ R G++L L +RG + +A L++GL + EEA K+M+
Sbjct: 315 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 374
Query: 450 VRRRQVSEASYRML 463
+ Q + Y L
Sbjct: 375 EKGCQPNIVVYSAL 388
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + ++ EA+ + +++++ PN T + L+ GF ++G+ + EM
Sbjct: 385 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 444
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+ + Y++ I G C+ G +AM ++ M P + +++IHG ++
Sbjct: 445 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 504
Query: 300 QARQLFDEM--PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+LF+EM + + +PD+ YN ++ +L + ++ A++L++ M ++ D +T +
Sbjct: 505 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 564
Query: 358 MFFGL 362
L
Sbjct: 565 FLNAL 569
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 116/280 (41%), Gaps = 46/280 (16%)
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER---------------- 275
++F + ++ T+ I+ Y G FG ++F+ M+R
Sbjct: 49 QIFKSASQMGSYKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRA 108
Query: 276 --VACLP---------------------SLQTITTLIHGAGLVRNIHQARQLFD--EMPK 310
A LP S ++ +I GL H+A + ++ K
Sbjct: 109 YGKAHLPEKAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL---FHRALEFYECGVGGK 165
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
N+ P++ ++N +I ++ + ++ A+E+ EM ++ D TY T+ GL K ++
Sbjct: 166 TNISPNVLSFNLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDE 225
Query: 371 VCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
L D M IEG F P + T +L+ C + L + +G P+ + ++
Sbjct: 226 AVLLLDEMQIEGCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTII 284
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GLC +G+ ++A +M+ + ++ +Y L LV+
Sbjct: 285 NGLCLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVK 324
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ C +++EA ++ +L R P+ + ++ G +G V ++EM+
Sbjct: 455 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 514
Query: 240 LR--GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ +P VVTYNI + CK+ A+ L M C P L T ++ N
Sbjct: 515 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 574
Query: 298 IHQ-ARQLFDEMPKR 311
Q R+ DE+ R
Sbjct: 575 PPQDGREFLDELVVR 589
>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/439 (23%), Positives = 186/439 (42%), Gaps = 53/439 (12%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL----MSHVQRTHPSLLTLK 140
KA+E F + T +F L+++ + F +A E + P++L
Sbjct: 133 KAIELFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFYECGVGGKTNISPNVL--- 189
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN--VLLQAFCTQKEMKEAR 198
S ++++ + K + +E F M I+K + F L+ C + + EA
Sbjct: 190 SFNLVIKAMCKLGLVDRAIEVFREM------AIQKCEPDVFTYCTLMDGLCKEDRIDEAV 243
Query: 199 SVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ ++ + P++ T N+L+ G + GD+ + M L+G P+ VTYN I+G
Sbjct: 244 LLLDEMQIEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGL 303
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------------- 291
C KG A+ L + M C+P+ T TLI+G
Sbjct: 304 CLKGKLDKAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANE 363
Query: 292 -------AGLVR--NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+GL + +A L+ +M ++ +P+I Y+A+I L R L+ A E++ E
Sbjct: 364 YAYSTLISGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCE 423
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M K + TY ++ G K+ + +++ M + VP +L+ C + +
Sbjct: 424 MVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGK 483
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASY 460
+ + +W +++ RG P A ++ GLC+ G E + +ML + Q +Y
Sbjct: 484 LREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTY 543
Query: 461 RMLQRYLVQANANEKLEDL 479
+L R L + N+ DL
Sbjct: 544 NILLRALCKQNSISHAIDL 562
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/335 (27%), Positives = 151/335 (45%), Gaps = 19/335 (5%)
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN------N 212
+ FDRM+RE V I K F ++ +A+ ++A +F +++ F N
Sbjct: 100 FQVFDRMKRERRVFIEK----NFILVFRAYGKAHLPEKAIELFGRMVDEFQCRRTVRSFN 155
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRG---FRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+N+++ +E A+E ++E + G P+V+++N+ I CK G A+ +
Sbjct: 156 SVLNVII---QEGLFHRALE--FYECGVGGKTNISPNVLSFNLVIKAMCKLGLVDRAIEV 210
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F EM C P + T TL+ G I +A L DEM P +N +I+ L +
Sbjct: 211 FREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCFPSSVTFNVLINGLCK 270
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
D+ +L+D M K + VTY+T+ GL L+ L DRM+ K VP T
Sbjct: 271 KGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRMVASKCVPNDVT 330
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ R G++L L +RG + +A L++GL + EEA K+M+
Sbjct: 331 YGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKSEEAMGLWKKMV 390
Query: 450 VRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMI 483
+ Q + Y L L + +E E L M+
Sbjct: 391 EKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMV 425
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/185 (22%), Positives = 94/185 (50%), Gaps = 3/185 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + ++ EA+ + +++++ PN T + L+ GF ++G+ + EM
Sbjct: 401 YSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSLIKGFFKTGNSQKAIRVWKEMA 460
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+ + Y++ I G C+ G +AM ++ M P + +++IHG ++
Sbjct: 461 KNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVE 520
Query: 300 QARQLFDEM--PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+LF+EM + + +PD+ YN ++ +L + ++ A++L++ M ++ D +T +
Sbjct: 521 VGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNI 580
Query: 358 MFFGL 362
L
Sbjct: 581 FLNAL 585
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/269 (21%), Positives = 112/269 (41%), Gaps = 46/269 (17%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER------------------VACLP---- 280
++ T+ I+ Y G FG ++F+ M+R A LP
Sbjct: 76 YKSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAI 135
Query: 281 -----------------SLQTITTLIHGAGLVRNIHQARQLFD--EMPKRNLKPDIGAYN 321
S ++ +I GL H+A + ++ K N+ P++ ++N
Sbjct: 136 ELFGRMVDEFQCRRTVRSFNSVLNVIIQEGL---FHRALEFYECGVGGKTNISPNVLSFN 192
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IE 380
+I ++ + ++ A+E+ EM ++ D TY T+ GL K ++ L D M IE
Sbjct: 193 LVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIE 252
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
G F P + T +L+ C + L + +G P+ + ++ GLC +G+ ++
Sbjct: 253 GCF-PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDK 311
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
A +M+ + ++ +Y L LV+
Sbjct: 312 AVSLLDRMVASKCVPNDVTYGTLINGLVK 340
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 61/135 (45%), Gaps = 4/135 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ C +++EA ++ +L R P+ + ++ G +G V ++EM+
Sbjct: 471 YSVLIHGLCEDGKLREAMMMWTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEML 530
Query: 240 LR--GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ +P VVTYNI + CK+ A+ L M C P L T ++ N
Sbjct: 531 CQESDSQPDVVTYNILLRALCKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLN 590
Query: 298 IHQ-ARQLFDEMPKR 311
Q R+ DE+ R
Sbjct: 591 PPQDGREFLDELVVR 605
>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
Length = 847
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 169/411 (41%), Gaps = 45/411 (10%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH------------ 133
AL F++ P F + F L ILA+ A+ +M V +
Sbjct: 404 ALRLFRWAESQPGFRRSEFVFCAILEILAQNNLMRSAYWVMERVINANMHRIVDVLIGGC 463
Query: 134 -PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER------------------------- 167
S +++K + +++ SK E+ L FD+M +
Sbjct: 464 VSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSK 523
Query: 168 --EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
E++ + +FG + +N LL ++C ++++ + ++ R APN+ T N+L+
Sbjct: 524 AVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLIN 583
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G + G+ + EM+ G + S TYN I GY KG +A+ L EEM P
Sbjct: 584 GLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASP 643
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T + I+G + + A Q +M NL PD+ +YN +I R +L A L
Sbjct: 644 TVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLF 703
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
DE+ + VTY+T+ GL + LE +L MI P T +L+ C
Sbjct: 704 DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKM 763
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ + + ++ G +A + G G AF ++ML +
Sbjct: 764 GSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAK 814
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 85/362 (23%), Positives = 149/362 (41%), Gaps = 46/362 (12%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSM 142
KA+E ++ T+ PT + L + Q +L+S +QR P+ +T
Sbjct: 523 KAVEVYR-TMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVT---Y 578
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+++++ +SK +E+ M + G+ K + +N L+ + + + EA S+
Sbjct: 579 NVLINGLSKKGEFEQAKGLIGEMLK---TGL-KVSAYTYNPLIYGYFNKGLLAEALSLQE 634
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ + A P T N + G + G ++ +M+ P VV+YN I GYC+ G
Sbjct: 635 EMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLG 694
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A LF+E+ + P++ T TL+ G + A+QL EM + PDI Y
Sbjct: 695 NLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYT 754
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+++ + L+ A E DEM + + D+ Y T G +K L + M+
Sbjct: 755 ILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLA- 813
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+GF P +++V GLC G EEA
Sbjct: 814 ----------------------------------KGFPPDLIIYNVVVDGLCKLGNLEEA 839
Query: 442 FE 443
E
Sbjct: 840 SE 841
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 92/198 (46%), Gaps = 1/198 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C M +A +L+ P+ + N L+ G+ G++ + + E+
Sbjct: 648 YNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELR 707
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P++VTYN +DG C++G A +L EM P + T T L++G+ + ++
Sbjct: 708 SIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLS 767
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++ FDEM L+ D AY I ++ D + A L +EM K D + Y+ +
Sbjct: 768 MAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVV 827
Query: 360 FGLMKSSGLEGVCKLYDR 377
GL K LE +L +
Sbjct: 828 DGLCKLGNLEEASELLQK 845
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 94/221 (42%), Gaps = 6/221 (2%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN---IHQAR 302
SV ++ I Y KK + +F++M + P ++ ++ ++R+ + +A
Sbjct: 469 SVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILR---ILRDKDLMSKAV 525
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+++ M + +KP I YN ++ S + + ++L+ EM+ + ++VTY+ + GL
Sbjct: 526 EVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGL 585
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K E L M++ T L+ + + L+L ++ +G P
Sbjct: 586 SKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTV 645
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ + GLC GR +A + ML SY L
Sbjct: 646 ATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTL 686
>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
Length = 653
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 145/343 (42%), Gaps = 42/343 (12%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+++ + C + A S K+L P+ T L+ G G + + +M+
Sbjct: 110 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 169
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF+P+VVTY I+G CK G A+RL ME+ C P++ +TLI R + +A
Sbjct: 170 GFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEA 229
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F EM + + P+I YN++I L + + LM+EM + +I D T +T+
Sbjct: 230 FNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDA 289
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR----- 416
L K + + D MI P T LM C+ VD+ + ++ ++ +
Sbjct: 290 LCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVAN 349
Query: 417 ---------GFC---------------------PHGHALDLLVTGLCSRGRWEEAFECSK 446
G+C P+ + L+ GLC GR ++A
Sbjct: 350 VISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFH 409
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
+M+ R + +YR L YL K LD+ + L+A+
Sbjct: 410 EMVARGQIPDLVTYRTLSDYLC------KNRHLDKAMALLKAI 446
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/329 (24%), Positives = 154/329 (46%), Gaps = 3/329 (0%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+ EAF+ I GI +N L+ C E K ++ +++ S+ P+ T+
Sbjct: 225 QVTEAFNIFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ + G V M+ RG P+VVTYN +DG+C + A+++F+ M
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C+ ++ + TLI+G ++++ +A LF+EM ++ L P+ YN +I L L
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+ L EM + D VTY T+ L K+ L+ L + + P + ++
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C ++ +L+ L +G P+ ++++ GLC +G EA + +M
Sbjct: 464 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523
Query: 456 SEASYRMLQRYLVQAN-ANEKLEDLDRMI 483
++ +Y ++ R ++ N A +E L+ M+
Sbjct: 524 NDCTYNLITRGFLRNNEALRTIELLEEML 552
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/376 (23%), Positives = 157/376 (41%), Gaps = 14/376 (3%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRIS 150
+++ + P F + L + R +A+ + S + + P+++T S+ L ++
Sbjct: 200 SMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 259
Query: 151 KFQSYEETL-EAFD-RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+++ + E D ++ ++F N ++ A C + + EA V ++ R
Sbjct: 260 EWKHVTTLMNEMVDSKIMPDVFT---------LNTVVDALCKEGMVAEAHDVVDMMIHRG 310
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T N L+ G +V + MV + +V++YN I+GYCK AM
Sbjct: 311 VEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAM 370
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
LFEEM R P+ T TLIHG V + A LF EM R PD+ Y + L
Sbjct: 371 YLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYL 430
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ R L+ AM L+ +E D Y T+ G+ ++ LE L+ + P
Sbjct: 431 CKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNV 490
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +++ C + L+ + G P+ +L+ G E ++
Sbjct: 491 WTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 550
Query: 448 MLVRRRQVSEASYRML 463
ML R V ++ +L
Sbjct: 551 MLARGFSVDVSTTTLL 566
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 64/271 (23%), Positives = 109/271 (40%), Gaps = 1/271 (0%)
Query: 194 MKEARSVFVKLLSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA S F ++L + P + N LL ++ + + +M G P V T I
Sbjct: 51 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+ C A ++ ++ P T TTLI G + I +A LFD+M
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+P++ Y +I+ L + + +AA+ L+ ME+ + V + T+ L K +
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++ MI P T L+ C L ++D P L+ +V L
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C G EA + M+ R + + +Y L
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 321
>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
Length = 442
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 145/308 (47%), Gaps = 5/308 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL+A C + ++A + + + PNN T N+L+ G GDV +
Sbjct: 45 YNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLP 104
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +PS V YN + G C +GDA L EM R C P+ T +I+ +
Sbjct: 105 SHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQ 164
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA QL ++M K +I YNA+I+ L R+++ AM L+ +M+ D VTY+T+
Sbjct: 165 QAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLL 224
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL ++ +L D M + +P T L+ F C + + ++ + D+G
Sbjct: 225 KGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT 284
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +++GL + ++A E +M + + Y++L L N ++ +E+
Sbjct: 285 PNSITYSTIISGLAKATKLDQALELFNEM-GHKGFNPDKIYQLLAECL---NDDDTIEEA 340
Query: 480 DRMIKNLQ 487
+ ++ LQ
Sbjct: 341 IQTVRKLQ 348
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 128/288 (44%), Gaps = 15/288 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI-----LLLGFKESGDVTAMEMFY 235
FNV++ + C + +++A ++LL + + + T NI ++ G E +V
Sbjct: 150 FNVVIYSLCRKGLLQQA----IQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLL 205
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M G +P +VTYN + G C + DA L + M + CLP T TLI
Sbjct: 206 SKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQK 265
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A ++F +MP + P+ Y+ +IS L + L+ A+EL +EM K D + Y
Sbjct: 266 GLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDKI-Y 324
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ L +E + ++ + P T ++ C N + + +++ Y++
Sbjct: 325 QLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVS 384
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSKQMLVRRRQVSEA 458
G P +L+ GL G EA E CS+ +LV SEA
Sbjct: 385 SGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVLVNSLIKSEA 432
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 127/284 (44%), Gaps = 2/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +L+ C+ + +A + ++L PN T N+++ G + +M
Sbjct: 115 YNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMS 174
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTYN I+G C++ AM L +M+ C P + T TL+ G
Sbjct: 175 KHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWV 234
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L D M + PD +N +I L + + A+E+ +M +K +++TY T+
Sbjct: 235 DAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTII 294
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K++ L+ +L++ M F P + +L + + ++ + L D G
Sbjct: 295 SGLAKATKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGIS 353
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
PH + ++ GLC G+ E A + M+ + +Y +L
Sbjct: 354 PHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVIL 397
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 119/291 (40%), Gaps = 38/291 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N L+ C + ++++A SV +L R AP+ T NILL K G AME+ M
Sbjct: 10 YNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELI-DLM 68
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P+ VTYN+ +DG C +G DA+ L + C PS T++ G
Sbjct: 69 RAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERW 128
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L EM + N P+ +N +I SL R L A++L+++M + + VTY+ +
Sbjct: 129 GDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAI 188
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL + ++G L +M P T L+K
Sbjct: 189 INGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLK----------------------- 225
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GLCS RW +A E M ++ L +L Q
Sbjct: 226 ------------GLCSAARWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQ 264
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 66/151 (43%)
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++P+ YN +I +L + A+ ++D+M + D VTY+ + K G
Sbjct: 3 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+L D M P T +LM C VD L L L G P + ++ GL
Sbjct: 63 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
CS RW +A E +ML +EA++ ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVV 153
>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 578
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/374 (25%), Positives = 169/374 (45%), Gaps = 14/374 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P + +H L + ++A L S VQ P + T S+ L R + +
Sbjct: 195 PNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSL 254
Query: 159 LEAF---DRME--REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRF- 208
L F ++++ RE+F + + G + +N+L+ +C ++ EAR +F ++ R
Sbjct: 255 LNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGE 314
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T IL+ G+ V +H M+ RG P V +YNI I GYCK G+AM
Sbjct: 315 QPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMN 374
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSL 327
L E+M +P++ T +++ G I A +L DEM PD+ YN ++ SL
Sbjct: 375 LLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESL 434
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R + A+ + +R NV +Y+ + G K+ L+ L++ M VP
Sbjct: 435 CRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPD 494
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T +L+ ++D + L ++D+G P+ ++L+ GL GR + A + S
Sbjct: 495 IVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKISL 554
Query: 447 QMLVRRRQVSEASY 460
+ +R +Y
Sbjct: 555 YLSIRGYHPDVKTY 568
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 140/302 (46%), Gaps = 19/302 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-----------------APNNKTMNILLLGFK 223
+N ++ C + EAR + K++ + A K + LL GF
Sbjct: 200 YNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFC 259
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ V ++ M+ RG + ++ YNI ++GYC G+A +LF M P
Sbjct: 260 LNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTI 319
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T T L+HG L+ + +AR LF M +R L PD+ +YN +I + + AM L+++M
Sbjct: 320 TYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDM 379
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFR 402
K + + +TY+++ GL KS G+ KL D M + P T +L++ C
Sbjct: 380 FLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIEC 439
Query: 403 VDLGLNLWGYLI-DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
V+ + + +LI +R F P+ + ++L++G C R +EA M + +Y
Sbjct: 440 VEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYN 499
Query: 462 ML 463
+L
Sbjct: 500 IL 501
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 107/425 (25%), Positives = 178/425 (41%), Gaps = 65/425 (15%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
F + HP P+ F K L +A+MRY+ A +L + ++
Sbjct: 42 FHRMVDMHP--LPSIVEFTKILGTIAKMRYYATAIDLYTLME------------------ 81
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF 208
+ G+ F + FN+L+ FC +M A SV K+L
Sbjct: 82 ---------------------YKGVVPF-TVTFNILINCFCHMGQMDFAFSVMGKILKWG 119
Query: 209 A-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK--GCFGD 265
PN T L+ GF + + Y EMV R R V Y I+G CK G
Sbjct: 120 CRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIRFDDVLYGTLINGLCKSKIGKPRA 179
Query: 266 AMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A++L ++M ER P+L T++HG NI++AR L +M + + PDI Y+++I
Sbjct: 180 AVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEARVLCSKMIVQGIFPDIFTYSSLI 239
Query: 325 SSLIRC----------------RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
L R ++ A EL + M E+ HD + Y+ + G ++ +
Sbjct: 240 YGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKV 299
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
KL+ M+E P T T +LM +C+ +VD NL+ +I+RG P + ++L
Sbjct: 300 GEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNIL 359
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
+ G C R EA + M ++ + +Y + L ++ + D +++ +
Sbjct: 360 IKGYCKFERVGEAMNLLEDMFLKNLVPNIITYNSVVDGLCKSGG---ILDAWKLVDEMHY 416
Query: 489 VLPPP 493
PP
Sbjct: 417 CCQPP 421
>gi|410109883|gb|AFV61021.1| pentatricopeptide repeat-containing protein 11, partial
[Burroughsia fastigiata]
Length = 431
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-VQRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W ++ +P+ +L +I
Sbjct: 91 AVECYRLTREHKFWLPF-DTCRKVLEHLMKLKYFKLVWGFYEEFLECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
+ R K E R+ + +F I K+G +N L+ + ++ E +
Sbjct: 148 LXHRFCK--------EGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFKL 199
Query: 201 FVKL-LSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 200 KSAMHASGVXPDVYTYSVLINGLCKESKMDXANELF-DEMLVKGLVPNGVTFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + LP L T TLI+G +++QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEMSMKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMMREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ C V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDTGTYTMIINEVCKKGDVGKGSKLLKEMQXDGHAPSVVTYNVLMNG 431
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI +CK+G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEFLECGYPASLYFFNILXHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M + PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 189 RLGDLDEGFKLKSAMHASGVXPDVYTYSVLINGLCKESKMDXANELFDEMLVKGLVPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C ++ +L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLNQAHDLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 367 -RSVDAEKMMREMLSVGLKPDT 387
>gi|410109879|gb|AFV61019.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
macrostachya]
Length = 414
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 98/353 (27%), Positives = 157/353 (44%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L + +++YF W + + +P+ +L +I
Sbjct: 74 AIECYRLTREHKFWVPF-DTCRKVLEHMMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 130
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 131 LMHRFCK--------EGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 182
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F EM+ +G P+ VT+ IDG+C
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLDKGLVPNGVTFTTLIDGHC 241
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 242 KSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKI 301
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A E M ++ I D+V Y + GL + K+ M
Sbjct: 302 TYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRYLDAEKVLREM 361
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T T M++ FC V G L + G P ++L+ G
Sbjct: 362 LSAGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F + + PS+ + TL++G
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM +K + + V
Sbjct: 172 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 231
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G KS ++ ++Y +M+ P T L+ C + +L +
Sbjct: 232 TFTTLIDGHCKSGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 349
Query: 474 EKLEDLDRMIKN-LQAVLPPPT 494
+ D +++++ L A L P T
Sbjct: 350 -RYLDAEKVLREMLSAGLKPDT 370
>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
Length = 991
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 193/467 (41%), Gaps = 66/467 (14%)
Query: 64 LSSTLVENVLGRLFAAHSNG---LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
L+ ++ + LF A S AL FF++ + F T D+ LH+L+R R
Sbjct: 48 LAPSVTAAHVADLFRADSTAPEPATALAFFEWLARRDGFRHTADSHAALLHLLSRRRAPA 107
Query: 121 Q--------------------AWELMSHVQRTHPSLLTL--KSMSIMLSRISKFQSYEET 158
Q + + + ++RT + L L K + L +++F E
Sbjct: 108 QYERLVVSMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYM 167
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
+ ++ ++ + + +N +++++C + ++ A F LL P T N
Sbjct: 168 GRVYSQLVQDGLLP----DTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNA 223
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+LG+ +G++ + M L G + + +Y I I G C C A+ LF M+R
Sbjct: 224 LVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG 283
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P+++ T LI G + AR LFD MP+ + P + YNAMI + +N A+
Sbjct: 284 CSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDAL 343
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ + ME+ D+ TY+T+ +GL E +L + ++ F P T L+ +
Sbjct: 344 KIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAE-ELLNNAVKEGFTPTVVTFTNLINGY 402
Query: 398 CVNFRVD---------------LGLNLWGYLID--------------------RGFCPHG 422
C+ + D L L ++G LI+ G P+
Sbjct: 403 CMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNV 462
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ G C G+ + A E K M Q + +Y L LV+
Sbjct: 463 ITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 109/233 (46%), Gaps = 1/233 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P++ T N L+ G + A E+ + V GF P+VVT+ I+GYC F DA+R+
Sbjct: 356 PDDWTYNTLIYGLCDQKTEEAEELL-NNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRM 414
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+M C LQ LI+ + +A++L +E+ L P++ Y ++I +
Sbjct: 415 KNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCK 474
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++ A+E++ ME + TY+++ +GL+K L L +M + +P T
Sbjct: 475 SGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVIT 534
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L++ C D L+ + G P HA +L LC GR EEA+
Sbjct: 535 YTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAY 587
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/340 (25%), Positives = 139/340 (40%), Gaps = 18/340 (5%)
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSR 207
I F T A +ER I G S ++VLL A C QK + EA + ++ L
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTP-DSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
IL+ G + Y+EM G +PS TY + I+ YCK+G DA
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAE 724
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +MER P + T LI G G + I +A M + +P+ Y ++ L
Sbjct: 725 DLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHL 784
Query: 328 IRCR----------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ +L+ +L++ M + + TY ++ G K+ LE
Sbjct: 785 LKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEA 844
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
C L D M P +L+K C + L+ + + GF P + LLV G
Sbjct: 845 CLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVG 904
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
LC+ G +E+ +L E ++++L L++A
Sbjct: 905 LCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAG 944
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 83/407 (20%), Positives = 155/407 (38%), Gaps = 40/407 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTPT F ++ FD A M + + L L+ +++ + K +E
Sbjct: 388 FTPTVVTFTNLINGYCMAEKFDDALR-MKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEA 446
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
E + + V + ++ +C ++ A V +K++ R PN T N
Sbjct: 447 KELLNEISANGLVP----NVITYTSIIDGYCKSGKVDIALEV-LKMMERDGCQPNAWTYN 501
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + + +M G P+V+TY + G C + F +A RLFE ME+
Sbjct: 502 SLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQN 561
Query: 277 ACLPSLQTI--------------------------------TTLIHGAGLVRNIHQARQL 304
P TTLI G N A L
Sbjct: 562 GLKPDEHAYAVLTDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATL 621
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ M PD Y+ ++ +L + + LN A+ ++D+M + I Y + +++
Sbjct: 622 IERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLR 681
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++Y+ M P T + + +C R++ +L + G P
Sbjct: 682 EGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVT 741
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++L+ G G + AF K+M+ + + +Y +L ++L++ N
Sbjct: 742 YNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGN 788
>gi|47848296|dbj|BAD22160.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
Length = 454
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 148/313 (47%), Gaps = 13/313 (4%)
Query: 51 HPTLLQHLPQTTP---LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFE 107
H L+Q L L+ +V+ +L F + AL FF++ + T A
Sbjct: 18 HHDLIQCLGADCSGIRLTGNIVDTLL---FKFGDDWKSALGFFQWAQSRDDYRHTAYACN 74
Query: 108 KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+ + +L +MR DQ WEL+S + L+T+++++ + R++ + +++ + FD++E
Sbjct: 75 RMVDLLGKMRQIDQMWELLSDMH--GRGLVTVETVAKSIRRLAGARRWKDVVLLFDKLED 132
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
+G+ + +E NVLL C +++++ AR VF L P+ T NI + G+
Sbjct: 133 ---MGLER-NTETMNVLLDVLCKERKIEVAREVFAVLSPHIPPDAYTFNIFVHGWCSIRR 188
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ EM RGF PSV+TY ++ YCK+ F + + M C P++ T T
Sbjct: 189 IDEAMWTIEEMKRRGFPPSVITYTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTM 248
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEK 346
++ +A + M KPD YN++I+ L + L A ++ EM
Sbjct: 249 IMTSLAKCERFEEALSVSHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMN 308
Query: 347 RIGHDNVTYHTMF 359
+ H+ TY+TM
Sbjct: 309 GVSHNLATYNTMI 321
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 31/273 (11%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRI 149
F + PH P F +H +R D+A + ++R PS++T
Sbjct: 162 FAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVIT----------- 210
Query: 150 SKFQSYEETLEAF--DRMEREIFVGIRKFGSE-------EFNVLLQAFCTQKEMKEARSV 200
Y LEA+ R R ++ + GS+ + +++ + + +EA SV
Sbjct: 211 -----YTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSV 265
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ S P+ N L+ +SG + A ++F EM + G ++ TYN I +C
Sbjct: 266 SHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFC 325
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-IHQARQLFDEM-PKRNLKPD 316
G DA+ + +EME +C P +Q+ L+ R R L E+ K NL D
Sbjct: 326 YYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLD 385
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ Y +I L R D A +L DEM I
Sbjct: 386 LDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIA 418
>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
Length = 582
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 148/315 (46%), Gaps = 9/315 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N L+ C K++KEA + +++ + PN+ T L+ G + G + AME+ M
Sbjct: 36 YNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELL-EAM 94
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+GF VV Y I G+C G LF+EM ++ T + L+HG +
Sbjct: 95 KKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQW 154
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYH 356
+A + + M + + PD+ Y +I L C+D A AM+L++ M EK NVTY+
Sbjct: 155 KEANTVLNAMAEHGIHPDVVTYTGLIDGL--CKDGRATHAMDLLNLMVEKGEEPSNVTYN 212
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K + K+ MIE T LMK C +VD L L+ + D
Sbjct: 213 VLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDN 272
Query: 417 GFC--PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
C P+ ++L+ GLC GR +A + ++M+ + + +Y ML ++A +
Sbjct: 273 ENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIK 332
Query: 475 KLEDLDRMIKNLQAV 489
+ +L + + +L V
Sbjct: 333 EAMELWKQVLDLGFV 347
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 127/278 (45%), Gaps = 1/278 (0%)
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
MNI+L G +G V EM + P +V+YN I+G CK +A+ L EME
Sbjct: 1 MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P+ T TTL+ G + +A +L + M K+ D+ Y +IS +L+
Sbjct: 61 AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
EL DEM K I + VTY + GL + + + + M E P T L+
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + R ++L ++++G P ++L++GLC G +AF+ + M+ + ++
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240
Query: 455 VSEASYRMLQRYLV-QANANEKLEDLDRMIKNLQAVLP 491
+Y L + L + +E L+ + M N + P
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEP 278
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 129/274 (47%), Gaps = 3/274 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N L++ C + ++ EA +F + PN T N+L+ G + G +T + +
Sbjct: 246 YNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRK 305
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV +G ++VTYN+ + G K G +AM L++++ + +P+ T + LI G +R
Sbjct: 306 MVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRM 365
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
++ A+ LF EM L P + YN +++SL + L A L EM D ++++T
Sbjct: 366 LNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNT 425
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M G +K+ + V +L +M+E P T L+ +D + ++ G
Sbjct: 426 MIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASG 485
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
F P D L+ GL S+G E QM +
Sbjct: 486 FTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAK 519
>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
Length = 442
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/330 (25%), Positives = 146/330 (44%), Gaps = 19/330 (5%)
Query: 97 PHFTPTPDAF-EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
P F+ + + F K+LH D A + + HP ++ + +L+ I+K + Y
Sbjct: 7 PFFSSSQNNFHSKSLH----FNTLDDALSSFNRLLHMHPPP-SIVDFAKLLTSIAKMKHY 61
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAP 210
L +M+ FG N+L+ +FC + A SV K+L P
Sbjct: 62 STVLSLSTQMD--------SFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQP 113
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G G + + +M+ GF+P+VVTY I+G CK G A+RL
Sbjct: 114 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 173
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
ME+ C P + T++I R + +A LF +M + + PDI Y +++ +L
Sbjct: 174 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 233
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
+ L+++M +I D V + T+ L K + ++ D MI+ P T
Sbjct: 234 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 293
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
LM C+ +D + ++ ++ +GF P
Sbjct: 294 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAP 323
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 2/274 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+F LL + K S+ ++ S PN T+NIL+ F V ++
Sbjct: 47 DFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKI 106
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G +P T+ I G C +G G+A+ LF++M P++ T TLI+G V N
Sbjct: 107 LKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNT 166
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L M + N +PD+ Y ++I SL + R + A L +M + I D TY ++
Sbjct: 167 SAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSL 226
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L + V L ++M+ K +P ++ C +V + +I RG
Sbjct: 227 VHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGV 286
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
P L+ G C + +EA + M+VR+
Sbjct: 287 EPDVVTYTTLMDGHCLQSEMDEAVKVF-DMMVRK 319
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/403 (21%), Positives = 155/403 (38%), Gaps = 60/403 (14%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISK 151
L H H P+ F K L +A+M+++ L + + P++ TL + I+
Sbjct: 36 LLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL------INS 89
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
F AF + + + +G + F L++ C + ++ EA +F K++ F P
Sbjct: 90 FCHLNRVGFAFSVLAKILKLG-HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQP 148
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N T L+ G + G+ +A M +P VV Y ID CK +A LF
Sbjct: 149 NVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLF 208
Query: 271 EEMERVACLPSLQTITTLIHG---------------------------------AGLVR- 296
+M P + T T+L+H L +
Sbjct: 209 SQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKE 268
Query: 297 -NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A ++ D M +R ++PD+ Y ++ +++ A+++ D M K D ++Y
Sbjct: 269 GKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISY 328
Query: 356 HTMFFGLMKSSG-------LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
T+ K G + G+ K ++G V R MK F + G
Sbjct: 329 TTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRK--DKMKLF------EKGRT 380
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L +++ P+ +V LC G+ EA + M+ R
Sbjct: 381 LLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKR 423
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/240 (21%), Positives = 99/240 (41%), Gaps = 36/240 (15%)
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
I S I + EAF+ + + GI + L+ A C E K ++ +
Sbjct: 187 IYTSIIDSLCKDRQVTEAFNLFSQMVGQGISP-DIFTYTSLVHALCNLCEWKHVTTLLNQ 245
Query: 204 LL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++ S+ P+ + ++ + G VT M+ RG P VVTY +DG+C +
Sbjct: 246 MVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSE 305
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIH-----GAGLV---------------------- 295
+A+++F+ M R P + + TTLI+ G GLV
Sbjct: 306 MDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVE 365
Query: 296 -------RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ + R L +EM + P++ ++ ++ +L + + A +++D M ++ +
Sbjct: 366 VIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 425
>gi|297599556|ref|NP_001047351.2| Os02g0601600 [Oryza sativa Japonica Group]
gi|255671066|dbj|BAF09265.2| Os02g0601600 [Oryza sativa Japonica Group]
Length = 466
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 137/285 (48%), Gaps = 7/285 (2%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
LF + AL FF++ + T A + + +L +MR DQ WEL+S +
Sbjct: 55 LFKFGDDWKSALGFFQWAQSRDDYRHTAYACNRMVDLLGKMRQIDQMWELLSDMH--GRG 112
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
L+T+++++ + R++ + +++ + FD++E +G+ + +E NVLL C +++++
Sbjct: 113 LVTVETVAKSIRRLAGARRWKDVVLLFDKLED---MGLER-NTETMNVLLDVLCKERKIE 168
Query: 196 EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR VF L P+ T NI + G+ + EM RGF PSV+TY ++
Sbjct: 169 VAREVFAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVITYTTVLE 228
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
YCK+ F + + M C P++ T T ++ +A + M KP
Sbjct: 229 AYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSVSHRMKSSGCKP 288
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
D YN++I+ L + L A ++ EM + H+ TY+TM
Sbjct: 289 DTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMI 333
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 114/273 (41%), Gaps = 31/273 (11%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRI 149
F + PH P F +H +R D+A + ++R PS++T
Sbjct: 174 FAVLSPHIPPDAYTFNIFVHGWCSIRRIDEAMWTIEEMKRRGFPPSVIT----------- 222
Query: 150 SKFQSYEETLEAF--DRMEREIFVGIRKFGSE-------EFNVLLQAFCTQKEMKEARSV 200
Y LEA+ R R ++ + GS+ + +++ + + +EA SV
Sbjct: 223 -----YTTVLEAYCKQRNFRRVYEVLDSMGSQGCHPNVITYTMIMTSLAKCERFEEALSV 277
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
++ S P+ N L+ +SG + A ++F EM + G ++ TYN I +C
Sbjct: 278 SHRMKSSGCKPDTLFYNSLINLLGKSGHLFEASQVFRVEMPMNGVSHNLATYNTMISIFC 337
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-IHQARQLFDEM-PKRNLKPD 316
G DA+ + +EME +C P +Q+ L+ R R L E+ K NL D
Sbjct: 338 YYGRDDDALNVLKEMEAQSCKPDIQSYRPLLRLFLSRRGQADTVRHLLSELTSKHNLGLD 397
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ Y +I L R D A +L DEM I
Sbjct: 398 LDTYTLLIHGLCRVGDTVWAYQLFDEMVSSEIA 430
>gi|356561416|ref|XP_003548977.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Glycine max]
Length = 456
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 95/385 (24%), Positives = 170/385 (44%), Gaps = 10/385 (2%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSY 155
H TP F + L LA+M+++ A L V+ P+L+TL + I+ F
Sbjct: 47 HHTPPIVEFGEILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNIL------INCFCHL 100
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ +F + + + +G + + L++ C + E++++ K++++ F N +
Sbjct: 101 GQMSFSFSVLGKILKLGYQP-NTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQVS 159
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
LL G + G+ F + +VV YN IDG CK +A + EM
Sbjct: 160 YGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEMN 219
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P++ T TTLI G L + A L +EM +N+ P++ Y +I +L + +
Sbjct: 220 ARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVK 279
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ EM + D VTY ++ G K+ L+ L+ +M E P T L+
Sbjct: 280 EAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALI 339
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C R+ L+ L+ +G C ++++ GLC G +EA +M
Sbjct: 340 DGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCI 399
Query: 455 VSEASYRMLQRYLVQANANEKLEDL 479
+ ++ ++ R L + + N+K E L
Sbjct: 400 PNVVTFEIIIRSLFKKDENDKAEKL 424
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 88/200 (44%), Gaps = 1/200 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC ++ A S+ + +L PN T IL+ + G V + EM
Sbjct: 230 YTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKVKEAKNLLAEMH 289
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VVTY +DG+CK A LF +M+ P+ T T LI G +
Sbjct: 290 YRGQPADVVTYTSLLDGFCKNQNLDKATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLK 349
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF ++ + D+ YN MI L + L+ A+ + +ME+ + VT+ +
Sbjct: 350 DAQKLFQDLLVKGCCIDVCTYNVMIGGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIII 409
Query: 360 FGLMKSSGLEGVCKLYDRMI 379
L K + KL MI
Sbjct: 410 RSLFKKDENDKAEKLLHEMI 429
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/239 (22%), Positives = 109/239 (45%), Gaps = 10/239 (4%)
Query: 113 LARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L + + ++A++ S + + P+++T ++ I F + AF + I
Sbjct: 202 LCKDKLVNEAYDFYSEMNARGIFPNVITYTTL------IGGFCLAGQLTGAFSLLNEMIL 255
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVT 229
I + +L+ A C + ++KEA+++ ++ R P + T LL GF ++ ++
Sbjct: 256 KNINP-NVYTYAILIDALCKEGKVKEAKNLLAEMHYRGQPADVVTYTSLLDGFCKNQNLD 314
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ +M G +P+ TY IDG CK G DA +LF+++ C + T +I
Sbjct: 315 KATALFMKMKEWGIQPNKYTYTALIDGLCKGGRLKDAQKLFQDLLVKGCCIDVCTYNVMI 374
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
G + +A + +M P++ + +I SL + + + A +L+ EM K +
Sbjct: 375 GGLCKEGMLDEALAIKSKMEDNGCIPNVVTFEIIIRSLFKKDENDKAEKLLHEMIAKGL 433
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 103/265 (38%), Gaps = 37/265 (13%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGY-CKKGCFGDAMRLFEEMERVACLPSLQTI-------- 285
++ M+L P +V + I GY K + A+ L ++ME P+L T+
Sbjct: 40 FNGMLLMHHTPPIVEFG-EILGYLAKMKHYSTAISLSKQMEVKGIEPNLVTLNILINCFC 98
Query: 286 ---------------------------TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
TTL+ G L + ++ D++ + + +
Sbjct: 99 HLGQMSFSFSVLGKILKLGYQPNTITLTTLMKGLCLKGEVQKSVHFHDKVVAQGFQMNQV 158
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+Y +++ L + + A++ + +E+ G + V Y+T+ GL K + Y M
Sbjct: 159 SYGTLLNGLCKIGETRCAIKFLRMIEDSSTGLNVVMYNTIIDGLCKDKLVNEAYDFYSEM 218
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
P T L+ FC+ ++ +L +I + P+ + +L+ LC G+
Sbjct: 219 NARGIFPNVITYTTLIGGFCLAGQLTGAFSLLNEMILKNINPNVYTYAILIDALCKEGKV 278
Query: 439 EEAFECSKQMLVRRRQVSEASYRML 463
+EA +M R + +Y L
Sbjct: 279 KEAKNLLAEMHYRGQPADVVTYTSL 303
>gi|125541207|gb|EAY87602.1| hypothetical protein OsI_09013 [Oryza sativa Indica Group]
Length = 555
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 186/432 (43%), Gaps = 19/432 (4%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY----F 119
L++ LV +VL RL + A FF + + + + IL+ RY F
Sbjct: 110 LTTPLVADVLHRL---RYDEKLAFRFFVWASHQGGYEHEAATYNDVIDILSGTRYKARQF 166
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG-S 178
+++ H++R + + + +L + E+ L ++ ++ V +R +
Sbjct: 167 GVLCDVLDHMKRRRTRSVPVDDLLGILRAYT-----EKHLTHLRKLAKKRRVRMRTPPET 221
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ NVLL AFC ++EA +VF ++ + N +T +IL G+ + D EM
Sbjct: 222 DALNVLLDAFCKSGMVREAEAVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKVLEEM 281
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL---PSLQTITTLIHGAGLV 295
+ P TYN ID +C G +A LFE M P+ +T + +I
Sbjct: 282 IQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKA 341
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + +L EM K PD+ Y +I ++ L+AA ++DEM + D VTY
Sbjct: 342 GQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTY 401
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ L + +L +RMIE P T MLM F D +N+W +
Sbjct: 402 NCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDK 461
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
RG + ++ GL GR E+A +++ R ++ SY+ +++ +A
Sbjct: 462 RGCHRAVDTYETMIDGLFDSGRTEDATTLLDEVINRGMKL---SYKKFDAIMLRLSAVGN 518
Query: 476 LEDLDRMIKNLQ 487
L + R+ ++++
Sbjct: 519 LGAIHRLSEHMR 530
>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
Length = 1039
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/425 (23%), Positives = 178/425 (41%), Gaps = 27/425 (6%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
++ TP A+ L + ++A+ + V++ +LT + + ++ SK
Sbjct: 558 MEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--VKKG--VVLTKVTYTSLVDGFSKAG 613
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK 213
+ E ++M E K S ++VLLQA C QK++ EA S+ ++ R N
Sbjct: 614 NTEFAAALIEKMVNEGC----KADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNI 669
Query: 214 TMNILLLG--FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+++ KE A MF +EM+ G +PS +TY + I YCK G +A L
Sbjct: 670 VAYTIIISEMIKEGKHDHAKSMF-NEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EMER P + T I+G G + + A M + +P+ Y ++ ++
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMS 788
Query: 332 DLNA----------------AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
NA +L++ M + + VTY ++ G K++ LE C L
Sbjct: 789 LANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLL 848
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
D M+ P ML+K C + + +I+ GF PH + L+TGLC
Sbjct: 849 DHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLCDE 908
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTR 495
G +++A +L +E ++++L L++A + L ++N + T
Sbjct: 909 GDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRHCRIDSETY 968
Query: 496 QQVAQ 500
V
Sbjct: 969 SMVTN 973
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 100/380 (26%), Positives = 164/380 (43%), Gaps = 30/380 (7%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY---FD-----------------QAWEL 125
AL FF++ + P F T + L +LAR R +D +A +
Sbjct: 73 ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDKLVVSMISCSGTAEDMREAVDA 132
Query: 126 MSHVQRTHPSLLTL--KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ ++R L L K ++ L + +F E + + ++ +E + + +N
Sbjct: 133 IQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLP----DTVTYNT 188
Query: 184 LLQAFCTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++ A+C + + A F +LL S + T N LLLG+ +GD+ M L
Sbjct: 189 MIMAYCKEGSLAIAHRYF-RLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLM 247
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G R + +Y I I G C+ C +A+ L M + C P+L T T LI G IH A
Sbjct: 248 GCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDA 307
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
R L DEMP+R + P + YNAMI + L A+ + ME D+ TY+++ G
Sbjct: 308 RVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHG 367
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L E +L + I F P T ++ +C ++D L + +I
Sbjct: 368 LCGGKPDEAE-ELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLD 426
Query: 422 GHALDLLVTGLCSRGRWEEA 441
A +L++ L + R +EA
Sbjct: 427 LQAYGVLISVLIKKHRLKEA 446
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/263 (25%), Positives = 114/263 (43%), Gaps = 2/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +C +K+A + + P++ T N L+ G G E + +
Sbjct: 326 YNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-GGKPDEAEELLNGAI 384
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RGF P+V+T+ I+GYCK DA+R+ M C LQ LI +
Sbjct: 385 ARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLK 444
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +E+ L P++ Y ++I + + + AA+E+ E + + TY ++
Sbjct: 445 EAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLI 504
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+GL++ L L +M E P T L++ C D L+ + G
Sbjct: 505 YGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 564
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P A ++L LC GR EEA+
Sbjct: 565 PDEQAYNVLTDALCKSGRAEEAY 587
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/419 (21%), Positives = 166/419 (39%), Gaps = 41/419 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F+PT F ++ + D A + S + + L L++ +++S + K +E
Sbjct: 388 FSPTVITFTNIINGYCKAEKIDDALRVKS-IMISSKCKLDLQAYGVLISVLIKKHRLKEA 446
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
+ + EIF + ++ A+C ++ A VF KL PN T +
Sbjct: 447 KDTLN----EIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVF-KLTEHEGCRPNAWTYS 501
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + + +M G P V+TY I G CKK F +A RLFE ME+
Sbjct: 502 SLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 561
Query: 277 ACLPSLQ--------------------------------TITTLIHGAGLVRNIHQARQL 304
P Q T T+L+ G N A L
Sbjct: 562 GLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAAL 621
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
++M K D Y+ ++ +L + + LN A+ ++D+M + + + V Y + ++K
Sbjct: 622 IEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIK 681
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ +++ MI P T + + +C R++ +L G + G P
Sbjct: 682 EGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVT 741
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRM 482
++ + G G + AF K+M+ + + +Y +L ++ ++ + AN D M
Sbjct: 742 YNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGM 800
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 45/222 (20%), Positives = 92/222 (41%), Gaps = 26/222 (11%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIML 146
F K +L + H+ T + D W+L+ + + +P+ +T S+ +
Sbjct: 784 FLKMSLANAHYVDTSGMWNWI--------KLDTVWQLLERMVKHGLNPTAVTYSSI---I 832
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE-FNVLLQAFCTQKEMKEARSVFVKLL 205
+ K EE D M +G +EE + +L++ C K ++A S ++
Sbjct: 833 AGFCKATRLEEACVLLDHM-----LGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMI 887
Query: 206 -SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
F P+ ++ + L+ G + GD + + +++ + + V + I DG K G
Sbjct: 888 ECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVD 947
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+L ME C +T + + + NIH+A +++
Sbjct: 948 ICSQLLSAMENRHCRIDSETYSMVTN------NIHEASGMYE 983
>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Vitis vinifera]
gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
Length = 627
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/348 (24%), Positives = 157/348 (45%), Gaps = 16/348 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
+P A+ +H + ++ A L + + + HP+++T + L + K +
Sbjct: 269 ISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEAN 328
Query: 157 ETLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK 213
L+ I++ S + +N L+ FC + + +AR +FV + S+ +
Sbjct: 329 HLLKLM----------IQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDA 378
Query: 214 -TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+ N+L+ G+ +SG + + Y EM+ + P+V+TYN + G ++G DA LF E
Sbjct: 379 VSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGE 438
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ P T L+ G ++ +A +LF + + +P I +N +I L + R
Sbjct: 439 MKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARK 498
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A EL + + + + + +TY M GL KS LE L+ M E P T
Sbjct: 499 IEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNT 558
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
LM+ FC N + + L + ++ F P + ++V L ++ E
Sbjct: 559 LMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 128/269 (47%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL+ A C +M+EA + ++ R +P+ T N L+ GF G + + M
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G V+YN+ I+GYCK G +A +L+ EM +P++ T TL+ G +
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVR 430
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF EM +L P+ YN ++ L + L+ AMEL +E ++ +
Sbjct: 431 DAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ +E +L++R+ P T +++ C + +++ +L+ + ++G
Sbjct: 491 DGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCA 550
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P+ + L+ G C ++ E ++M
Sbjct: 551 PNLVTFNTLMRGFCQNDEMQKVVELLQEM 579
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 137/300 (45%), Gaps = 1/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ + C + + + +F+++ R +P+ + ++ G +G + ++EMV
Sbjct: 241 YCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMV 300
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+VVT+N+ ID CK G +A L + M + P T TLI G L I
Sbjct: 301 DEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRID 360
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR LF M + ++ D +YN +I+ + + A +L EM K I +TY+T+
Sbjct: 361 DARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLL 420
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + + L+ M P++ T +L+ C N + + L+ YL + F
Sbjct: 421 TGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQ 480
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ GLC + E A E ++ + + +Y ++ L ++ E +DL
Sbjct: 481 PSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDL 540
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/390 (24%), Positives = 155/390 (39%), Gaps = 55/390 (14%)
Query: 100 TPTPDAFEKTLHILARM-RYFD--QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
TP +F L +A++ RYFD ++ MS + P +TL +I+++ +
Sbjct: 89 TPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLA-PDFITL---NILINCYCNLNKVD 144
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
L M R + F L++ C + EA + K++ + PN T
Sbjct: 145 FGLAVLGEMLRRG----HSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTY 200
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRG-------FRPSVVTYNIRIDGYCKKGCFGDAMR 268
LL G +G+ T + + HE +L G +P++V Y ID CK G
Sbjct: 201 GTLLNGLCMTGN-TMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKE 259
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF EM+ P + +++IHG A+ LF+EM + P++ +N +I +L
Sbjct: 260 LFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALC 319
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL---------------MKSSGLE---- 369
+ + A L+ M ++ D TY+T+ G M+S G+E
Sbjct: 320 KAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAV 379
Query: 370 -------GVC---------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
G C KLY M+ + +P T L+ +V NL+G +
Sbjct: 380 SYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM 439
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P ++L+ GLC EA E
Sbjct: 440 KVHDLTPESCTYNILLDGLCKNNHLSEAME 469
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 99/270 (36%), Gaps = 46/270 (17%)
Query: 258 CKKGCF--GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
CK G +A +F + + P + + TL+ ++ L+ M L P
Sbjct: 66 CKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAP 125
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEK----------------------------- 346
D N +I+ ++ + ++ EM +
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185
Query: 347 ----RIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK------FVPKTRTVVMLM 394
R+G+ + VTY T+ GL + KL++ M+ G P ++
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + +D G L+ + RG P A ++ G+C GRWE A +M+
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+ ++ +L L +A K+E+ + ++K
Sbjct: 306 PNVVTFNVLIDALCKAG---KMEEANHLLK 332
>gi|357142780|ref|XP_003572691.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04130,
mitochondrial-like [Brachypodium distachyon]
Length = 501
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 96/387 (24%), Positives = 175/387 (45%), Gaps = 18/387 (4%)
Query: 71 NVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
N++ L + + K AL F++ ++ T A + + +L +MR DQ W+L+S +
Sbjct: 84 NIVDGLLSKFGDDWKSALGLFQWAQSSGNYKHTAYACSRMIDLLGKMRQIDQMWDLLSDM 143
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
L+T+++ + + R++ + +++ + FD++ +G+ + +E NVLL A C
Sbjct: 144 HCR--GLVTVEAAATSIRRLAGARRWKDAVLLFDKLGD---MGLER-NTETMNVLLDALC 197
Query: 190 TQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+K+++ AR VF+ L P+ T NI + G+ + + EM +GF PSV+T
Sbjct: 198 KEKKVEVARKVFLVLSPHIQPDAYTFNIFVHGWCSARRIDEAMWTIEEMKAQGFPPSVIT 257
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y ++ YCK+ F + + M C P++ T T ++ +A + M
Sbjct: 258 YTTVLEAYCKQHNFRMVYEILDSMSSEGCHPNVITYTMIMTSLAKCHMFEEALSVSHRMK 317
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMFFGLMKSSGL 368
KPD YN++I+ L + L+ A ++ EM + TY+TM
Sbjct: 318 SSGCKPDTLFYNSLINLLGKAGHLSEASQVFQVEMPMNGVPRSLATYNTMISVFCYKDLD 377
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHGHALD- 426
E + M P +T L++ F D + NL L+++ H LD
Sbjct: 378 EDALSVLKEMETQSCKPDLQTYRPLLRLFLSRRGQDDTVRNLLNELMNK----HSLGLDL 433
Query: 427 ----LLVTGLCSRGRWEEAFECSKQML 449
LL+ GLC G + A+ +M+
Sbjct: 434 DTYTLLIHGLCRVGETDWAYRLFDEMV 460
>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Cucumis sativus]
Length = 757
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 175/423 (41%), Gaps = 50/423 (11%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KAL+FF + Q +T T ++ L IL R R+ + A + +++
Sbjct: 94 KALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR------------ 140
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
SR GI K + FN L++ F +E+ VF +
Sbjct: 141 --SR-----------------------GIVKLEARFFNSLMRNFNRAGLFQESIKVFTIM 175
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGC 262
S +P+ T N LL + G + Y EM+ G P T+NI I G+C G
Sbjct: 176 KSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGM 235
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAY 320
D R+F ++ R C P + T TL+ G + A + M K+ +L P++ Y
Sbjct: 236 VDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTY 295
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI- 379
+I R++ A+ + +EM + + +N+TY+T+ GL ++ E + + +
Sbjct: 296 TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAG 355
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+G F P T T LM C +D L ++ + + P LV LC G +E
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415
Query: 440 EAFECSKQMLVRRRQVSE-------ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+A + ++L R+ +S A+Y + +YL + +K E R + PP
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Query: 493 PTR 495
+
Sbjct: 476 SYK 478
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 76/352 (21%), Positives = 150/352 (42%), Gaps = 39/352 (11%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-------- 207
++ L+ F+RM E+ + + S ++ L+++ C ++A + KLL R
Sbjct: 380 DDALKVFERMS-ELKI---QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDG 435
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR--PSVVTYNIRIDGYCKKGCFGD 265
P N + E+G E + +++ RG + PS Y I G+CK+G F
Sbjct: 436 CKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS---YKTLIMGHCKEGTFES 492
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
L M R LP +T +LI+G + A Q ++M + + +P+ ++++++
Sbjct: 493 GYELLVLMLRKDFLPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILA 552
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L+ + + L+ M +K I N+++ T L+ +G+ ++ G
Sbjct: 553 KLLEQGRTSESASLIQLMLDKNI-RQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYG---- 607
Query: 386 KTRTVVM--LMKFFCVNFRVDLGLNLWGY------LIDRGFCPHGHALDLLVTGLCSRGR 437
K +V M L+++ C +V G L + +D C + ++ LC +
Sbjct: 608 KGYSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLC------NTVIFQLCEINK 661
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
EAF +++ + L+ V A EKLE+ + + K ++ V
Sbjct: 662 LSEAFSLYYKLVEMGVHQQLSCQNQLK---VSLEAGEKLEEAEFVSKRMEPV 710
>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
Length = 641
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 158/348 (45%), Gaps = 19/348 (5%)
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ + F+S E+ L DRM E V + K F V+ +A+ ++A +F ++
Sbjct: 71 ANLGDFKSLEKVL---DRMRCEKRVVVEKC----FVVIFKAYGKAHLPEKAVGLFDRMAY 123
Query: 207 RFAPN------NKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIRIDGYC 258
F N +N+++ +E A+E + H + +G P+V+T+N+ I C
Sbjct: 124 EFECKRTVKSFNSVLNVII---QEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMC 180
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G DA+++F +M C P + T TL+ G I +A L DEM P
Sbjct: 181 KVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 240
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I+ L + DL +L+D M K + VTY+T+ GL LE L DRM
Sbjct: 241 TFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRM 300
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ K VP T ++ R G + + +RG+ + + L++GL G+
Sbjct: 301 VSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKS 360
Query: 439 EEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMIKN 485
+EA + K+M V+ +++ Y + L + +E LE L M N
Sbjct: 361 QEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNN 408
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 92/403 (22%), Positives = 167/403 (41%), Gaps = 16/403 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLK 140
+ALEF+ + +P+ F + + ++ D A ++ V + P + T
Sbjct: 149 RALEFYNHVIGAKGVNISPNVLTFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTY- 207
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE-EFNVLLQAFCTQKEM-KEAR 198
++ + K +E + D M+ + F S FNVL+ C + ++ + A+
Sbjct: 208 --CTLMDGLCKADRIDEAVSLLDEMQID-----GCFPSPVTFNVLINGLCKKGDLARVAK 260
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
V L APN T N L+ G G + MV P+VVTY I+G
Sbjct: 261 LVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 320
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G D R+ ME + + LI G +A QLF EM + + +
Sbjct: 321 KQGRALDGARVLALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTI 380
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y+A+I L R + A+E++ EM R + TY ++ G ++ +++ M
Sbjct: 381 VYSAVIDGLCRDGKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDM 440
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ F +L+ C + +V + +W ++ +G P A ++ GL + G
Sbjct: 441 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLV 500
Query: 439 EEAFECSKQMLVRR--RQVSEASYRMLQRYLVQANANEKLEDL 479
E+A + +ML + Q +Y +L L + ++ + DL
Sbjct: 501 EDALQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDL 543
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/219 (26%), Positives = 115/219 (52%), Gaps = 15/219 (6%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++S + K +E ++ F +E+ V + + ++ ++ C + EA V
Sbjct: 348 SALISGLFKEGKSQEAMQLF----KEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLS 403
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++ + R PN T + L+ GF E+G+ A+EM + +M F + V Y++ I G CK
Sbjct: 404 EMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEM-WKDMAKHNFTQNEVCYSVLIHGLCKD 462
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEM--PKRNLKP 315
G +AM ++ +M C P + ++I+G AGLV + A QL++EM + + +P
Sbjct: 463 GKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVED---ALQLYNEMLCQEPDSQP 519
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
D+ YN ++++L + ++ A++L++ M ++ D VT
Sbjct: 520 DVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558
>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Cucumis sativus]
Length = 605
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 163/358 (45%), Gaps = 14/358 (3%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+L S + +LS ++K + Y + +++M R N+LL C ++E
Sbjct: 68 SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRC----TLNILLNCLCNVNRLREG 123
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ F +L R ++PN T N L+ G ++ + M G P VVTY I G
Sbjct: 124 FAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKG 183
Query: 257 YCKKGCFGDAMRLFEEM------ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
C G A++L +EM + C P++ T ++ G V +A+QLF+EM
Sbjct: 184 LCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKT 243
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ + P I +YN++I + L+DEM ++ + D VT++ + L K +
Sbjct: 244 QGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIE 303
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
KL MIE VP T L++ FC+ ++ L+ + +G P + ++L+
Sbjct: 304 AKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLIN 363
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
G + EEA + +ML+ ++ + +Y L + + A K++D ++ ++A
Sbjct: 364 GYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG---KVDDAKKLFSVMKA 418
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/418 (23%), Positives = 173/418 (41%), Gaps = 65/418 (15%)
Query: 74 GRLFAAHSNGLKALEFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQR 131
G + A H AL FF ++ TPTP +F L LA+++++ Q + L + ++
Sbjct: 46 GNVTATH-----ALHFFHLMMRS---TPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRL 97
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQA 187
+ S +++I+L+ + E AF GI + G +N L++
Sbjct: 98 SGLSSDRC-TLNILLNCLCNVNRLREGFAAF--------AGILRRGYSPNIVTYNTLIKG 148
Query: 188 FCTQKEMKEARSVFVKL--------------------------------------LSRF- 208
C + + EA +F+++ +SR+
Sbjct: 149 LCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYE 208
Query: 209 ---APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
PN T NI++ G + G + + EM +G PS+++YN I G+C G + +
Sbjct: 209 INCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEE 268
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
+ RL +EM P + T LI + +A++L M + + PD+ YN++I
Sbjct: 269 SKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIE 328
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
DLN+A EL M K D ++Y+ + G K+ +E KLY+ M+ P
Sbjct: 329 GFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRP 388
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T L+K + +VD L+ + G + + + + GLC EA +
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 78/365 (21%), Positives = 164/365 (44%), Gaps = 15/365 (4%)
Query: 124 ELMSHVQR----THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
E+++ + R P+++T +I++ + K +E + F+ M+ + +
Sbjct: 199 EMLNDISRYEINCKPNVIT---YNIIVDGLCKVGREDEAKQLFEEMKTQGMIP----SII 251
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ FC + +E++ + ++L + P+ T N+L+ + G V + M
Sbjct: 252 SYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM 311
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G P +VTYN I+G+C G A LF M C P + + LI+G +
Sbjct: 312 IESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKV 371
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +L++EM +P++ Y++++ + ++ A +L M+ I ++ TY
Sbjct: 372 EEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIF 431
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ L KL+ + F + + L+ C +++ L+ L + G
Sbjct: 432 LDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGH 491
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ +++ G C G+ ++A ++M +Y L R ++N KLE+
Sbjct: 492 EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN---KLEE 548
Query: 479 LDRMI 483
+ +++
Sbjct: 549 VVQLL 553
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 114/250 (45%), Gaps = 36/250 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC ++ AR +FV + S+ P+ + N+L+ G+ ++ V Y+EM+
Sbjct: 323 YNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEML 382
Query: 240 LRGFRPSVVTYN-----------------------------------IRIDGYCKKGCFG 264
L G RP+V+TY+ I +DG CK C
Sbjct: 383 LVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLF 442
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+AM+LF E++ ++ + LI G + A +LF+++ +P++ Y MI
Sbjct: 443 EAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMI 502
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
R ++ A L+ +ME D +TY+T+ G +S+ LE V +L RM +
Sbjct: 503 HGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVS 562
Query: 385 PKTRTVVMLM 394
P T +++
Sbjct: 563 PDAITCSIVV 572
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 98/216 (45%), Gaps = 7/216 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S +++++ SK EE ++ ++ M + VG R ++ LL+ ++ +A+ +
Sbjct: 357 SYNVLINGYSKTLKVEEAMKLYNEM---LLVGKRP-NVITYDSLLKGIFLAGKVDDAKKL 412
Query: 201 FVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
F + + A N+ T I L G K AM++F E+ F+ + N IDG C
Sbjct: 413 FSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFT-ELKSSNFKLEIENLNCLIDGLC 471
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A LFE++ P++ T T +IHG + +A L +M PDI
Sbjct: 472 KAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDII 531
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
YN ++ L ++L+ M +K + D +T
Sbjct: 532 TYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 104/248 (41%), Gaps = 8/248 (3%)
Query: 224 ESGDVTAMEM--FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
++G+VTA F+H M+ PS+ ++N + G K + L+ +M
Sbjct: 44 KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSD 103
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
T+ L++ V + + F + +R P+I YN +I L ++ A L
Sbjct: 104 RCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFL 163
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI------EGKFVPKTRTVVMLMK 395
M++ D VTY T+ GL + + KL+ M+ E P T +++
Sbjct: 164 RMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVD 223
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C R D L+ + +G P + + L+ G C G+WEE+ +ML + Q
Sbjct: 224 GLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQP 283
Query: 456 SEASYRML 463
++ +L
Sbjct: 284 DMVTFNVL 291
>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
Length = 470
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 118/242 (48%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ + + ++ G+ G++ + EM ++G +P++ TYN I CK G DA R
Sbjct: 7 APDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAER 66
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ EM +P TTLI G + NI A +LFDEM K+ + PD AY A+I L
Sbjct: 67 VLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLC 126
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
RC + A ++ ++M + + D VTY T+ G KS +E L+++M++ P
Sbjct: 127 RCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVV 186
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L C +VD L + +G + + LV GLC G +A + ++M
Sbjct: 187 TYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEM 246
Query: 449 LV 450
V
Sbjct: 247 EV 248
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 166/371 (44%), Gaps = 10/371 (2%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISK 151
+Q P + + +L + D A ++ + Q P + + ++ K
Sbjct: 36 MQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQGIVPDTVVY---TTLIDGFCK 92
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
+ + + FD ME++ V F + + ++ C +M EA VF K+ SR P
Sbjct: 93 LGNIQAAYKLFDEMEKQRIV--PDFIA--YTAVICGLCRCGKMMEADKVFNKMFSRGVEP 148
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ T L+ G+ +SG++ +++MV G P+VVTY DG CK G A L
Sbjct: 149 DEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELL 208
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
EM ++ T +L++G NI QA +L +EM + PD + ++ + +
Sbjct: 209 HEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKT 268
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
++ A EL+ EM ++ + +T++ + G S LE +L M+E +P T T
Sbjct: 269 GEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTY 328
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
LMK +C+ + ++ + RG P + ++L+ G C +EA+ K+M
Sbjct: 329 NSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAE 388
Query: 451 RRRQVSEASYR 461
+ ++ +SY
Sbjct: 389 KGFNLTASSYN 399
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 147/331 (44%), Gaps = 8/331 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+L T S+ ++L + K E L RE+ + + L+ FC
Sbjct: 43 PNLYTYNSIILLLCKSGKVDDAERVL-------REMINQGIVPDTVVYTTLIDGFCKLGN 95
Query: 194 MKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
++ A +F ++ R P+ ++ G G + + +++M RG P VTY
Sbjct: 96 IQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTT 155
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
IDGYCK G A L +M + P++ T T L G + + A +L EM +
Sbjct: 156 LIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKG 215
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
L+ +I YN++++ L + ++ A++LM+EME + D +T+ T+ K+ +
Sbjct: 216 LQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAH 275
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+L M++ P T +LM FC++ ++ G L +++++G P+ + L+
Sbjct: 276 ELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQY 335
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C R E K M R +Y +L
Sbjct: 336 CIRNNMRCTTEIYKGMCARGVMPDSNTYNIL 366
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/328 (25%), Positives = 139/328 (42%), Gaps = 37/328 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ +C E+++ + ++ + PN T N ++L +SG V E EM+
Sbjct: 13 YSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMI 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER------------VACL-------- 279
+G P V Y IDG+CK G A +LF+EME+ V C
Sbjct: 73 NQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMM 132
Query: 280 ---------------PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
P T TTLI G + +A L ++M + L P++ Y A+
Sbjct: 133 EADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALA 192
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A EL+ EM K + + TY+++ GL KS + KL + M
Sbjct: 193 DGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMY 252
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T LM +C + L ++DRG P ++L+ G C G E+
Sbjct: 253 PDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERL 312
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQAN 471
ML + + +Y ++++Y ++ N
Sbjct: 313 LAWMLEKGIMPNTTTYNSLMKQYCIRNN 340
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 126/292 (43%), Gaps = 8/292 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
TP + L ++ D A EL+ H L + + + +++ + K + +
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELL-HEMCGKGLQLNICTYNSLVNGLCKSGNIRQA 239
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
++ + ME V + F L+ A+C EM +A + ++L R P T N+
Sbjct: 240 VKLMEEME----VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNV 295
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF SG + E M+ +G P+ TYN + YC + +++ M
Sbjct: 296 LMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARG 355
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P T LI G RN+ +A L EM ++ +YN++I + + ++ A
Sbjct: 356 VMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEAR 415
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTR 388
EL +EM + + D Y+ +F + G +E +L D IE F+ + +
Sbjct: 416 ELFEEMRREGMAADAEIYN-LFVDISYGEGNMETALELCDEAIENCFLNRIK 466
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 87/213 (40%), Gaps = 37/213 (17%)
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P + + +T+I+G L + + +L EM + LKP++ YN++I L + ++ A +
Sbjct: 8 PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ EM + I D V Y T+ G K ++ KL+D M + + VP F
Sbjct: 68 LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPD---------FI-- 116
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
A ++ GLC G+ EA + +M R + E +
Sbjct: 117 ------------------------AYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVT 152
Query: 460 YRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
Y L ++ EK L + +Q+ L P
Sbjct: 153 YTTLIDGYCKSGEMEKAFSLHNQM--VQSGLTP 183
>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
mitochondrial-like [Cucumis sativus]
Length = 1032
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 125/263 (47%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C K+++EA+ + V + + PN T + + +SG++ E ++ +M+
Sbjct: 524 YNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDML 583
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V Y I I G+C G +A+ F+ M +P ++ + +IH
Sbjct: 584 SSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTK 643
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F + K + PD+ YN++IS + D+ A +L DEM I + V Y+T+
Sbjct: 644 EAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLI 703
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +L+D + E VP T ++ +C + + L+ +I +G
Sbjct: 704 NGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGIS 763
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
P G+ +L+ G G E+A
Sbjct: 764 PDGYIYCILIDGCGKEGNLEKAL 786
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/262 (26%), Positives = 119/262 (45%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C + EA V ++ + P+ T +L+ GF + ++ + M
Sbjct: 279 YNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMP 338
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ TY IDG+ K+G +A+R+ +EM ++ T +I G +
Sbjct: 339 SSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMA 398
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF+EM L+PD YN +I ++ D+ A EL+ EM+ +++ TY +
Sbjct: 399 KAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLI 458
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL SS L+ ++ D+MI P L+K + R ++ + L +I G
Sbjct: 459 SGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVL 518
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P + L+ GLC + EEA
Sbjct: 519 PDLFCYNCLIIGLCRAKKVEEA 540
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 154/350 (44%), Gaps = 43/350 (12%)
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKT 214
E L F M E+ + IR + + ++ + + KEA VF+K L + P+
Sbjct: 609 EALSTFKCMLEKGLIPDIRAYSA-----IIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFL 663
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ GF + GD+ Y EM+ G P++V YN I+G CK G A LF+E+E
Sbjct: 664 YNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIE 723
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD------------------ 316
+P + T +T+I G N+ +A +LFDEM + + PD
Sbjct: 724 EKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLE 783
Query: 317 ----------------IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
+ A+N++I S + + A EL D+M +K++ + VTY +
Sbjct: 784 KALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILID 843
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K+ +E +L+ M +P T T +L+ + + R + ++L+ + RG
Sbjct: 844 AYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKM-ISLFKDMEARGIA 902
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
A ++ + C G+ EA + + LV ++ + + L +L +
Sbjct: 903 CDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCK 952
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 120/271 (44%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ +++A C ++ + + V ++ PN T N + G ++G V M+
Sbjct: 245 YTNVIKAHCKVGDVIKGKMVLSEMEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+G P TY + +DG+CK+ +A +FE M P+ T T LI G NI +
Sbjct: 305 KGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEE 364
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A ++ DEM R LK ++ YNAMI + + ++ AM L +EM + D TY+ +
Sbjct: 365 ALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLID 424
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G +KS + C+L M K P T +L+ C + + + +I G P
Sbjct: 425 GYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKP 484
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ L+ R+E A E K M+
Sbjct: 485 NVFMYGTLIKAYVQESRYEMAIELLKIMIAN 515
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 2/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L++ C EA S F +L + P+ + + ++ ++G + + +
Sbjct: 594 YTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFL 653
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V YN I G+CK+G A +L++EM P++ TLI+G + +
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVT 713
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LFDE+ +++L PD+ Y+ +I + +L A +L DEM K I D Y +
Sbjct: 714 KARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 773
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K LE L+ + K V L+ FC + +V L+ ++D+
Sbjct: 774 DGCGKEGNLEKALSLFHEA-QQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLT 832
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P+ +L+ EEA
Sbjct: 833 PNIVTYTILIDAYGKAEMMEEA 854
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 120/270 (44%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ F + ++EA + ++++R N T N ++ G ++G++ ++EM+
Sbjct: 349 YTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEML 408
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G P TYN+ IDGY K A L EM+ PS T + LI G ++
Sbjct: 409 MAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQ 468
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ D+M + +KP++ Y +I + ++ A+EL+ M + D Y+ +
Sbjct: 469 KANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL ++ +E L M E P T + + + + + + ++ G
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ +L+ G C G EA K ML
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCML 618
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 129/287 (44%), Gaps = 4/287 (1%)
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
++ P+ T ++ + GDV +M EM + +P++ TYN I G C+ G +
Sbjct: 236 AKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDE 294
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ + + M P T T L+ G + +A+ +F+ MP L P+ Y A+I
Sbjct: 295 ALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALID 354
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
I+ ++ A+ + DEM + + + VTY+ M G+ K+ + L++ M+ P
Sbjct: 355 GFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEP 414
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T T +L+ + + + L + R P +L++GLC ++A E
Sbjct: 415 DTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVL 474
Query: 446 KQMLVRRRQVSEASYRMLQRYLVQANANE-KLEDLDRMIKNLQAVLP 491
QM+ + + Y L + VQ + E +E L MI N VLP
Sbjct: 475 DQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIAN--GVLP 519
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 158/375 (42%), Gaps = 11/375 (2%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
+T + + N L F + KA + + L H P + ++ L ++
Sbjct: 654 KTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEML-HNGINPNIVVYNTLINGLCKLGEV 712
Query: 120 DQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+A EL ++ P ++T S ++ K + E + FD M I GI G
Sbjct: 713 TKARELFDEIEEKDLVPDVVTY---STIIDGYCKSGNLTEAFKLFDEM---ISKGISPDG 766
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +L+ + +++A S+F + + + N L+ F + G V + +
Sbjct: 767 YI-YCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDD 825
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV + P++VTY I ID Y K +A +LF +ME +P+ T T+L+ + N
Sbjct: 826 MVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGN 885
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ LF +M R + D AY M S+ + A++L+++ + I ++ +
Sbjct: 886 RFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDA 945
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ F L K + V +L M + + ++T L+ F + D + G + G
Sbjct: 946 LIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLG 1005
Query: 418 FCPHGHAL-DLLVTG 431
+ P +L D + TG
Sbjct: 1006 WVPTSLSLTDSISTG 1020
>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g02060, chloroplastic-like [Cucumis sativus]
Length = 720
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/423 (24%), Positives = 175/423 (41%), Gaps = 50/423 (11%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KAL+FF + Q +T T ++ L IL R R+ + A + +++
Sbjct: 94 KALQFFNWA-QEMGYTHTEQSYFSMLEILGRNRHLNTARNFLFSIEKR------------ 140
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
SR GI K + FN L++ F +E+ VF +
Sbjct: 141 --SR-----------------------GIVKLEARFFNSLMRNFNRAGLFQESIKVFTIM 175
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGC 262
S +P+ T N LL + G + Y EM+ G P T+NI I G+C G
Sbjct: 176 KSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEMLSTYGVTPDTFTFNILIRGFCMNGM 235
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAY 320
D R+F ++ R C P + T TL+ G + A + M K+ +L P++ Y
Sbjct: 236 VDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTY 295
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI- 379
+I R++ A+ + +EM + + +N+TY+T+ GL ++ E + + +
Sbjct: 296 TTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYNTLIKGLCEARKFEKIKDILEGTAG 355
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+G F P T T LM C +D L ++ + + P LV LC G +E
Sbjct: 356 DGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDSATYSALVRSLCQGGHYE 415
Query: 440 EAFECSKQMLVRRRQVSE-------ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
+A + ++L R+ +S A+Y + +YL + +K E R + PP
Sbjct: 416 KAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPP 475
Query: 493 PTR 495
+
Sbjct: 476 SYK 478
Score = 45.8 bits (107), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 50/223 (22%), Positives = 101/223 (45%), Gaps = 18/223 (8%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-------- 207
++ L+ F+RM E+ + + S ++ L+++ C ++A + KLL R
Sbjct: 380 DDALKVFERMS-ELKI---QPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDG 435
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR--PSVVTYNIRIDGYCKKGCFGD 265
P N + E+G E + +++ RG + PS Y I G+CK+G F
Sbjct: 436 CKPLVAAYNPIFKYLCETGKTKKAEKAFRQLMRRGTQDPPS---YKTLIMGHCKEGTFES 492
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
L M R P +T +LI+G + A Q ++M + + +P+ ++++++
Sbjct: 493 GYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILA 552
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
L+ + + L+ M +K I N+++ T L+ +G+
Sbjct: 553 KLLEQGRASESASLIQLMLDKNI-RQNLSFSTGCVRLLFGAGM 594
>gi|410109867|gb|AFV61013.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia salsoloides]
Length = 410
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 90/330 (27%), Positives = 147/330 (44%), Gaps = 17/330 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D +K L L +++YF W + + +P+ +L +I
Sbjct: 77 AIECYRLTREHKFWVPF-DTCKKVLEHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 133
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ R +F I K+G FN L+ + ++ E R
Sbjct: 134 LMHRFCK--------EGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRL 185
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+ +G P+ VT+ IDG+CK
Sbjct: 186 KSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGVTFTTLIDGHCK 245
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 246 NGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKIT 305
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I D+V Y T+ GL + K+ M+
Sbjct: 306 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREML 365
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
P T T M++ FC V G L
Sbjct: 366 SVGLKPDTGTYTMIINEFCKKGDVWTGSKL 395
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 115 FYKEILECGYPASLYFFNILMHRFCKEGEIRVARSVFDAITKWGLRPSVVSFNTLMNGYI 174
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM +K + + V
Sbjct: 175 RLGDLDEGFRLKSAMHASGVEPDVYTYSVLINGLCKESKIDGANELFDEMLDKGLVPNGV 234
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ T L+ C + NL +
Sbjct: 235 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLIYGLCKKGDLKQAQNLIDEM 294
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + Y L L Q +
Sbjct: 295 RMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRS 354
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
D ++M++ + +V L P T
Sbjct: 355 ---VDAEKMLREMLSVGLKPDT 373
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 99/257 (38%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ R+ D+ + L S H P + T S++++ + K +
Sbjct: 161 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVEPDVYTY---SVLINGLCKESKIDGA 217
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M + V G+ F L+ C + A ++ ++LS+ + + T
Sbjct: 218 NELFDEMLDKGLVPNGV------TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITY 271
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 272 NTLIYGLCKKGDLKQAQNLIDEMRMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQ 331
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P T T +I+ ++
Sbjct: 332 ENIRLDDVVYTTLISGLCQEGRSVDAEKMLREMLSVGLKPDTGTYTMIINEFCKKGDVWT 391
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 392 GSKLLKEMQRDGHVPSV 408
Score = 41.6 bits (96), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +++ A +++ ++ L+ G + G E EM+
Sbjct: 306 YTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVVYTTLISGLCQEGRSVDAEKMLREML 365
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +P TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 366 SVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVT 410
>gi|414591141|tpg|DAA41712.1| TPA: hypothetical protein ZEAMMB73_063178 [Zea mays]
Length = 374
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 115/240 (47%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN +T +L+ GF + G + A EM +M +G + + +N IDGYC+KG DA+++
Sbjct: 106 PNERTYGVLINGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKI 165
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
ME++ + T TL G V + +A+ L M + + P+ Y +IS +
Sbjct: 166 KAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCK 225
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
D+ A L EM EK VTY+ M G K + + M + FVP T
Sbjct: 226 DGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDVYT 285
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ CVN +VD+ L L+ + RG P+ A L++GL GR E AF+ ML
Sbjct: 286 YASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDML 345
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 100/200 (50%), Gaps = 5/200 (2%)
Query: 168 EIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGF 222
+I + K G E +N L C + EA+++ + + PN T L+
Sbjct: 164 KIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMIEMGVVPNYVTYTTLISIH 223
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ GD+ + EM +G PSVVTYN+ I GY KKG +A R +EME+ +P +
Sbjct: 224 CKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIREAERFRKEMEKKGFVPDV 283
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +L+HG + + A +LF+EM +R +P++ AY A+IS L + AA +L D+
Sbjct: 284 YTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDD 343
Query: 343 MEEKRIGHDNVTYHTMFFGL 362
M + + D+ Y + L
Sbjct: 344 MLKAGLIPDDSLYSALVGSL 363
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 99/226 (43%), Gaps = 1/226 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ +C + + +A + + + T N L G + + H M+
Sbjct: 146 FNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEAKTLLHIMI 205
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY I +CK G +A RLF EM PS+ T +IHG +I
Sbjct: 206 EMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHGYAKKGSIR 265
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM K+ PD+ Y +++ ++ A++L +EM+++ + V Y +
Sbjct: 266 EAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALI 325
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
GL K E +LYD M++ +P L+ + R D+
Sbjct: 326 SGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTDNRKDV 371
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 24/257 (9%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++++ G +SG V +M G + + YN +D Y ++ G + E ME
Sbjct: 18 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 77
Query: 276 VA-------------------CL-----PSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
C+ P+ +T LI+G + + A L +M +
Sbjct: 78 EGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLADMQGQ 137
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
+ + +N MI R ++ A+++ ME+ + D TY+T+ GL + + L+
Sbjct: 138 GVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVNRLDEA 197
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L MIE VP T L+ C + + L+ + ++G P ++++ G
Sbjct: 198 KTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYNVMIHG 257
Query: 432 LCSRGRWEEAFECSKQM 448
+G EA K+M
Sbjct: 258 YAKKGSIREAERFRKEM 274
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 50/242 (20%), Positives = 95/242 (39%), Gaps = 24/242 (9%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMER------VACLPSL-------------QTIT 286
S + ++ +DG CK G DA RL ++M R C SL Q I
Sbjct: 13 SPLAASVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEIL 72
Query: 287 TLIHGAGLVRNIHQAR-----QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
++ G+ + ++ DE ++P+ Y +I+ + + AA L+
Sbjct: 73 EIMENEGIEATVGDGTCGGPPKVLDECVGNGVEPNERTYGVLINGFCKIGQMEAAEMLLA 132
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M+ + +G + + ++TM G + ++ K+ M + T L C
Sbjct: 133 DMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAMEKMGVELDIYTYNTLACGLCRVN 192
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
R+D L +I+ G P+ L++ C G EA ++M + S +Y
Sbjct: 193 RLDEAKTLLHIMIEMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVVTYN 252
Query: 462 ML 463
++
Sbjct: 253 VM 254
>gi|297745567|emb|CBI40732.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 189/443 (42%), Gaps = 54/443 (12%)
Query: 28 TQSSEIERI-TRIINDHPFPDQPLHPTLLQHLPQTTP-----------LSSTLVENVLGR 75
T++S E++ TR ++ P + L +Q L L+ +V V+ R
Sbjct: 41 TENSPKEQLKTRAVDGFLSPGEKLRGVFIQRLRGKAAIELALTNVGIDLTIDIVSEVINR 100
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTH 133
+ G + FF + ++ P D + + L R ++ + +++ H+Q
Sbjct: 101 ---GNLGGEAMVIFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFVVKVLKDMHIQGIS 157
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+ TL SI++ K + + +E F +E F G K +E NVLLQ C +
Sbjct: 158 PNYETL---SIVMDSFIKARQVSKAIEMFRNLEE--FGG--KCDTESLNVLLQCLCQRSH 210
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ A F + N T NI++ G+ + G + ME MV GF P+ +T++
Sbjct: 211 VGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHL 270
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+G + G DA+ +F ME C+P+ LI R+ + + ++ M N
Sbjct: 271 IEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNC 330
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-----L 368
P++ Y +I + ++ R + A+E++DEM +G G++ ++G +
Sbjct: 331 DPNMDTYTKLIVAFLKARKVADALEMLDEM----VGR----------GMIPTTGAITSFI 376
Query: 369 EGVCKLYDRMIEGKFVPKTRTV----------VMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
E +C+ K R V ++LM+ + + LNLW + + G+
Sbjct: 377 EPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFG-KCGMLLNLWDEMQESGY 435
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
+ ++ GLC+ G+ + A
Sbjct: 436 SSDTEVYEYVINGLCNIGQLDTA 458
>gi|410109909|gb|AFV61034.1| pentatricopeptide repeat-containing protein 11, partial [Lantana
viburnoides]
Length = 431
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 156/353 (44%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTXEHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ V + IDG+C
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGXCKESKXDDANELF-DEMLVKGLVPNXVXFTTLIDGHC 258
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 259 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKI 318
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ D V Y + GL K+ M
Sbjct: 319 TYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEGRSVDAEKMLREM 378
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P RT M++ FC V G L + G P ++L+ G
Sbjct: 379 LSVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/263 (23%), Positives = 118/263 (44%), Gaps = 4/263 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ + + A EL DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 249 XFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ Y L L
Sbjct: 309 SXKGLKPDKITYTTLIDGCCKEGDLDXAFEHXKRMIQENXRLDXVXYTALISGLCXEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPTR 495
+ D ++M++ + +V L P R
Sbjct: 367 -RSVDAEKMLREMLSVGLKPDAR 388
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/324 (21%), Positives = 129/324 (39%), Gaps = 20/324 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR---------FAPNNKTMNI----------LLLG 221
+ ++ CT + + EA+S+ ++SR FA +T L+
Sbjct: 22 YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAIXETXGTQRSDJYVFSGLITA 81
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ ESG + Y F T ++ K F +EE+ S
Sbjct: 82 YLESGFLRDAIECYRLTXEHKFWVPFDTCRKVLEHLMKLKYFKLVWGFYEEILECGYPAS 141
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
L L+H +I A+ +FD + K L+P + +YN +++ IR DL+ L
Sbjct: 142 LYFFNILMHRFCKDGDIRJAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKS 201
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + D TY + G K S + +L+D M+ VP L+ C N
Sbjct: 202 AMLASGVQPDVYTYSVLINGXCKESKXDDANELFDEMLVKGLVPNXVXFTTLIDGHCKNG 261
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY- 460
RVDL + ++ ++ + P + L+ GLC +G ++A +M + + + +Y
Sbjct: 262 RVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHHLIDEMSXKGLKPDKITYT 321
Query: 461 RMLQRYLVQANANEKLEDLDRMIK 484
++ + + + E RMI+
Sbjct: 322 TLIDGCCKEGDLDXAFEHXKRMIQ 345
>gi|255660860|gb|ACU25599.1| pentatricopeptide repeat-containing protein [Petrea racemosa]
Length = 418
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E F+ T +H P D L L + +YF W + + +P+ +L +I
Sbjct: 85 AIECFRLTKKHSFRVPF-DTCRNVLEHLMKXKYFKLVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 142 LMHRFCK--------EGEMRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+ G P+ VT+ IDG+CK
Sbjct: 194 KNAMRASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++ +M P + T TLI+G ++ QAR L DEM ++ LKPD
Sbjct: 254 NGRLDLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKIT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A EL + M ++ I D+V Y + FGL + K+ M+
Sbjct: 314 YTTLIDGSCKEGDLETAFELRERMIKESIRLDDVVYTALIFGLCQEGRAVDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFC 398
P T M+M FC
Sbjct: 374 RVGLKPDDETYTMIMNEFC 392
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 136/303 (44%), Gaps = 38/303 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L+ FC + EM+ A+SVF ++++ P+ + N L+ G+ + GD+ + M
Sbjct: 139 FNILMHRFCKEGEMRLAQSVF-DAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAM 197
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G +P V TY++ I+G CK+ +A LF EM +P+ T TTLI G +
Sbjct: 198 RASGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRL 257
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A ++ +M + PD+ YN +I L + DL A L+DEM K + D +TY T+
Sbjct: 258 DLAMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQARYLLDEMSRKGLKPDKITYTTL 317
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K LE +L +RMI+ + R+D
Sbjct: 318 IDGSCKEGDLETAFELRERMIKE------------------SIRLD-------------- 345
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
L+ GLC GR +A + ++ML + + +Y M+ + +K +
Sbjct: 346 ---DVVYTALIFGLCQEGRAVDAEKMLREMLRVGLKPDDETYTMIMNEFCKKGDVKKASE 402
Query: 479 LDR 481
L R
Sbjct: 403 LLR 405
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 145/336 (43%), Gaps = 55/336 (16%)
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---YEETLEAFDRMEREI 169
+ +R+ Q++ M H TH L KS+ ++SR K + + LE +I
Sbjct: 7 STVRHTLQSYCTMIHFLCTHQMFLEAKSLIQTVVSRKGKDSASAVFAAILETKGTQRSDI 66
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF--VKLLSRFAPNNKTMNIL--LLGFKES 225
+V F+ L+ A+ +++A F K S P + N+L L+ K
Sbjct: 67 YV---------FSGLITAYLESGFIRDAIECFRLTKKHSFRVPFDTCRNVLEHLMKXKYF 117
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
V FY E++ G+ S+ +NI + +CK+G MRL
Sbjct: 118 KLVWG---FYKEILECGYPASLYFFNILMHRFCKEG----EMRL---------------- 154
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
A+ +FD + K L+P + ++N +++ I+ DL+ L + M
Sbjct: 155 ---------------AQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMRA 199
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ D TY + GL K S ++ L+ M++ VP T L+ C N R+DL
Sbjct: 200 SGVQPDVYTYSVLINGLCKESRMDEANGLFGEMLDNGLVPNGVTFTTLIDGHCKNGRLDL 259
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++++ ++++GF P + L+ GLC +G ++A
Sbjct: 260 AMDIYRQMLNQGFSPDVVTYNTLIYGLCKKGDLKQA 295
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGSCKEGDLETAFELRERMIKESIRL--DDVVYTALIFGLCQEGRAVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P TY + ++ +CKKG A L EM+R +P + T
Sbjct: 372 MLRVGLKPDDETYTMIMNEFCKKGDVKKASELLREMQRNGRVPCVVT 418
>gi|255660844|gb|ACU25591.1| pentatricopeptide repeat-containing protein [Rhaphithamnus
venustus]
Length = 418
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 98/342 (28%), Positives = 151/342 (44%), Gaps = 19/342 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+EFF+ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIEFFRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 142 LMHRFCK--------EGEMRLAQSVFDAITKWGLRPSVVSFNTLMSGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F +EM+ G P+ VT+ IDG+C
Sbjct: 194 KSAMHASGVQPDVYTYSVLINGLCKESKMDEANELF-NEMLDNGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++++ P L T TLI G ++ QAR L DEM + LKPD
Sbjct: 253 KNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMSMKELKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A E M ++ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLRGM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ P T M++ FC V G L + G P
Sbjct: 373 LSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMXRDGHVP 414
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 97/396 (24%), Positives = 167/396 (42%), Gaps = 70/396 (17%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH LL KS+ I++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPN 211
LE +I+V F+ L+ A+ +++A F L+R + P
Sbjct: 53 AAILETKGTQRSDIYV---------FSGLITAYLESGFIRDAIEFF--RLTREHKFWVPF 101
Query: 212 NKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ +L L+ K V FY E++ G+ S+ +NI + +CK+G MRL
Sbjct: 102 DTCRKVLEHLMKLKYFKLVWG---FYKEILECGYPASLYFFNILMHRFCKEG----EMRL 154
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
A+ +FD + K L+P + ++N ++S IR
Sbjct: 155 -------------------------------AQSVFDAITKWGLRPSVVSFNTLMSGYIR 183
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
DL+ L M + D TY + GL K S ++ +L++ M++ VP T
Sbjct: 184 LGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDEANELFNEMLDNGLVPNGVT 243
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L+ C N RVDL + ++ L+ +GF P + L+ GLC +G ++A + +M
Sbjct: 244 FTTLIDGHCKNGRVDLAMEIYKQLLSQGFSPDLITYNTLIFGLCKKGDLKQARDLIDEMS 303
Query: 450 VRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIK 484
++ + + +Y ++ + + E RMIK
Sbjct: 304 MKELKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK 339
>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
Length = 584
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/356 (23%), Positives = 162/356 (45%), Gaps = 18/356 (5%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLL 185
+R P ++T +I+L K Y++ ++ D M R G +NV++
Sbjct: 189 RRCVPDVVT---YTILLEATCKRSGYKQAMKLLDEM--------RDKGCTPDIVTYNVVV 237
Query: 186 QAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
C + + +A F+K L + PN + NI+L G + E EM +G
Sbjct: 238 NGICQEGRVDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 296
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+VVT+N+ I C+KG A+ + E++ + C P+ + L+H + + +A
Sbjct: 297 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMA 356
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
D M R PDI +YN ++++L R +++ A+EL+ ++++K ++Y+T+ GL
Sbjct: 357 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 416
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K+ + +L + M+ P T + C R++ + +G + D G P+
Sbjct: 417 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 476
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ GLC R A + M+ +E++Y +L L ++ DL
Sbjct: 477 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDL 532
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/383 (23%), Positives = 159/383 (41%), Gaps = 24/383 (6%)
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
L L R D+A L+ +R P T ++ I K + T EA R +
Sbjct: 74 LRSLVRRGELDEALRLVGSARR--PDAGTCAAL------IKKLSASGRTAEA-----RRV 120
Query: 170 FVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFV-KLLSRFAPNNKTMNILLLGFKESG 226
G + +N ++ +C ++ AR + + R A T + L+ G G
Sbjct: 121 LAAC---GPDVMAYNAMMAGYCGAGQVDAARRWCAERAVERDA---YTCDTLIRGLCGRG 174
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
EM+ R P VVTY I ++ CK+ + AM+L +EM C P + T
Sbjct: 175 RTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYN 234
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+++G + A + +P +P+ +YN ++ L A ELM EM +K
Sbjct: 235 VVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQK 294
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ VT++ + L + +E ++ +++ + P + + L+ FC ++D
Sbjct: 295 GCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKA 354
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
+ ++ RG P + + L+T LC G + A E Q+ + SY +
Sbjct: 355 MAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDG 414
Query: 467 LVQAN-ANEKLEDLDRMI-KNLQ 487
L +A E LE L+ M+ K LQ
Sbjct: 415 LTKAGKTKEALELLNEMVSKGLQ 437
>gi|410109949|gb|AFV61054.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
turbinata]
Length = 413
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 159/353 (45%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L ++RYF W + + +P+ +L +I
Sbjct: 73 AIECYRLTREHKLWVPF-DTCRKMLEHLMKLRYFKLVWGFYEEILECGYPA--SLYFFNI 129
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 130 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 181
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L + P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 182 KSAMLANGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLIPNGVTFTTLIDGHC 240
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM +++ M + LP L T TLI+G ++ QA L DEM + LKPD
Sbjct: 241 KNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEMSMKGLKPDKF 300
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A + M ++ I D+V Y + GL + K+ M
Sbjct: 301 TYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQSVDAEKMLREM 360
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T M++ FC V G L + G P ++L+ G
Sbjct: 361 LSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 413
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 111 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 170
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 171 RLGDLDEGFRLKSAMLANGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 230
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y RM+ +P T L+ C N + +L +
Sbjct: 231 TFTTLIDGHCKNGRVDLAMEIYKRMLSQSLLPDLITYNTLIYGLCKNGDLKQAHDLIDEM 290
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AF+ K+M+ ++ + +Y L L Q +
Sbjct: 291 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQENIRLDDVAYTALISGLCQEGQS 350
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 351 ---VDAEKMLREMLSVGLKP 367
>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 718
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 101/369 (27%), Positives = 158/369 (42%), Gaps = 5/369 (1%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
+ LLT S+ ++++ K EE L + E F + FN L+ FC
Sbjct: 222 YGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQV----TFNSLVNGFCRIG 277
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+ +A + ++ + F P+ T N L+ G + G+ +M+LR P+ VTYN
Sbjct: 278 NVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYN 337
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I CK+ A L + LP + T TLI G L +N A ++F+EM +
Sbjct: 338 TLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNK 397
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
KPD Y+ +I SL R L A+ L+ EME + V Y+T+ GL KS +E
Sbjct: 398 GCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDA 457
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+++D+M + T L+ C N RV+ L +I G P + L+T
Sbjct: 458 EEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTY 517
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
C G E+A + + M + +Y L L +A + L R ++ VL
Sbjct: 518 FCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLT 577
Query: 492 PPTRQQVAQ 500
P V Q
Sbjct: 578 PHAYNPVIQ 586
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 145/304 (47%), Gaps = 2/304 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FNVL++A C +++ A + ++ + P+ T L+ GF E GD+ +M+
Sbjct: 161 FNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQML 220
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + V+ + ++G+CK+G +A+R E+ P T +L++G + N++
Sbjct: 221 GYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVN 280
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + D M ++ PD+ YN++IS + + + A+E++ +M + + VTY+T+
Sbjct: 281 DALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLI 340
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +E L ++ +P T L++ C++ D+ + ++ + ++G
Sbjct: 341 SALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCK 400
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P +L+ LC R +EA K+M + Y L L ++ E E++
Sbjct: 401 PDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEI 460
Query: 480 -DRM 482
D+M
Sbjct: 461 FDQM 464
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 180/409 (44%), Gaps = 18/409 (4%)
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLS 147
F + F+P F ++ R+ + A +++ + + P + T S+ +S
Sbjct: 250 FVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSL---IS 306
Query: 148 RISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ K +E+ +E +M RE + +N L+ A C + E++ A + L+S
Sbjct: 307 GMCKLGEFEKAIEILQQMILREC-----SPNTVTYNTLISALCKENEIEAATDLARILVS 361
Query: 207 R-FAPNNKTMNILLLGF--KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ P+ T N L+ G ++ D+ AMEMF EM +G +P TY+I ID C +
Sbjct: 362 KGLLPDVCTFNTLIQGLCLSKNQDI-AMEMF-EEMKNKGCKPDEFTYSILIDSLCYERRL 419
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ L +EME C + TLI G R I A ++FD+M + YN +
Sbjct: 420 KEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTL 479
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + + + A +LMD+M + + D TY+++ + +E + M
Sbjct: 480 IDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGC 539
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T L+ C RVD+ L + +G HA + ++ L R R +E
Sbjct: 540 EPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMR 599
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ-AVLP 491
++M+ + +++++ R L + E +D ++ L+ +LP
Sbjct: 600 LFREMMEKSDPPDALTHKIVFRGLCNGGGPIQ-EAIDFTVEMLEKGILP 647
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 140/308 (45%), Gaps = 8/308 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+Q F + ++ A + ++L N ++ +L+ GF + G V F E+
Sbjct: 196 FTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVS 255
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P VT+N ++G+C+ G DA+ + + M P + T +LI G +
Sbjct: 256 EEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFE 315
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ +M R P+ YN +IS+L + ++ AA +L + K + D T++T+
Sbjct: 316 KAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLI 375
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL S + ++++ M P T +L+ C R+ L L + G
Sbjct: 376 QGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCA 435
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED- 478
+ + L+ GLC R E+A E QM + S +Y L L + N+++E+
Sbjct: 436 RNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCK---NKRVEEA 492
Query: 479 ---LDRMI 483
+D+MI
Sbjct: 493 SQLMDQMI 500
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/380 (20%), Positives = 164/380 (43%), Gaps = 16/380 (4%)
Query: 93 TLQHPHFTPTPDAF--------EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
T + P TP + E L L + FD L+ ++ + ++ + +
Sbjct: 37 TFKFPTLCTTPSSTTHHPLPPNETLLLQLTQSSSFDSITTLLKQLKSSG----SIPNATT 92
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ I F ++ E +E E+ K + +N+ L A ++K + K+
Sbjct: 93 FATLIQSFTNFHEIENLLKILENELGF---KPDTNFYNIALNALVEDNKLKLVEMLHSKM 149
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++ + T N+L+ ++ + + EM G +P +T+ + G+ ++G
Sbjct: 150 VNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDL 209
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+++ ++M CL + ++ L++G + +A + E+ + PD +N++
Sbjct: 210 NGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSL 269
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
++ R ++N A++++D M EK D TY+++ G+ K E ++ +MI +
Sbjct: 270 VNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILREC 329
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T T L+ C ++ +L L+ +G P + L+ GLC + A E
Sbjct: 330 SPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAME 389
Query: 444 CSKQMLVRRRQVSEASYRML 463
++M + + E +Y +L
Sbjct: 390 MFEEMKNKGCKPDEFTYSIL 409
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 5/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEMV 239
+++L+ + C ++ +KEA + ++ S N + N L+ G +S + E + +M
Sbjct: 406 YSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQME 465
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G S VTYN IDG CK +A +L ++M P T +L+ V +I
Sbjct: 466 LLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIE 525
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + M +PDI Y +I L R ++ A +L+ ++ K I Y+ +
Sbjct: 526 KAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVI 585
Query: 360 FGL-MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR-VDLGLNLWGYLIDRG 417
L M+ EG+ +L+ M+E P T ++ + C + ++ ++++G
Sbjct: 586 QALFMRKRTKEGM-RLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKG 644
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P + L GLCS + E M++ + Q+SE M++ +L N+ L
Sbjct: 645 ILPEFPSFGFLAEGLCSLSMEDTLIELI-NMVMEKAQMSERETSMIRGFLKIRKFNDALA 703
Query: 478 DLDRMI 483
+L ++
Sbjct: 704 NLGGIL 709
>gi|222631252|gb|EEE63384.1| hypothetical protein OsJ_18196 [Oryza sativa Japonica Group]
Length = 378
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 145/309 (46%), Gaps = 1/309 (0%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
G E FN LL A + +EA VF ++ R+AP+ ++ L+L + + ++ ++
Sbjct: 35 GVESFNCLLVALAQEGLGREANQVFDRMRDRYAPDLRSYTALMLAWCNARNLVEAGRVWN 94
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ G +P VV +N I+G + +A+++FE M+ P++ T T LI
Sbjct: 95 EMLENGLKPDVVVHNTMIEGLLRGQRRPEAVKMFELMKAKGPAPNVWTYTMLIRDHCKRG 154
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ A + F+EM +PD+ Y ++ + ++ L++EM +K D TY+
Sbjct: 155 KMDMAMRCFEEMQDVGCQPDVATYTCLLVGYGNAKRMDRVTALLEEMTQKGCPPDGRTYN 214
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-FFCVNFRVDLGLNLWGYLID 415
+ L + + ++Y +MI+ P T M+MK +F +G +W +
Sbjct: 215 ALIKLLTNRNMPDDAARIYKKMIKKGLEPTIHTYNMMMKSYFLGGRNYMMGCAVWEEMHR 274
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G CP ++ + + G GR EEA + ++M+ + + + Y +A +
Sbjct: 275 KGICPDVNSYTVFINGHIRHGRPEEACKYIEEMIQKGMKTPQIDYNKFAADFSKAGKPDI 334
Query: 476 LEDLDRMIK 484
L +L + +K
Sbjct: 335 LYELAQKVK 343
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 116/250 (46%), Gaps = 3/250 (1%)
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ER 275
I + F +G++ + M GF V ++N + ++G +A ++F+ M +R
Sbjct: 6 IAIKSFAAAGEIKNAVGVFEMMRTHGFDDGVESFNCLLVALAQEGLGREANQVFDRMRDR 65
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
A P L++ T L+ RN+ +A ++++EM + LKPD+ +N MI L+R +
Sbjct: 66 YA--PDLRSYTALMLAWCNARNLVEAGRVWNEMLENGLKPDVVVHNTMIEGLLRGQRRPE 123
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+++ + M+ K + TY + K ++ + ++ M + P T L+
Sbjct: 124 AVKMFELMKAKGPAPNVWTYTMLIRDHCKRGKMDMAMRCFEEMQDVGCQPDVATYTCLLV 183
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+ R+D L + +G P G + L+ L +R ++A K+M+ + +
Sbjct: 184 GYGNAKRMDRVTALLEEMTQKGCPPDGRTYNALIKLLTNRNMPDDAARIYKKMIKKGLEP 243
Query: 456 SEASYRMLQR 465
+ +Y M+ +
Sbjct: 244 TIHTYNMMMK 253
>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
mitochondrial-like [Glycine max]
Length = 794
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 158/340 (46%), Gaps = 5/340 (1%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++ + K+Q E F M + GI ++ L+ FC ++KEA +
Sbjct: 451 STIIDALCKYQLVSEAYGLFSEMTVK---GISA-DVVTYSTLIYGFCIVGKLKEAIGLLN 506
Query: 203 KL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ L P+ +T IL+ + G V + M+ +P V TYN ++GY
Sbjct: 507 EMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVY 566
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A +F M + P + T T LI+G + + +A LF EM ++N+ PD Y+
Sbjct: 567 EVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYS 626
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+++ L + ++ +L+DEM ++ D +TY+++ GL K+ L+ L+++M +
Sbjct: 627 SLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQ 686
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T T +L+ C R+ ++ L+ +G+ + ++++ G C +G EEA
Sbjct: 687 GIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEA 746
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+M + ++ ++ L + + N+K E L R
Sbjct: 747 LTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLR 786
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 95/383 (24%), Positives = 164/383 (42%), Gaps = 14/383 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH---VQRTHPSLLTLKS 141
KAL FK + F P F K L A+M+++ A L SH ++ P L TL
Sbjct: 291 KALNLFK-EMILSRFPPIIQ-FNKILDSFAKMKHYSTAVSL-SHRLELKGIQPDLFTLNI 347
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ I+ F + F + + + G + N L++ C + ++K+A
Sbjct: 348 L------INCFCHMGQITFGFSVLAKILKRGYPP-STVTLNTLIKGLCLKGQVKKALHFH 400
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
KLL++ F N + L+ G + GD ++ R +P+V Y+ ID CK
Sbjct: 401 DKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKY 460
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+A LF EM + T +TLI+G +V + +A L +EM + + PD+ Y
Sbjct: 461 QLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTY 520
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ +L + + A ++ M + + D TY+T+ G + ++ +++ M
Sbjct: 521 TILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSL 580
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T +L+ FC + VD LNL+ + + P LV GLC GR
Sbjct: 581 MGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISY 640
Query: 441 AFECSKQMLVRRRQVSEASYRML 463
++ +M R + +Y L
Sbjct: 641 VWDLIDEMRDRGQPADVITYNSL 663
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 164/382 (42%), Gaps = 9/382 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH-VQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
TP ++ ++ +++ D+A L + P ++ + L +K + Y
Sbjct: 270 TPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKI---LDSFAKMKHYSTA 326
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ R+E + GI+ N+L+ FC ++ SV K+L R + P+ T+N
Sbjct: 327 VSLSHRLELK---GIQP-DLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNT 382
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G G V F+ +++ +GF+ + V+Y I+G CK G A++L +++
Sbjct: 383 LIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRL 442
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P+++ +T+I + + +A LF EM + + D+ Y+ +I L A+
Sbjct: 443 TKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAI 502
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L++EM K I D TY + L K ++ + M++ P T LM +
Sbjct: 503 GLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGY 562
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
+ + V +++ + G P H +L+ G C +EA K+M +
Sbjct: 563 LLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDT 622
Query: 458 ASYRMLQRYLVQANANEKLEDL 479
+Y L L ++ + DL
Sbjct: 623 VTYSSLVDGLCKSGRISYVWDL 644
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/353 (22%), Positives = 144/353 (40%), Gaps = 70/353 (19%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N L++ C + ++KEA KLL++ F N + L+ G GD A F ++
Sbjct: 66 LNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKID 125
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R +P+V YN ID CK +A LF EM ++ T +TLI+G +V +
Sbjct: 126 GRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLK 185
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L + M + + P++ YN ++ +L + + A ++ M + + + +TY T+
Sbjct: 186 EALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLM 245
Query: 360 ---------------FGLMKSSG-----------LEGVCK---------LYDRMIEGKFV 384
F M G + G CK L+ MI +F
Sbjct: 246 DGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFP 305
Query: 385 PKTR----------------------------------TVVMLMKFFCVNFRVDLGLNLW 410
P + T+ +L+ FC ++ G ++
Sbjct: 306 PIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVL 365
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ RG+ P L+ L+ GLC +G+ ++A ++L + Q+++ SY L
Sbjct: 366 AKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATL 418
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 118/255 (46%), Gaps = 1/255 (0%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
SV K+L R + P+ T+N L+ G G V F+ +++ +GF+ + V+Y I+G
Sbjct: 49 SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G A++ +++ P+++ T+I + + +A LF EM + + ++
Sbjct: 109 CRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANV 168
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y+ +I L A+ L++ M K I + TY+ + L K ++ +
Sbjct: 169 VTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAV 228
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M++ T LM + + + V +++ + G P H+ ++++ G C R
Sbjct: 229 MLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKR 288
Query: 438 WEEAFECSKQMLVRR 452
++A K+M++ R
Sbjct: 289 VDKALNLFKEMILSR 303
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 1/200 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ FC K + EA ++F ++ + P+ T + L+ G +SG ++ + EM
Sbjct: 590 YTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMR 649
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG V+TYN IDG CK G A+ LF +M+ P+ T T L+ G +
Sbjct: 650 DRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLK 709
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+++F ++ + D+ YN MI + L A+ ++ +MEE + VT+ +
Sbjct: 710 DAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIII 769
Query: 360 FGLMKSSGLEGVCKLYDRMI 379
L K + KL +MI
Sbjct: 770 NALFKKDENDKAEKLLRQMI 789
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 95/218 (43%), Gaps = 14/218 (6%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPD T+ I + + D+A L H + P +T S+ L + + +
Sbjct: 584 TPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWD 643
Query: 158 TLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
++ DR + + +N L+ C + +A ++F K+ + PN T
Sbjct: 644 LIDEMRDRGQPADVI--------TYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTF 695
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
ILL G + G + + + +++ +G+ V YN+ I G+CK+G +A+ + +ME
Sbjct: 696 TILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEE 755
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C+P+ T +I+ +A +L +M R L
Sbjct: 756 NGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793
>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
Length = 1023
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/325 (28%), Positives = 141/325 (43%), Gaps = 4/325 (1%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNIL 218
+ FD + V + FG F+ L + +EA F K+ R P ++ N L
Sbjct: 47 DVFDVLWSTRNVCVPGFGV--FDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGL 104
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L F G M+ F+ +M+ G +P+V TYNI ID CK+G A LFEEM+
Sbjct: 105 LHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGL 164
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+P T ++I G G V + F+EM + +PD+ YN +I+ + L +E
Sbjct: 165 IPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLE 224
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
EM++ + + V+Y T+ K ++ K Y M VP T L+ +C
Sbjct: 225 FFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYC 284
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+ L + G + L+ GLC R +EA E +M+ + A
Sbjct: 285 KIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLA 344
Query: 459 SYRMLQRYLVQA-NANEKLEDLDRM 482
SY L V+A N + LE LD M
Sbjct: 345 SYTALIHGFVKAKNMDRALELLDEM 369
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 98/368 (26%), Positives = 160/368 (43%), Gaps = 14/368 (3%)
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
YF + + MS P ++T ++ ++ KF + LE F M++ K
Sbjct: 189 YFFEEMKSMS----CEPDVITYNTL---INCFCKFGKLPKGLEFFREMKQSGL----KPN 237
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
++ L+ AFC + M++A +V + PN T L+ + + G+++
Sbjct: 238 VVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLAD 297
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM G +VVTY IDG C +A LF +M +P+L + T LIHG +
Sbjct: 298 EMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAK 357
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ +A +L DEM R +KPD+ Y I SL + AA +M+EM+EK I + Y
Sbjct: 358 NMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYT 417
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI-D 415
T+ KS L + M+E T +L+ C N V ++ +G + D
Sbjct: 418 TLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISND 477
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANE 474
G + ++ GLC + E A +QM + +Y ++ L Q N +
Sbjct: 478 FGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQ 537
Query: 475 KLEDLDRM 482
L D+M
Sbjct: 538 ALALRDKM 545
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/349 (21%), Positives = 150/349 (42%), Gaps = 20/349 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
P F+ +L F++A + S ++R P + + +R+ K
Sbjct: 61 PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGK------- 113
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ R +++ K +N+++ C + +++ A +F ++ R P+ T N
Sbjct: 114 TDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNS 173
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G+ + G + F+ EM P V+TYN I+ +CK G + F EM++
Sbjct: 174 MIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSG 233
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ + +TL+ + QA + + +M + L P+ Y +++ + + +L+ A
Sbjct: 234 LKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAF 293
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L DEM + + + VTY + GL ++ +L+ +M+ +P + L+ F
Sbjct: 294 RLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGF 353
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG-----LCSRGRWEEA 441
+D L L + RG P DLL+ G LC + E A
Sbjct: 354 VKAKNMDRALELLDEMKGRGIKP-----DLLLYGTFIWSLCGLEKIEAA 397
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/211 (22%), Positives = 93/211 (44%), Gaps = 8/211 (3%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
L S + ++ K ++ + LE D M+ R I + +G+ + + C ++++
Sbjct: 342 NLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT-----FIWSLCGLEKIEA 396
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A+ V ++ + N L+ + +S + + EM+ + VT+ + ID
Sbjct: 397 AKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLID 456
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTI-TTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G CK A+ F + L + I T +I G + A LF++M ++ L
Sbjct: 457 GLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLV 516
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
PD AY ++I ++ ++ A+ L D+M E
Sbjct: 517 PDRTAYTSLIDGKLKQGNVVQALALRDKMAE 547
>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 621
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 144/314 (45%), Gaps = 4/314 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL A + +EA+ +F +L +++ P+ + + L+ +G A EM
Sbjct: 12 YNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEMQ 71
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P++ TYN +D K G F +A+RL EM C+P ++T LI G +
Sbjct: 72 AKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLS 131
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF EM +R PD YN++I L + AMEL++EME D +TY ++
Sbjct: 132 EAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLI 191
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K KL+ M P + T LM RVD L L + +RG
Sbjct: 192 TGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVK 251
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ G G EA+ +M + +Y L L++A+ +L++
Sbjct: 252 PGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKAS---QLDEA 308
Query: 480 DRMIKNLQAVLPPP 493
+++K ++ PP
Sbjct: 309 CQVLKKMEKEGCPP 322
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/409 (23%), Positives = 171/409 (41%), Gaps = 23/409 (5%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
+KA + F+ ++ P F + L + D A EL+ ++ P ++T +
Sbjct: 201 VKAFKLFQ-EMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNA 259
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA 197
+ I+ F + +EA++ ++ +++ G + ++ L+ ++ EA
Sbjct: 260 L------IAGFGKVGDLVEAYNLLDE-----MKRNGCKPDVVTYSCLITGLIKASQLDEA 308
Query: 198 RSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
V K+ P + T N L+ G ++G + + M +G P VVTY+ I
Sbjct: 309 CQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITA 368
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
K A LFEEME V P L T ++I G + A +LF EM + L PD
Sbjct: 369 LGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPD 428
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ YNA ++SL R A ++ ++M+E + D TY + GL K+ ++ C L
Sbjct: 429 VITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLK 488
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+IE + ++ VD L + +G P + + L+ L G
Sbjct: 489 ELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAG 548
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEKLEDLDR 481
R EAF + + + + SY L L Q A E LE++ +
Sbjct: 549 RVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSK 597
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 169/381 (44%), Gaps = 15/381 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S + + N LGR + ALE +Q P + + L + FD+A
Sbjct: 45 VSYSCLINSLGRAGKWEA----ALEVVA-EMQAKGCKPNLWTYNTLVDCLGKAGQFDEAL 99
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFN 182
L++ + R + + +++ + ++S + K E F M ER + S +
Sbjct: 100 RLLAEM-RDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYG 158
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
L + +QK M+ ++ + R P+ T + L+ G + G+ + EM
Sbjct: 159 -LGKVGRSQKAME-----LLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKR 212
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +P +T+ +D K G DA+ L +EM+ P + T LI G G V ++ +
Sbjct: 213 RGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVE 272
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L DEM + KPD+ Y+ +I+ LI+ L+ A +++ +ME++ D +TY+T+
Sbjct: 273 AYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLIN 332
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K+ L +L+DRM P T L+ RV+ L+ + G P
Sbjct: 333 GLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQP 392
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
++T L G+ ++A
Sbjct: 393 DLFTYCSIITVLGKAGQVDDA 413
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/179 (21%), Positives = 80/179 (44%), Gaps = 1/179 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L + KEAR +F + S P+ T + LLLG ++ +V E++
Sbjct: 432 YNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELI 491
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + ++ ++ G +A L + P + LI +
Sbjct: 492 EQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVS 551
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +++ ++ KPDI +Y+++IS+L + ++ A EL++EM ++ + +Y +
Sbjct: 552 EAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNL 610
>gi|242052075|ref|XP_002455183.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
gi|241927158|gb|EES00303.1| hypothetical protein SORBIDRAFT_03g005716 [Sorghum bicolor]
Length = 892
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/202 (31%), Positives = 102/202 (50%)
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
E + M RG P+ VTY I I CK+G DA+ +F+ M ++ +LI+G
Sbjct: 355 ERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSLING 414
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
N HQAR L +EM ++ L P +Y+ +I+ L R DL +AMEL EM + +
Sbjct: 415 YCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGN 474
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
T+ T+ G K ++ +L+D+MI+ VP T ++++ +C V L+
Sbjct: 475 VYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYD 534
Query: 412 YLIDRGFCPHGHALDLLVTGLC 433
++DRG P + L++ LC
Sbjct: 535 QMVDRGLTPDNYTYRSLISVLC 556
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/381 (25%), Positives = 163/381 (42%), Gaps = 44/381 (11%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ +I++ + K ++ L FDRM + GIR +N L+ +C +AR +
Sbjct: 372 TYAILIHSLCKRGMMDDALCMFDRMREK---GIR-VTVYPYNSLINGYCQHDNFHQARGL 427
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+++ + AP+ + + L+ G GD+ + + EM G +V T+ I G+CK
Sbjct: 428 LNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSGNVYTFTTLISGFCK 487
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A RLF++M + +P+ T +I G V N+ +A QL+D+M R L PD
Sbjct: 488 DGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYT 547
Query: 320 YNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
Y ++IS L C L A A E +D++E + ++ + T+ +G K L ++D
Sbjct: 548 YRSLISVL--CLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDE 605
Query: 378 M----IEGKFVPKTRTVVMLMKF-----FCVNFR-----------------VDL------ 405
M ++ + T V +K V FR +D+
Sbjct: 606 MRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEEN 665
Query: 406 ---GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
LN W +I G P+ +L+ LC G A ++MLV R + +Y
Sbjct: 666 IVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNC 725
Query: 463 LQRYLVQANANEKLEDLDRMI 483
+L EK + L I
Sbjct: 726 FLDFLANEGELEKAKVLHATI 746
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/331 (24%), Positives = 145/331 (43%), Gaps = 26/331 (7%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSY 155
HF P+ + + L + + D+A+ L H+ P+L ++ L + +F+
Sbjct: 295 HFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREA 354
Query: 156 EETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR---- 207
E +F G+ G E + +L+ + C + M +A +F ++ +
Sbjct: 355 ER-----------LFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
P N +N G+ + + +EMV +G PS +Y+ I G C+KG A
Sbjct: 404 TVYPYNSLIN----GYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASA 459
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
M L EM R ++ T TTLI G N+ +A +LFD+M ++ P+ +N MI
Sbjct: 460 MELHREMARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEG 519
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
R ++ A +L D+M ++ + DN TY ++ L + G + D + V
Sbjct: 520 YCRVGNVRKAFQLYDQMVDRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLN 579
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ ++ LM FC R+ ++W + RG
Sbjct: 580 SFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 134/356 (37%), Gaps = 70/356 (19%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC M EA +F K++ S PN T N+++ G+ G+V Y +MV
Sbjct: 478 FTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQLYDQMV 537
Query: 240 LRGFRPSVVTYNIRID-----------------------------------GYCKKGCFG 264
RG P TY I G+CK+G
Sbjct: 538 DRGLTPDNYTYRSLISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLT 597
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+ +++EM L + T +++ A + + + LF EM ++ +KPD + MI
Sbjct: 598 ETYHIWDEMRARGVKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMI 657
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ ++ A+ D+M + VTY + L KS L L + M+ G+F+
Sbjct: 658 DVHSKEENIVQALNCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFL 717
Query: 385 P----------------------------------KTRTVVMLMKFFCVNFRVDLGLNLW 410
P T T L+K FC ++ ++L
Sbjct: 718 PNSFTYNCFLDFLANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLM 777
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
+ GF P + ++ LC G +AF+ +ML + + +Y +L R+
Sbjct: 778 QNNTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRW 833
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 130/306 (42%), Gaps = 4/306 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+NVL+ C + EA V ++ R + T L+ GF + ++ A+EM +M
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEM-TDDM 291
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ F PSV + + +DG K+G A RL + + +P+L LI R
Sbjct: 292 LSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRF 351
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +LF M R L+P+ Y +I SL + ++ A+ + D M EK I Y+++
Sbjct: 352 REAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRVTVYPYNSL 411
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + L + M+E P + L+ C + + L + G
Sbjct: 412 INGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELHREMARNGV 471
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
+ + L++G C G +EA +M+ +E ++ M++ Y N + +
Sbjct: 472 SGNVYTFTTLISGFCKDGNMDEAARLFDKMIDSSVVPNEVTFNVMIEGYCRVGNVRKAFQ 531
Query: 478 DLDRMI 483
D+M+
Sbjct: 532 LYDQMV 537
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F A LF+EM + T I +RN+ AR L M + +K YN
Sbjct: 176 FALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVPYNV 235
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ L R + A+E+ + M E+ I D VTY T+ +G ++ LE ++ D M+
Sbjct: 236 LMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDMLSLH 295
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
FVP + ++ +D L +L + G P+ A + L+ LC R+ EA
Sbjct: 296 FVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALIDKLCKDRRFREAE 355
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRM 482
+ M R + +E +Y +L L + ++ L DRM
Sbjct: 356 RLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRM 396
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/421 (18%), Positives = 152/421 (36%), Gaps = 75/421 (17%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ ++ + L R A EL + R S + + + ++S K + +E
Sbjct: 436 LAPSAASYSPLIAGLCRKGDLASAMELHREMARNGVSG-NVYTFTTLISGFCKDGNMDEA 494
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT--- 214
FD+M V FNV+++ +C +++A ++ +++ R P+N T
Sbjct: 495 ARLFDKMIDSSVVP----NEVTFNVMIEGYCRVGNVRKAFQLYDQMVDRGLTPDNYTYRS 550
Query: 215 --------------------------------MNILLLGFKESGDVTAMEMFYHEMVLRG 242
+ L+ GF + G +T + EM RG
Sbjct: 551 LISVLCLTLGAMKAKEFVDDLENNCVVLNSFSLTTLMYGFCKEGRLTETYHIWDEMRARG 610
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ ++++ + + K LF EM+ P T +I NI QA
Sbjct: 611 VKLDLISFTVIVYAALKLHDGEKISVLFREMKEKGVKPDNVFHTCMIDVHSKEENIVQAL 670
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM------------------- 343
+D+M P++ Y +I+ L + L++A L +EM
Sbjct: 671 NCWDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNSFTYNCFLDFL 730
Query: 344 ------EEKRIGH---------DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
E+ ++ H + VT++T+ G K+ ++G L E F P
Sbjct: 731 ANEGELEKAKVLHATILEGCLANTVTFNTLIKGFCKAGQIQGAIDLMQNNTESGFFPDCI 790
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ ++ C ++ LW ++ +G P A ++L+ G +++ M
Sbjct: 791 SYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGEFDKGLGIYSDM 850
Query: 449 L 449
+
Sbjct: 851 V 851
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+R AR LFDEM + D Y A I + R+L+ A L+ ME K + V
Sbjct: 173 IRQFALARDLFDEMVQCKFPLDEYVYTAGIRAYCEIRNLDGARGLLTRMESKGVKGSAVP 232
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + +GL +++ + ++ + M+E V T L+ FC +++ L + ++
Sbjct: 233 YNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEMALEMTDDML 292
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P + +V GL RG ++AF
Sbjct: 293 SLHFVPSVASCSFMVDGLRKRGHIDKAF 320
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/289 (20%), Positives = 115/289 (39%), Gaps = 42/289 (14%)
Query: 241 RGFRPSVVTYNIRIDGYCK----------------KGCFGD------------------- 265
+G + S V YN+ + G C+ +G D
Sbjct: 224 KGVKGSAVPYNVLMYGLCRNNRVLEAVEVKNSMVERGIVADEVTYRTLVYGFCRTEELEM 283
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ + ++M + +PS+ + + ++ G +I +A +L + + + P++ A NA+I
Sbjct: 284 ALEMTDDMLSLHFVPSVASCSFMVDGLRKRGHIDKAFRLACHLGELGMVPNLFACNALID 343
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
L + R A L M + + + VTY + L K ++ ++DRM E
Sbjct: 344 KLCKDRRFREAERLFRGMANRGLEPNEVTYAILIHSLCKRGMMDDALCMFDRMREKGIRV 403
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
L+ +C + L ++++G P + L+ GLC +G A E
Sbjct: 404 TVYPYNSLINGYCQHDNFHQARGLLNEMVEKGLAPSAASYSPLIAGLCRKGDLASAMELH 463
Query: 446 KQMLVRRRQVSEASY---RMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
++M R VS Y ++ + N +E D+MI + +V+P
Sbjct: 464 REM--ARNGVSGNVYTFTTLISGFCKDGNMDEAARLFDKMIDS--SVVP 508
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 84/193 (43%), Gaps = 2/193 (1%)
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
KE V A+ + +M+ G P+VVTY + I+ CK G A L EEM LP+
Sbjct: 662 KEENIVQALNC-WDKMIADGCSPNVVTYTVLINHLCKSGYLSSAQILCEEMLVGRFLPNS 720
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T + + +A+ L + + L + +N +I + + A++LM
Sbjct: 721 FTYNCFLDFLANEGELEKAKVLHATILEGCLANTV-TFNTLIKGFCKAGQIQGAIDLMQN 779
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
E D ++Y T+ L K + +L++ M+ P +L+++ ++
Sbjct: 780 NTESGFFPDCISYSTIINELCKVGDINKAFQLWNEMLYKGLKPDIVAYNILIRWCNIHGE 839
Query: 403 VDLGLNLWGYLID 415
D GL ++ +++
Sbjct: 840 FDKGLGIYSDMVN 852
>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 907
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 92/338 (27%), Positives = 155/338 (45%), Gaps = 31/338 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYE 156
F+P+ A + L + ++A L+ V P++ ++ + + K ++++
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNAL---IDSLCKGRNFD 384
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
E FDRM + +G+ +++L+ FC + ++ A S +++ P+
Sbjct: 385 EAELLFDRMGK---IGLCP-NDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPY 440
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + GD++A E EM+ + P+VVTY + GYC KG A+RL+ EM
Sbjct: 441 NSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTG 500
Query: 276 VACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+PS+ T TTL+ G AGL+R+ A +LF EM + N+KP+ YN MI +
Sbjct: 501 KGIVPSIYTFTTLLSGLFRAGLIRD---AVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGN 557
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A E ++EM EK I D +Y + GL + D + +G
Sbjct: 558 MSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTG 617
Query: 393 LMKFFCVNFR---------------VDLGLNLWGYLID 415
L+ FC + VDL L +G LID
Sbjct: 618 LLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/301 (25%), Positives = 136/301 (45%), Gaps = 11/301 (3%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV--LLQAFCTQKEMKEARSVFV 202
++ + K Q +E LE D M R +F E V L++ + +++EA ++ V
Sbjct: 303 LVCGLCKVQEFEVGLEMIDEMLR------LRFSPSEAAVSSLVEGLRKRGKVEEALNL-V 355
Query: 203 KLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
K ++ F +PN N L+ + + E+ + M G P+ VTY+I ID +C++
Sbjct: 356 KRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRR 415
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ EM + PS+ +LI+G +I A L EM + L+P + Y
Sbjct: 416 GKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTY 475
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+++ +N A+ L EM K I T+ T+ GL ++ + KL+ M E
Sbjct: 476 TSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAE 535
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T ++++ +C + +I++G P ++ L+ GLC G+ E
Sbjct: 536 WNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASE 595
Query: 441 A 441
A
Sbjct: 596 A 596
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 168/398 (42%), Gaps = 44/398 (11%)
Query: 132 THPSLL-TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
T SLL ++++S +L + KF+ + +E FD M I VGIR + ++++ C
Sbjct: 184 TKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDM---INVGIRP-DVYIYTGVIRSLCE 239
Query: 191 QKEMKEARSVFVKLLSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
K++ A+ + V++ + N N+L+ G + V ++ + +P VVT
Sbjct: 240 LKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVT 299
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA---GLV----------- 295
Y + G CK F + + +EM R+ PS +++L+ G G V
Sbjct: 300 YCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVA 359
Query: 296 ---------------------RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
RN +A LFD M K L P+ Y+ +I R L+
Sbjct: 360 EFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLD 419
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+ + EM + + Y+++ G K + L MI K P T LM
Sbjct: 420 TALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLM 479
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C +++ L L+ + +G P + L++GL G +A + +M +
Sbjct: 480 GGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVK 539
Query: 455 VSEASYR-MLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+ +Y M++ Y + N ++ E L+ MI+ + ++P
Sbjct: 540 PNRVTYNVMIEGYCEEGNMSKAFEFLNEMIE--KGIVP 575
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 124/291 (42%), Gaps = 8/291 (2%)
Query: 166 EREIFVGIRKFGSEEFN-----VLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILL 219
E ++FV G+ E N LL FC + +++EA SV + R + +L+
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G + D EM RG +P V Y ID K G F +A +++ M C+
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCV 714
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR-CRDLNAAME 338
P+ T T +I+G +++A L +M N P+ Y + L + D+ A+E
Sbjct: 715 PNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVE 774
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L + + K + + TY+ + G + +E +L RMI P T ++ C
Sbjct: 775 LHNAIL-KGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELC 833
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
V + LW + ++G P A + L+ G C G +A E +ML
Sbjct: 834 RRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEML 884
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 119/283 (42%), Gaps = 32/283 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C++ ++ +A ++ ++ + P+ T LL G +G + + EM
Sbjct: 475 YTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMA 534
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P+ VTYN+ I+GYC++G A EM +P + LIHG L
Sbjct: 535 EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQAS 594
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM- 358
+A+ D + K N + + Y ++ R L A+ + +M + + D V Y +
Sbjct: 595 EAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLI 654
Query: 359 -----------FFGLMK---SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
F GL+K GL+ +Y MI+ K KT +F+
Sbjct: 655 DGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAK--SKTG-----------DFKEA 701
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA-FECSK 446
G +W +I+ G P+ ++ GLC G EA CSK
Sbjct: 702 FG--IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSK 742
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 133/311 (42%), Gaps = 10/311 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F LL +++A +F ++ PN T N+++ G+ E G+++ F +EM+
Sbjct: 510 FTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMI 569
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +Y I G C G +A + + + C + T L+HG +
Sbjct: 570 EKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + +M R + D+ Y +I ++ +D + L+ EM ++ + D+V Y +M
Sbjct: 630 EALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMI 689
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
K+ + ++D MI VP T ++ C V+ L +
Sbjct: 690 DAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSV 749
Query: 420 P----HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANE 474
P +G LD+L G+ G ++A E +L + + A+Y ML R + Q E
Sbjct: 750 PNQVTYGCFLDILTKGV---GDMKKAVELHNAIL-KGLLANTATYNMLIRGFCRQGRMEE 805
Query: 475 KLEDLDRMIKN 485
E + RMI +
Sbjct: 806 ASELITRMIGD 816
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 17/206 (8%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
M+ SK ++E +D M E V + ++ C + EA L
Sbjct: 688 MIDAKSKTGDFKEAFGIWDLMINEGCVP----NEVTYTAVINGLCKAGFVNEAEI----L 739
Query: 205 LSRFAPNNKTMNILLLGF------KESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S+ P N N + G K GD+ A+E+ H +L+G + TYN+ I G+
Sbjct: 740 CSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVEL--HNAILKGLLANTATYNMLIRGF 797
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C++G +A L M P T TT+I ++ +A +L++ M ++ ++PD
Sbjct: 798 CRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDR 857
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEM 343
AYN +I ++ A EL +EM
Sbjct: 858 VAYNTLIHGCCVAGEMGKATELRNEM 883
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 99/235 (42%), Gaps = 13/235 (5%)
Query: 166 EREIFVGIRKFGSEE--------FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+R++F+G+ K + + ++ A + KEA ++ +++ PN T
Sbjct: 662 DRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYT 721
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G ++G V E+ +M P+ VTY +D K GD + E +
Sbjct: 722 AVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG--VGDMKKAVELHNAI 779
Query: 277 --ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
L + T LI G + +A +L M + PD Y MIS L R D+
Sbjct: 780 LKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCRRNDVK 839
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A+EL + M EK I D V Y+T+ G + + +L + M+ P T T
Sbjct: 840 KAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 58/134 (43%)
Query: 193 EMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+MK+A + +L N T N+L+ GF G + M+ G P +TY
Sbjct: 768 DMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTT 827
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I C++ A+ L+ M P TLIHG + + +A +L +EM ++
Sbjct: 828 MISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Query: 313 LKPDIGAYNAMISS 326
LKP+ IS+
Sbjct: 888 LKPNTETSETTISN 901
>gi|410109887|gb|AFV61023.1| pentatricopeptide repeat-containing protein 11, partial [Junellia
succulentifolia]
Length = 429
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 89 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 127
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +FC + E++ A+SVF +
Sbjct: 128 ---------YEESLEC--GYPASLYF---------FNILMHSFCKEGEIRLAQSVF-DAI 166
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ M G +P V TY++ I+G CK+
Sbjct: 167 TKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKM 226
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
D LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 227 DDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTL 286
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 287 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENI 346
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 347 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 399
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 121/287 (42%), Gaps = 3/287 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + ++ + ESG + Y
Sbjct: 35 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGIITAYLESGFLRDAIECYR 94
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 95 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFCKEG 154
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DLN L M+ + D TY
Sbjct: 155 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEXFRLKKAMQASGVQPDVYTYS 214
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 215 VLINGLCKESKMDDXNELFDEMLDXGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 274
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC +G ++A + +M ++ + + +Y L
Sbjct: 275 SLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 321
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 127 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L M ++PD+ Y+ +I+ L + ++ EL DEM + + + V
Sbjct: 187 KLGDLNEXFRLKKAMQASGVQPDVYTYSVLINGLCKESKMDDXNELFDEMLDXGLVPNGV 246
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLVTYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE +M+ ++ + +Y L L Q
Sbjct: 307 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRXRMIKENIRLDDVAYTALISGLCQEG-- 364
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 365 -RSVDAEKMLREMLSVGLKP 383
>gi|414586846|tpg|DAA37417.1| TPA: hypothetical protein ZEAMMB73_755201 [Zea mays]
Length = 612
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 36/300 (12%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+ +FN+L++ ++ AR+VF ++L R P T N L+ G ++ D+
Sbjct: 242 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 301
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG----- 291
M G P V TY I G CK G DAM +FEEM P+ +TTLI
Sbjct: 302 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 361
Query: 292 ---AGL---------------------------VRNIHQARQLFDEMPKRNLKPDIGAYN 321
AGL VR++ A + +EM K LKPD Y
Sbjct: 362 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYT 421
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + +L+ AME+ EM ++ + D+VTY + GL K+ ++ M+E
Sbjct: 422 TLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEA 481
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T M++ FC N V G + ++G P ++++ G CS G+ + A
Sbjct: 482 GLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA 541
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +Q C +++A +F ++ R PN + L+ + GDVTA EM
Sbjct: 315 YGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMA 374
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA------- 292
RG + +V YN ++G+C+ A + EEM + P T TTLI G
Sbjct: 375 TRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELD 434
Query: 293 ----------------------GLVRNIHQARQLFD------EMPKRNLKPDIGAYNAMI 324
L+ + +A + D EM + L+PD Y +I
Sbjct: 435 TAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVI 494
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + D+ + + EM+ K VTY+ + G ++ L + M+
Sbjct: 495 DAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVC 554
Query: 385 PKTRTVVMLMKFFCVNFRV 403
P T +L+ C + +V
Sbjct: 555 PNDITYNILLDGHCKHGKV 573
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +A + +++ + P+N T +++ F ++GDV EM
Sbjct: 455 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ 514
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVR 296
+G P +VTYN+ ++G+C G +A L M + P+ T L+ G G VR
Sbjct: 515 NKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVR 574
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ + + + + D G Y ++I+ ++
Sbjct: 575 DTEELKS------AKGMVSDFGVYTSLINEFVK 601
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ +A + + + P+ +N ++ +IR L +A + DEM + + VT++
Sbjct: 222 SVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFN 281
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G+ K+S L L M + P T ++ C R+ + ++ + +R
Sbjct: 282 TLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER 341
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P+ L L+ C G E +M R + +Y L
Sbjct: 342 GLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 388
>gi|242056423|ref|XP_002457357.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
gi|241929332|gb|EES02477.1| hypothetical protein SORBIDRAFT_03g005950 [Sorghum bicolor]
Length = 543
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/382 (23%), Positives = 171/382 (44%), Gaps = 10/382 (2%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-Q 130
+L L SN AL FF + P + A+ + L IL RM+ +L + +
Sbjct: 121 ILTVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPE 180
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
++T K +++L+R + +E +E F + ++ + G F +LL + C
Sbjct: 181 ERRVVVVTNKMFAVLLNRYAGAHKVQEAIEVF-YLRKDYGFELDLVG---FQILLMSLCR 236
Query: 191 QKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
K ++EA ++F + F K+ NI+L G+ G + + +++++ + TY
Sbjct: 237 YKHVEEAEALFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTY 296
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
I+ K G A++LF++M P + +I I +A ++F EM
Sbjct: 297 GTFINALAKNGRISAAVKLFKKMWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMND 356
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
R + D+ YN +I L + + + EL+D+ME K +N TY + L + +
Sbjct: 357 RLCQADVATYNTLIKYLCKKKRMEKVYELLDDMEAKGCSPNNRTYS---YVLKTTEKPKD 413
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHGHALDLLV 429
V L RM + + T +++ + N++ + G+ +W + G P + ++V
Sbjct: 414 VIALMQRMEQTGCELDSDTYNLILNLY-TNWKYEKGVQQVWDEMERNGSGPDQRSFTIMV 472
Query: 430 TGLCSRGRWEEAFECSKQMLVR 451
GL S+G+ +EA + M R
Sbjct: 473 HGLHSQGKLDEALQYYTTMKSR 494
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 60/307 (19%), Positives = 122/307 (39%), Gaps = 11/307 (3%)
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN-NKTMNILLLGFKESGDVTAMEMF 234
+ SE VL ++ +A L RFA + ++ + + +L + S A+ F
Sbjct: 87 YASEVLKVLKSTSADNADLSDA-------LRRFAVHMDEDIILTVLQKQRSNWQVALAFF 139
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--ERVACLPSLQTITTLIHGA 292
L G+ Y +D + +LF+E+ ER + + + L++
Sbjct: 140 NWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRVVVVTNKMFAVLLNRY 199
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A ++F + D+ + ++ SL R + + A L E +++ H
Sbjct: 200 AGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVEEAEALFREKKDE-FPHVT 258
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
+++ + G L ++++ +I K T + N R+ + L+
Sbjct: 259 KSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTYGTFINALAKNGRISAAVKLFKK 318
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ + G P + ++ LC + R EA E +M R Q A+Y L +YL +
Sbjct: 319 MWETGINPDVAICNCIIDQLCFKNRIPEALEIFGEMNDRLCQADVATYNTLIKYLCKKKR 378
Query: 473 NEKLEDL 479
EK+ +L
Sbjct: 379 MEKVYEL 385
>gi|356499079|ref|XP_003518371.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g09680-like [Glycine max]
Length = 615
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 136/319 (42%), Gaps = 36/319 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-------TAME 232
FNVL+ FC ++ AR VF ++ R P + N L+ G +SGDV ME
Sbjct: 251 FNVLMHGFCKAGDVGNARLVFDEIPKRGLRPTVVSFNTLISGCCKSGDVEEGFRLKGVME 310
Query: 233 ----------------------------MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ + EM RG P+ VT+ IDG CK G
Sbjct: 311 SEGVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVD 370
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A++ F+ M P L T LI+G V ++ +AR+L +EM LKPD + +I
Sbjct: 371 LALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLI 430
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ D+ +A+E+ M E+ I D+V + + GL + + ++ M+ F
Sbjct: 431 DGCCKDGDMESALEIKRRMVEEGIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFK 490
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T M++ FC V +G L + G P + L+ GLC +G+ + A
Sbjct: 491 PDDPTYTMVIDCFCKKGDVKMGFKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKML 550
Query: 445 SKQMLVRRRQVSEASYRML 463
ML ++ +Y +L
Sbjct: 551 LDAMLNVGVAPNDITYNIL 569
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 170/400 (42%), Gaps = 26/400 (6%)
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS----------------HVQ 130
L FF P F T ++ LH L R QA L+S +
Sbjct: 103 LSFFNHLASRPPFRHTLHSYCTMLHFLCLHRMLPQAHSLVSFLVSRKGTNSASTLFSSIL 162
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF-----GSEEFNVLL 185
RT P S+ L + +Y ++ D ++ V KF G E N+L
Sbjct: 163 RTMPRHHH-HHHSVGLVFDALISAYVDSGFTPDAVQCFRLVTKNKFPVPIRGCE--NLLR 219
Query: 186 QAFCTQK-EMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+ + E++ + ++++++L S + P N+L+ GF ++GDV + + E+ RG
Sbjct: 220 RVVRLRPVEIERSWALYLEVLDSGYPPKIYFFNVLMHGFCKAGDVGNARLVFDEIPKRGL 279
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
RP+VV++N I G CK G + RL ME P + T + LI+G + +
Sbjct: 280 RPTVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFTFSALINGLCKEGRLDEGSL 339
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
LFDEM R L P+ + +I + ++ A++ M + + D VTY+ + GL
Sbjct: 340 LFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLC 399
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K L+ +L + M P T L+ C + ++ L + +++ G
Sbjct: 400 KVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEEGIELDDV 459
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
A L++GLC GR +A ML + + +Y M+
Sbjct: 460 AFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMV 499
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 125/305 (40%), Gaps = 15/305 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMERE-----IFVGIRKFGSEEFNVLLQAFCTQK 192
T+ S + ++S K EE ME E +F F+ L+ C +
Sbjct: 282 TVVSFNTLISGCCKSGDVEEGFRLKGVMESEGVCPDVFT---------FSALINGLCKEG 332
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+ E +F ++ R PN T L+ G + G V + M+ +G RP +VTYN
Sbjct: 333 RLDEGSLLFDEMCGRGLVPNGVTFTTLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYN 392
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I+G CK G +A RL EM P T TTLI G ++ A ++ M +
Sbjct: 393 ALINGLCKVGDLKEARRLVNEMTASGLKPDKITFTTLIDGCCKDGDMESALEIKRRMVEE 452
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ D A+ A+IS L R ++ A ++ +M D+ TY + K ++
Sbjct: 453 GIELDDVAFTALISGLCREGRVHDAGRMLTDMLSAGFKPDDPTYTMVIDCFCKKGDVKMG 512
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
KL M VP T LM C ++ L +++ G P+ ++L+ G
Sbjct: 513 FKLLKEMQSDGHVPGVVTYNALMNGLCKQGQMKNAKMLLDAMLNVGVAPNDITYNILLDG 572
Query: 432 LCSRG 436
G
Sbjct: 573 HSKHG 577
>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
Length = 725
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 149/355 (41%), Gaps = 11/355 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQA-WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
F P ++ LH + + A W L V R P + S + +++ + K +E
Sbjct: 75 FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPP--DVVSYTTVINGLCKLDQVDE 132
Query: 158 TLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
D+M +R + +G+ L+ FC ++ A + K+ R + PN T
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGT-----LVDGFCRVGDLDGAVELVRKMTERGYRPNAITY 187
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N ++ G + + + EM G P V TY+ +D K G DA RL E M
Sbjct: 188 NNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMV 247
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P++ T ++L+HG + +A L M + P+I YN +I + ++
Sbjct: 248 SKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRID 307
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L++EM + + VTY + K E L + M+E +VP T L+
Sbjct: 308 EAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLL 367
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
FC V+ L +I +G P+ + + ++ GLC + E +QML
Sbjct: 368 DMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQML 422
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 100/412 (24%), Positives = 173/412 (41%), Gaps = 32/412 (7%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM---SIMLSRISK--- 151
+P + LH L + D+A L+ + R+ P+++T ++ L RI +
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYH 311
Query: 152 -------------FQSYEETLEAFDRMER-EIFVGIRKFGSEE--------FNVLLQAFC 189
+Y L+AF + + E +G+ + E+ +N LL FC
Sbjct: 312 LLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFC 371
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ E++ A + ++ + PN + N ++ G ++ V + +M+ P +V
Sbjct: 372 KKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIV 431
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+N ID CK A LF ++ C P+L T +L+HG R QA L EM
Sbjct: 432 TFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREM 491
Query: 309 P-KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
K+ PDI YN +I L + + ++ A +L +M + D+VTY + L K
Sbjct: 492 TRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRF 551
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
++ + + M++ F P T L+ FC +D L + L+ +G P +
Sbjct: 552 MDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSI 611
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ L RGR +A E + ML +Y L + A+ E DL
Sbjct: 612 FIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDL 663
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 126/259 (48%), Gaps = 1/259 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+L+ C + +A F ++ P++ T N ++ G +S + EMV GF
Sbjct: 16 ILRGLCDAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGF 75
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+V +YN + G+CK +A+ L E+M C P + + TT+I+G + + +A +
Sbjct: 76 APNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACR 135
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ D+M +R +P++ Y ++ R DL+ A+EL+ +M E+ + +TY+ + GL
Sbjct: 136 VMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLC 195
Query: 364 KSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
L+ +L+ M E G P T ++ + +VD L ++ +G P+
Sbjct: 196 SGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNV 255
Query: 423 HALDLLVTGLCSRGRWEEA 441
L+ GLC G+ +EA
Sbjct: 256 VTYSSLLHGLCKAGKLDEA 274
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 164/381 (43%), Gaps = 48/381 (12%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH-VQR-THPSLLTLKSMSIMLSRISKFQSYEET 158
P ++ ++ L ++ D+A +M +QR P+++T ++ R+ E
Sbjct: 112 PDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVEL 171
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+ ER G R + +N ++ C+ +++ A +F ++ P+ T +
Sbjct: 172 VRKM--TER----GYRP-NAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYS 224
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ +SG V MV +G P+VVTY+ + G CK G +A L + M R
Sbjct: 225 TIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRS 284
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC------ 330
C P++ T T+I G + I +A L +EM +P++ Y ++ + +C
Sbjct: 285 GCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344
Query: 331 -----------------------------RDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++ A +L+ M +K + V+Y+T+ G
Sbjct: 345 IGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAG 404
Query: 362 LMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K++ + EGV L ++M+ VP T ++ C +RVD+ L+ + + G P
Sbjct: 405 LCKATKVHEGV-LLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTP 463
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ + LV GLC R+++A
Sbjct: 464 NLVTYNSLVHGLCKSRRFDQA 484
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 113/272 (41%), Gaps = 3/272 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ A C + A +F + S PN T N L+ G +S E EM
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMT 492
Query: 240 LR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G P ++TYN IDG CK A +LF +M P T + +I R +
Sbjct: 493 RKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFM 552
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A + + M K P Y +I + +L+ A+E++ + K D VT+
Sbjct: 553 DEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIF 612
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L +L + M+ VP T T L+K FC R + ++L+ + G
Sbjct: 613 IDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGC 672
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF-ECSKQML 449
P LV L + +++ E SK M+
Sbjct: 673 EPDNATYTTLVGHLVDKKSYKDLLAEVSKSMV 704
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 106/244 (43%), Gaps = 6/244 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A E F +Q TP + +H L + R FDQA L+ + R + + + +
Sbjct: 449 AYELFNL-IQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTV 507
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+ + K + + + F +M + G+ +++++ + C + M EA +V +L
Sbjct: 508 IDGLCKSKRVDRAYKLFLQMLSD---GLAP-DDVTYSIVISSLCKWRFMDEANNVLELML 563
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
F P T L+ GF ++G++ ++ +G P VVT++I ID K+G
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A L E M R +P T TL+ G A LF+ M + +PD Y ++
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683
Query: 325 SSLI 328
L+
Sbjct: 684 GHLV 687
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/190 (24%), Positives = 84/190 (44%), Gaps = 6/190 (3%)
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F EM K PD YN MI+ L + L+ A+ L++EM + + +Y+T+ G K
Sbjct: 33 FREMSK-TCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 91
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
++ +E L ++M+ P + ++ C +VD + +I RG P+
Sbjct: 92 ANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 151
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
LV G C G + A E ++M R + + +Y + L + KL+ ++ K
Sbjct: 152 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLC---SGRKLDSALQLFK 208
Query: 485 NLQ--AVLPP 492
++ PP
Sbjct: 209 EMEESGSCPP 218
>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
sativa Japonica Group]
gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 554
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 157/340 (46%), Gaps = 18/340 (5%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLL 185
+R P ++T +I+L K Y++ ++ D M R G +NV++
Sbjct: 187 RRCVPDVVT---YTILLEATCKRSGYKQAMKLLDEM--------RDKGCTPDIVTYNVVV 235
Query: 186 QAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
C + + +A F+K L + PN + NI+L G + E EM +G
Sbjct: 236 NGICQEGRVDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGC 294
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+VVT+N+ I C+KG A+ + E++ + C P+ + L+H + + +A
Sbjct: 295 PPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMA 354
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
D M R PDI +YN ++++L R +++ A+EL+ ++++K ++Y+T+ GL
Sbjct: 355 FLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLT 414
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K+ + +L + M+ P T + C R++ + +G + D G P+
Sbjct: 415 KAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTV 474
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ ++ GLC R A + M+ +E++Y +L
Sbjct: 475 LYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 514
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 91/382 (23%), Positives = 160/382 (41%), Gaps = 22/382 (5%)
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
L L R D+A L+ +R P T ++ I K + T EA R +
Sbjct: 72 LRSLVRRGELDEALRLVGSARR--PDAGTCAAL------IKKLSASGRTAEA-----RRV 118
Query: 170 FVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
G + +N ++ +C ++ AR + ++ P+ T N L+ G G
Sbjct: 119 LAAC---GPDVMAYNAMVAGYCGAGQLDAARRLVAEM--PVEPDAYTYNTLIRGLCGRGR 173
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
EM+ R P VVTY I ++ CK+ + AM+L +EM C P + T
Sbjct: 174 TANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNV 233
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
+++G + A + +P +P+ +YN ++ L A ELM EM +K
Sbjct: 234 VVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKG 293
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ VT++ + L + +E ++ +++ + P + + L+ FC ++D +
Sbjct: 294 CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAM 353
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ RG P + + L+T LC G + A E Q+ + SY + L
Sbjct: 354 AFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGL 413
Query: 468 VQAN-ANEKLEDLDRMI-KNLQ 487
+A E LE L+ M+ K LQ
Sbjct: 414 TKAGKTKEALELLNEMVSKGLQ 435
>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 821
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 131/295 (44%), Gaps = 31/295 (10%)
Query: 206 SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
S P+ +T L+ GF + G + + F++EM+ G P+ TY IDGYCK+G
Sbjct: 471 SNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDV 530
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A+ LFE ME C S++T +I G +A + +M ++ L+P+ Y ++I+
Sbjct: 531 ALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLIN 590
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK--------------------- 364
L + N A ++ EME+K + TY ++ +GL +
Sbjct: 591 GLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTENGCEPTIDT 650
Query: 365 -SSGLEGVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
S+ + G+C+ L + M E P L+ C + +VD L ++ +
Sbjct: 651 YSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMA 710
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+GF PH +L+ LC R EEA + +L ++ + +L L+Q
Sbjct: 711 VKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQ 765
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/380 (23%), Positives = 169/380 (44%), Gaps = 12/380 (3%)
Query: 98 HFTPTPDAFEKTLHILA--RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQ 153
F PDAF T IL R R D+A+E+ + + +P+ +T ++ I+
Sbjct: 225 QFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTL------INGLC 278
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
+ EA D +E GI + V + + C + +A ++ + + +P+
Sbjct: 279 NEGRIGEAMDMLEEMTEKGIEP-TVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSV 337
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T ++ G +G + YH+M+ G P+ VTYN I+ C +G FG A+++F+
Sbjct: 338 QTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDW 397
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
ME L + QT +I G + +I +A +F++M K P + YN +I ++
Sbjct: 398 MEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGY 457
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
LN A + M+E D TY + G K L+ + M++ P T
Sbjct: 458 LNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTA 517
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++ +C ++D+ L+L+ + + G + +++GL R+ EA + +M +
Sbjct: 518 MIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQG 577
Query: 453 RQVSEASYRMLQRYLVQANA 472
Q + +Y L L + A
Sbjct: 578 LQPNTITYTSLINGLCKNTA 597
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 140/344 (40%), Gaps = 10/344 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + + L + D A L+ + + PS+ T ++ L R K E
Sbjct: 300 PTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKM---ELA 356
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
+ + +M +E V + +N L+ CT+ A +F + N +T N
Sbjct: 357 IGMYHKMLKEGLVP----NTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQ 412
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G D+ + +++M+ G P+VVTYN I K+G +A R M+
Sbjct: 413 IIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESN 472
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P +T LI G + A F EM K + P+ Y AMI + ++ A+
Sbjct: 473 CEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVAL 532
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L + MEE TY+ + GL K + K +M E P T T L+
Sbjct: 533 SLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGL 592
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C N +L ++ + + P+ H L+ GLC G+ + A
Sbjct: 593 CKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAA 636
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 152/375 (40%), Gaps = 45/375 (12%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
PSLLT +M +L + K Q E + F++ IF + + L+ C ++
Sbjct: 195 PSLLTFNTMINILCKKGKVQ---EAVLVFNK----IFQFDLCPDAFTYTSLILGHCRNRK 247
Query: 194 MKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYN 251
+ +A VF +++ PN+ T + L+ G G + AM+M EM +G P+V TY
Sbjct: 248 LDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDML-EEMTEKGIEPTVYTYT 306
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ I C G DA+ L M + C PS+QT T +I G + A ++ +M K
Sbjct: 307 VPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKE 366
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEME---------------EKRIGHDN---- 352
L P+ YNA+I+ L A+++ D ME + G D+
Sbjct: 367 GLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKA 426
Query: 353 ----------------VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
VTY+T+ +K L + M E P RT L+
Sbjct: 427 MVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISG 486
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
FC ++D + + ++ G P+ ++ G C G+ + A ++M S
Sbjct: 487 FCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSAS 546
Query: 457 EASYRMLQRYLVQAN 471
+Y + L + N
Sbjct: 547 IETYNAIISGLSKGN 561
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 97/444 (21%), Positives = 176/444 (39%), Gaps = 37/444 (8%)
Query: 37 TRIINDHPFPDQPLHPTLLQHL-------------PQTTPLSSTLVENVLGRLFAAHSNG 83
+ + +PFP P L+ + P+ L+STL + + ++ H N
Sbjct: 25 SSVPTSYPFPKTTPFPNLVFKVLDLISTDPHWPKNPELNRLASTLRPHHVSKIINTHINT 84
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF---DQAWELMSHVQRTHPSLLTLK 140
AL+FF + + + F L+ L + + D LM R L K
Sbjct: 85 DTALQFFYWISKRHFYKHDMGCFVSMLNRLVKDKILAPADHVRILMIKACRNEDEL---K 141
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
++ L IS S G+ F FN LL + A++V
Sbjct: 142 RVTDFLHGISSSDS-----------------GLFGFTLYSFNTLLLQLGKFDMVTSAQNV 184
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ ++ S P+ T N ++ + G V + ++++ P TY I G+C+
Sbjct: 185 YAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCR 244
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
A +F+ M + C P+ T +TLI+G I +A + +EM ++ ++P +
Sbjct: 245 NRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYT 304
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y ISSL ++ A+ L+ M +K TY + GL ++ +E +Y +M+
Sbjct: 305 YTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKML 364
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ VP T T L+ C R + L ++ ++ G + + ++ GL E
Sbjct: 365 KEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIE 424
Query: 440 EAFECSKQMLVRRRQVSEASYRML 463
+A +ML + +Y L
Sbjct: 425 KAMVVFNKMLKDGPSPTVVTYNTL 448
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/194 (19%), Positives = 90/194 (46%)
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+L + TL+ G + A+ ++ ++ +KP + +N MI+ L + + A+ +
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+++ + + D TY ++ G ++ L+ +++DRM++ P + T L+ C
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
R+ +++ + ++G P + + ++ LC GR ++A + M + S +Y
Sbjct: 281 GRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTY 340
Query: 461 RMLQRYLVQANANE 474
+ L +A E
Sbjct: 341 TAIISGLFRAGKME 354
>gi|449476381|ref|XP_004154721.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 26/350 (7%)
Query: 148 RISKFQSYEETLEA---FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
RI+ + LEA F M+ + +G+ K + +N++L+ FC++ +EAR++F +
Sbjct: 264 RIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ + ++ NI +LG SG + + +EM + +P++ +YNI + G CK G F
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA + M P T +TL+HG I +A + EM + P++ N ++
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK----------- 373
SL + + A +L+ M E+ G DNVT +TM GL K+ L+ +
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSA 503
Query: 374 -----------LYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+D G K +P + T ++ C RVD +I + P
Sbjct: 504 SLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD 563
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
D + C +G+ AF K+M + S +Y L + L N
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSEN 613
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
EI G+ GS L +F ++ + R+ K L P++ T ++ G + G
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFI---DLFDIRNNGKKCL----PDSITYATIIGGLCKVGR 544
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
V + EM+ + P + ++ I YCK+G A R+ +EME+ C SL+T +
Sbjct: 545 VDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNS 604
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI G G I + L DEM +R + P++ YN +IS L L A L+DEM +K
Sbjct: 605 LIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKG 664
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
I + T+ + K+ +L++
Sbjct: 665 ISPNIYTFRILIGAFFKACDFGAAQELFE 693
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 27/290 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ LL +C + ++ EA V +++ PN T NILL + G + E M
Sbjct: 404 YSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMN 463
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-----------------------ERV 276
RG+ VT N I+G CK G A+ + M
Sbjct: 464 ERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
CLP T T+I G V + +A++ EM + L PD ++ I + + L++A
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSA 583
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++ EME+K TY+++ GL + + + L D M E P T ++
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL---CSRGRWEEAFE 443
++ L ++ +G P+ + +L+ C G +E FE
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFE 693
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 121/273 (44%), Gaps = 20/273 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK---LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N+L + C+ KE + +++ +++ P T N+L+ E G + + +
Sbjct: 121 YNLLFR--CSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREVFDK 178
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M +G +P+ + I + GYC+ G + L +EM LP+ T+I
Sbjct: 179 MSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQ 238
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME-EKRIG---HDNV 353
+A +L ++M + L PDI +N I++L + + A + +M+ ++ +G + V
Sbjct: 239 TVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTV 298
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ M G E ++D M + + + ++ V G L +L
Sbjct: 299 TYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL------VRSGKLLEAHL 352
Query: 414 I-----DRGFCPHGHALDLLVTGLCSRGRWEEA 441
I ++ P+ ++ ++LV GLC G + +A
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 2/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + EA+ ++++ + +P++ + + + + G +++ EM
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G S+ TYN I G + + L +EM+ P++ T +I +
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L DEM ++ + P+I + +I + + D AA EL E+ GH Y MF
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMF 710
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L+ +L++ ++ K L++ C + ++D + ++D+ +
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ ++ L RG A E +++M+
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERMM 800
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 83/201 (41%), Gaps = 4/201 (1%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P + YN+ K+ + L+++M P T LI + + AR++
Sbjct: 116 PPISFYNLLFRCSLKESRVDCVIWLYKDMAVAKVKPQTYTFNLLISALCEMGYLENAREV 175
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
FD+M ++ KP+ + ++ R + ++L+DEM + V Y+T+ L
Sbjct: 176 FDKMSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCG 235
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL-IDRGFC---P 420
KL ++M E P T + C + ++ ++ + ID P
Sbjct: 236 EGQTVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKP 295
Query: 421 HGHALDLLVTGLCSRGRWEEA 441
+ +L++ G CS G +EEA
Sbjct: 296 NTVTYNLMLEGFCSEGMFEEA 316
>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
Length = 654
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 82/316 (25%), Positives = 135/316 (42%), Gaps = 47/316 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF + + EA ++ ++L R P+ T + ++ GF + + A E ++ M
Sbjct: 294 YNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMA 353
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P ++T+N I GYC+ D ++L EM + + T TTLIHG V +++
Sbjct: 354 TKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLN 413
Query: 300 QARQLFDEM----------------------------------------------PKRNL 313
A+ L EM P +
Sbjct: 414 AAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGV 473
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ YN +IS LI A EL +EM + I D +TY+++ GL K S L+ +
Sbjct: 474 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQ 533
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
++D M F P T L+ +C RVD GL L+ + RG + L+ G
Sbjct: 534 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFR 593
Query: 434 SRGRWEEAFECSKQML 449
G A + ++M+
Sbjct: 594 KVGNINGALDIFQEMM 609
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 87/356 (24%), Positives = 144/356 (40%), Gaps = 49/356 (13%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
E ++ FC+ EA+ + ++L R +P+ T N L+ F + G E Y
Sbjct: 256 ERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYD 315
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ RG PS +TY+ IDG+CK+ A +F M C P + T TLI G +
Sbjct: 316 EMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAK 375
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +L EM + L + Y +I + DLNAA +L+ EM + + VT +
Sbjct: 376 RVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCN 435
Query: 357 TMFFGLMKS--------------------------SGLEGVCKLYDRMI-----EGKF-- 383
T+ GL + +G+E + Y+ +I EGKF
Sbjct: 436 TLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLE 495
Query: 384 -------------VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
VP T T ++ C R+D ++ + + F P+ L+
Sbjct: 496 AEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLIN 555
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
G C GR ++ E +M R + +Y ++ + N N L+ M+ +
Sbjct: 556 GYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 92/385 (23%), Positives = 162/385 (42%), Gaps = 33/385 (8%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHP 134
F + +A + + L+ +P + ++ + F +A EL + + P
Sbjct: 265 FCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIP 324
Query: 135 SLLTLKSMSIMLSRISKFQSYEET--LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
S +T SM + ++ + E L A +I FN L+ +C K
Sbjct: 325 STITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIIT---------FNTLIAGYCRAK 375
Query: 193 EMKEARSVFVKLL-----SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+ + +KLL + N T L+ GF + GD+ A + EMV G P+V
Sbjct: 376 RVDDG----IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNV 431
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTLIHGAGLVR 296
VT N +DG C G DA+ +F+ M++ P +QT LI G
Sbjct: 432 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEG 491
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+A +L++EMP R + PD YN++I L + L+ A ++ D M K + VT+
Sbjct: 492 KFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFT 551
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G K+ ++ +L+ M V T + L+ F ++ L+++ ++
Sbjct: 552 TLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMAS 611
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEA 441
G P + ++TGL S+ + A
Sbjct: 612 GVYPDTITIRNMLTGLWSKEELKRA 636
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 134/307 (43%), Gaps = 12/307 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L++ FC+ ++ A S F K+ F P T + LL G ++ +H+M
Sbjct: 116 FTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMC 175
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P+VVT+ ++G C++G +A+ L + M P+ T T++ G + +
Sbjct: 176 ----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTV 231
Query: 300 QARQLFDEMPK-RNLKPDIGAY-----NAMISSLIRCRDLNAAMELMDEM-EEKRIGHDN 352
A L +M + ++KP++ + MI+ + A +L+ EM E K+I D
Sbjct: 232 SALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDV 291
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+ + +K +LYD M+ +P T T ++ FC R+D +++
Sbjct: 292 VTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYL 351
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ +G P + L+ G C R ++ + +M + +Y L Q
Sbjct: 352 MATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGD 411
Query: 473 NEKLEDL 479
+DL
Sbjct: 412 LNAAQDL 418
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 114/248 (45%), Gaps = 9/248 (3%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+ +H ++ + A +L+ + + P+++T ++ L K + E +A
Sbjct: 398 TYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 457
Query: 163 DRMEREI-----FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ + +I F G+ + +N+L+ + + EA ++ ++ R P+ T N
Sbjct: 458 QKSKMDIDASHPFNGVEP-DVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYN 516
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G + + + M + F P+VVT+ I+GYCK G D + LF EM R
Sbjct: 517 SVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRR 576
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+ + T TLIHG V NI+ A +F EM + PD M++ L +L A
Sbjct: 577 GIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITIRNMLTGLWSKEELKRA 636
Query: 337 MELMDEME 344
+ ++++++
Sbjct: 637 VAMLEDLQ 644
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 63/283 (22%), Positives = 124/283 (43%), Gaps = 35/283 (12%)
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTA 230
G FG E L F K +++A +F ++ SR P+ L+ G +
Sbjct: 38 GESGFGGESLK-LRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDV 96
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+ + +M +R + ++ I + +C A+ F ++ ++ P++ T +TL+H
Sbjct: 97 VISLHRKMEMRRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLH 156
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + I +A LF +M KP++ + +++ L R + A+ L+D M E +
Sbjct: 157 GLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQP 212
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ +TY T+ ++G+CK+ D + + K V + N+
Sbjct: 213 NQITYGTI---------VDGMCKMGDTVSALNLLRKMEEVSHIKP------------NVV 251
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ ++R C ++ G CS GRW EA + ++ML R++
Sbjct: 252 IWPLERRTC--------MINGFCSSGRWSEAQQLLQEMLERKK 286
>gi|255660852|gb|ACU25595.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 46/353 (13%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A++ F+ T QH P D K L L RYF W+ V + +P+ L
Sbjct: 85 AVQCFRLTKQHKIRVPF-DTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYF----- 138
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
FN+L+Q FC + EM+ A+SVF
Sbjct: 139 ------------------------------------FNILMQRFCKEGEMRLAQSVF-DA 161
Query: 205 LSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ P+ + N L+ G+ + GD+ M G +P V TY+I I+G CK+G
Sbjct: 162 ITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGK 221
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A LF EM +P+ T TTLIHG + A +++ +M + L PD+ YN
Sbjct: 222 LDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNT 281
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L + +L +L+DEM + D ++Y T+ G K LE +L ++MI+
Sbjct: 282 LIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQES 341
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
L+ C R + ++ G P +++ C +
Sbjct: 342 IRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TLI+G
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M +PD+ Y+ +I+ L + L+ A EL +EM + + + V
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I G P + L+ G C G E A E +M+ ++ + +Y L L +
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RASDAEKMLREMLSVGLKP 379
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 110/247 (44%), Gaps = 10/247 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L S H P + T SI+++ + K +E
Sbjct: 169 PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYT---YSILINGLCKEGKLDEA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E F+ M V F L+ C +++ A ++ ++LS+ +P+ T N
Sbjct: 226 NELFNEMLDNGLVP----NGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G++ + EM++ G +P ++Y IDG CK+G A+ L +M + +
Sbjct: 282 LIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQES 341
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
T LI A ++ EM LKPD G Y +I+ + RD A
Sbjct: 342 IRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTAS 401
Query: 338 ELMDEME 344
+L+ EM+
Sbjct: 402 KLLREMQ 408
Score = 39.7 bits (91), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 43/203 (21%), Positives = 81/203 (39%), Gaps = 11/203 (5%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
+A E F L + P F +H + D A E+ + Q P L+T ++
Sbjct: 224 EANELFNEMLDNG-LVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTL 282
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
L + + + + D ++ I G++ + L+ C + +++ A +
Sbjct: 283 IYGLCKKGELK------QVHDLIDEMIMNGLKP-DKISYTTLIDGSCKEGDLEIALELRN 335
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K++ ++ L+ G + E EM+ G +P TY + I+ +CKK
Sbjct: 336 KMIQESIRLDDVAYTALISCLCREGRASDAEKMLREMLSVGLKPDNGTYTMIINEFCKKR 395
Query: 262 CFGDAMRLFEEMERVACLPSLQT 284
A +L EM+R LP + T
Sbjct: 396 DSKTASKLLREMQRDGPLPGVVT 418
>gi|410109943|gb|AFV61051.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
rotundifolia]
Length = 425
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/353 (27%), Positives = 158/353 (44%), Gaps = 19/353 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E + T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECYTLTREHKLWVPF-DTCRKVLEHLMKLKYFKLVWGFYEDILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 142 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+C
Sbjct: 194 KSAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA L DEM + LKPD
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKF 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ P T M++ FC V G L + G P ++L+ G
Sbjct: 373 LSVGLKPDIGTYTMIINEFCKKGDVWKGSKLLKEMQRNGHAPSVVTYNVLMNG 425
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY +++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEDILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 183 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Vitis vinifera]
Length = 877
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 171/400 (42%), Gaps = 43/400 (10%)
Query: 123 WELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
WE S + + + + + +IM+S + K +E D M + V
Sbjct: 451 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP----NVVS 506
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N ++ C + M A SVF +L+R PN T +IL+ G FK+ A+++F +
Sbjct: 507 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 566
Query: 239 VLR----------------------------------GFRPSVVTYNIRIDGYCKKGCFG 264
L GF PS +TYN +DG+ K+G
Sbjct: 567 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 626
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+ ++ EM P++ T T+LI+G I A + DEM ++ L+ D+ AY+A+I
Sbjct: 627 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 686
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RD+ +A +L E+ E + + + Y++M G + +E Y +MI +
Sbjct: 687 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 746
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
T L+ R+ +L+ ++ +G P +LV GLC++G+ E A +
Sbjct: 747 CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 806
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMI 483
++M + S Y ++ Y + N E D M+
Sbjct: 807 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEML 846
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 8/331 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+++T SI++ K E+ L+ FD+M + + F FN ++ C +
Sbjct: 537 PNVVTY---SILIDGNFKKGDSEKALDLFDQM-LSLNIAPTDF---TFNTIINGLCKVGQ 589
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
M EAR L F P+ T N ++ GF + G++ + Y EM G P+VVTY
Sbjct: 590 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 649
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+G+CK A++ +EM + + LI G R++ A+ LF E+ +
Sbjct: 650 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 709
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
L P+ YN+MIS ++ AA+ +M RI D TY T+ GL+K L
Sbjct: 710 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS 769
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
LY M+ VP T +L+ C +++ + + + P + L+ G
Sbjct: 770 DLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 829
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G +EAF +ML R + +Y +L
Sbjct: 830 FREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 860
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 35/331 (10%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ +C Q + A ++F K+ PN T ++L+ G SG++ Y +M L G
Sbjct: 371 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 430
Query: 243 FRPSVV----------------------------------TYNIRIDGYCKKGCFGDAMR 268
PSV TYNI + CK G +A
Sbjct: 431 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACS 490
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L + M +P++ + +I G N+ A +F +M R+LKP++ Y+ +I
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ D A++L D+M I + T++T+ GL K + +E F+P
Sbjct: 551 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 610
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T ++ F +D L ++ + + G P+ L+ G C R + A + +M
Sbjct: 611 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 670
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ +Y L + E +DL
Sbjct: 671 REKGLELDVTAYSALIDGFCKRRDMESAQDL 701
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N LL+ + +EA +F + + N T NI++ + G + MV +
Sbjct: 439 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 498
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P+VV+YN I G+C+KG A +F +M P++ T + LI G + +A
Sbjct: 499 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 558
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
LFD+M N+ P +N +I+ L + ++ A + + E+ +TY+++ G
Sbjct: 559 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 618
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K ++ +Y M E P T L+ FC + R+DL L + ++G
Sbjct: 619 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 678
Query: 422 GHALDLLVTGLCSRGRWEEA 441
A L+ G C R E A
Sbjct: 679 VTAYSALIDGFCKRRDMESA 698
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ FC +++M+ A+ +F +LL +PN N ++ GF++ ++ A ++Y +M+
Sbjct: 682 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 741
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ TY IDG K+G A L+ EM +P + T L++G +
Sbjct: 742 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 801
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR++ +EM ++N+ P + YN +I+ R +L A L DEM ++ + D+VTY +
Sbjct: 802 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 861
Query: 360 FGLMKS 365
G K
Sbjct: 862 NGKFKG 867
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 200/496 (40%), Gaps = 62/496 (12%)
Query: 44 PFP--DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTP 101
P+P Q PT H +TTPLS +V+ L ++ AL +FK F
Sbjct: 77 PYPRYSQDTVPTSQIH-QETTPLSQN---HVIDALLCHVNDPQSALRYFKRAETQRGFIR 132
Query: 102 TPDAFEKTLHILARM-RYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQ----S 154
DA+ LHIL R A +L++ + PS + I ++ F+
Sbjct: 133 GVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRV 192
Query: 155 YEETLEAFDRMEREIFVGIRKFGS----------EEFNVLLQAFCTQKEMKEARSVFVKL 204
+ L A+ R R I I F + N+LL A + + E R ++ K+
Sbjct: 193 FNYLLNAYIRANR-IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 251
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFY---------------------------- 235
+ R ++ T+++++ + G V E ++
Sbjct: 252 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 311
Query: 236 -------HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM RG+ PS T+ I +G +A+RL EEM +L T+L
Sbjct: 312 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 371
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G N+ A LF+++ + L P+ Y+ +I ++ A EL +M+ I
Sbjct: 372 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 431
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+++ G +K+ E KL+D ++ V T ++M + C ++D +
Sbjct: 432 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACS 490
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
L ++++G P+ + + ++ G C +G + A ML R + + +Y +L
Sbjct: 491 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 550
Query: 469 QANANEKLEDL-DRMI 483
+ +EK DL D+M+
Sbjct: 551 KKGDSEKALDLFDQML 566
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I A F+ M +++ P + N ++++L+R + +L ++M + I D+ T H
Sbjct: 206 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 265
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M +K +E + + E ++++ C +LGL L + +RG
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 325
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS-EASYRMLQRYLVQANANEKL 476
+ P ++ ++G EA ++M+ + ++ + +++ Y Q N + L
Sbjct: 326 WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSAL 385
Query: 477 EDLDRMIKN 485
+++ ++
Sbjct: 386 NLFNKITED 394
>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
Group]
gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
Length = 796
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 139/308 (45%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF +K+A V + + F P+ +T N+L +G ++G V EM
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEME 340
Query: 240 -LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
L P VVTYN +D K C DA+RL EEM P+L T ++ +
Sbjct: 341 RLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +++ + L PD+ YN +I + + ++ A LMDEM K + D T +T+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ L K E +L + FVP + +M + + + L LW +I+R
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
P + L+ GLC R +EA + +++ + E +Y ++ Y + +
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 478 DLDRMIKN 485
++M++N
Sbjct: 581 FHNKMVEN 588
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/361 (22%), Positives = 163/361 (45%), Gaps = 5/361 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D+A+ L ++R +L + + + ++ K++ + L + M + G+ K
Sbjct: 330 DEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK---GV-KPTLV 385
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
N+++++ C + +++EA K+ AP+ T N L+ + ++G+V EM
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V +G + T N + CK + DA L + +P + T++ N
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L+D+M +R L P I YN +I L R L A++ ++E+ EK + D TY+ +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
K LE + +++M+E F P T LM C++ ++D L L+ +++G
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
+ L+ +C G + A M V+ Q +Y ++ L +A +E+ +
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685
Query: 479 L 479
+
Sbjct: 686 M 686
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 21/361 (5%)
Query: 99 FTPTPDA--FEKTLHILARMRYFDQAWELMSHVQR-----THPSLLTLKSMSIMLSRISK 151
F +PDA + L+ R +A L++ ++R T P+ TL S L I +
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQ 296
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFA 209
E++ A+ E ++ +NVL C ++ EA + ++ LS
Sbjct: 297 ATKVVESMTAYG-FEPDL---------RTYNVLAVGLCQAGKVDEAFRLKDEMERLSTAL 346
Query: 210 PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T N L+ FK A+ + EM +G +P++VT+NI + CK+G +A+
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLL-EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
E++ P + T TLI N+ +A L DEM + LK D N ++ +L
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ + A EL+ ++ D V+Y T+ K E +L+D+MIE K +P
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+K C R+ ++ L+++G P ++++ C G E AF +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 449 L 449
+
Sbjct: 586 V 586
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 136/348 (39%), Gaps = 40/348 (11%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+AF M+ + G+ K + N +L C K ++A + R F P+ + +
Sbjct: 437 KAFTLMDEMVGKGL-KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 219 LLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+ FKE A+ + + +M+ R PS+ TYN I G C+ +A+ E+
Sbjct: 496 MAAYFKEYNPEPALRL-WDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P T +IH ++ A + ++M + + KPD+ N +++ L L+ A+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L + EK D +TY+T+ + K ++ +D M P T +++
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLL----------------------------- 428
R + N+ L D G A LL
Sbjct: 675 SEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA 734
Query: 429 -------VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ GLC+ G+ +EA +M+ + V ++Y L L++
Sbjct: 735 LETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782
>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At4g31850, chloroplastic; AltName: Full=Protein PROTON
GRADIENT REGULATION 3; Flags: Precursor
gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
Length = 1112
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/402 (25%), Positives = 176/402 (43%), Gaps = 18/402 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
F P+ + + L + R D L+ ++ P++ T +L R K
Sbjct: 219 FRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN--- 275
Query: 157 ETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNK 213
E E RM+ E G + + VL+ A CT +++ A+ VF K+ R P+
Sbjct: 276 EAYEILKRMDDE------GCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRV 329
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T LL F ++ D+ +++ F+ EM G P VVT+ I +D CK G FG+A + M
Sbjct: 330 TYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVM 389
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
LP+L T TLI G V + A +LF M +KP Y I + D
Sbjct: 390 RDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDS 449
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+A+E ++M+ K I + V + + L K+ +++ + + VP + T M+
Sbjct: 450 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 509
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
MK + +D + L +++ G P ++ L+ L R +EA++ +M +
Sbjct: 510 MKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNL-QAVLPPPT 494
+ + +Y L L N K+++ + + + Q PP T
Sbjct: 570 KPTVVTYNTL---LAGLGKNGKIQEAIELFEGMVQKGCPPNT 608
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 128/292 (43%), Gaps = 7/292 (2%)
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFK 223
ER + GI + G +++ C + AR++F K P T N+L+ G
Sbjct: 737 ERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLL 796
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
E+ + + + ++ G P V TYN +D Y K G + L++EM C
Sbjct: 797 EADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHEC--EAN 854
Query: 284 TITTLIHGAGLVR--NIHQARQL-FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
TIT I +GLV+ N+ A L +D M R+ P Y +I L + L A +L
Sbjct: 855 TITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+ M + + Y+ + G K+ + C L+ RM++ P +T +L+ C+
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
RVD GL+ + L + G P +L++ GL R EEA +M R
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSR 1026
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 137/306 (44%), Gaps = 7/306 (2%)
Query: 165 MEREIFVGIRKFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILL 219
+ +++F+ ++ G +N LL A+ ++ E ++ ++ + N T NI++
Sbjct: 803 IAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVI 862
Query: 220 LGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
G ++G+V A++++Y M R F P+ TY IDG K G +A +LFE M C
Sbjct: 863 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGC 922
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+ LI+G G A LF M K ++PD+ Y+ ++ L ++ +
Sbjct: 923 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 982
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFF 397
E++E + D V Y+ + GL KS LE L++ M + + P T L+
Sbjct: 983 YFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNL 1042
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
+ V+ ++ + G P+ + L+ G G+ E A+ + M+ +
Sbjct: 1043 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1102
Query: 458 ASYRML 463
+Y L
Sbjct: 1103 GTYEQL 1108
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/329 (23%), Positives = 152/329 (46%), Gaps = 12/329 (3%)
Query: 117 RYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
R D + S +++ P ++T +I++ + K ++ E + D M + GI
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTF---TILVDALCKAGNFGEAFDTLDVMRDQ---GIL 395
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGD-VTAME 232
+N L+ + +A +F + S P T + + + +SGD V+A+E
Sbjct: 396 P-NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALE 454
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
F +M +G P++V N + K G +A ++F ++ + +P T ++
Sbjct: 455 TF-EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
V I +A +L EM + +PD+ N++I++L + ++ A ++ M+E ++
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 573
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+T+ GL K+ ++ +L++ M++ P T T L C N V L L +
Sbjct: 574 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFK 633
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++D G P + ++ GL G+ +EA
Sbjct: 634 MMDMGCVPDVFTYNTIIFGLVKNGQVKEA 662
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/320 (25%), Positives = 138/320 (43%), Gaps = 8/320 (2%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKE---SGDVTAMEMF 234
+E N +L+A +++E VF + R + N L FK G +
Sbjct: 118 TETCNYMLEALRVDGKLEEMAYVFDLMQKRII--KRDTNTYLTIFKSLSVKGGLKQAPYA 175
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+M GF + +YN I K +AM ++ M PSLQT ++L+ G G
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGK 235
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
R+I L EM LKP++ + I L R +N A E++ M+++ G D VT
Sbjct: 236 RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 295
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + L + L+ +++++M G+ P T + L+ F N +D W +
Sbjct: 296 YTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEME 355
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
G P +LV LC G + EAF+ M + + +Y L L++ +
Sbjct: 356 KDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVH--- 412
Query: 475 KLEDLDRMIKNLQAVLPPPT 494
+L+D + N++++ PT
Sbjct: 413 RLDDALELFGNMESLGVKPT 432
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 80/355 (22%), Positives = 147/355 (41%), Gaps = 15/355 (4%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTL-KSMSIMLSRISKFQS 154
H T T + + L + ++ ++LM ++R + LT+ KS+S+
Sbjct: 116 HTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVK-------GG 168
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNK 213
++ A +M FV + +N L+ + EA V+ + +L F P+ +
Sbjct: 169 LKQAPYALRKMREFGFV----LNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQ 224
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T + L++G + D+ ++ EM G +P+V T+ I I + G +A + + M
Sbjct: 225 TYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRM 284
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ C P + T T LI R + A+++F++M KPD Y ++ RDL
Sbjct: 285 DDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDL 344
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
++ + EME+ D VT+ + L K+ D M + +P T L
Sbjct: 345 DSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTL 404
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ R+D L L+G + G P + + + G A E ++M
Sbjct: 405 ICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKM 459
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 71/369 (19%), Positives = 156/369 (42%), Gaps = 29/369 (7%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--P 134
+ + + ALE F+ ++ P A +L+ LA+ +A ++ ++ P
Sbjct: 443 YGKSGDSVSALETFE-KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 501
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFC 189
+T ++M+ SK +E ++ M E ++ V N L+
Sbjct: 502 DSVTY---NMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIV---------VNSLINTLY 549
Query: 190 TQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ EA +F+++ + P T N LL G ++G + + MV +G P+ +
Sbjct: 550 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 609
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFD 306
T+N D CK A+++ +M + C+P + T T+I GLV+N + +A F
Sbjct: 610 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF--GLVKNGQVKEAMCFFH 667
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH-DNVTYHTMFFGLMKS 365
+M K+ + PD ++ +++ + A +++ N+ + + ++
Sbjct: 668 QM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVM-LMKFFCVNFRVDLGLNLW-GYLIDRGFCPHGH 423
+G++ +R++ ++++ ++++ C + V L+ + D G P
Sbjct: 727 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLP 786
Query: 424 ALDLLVTGL 432
+LL+ GL
Sbjct: 787 TYNLLIGGL 795
>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 485
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 12/322 (3%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQA 187
R PS++ S +LS+I+K ++Y+ + F ME + G + +N+++
Sbjct: 63 SRPLPSIV---DFSKVLSKIAKSKNYDLVISLFHHME------VCGIGHDLYSYNIVINC 113
Query: 188 FCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C A SV K++ + P+ T++ L+ GF + V +M GFRP
Sbjct: 114 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 173
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VV YN IDG CK G DA+ LF+ MER T +L+ G A +L
Sbjct: 174 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 233
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M R++ P++ + A+I ++ + AM+L +EM + + D TY+++ GL
Sbjct: 234 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 293
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
++ ++ D M+ +P T L+ FC + RVD G L+ + RG +
Sbjct: 294 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 353
Query: 427 LLVTGLCSRGRWEEAFECSKQM 448
++ G GR + A E +M
Sbjct: 354 TIIQGYFQAGRPDAAQEIFSRM 375
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/437 (21%), Positives = 185/437 (42%), Gaps = 38/437 (8%)
Query: 58 LPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA--FEKTLHILAR 115
L + P+ + GR F+ + + E + P P F K L +A+
Sbjct: 22 LQKGNPVIVPFISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAK 81
Query: 116 MRYFDQAWELMSHVQ-------------------RTHPSLLTLKSMSIML---------- 146
+ +D L H++ R ++ L + M+
Sbjct: 82 SKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVT 141
Query: 147 --SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
S I+ F +A D + + +G R +N ++ C + +A +F ++
Sbjct: 142 VSSLINGFCQGNRVFDAIDLVSKMEEMGFRP-DVVIYNTIIDGSCKIGLVNDAVELFDRM 200
Query: 205 -LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ T N L+ G SG + +MV+R P+V+T+ ID + K+G F
Sbjct: 201 ERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKF 260
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+AM+L+EEM R P + T +LI+G + + +A+Q+ D M + PD+ YN +
Sbjct: 261 SEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTL 320
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ + + ++ +L EM ++ + D +TY+T+ G ++ + +++ RM
Sbjct: 321 INGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR-- 378
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P RT +L+ C+N+RV+ L L+ + ++++ G+C G E+A++
Sbjct: 379 -PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWD 437
Query: 444 CSKQMLVRRRQVSEASY 460
+ + + + SY
Sbjct: 438 LFRSLSCKGLKPDVVSY 454
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 132/288 (45%), Gaps = 10/288 (3%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ +E FDRMER+ G+R + +N L+ C +A + ++ R PN T
Sbjct: 191 NDAVELFDRMERD---GVRA-DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
++ F + G + Y EM R P V TYN I+G C G +A ++ + M
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
CLP + T TLI+G + + + +LF EM +R L D YN +I + +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 366
Query: 335 AAMELMDEMEEKRIGHDNV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
AA E+ M+ + N+ TY + +GL + +E L++ M + + T ++
Sbjct: 367 AAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIV 422
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ C V+ +L+ L +G P + +++G C + +W+++
Sbjct: 423 IHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 470
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIF 170
R+ D A + V R P+++T ++ + + KF E ++ ++ M R ++F
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS---EAMKLYEEMTRRCVDPDVF 280
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT 229
+N L+ C + EA+ + ++++ P+ T N L+ GF +S V
Sbjct: 281 T---------YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 331
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ EM RG +TYN I GY + G A +F M+ P+++T + L+
Sbjct: 332 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 388
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G + + +A LF+ M K ++ DI YN +I + + ++ A +L + K +
Sbjct: 389 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 448
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
D V+Y TM G + + LY +M E +P
Sbjct: 449 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484
>gi|225430190|ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
mitochondrial [Vitis vinifera]
gi|296081989|emb|CBI20994.3| unnamed protein product [Vitis vinifera]
Length = 597
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 108/453 (23%), Positives = 190/453 (41%), Gaps = 53/453 (11%)
Query: 52 PTLLQHLPQTTPLSSTLVENVLGRLFAAHSN---GLKAL-EFFKFTLQHPHFTPTPDAFE 107
P L P L+ T ++ G L A S+ K L F++ ++ P F + F
Sbjct: 82 PALSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFN 141
Query: 108 KTLHILARMRYFDQAWEL-MSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ +LA+ R FD AW L + ++ P L++ + ++++ R ++ TL A
Sbjct: 142 SMIDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGM---TLSAIRTF 198
Query: 166 EREIFV-GIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVK---LLSRFAPNNKTMNILL 219
E + IR SE F +LL + C + ++ A F + L + P+ + N+LL
Sbjct: 199 EFAFSLDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLL 258
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ S + E + M +P+VVTY ++GYC+
Sbjct: 259 NGWFRSRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCR-------------------- 298
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+R +A +L EM + ++P++ YN +I SL AM +
Sbjct: 299 ---------------MRRSEKAIELVGEMRGKGIEPNVIVYNPIIDSLAEAGRFKEAMGM 343
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
M+ G TY+++ G K+ L G K+ MI F P T ++F
Sbjct: 344 MERCLVSETGPTISTYNSLVKGFCKAGDLVGASKVLKMMISRGFDPTLTTYNYFFRYFSR 403
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+ + G+NL+ +I+ G P LL+ +C R + A + SK+M R + A+
Sbjct: 404 CGKTEEGMNLYTKMIESGHTPDRLTYHLLIKMMCEEERLDLAVQVSKEMRARGCDLDLAT 463
Query: 460 YRMLQRYLVQANA-NEKLEDLDRMIKNLQAVLP 491
ML L + + E + + MI+ + ++P
Sbjct: 464 STMLVHLLCKMHRLEEAFAEFEDMIR--RGIVP 494
>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 800
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 126/284 (44%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + E + + + F P T N ++ GF ++G + + Y +M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P++VTY IDGYCK C A+++ ++ P + +LI G N+
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMS 613
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A Q+ M K L P+I YN+ I+ + + A+ L ++M ++ I D TY T+
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLI 673
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K + KLY M+ +P T L C N +D L +
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ ++L+ G G+ +EAF +ML R+ + +Y +L
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 165/380 (43%), Gaps = 8/380 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KAL+ F+ TL+ PT + + ++A+EL + R H L + ++
Sbjct: 300 KALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNM 357
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + + +++ + F M GI + +N+L+ C +++++EA +++ K+
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADS---GIPD--AFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 205 -LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ P T + LLL + +G + Y EM +GF P+VVTY + G+ K F
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A L EM++ + T TLI+G +V + + ++ P YN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ I+ + +A + +M K I + VTY + G K+S + K+ + +
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P L+ FC + L + ++ G P+ + +TG + EEA
Sbjct: 593 RPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652
Query: 444 CSKQMLVRRRQVSEASYRML 463
++M+ + A+Y L
Sbjct: 653 LYEKMIKEGIDLDTATYTTL 672
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 76/340 (22%), Positives = 152/340 (44%), Gaps = 9/340 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTP + + FD+A+ L++ +++ S + + +++ + E
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC-NDYTYNTLINGLCVVGRVCEV 510
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E R E E FV + +N ++ F M A +V+ ++ ++ PN T
Sbjct: 511 GEMLKRFETEGFVPT----AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566
Query: 218 LLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+ G+ K S A++M +++ +G RP + YN I G+C++G A+++ M +
Sbjct: 567 FIDGYCKTSCCDLALKML-NDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKD 625
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
LP++ + I G ++ + +A +L+++M K + D Y +I + ++ A
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++L EM K D++T+ + GL ++ ++ KL D M P ML+
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+ N ++ L +++R P D+LV G+ S G
Sbjct: 746 YLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMKSLG 784
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 6/310 (1%)
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
Y++ + FD M ++ S V + + C ++ A V K+ + F P +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCS----VAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N ++ + G + E++ G + SVV + GYC + A+ +FEE
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
R +P+ T T LI G +A +L +M L P +N +I L+ +
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A+ L EM + I D TY+ + L + + L+++M E P T L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +CVN +D + L+ + +GF P+ L+ G ++ +++A+ +M
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 454 QVSEASYRML 463
++ +Y L
Sbjct: 488 SCNDYTYNTL 497
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/303 (20%), Positives = 125/303 (41%), Gaps = 2/303 (0%)
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAME 232
R + F+V+++A + +A +F ++ S P+ + ++ + + D
Sbjct: 173 RPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRAL 232
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ +M GF P T+N +D K G +A+ + +E+ S+ TTL+HG
Sbjct: 233 LVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGY 292
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
L R + +A +F+E + L P Y +I A EL +M + +
Sbjct: 293 CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPST 352
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
++ + GL+ + L+ M + +P T +L+ + C ++ LNLW
Sbjct: 353 NEFNMVIKGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEK 411
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ + G P+ L+ C G +EA + +M + + +Y L + + A
Sbjct: 412 MNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAA 471
Query: 473 NEK 475
+K
Sbjct: 472 FDK 474
>gi|449454285|ref|XP_004144886.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
gi|449472527|ref|XP_004153621.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g17140-like [Cucumis sativus]
Length = 875
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 154/350 (44%), Gaps = 26/350 (7%)
Query: 148 RISKFQSYEETLEA---FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
RI+ + LEA F M+ + +G+ K + +N++L+ FC++ +EAR++F +
Sbjct: 264 RIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTVTYNLMLEGFCSEGMFEEARAIFDSM 323
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ + ++ NI +LG SG + + +EM + +P++ +YNI + G CK G F
Sbjct: 324 KNSETLSLRSYNIWMLGLVRSGKLLEAHLILNEMAEKNIKPNLYSYNILVHGLCKYGMFS 383
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA + M P T +TL+HG I +A + EM + P++ N ++
Sbjct: 384 DARSILGLMRESGVAPDTVTYSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILL 443
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK----------- 373
SL + + A +L+ M E+ G DNVT +TM GL K+ L+ +
Sbjct: 444 HSLWKEGRASEAEDLLQMMNERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSA 503
Query: 374 -----------LYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+D G K +P + T ++ C RVD +I + P
Sbjct: 504 SLGNLGNSFIDLFDIRNNGKKCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPD 563
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
D + C +G+ AF K+M + S +Y L + L N
Sbjct: 564 SLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNSLIQGLGSEN 613
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 97/209 (46%), Gaps = 7/209 (3%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
EI G+ GS L +F ++ + R+ K L P++ T ++ G + G
Sbjct: 492 EIVSGMWTRGSASLGNLGNSFI---DLFDIRNNGKKCL----PDSITYATIIGGLCKVGR 544
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
V + EM+ + P + ++ I YCK+G A R+ +EME+ C SL+T +
Sbjct: 545 VDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEMEKKGCNKSLRTYNS 604
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI G G I + L DEM +R + P++ YN +IS L L A L+DEM +K
Sbjct: 605 LIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLKDATCLLDEMLQKG 664
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
I + T+ + K+ +L++
Sbjct: 665 ISPNIYTFRILIGAFFKACDFGAAQELFE 693
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 116/290 (40%), Gaps = 27/290 (9%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ LL +C + ++ EA V +++ PN T NILL + G + E M
Sbjct: 404 YSTLLHGYCRRGKILEANYVLREMIQVGCFPNMYTCNILLHSLWKEGRASEAEDLLQMMN 463
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-----------------------ERV 276
RG+ VT N I+G CK G A+ + M
Sbjct: 464 ERGYGLDNVTCNTMINGLCKAGNLDKAIEIVSGMWTRGSASLGNLGNSFIDLFDIRNNGK 523
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
CLP T T+I G V + +A++ EM + L PD ++ I + + L++A
Sbjct: 524 KCLPDSITYATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSA 583
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++ EME+K TY+++ GL + + + L D M E P T ++
Sbjct: 584 FRVLKEMEKKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISC 643
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL---CSRGRWEEAFE 443
++ L ++ +G P+ + +L+ C G +E FE
Sbjct: 644 LSEGGKLKDATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELFE 693
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 121/273 (44%), Gaps = 20/273 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK---LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N+L + C+ KE + +++ ++R P T N+L+ E G + + +
Sbjct: 121 YNLLFR--CSLKESRVDCVIWLYKDMAVARVKPQTYTFNLLISALCEMGYLENAREVFDK 178
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M +G +P+ + I + GYC+ G + L +EM LP+ T+I
Sbjct: 179 MSEKGCKPNEFSLGILVRGYCRAGLHSHGIDLLDEMRSSGALPNRVAYNTVISSLCGEGQ 238
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME-EKRIG---HDNV 353
+A +L ++M + L PDI +N I++L + + A + +M+ ++ +G + V
Sbjct: 239 TVEAEKLVEKMREVGLSPDIVTFNCRIAALCKSGQILEASRIFRDMQIDEEMGLPKPNTV 298
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ M G E ++D M + + + ++ V G L +L
Sbjct: 299 TYNLMLEGFCSEGMFEEARAIFDSMKNSETLSLRSYNIWMLGL------VRSGKLLEAHL 352
Query: 414 I-----DRGFCPHGHALDLLVTGLCSRGRWEEA 441
I ++ P+ ++ ++LV GLC G + +A
Sbjct: 353 ILNEMAEKNIKPNLYSYNILVHGLCKYGMFSDA 385
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 114/270 (42%), Gaps = 2/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + EA+ ++++ + +P++ + + + + G +++ EM
Sbjct: 532 YATIIGGLCKVGRVDEAKKKLLEMIGKKLSPDSLIFDTFIYNYCKQGKLSSAFRVLKEME 591
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G S+ TYN I G + + L +EM+ P++ T +I +
Sbjct: 592 KKGCNKSLRTYNSLIQGLGSENQIFEIYGLMDEMKERGIFPNVYTYNNIISCLSEGGKLK 651
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L DEM ++ + P+I + +I + + D AA EL E+ GH Y MF
Sbjct: 652 DATCLLDEMLQKGISPNIYTFRILIGAFFKACDFGAAQELF-EIALSLCGHKESLYSFMF 710
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L+ +L++ ++ K L++ C + ++D + ++D+ +
Sbjct: 711 NELLAGGETLKAKELFEAALDRSLALKNFLYRDLIEKLCKDGKLDDASFILHKMMDKQYS 770
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ ++ L RG A E +++M+
Sbjct: 771 FDPASFMPVIDELGKRGSKHAADEFAERMM 800
>gi|449455613|ref|XP_004145547.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g43820-like [Cucumis sativus]
Length = 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 102/457 (22%), Positives = 197/457 (43%), Gaps = 24/457 (5%)
Query: 23 LFSTTTQSS-EIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLV-------ENVLG 74
+++T ++S E + R ++ P++ L LQ L T + L ++V+
Sbjct: 89 VYNTLKENSIEKQMPVRAVDGFLLPEEKLRGVFLQKLNGKTAIEHALANTDVILSQDVVS 148
Query: 75 RLFAAHSNGLKAL-EFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH 133
++ S G +A+ FF + ++ P ++ L L R +FD +++ ++ R
Sbjct: 149 KVLNTGSLGSEAMVTFFYWAIKQPSIPKDASSYNIILKALGRRGFFDSMMDVLYNMTREG 208
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
TL+ +SI++ + K + L+ F ++ +G+ K +E N+LLQ C +
Sbjct: 209 VEA-TLEMVSIVVDSLVKGHQVSKALQFFRNLKE---IGL-KCDTETLNILLQCMCRRSH 263
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ A S F N T NI++ G+ G +E M L GF P +T+
Sbjct: 264 VGAANSFFNLTKGNIPFNVMTYNIVIGGWSRYGRHGEVEQMLKAMELDGFSPDCLTHTYL 323
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+ + DA+++F++M+ C P + +I + + Q ++ M
Sbjct: 324 IECLGRANQIDDAVKIFDKMDENGCTPDVDAYNAMISNFICIGDFDQCLTYYERMLSNRC 383
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD+ Y+ +I+ ++ + + A+E+ DEM + I T F L S G
Sbjct: 384 EPDMNTYSNLITGFLKAKKVADALEMFDEMVARIIPTTGAI--TSFIQLSCSYGPPHAAM 441
Query: 374 LYDRMIE--GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L + G + K ++LM+ + + LN+W + + G+ P + +
Sbjct: 442 LIYKKARKVGCRISKNAYKLLLMRLSLFG-KFGMLLNIWNEMQESGYDPDVETYEHAIDC 500
Query: 432 LCSRGRWEEAF----ECSKQ-MLVRRRQVSEASYRML 463
LC G+ E A EC +Q RR S+ + ++L
Sbjct: 501 LCKTGQLENAVLVMEECLRQGFFPSRRTRSKLNNKLL 537
>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
Length = 567
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/400 (22%), Positives = 180/400 (45%), Gaps = 32/400 (8%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
P + + ++ + F QA++ ++ + + H L T+ + + ++ + K + + +
Sbjct: 74 VPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNH-CLPTVVTYTNIVDGLCKAERTRDAV 132
Query: 160 EAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+ D M R G +NV+++ C ++++ EA+ + ++ R + P+ T
Sbjct: 133 KLLDEM--------RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVT 184
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N + G + V F M + P VV+Y I+G CK G A R+ + M
Sbjct: 185 YNSFIKGLCKCDRVDEARKFLARMPVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMS 241
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P + T ++LI G + +A L D M K +P++ AYN+++ +L R +
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM-- 392
A +++ EME + D V+Y+ GL K+ ++ ++DRM+E P + M
Sbjct: 302 KAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLI 361
Query: 393 --------LMKFFCVNFRVDLGLNLWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEAFE 443
L+ C R D L+ ++D C P ++++ C R + ++A +
Sbjct: 362 VDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQ 421
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
KQML + + ++ +L L +++L D + M+
Sbjct: 422 IHKQML-EKNCCNVVTWNILVHGLC---VDDRLSDAETML 457
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 113/270 (41%), Gaps = 4/270 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL + +A +VF +++ + P+ T ILL G S + M
Sbjct: 10 YNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMK 69
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P YN I GY K FG A + EM + CLP++ T T ++ G
Sbjct: 70 EMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTR 129
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L DEM + P+I YN ++ L R L+ A ++++EM + D VTY++
Sbjct: 130 DAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFI 189
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K ++ K RM P + ++ C + +D + ++ +RG
Sbjct: 190 KGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCT 246
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P L+ G C G E A ML
Sbjct: 247 PDVVTYSSLIDGFCKGGEVERAMGLLDSML 276
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 133/312 (42%), Gaps = 13/312 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ FC E++ A + +L PN N LL G + E EM
Sbjct: 252 YSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEME 311
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA------- 292
RGF P VV+YN IDG CK A +F+ M C P+ + + LI
Sbjct: 312 RRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLL 371
Query: 293 -GLVRN--IHQARQLFDE-MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
GL + +A LF + + ++ +PD+ YN M+ S + R ++ A+++ +M EK
Sbjct: 372 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC 431
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT++ + GL L + M++ F+P T L+ C + L
Sbjct: 432 CN-VVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 490
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
L+ + G P L+TGL EEA+ +++ RR + + +L R L
Sbjct: 491 LFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLK 550
Query: 469 QANANEKLEDLD 480
N K E +D
Sbjct: 551 LLNKPRKAEVVD 562
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/310 (21%), Positives = 135/310 (43%), Gaps = 31/310 (10%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
++ D F K + M D +L P+++ S+ L R+ E+
Sbjct: 252 YSSLIDGFCKGGEVERAMGLLDSMLKL-----GCRPNMVAYNSLLGALHRLGHIGKAEDM 306
Query: 159 LEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
L +R R F + +N + C + +K+A++VF +++ R PN +
Sbjct: 307 LVEMER---------RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357
Query: 216 NILLL----------GFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
++L++ G + G A +F + + P V YN+ +D +CK+
Sbjct: 358 SMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQID 417
Query: 265 DAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A+++ ++M E+ C ++ T L+HG + + A + M PD Y +
Sbjct: 418 KALQIHKQMLEKNCC--NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTL 475
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ ++ +C AA+EL +E + D VTY + GL+ + E L+ +++E ++
Sbjct: 476 VDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRW 535
Query: 384 VPKTRTVVML 393
VP +T+ +L
Sbjct: 536 VPDDKTLGLL 545
>gi|414591144|tpg|DAA41715.1| TPA: hypothetical protein ZEAMMB73_506058 [Zea mays]
Length = 521
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 138/313 (44%), Gaps = 21/313 (6%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + +I++ +S + + F+ M+ VG + ++ A+C M+ A
Sbjct: 200 TVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYL----YTAVINAYCRAGNMRRA 255
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
V + + PN +T +L+ GF + G + A EM +M +G + + +N IDG
Sbjct: 256 AKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDG 315
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
YC+KG DA+++ ME++ ++ T TL G + + + P+
Sbjct: 316 YCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACG----------------LCRMGVVPN 359
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
Y +IS + D+ A L EM EK +TY M G K + +
Sbjct: 360 YVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRK 419
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + FVP T L+ CVN +VD+ L L+ + RG P+ A L++GL G
Sbjct: 420 EMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEG 479
Query: 437 RWEEAFECSKQML 449
R E AF+ ML
Sbjct: 480 RSEAAFQLYDDML 492
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 82/153 (53%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T L+ + GD+ + EM +G PSV+TY++ I GY KKG +A R
Sbjct: 358 PNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERF 417
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+EME+ +P + T +L+HG + + A +LF+EM +R +P++ AY A+IS L +
Sbjct: 418 RKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAK 477
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
AA +L D+M + + D+ Y + L
Sbjct: 478 EGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSL 510
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 78/148 (52%), Gaps = 1/148 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C +M EAR +F ++ + A P+ T ++++ G+ + G + E F EM
Sbjct: 363 YTTLISIHCKDGDMVEARRLFREMAEKGATPSVLTYSVMIHGYAKKGRIREAERFRKEME 422
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF P V TY + G+C G A++LFEEM++ P++ T LI G
Sbjct: 423 KKGFVPDVYTYASLVHGHCVNGKVDVALKLFEEMKQRGTEPNVVAYTALISGLAKEGRSE 482
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSL 327
A QL+D+M K L PD Y+A++ SL
Sbjct: 483 AAFQLYDDMLKAGLIPDDSLYSALVGSL 510
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 107/245 (43%), Gaps = 20/245 (8%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDV-------TAME 232
+ VL++ FC +M+ A + + + N+ + N ++ G+ G V AME
Sbjct: 274 YGVLIKGFCKIGQMEAAEMLLADMQGQGVGLNQIIFNTMIDGYCRKGMVDDALKIKAAME 333
Query: 233 MFYHEMVLR------------GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
E+ + G P+ VTY I +CK G +A RLF EM P
Sbjct: 334 KIGVELNIYTYNTLACGLCRMGVVPNYVTYTTLISIHCKDGDMVEARRLFREMAEKGATP 393
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
S+ T + +IHG I +A + EM K+ PD+ Y +++ ++ A++L
Sbjct: 394 SVLTYSVMIHGYAKKGRIREAERFRKEMEKKGFVPDVYTYASLVHGHCVNGKVDVALKLF 453
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+EM+++ + V Y + GL K E +LYD M++ +P L+ +
Sbjct: 454 EEMKQRGTEPNVVAYTALISGLAKEGRSEAAFQLYDDMLKAGLIPDDSLYSALVGSLHTD 513
Query: 401 FRVDL 405
R D+
Sbjct: 514 NRKDV 518
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 95/222 (42%), Gaps = 2/222 (0%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
++++ G +SG V +M G + + YN +D Y ++ G + E ME
Sbjct: 135 SVVVDGLCKSGRVDDARRLLDDMPRHGVSLNALCYNSLLDCYVRQKDDGRVQEILEIMEN 194
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
++ T T L+ R+I + LF+EM N+ D+ Y A+I++ R ++
Sbjct: 195 EGIEATVGTYTILVDSLSTARDISKVEALFNEMKANNVVGDVYLYTAVINAYCRAGNMRR 254
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-MLM 394
A +++DE + + TY + G K +E L M +G+ V + + ++
Sbjct: 255 AAKVLDECVGNGVEPNERTYGVLIKGFCKIGQMEAAEMLLADM-QGQGVGLNQIIFNTMI 313
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+C VD L + + G + + + L GLC G
Sbjct: 314 DGYCRKGMVDDALKIKAAMEKIGVELNIYTYNTLACGLCRMG 355
>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 504
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 11/282 (3%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSE 179
+ +ELM Q P+++T S+ L+ + + + F+ M ER I K
Sbjct: 205 KIFELMIK-QGEAPNIVTYNSL---LNGLCLHHQMDHAVRLFEVMVERGI-----KIDVI 255
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ +CT + +EA ++F K+ P+ T ILL ++G + + ++ M
Sbjct: 256 SYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNM 315
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G PS+ TY + +DG CK GC +A+ +F ++ + PS++ + LI G R
Sbjct: 316 QICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRW 375
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A ++FDE+P L P+I YN MI+ L + L A L +MEE D ++++ +
Sbjct: 376 ESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFI 435
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
G ++ + ++ + RM E F P +ML+ + +
Sbjct: 436 IRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAAD 477
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 1/291 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++ + C + +F ++++ PN + L+ G G + + EMV
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMV 141
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + +V+TYN I C+ G + +A R F +M LP + T TTLI +
Sbjct: 142 SQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQ 201
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++F+ M K+ P+I YN++++ L ++ A+ L + M E+ I D ++Y+T+
Sbjct: 202 EAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLI 261
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G S E L+ +M + P T +L+K N R+ L+ + G
Sbjct: 262 NGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQS 321
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
P +L+ GLC G EEA + + + + + S Y +L + QA
Sbjct: 322 PSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQA 372
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/325 (23%), Positives = 141/325 (43%), Gaps = 40/325 (12%)
Query: 206 SRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVV---------------- 248
S + PN T++ L+ G G V A+E+F +M GF+ ++
Sbjct: 3 SGYQPNLVTVSTLVKGMCFEGKVMDALELF-DKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 249 -------------------TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
TY + ID CK G +++F EM + P++ ++LI
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G V + +A LFDEM + +K ++ YN++I + R A +M + I
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D VT+ T+ L K ++ K+++ MI+ P T L+ C++ ++D + L
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRL 241
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ +++RG + + L+ G C+ G+ EEA ++M S +Y +L + L Q
Sbjct: 242 FEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQ 301
Query: 470 ANANEKLEDLDRMIKNLQAVLPPPT 494
N ++ + N+Q P+
Sbjct: 302 ---NGRIRTAKELFNNMQICGQSPS 323
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 151/334 (45%), Gaps = 9/334 (2%)
Query: 157 ETLEAFDRMEREIFVG-IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-T 214
+ LE FD+M R F G I +G L+ A ++ + A + ++LS N T
Sbjct: 27 DALELFDKMTRSGFQGDILLYG-----YLINALRKTRQARRAVELHRRMLSEICSGNFFT 81
Query: 215 MNILLLGFKESG-DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+++ + G + ++MF EM+ G P+V+ Y+ I+G C+ G +A+ LF+EM
Sbjct: 82 YGLVIDSLCKDGLAIKGLKMF-REMINMGICPNVIVYSSLINGLCRVGKLREAVNLFDEM 140
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
++ T +LIH + +A + F +M + PD+ + +I L + +
Sbjct: 141 VSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKV 200
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A ++ + M ++ + VTY+++ GL ++ +L++ M+E + L
Sbjct: 201 QEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTL 260
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +C + + + + L+ + P +L+ L GR A E M + +
Sbjct: 261 INGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ 320
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
S +Y +L L + E+ D+ R +K+++
Sbjct: 321 SPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIK 354
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 65/154 (42%)
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K +P++ + ++ + + A+EL D+M D + Y + L K+
Sbjct: 2 KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L+ RM+ T +++ C + GL ++ +I+ G CP+ L+
Sbjct: 62 RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
GLC G+ EA +M+ + + + +Y L
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSL 155
>gi|255660854|gb|ACU25596.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 418
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 147/353 (41%), Gaps = 46/353 (13%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A++ F+ T QH P D K L L RYF W+ V + +P+ L
Sbjct: 85 AVQCFRLTKQHKIRVPF-DTCRKVLEHLMEFRYFKLVWDFYKEVLECGYPASLYF----- 138
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
FN+L+Q FC + EM+ A+SVF
Sbjct: 139 ------------------------------------FNILMQRFCKEGEMRLAQSVF-DA 161
Query: 205 LSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ P+ + N L+ G+ + GD+ M G +P V TY+I I+G CK+G
Sbjct: 162 ITKWGLRPSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGK 221
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A LF EM +P+ T TTLIHG + A +++ +M + L PD+ YN
Sbjct: 222 LDEANELFNEMLDNGLVPNGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNT 281
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L + +L +L+DEM + D ++Y T+ G K LE +L ++MI+
Sbjct: 282 LIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQES 341
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
L+ C R + ++ G P +++ C +
Sbjct: 342 IRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKK 394
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TLI+G
Sbjct: 123 FYKEVLECGYPASLYFFNILMQRFCKEGEMRLAQSVFDAITKWGLRPSVVSFNTLINGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M +PD+ Y+ +I+ L + L+ A EL +EM + + + V
Sbjct: 183 KLGDLDEGFRLKSAMHASGAQPDVYTYSILINGLCKEGKLDEANELFNEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNTLIYGLCKKGELKQVHDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I G P + L+ G C G E A E +M+ ++ + +Y L L +
Sbjct: 303 IMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQESIRLDDVAYTALISCLCREG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RAGDAEKMLREMLSVGLKP 379
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 101/255 (39%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L S H P + T SI+++ + K +E
Sbjct: 169 PSVVSFNTLINGYIKLGDLDEGFRLKSAMHASGAQPDVYTY---SILINGLCKEGKLDEA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E F+ M V F L+ C +++ A ++ ++LS+ +P+ T N
Sbjct: 226 NELFNEMLDNGLVP----NGVTFTTLIHGHCKNEKVDLAMEIYKQMLSQGLSPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG---------------- 261
L+ G + G++ + EM++ G +P ++Y IDG CK+G
Sbjct: 282 LIYGLCKKGELKQVHDLIDEMIMNGLKPDKISYTTLIDGSCKEGDLEIALELRNKMIQES 341
Query: 262 -------------CF------GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
C GDA ++ EM V P T T +I+ R+ A
Sbjct: 342 IRLDDVAYTALISCLCREGRAGDAEKMLREMLSVGLKPDNGTYTMIINEFCKKRDSKTAS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLLREMQRDGPVPGV 416
>gi|294461967|gb|ADE76539.1| unknown [Picea sitchensis]
Length = 486
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 168/416 (40%), Gaps = 55/416 (13%)
Query: 75 RLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH- 133
+L A+ ++ L A+E F+ + P F + + + L R R F L+ +++
Sbjct: 105 KLIASQTDALLAMEIFEVASRQPGFKHSYSTYHTLICKLGRARQFKTMEGLIQQMRKDGC 164
Query: 134 ---PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQ 186
P L ++ + E ++AF +M +FG E FNVLL
Sbjct: 165 PYTPGLFV-----DIIEIYGEVGMPNEAIKAFHQM--------LEFGYEPLAKHFNVLLI 211
Query: 187 AFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
K ++ A S+F KL HE G P+
Sbjct: 212 VLIEHKCLETALSLFKKL-------------------------------HEF---GISPN 237
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
TYNI I +C A LF +M + C+P ++T + L+ G + A + D
Sbjct: 238 TRTYNILIRAHCHSDKLSHAYFLFNKMHKQGCIPDVETYSILMQGLCRKSQVKTALGVLD 297
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM + PD YN +++SL R +L A L+ +M+ D + Y+T+ G +
Sbjct: 298 EMLNKGYVPDALTYNTLLNSLCRKMNLREAYRLLSKMKVMGCNPDVINYNTVITGFCREG 357
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
C++ M E +P + L+ C + D + +I GF PH
Sbjct: 358 RALDACQILRDMPENGCLPNALSYRTLVNGLCNEGKFDEAKDFVEEMISNGFIPHISIYH 417
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
LL+TGLC+ G+ EA E M + E+++ +L + + + E E +D++
Sbjct: 418 LLITGLCNEGKVGEACEVLVMMTKQTLAPHESTWSVLLMRICEDSQTEARELVDKL 473
>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
Length = 555
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 94/381 (24%), Positives = 171/381 (44%), Gaps = 20/381 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F + L RM+++ L ++ S L S++I+++ + +
Sbjct: 89 PSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVL-SLTILINCFCRLCHVDYGFS 147
Query: 161 AFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ I K G E F+ L+ FC + ++ A +F +++R + PN +
Sbjct: 148 VLGK--------IIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSY 199
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+I++ G G T + M + G P VV YN +D CK +A+ +F +M+
Sbjct: 200 SIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKG 259
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
LP++ T T+LIHG + +A L +EM N+ PD+ A++ +I + + +++
Sbjct: 260 TGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSE 319
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A ++ M E + D TY+T+ G + K+++ MI +P + +L+
Sbjct: 320 ARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVN 379
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+C R+D L+ + RG P + + L++GLC R EA E K M
Sbjct: 380 GYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPP 439
Query: 456 SEASYRML------QRYLVQA 470
+ +Y +L Q YL QA
Sbjct: 440 NLVTYSILLDCLSKQGYLDQA 460
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/377 (23%), Positives = 156/377 (41%), Gaps = 31/377 (8%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSM 142
+A+E F + + P ++ + L R+ + +L+ H V P ++ ++
Sbjct: 179 RAIELFDVMVARG-YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTI 237
Query: 143 SIMLSRISKFQSYEETLEAFDRME-----------REIFVGIRKFGSEEFNVLLQAFCTQ 191
+ R+ K + E + F +M+ + G+R G + +AF
Sbjct: 238 ---VDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWK-----EAFGLL 289
Query: 192 KEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
EMK P+ ++L+ + G+V+ + M G P V TYN
Sbjct: 290 NEMKGGN---------IMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATYN 340
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
++GYC + +A ++FE M +P + + + L++G + I +A+QLFDEM R
Sbjct: 341 TLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHR 400
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
L PD +YN +IS L + R A EL +M + VTY + L K L+
Sbjct: 401 GLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQA 460
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L+ M P T +++ C + L+ L +G P+ + G
Sbjct: 461 MGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDG 520
Query: 432 LCSRGRWEEAFECSKQM 448
+C G +EA + +QM
Sbjct: 521 VCKGGLLDEAHKAFRQM 537
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 82/186 (44%), Gaps = 11/186 (5%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S SI+++ K + +E + FD M + + +N L+ C + EA +
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIP----DTVSYNTLISGLCQARRPLEAEEL 428
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F + S + PN T +ILL + G + + M G +P +VTYNI IDG CK
Sbjct: 429 FKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCK 488
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRNIHQARQLFDEMPKRNLKPD 316
G F DA LF E+ P+ T I G GL+ H+A F +M K + P
Sbjct: 489 YGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKA---FRQMEKDDCSPA 545
Query: 317 IGAYNA 322
G N
Sbjct: 546 QGCING 551
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
F++L+ +C K + EA+ +F ++ R P+ + N L+ G ++ E + +M
Sbjct: 373 SFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKDM 432
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G+ P++VTY+I +D K+G AM LF ME P L T +I G
Sbjct: 433 HSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKF 492
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
AR+LF E+ + L+P+ I + + L+ A + +ME+
Sbjct: 493 KDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEK 539
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 72/155 (46%)
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
RNI+ A F+ M N P I + + S+L+R + + L +ME I HD ++
Sbjct: 70 RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + ++ + ++I+ P T L+ FC+ ++ + L+ ++
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
RG+ P+ H+ +++ GLC G+ E + + M V
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKV 224
>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
Length = 814
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 168/390 (43%), Gaps = 11/390 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA + FK +Q P + +H L + R D+A + + + P+ T ++
Sbjct: 237 KACDLFKEMVQR-GIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ S ++E + F M R+ + FN+L+ + C ++KEAR VF
Sbjct: 296 ---IYGYSSTGQWKEAVRVFKEMRRQSILP----DVVTFNMLMGSLCKYGKIKEARDVFD 348
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + P+ + NI+L G+ G + M + M+ G P + T+N+ I Y G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
AM +F EM P++ T TT+I + + A + F++M + + PD AY+
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L A EL+ E+ + D V + ++ L K + ++D +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNV 528
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P MLM +C+ +++ L ++ ++ G P+ LV G C GR +E
Sbjct: 529 GLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEG 588
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++ML + + S Y ++ L +A
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAG 618
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 127/287 (44%), Gaps = 3/287 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFA---PNNKTMNILLLGFKESGDVTAMEMFYH 236
+++LL++ C Q + +A + + A P+ N ++ GF + GDV +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV RG P VTY+ + CK A +M LP+ T LI+G
Sbjct: 244 EMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTG 303
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+A ++F EM ++++ PD+ +N ++ SL + + A ++ D M K D +Y+
Sbjct: 304 QWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
M G L + L+D M+ P T +L+K + +D + ++ + D
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P+ ++ LC G+ ++A E QM+ + + +Y L
Sbjct: 424 GVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 146/351 (41%), Gaps = 20/351 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSY 155
P F + A D+A + + + R H P++LT ++ L RI K
Sbjct: 390 IAPVICTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPNVLTYTTVIAALCRIGKM--- 445
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
++ +E F++M + V K+ ++ L+Q FCT + +A+ +L+S N +
Sbjct: 446 DDAMEKFNQMIDQ-GVAPDKYA---YHCLIQGFCTHGSLLKAK----ELISEIMNNGMHL 497
Query: 216 NILLLG-----FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+I+L + G V + + V G P+ V Y++ +DGYC G A+R+F
Sbjct: 498 DIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVF 557
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ M P+ TL++G + I + LF EM ++ +KP YN +I L
Sbjct: 558 DAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEA 617
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
A EM E I + TY + GL K+ + L+ + T+
Sbjct: 618 GRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITL 677
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ RV+ +L+ + G P +++T L G EEA
Sbjct: 678 NTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEA 728
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/224 (23%), Positives = 104/224 (46%), Gaps = 3/224 (1%)
Query: 216 NILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N LL GF E+ A+++ H G P V +Y+I + C +G G A L M
Sbjct: 150 NHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMA 209
Query: 275 R--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
C P + T+I G ++++A LF EM +R + PD Y++++ +L + R
Sbjct: 210 EGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARA 269
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A + +M K + +N TY+ + +G + + +++ M +P T M
Sbjct: 270 MDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNM 329
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
LM C ++ +++ + +G P + ++++ G ++G
Sbjct: 330 LMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKG 373
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/381 (21%), Positives = 157/381 (41%), Gaps = 30/381 (7%)
Query: 20 LALLFSTTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAA 79
+A L +E+ ++I+ PD+ + L+Q F
Sbjct: 436 IAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQG-------------------FCT 476
Query: 80 HSNGLKALEFFKFTLQHPHFTPTP--DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLL 137
H + LKA E + + + L L R+ ++L +V HP+ +
Sbjct: 477 HGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVG-LHPTAV 535
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
S+++ E+ L FD M + GI + L+ +C + E
Sbjct: 536 VY---SMLMDGYCLVGKMEKALRVFDAM---VSAGIEP-NDVVYGTLVNGYCKIGRIDEG 588
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
S+F ++L + P+ NI++ G E+G ++ +HEM G + TY+I + G
Sbjct: 589 LSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRG 648
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
K CF +A+ LF+E+ + + T+ T+I G R + +A+ LF + + L P
Sbjct: 649 LFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPC 708
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ Y+ MI++LI+ + A ++ M+ D+ + + L+K + +
Sbjct: 709 VVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLS 768
Query: 377 RMIEGKFVPKTRTVVMLMKFF 397
++ E F + T ++L+ F
Sbjct: 769 KIDERNFSLEHLTTMLLVDLF 789
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 89/224 (39%), Gaps = 41/224 (18%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR-LFEEMERVACLPSLQTITTLIHGA 292
F+ +++ G R ++ N + G+C+ +A+ L + C+P + + + L+
Sbjct: 133 FFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSL 192
Query: 293 GLVRNIHQARQLFDEMPKRN--LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
QA L M + PD+ AYN +I + D+N A +L EM ++ I
Sbjct: 193 CDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPP 252
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
D VTY ++ L K+ ++ +M+ +P N W
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP----------------------NNW 290
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
Y + L+ G S G+W+EA K+M RRQ
Sbjct: 291 TY-------------NNLIYGYSSTGQWKEAVRVFKEM---RRQ 318
>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Vitis vinifera]
Length = 572
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 95/407 (23%), Positives = 175/407 (42%), Gaps = 36/407 (8%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER----------- 167
D A L + + R P ++ S +L+ I++ + Y L + +M+
Sbjct: 35 IDDALSLFNRMLRMRPPP-SIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93
Query: 168 ----------------EIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+ I K G + F L++ C + ++ EA +F K+
Sbjct: 94 ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
F P+ T L+ G + G+ + F M R RP+VV Y+ ID CK +A
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ LF +M P+ T ++LIHG ++ + +A +LF M R + PD +N ++ +
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + + A ++D M + + D VTY+++ G S + ++D M+ VP
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ L+ +C +D + L+ + +G P + L+ GLC GR +A
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+M+V + +YR+L YL + N +L + ++K ++ P
Sbjct: 394 EMVVYGQIPDLVTYRILFDYLCK---NHRLAEAMVLLKVIEGTNLDP 437
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 95/404 (23%), Positives = 168/404 (41%), Gaps = 15/404 (3%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
N A+ F + +++ + PT + + L + R +A L S + + P+ T
Sbjct: 173 GNTSTAIRFLR-SMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFT 231
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKE 196
S+ + + ++E + F M RK ++ FN L+ A C + + +
Sbjct: 232 YSSL---IHGLCILGHWKEAIRLFYAMIH------RKIMPDQLTFNTLVDALCKEGMVVK 282
Query: 197 ARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A V V + S P+ T N L+ G ++ + MV +G PSV++Y I+
Sbjct: 283 AHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLIN 342
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
GYCK AM LFEEM + +P T TLIHG V + A LF EM P
Sbjct: 343 GYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIP 402
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
D+ Y + L + L AM L+ +E + D Y + G+ ++ LE L+
Sbjct: 403 DLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLF 462
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
++ P RT +++ C + L+G + + G P+ +L+ G
Sbjct: 463 SKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRN 522
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
A + ++ML R + ++ +L L ++ ++ +
Sbjct: 523 NETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQSVKQI 566
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 64/154 (41%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
V I A LF+ M + P I ++ +++S+ R + + + L +M+ I H+ T
Sbjct: 32 VNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYT 91
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ + + L + +++ + P T T L++ CV ++ L L+ +
Sbjct: 92 LNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMT 151
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
GF P L+ GLC G A + M
Sbjct: 152 GEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185
>gi|255660836|gb|ACU25587.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 418
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/365 (25%), Positives = 147/365 (40%), Gaps = 44/365 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
ALE F+ T +H + P D K L +++YF W + + +P+ L
Sbjct: 85 ALECFRLTREHKFWVPF-DTCRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYF----- 138
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
FN+L+ FC + EM+ A+SVF ++
Sbjct: 139 ------------------------------------FNILMHRFCKEGEMRLAQSVFDEI 162
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
P+ + N L+ G+ GD+ M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF EM +P+ T TTLI G +I A + + EM ++ PD+ YN +
Sbjct: 223 NDANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
L+ C + + ++ G P +++ C +G + +
Sbjct: 343 RLDDVAYTALISGLCREGQSVDAEKMLREMLSVGLKPDNGTYTMIINEFCKKGDVKTGSK 402
Query: 444 CSKQM 448
K+M
Sbjct: 403 LLKEM 407
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 171/399 (42%), Gaps = 27/399 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+PT F TLH ++ M H TH L K++ I++SR K + +
Sbjct: 3 SPTNSTFRHTLH----------SYCTMIHFLCTHQMLPEAKNLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKT 214
E LEA +++V F+ L+ A+ + +A F + +F T
Sbjct: 53 EAILEAKGAQRSDVYV---------FSGLITAYLESGFLHDALECFRLTREHKFWVPFDT 103
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+L F + + FY E++ G+ S+ +NI + +CK+G A +F+E+
Sbjct: 104 CRKVLEHFMKLKYFKLVWGFYKEILECGYPASLYFFNILMHRFCKEGEMRLAQSVFDEIT 163
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ PS+ + TL++G + ++ + +L M ++PD+ Y+ +I+ L + +N
Sbjct: 164 KWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMN 223
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A EL EM + + VT+ T+ G K+ ++ + Y M+ F P T L+
Sbjct: 224 DANELFGEMIGNGLVPNGVTFTTLIDGHCKTGSIDLAMETYKEMLRQGFSPDLITYNTLI 283
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C + +L + +G P L+ G C G E A K+M+ +
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALYYRKRMIKENIR 343
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
+ + +Y L L + + D ++M++ + +V P
Sbjct: 344 LDDVAYTALISGLCREGQS---VDAEKMLREMLSVGLKP 379
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 47/107 (43%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G G E E
Sbjct: 314 YTTLIDGSCKEGDLETALYYRKRMIKENIRL--DDVAYTALISGLCREGQSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P TY + I+ +CKKG +L +EM+R +P + T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKGDVKTGSKLLKEMQRDGHVPCVVT 418
>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
Length = 556
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 103/407 (25%), Positives = 180/407 (44%), Gaps = 36/407 (8%)
Query: 85 KALEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLK 140
+ALEF + F+ PD F +H L + DQA +L +++ R +P + T
Sbjct: 80 RALEFLR---ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYN 136
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE-----FNVLLQA-FCTQKEM 194
++ +S + K + E+ E + M IR+ G +N L+ A C ++
Sbjct: 137 TV---ISGLCKSGNLEKARELLEEM-------IRRGGKSAPDIVTYNTLINAGICKDGDV 186
Query: 195 KEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+EA + + L+ AP+ T N ++ +G V M P +VT+N
Sbjct: 187 EEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTL 243
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
+DG+CK G A+ + EEM R LP + T T L++G V + A L +E+ ++
Sbjct: 244 LDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGY 303
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV---------TYHTMFFGLMK 364
PD+ AY +++ L + ++ A +L+ EM + I + V TY+ + GL+K
Sbjct: 304 IPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ L ++ +VP T L+ C RV +L + G P+
Sbjct: 364 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVT 423
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
L +V GLC GR ++A+ +M +R + Y L L +++
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSD 470
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/405 (22%), Positives = 165/405 (40%), Gaps = 47/405 (11%)
Query: 2 LLAKRLKRSDK-FPGISDRLALLFSTTTQSSEIERITRIIND----HPFPDQPLHPTLLQ 56
LL + ++R K P I L+ + + ++E I++ P PD + +++
Sbjct: 154 LLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIH 213
Query: 57 HLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARM 116
L V GR+ ++A E K P F L +
Sbjct: 214 ALC------------VAGRV-------VEAAEILKTMSCSPDLV----TFNTLLDGFCKA 250
Query: 117 RYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
+A E++ + R + P ++T + L R+ + Q AF +E + G
Sbjct: 251 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQV------AFYLLEEIVRQGYI 304
Query: 175 KFGSEEFNVLLQAFCTQKEMKEA---------RSVFVKLLS-RFAPNNKTMNILLLGFKE 224
+ L+ C E++EA R + +++S P T NI+L G +
Sbjct: 305 P-DVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIK 363
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G ++ ++V RG+ P VVTYN IDG CK +A L +EM + C P+ T
Sbjct: 364 DGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVT 423
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+ +++ G V + A L EM ++ P++ Y ++I L + ++ A ++D M
Sbjct: 424 LGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMR 483
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ + D+ Y + ++ + +YD M+ F+P T
Sbjct: 484 GQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 87/320 (27%), Positives = 134/320 (41%), Gaps = 38/320 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL V+ LL S +PN T IL+ G ++G T F +
Sbjct: 30 YNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLRALD 89
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V +N I G K G A++LFE ME P + T T+I G N+
Sbjct: 90 EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLE 149
Query: 300 QARQLFDEMPKRNLK--PDIGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNVTY 355
+AR+L +EM +R K PDI YN +I++ I C+ D+ A+E++D M+ D +TY
Sbjct: 150 KARELLEEMIRRGGKSAPDIVTYNTLINAGI-CKDGDVEEALEILDGMKLAGPAPDVITY 208
Query: 356 HTMFFGLMKS-----------------------SGLEGVCK---------LYDRMIEGKF 383
+++ L + + L+G CK + + M
Sbjct: 209 NSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENI 268
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T +L+ C +V + L ++ +G+ P A LV GLC G EEA +
Sbjct: 269 LPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHK 328
Query: 444 CSKQMLVRRRQVSEASYRML 463
K+M R S M+
Sbjct: 329 LVKEMSAREILAEMVSINMV 348
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 96/210 (45%), Gaps = 3/210 (1%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G++ V +YN +D K G ++++++ C P+L T LI G +A
Sbjct: 22 GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ + + ++ PD+ +N +I L + + + A++L + ME R+ D TY+T+ G
Sbjct: 82 LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141
Query: 362 LMKSSGLEGVCKLYDRMIE--GKFVPKTRTVVMLMKF-FCVNFRVDLGLNLWGYLIDRGF 418
L KS LE +L + MI GK P T L+ C + V+ L + + G
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P + ++ LC GR EA E K M
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM 231
>gi|449445529|ref|XP_004140525.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
gi|449523383|ref|XP_004168703.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g01570-like [Cucumis sativus]
Length = 803
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 116/481 (24%), Positives = 203/481 (42%), Gaps = 61/481 (12%)
Query: 34 ERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK---ALEFF 90
E TR + H P HP LLQ L HS L L+FF
Sbjct: 41 ESGTRTLQHHSLPIS--HPLLLQIL---------------------HSRSLNPSHKLDFF 77
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
K+ P+F +P + + HIL R Y + L+ ++R S+ + + ++L
Sbjct: 78 KWCSLAPNFNHSPSTYSQIFHILCRSGYLHEVPPLLDSMKRDGVSVDS-HTFKVLLDAFI 136
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS---- 206
+ Y+ LE D ME +G +N +L A + ++ A S+F KLL
Sbjct: 137 RSGKYDAALEILDHMED---LGT-SLELNTYNSVLVALLRKNQVGLALSIFFKLLDGFNN 192
Query: 207 -----------RFAPNNKTMNILLLGFKE-SGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
F PN+ N LL+ ++ V ++F + F SV YNI I
Sbjct: 193 GGQVDSAATTFHFLPNSLACNELLVALRKLDMRVEFKKVFDKLRAIESFEFSVYGYNICI 252
Query: 255 DGYCKKGCFG---DAMRLFEEMERVACL-----PSLQTITTLIHGAGLVRNIHQARQLFD 306
+ GC+G A+ LF+EM+ + + P L T ++IH LV + A +++
Sbjct: 253 YAF---GCWGYLDTALSLFKEMKEKSLVSESFSPDLCTYNSIIHVLCLVGKVKDALIVWE 309
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
E+ +PD Y +I + ++ A + +EME + D + Y+++ GL K+
Sbjct: 310 ELKGSGHEPDAFTYRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKAR 369
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+ C+L+D+M++ T +L+ N R + G L+ L +G
Sbjct: 370 KVTEACQLFDKMVQEDVRASPWTYNILIDGLFRNGRAEAGYTLFCDLKKKGQIVDAVTYS 429
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
+++ LC EEA + ++M R V + L L+ + + + L+R++K++
Sbjct: 430 IIILQLCKERLLEEALQLVEEMEARGFVVDLITITSL---LIAMHKQGQWDGLERLMKHI 486
Query: 487 Q 487
+
Sbjct: 487 R 487
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 66/152 (43%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P TYN + + KKG F A +F EM C + T +I G G + A
Sbjct: 628 GVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPADIATYNVIIQGLGKMGRADLA 687
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ +++ ++ DI YN +I++L + ++ +L +M I D VT++T+
Sbjct: 688 SSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFGQMRNSGINPDVVTFNTLIEV 747
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
K+ L+ K M++ P T L
Sbjct: 748 HSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTL 779
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/208 (22%), Positives = 81/208 (38%), Gaps = 36/208 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +++Q C M +A +F ++ + P+ N LL G ++ VT + +MV
Sbjct: 323 YRIIIQGCCKSCRMDDATMIFNEMEYNGLIPDTIVYNSLLNGLFKARKVTEACQLFDKMV 382
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R S TYNI IDG + G
Sbjct: 383 QEDVRASPWTYNILIDGLFRNG-----------------------------------RAE 407
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF ++ K+ D Y+ +I L + R L A++L++EME + D +T ++
Sbjct: 408 AGYTLFCDLKKKGQIVDAVTYSIIILQLCKERLLEEALQLVEEMEARGFVVDLITITSLL 467
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ K +G+ +L + EG VP
Sbjct: 468 IAMHKQGQWDGLERLMKHIREGDLVPNV 495
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 82/200 (41%), Gaps = 4/200 (2%)
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ KG A +LFE + P T +++ HQA +F+EM + D
Sbjct: 608 FLAKGKLNLACKLFEIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMGENVCPAD 667
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
I YN +I L + + A +++++ E+ D V Y+T+ L K+ ++ V KL+
Sbjct: 668 IATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMDDVNKLFG 727
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M P T L++ R+ ++D G C H D T L G
Sbjct: 728 QMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSG-CSPNHVTD---TTLDFLG 783
Query: 437 RWEEAFECSKQMLVRRRQVS 456
R E K ++R + S
Sbjct: 784 REMEKARYEKASIIRDKNSS 803
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 72/181 (39%), Gaps = 3/181 (1%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N L F + ++ A +F ++ S P T N +L F + G ++EM
Sbjct: 602 NTFLSIFLAKGKLNLACKLF-EIFSDMGVNPVKYTYNSMLSSFVKKGYFHQAWGIFNEMG 660
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ TYN+ I G K G A + E++ + TLI+ G +
Sbjct: 661 ENVCPADIATYNVIIQGLGKMGRADLASSVLEKLMEQGGYLDIVMYNTLINALGKAGRMD 720
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+LF +M + PD+ +N +I + L A + + M + ++VT T+
Sbjct: 721 DVNKLFGQMRNSGINPDVVTFNTLIEVHSKAGRLKDAYKFLKMMLDSGCSPNHVTDTTLD 780
Query: 360 F 360
F
Sbjct: 781 F 781
>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 115/485 (23%), Positives = 192/485 (39%), Gaps = 94/485 (19%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
KA E F + P + L + + +A E+ +++ P + +M
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF- 201
+ ++K +E L+ D M + V + +L+ + C ++ A +F
Sbjct: 267 ---IDGLAKAGHAQEALKVLDNMLAKACVPTEV----TYGILVNSLCKAGTLERAEELFR 319
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V S F PN+ L+ GF +SG + + EMV G+RP V+T+ + IDG CK G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVRN--------------------- 297
F A + FEEM R C P++ T TT+I G G V N
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 298 -----------IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+ +A QL DE+ K + P++ Y++++ L C + L D E+
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGL--CDGGSVENTLDDLFEQS 497
Query: 347 RIGHDNVT---YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN--- 400
+ +N+ ++ GL K+ L+ C+++ RM+ P T +L+ C +
Sbjct: 498 KAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSREN 557
Query: 401 -----FRVDLGLNLWGYLIDR--------GFCPHGH---------------------ALD 426
F + L + GYL D G C G A
Sbjct: 558 RVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYT 617
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED----LDRM 482
L TGLC +G+ + A ++M+ + A+Y + L++ +KLED D M
Sbjct: 618 ALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIK---GKKLEDACKFFDEM 674
Query: 483 IKNLQ 487
I Q
Sbjct: 675 IGKGQ 679
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 152/381 (39%), Gaps = 24/381 (6%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WE 124
+ E + +A H LKA P +F + AR R D A +E
Sbjct: 130 VAEKNYSQCYAIHEEMLKA-----------GIAPNTFSFNILIRSFARTRRADDAVTCFE 178
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNV 183
+M +R P L T I++ + K E+ E F M FV R +
Sbjct: 179 IMKR-KRCKPDLHTFL---ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL+A K +KEAR VF ++ F P+ N ++ G ++G M+ +
Sbjct: 235 LLKA----KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P+ VTY I ++ CK G A LF M P+ T+LIHG + +A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LFDEM + +PD+ + MI L + + A + +EM + VTY T+ GL
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K + ++ MI P + T + L+ FC R+D L L P+
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Query: 423 HALDLLVTGLCSRGRWEEAFE 443
LV GLC G E +
Sbjct: 471 QLYSSLVKGLCDGGSVENTLD 491
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 182/482 (37%), Gaps = 80/482 (16%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
+A E F+ + F P + +H A+ +A L + P ++T
Sbjct: 313 RAEELFR-VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT---H 368
Query: 143 SIMLSRISKFQSYEETLEAFDRMER-----------EIFVGIRKFG-------------- 177
++M+ + K ++E+ ++F+ M R I G+ K G
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 178 ------SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV-- 228
S + LL FC + EA + +L +PN + + L+ G + G V
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVEN 488
Query: 229 TAMEMF----------------------------------YHEMVLRGFRPSVVTYNIRI 254
T ++F + MV G +P TYNI I
Sbjct: 489 TLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548
Query: 255 DGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+G C+ + A L ++E V LP T T L G + + +A ++ +E R
Sbjct: 549 NGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
D+ AY A+ + L ++ A+ L EM + D Y + GL+K LE C
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDAC 668
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-FCPHGHALDLLVTG 431
K +D MI P T L++ C VD + + ++ RG D L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHG 728
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
C + + A + + M+ R + + L LV++ EK ++L ++ + A
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL---LQEMAAGGS 785
Query: 492 PP 493
PP
Sbjct: 786 PP 787
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 163/400 (40%), Gaps = 19/400 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A K + H F P + L ++ D+A +L+ + + S L+ S +
Sbjct: 419 AFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSL 476
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN-----VLLQAFCTQKEMKEARSV 200
+ + S E TL+ D E+ K +E + ++ C + EA +
Sbjct: 477 VKGLCDGGSVENTLD--DLFEQS------KAAAENLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMF--YHEMVLRGFRPSVVTYNIRIDGY 257
F +++S P+ T NIL+ G S + F H++ + G+ P VTY G
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGL 588
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G A+++ EE + T L G + +A LF EM ++ PD
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AY +I+ LI+ + L A + DEM K TY + L + ++ ++
Sbjct: 649 AAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEG 708
Query: 378 MIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M+ G+ V L+ FC +VD L L+ +I RG P L GL G
Sbjct: 709 MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSG 768
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
+ E+A E ++M A++ + L +++ + KL
Sbjct: 769 KTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +K + ++ ++L + APN + NIL+ F + + M
Sbjct: 122 YNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMK 181
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-TTLIHGAGLVRNI 298
+ +P + T+ I +D CK G A +F EM + +P + + T ++ + +
Sbjct: 182 RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRV 241
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK------------ 346
+AR++F +M K PD AYN MI L + A++++D M K
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 347 -----RIGH------------------DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ G ++V Y ++ G KS ++ C L+D M+E +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +++ C + + + ++ G P+ ++ GL GR AF
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 444 CSKQMLV 450
K M+
Sbjct: 422 IMKGMIA 428
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 43/269 (15%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTY-----------------------------------NIR 253
TA+ F GF+ V TY NI
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN- 312
I + + DA+ FE M+R C P L T L+ +A ++F EM
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGF 220
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ PD + AM+ +L++ + + A E+ +ME+ D + Y+TM GL K+ +
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
K+ D M+ VP T +L+ C ++ L+ + GF P+ L+ G
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYR 461
GR +EA +M+ EA YR
Sbjct: 341 AKSGRMKEACSLFDEMV-------EAGYR 362
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+N Q + +EM K + P+ ++N +I S R R + A+ + M+ KR D T+
Sbjct: 133 KNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTF 192
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV-VMLMKFFCVNFRVDLGLNLWGYLI 414
+ L K+ E +++ M+ FVP R + +++ RV ++G +
Sbjct: 193 LILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME 252
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P A + ++ GL G +EA + ML + +E +Y +L L +A E
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Query: 475 KLEDLDRMI 483
+ E+L R++
Sbjct: 313 RAEELFRVM 321
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 68/337 (20%), Positives = 137/337 (40%), Gaps = 36/337 (10%)
Query: 14 PGISDRLALLFSTTTQSSEIERI-TRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENV 72
PG+ + + T + E RI R++++ PD + L+ L ++ EN
Sbjct: 506 PGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR-------ENR 558
Query: 73 LGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT 132
+ R FA L LE + +TP L ++ D+A +++
Sbjct: 559 VERAFAL----LHDLEMVGYLPDAVTYTPLCIG-------LCKIGEVDRAVKMLEEASSR 607
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFC 189
+ + ++ + Q + + F M +R+ G+ + + ++
Sbjct: 608 GWNADVVAYTALCTGLCYQGQ-VDRAVSLFQEM-------VRQGGAPDAAAYCCIINGLI 659
Query: 190 TQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG-FRPSV 247
K++++A F +++ + P T L+ +G+V + M+ RG SV
Sbjct: 660 KGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSV 719
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLF 305
+ Y+ I G+CK A++LFE+M +P+ T +L GLVR+ +A++L
Sbjct: 720 MIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFD--GLVRSGKTEKAQELL 777
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
EM P + A++ L + + ++L+ E
Sbjct: 778 QEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
Length = 837
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 97/400 (24%), Positives = 171/400 (42%), Gaps = 43/400 (10%)
Query: 123 WELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
WE S + + + + + +IM+S + K +E D M + V
Sbjct: 411 WEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVP----NVVS 466
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N ++ C + M A SVF +L+R PN T +IL+ G FK+ A+++F +
Sbjct: 467 YNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQML 526
Query: 239 VLR----------------------------------GFRPSVVTYNIRIDGYCKKGCFG 264
L GF PS +TYN +DG+ K+G
Sbjct: 527 SLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNID 586
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+ ++ EM P++ T T+LI+G I A + DEM ++ L+ D+ AY+A+I
Sbjct: 587 SALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALI 646
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ RD+ +A +L E+ E + + + Y++M G + +E Y +MI +
Sbjct: 647 DGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIP 706
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
T L+ R+ +L+ ++ +G P +LV GLC++G+ E A +
Sbjct: 707 CDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKI 766
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMI 483
++M + S Y ++ Y + N E D M+
Sbjct: 767 LEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEML 806
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 8/331 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+++T SI++ K E+ L+ FD+M + + F FN ++ C +
Sbjct: 497 PNVVTY---SILIDGNFKKGDSEKALDLFDQM-LSLNIAPTDF---TFNTIINGLCKVGQ 549
Query: 194 MKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
M EAR L F P+ T N ++ GF + G++ + Y EM G P+VVTY
Sbjct: 550 MSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTS 609
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+G+CK A++ +EM + + LI G R++ A+ LF E+ +
Sbjct: 610 LINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVG 669
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
L P+ YN+MIS ++ AA+ +M RI D TY T+ GL+K L
Sbjct: 670 LSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFAS 729
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
LY M+ VP T +L+ C +++ + + + P + L+ G
Sbjct: 730 DLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGY 789
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G +EAF +ML R + +Y +L
Sbjct: 790 FREGNLKEAFTLHDEMLDRGLVPDDVTYDIL 820
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/331 (22%), Positives = 132/331 (39%), Gaps = 35/331 (10%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ +C Q + A ++F K+ PN T ++L+ G SG++ Y +M L G
Sbjct: 331 LMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNG 390
Query: 243 FRPSVV----------------------------------TYNIRIDGYCKKGCFGDAMR 268
PSV TYNI + CK G +A
Sbjct: 391 IPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACS 450
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L + M +P++ + +I G N+ A +F +M R+LKP++ Y+ +I
Sbjct: 451 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ D A++L D+M I + T++T+ GL K + +E F+P
Sbjct: 511 KKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCM 570
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T ++ F +D L ++ + + G P+ L+ G C R + A + +M
Sbjct: 571 TYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEM 630
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ +Y L + E +DL
Sbjct: 631 REKGLELDVTAYSALIDGFCKRRDMESAQDL 661
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 116/260 (44%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
N LL+ + +EA +F + + N T NI++ + G + MV +
Sbjct: 399 NSLLRGYLKAPLWEEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQ 458
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P+VV+YN I G+C+KG A +F +M P++ T + LI G + +A
Sbjct: 459 GMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKA 518
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
LFD+M N+ P +N +I+ L + ++ A + + E+ +TY+++ G
Sbjct: 519 LDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDG 578
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K ++ +Y M E P T L+ FC + R+DL L + ++G
Sbjct: 579 FIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELD 638
Query: 422 GHALDLLVTGLCSRGRWEEA 441
A L+ G C R E A
Sbjct: 639 VTAYSALIDGFCKRRDMESA 658
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 97/186 (52%), Gaps = 1/186 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ FC +++M+ A+ +F +LL +PN N ++ GF++ ++ A ++Y +M+
Sbjct: 642 YSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMI 701
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ TY IDG K+G A L+ EM +P + T L++G +
Sbjct: 702 NDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLE 761
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR++ +EM ++N+ P + YN +I+ R +L A L DEM ++ + D+VTY +
Sbjct: 762 NARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI 821
Query: 360 FGLMKS 365
G K
Sbjct: 822 NGKFKG 827
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 111/496 (22%), Positives = 200/496 (40%), Gaps = 62/496 (12%)
Query: 44 PFP--DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTP 101
P+P Q PT H +TTPLS +V+ L ++ AL +FK F
Sbjct: 37 PYPRYSQDTVPTSQIH-QETTPLSQN---HVIDALLCHVNDPQSALRYFKRAETQRGFIR 92
Query: 102 TPDAFEKTLHILARM-RYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQ----S 154
DA+ LHIL R A +L++ + PS + I ++ F+
Sbjct: 93 GVDAYCVLLHILMRSPETHGHARKLLNRYVSGDSDPSPVVFVDHLINCAKRFDFELDHRV 152
Query: 155 YEETLEAFDRMEREIFVGIRKFGS----------EEFNVLLQAFCTQKEMKEARSVFVKL 204
+ L A+ R R I I F + N+LL A + + E R ++ K+
Sbjct: 153 FNYLLNAYIRANR-IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKM 211
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFY---------------------------- 235
+ R ++ T+++++ + G V E ++
Sbjct: 212 VLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNS 271
Query: 236 -------HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM RG+ PS T+ I +G +A+RL EEM +L T+L
Sbjct: 272 NLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSL 331
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G N+ A LF+++ + L P+ Y+ +I ++ A EL +M+ I
Sbjct: 332 MKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGI 391
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+++ G +K+ E KL+D ++ V T ++M + C ++D +
Sbjct: 392 PPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACS 450
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
L ++++G P+ + + ++ G C +G + A ML R + + +Y +L
Sbjct: 451 LLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNF 510
Query: 469 QANANEKLEDL-DRMI 483
+ +EK DL D+M+
Sbjct: 511 KKGDSEKALDLFDQML 526
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 34/189 (17%), Positives = 82/189 (43%), Gaps = 1/189 (0%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I A F+ M +++ P + N ++++L+R + +L ++M + I D+ T H
Sbjct: 166 IENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRGIYGDHFTVHV 225
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M +K +E + + E ++++ C +LGL L + +RG
Sbjct: 226 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 285
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS-EASYRMLQRYLVQANANEKL 476
+ P ++ ++G EA ++M+ + ++ + +++ Y Q N + L
Sbjct: 286 WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSAL 345
Query: 477 EDLDRMIKN 485
+++ ++
Sbjct: 346 NLFNKITED 354
>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 874
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 147/344 (42%), Gaps = 27/344 (7%)
Query: 147 SRISKFQSYEETLEA---FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
SRIS + L+A F ME + ++G+ + S +N++L+ FC +++A+++F
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 204 LLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + ++ NI L G G E +M +G PS+ +YNI +DG CK G
Sbjct: 317 IRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGM 376
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA + M+R P T L+HG V + A+ L EM + N P+ N
Sbjct: 377 LSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY------- 375
++ SL + ++ A EL+ +M EK G D VT + + GL S L+ ++
Sbjct: 437 LLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 376 ----------------DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
D +IE +P T L+ C R NL+ ++
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQ 556
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P A ++ + C +G+ AF K M + S +Y L
Sbjct: 557 PDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 91/407 (22%), Positives = 160/407 (39%), Gaps = 65/407 (15%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PDA + LH + D A L+ + R + L + +I+L + K E E
Sbjct: 394 PDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWKMGRISEAEE 452
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV------------------FV 202
+M + + + N+++ C E+ +A + ++
Sbjct: 453 LLRKMNEKGY----GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYI 508
Query: 203 KLL------SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
L+ + P+ T + LL G ++G + + EM+ +P V YNI I
Sbjct: 509 GLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHH 568
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+CK+G A R+ ++ME+ C SL+T +LI G G+ I + L DEM ++ + P+
Sbjct: 569 FCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPN 628
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRI---------------------------- 348
I YN I L + A L+DEM +K I
Sbjct: 629 ICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688
Query: 349 ------GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
G Y MF L+ + L +L + +++ F T L++ C
Sbjct: 689 TAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDE 748
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+++ + +IDRG+ AL ++ GL G +EA + +M+
Sbjct: 749 LEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMM 795
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 154/354 (43%), Gaps = 29/354 (8%)
Query: 104 DAFEKTLHILARMRYFDQAWEL-----MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
DA IL R + ++ EL S +Q+T +S +LS +S F
Sbjct: 40 DATPTIARILVRAKMHEEIQELHNLILSSSIQKTK--------LSSLLSVVSIFAKSNHI 91
Query: 159 LEAFDRMEREIFVGIR-KFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR------FAPN 211
+AF + F +R +F + +V L + +KE R FV L + AP
Sbjct: 92 DKAFPQ-----FQLVRSRFPENKPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQ 146
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N+L+ +S V A + EM +G +P+ T+ I + GYCK G + L
Sbjct: 147 TYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLN 206
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
ME LP+ T++ + ++ ++M + L PDI +N+ IS+L +
Sbjct: 207 AMESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEG 266
Query: 332 DLNAAMELMDEME-EKRIG---HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ A + +ME ++ +G +++TY+ M G K LE L++ + E +
Sbjct: 267 KVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASL 326
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ + ++ + + + + D+G P ++ ++L+ GLC G +A
Sbjct: 327 QSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/282 (20%), Positives = 104/282 (36%), Gaps = 42/282 (14%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P L+T S +L+ + K + E F M E + S +N+ + FC Q +
Sbjct: 522 PDLITY---STLLNGLCKAGRFAEAKNLFAEMMGEKL----QPDSVAYNIFIHHFCKQGK 574
Query: 194 MKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ A V + + + +T N L+LG + + EM +G P++ TYN
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD------ 306
I C+ DA L +EM + P++ + LI V + A+++F+
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 307 ----------------------------EMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+ R + Y ++ SL + +L A
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASG 754
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ +M ++ G D + GL K + D+M+E
Sbjct: 755 ILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 64/141 (45%), Gaps = 4/141 (2%)
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
KP + YN ++ S I+ R + L +M I T++ + L SS ++ +
Sbjct: 109 KPSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARE 168
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L+D M E P T +L++ +C D GL L + G P+ + +V+ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKVIYNTIVSSFC 228
Query: 434 SRGRWEEAFECSKQMLVRRRQ 454
GR ++ S++M+ + R+
Sbjct: 229 REGRNDD----SEKMVEKMRE 245
>gi|255660818|gb|ACU25578.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
Length = 418
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 152/353 (43%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +FC + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFCKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKL 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ + TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L++EM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + L+ A EL DEM + + ++V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKLDDANELFDEMLDNGLVPNSV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
++ T+ G K ++ ++Y +M+ P T L+ C N + +L +
Sbjct: 243 SFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKNGDLKQAQDLINEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/255 (20%), Positives = 104/255 (40%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ ++ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKLDDA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E FD M V S F L+ C + A ++ ++LS+ +P+ T N
Sbjct: 226 NELFDEMLDNGLVP----NSVSFTTLIDGHCKDGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G ++GD+ + +EM ++G +P +TY N
Sbjct: 282 LIYGLCKNGDLKQAQDLINEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKEN 341
Query: 252 IR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLMKEMQRDGYVPSV 416
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
Length = 800
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + E + + + F P T N ++ GF ++G + + Y +M
Sbjct: 494 YNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMC 553
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P++VTY IDGYCK C A+++ ++ P + +LI+G N+
Sbjct: 554 AKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMS 613
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A Q+ M K L P+I YN+ I+ + + A+ ++M ++ I D TY T+
Sbjct: 614 HALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLI 673
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K + KLY M+ +P T L C N +D L +
Sbjct: 674 DGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIR 733
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ ++L+ G G+ +EAF +ML R+ + +Y +L
Sbjct: 734 PNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDIL 777
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 85/380 (22%), Positives = 165/380 (43%), Gaps = 8/380 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KAL+ F+ TL+ PT + + ++A+EL + R H L + ++
Sbjct: 300 KALDIFEETLRD-GLVPTDVTYTVLIRGCTEEGMPEKAYELCRQM-RDHGLLPSTNEFNM 357
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + + +++ + F M GI + +N+L+ C +++++EA +++ K+
Sbjct: 358 VIKGLLNDKLWKDAVSLFKEMADS---GIPD--AFTYNILIHWLCQRRKIREALNLWEKM 412
Query: 205 -LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ P T + LLL + +G + Y EM +GF P+VVTY + G+ K F
Sbjct: 413 NETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAF 472
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A L EM++ + T TLI+G +V + + ++ P YN++
Sbjct: 473 DKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSI 532
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I+ I+ + +A + +M K I + VTY + G K+S + K+ + +
Sbjct: 533 INGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGL 592
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P L+ FC + L + ++ G P+ + +TG + EEA
Sbjct: 593 RPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALR 652
Query: 444 CSKQMLVRRRQVSEASYRML 463
++M+ + A+Y L
Sbjct: 653 FYEKMIKEGIDLDTATYTTL 672
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/340 (22%), Positives = 151/340 (44%), Gaps = 9/340 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTP + + FD+A+ L++ +++ S + + +++ + E
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC-NDYTYNTLINGLCVVGRVCEV 510
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E R E E FV + +N ++ F M A +V+ ++ ++ PN T
Sbjct: 511 GEMLKRFETEGFVPT----AMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTS 566
Query: 218 LLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+ G+ K S A++M +++ +G RP + YN I G+C++G A+++ M +
Sbjct: 567 FIDGYCKTSCCDLALKML-NDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKD 625
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
LP++ + I G ++ + +A + +++M K + D Y +I + ++ A
Sbjct: 626 GLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFA 685
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++L EM K D++T+ + GL ++ ++ KL D M P ML+
Sbjct: 686 LKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLING 745
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+ N ++ L +++R P D+LV G+ S G
Sbjct: 746 YLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV-GMKSLG 784
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 131/310 (42%), Gaps = 6/310 (1%)
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
Y++ + FD M ++ S V + + C ++ A V K+ + F P +
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCS----VAIASLCKLRDANRALLVLRKMQDAGFVPWDF 248
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N ++ + G + E++ G + SVV + GYC + A+ +FEE
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
R +P+ T T LI G +A +L +M L P +N +I L+ +
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A+ L EM + I D TY+ + L + + L+++M E P T L
Sbjct: 369 KDAVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ +CVN +D + L+ + +GF P+ L+ G ++ +++A+ +M
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGV 487
Query: 454 QVSEASYRML 463
++ +Y L
Sbjct: 488 SCNDYTYNTL 497
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/296 (20%), Positives = 123/296 (41%), Gaps = 2/296 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+V+++A + +A +F ++ S P+ + ++ + + D + +M
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P T+N +D K G +A+ + +E+ S+ TTL+HG L R +
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVR 299
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +F+E + L P Y +I A EL +M + + ++ +
Sbjct: 300 KALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVI 359
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+ + L+ M + +P T +L+ + C ++ LNLW + + G
Sbjct: 360 KGLLNDKLWKDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVK 418
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
P+ L+ C G +EA + +M + + +Y L + + A +K
Sbjct: 419 PYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474
>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
Length = 670
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 150/322 (46%), Gaps = 18/322 (5%)
Query: 147 SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ + F+S E+ L DRM+ E V K F V+ +A+ ++A +F ++
Sbjct: 101 ANLGDFKSLEKVL---DRMKCEKRVIFEKC----FIVIFKAYGKAHLPEKAVDLFDRMAC 153
Query: 207 RFAPN------NKTMNILLLGFKESGDVTAMEMFYHEMVLRG--FRPSVVTYNIRIDGYC 258
F N +N+++ +E A+E + H + +G P+V+T+N+ I C
Sbjct: 154 EFECKRTGKSFNSVLNVII---QEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMC 210
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G DA+++F +M C P + T TL+ G I +A L DEM P
Sbjct: 211 KVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPV 270
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+N +I+ L + DL+ A +L+D M K + VTY+T+ GL LE L DRM
Sbjct: 271 TFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRM 330
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ K VP T ++ R G + + +RG+C + + L++GL G+
Sbjct: 331 VSSKCVPNVVTYGTIINGLVKQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKS 390
Query: 439 EEAFECSKQMLVRRRQVSEASY 460
+EA K+M V+ +++ Y
Sbjct: 391 QEAMHLFKEMTVKGYELNTIVY 412
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 145/327 (44%), Gaps = 16/327 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+P F ++ L + +A +L+ + ++ P+ +T ++ L K E+
Sbjct: 267 PSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL---EKA 323
Query: 159 LEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ DRM V + +G+ ++ Q + V + R + N +
Sbjct: 324 ISLLDRMVSSKCVPNVVTYGT-----IINGLVKQGRALDGACVLALMEERGYCVNEYVYS 378
Query: 217 ILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G FKE AM +F EM ++G+ + + Y+ IDG C+ G DA+ + EM
Sbjct: 379 TLISGLFKEGKSQEAMHLF-KEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTN 437
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C P+ T ++L+ G N H+A +++ +M K N + Y+ +I L + +
Sbjct: 438 KGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 497
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EG-KFVPKTRTVVML 393
AM + +M K D V Y +M GL + +E +LY+ M+ +G P T +L
Sbjct: 498 AMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNIL 557
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ C + ++L ++DRG P
Sbjct: 558 LNTLCKQSSISRAIDLLNSMLDRGCDP 584
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 165/403 (40%), Gaps = 16/403 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDA--FEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLK 140
+ALEF+ + + +P+ F + + ++ D A ++ +++ P + T
Sbjct: 179 RALEFYNHVIGAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTY- 237
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE-EFNVLLQAFCTQKEM-KEAR 198
++ + K +E + D M+ + F S FNVL+ C + ++ + A+
Sbjct: 238 --CTLMDGLCKADRIDEAVSLLDEMQID-----GCFPSPVTFNVLINGLCKKGDLSRAAK 290
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
V L PN T N L+ G G + MV P+VVTY I+G
Sbjct: 291 LVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLV 350
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K+G D + ME + +TLI G +A LF EM + + +
Sbjct: 351 KQGRALDGACVLALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTI 410
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y+A+I L R + A+E++ EM K + T ++ G ++ +++ M
Sbjct: 411 VYSAVIDGLCRDGKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDM 470
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ F +L+ C + +V + +W ++ +G P A ++ GL G
Sbjct: 471 AKHNFTQNEVCYSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLV 530
Query: 439 EEAFECSKQMLVR--RRQVSEASYRMLQRYLVQANANEKLEDL 479
E+A + +ML + Q +Y +L L + ++ + DL
Sbjct: 531 EDAMQLYNEMLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDL 573
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 114/225 (50%), Gaps = 8/225 (3%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
S ++S + K +E + F +E+ V + + ++ ++ C + +A V
Sbjct: 378 STLISGLFKEGKSQEAMHLF----KEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLS 433
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ ++ PN T + L+ GF E+G+ + +M F + V Y++ I G CK G
Sbjct: 434 EMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDG 493
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGA 319
+AM ++ +M C P + +++I+G + + A QL++EM + + +PD+
Sbjct: 494 KVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVT 553
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
YN ++++L + ++ A++L++ M ++ D VT T+F +++
Sbjct: 554 YNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTC-TIFLRMLR 597
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VL+ C ++KEA V+ ++L + P+ + ++ G +G V Y+EM+
Sbjct: 482 YSVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEML 541
Query: 240 LRG--FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+G +P VVTYNI ++ CK+ A+ L M C P L T T + ++R
Sbjct: 542 CQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLR---MLRE 598
Query: 298 I----HQARQLFDEMPKRNLK 314
R+ DE+ R LK
Sbjct: 599 KLDPPQDGREFLDELVVRLLK 619
>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
Length = 796
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 138/308 (44%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ AF +K+A V + + F P+ +T N+L +G ++G V EM
Sbjct: 281 YNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEME 340
Query: 240 LRGFR-PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P VVTYN +D K C DA+RL EEM P+L T ++ +
Sbjct: 341 RLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKL 400
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +++ + L PD+ YN +I + + ++ A LMDEM K + D T +T+
Sbjct: 401 EEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTV 460
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ L K E +L + FVP + +M + + + L LW +I+R
Sbjct: 461 LYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKL 520
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
P + L+ GLC R +EA + + + + E +Y ++ Y + +
Sbjct: 521 IPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFR 580
Query: 478 DLDRMIKN 485
++M++N
Sbjct: 581 FHNKMVEN 588
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 164/368 (44%), Gaps = 5/368 (1%)
Query: 113 LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG 172
L + D+A+ L ++R +L + + + ++ K++ + L + M + G
Sbjct: 323 LCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK---G 379
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
+ K N+++++ C + +++EA K+ AP+ T N L+ + ++G+V
Sbjct: 380 V-KPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
EMV +G + T N + CK + DA L + +P + T++
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
N A +L+D+M +R L P I YN +I L R L A++ ++E EK + D
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPD 558
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY+ + K LE + +++M+E F P T LM C++ ++D L L+
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFE 618
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+++G + L+ +C G + A M V+ Q +Y ++ L +A
Sbjct: 619 SWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAG 678
Query: 472 ANEKLEDL 479
+E+ ++
Sbjct: 679 RSEEAHNM 686
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 91/361 (25%), Positives = 158/361 (43%), Gaps = 21/361 (5%)
Query: 99 FTPTPDA--FEKTLHILARMRYFDQAWELMSHVQR-----THPSLLTLKSMSIMLSRISK 151
F +PDA + L+ R +A L++ ++R T P+ TL S L I +
Sbjct: 237 FGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQ 296
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFA 209
E++ A+ E ++ +NVL C ++ EA + ++ L
Sbjct: 297 ATKVVESMTAYG-FEPDL---------RTYNVLAMGLCQAGKVDEAFRLKDEMERLGTAL 346
Query: 210 PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T N L+ FK A+ + EM +G +P++VT+NI + CK+G +A+
Sbjct: 347 PDVVTYNTLVDACFKWRCSSDALRLL-EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
E++ P + T TLI N+ +A L DEM + LK D N ++ +L
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ + A EL+ ++ D V+Y T+ K E +L+D+MIE K +P
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+K C R+ ++ +++G P ++++ C G E AF +M
Sbjct: 526 TYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKM 585
Query: 449 L 449
+
Sbjct: 586 V 586
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/348 (20%), Positives = 135/348 (38%), Gaps = 40/348 (11%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
+AF M+ + G+ K + N +L C K ++A + R F P+ + +
Sbjct: 437 KAFTLMDEMVGKGL-KMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495
Query: 219 LLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+ FKE A+ + + +M+ R PS+ TYN I G C+ +A+ E
Sbjct: 496 MAAYFKEYNPEPALRL-WDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P T +IH ++ A + ++M + + KPD+ N +++ L L+ A+
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L + EK D +TY+T+ + K ++ +D M P T +++
Sbjct: 615 KLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSAL 674
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLL----------------------------- 428
R + N+ L D G A LL
Sbjct: 675 SEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNA 734
Query: 429 -------VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ GLC+ G+ +EA +M+ + V ++Y L L++
Sbjct: 735 LETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782
>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
Length = 740
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 177/405 (43%), Gaps = 19/405 (4%)
Query: 50 LHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
L+ +L Q + L+ + N+L + L + F++ L +PD F T
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-------SPDVFTYT 237
Query: 110 LHILA--RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
IL R R D A+ + + + P+ +T ++ I+ + EA D +
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL------INGLCNEGRVDEALDML 291
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKE 224
E I GI + + + A C + +EA + ++ R PN +T L+ G
Sbjct: 292 EEMIEKGIEP-TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G + YH+M+ G P+ VTYN I+ C G F A+++F ME L + QT
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 410
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+I G L +I +A LF++M K P + YN +I+ + ++N A L+D M+
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
E D TY+ + G K LE + M+E P + L+ + +VD
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L+L + + G P+ + + ++ GL R+ EA + +M+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/348 (23%), Positives = 153/348 (43%), Gaps = 6/348 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+++ + ++S +S+ E + + +M +E V + +N L+ C A
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP----NTVTYNALINELCVGGRFSTA 392
Query: 198 RSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+F + + N +T N ++ G GD+ + + +M+ G P+VVTYN I+G
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y KG +A RL + M+ C P T L+ G + A F EM + L P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+Y A+I + ++ A+ L+ MEE + +Y+ + GL K + K+ D
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M+E +P T L+ C N R ++ + R P+ + L+ GLC G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632
Query: 437 RWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMI 483
+ +EA K+M + E ++ ++ ++V + L RM+
Sbjct: 633 KADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMV 680
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 22/424 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L + + + A H + ++FF + + P + + F L+ L R R F A
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA- 127
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
H +L +K+ ++ EE D + +G F N
Sbjct: 128 --------DHIRILMIKAC----------RNEEEIRRVADFLNEISGMGF-GFSLYSCNT 168
Query: 184 LLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL + ++ AR+++ ++L S P+ T N L+ + G V E+ ++
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P V TY I G+C+ A +F+ M + C P+ T +TLI+G + +A
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +EM ++ ++P + Y I++L A+EL+ M+++ + TY + GL
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ LE LY +M++ VP T T L+ CV R L ++ ++ G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDR 481
+ ++ GLC G E+A ++ML + +Y ++ YL + N N LD
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 482 MIKN 485
M +N
Sbjct: 469 MKEN 472
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + T+ + A R + + + P+ T N L+ GF + G + + ++ EMV
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V+Y IDG+ K G A+ L + ME + C P++++ +I+G
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ D+M ++ L P++ Y +I L R A ++ +ME+++ + TY ++
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+GL + + L M P T L+ F V R+D L ++D G
Sbjct: 626 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCK 685
Query: 420 PHGHALDLLVTGL 432
P+ +L+ GL
Sbjct: 686 PNYRTYSVLLKGL 698
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 77/155 (49%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN ++ N ++ G + + E +MV +G P+V+TY IDG C+ G A ++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +ME+ CLP+L T ++LI+G +A L EM ++ L PD + ++I +
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 665
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
++ A L+ M + + TY + GL K
Sbjct: 666 LGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQK 700
>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
sativus]
Length = 686
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 155/352 (44%), Gaps = 11/352 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F PT F LH L +A +L Q P+++T ++ L R +
Sbjct: 147 FHPTVVTFNTLLHGLCVEDRISEALDLFH--QMCKPNVVTFTTLMNGLCREGR------V 198
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMN 216
+EA ++R + G++ + ++ C + A ++ K+ +S PN N
Sbjct: 199 VEAVALLDRMLEDGLQP-NQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYN 257
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G + G + + EM + P +VTYN I+G+C G + DA +L +EM
Sbjct: 258 TIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLER 317
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T + LI+ +A +L+DEM R++ P Y++MI + L+AA
Sbjct: 318 KINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAA 377
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ K D +T++T+ G ++ ++ KL M E V T T L+
Sbjct: 378 EHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
FC ++ +L +I G CP+ + L+ GLC G+ ++A E K M
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 128/277 (46%), Gaps = 20/277 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-----SRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
FN L+ +C K + + +KLL + N T L+ GF + GD+ A +
Sbjct: 396 FNTLIAGYCRAKRVDDG----IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLL 451
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQT 284
EM+ G P+VVT N +DG C G DA+ +F+ M++ P +QT
Sbjct: 452 QEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQT 511
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI G +A +L++EMP R + PD Y++MI L + L+ A ++ D M
Sbjct: 512 YNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMG 571
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
K D VT++T+ G K+ ++ +L+ M + V T + L+ F +D
Sbjct: 572 SKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNID 631
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+++ +I G P + ++TGL S+ E A
Sbjct: 632 GALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERA 668
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 128/300 (42%), Gaps = 4/300 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL C + + EA +F ++ PN T L+ G G V M+
Sbjct: 154 FNTLLHGLCVEDRISEALDLFHQMCK---PNVVTFTTLMNGLCREGRVVEAVALLDRMLE 210
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-CLPSLQTITTLIHGAGLVRNIH 299
G +P+ +TY +DG CK G A+ L +ME V+ +P++ T+I G
Sbjct: 211 DGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHS 270
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF EM ++ + PDI YN MI+ + A +L+ EM E++I D VT+ +
Sbjct: 271 DAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALI 330
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+K +LYD M+ +P T T ++ FC R+D +++ +G
Sbjct: 331 NAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCS 390
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ G C R ++ + +M + +Y L Q +DL
Sbjct: 391 PDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDL 450
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 103/456 (22%), Positives = 179/456 (39%), Gaps = 59/456 (12%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLT 138
+ + AL + + H P + + L + A L +Q P ++T
Sbjct: 231 GDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVT 290
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
M ++ E+ L+ + +ER+I + F + L+ AF + + EA
Sbjct: 291 YNCMINGFCISGRWSDAEQLLQ--EMLERKINPDVVTFSA-----LINAFVKEGKFFEAE 343
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
++ ++L R P+ T + ++ GF + + A E ++ +G P ++T+N I GY
Sbjct: 344 ELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGY 403
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM--------- 308
C+ D ++L EM + + T TTLIHG V +++ A+ L EM
Sbjct: 404 CRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNV 463
Query: 309 -------------------------------------PKRNLKPDIGAYNAMISSLIRCR 331
P ++PD+ YN +I LI
Sbjct: 464 VTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEG 523
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A EL +EM + I D +TY +M GL K S L+ +++D M F P T
Sbjct: 524 KFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFN 583
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +C VD GL L+ + RG L+ G + A + ++M+
Sbjct: 584 TLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISS 643
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ 487
+ R + L + E+LE M+++LQ
Sbjct: 644 GVYPDTITIRNM---LTGLWSKEELERAVAMLEDLQ 676
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 102/220 (46%), Gaps = 5/220 (2%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF P+VVT+N + G C + +A+ LF +M C P++ T TTL++G + +A
Sbjct: 146 GFHPTVVTFNTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEA 201
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE-KRIGHDNVTYHTMFF 360
L D M + L+P+ Y ++ + + D +A+ L+ +MEE I + V Y+T+
Sbjct: 202 VALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIID 261
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K L+ M E + P T ++ FC++ R L +++R P
Sbjct: 262 GLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINP 321
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
L+ G++ EA E +ML R S +Y
Sbjct: 322 DVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTY 361
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/245 (21%), Positives = 109/245 (44%), Gaps = 8/245 (3%)
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
++ I + +C A+ F ++ ++ P++ T TL+HG + I +A LF +M
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
KP++ + +++ L R + A+ L+D M E + + +TY T+ G+ K
Sbjct: 178 ----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233
Query: 369 EGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L +M E +P ++ + R NL+ + ++ P +
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKNL 486
++ G C GRW +A + ++ML R+ ++ L V+ + E+L D M+
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLP-- 351
Query: 487 QAVLP 491
++++P
Sbjct: 352 RSIIP 356
>gi|147865347|emb|CAN84084.1| hypothetical protein VITISV_018999 [Vitis vinifera]
Length = 561
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 101/443 (22%), Positives = 187/443 (42%), Gaps = 54/443 (12%)
Query: 28 TQSSEIERI-TRIINDHPFPDQPLHPTLLQHLPQTTP-----------LSSTLVENVLGR 75
T++S E++ TR ++ P + L +Q L L+ +V V R
Sbjct: 82 TENSPKEQLKTRAVDGFLSPGEKLRGVFIQRLRGKAAIELALTNVGIDLTIDIVSEVXNR 141
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTH 133
+ G + FF + ++ P D + + L R ++ + ++ H+Q
Sbjct: 142 ---GNLGGEAMVXFFNWAVKQPTIPKDVDTYNVIIKALGRRKFIEFXVXVLKDMHIQGIS 198
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+ TL SI++ K + + +E F +E F G K +E NVLLQ C +
Sbjct: 199 PNYETL---SIVMDSFIKARQVSKAIEMFRNLEE--FGG--KCDTESLNVLLQCLCQRSH 251
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ A F + N T NI++ G+ + G + ME MV GF P+ +T++
Sbjct: 252 VGAANLFFNAMKGGIPFNCMTYNIIIGGWSKYGKIGEMERCLKAMVADGFSPNCLTFSHL 311
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+G + G DA+ +F ME C+P+ LI R+ + + ++ M N
Sbjct: 312 IEGLGRAGRIDDAVEVFHHMEETGCVPNACVYNALISNFISTRDFDECLKYYNFMVSSNC 371
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-----L 368
P++ Y +I + ++ R + A+E++DEM +G G++ ++G +
Sbjct: 372 DPNMDTYTKLIVAFLKARKVADALEMLDEM----VGR----------GMIPTTGAITSFI 417
Query: 369 EGVCKLYDRMIEGKFVPKTRTV----------VMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
E +C+ K R V ++LM+ + + LNLW + + G+
Sbjct: 418 EPLCQYGPPHAAMMIYKKARKVGCRISLSAYKLLLMRLSRFG-KCGMLLNLWDEMQESGY 476
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
+ ++ GLC+ G+ + A
Sbjct: 477 SSDTEVYEYVINGLCNIGQLDTA 499
>gi|410109885|gb|AFV61022.1| pentatricopeptide repeat-containing protein 11, partial
[Coelocarpum swinglei]
Length = 429
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/349 (28%), Positives = 157/349 (44%), Gaps = 11/349 (3%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 89 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWXFYKEILECGYPA--SLYFFNI 145
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA-RSVFVK 203
++ R K L FD + + G+R FN L+ + ++ E R
Sbjct: 146 LMHRFCKEGDIRVALSVFDAITK---WGLRP-SVVSFNTLMNGYIRLGDLDEGFRLKSAM 201
Query: 204 LLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
S P+ T ++L+ G KES A E+F EM+ +G P+ VT+ IDG+CK G
Sbjct: 202 HASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLDKGLVPNGVTFTTLIDGHCKNGR 260
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
AM ++++M + P L T TLI+G ++ QA+ L DEM + LKPD +Y
Sbjct: 261 VDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMRMKGLKPDKISYTT 320
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I + DL A E M ++ I D+V Y + GL + K+ M+
Sbjct: 321 LIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSIDAEKMLREMLSVG 380
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 381 LRPDTGTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 429
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 128/262 (48%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A+ +F+ + + PS+ + TL++G
Sbjct: 127 FYKEILECGYPASLYFFNILMHRFCKEGDIRVALSVFDAITKWGLRPSVVSFNTLMNGYI 186
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM +K + + V
Sbjct: 187 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 246
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 247 TFTTLIDGHCKNGRVDLAMEVYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 306
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P + L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 307 RMKGLKPDKISYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 364
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D ++M++ + +V L P T
Sbjct: 365 -RSIDAEKMLREMLSVGLRPDT 385
>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 1280
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C K + +A ++ +++ R P T + L+ GF G ++EMV
Sbjct: 196 YSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMV 255
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++ P T+NI +D CK+G +A + M + P++ T TL+ G LV +
Sbjct: 256 MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ + + + + P+ +YN MI+ + + ++ A+ L EM + I VTY+++
Sbjct: 316 KAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ + +L D M T L+ FC N VD + L + + G
Sbjct: 376 DGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQ 435
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ ++L+ GLC G+ + A + + +L++ V+ +Y ++
Sbjct: 436 PNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIM 479
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 80/342 (23%), Positives = 153/342 (44%), Gaps = 10/342 (2%)
Query: 113 LARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L + + A+ L S V+R P+++T S+ + KF+ +AF R+ E+
Sbjct: 203 LCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFK------DAF-RLFNEMV 255
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
+ + FN+L+ A C + ++KEA++V ++ P T N L+ G+ +V
Sbjct: 256 MKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ + P+ +YNI I+G+CK +A+ LF EM P T +LI
Sbjct: 316 KAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G I A +L DEM + DI YN++I + + ++ A+ L+ +++E I
Sbjct: 376 DGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQ 435
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ TY+ + GL K L+ ++ ++ + T +++ C D L
Sbjct: 436 PNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVL 495
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ D G P + ++ L + E+A + ++M+++
Sbjct: 496 LSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIK 537
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 132/306 (43%), Gaps = 54/306 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
++L+ +C +M A SVF K IL +G +G V +F+ ++
Sbjct: 105 LSILINCYCHLGQMTFAFSVFAK-------------ILKMGLCLNGKVNEALLFHDHVLA 151
Query: 241 RGFRPSVVTYNIRIDGYCKKG-------------------------------C----FGD 265
GF + VTY I I+G CK G C D
Sbjct: 152 LGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTD 211
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L+ EM P++ T ++LI+G +V A +LF+EM +N+ PD +N ++
Sbjct: 212 AYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVD 271
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG--LMKSSG-LEGVCKLYDRMIEGK 382
+L + + A ++ M ++ + VTY+T+ G L+ G + V + RM +
Sbjct: 272 ALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRM---R 328
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P +R+ +++ FC VD L L+ + RG PH + L+ GLC GR A+
Sbjct: 329 VAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAW 388
Query: 443 ECSKQM 448
E +M
Sbjct: 389 ELVDEM 394
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 16/228 (7%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-CLPSLQTITTLIHGAGLV 295
+M +G +P + T +I I+ YC G A +F ++ ++ CL L H L
Sbjct: 92 QMESKGVKPDLFTLSILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLA 151
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
H Y +I+ L + AA++++ ++E K + + V Y
Sbjct: 152 LGFHLNHV---------------TYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMY 196
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ GL K + LY MI + P T L+ FC+ + L+ ++
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM 256
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ P + ++LV LC G+ +EA M+ + + +Y L
Sbjct: 257 KNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTL 304
>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
Length = 883
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ A C + ++ EA VF K+ PN+ T +IL+ G E+G + EMV +
Sbjct: 235 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 294
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +PS TY + I C G AM++ +EM AC+P++ T T LI I +A
Sbjct: 295 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 354
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F +M K L P I +NA+I+ + + +A +L+ ME+ + TY+ + G
Sbjct: 355 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 414
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + S L R+++ +P T +L+ FC ++++ N++ + G P
Sbjct: 415 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 474
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G L+ GLC GR E+A M+ + + E ++ L
Sbjct: 475 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 516
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 6/323 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D+A +++ + T + + + +I++ R+ + EE F +M + G
Sbjct: 317 DKAMKMLDEMA-TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP----GII 371
Query: 180 EFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN L+ +C + + A + V PN +T N L+ G + +
Sbjct: 372 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 431
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P VTYNI +DG+CK+G A +F M P T T LI G + +
Sbjct: 432 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 491
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA + M K+ + D + A+I + L + M E R T++
Sbjct: 492 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 551
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L + +M++ VP T +L++ C L L + + G
Sbjct: 552 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 611
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P+ + +++ GLC+ GR EEA
Sbjct: 612 SPNVYTYTIIINGLCNNGRVEEA 634
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 1/292 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C + +A + +++ P+ T NIL+ GF + G + ++ M
Sbjct: 408 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 467
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P T+ IDG CK G A + M + T T LI G +
Sbjct: 468 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 527
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF+ M + +N + +L + LN A ++ +M + + VT+ +
Sbjct: 528 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 587
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ K+ +RM + P T +++ C N RV+ + + G
Sbjct: 588 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 647
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
P+ +LV GR + AF+ M+ Q + Y L V +N
Sbjct: 648 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 699
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 1/212 (0%)
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ Y MV GF + Y ++ CK G A ++ R+ T+L+
Sbjct: 180 LVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN 239
Query: 293 GLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ +A ++F++M K N +P+ Y+ +I L L A +L EM EK
Sbjct: 240 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 299
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY + + K+ D M VP T +L+ C +++ ++
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 359
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
++ G CP + L+ G C G AF+
Sbjct: 360 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 391
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/270 (20%), Positives = 105/270 (38%), Gaps = 37/270 (13%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRF-----APNNKTMNILLLGFKESGDVTAMEMFYHE 237
+L++ C E ++ +K+L R +PN T I++ G +G V E
Sbjct: 585 ILIEGHCRAGET----ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 640
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ TY + + + K G A ++ M + C P+ + L+ G L
Sbjct: 641 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 700
Query: 298 IHQARQLFD--EMPKRNLKPDIGAYNAMISSLIRC----RDLNAAMELMDEMEEKRIGHD 351
AR L ++ R+L + N + + + +C DL
Sbjct: 701 AIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVPTEDL------------------ 742
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
Y+ + GL K + +L M++ P + + +++ +C + D L
Sbjct: 743 ---YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMK 798
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++D F P + ++ GL + GR +EA
Sbjct: 799 LVLDNKFVPSFASYCWVIHGLRNEGRVQEA 828
>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
Length = 426
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 148/322 (45%), Gaps = 12/322 (3%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQA 187
R PS++ S +LS+I+K ++Y+ + F ME + G + +N+++
Sbjct: 4 SRPLPSIV---DFSKVLSKIAKSKNYDLVISLFHHME------VCGIGHDLYSYNIVINC 54
Query: 188 FCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C A SV K++ + P+ T++ L+ GF + V +M GFRP
Sbjct: 55 LCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPD 114
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
VV YN IDG CK G DA+ LF+ MER T +L+ G A +L
Sbjct: 115 VVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMR 174
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M R++ P++ + A+I ++ + AM+L +EM + + D TY+++ GL
Sbjct: 175 DMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHG 234
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
++ ++ D M+ +P T L+ FC + RVD G L+ + RG +
Sbjct: 235 RVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYN 294
Query: 427 LLVTGLCSRGRWEEAFECSKQM 448
++ G GR + A E +M
Sbjct: 295 TIIQGYFQAGRPDAAQEIFSRM 316
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 82/359 (22%), Positives = 168/359 (46%), Gaps = 13/359 (3%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
++ ++ L R F A ++ + + P ++T+ S+ I+ F +A
Sbjct: 47 SYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL------INGFCQGNRVFDAI 100
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
D + + +G R +N ++ C + +A +F ++ + T N L+ G
Sbjct: 101 DLVSKMEEMGFRP-DVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAG 159
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
SG + +MV+R P+V+T+ ID + K+G F +AM+L+EEM R P
Sbjct: 160 LCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPD 219
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T +LI+G + + +A+Q+ D M + PD+ YN +I+ + + ++ +L
Sbjct: 220 VFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFR 279
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM ++ + D +TY+T+ G ++ + +++ RM P RT +L+ C+N+
Sbjct: 280 EMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSILLYGLCMNW 336
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
RV+ L L+ + ++++ G+C G E+A++ + + + + SY
Sbjct: 337 RVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 395
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 133/293 (45%), Gaps = 10/293 (3%)
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FA 209
K + +E FDRMER+ G+R + +N L+ C +A + ++ R
Sbjct: 127 KIGLVNDAVELFDRMERD---GVRA-DAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIV 182
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN T ++ F + G + Y EM R P V TYN I+G C G +A ++
Sbjct: 183 PNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQM 242
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ M CLP + T TLI+G + + + +LF EM +R L D YN +I +
Sbjct: 243 LDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQ 302
Query: 330 CRDLNAAMELMDEMEEKRIGHDNV-TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+AA E+ M+ + N+ TY + +GL + +E L++ M + +
Sbjct: 303 AGRPDAAQEIFSRMDSR----PNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDIT 358
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
T +++ C V+ +L+ L +G P + +++G C + +W+++
Sbjct: 359 TYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKS 411
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 98/216 (45%), Gaps = 4/216 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+H M + G + +YNI I+ C+ F A+ + +M + P + T+++LI+G
Sbjct: 32 LFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFC 91
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ A L +M + +PD+ YN +I + +N A+EL D ME + D V
Sbjct: 92 QGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAV 151
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+++ GL S +L M+ VP T ++ F + + L+ +
Sbjct: 152 TYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEM 211
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
R P + L+ GLC GR +EA KQML
Sbjct: 212 TRRCVDPDVFTYNSLINGLCMHGRVDEA----KQML 243
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/276 (24%), Positives = 125/276 (45%), Gaps = 22/276 (7%)
Query: 117 RYFDQAWELMSHVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIF 170
R+ D A + V R P+++T ++ + + KF E ++ ++ M R ++F
Sbjct: 165 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFS---EAMKLYEEMTRRCVDPDVF 221
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT 229
+N L+ C + EA+ + ++++ P+ T N L+ GF +S V
Sbjct: 222 T---------YNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVD 272
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ EM RG +TYN I GY + G A +F M+ P+++T + L+
Sbjct: 273 EGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILL 329
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G + + +A LF+ M K ++ DI YN +I + + ++ A +L + K +
Sbjct: 330 YGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLK 389
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
D V+Y TM G + + LY +M E +P
Sbjct: 390 PDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425
>gi|255660942|gb|ACU25640.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 113/467 (24%), Positives = 192/467 (41%), Gaps = 62/467 (13%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL + N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 128 HVQRT----HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ + L L M+ K +E+++ F +ME +G+ + + ++
Sbjct: 70 DMPKKGLEWDEDLWVL-----MIDSYGKAGIVQESVKMFQKMEE---LGVER-TIKSYDA 120
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L + + A+ F K+LS P T N+++ GF SG V F+ +M R
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSRE 180
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VVTYN ++GYC+ +A + F EM+ P++ T TTLI G V + A
Sbjct: 181 IMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFG 361
+L +EM +KP+ Y+ ++ L ++ A ++ EM EK I DN + + G
Sbjct: 241 RLVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVEKYIAPTDNSIFMRLISG 300
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG---- 417
K+ L+ + MI + +L++ +C D + L +I++
Sbjct: 301 QCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILR 360
Query: 418 ------------------FCPHGH--------------------ALDLLVTGLCSRGRWE 439
C +G AL+ L+ G G +
Sbjct: 361 PQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420
Query: 440 EAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
AFE K ML R+ ++SY ++Q YL + + LD MI+N
Sbjct: 421 SAFELLKIMLRRKVDSEQSSYDSLVQSYLKKNEPADAKAALDSMIEN 467
>gi|147861320|emb|CAN83994.1| hypothetical protein VITISV_031191 [Vitis vinifera]
Length = 559
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 1/292 (0%)
Query: 180 EFNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN L+ +C + + R + +R P+ T ++L+ G + G + + EM
Sbjct: 262 SFNTLINGYCKSGNLDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEM 321
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG P+ VT+ I+G+C G M ++++M R P + T TLI+G V ++
Sbjct: 322 CDRGLVPNDVTFTTLINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDL 381
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A++L EM +R LKPD Y +I + DL +A+E+ EM ++ I DNV + +
Sbjct: 382 REAKKLVIEMTQRGLKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTAL 441
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + + + M+E P T M++ FC V G L + G
Sbjct: 442 ISGFCREGQVIEAERTLREMLEAGIKPDDATYTMVIHGFCKKGDVKTGFKLLKEMQCDGH 501
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
P ++L+ GLC +G+ + A ML + +Y +L +QA
Sbjct: 502 VPGVVTYNVLLNGLCKQGQMKNANMLLDAMLNLGVVPDDITYNILLERTLQA 553
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 106/441 (24%), Positives = 182/441 (41%), Gaps = 37/441 (8%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKA---LEFFKFTLQHPHFTPT 102
P +PLH +L + LP TP N L L + + L L FFK+ HF +
Sbjct: 50 PTKPLHSSLKRILPSLTP-------NHLIDLINLNPHSLSPPSLLSFFKWLSTQHHFRLS 102
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHV-------------------QRTHPSLLTLKSMS 143
++ H L + +A L+ V + TH S L S
Sbjct: 103 IHSYCTMTHFLCTHKMLSEAQSLLQFVVSRKGKNSASSVFTSVLEARGTHQSNLVF---S 159
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++++ + + + ++ F R+ R+ + I F S + L A + + +
Sbjct: 160 VLMNAYTDSGYFSDAIQCF-RLVRKHNLQI-PFHSCGY--LFDRLMKLNLTSPAWAFYEE 215
Query: 204 LLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+L + P+ N+L+ + + ++ + E+ RG RP+VV++N I+GYCK G
Sbjct: 216 ILDCGYPPDVCKFNVLMHRLCKEHKINEAQLLFGEIGKRGLRPTVVSFNTLINGYCKSGN 275
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
RL M P + T + LI+G + A +LF EM R L P+ +
Sbjct: 276 LDQGFRLKRFMMENRVFPDVFTYSVLINGLCKEGQLDDANKLFLEMCDRGLVPNDVTFTT 335
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + ME+ +M K + D +TY+T+ GL K L KL M +
Sbjct: 336 LINGHCVTGRADLGMEIYQQMLRKGVKPDVITYNTLINGLCKVGDLREAKKLVIEMTQRG 395
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T ML+ C ++ L + ++ G A L++G C G+ EA
Sbjct: 396 LKPDKFTYTMLIDGCCKEGDLESALEIRKEMVKEGIELDNVAFTALISGFCREGQVIEAE 455
Query: 443 ECSKQMLVRRRQVSEASYRML 463
++ML + +A+Y M+
Sbjct: 456 RTLREMLEAGIKPDDATYTMV 476
>gi|449436631|ref|XP_004136096.1| PREDICTED: uncharacterized protein LOC101205322 [Cucumis sativus]
Length = 1559
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 89/370 (24%), Positives = 173/370 (46%), Gaps = 12/370 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
++ EFF + F T + + + L IL + FD +W L++ ++++ + + I
Sbjct: 614 RSYEFFNWVESECKFDHTTETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRI 673
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE-EFNVLLQAFCTQKEMKEARSVFVK 203
+ R + E + A++R+ RE K E F L+ A C + + EA+ +
Sbjct: 674 LFKRYALAHLVSEAIAAYERL-REF-----KLRDETSFCNLIDALCESRHVDEAQELCFG 727
Query: 204 LLSRFAPNNKTM--NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ ++ T N++L G+ + G + F+ EM +G R + +Y+I +D CK G
Sbjct: 728 KNRKLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSG 787
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A++L++EM++ + T+IH G+ + A ++F EM + KP++ N
Sbjct: 788 KPWKAVKLYKEMKKKGMKLDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCN 847
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I A ++D+M ++ + +TYH F L K + + L+DRMI+
Sbjct: 848 TVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKP---KEILVLFDRMIKY 904
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
PK T VML++ F + +W + + G P+ A + L+ L +G + A
Sbjct: 905 GVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMA 964
Query: 442 FECSKQMLVR 451
+ ++M+ +
Sbjct: 965 RKYDEEMVAK 974
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/295 (21%), Positives = 123/295 (41%), Gaps = 26/295 (8%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
+F + L R+ D+A EL R + K +++L K + + + ++
Sbjct: 704 SFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLILRGWLKMGWWSKCRDFWEE 763
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILL----- 219
M+++ G+RK +++ + C + +A VKL ++++
Sbjct: 764 MDKK---GVRK-DLHSYSIYMDIQCKSGKPWKA----VKLYKEMKKKGMKLDVVAYNTVI 815
Query: 220 --LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+G E D + +HEM G +P+VVT N I +C+ G F DA + ++M +
Sbjct: 816 HAVGISEGVDFASR--VFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMMLDQMLKRD 873
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQ---LFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
C P++ T R++ + ++ LFD M K + P + Y ++ R L
Sbjct: 874 CQPNVITYHCFF------RSLEKPKEILVLFDRMIKYGVHPKMDTYVMLLRKFGRWGFLR 927
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ ++MEE + Y+ + L++ ++ K + M+ PK R
Sbjct: 928 PVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLRV 982
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 65/157 (41%), Gaps = 14/157 (8%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N +++ FC K+A + ++L R PN T + ++ ++ + + M+
Sbjct: 847 NTVIKLFCENGRFKDAHMMLDQMLKRDCQPNVITYHCFFRSLEKPKEILVL---FDRMIK 903
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P + TY + + + + G ++ +ME + C P+ LI I
Sbjct: 904 YGVHPKMDTYVMLLRKFGRWGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDM 963
Query: 301 ARQLFDEMPKRNLKPDI----------GAYNAMISSL 327
AR+ +EM + L P + G Y+A S++
Sbjct: 964 ARKYDEEMVAKGLSPKLRVELGTQMMNGGYHANCSTM 1000
>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
mitochondrial-like [Glycine max]
Length = 725
Score = 115 bits (288), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 82/344 (23%), Positives = 151/344 (43%), Gaps = 9/344 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F+ + +H L RM D+A L++ + + L + IS + +
Sbjct: 306 FSTDALTYGYLMHGLCRMGQVDEARALLNKIPNPNTVLYN--------TLISGYVASGRF 357
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
EA D + + + + + FN+++ + + A + ++++ RF PN T I
Sbjct: 358 EEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTI 417
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF + G + + M +G + V YN I CK G +A++LF EM
Sbjct: 418 LINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKG 477
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T +LI+G + +A L+ +M + + YN ++ + + + A
Sbjct: 478 CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAF 537
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+DEM + DN+TY+ + L K+ +E L++ M+ P + +L+
Sbjct: 538 KLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGL 597
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C +V+ L +I RG P + L+ GLC G +EA
Sbjct: 598 CRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEA 641
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 90/381 (23%), Positives = 155/381 (40%), Gaps = 52/381 (13%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P ++ +H L +A +L+ + P + T + L R + E
Sbjct: 237 VPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIH---E 293
Query: 158 TLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ DRM +R F ++ + L+ C ++ EAR++ K+ + PN
Sbjct: 294 AAKLLDRML------LRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPN---PNTVLY 344
Query: 216 NILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G+ SG A ++ Y+ MV+ G+ P T+NI IDG KKG A+ L EM
Sbjct: 345 NTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMV 404
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P++ T T LI+G + +A ++ + M + L + YN +I +L + ++
Sbjct: 405 AKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIE 464
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A++L EM K D T++++ GL K+ +E LY M + T T L+
Sbjct: 465 EALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLV 524
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
F + R ++AF+ +ML R
Sbjct: 525 HAFLM-----------------------------------RDSIQQAFKLVDEMLFRGCP 549
Query: 455 VSEASYRMLQRYLVQANANEK 475
+ +Y L + L + A EK
Sbjct: 550 LDNITYNGLIKALCKTGAVEK 570
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/300 (24%), Positives = 129/300 (43%), Gaps = 6/300 (2%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + ++ + ++A E+++ + SL T+ + ++ + K + EE
Sbjct: 408 FEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTV-GYNCLICALCKDGNIEEA 466
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNI 217
L+ F M + G + FN L+ C +M+EA S++ + L N T N
Sbjct: 467 LQLFGEMSGK---GCKP-DIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNT 522
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ F + EM+ RG +TYN I CK G + LFEEM
Sbjct: 523 LVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKG 582
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ + LI G ++ A + +M R L PDI YN++I+ L + + A
Sbjct: 583 IFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEAS 642
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
L ++++ + I D +TY+T+ C L + ++ F+P T +L+ +
Sbjct: 643 NLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYI 702
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 7/307 (2%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +NV+L + A +VF +LSR +P T +++ +V + +
Sbjct: 171 KSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLLRD 230
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ V Y I C+ +A++L E+M + C P +QT +IHG
Sbjct: 231 MAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGR 290
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
IH+A +L D M R D Y ++ L R ++ A L++++ + V Y+T
Sbjct: 291 IHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNKIPNP----NTVLYNT 346
Query: 358 MFFGLMKSSGLEGVCK-LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G + S E LY+ M+ + P T +++ + L L ++ +
Sbjct: 347 LISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAK 406
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEK 475
F P+ +L+ G C +GR EEA E M + ++ Y L L + N E
Sbjct: 407 RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEA 466
Query: 476 LEDLDRM 482
L+ M
Sbjct: 467 LQLFGEM 473
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 126/290 (43%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ FC Q ++EA + + ++ + N N L+ + G++ + EM
Sbjct: 415 YTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMS 474
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P + T+N I+G CK +A+ L+ +M + + T TL+H + +I
Sbjct: 475 GKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQ 534
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA +L DEM R D YN +I +L + + + L +EM K I ++ + +
Sbjct: 535 QAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILI 594
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL ++ + K MI P T L+ C V NL+ L G
Sbjct: 595 SGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIR 654
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P + L++ C G + +A + + +E ++ +L Y+V+
Sbjct: 655 PDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVK 704
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 127/279 (45%), Gaps = 14/279 (5%)
Query: 210 PNNKTMNILLLGFKESGDV--TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P K+ N++L GD A +FY +M+ RG P+V T+ + + C A
Sbjct: 168 PTFKSYNVVL-DILVDGDCPRVAPNVFY-DMLSRGVSPTVYTFGVVMKALCMVSEVDSAC 225
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +M + C+P+ TLIH + +A QL ++M +PD+ +N +I L
Sbjct: 226 SLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R ++ A +L+D M + D +TY + GL + ++ L ++ +P
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLNK------IPNP 339
Query: 388 RTVV--MLMKFFCVNFRVDLGLN-LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
TV+ L+ + + R + + L+ ++ G+ P + ++++ GL +G A E
Sbjct: 340 NTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALEL 399
Query: 445 SKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDRM 482
+M+ +R + + +Y +L + Q E E ++ M
Sbjct: 400 LNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSM 438
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 58/263 (22%), Positives = 97/263 (36%), Gaps = 1/263 (0%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
T+ME+F +G+ + + ID G F +L ++M+ L +
Sbjct: 81 TSMELFQRAGAQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILI 140
Query: 289 IHGAGLVRNIHQA-RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
+ G QA R L D + P +YN ++ L+ A + +M +
Sbjct: 141 MKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRG 200
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ T+ + L S ++ C L M + VP + L+ C N RV L
Sbjct: 201 VSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEAL 260
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L + P + ++ GLC GR EA + +ML+R +Y L L
Sbjct: 261 QLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGL 320
Query: 468 VQANANEKLEDLDRMIKNLQAVL 490
+ ++ L I N VL
Sbjct: 321 CRMGQVDEARALLNKIPNPNTVL 343
>gi|255660832|gb|ACU25585.1| pentatricopeptide repeat-containing protein [Aloysia virgata]
gi|410109881|gb|AFV61020.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
virgata]
Length = 418
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 160/380 (42%), Gaps = 79/380 (20%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H + P D K L L +++YF W
Sbjct: 85 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE L+ ++ FN+L+ FC + +++ A+ VF +
Sbjct: 124 ---------YEEILDC--GYPASLYF---------FNILMHRFCKEGDIRVAQLVF-NAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ GD+ M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G R + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANGLFDEMLDKGLVPNGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQE-- 340
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
N R+D A L++GLC GR+ +A +
Sbjct: 341 ----------------NIRLD-----------------DVAYTALISGLCQEGRYLDAEK 367
Query: 444 CSKQMLVRRRQVSEASYRML 463
++ML + +Y M+
Sbjct: 368 VLREMLSVGLKPDTGTYTMI 387
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 124/262 (47%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F + + PS+ + TL++G
Sbjct: 123 FYEEILDCGYPASLYFFNILMHRFCKEGDIRVAQLVFNAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 RLGDLDEGFRLKSAMHASGVQPDVYTYSVLINGLCKESKMDDANGLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
+ D +++++ + +V L P T
Sbjct: 361 -RYLDAEKVLREMLSVGLKPDT 381
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 100/255 (39%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ R+ D+ + L S H P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHASGVQPDVYT---YSVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
FD M + V F L+ C + + A ++ ++LS+ +P+ T N
Sbjct: 226 NGLFDEMLDKGLVP----NGVTFTTLIAGHCKNRRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G + GD+ EM ++G +P +TY N
Sbjct: 282 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEN 341
Query: 252 IRID---------GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR+D G C++G + DA ++ EM V P T T +I+ ++
Sbjct: 342 IRLDDVAYTALISGLCQEGRYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLLKEMQRDGHVPSV 416
>gi|224118166|ref|XP_002317747.1| predicted protein [Populus trichocarpa]
gi|222858420|gb|EEE95967.1| predicted protein [Populus trichocarpa]
Length = 498
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 119/496 (23%), Positives = 202/496 (40%), Gaps = 74/496 (14%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMR 117
P P L L + N A + F + + HP F+ T D + + L+R R
Sbjct: 4 PPIKPWPQRLYPKRLISMITHQENLDLAFQIFDYAGKYHPGFSHTYDTYHSIIDKLSRAR 63
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE-TLEAFDRMERE-------- 168
FD L+S + R + + I + R L+ F R++ E
Sbjct: 64 AFDGVESLLSQLSRNSSHIKCGDDVFISVIRNYGLAGRPRLALKTFTRIKEEFSMQPSVK 123
Query: 169 -------IFVGIRKF---GSE---------------EFNVLLQAFCTQKEMKEARSVFVK 203
+FV +++ GS FN+L++A C + +++ A VF +
Sbjct: 124 LLNTLLNVFVQNKRYHLVGSTLKNCKDKYGVLPNVFSFNILIKALCKKNDVENALKVFDE 183
Query: 204 LLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + PN T +L GF GD+ E + E+ +G+ P TY + + GYCK+G
Sbjct: 184 MPTMGMIPNLVTYTTILGGFVSRGDLVNAEKVFSEISDKGWLPDATTYTVLMVGYCKQGR 243
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM-------------- 308
DA+++ + ME P+ T +I + +AR L D+M
Sbjct: 244 LSDAIKVMDNMEYNGVEPNEVTYGVMIDAYCKEKKSGEARNLIDDMLDKKFLPSSTLCCK 303
Query: 309 -----------------PKRNLKPDIGAYNAMISSLIR--CRD--LNAAMELMDEMEEKR 347
KR L+ + NA++S+LI C++ + A +L DE E+
Sbjct: 304 VIDVLCEDGKVENACHLWKRMLEKNCLPDNAIMSTLIHWLCKEGKVWEARKLFDEFEQGT 363
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
I +TY+T+ G+ + L +L+D M+E + P T ML+K F V G+
Sbjct: 364 I-PSLMTYNTLIAGMCERGELNEAGRLWDDMVEKRCRPNAFTYNMLIKGFMKAGVVKEGV 422
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ ++D G P+ LL+ GL G E + M + R+V S+ + +
Sbjct: 423 RILEEMLDNGCLPNKSTYTLLIEGLQESGM-EGDVDKVMSMAMASREVDADSWDLFLHKI 481
Query: 468 VQANANEKLEDLDRMI 483
V N + LDR++
Sbjct: 482 V-GNLDCGTGALDRLL 496
>gi|414586855|tpg|DAA37426.1| TPA: hypothetical protein ZEAMMB73_447866 [Zea mays]
Length = 484
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 129/300 (43%), Gaps = 36/300 (12%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+ +FN+L++ ++ AR+VF ++L R P T N L+ G ++ D+
Sbjct: 114 ARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFNTLMSGMCKASDLNNANALRG 173
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG----- 291
M G P V TY I G CK G DAM +FEEM P+ +TTLI
Sbjct: 174 LMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEG 233
Query: 292 ---AGL---------------------------VRNIHQARQLFDEMPKRNLKPDIGAYN 321
AGL VR++ A + +EM K LKPD Y
Sbjct: 234 DVTAGLELRWEMATRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYT 293
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + +L+ AME+ EM ++ + D+VTY + GL K+ ++ M+E
Sbjct: 294 TLIDGCCKEGELDTAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEA 353
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T M++ FC N V G + ++G P ++++ G CS G+ + A
Sbjct: 354 GLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNA 413
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 100/259 (38%), Gaps = 36/259 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ +Q C +++A +F ++ R PN + L+ + GDVTA EM
Sbjct: 187 YGAFIQGLCKTGRIQDAMEMFEEMCERGLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMA 246
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA------- 292
RG + +V YN ++G+C+ A + EEM + P T TTLI G
Sbjct: 247 TRGVKADLVAYNALVNGFCRVRDMKAANDIVEEMRKDGLKPDKVTYTTLIDGCCKEGELD 306
Query: 293 ----------------------GLVRNIHQARQLFD------EMPKRNLKPDIGAYNAMI 324
L+ + +A + D EM + L+PD Y +I
Sbjct: 307 TAMEMKQEMSDEGVALDDVTYTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVI 366
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + D+ + + EM+ K VTY+ + G ++ L + M+
Sbjct: 367 DAFCKNGDVKTGFKHLKEMQNKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVC 426
Query: 385 PKTRTVVMLMKFFCVNFRV 403
P T +L+ C + +V
Sbjct: 427 PNDITYNILLDGHCKHGKV 445
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/153 (22%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +A + +++ + P+N T +++ F ++GDV EM
Sbjct: 327 YTALISGLSKAGRSVDAERILCEMMEAGLQPDNTTYTMVIDAFCKNGDVKTGFKHLKEMQ 386
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVR 296
+G P +VTYN+ ++G+C G +A L M + P+ T L+ G G VR
Sbjct: 387 NKGKNPGIVTYNVVMNGFCSLGQMKNADMLLNAMLNIGVCPNDITYNILLDGHCKHGKVR 446
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ + + + + D G Y ++I+ ++
Sbjct: 447 DTEELKS------AKGMVSDFGVYTSLINEFVK 473
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/167 (20%), Positives = 69/167 (41%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ +A + + + P+ +N ++ +IR L +A + DEM + + VT++
Sbjct: 94 SVPEAYAFYLHLLDAGVPPEARQFNMLMRDMIRSGKLASARNVFDEMLRRGVQPTVVTFN 153
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G+ K+S L L M + P T ++ C R+ + ++ + +R
Sbjct: 154 TLMSGMCKASDLNNANALRGLMAKAGIAPDVYTYGAFIQGLCKTGRIQDAMEMFEEMCER 213
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P+ L L+ C G E +M R + +Y L
Sbjct: 214 GLNPNTVVLTTLIDAHCKEGDVTAGLELRWEMATRGVKADLVAYNAL 260
>gi|224111364|ref|XP_002315827.1| predicted protein [Populus trichocarpa]
gi|222864867|gb|EEF01998.1| predicted protein [Populus trichocarpa]
Length = 472
Score = 115 bits (288), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 95/388 (24%), Positives = 171/388 (44%), Gaps = 20/388 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY----F 119
L++ LV NVLGRL H + FF + +++ P A+ + + IL +Y F
Sbjct: 27 LTTDLVLNVLGRL---HFEEKTSFRFFMWAGHQKNYSHEPCAYNEMIDILTSTKYKARQF 83
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
+++ +++R + +++ ++ + +L + + Y ++ F + +R IR
Sbjct: 84 RIVCDMLDYMKRNNKNVVPVEVLLTILRNYT--EKYLTRVQKFAKKKR-----IRVKTQP 136
Query: 180 E---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
E FN+LL A C ++A +F ++ ++ P+ T N++ G+ + T
Sbjct: 137 EINAFNLLLDALCKCCLAEDAEGLFKRVKNKVKPDANTYNVMFFGWCRVRNPTRGMKVLE 196
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME-RVACLPSLQTITTLIHGAGLV 295
EM+ G P TY ID +C+ G +A LFE M + + + S T I LV
Sbjct: 197 EMIQLGHTPDSFTYITAIDAFCRAGMVNEAAELFEFMRTKGSTMSSPTAKTYAIMIGALV 256
Query: 296 RN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
RN + + +L ++M PD+ + +I + ++ A + EM K D V
Sbjct: 257 RNNRMDECFKLLEDMINSGCLPDVSTFKELIEGMCSAGKIDEAYRFLQEMGNKGYPPDIV 316
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ L ++ E +LY+RMIE P +T ML+ F D W +
Sbjct: 317 TYNCFLKVLCENKNSEEALRLYERMIEAGCFPSVQTHNMLISMFFEMGDPDGAFETWYEM 376
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEA 441
RG +++ GL + E+A
Sbjct: 377 DKRGCAQDVDTYIVMIDGLFGCNKVEDA 404
>gi|410109871|gb|AFV61015.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
barbata]
Length = 429
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 155/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D +K L L +++YF W + +I+
Sbjct: 89 AIECYRLTREHKLRVPF-DTCKKVLEHLMKLKYFKLVWGFXXXIXXX-GXXXXXXFFNIL 146
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RSV 200
+ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 147 MHRFCK--------DGDIRIAQSVFDAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLK 198
Query: 201 FVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G KES A E+F EM+++G P+ VT+ IDG+CK
Sbjct: 199 SAMLASGVQPDVYTYSVLINGLCKESKMDDANELF-DEMLVKGLXPNGVTFTTLIDGHCK 257
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + LK D
Sbjct: 258 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKIT 317
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+AA E M ++ I D+V Y + GL + K+ M+
Sbjct: 318 YTTLIDGCCKEGDLDAAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 377
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 378 SVGLKPDTXTYTMIINEFCKKGDVWKGSKLLKDMQRNGHAPSVVTYNVLMNG 429
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 131/285 (45%), Gaps = 38/285 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L+ FC +++ A+SVF ++++ P+ + N L+ G+ GD+ M
Sbjct: 143 FNILMHRFCKDGDIRIAQSVF-DAIAKWGLRPSVVSYNTLMNGYIRLGDLNEGFRLKSAM 201
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G +P V TY++ I+G CK+ DA LF+EM P+ T TTLI G +
Sbjct: 202 LASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLXPNGVTFTTLIDGHCKNGRV 261
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +++ +M ++L PD+ YN +I L + DL A +L+DEM K + D +TY T+
Sbjct: 262 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKXDKITYTTL 321
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K L+ + RMI+ N R+D
Sbjct: 322 IDGCCKEGDLDAAFEHRKRMIQE------------------NIRLD-------------- 349
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
A L++GLC GR +A + ++ML + +Y M+
Sbjct: 350 ---DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDTXTYTMI 391
>gi|293332689|ref|NP_001168961.1| hypothetical protein [Zea mays]
gi|223974035|gb|ACN31205.1| unknown [Zea mays]
gi|413921836|gb|AFW61768.1| hypothetical protein ZEAMMB73_696968 [Zea mays]
Length = 521
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 94/353 (26%), Positives = 160/353 (45%), Gaps = 19/353 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P P+A+ + + R FD AWE++ ++ +LT + M I++ R + + ++
Sbjct: 134 PPPEAWHLAVWAAGKARRFDLAWEIVRRMRNR--GVLTCRVMVILMERYAAASEVNKAIK 191
Query: 161 AFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNI 217
FD ME+ K S++ F LL A C K +++A + L +F P + NI
Sbjct: 192 TFDVMEK------FKIESDQSVFYSLLHALCKIKNIEDAEELLF-LRKKFFPLTAEGFNI 244
Query: 218 LLLGFKES-GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+L G+ DV + + EM P ++Y + I + K G D +R+++EM++
Sbjct: 245 ILDGWCNVITDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFDTLRVYDEMKKR 304
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P + +L++ + A +F ++ L+PD+ YN MI L L+ A
Sbjct: 305 GWIPGIVVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIVPLCESCKLDEA 364
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM-K 395
++M+ M + I TYH +K G++ KL +M E PK+ T VML+ K
Sbjct: 365 RKVMESMILRGIVPTISTYH----AFLKQEGIDESLKLLQKMKEDGCGPKSDTFVMLIDK 420
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
FF +N + L +W + P LV GL G A E +M
Sbjct: 421 FFLLNESGN-ALRVWNEMRKYEISPVRAHYMTLVQGLVKHGCIPRALEYYDEM 472
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 102/212 (48%), Gaps = 9/212 (4%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S ++M+S SK + +TL +D M++ ++ G +N L+ + +K+A ++
Sbjct: 277 SYTLMISCFSKVGNLFDTLRVYDEMKKRGWIP----GIVVYNSLVYVLTRENCVKDAHNI 332
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F KL P+ +T N +++ ES + M+LRG P++ TY+ + K
Sbjct: 333 FSKLTDEGLQPDVETYNNMIVPLCESCKLDEARKVMESMILRGIVPTISTYH----AFLK 388
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+ ++++L ++M+ C P T LI L+ A ++++EM K + P
Sbjct: 389 QEGIDESLKLLQKMKEDGCGPKSDTFVMLIDKFFLLNESGNALRVWNEMRKYEISPVRAH 448
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
Y ++ L++ + A+E DEM+EK D
Sbjct: 449 YMTLVQGLVKHGCIPRALEYYDEMKEKGFASD 480
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/232 (20%), Positives = 92/232 (39%), Gaps = 5/232 (2%)
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I ++ Y A++ F+ ME+ +L+H ++NI A +L + K+
Sbjct: 175 ILMERYAAASEVNKAIKTFDVMEKFKIESDQSVFYSLLHALCKIKNIEDAEELL-FLRKK 233
Query: 312 NLKPDIGAYNAMISSLIRC-RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+N ++ D+ A + EM I D ++Y M K L
Sbjct: 234 FFPLTAEGFNIILDGWCNVITDVAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGNLFD 293
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
++YD M + ++P L+ V N++ L D G P + ++
Sbjct: 294 TLRVYDEMKKRGWIPGIVVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNNMIV 353
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
LC + +EA + + M++R + ++Y +L Q +E L+ L +M
Sbjct: 354 PLCESCKLDEARKVMESMILRGIVPTISTY---HAFLKQEGIDESLKLLQKM 402
>gi|413937640|gb|AFW72191.1| hypothetical protein ZEAMMB73_762171 [Zea mays]
Length = 503
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 97/384 (25%), Positives = 166/384 (43%), Gaps = 80/384 (20%)
Query: 86 ALEFFKFTLQHPH-FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
AL FF + ++ TP A + + +L + R D+ W+L+S + L+T+ +++
Sbjct: 101 ALGFFLWAQSRGGGYSHTPYACSRMVDLLGKTRQIDRMWDLLSEMH--CRGLVTVDTVAK 158
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ R++ + + + + FD++E +G+ + +E NVLL A C +K+++ AR VFV L
Sbjct: 159 SIRRLAAARKWRDAILLFDQLED---LGLER-NTETMNVLLDALCKEKKVELAREVFVML 214
Query: 205 LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK----- 259
AP+ T NI + G+ + EM RGF P V+TY ++ YCK
Sbjct: 215 SPHIAPDAYTFNIFVHGWCSVRRIDEALWTIEEMKTRGFPPIVITYTAVLEAYCKQRNFR 274
Query: 260 -----------KGC-------------------FGDAMRLFEEMERVACLPSLQTITTLI 289
+GC F +A+ + + M+ C P LI
Sbjct: 275 RVYEVLDSMGSQGCHPNVITYTMIMTSLTKCERFEEALSVSDRMKSSGCKPDTLFYNALI 334
Query: 290 HGAGLVRNIHQARQLFD-EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G ++ +A Q+F EMP+ + ++ YN MIS L + + A+ ++ EME +
Sbjct: 335 NLLGRAGHLFEANQVFRVEMPRNGVLRNVATYNTMISILCQYGRDDDALGVLKEMEAQSC 394
Query: 349 GHDNVTY-----------------HTMFFGLMKSSGL-----------EGVCK------- 373
D TY H + L +GL G+CK
Sbjct: 395 KPDLQTYQPLLRLLLGRRGQAAAVHRLLSELRDRNGLGLDLDTYTLLIHGLCKVGETDWA 454
Query: 374 --LYDRMIEGKFVPKTRTVVMLMK 395
LYD M+ + VP+ RT +L+
Sbjct: 455 YLLYDEMVGSEIVPRPRTCELLLS 478
>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
Length = 833
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 136/282 (48%), Gaps = 2/282 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ A C + ++ EA VF K+ + PN+ T +IL+ G E+G + EMV +
Sbjct: 169 LVLANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 228
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +PS TY + I C G AM++ +EM AC+P++ T T LI I +A
Sbjct: 229 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 288
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F +M K L P I +NA+I+ + + +A +L+ ME+ + TY+ + G
Sbjct: 289 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 348
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + S L R+++ +P T +L+ FC ++++ N++ + G P
Sbjct: 349 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 408
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G L+ GLC GR E+A M+ + + E ++ L
Sbjct: 409 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 450
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 6/323 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D+A +++ + T + + + +I++ R+ + EE F +M + G
Sbjct: 251 DKAMKMLDEMA-TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP----GII 305
Query: 180 EFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN L+ +C + + A + V PN +T N L+ G + +
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 365
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P VTYNI +DG+CK+G A +F M P T T LI G + +
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA + M K+ + D + A+I + L + M E R T++
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 485
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L + +M++ VP T +L++ C L L + + G
Sbjct: 486 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 545
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P+ + +++ GLC+ GR EEA
Sbjct: 546 SPNVYTYTIIINGLCNNGRVEEA 568
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRF-----APNNKTMNILLLGFKESGDVTAMEMFYHE 237
+L++ C E ++ +K+L R +PN T I++ G +G V E
Sbjct: 519 ILIEGHCRAGET----ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 574
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ TY + + + K G A ++ M + C P+ + L+ G L
Sbjct: 575 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 634
Query: 298 IHQARQLFD--EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
AR L ++ R+L + N + S + R D++ A+++ DE+++ + +++ Y
Sbjct: 635 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 693
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL K + +L M++ P + + +++ +C + D L ++D
Sbjct: 694 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLD 752
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
F P + ++ GL + GR +EA
Sbjct: 753 NKFVPSFASYCWVIHGLRNEGRVQEA 778
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 1/292 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C + +A + +++ P+ T NIL+ GF + G + ++ M
Sbjct: 342 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 401
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P T+ IDG CK G A + M + T T LI G +
Sbjct: 402 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 461
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF+ M + +N + +L + LN A ++ +M + + VT+ +
Sbjct: 462 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 521
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ K+ +RM + P T +++ C N RV+ + + G
Sbjct: 522 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 581
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
P+ +LV GR + AF+ M+ Q + Y L V +N
Sbjct: 582 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 633
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/213 (23%), Positives = 87/213 (40%), Gaps = 3/213 (1%)
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE-EMERVACLPSLQTITTLIHG 291
+ Y MV GF + Y ++ CK G F A +F ++ R+ T+L+
Sbjct: 114 LVYRRMVNEGFVLGGIDYRTVVNALCKNG-FVQAAEMFCCKVLRLGFGLDTHVCTSLVLA 172
Query: 292 AGLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
++ +A ++F++M K + +P+ Y+ +I L L A +L EM EK
Sbjct: 173 NCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQP 232
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
TY + + K+ D M VP T +L+ C +++ ++
Sbjct: 233 STRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVF 292
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
++ G CP + L+ G C G AF+
Sbjct: 293 RKMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 325
>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Vitis vinifera]
Length = 822
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 102/405 (25%), Positives = 177/405 (43%), Gaps = 19/405 (4%)
Query: 50 LHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
L+ +L Q + L+ + N+L + L + F++ L +PD F T
Sbjct: 185 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-------SPDVFTYT 237
Query: 110 LHILA--RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
IL R R D A+ + + + P+ +T ++ I+ + EA D +
Sbjct: 238 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL------INGLCNEGRVDEALDML 291
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKE 224
E I GI + + + A C + +EA + ++ R PN +T L+ G
Sbjct: 292 EEMIEKGIEP-TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 350
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G + YH+M+ G P+ VTYN I+ C G F A+++F ME L + QT
Sbjct: 351 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 410
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+I G L +I +A LF++M K P + YN +I+ + ++N A L+D M+
Sbjct: 411 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 470
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
E D TY+ + G K LE + M+E P + L+ + +VD
Sbjct: 471 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVD 530
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ L+L + + G P+ + + ++ GL R+ EA + +M+
Sbjct: 531 IALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMV 575
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 136/305 (44%), Gaps = 5/305 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+++ + ++S +S+ E + + +M +E V + +N L+ C A
Sbjct: 337 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP----NTVTYNALINELCVGGRFSTA 392
Query: 198 RSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+F + + N +T N ++ G GD+ + + +M+ G P+VVTYN I+G
Sbjct: 393 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 452
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y KG +A RL + M+ C P T L+ G + A F EM + L P+
Sbjct: 453 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 512
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+Y A+I + ++ A+ L+ MEE + +Y+ + GL K + K+ D
Sbjct: 513 PVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 572
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M+E +P T L+ C N R ++ + R P+ + L+ GLC G
Sbjct: 573 KMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 632
Query: 437 RWEEA 441
+ +EA
Sbjct: 633 KADEA 637
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 22/424 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L + + + A H + ++FF + + P + + F L+ L R R F A
Sbjct: 69 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA- 127
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
H +L +K+ ++ EE D + +G F N
Sbjct: 128 --------DHIRILMIKAC----------RNEEEIRRVADFLNEISGMGF-GFSLYSCNT 168
Query: 184 LLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL + ++ AR+++ ++L S P+ T N L+ + G V E+ ++
Sbjct: 169 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 228
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P V TY I G+C+ A +F+ M + C P+ T +TLI+G + +A
Sbjct: 229 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 288
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +EM ++ ++P + Y I++L A+EL+ M+++ + TY + GL
Sbjct: 289 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 348
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ LE LY +M++ VP T T L+ CV R L ++ ++ G +
Sbjct: 349 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 408
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDR 481
+ ++ GLC G E+A ++ML + +Y ++ YL + N N LD
Sbjct: 409 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 468
Query: 482 MIKN 485
M +N
Sbjct: 469 MKEN 472
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 137/315 (43%), Gaps = 32/315 (10%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + T+ + A R + + + P+ T N L+ GF + G + + ++ EMV
Sbjct: 446 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 505
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V+Y IDG+ K G A+ L + ME + C P++++ +I+G
Sbjct: 506 ECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFS 565
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ D+M ++ L P++ Y +I L R A ++ +ME+++ + TY ++
Sbjct: 566 EAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 625
Query: 360 FGLMK----------------------SSGLEGVCK---------LYDRMIEGKFVPKTR 388
+GL + S+ + G+C+ L M E F P
Sbjct: 626 YGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDRE 685
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ C N VD L ++ + +GF H L+ LC G+ EEA M
Sbjct: 686 IYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNM 745
Query: 449 LVRRRQVSEASYRML 463
L + E + +L
Sbjct: 746 LEKEWNADEIVWTVL 760
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 66/250 (26%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN ++ N ++ G + + E +MV +G P+V+TY IDG C+ G A ++
Sbjct: 546 PNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 605
Query: 270 FEEMERVACLPSLQTITTLIHG-----------------------------AGLVRN--I 298
F +ME+ CLP+L T ++LI+G +GL R
Sbjct: 606 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAERMSEIGCEPTLDTYSTLVSGLCRKGRF 665
Query: 299 HQARQLFDEMPKRNLKPD-----------------------------------IGAYNAM 323
++A QL +M +R PD + Y A+
Sbjct: 666 YEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRAL 725
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I +L + + A L D M EK D + + + GL+K L+ KL M F
Sbjct: 726 ICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNF 785
Query: 384 VPKTRTVVML 393
P +T V+L
Sbjct: 786 TPNIQTYVIL 795
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/261 (21%), Positives = 104/261 (39%), Gaps = 18/261 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P +++ ++ L++ F +A ++ + Q P+++T ++ L R + Q
Sbjct: 545 NPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQF--- 601
Query: 158 TLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKT 214
+ F ME R+ + + S L+ C + + EA +S P T
Sbjct: 602 AFKIFHDMEKRKCLPNLYTYSS-----LIYGLCQEGKADEAER-----MSEIGCEPTLDT 651
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+ L+ G G E +M RGF P Y + +CK A+++F +E
Sbjct: 652 YSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIE 711
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
L LI + +A+ LFD M ++ D + ++ L++ +L+
Sbjct: 712 AKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELD 771
Query: 335 AAMELMDEMEEKRIGHDNVTY 355
M+L+ ME K + TY
Sbjct: 772 LCMKLLHIMESKNFTPNIQTY 792
>gi|297837133|ref|XP_002886448.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
gi|297332289|gb|EFH62707.1| hypothetical protein ARALYDRAFT_475066 [Arabidopsis lyrata subsp.
lyrata]
Length = 332
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 126/276 (45%), Gaps = 1/276 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ C + + EA ++ +++ PN T ++ G + GD + +M
Sbjct: 13 FNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMD 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ VV Y ID CK G A LF EM P++ T +I G
Sbjct: 73 ESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKWT 132
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A QL +M + N+ PD+ +NA+I++ ++ ++ A EL EM + I D +TY+++
Sbjct: 133 DAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSLI 192
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K S L+ ++D M+ P T+ L+ C RVD G+ L ++ RG
Sbjct: 193 DGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGLV 252
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
P + + L+ G C G A + ++M+ + R +
Sbjct: 253 PDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWI 288
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 5/278 (1%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G G V E MV G +P+ VTY ++G CK G A+ L +M+
Sbjct: 14 NTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGDTDSALNLLRKMDE 73
Query: 276 VACLPSLQTITTLIHGAGLVRNIH--QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ T +I L ++ H +A+ LF EM + + P++ YN MI
Sbjct: 74 SHIKADVVIYTAIIDR--LCKDGHHSKAQNLFTEMHDKGIFPNVLTYNCMIDGCCSYGKW 131
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A +L+ +M E + D VT++ + +K + +LY M+ P T T L
Sbjct: 132 TDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYREMLGRNIFPDTITYNSL 191
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FC + R+D +++ ++ +G P+ ++ L+ G C R ++ + +ML R
Sbjct: 192 IDGFCKHSRLDDAKHIFDLMVSKGGSPNVITINTLIGGCCRAKRVDDGIKLLHEMLRRGL 251
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVL 490
SY L QA +DL MI ++ +L
Sbjct: 252 VPDSVSYNTLIHGFCQAGDLNAAQDLFQEMISQVRWIL 289
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 73/174 (41%)
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M ++ + D+ A+N +++ L R + A L+D M E + VTY T+ G+ K
Sbjct: 1 MVEKGCQHDVVAFNTLMNGLCREGRVLEAEALVDRMVENGHQPNEVTYGTIVNGMCKMGD 60
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ L +M E ++ C + NL+ + D+G P+ +
Sbjct: 61 TDSALNLLRKMDESHIKADVVIYTAIIDRLCKDGHHSKAQNLFTEMHDKGIFPNVLTYNC 120
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
++ G CS G+W +A + + M+ ++ L V+ + E+L R
Sbjct: 121 MIDGCCSYGKWTDAEQLLRDMIESNVDPDVVTFNALINAFVKEGKISEAEELYR 174
>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
Length = 375
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 150/322 (46%), Gaps = 6/322 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+NVL+ C + + EA F+ + + PN T NI+L +G E EM
Sbjct: 54 YNVLVNGMCKEGRLDEAIK-FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEM 112
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V +G PSVVT+NI I+ C+KG G A+ + E+M C P+ + L+HG + +
Sbjct: 113 VRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKM 172
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A Q + M R PDI YN M+++L + ++AA+EL++++ K +TY+T+
Sbjct: 173 DRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTV 232
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K + +L M P T L+ +V+ + + + G
Sbjct: 233 IDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGV 292
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLE 477
P+ + ++ GLC + + A + M+ + + +E SY +L + A E LE
Sbjct: 293 KPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALE 352
Query: 478 DLDRMIKNLQAVLPPPTRQQVA 499
L+ + + V+ + +QV
Sbjct: 353 LLNELCS--RGVVKKSSAEQVV 372
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 109/235 (46%), Gaps = 2/235 (0%)
Query: 210 PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T IL+ ESG AM++ EM RG +P VVTYN+ ++G CK+G +A++
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLL-DEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIK 72
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
M P++ T ++ A +L EM ++ P + +N +I+ L
Sbjct: 73 FLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLC 132
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R L A++++++M ++++Y+ + G K ++ + + M+ P
Sbjct: 133 RKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIV 192
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T ++ C + +VD + L L +G P + ++ GL G+ ++A E
Sbjct: 193 TYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVE 247
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 122/282 (43%), Gaps = 16/282 (5%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARM----RYFDQAWELMSHVQR--THPSLLTLKS 141
E KF P + P+ + IL M R+ D A +L++ + R PS++T
Sbjct: 69 EAIKFLNSMPSYGSQPNVITHNI-ILRSMCSTGRWMD-AEKLLTEMVRKGCSPSVVTFNI 126
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ L R A D +E+ G S +N LL FC +K+M A
Sbjct: 127 LINFLCRKGLLG------RAIDILEKMPTHGCTP-NSLSYNPLLHGFCKEKKMDRAIQYL 179
Query: 202 VKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++SR P+ T N +L + G V A +++ +G P ++TYN IDG K
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ L EM P + T ++LI G + +A + F ++ +KP+ Y
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
N+++ L + + + A++ + M K V+Y + G+
Sbjct: 300 NSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGI 341
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/204 (24%), Positives = 91/204 (44%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P V+TY I I+ C + G AM+L +EM C P + T L++G + +A +
Sbjct: 14 PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ MP +P++ +N ++ S+ A +L+ EM K VT++ + L +
Sbjct: 74 LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
L + ++M P + + L+ FC ++D + ++ RG P
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193
Query: 425 LDLLVTGLCSRGRWEEAFECSKQM 448
+ ++T LC G+ + A E Q+
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQL 217
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 76/175 (43%), Gaps = 2/175 (1%)
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P + T T LI + QA +L DEM R KPD+ YN +++ + + L+ A+
Sbjct: 12 CYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAI 71
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ ++ M NV H + M S+G KL M+ P T +L+ F
Sbjct: 72 KFLNSMPSYG-SQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINF 130
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C + +++ + G P+ + + L+ G C + + A + + M+ R
Sbjct: 131 LCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSR 185
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 58/133 (43%)
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
ME++D EK D +TY + SG+ KL D M P T +L+
Sbjct: 1 MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C R+D + + G P+ ++++ +CS GRW +A + +M+ + S
Sbjct: 61 MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120
Query: 457 EASYRMLQRYLVQ 469
++ +L +L +
Sbjct: 121 VVTFNILINFLCR 133
>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
mitochondrial [Vitis vinifera]
Length = 876
Score = 115 bits (287), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 2/282 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLS--RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ A C + ++ EA VF K+ PN+ T +IL+ G E+G + EMV +
Sbjct: 212 LVLANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEK 271
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G +PS TY + I C G AM++ +EM AC+P++ T T LI I +A
Sbjct: 272 GCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEA 331
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+F +M K L P I +NA+I+ + + +A +L+ ME+ + TY+ + G
Sbjct: 332 NGVFRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEG 391
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L + S L R+++ +P T +L+ FC ++++ N++ + G P
Sbjct: 392 LCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPD 451
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G L+ GLC GR E+A M+ + + E ++ L
Sbjct: 452 GFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTAL 493
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 131/323 (40%), Gaps = 6/323 (1%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
D+A +++ + T + + + +I++ R+ + EE F +M + G
Sbjct: 294 DKAMKMLDEMA-TKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCP----GII 348
Query: 180 EFNVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN L+ +C + + A + V PN +T N L+ G + +
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 408
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P VTYNI +DG+CK+G A +F M P T T LI G + +
Sbjct: 409 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA + M K+ + D + A+I + L + M E R T++
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCF 528
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L + +M++ VP T +L++ C L L + + G
Sbjct: 529 LDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGC 588
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P+ + +++ GLC+ GR EEA
Sbjct: 589 SPNVYTYTIIINGLCNNGRVEEA 611
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 118/266 (44%), Gaps = 13/266 (4%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRF-----APNNKTMNILLLGFKESGDVTAMEMFYHE 237
+L++ C E ++ +K+L R +PN T I++ G +G V E
Sbjct: 562 ILIEGHCRAGET----ALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFS 617
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M G P+ TY + + + K G A ++ M + C P+ + L+ G L
Sbjct: 618 MSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNT 677
Query: 298 IHQARQLFD--EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
AR L ++ R+L + N + S + R D++ A+++ DE+++ + +++ Y
Sbjct: 678 AIGARALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-Y 736
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + GL K + +L M++ P + + +++ +C + D L ++D
Sbjct: 737 NFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLD 795
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
F P + ++ GL + GR +EA
Sbjct: 796 NKFVPSFASYCWVIHGLRNEGRVQEA 821
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/292 (21%), Positives = 114/292 (39%), Gaps = 1/292 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C + +A + +++ P+ T NIL+ GF + G + ++ M
Sbjct: 385 YNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMN 444
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P T+ IDG CK G A + M + T T LI G +
Sbjct: 445 SAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAK 504
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF+ M + +N + +L + LN A ++ +M + + VT+ +
Sbjct: 505 DVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILI 564
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++ K+ +RM + P T +++ C N RV+ + + G
Sbjct: 565 EGHCRAGETALSLKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVS 624
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
P+ +LV GR + AF+ M+ Q + Y L V +N
Sbjct: 625 PNHFTYAVLVKAHVKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSN 676
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 84/212 (39%), Gaps = 1/212 (0%)
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ Y MV GF + Y ++ CK G A ++ R+ T+L+
Sbjct: 157 LVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLAN 216
Query: 293 GLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ +A ++F++M K N +P+ Y+ +I L L A +L EM EK
Sbjct: 217 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 276
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY + + K+ D M VP T +L+ C +++ ++
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 336
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
++ G CP + L+ G C G AF+
Sbjct: 337 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQ 368
>gi|15218855|ref|NP_171855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75180297|sp|Q9LR67.1|PPR9_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g03560, mitochondrial; Flags: Precursor
gi|9280662|gb|AAF86531.1|AC002560_24 F21B7.18 [Arabidopsis thaliana]
gi|332189465|gb|AEE27586.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 660
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++++ C + ++ E +VF ++ + + PN +L+ G+ +SG V H M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 389
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF+P VVTY++ ++G CK G +A+ F + ++LI G G +
Sbjct: 390 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 449
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTM 358
+A +LF+EM ++ D YNA+I + + R ++ A+ L MEE+ V TY +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 509
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G+ K E KL+D MI+ P L C++ +V + L G
Sbjct: 510 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
D++ T LC GR +EA + + + R R+V
Sbjct: 570 ILDAACEDMINT-LCKAGRIKEACKLADGITERGREV 605
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ F + G V + + +M G P++ TYN ++G A R+FE ME
Sbjct: 191 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T T+I G +A + +M R + D Y MI + D +
Sbjct: 251 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 310
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ L EM+EK I + + GL K L +++ MI P +L+
Sbjct: 311 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 370
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ + V+ + L +ID GF P ++V GLC GR EEA +
Sbjct: 371 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 418
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 157/426 (36%), Gaps = 81/426 (19%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSI 144
A FF ++ + +T + + + +LA + D+ + S +++ P +T+ + +
Sbjct: 135 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFP--MTVSAANA 192
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ K EE L + +M+ GI +N L+ + + A VF +
Sbjct: 193 LIKSFGKLGMVEELLWVWRKMKEN---GIEP-TLYTYNFLMNGLVSAMFVDSAERVFEVM 248
Query: 205 LS-RFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
S R P+ T N ++ G+ ++G AME +M RG +TY I
Sbjct: 249 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL-RDMETRGHEADKITYMTMIQACYADSD 307
Query: 263 FGDAMRLFEEME-----------------------------------RVACLPSLQTITT 287
FG + L++EM+ R P++ T
Sbjct: 308 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 367
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR-------------CR--- 331
LI G ++ A +L M KPD+ Y+ +++ L + CR
Sbjct: 368 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 427
Query: 332 -------------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++ A L +EM EK D+ Y+ + K ++
Sbjct: 428 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 487
Query: 373 KLYDRMIEGKFVPKT-RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L+ RM E + +T T +L+ R + L LW +ID+G P L TG
Sbjct: 488 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 547
Query: 432 LCSRGR 437
LC G+
Sbjct: 548 LCLSGK 553
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 96/258 (37%), Gaps = 36/258 (13%)
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
DV + E+ F +V N I + K G + + ++ +M+ P+L T
Sbjct: 167 DVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYN 226
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
L++G + A ++F+ M +KPDI YN MI + AME + +ME +
Sbjct: 227 FLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 286
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D +TY TM S LY M E
Sbjct: 287 GHEADKITYMTMIQACYADSDFGSCVALYQEMDE-------------------------- 320
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QR 465
+G HA L++ GLC G+ E + + M+ + + + A Y +L
Sbjct: 321 ---------KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 371
Query: 466 YLVQANANEKLEDLDRMI 483
Y + + + L RMI
Sbjct: 372 YAKSGSVEDAIRLLHRMI 389
>gi|357500061|ref|XP_003620319.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355495334|gb|AES76537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 496
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
+ +CK+G +A +F M + P++ T ++L+ G LV+ +++A+ +F+ M + +
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
PDI +YN +I+ + + +AAM L +EM ++I + VTY+++ GL KS + K
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L D M + P T L+ C N D + L L D+G P+ + +L+ GLC
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
GR E+A + +LV+ ++ +Y M+ + E L L +M +N
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEEN 458
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 132/268 (49%), Gaps = 1/268 (0%)
Query: 185 LQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+ FC + ++KEA++VF ++ + F PN T + L+ G+ +V + ++ M G
Sbjct: 226 VSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGV 285
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P + +YNI I+G+CK AM LFEEM +P++ T +LI G I A +
Sbjct: 286 NPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALK 345
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L DEM R PDI Y++++ +L + + A+ L+ +++++ + + TY + GL
Sbjct: 346 LVDEMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLC 405
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K E +++ ++ + T +++ FC N L + + + G P+
Sbjct: 406 KGGRPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAV 465
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++++ L + ++A + +M+ R
Sbjct: 466 TYEIIIRSLFDKDENDKAEKLLLEMITR 493
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/258 (25%), Positives = 125/258 (48%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F + G V + + M+ +GF+P+VVTY+ +DGYC A +F M + P
Sbjct: 229 FCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQGGVNPD 288
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+Q+ LI+G ++ A LF+EM R + P++ YN++I L + ++ A++L+D
Sbjct: 289 IQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYALKLVD 348
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM ++ D +TY ++ L K+ + L ++ + P T +L+ C
Sbjct: 349 EMHDRGQPPDIITYSSLLDALCKNHPGDKAIALLTKLKDQGLQPNMYTYTILINGLCKGG 408
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
R + N++ L+ +G+ + + +++ C+ G + EA +M + +Y
Sbjct: 409 RPEDAQNIFEDLLVKGYNINVNTYTVMIHVFCNNGMFGEALAMLSKMEENGCIPNAVTYE 468
Query: 462 MLQRYLVQANANEKLEDL 479
++ R L + N+K E L
Sbjct: 469 IIIRSLFDKDENDKAEKL 486
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/154 (20%), Positives = 64/154 (41%)
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
A +S+ + + A + M +K + VTY ++ G + +++ M +G
Sbjct: 224 APVSTFCKEGKVKEAKNVFAAMMKKGFKPNVVTYSSLMDGYCLVKEVNKAKSIFNNMAQG 283
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P ++ +L+ FC D +NL+ + R P+ + L+ GLC G+ A
Sbjct: 284 GVNPDIQSYNILINGFCKIKMTDAAMNLFEEMHCRKIIPNVVTYNSLIDGLCKSGKISYA 343
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ +M R + +Y L L + + +K
Sbjct: 344 LKLVDEMHDRGQPPDIITYSSLLDALCKNHPGDK 377
>gi|255660784|gb|ACU25561.1| pentatricopeptide repeat-containing protein [Verbena officinalis]
Length = 418
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 91/352 (25%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE K RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 130/308 (42%), Gaps = 9/308 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A SVF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASSVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNXLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
P + L+ GLC +G ++A + +M ++ + + +Y L + N K
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL------IDGNCKE 324
Query: 477 EDLDRMIK 484
DL+ K
Sbjct: 325 GDLETAFK 332
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNXLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AF+ K+M+ ++ + +Y L L Q +
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNXLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFKYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFKYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|410109955|gb|AFV61057.1| pentatricopeptide repeat-containing protein 11, partial [Phyla
nodiflora]
Length = 431
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 153/352 (43%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A++ ++ T +H P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIDCYRLTREHKFCVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------EGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+ +G P+ VT+ IDG+CK
Sbjct: 200 KSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T LI+G ++ QA L DEM LKPD
Sbjct: 260 NGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEMSMXGLKPDKIT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P TRT M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLKPDTRTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 126/263 (47%), Gaps = 4/263 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKEGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M + PD+ Y+ +I+ L + ++ A +L DEM EK + ++V
Sbjct: 189 RLGDLDEGFRLKSAMHASGVHPDVYTYSVLINGLCKESKMDDANKLFDEMLEKGLVPNSV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKNGWVDLAMEIYKQMLSQSLLPDLVTYNALIYGLCKKGDLKQAHDLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P L+ G C G + AFE K M+ ++ + +Y L L Q
Sbjct: 309 SMXGLKPDKITYTTLIDGCCKEGDLDTAFEHRKMMIQENIRLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPTR 495
+ D ++M++ + +V L P TR
Sbjct: 367 -RSVDAEKMLREMLSVGLKPDTR 388
>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
Length = 1393
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 3/264 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N ++ +C ++EA + + + F P+ T L+ G GDV A+E+F +E
Sbjct: 293 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF-NEA 351
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P +V YN + G C +G A+++ EM C P +QT +I+G + NI
Sbjct: 352 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 411
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A + ++ + PD+ +N +I + L++A++L++ M E I D +TY+++
Sbjct: 412 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 471
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ + V + + MI P T +L++ FC + +++ + + G
Sbjct: 472 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 531
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF 442
P + + L+ G C G E A+
Sbjct: 532 HPDAVSFNTLIYGFCRNGDLEGAY 555
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 18/392 (4%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LL+ LP ++ V V G AH + A + F L H H P AF K LH L
Sbjct: 142 LLRALPHRGAVAYCTV--VCG--LYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHAL 196
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ +A L+ V + S+ L + +I + + + E + D G+
Sbjct: 197 CKRGDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRLPEAVRLVD--------GM 247
Query: 174 RKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT 229
R + + +N L++ C + +EA +++++ P++ T N ++ G+ + V
Sbjct: 248 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 307
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ V +GF P VTY I+G C +G A+ LF E + P + +L+
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G L I A Q+ +EM + PDI YN +I+ L + +++ A +M++ K
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 427
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D T++T+ G K L+ +L +RM E P T T ++ C +V+
Sbjct: 428 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 487
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +I +G P+ ++L+ C + EEA
Sbjct: 488 FQEMILKGCHPNPITYNILIENFCRSNKMEEA 519
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C Q + A V ++ P+ +T NI++ G + G+++ + ++ +
Sbjct: 363 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 422
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G+ P V T+N IDGYCK+ A++L E M P T ++++G ++
Sbjct: 423 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 482
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + F EM + P+ YN +I + R + A +++ +M ++ + D V+++T+
Sbjct: 483 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 542
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G ++ LEG L+ ++ E + T L+ F + + ++ ++ +G
Sbjct: 543 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 602
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
+ +L+ G C + A+
Sbjct: 603 ADSYTYRVLIDGSCKTANVDRAY 625
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C + ++ A + ++ AP+ T N +L G ++G V + + EM+
Sbjct: 433 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 492
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G P+ +TYNI I+ +C+ +A ++ +M + P + TLI+G ++
Sbjct: 493 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 552
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF ++ ++ +N +I + +++ A ++ DEM K D+ TY +
Sbjct: 553 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 612
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K++ ++ MI+ F+P T ++ VN RV + + ++ G
Sbjct: 613 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 672
Query: 420 P 420
P
Sbjct: 673 P 673
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 2/303 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C + +++ A +F + ++ P+ N L+ G G + +EM G
Sbjct: 331 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 390
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P + TYNI I+G CK G DA + + LP + T TLI G + A
Sbjct: 391 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 450
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL + M + + PD YN++++ L + +N E EM K + +TY+ +
Sbjct: 451 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 510
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+S+ +E K+ +M + P + L+ FC N ++ L+ L ++G+
Sbjct: 511 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 570
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDR 481
+ L+ + A + +ML + + +YR+L AN + L
Sbjct: 571 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 630
Query: 482 MIK 484
MIK
Sbjct: 631 MIK 633
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 139/380 (36%), Gaps = 52/380 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P A+ + L Y DQA + + +L + + + +S+ L
Sbjct: 83 PAAPAYNAIMDALVDAAYHDQA-------HKVYVRMLAAGVSPDLHTHTIRLRSF--CLT 133
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
A + + + G+ + ++ +AR +F ++L + PN N +L
Sbjct: 134 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 193
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
+ GDV + +++ RG ++ TYNI I G C+ G +A+RL + M A
Sbjct: 194 HALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV- 252
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PD+ YN +I L + AM
Sbjct: 253 -----------------------------------PDVVTYNTLIRGLCKKSMPQEAMHY 277
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M + D+ TY+T+ G K S ++ +L + FVP T L+ C
Sbjct: 278 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 337
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
V+ L L+ +G P + LV GLC +G A + +M E
Sbjct: 338 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM------AEEGC 391
Query: 460 YRMLQRYLVQANANEKLEDL 479
+ +Q Y + N K+ ++
Sbjct: 392 HPDIQTYNIVINGLCKMGNI 411
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 8/278 (2%)
Query: 185 LQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
++A+ +++A F ++ L P N ++ ++ Y M+ G
Sbjct: 57 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 116
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL-IHGAGLVRNIHQAR 302
P + T+ IR+ +C A+RL + + + L HG + H AR
Sbjct: 117 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG-----HTHDAR 171
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QLFD+M ++ P++ A+N ++ +L + D+ A L+ ++ ++ + + TY+ GL
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ L +L D M VP T L++ C ++ ++++G P
Sbjct: 232 CEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ G C +EA E K + + + +Y
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 328
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ +T +I++ + EE + +M +E G+ + FN L+ FC
Sbjct: 497 HPNPITY---NILIENFCRSNKMEEASKVIVKMSQE---GLHP-DAVSFNTLIYGFCRNG 549
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+++ A +F KL + ++ T N L+ F ++ E + EM+ +G R TY
Sbjct: 550 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 609
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ IDG CK A EM + +PS+ T +I+ + + QA + M K
Sbjct: 610 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 669
Query: 312 NLKPDI 317
+ P++
Sbjct: 670 GVVPEV 675
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 12/245 (4%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I Y + G DA+ FE M+ AC P+ ++ QA +++ M
Sbjct: 53 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 112
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ PD+ + + S + A+ L+ + + V Y T+ GL
Sbjct: 113 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 168
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV-DLGLNLWGYLIDRGFCPHGHALDLL 428
+L+D+M+ P ++ C V + GL L G +I RG + ++
Sbjct: 169 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 227
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSE-ASYRMLQRYLVQAN-ANEKLEDLDRMIKNL 486
+ GLC GR EA M R V + +Y L R L + + E + L RM+
Sbjct: 228 IRGLCEAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-- 283
Query: 487 QAVLP 491
Q LP
Sbjct: 284 QGCLP 288
>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
Length = 1380
Score = 115 bits (287), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 129/264 (48%), Gaps = 3/264 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N ++ +C ++EA + + + F P+ T L+ G GDV A+E+F +E
Sbjct: 294 YNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELF-NEA 352
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P +V YN + G C +G A+++ EM C P +QT +I+G + NI
Sbjct: 353 QAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNI 412
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A + ++ + PD+ +N +I + L++A++L++ M E I D +TY+++
Sbjct: 413 SDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSV 472
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ + V + + MI P T +L++ FC + +++ + + G
Sbjct: 473 LNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGL 532
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF 442
P + + L+ G C G E A+
Sbjct: 533 HPDAVSFNTLIYGFCRNGDLEGAY 556
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 98/392 (25%), Positives = 172/392 (43%), Gaps = 18/392 (4%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LL+ LP ++ V V G AH + A + F L H H P AF K LH L
Sbjct: 143 LLRALPHRGAVAYCTV--VCG--LYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHAL 197
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ +A L+ V + S+ L + +I + + + E + D G+
Sbjct: 198 CKRGDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRLPEAVRLVD--------GM 248
Query: 174 RKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT 229
R + + +N L++ C + +EA +++++ P++ T N ++ G+ + V
Sbjct: 249 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 308
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ V +GF P VTY I+G C +G A+ LF E + P + +L+
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G L I A Q+ +EM + PDI YN +I+ L + +++ A +M++ K
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYL 428
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D T++T+ G K L+ +L +RM E P T T ++ C +V+
Sbjct: 429 PDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNET 488
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +I +G P+ ++L+ C + EEA
Sbjct: 489 FQEMILKGCHPNPITYNILIENFCRSNKMEEA 520
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C Q + A V ++ P+ +T NI++ G + G+++ + ++ +
Sbjct: 364 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 423
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G+ P V T+N IDGYCK+ A++L E M P T ++++G ++
Sbjct: 424 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 483
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + F EM + P+ YN +I + R + A +++ +M ++ + D V+++T+
Sbjct: 484 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 543
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G ++ LEG L+ ++ E + T L+ F + + ++ ++ +G
Sbjct: 544 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 603
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
+ +L+ G C + A+
Sbjct: 604 ADSYTYRVLIDGSCKTANVDRAY 626
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C + ++ A + ++ AP+ T N +L G ++G V + + EM+
Sbjct: 434 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 493
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G P+ +TYNI I+ +C+ +A ++ +M + P + TLI+G ++
Sbjct: 494 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 553
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF ++ ++ +N +I + +++ A ++ DEM K D+ TY +
Sbjct: 554 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 613
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K++ ++ MI+ F+P T ++ VN RV + + ++ G
Sbjct: 614 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 673
Query: 420 P 420
P
Sbjct: 674 P 674
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 2/303 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C + +++ A +F + ++ P+ N L+ G G + +EM G
Sbjct: 332 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 391
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P + TYNI I+G CK G DA + + LP + T TLI G + A
Sbjct: 392 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 451
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL + M + + PD YN++++ L + +N E EM K + +TY+ +
Sbjct: 452 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 511
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+S+ +E K+ +M + P + L+ FC N ++ L+ L ++G+
Sbjct: 512 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 571
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDR 481
+ L+ + A + +ML + + +YR+L AN + L
Sbjct: 572 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 631
Query: 482 MIK 484
MIK
Sbjct: 632 MIK 634
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 139/380 (36%), Gaps = 52/380 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P A+ + L Y DQA + + +L + + + +S+ L
Sbjct: 84 PAAPAYNAIMDALVDAAYHDQA-------HKVYVRMLAAGVSPDLHTHTIRLRSF--CLT 134
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
A + + + G+ + ++ +AR +F ++L + PN N +L
Sbjct: 135 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 194
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
+ GDV + +++ RG ++ TYNI I G C+ G +A+RL + M A
Sbjct: 195 HALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV- 253
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PD+ YN +I L + AM
Sbjct: 254 -----------------------------------PDVVTYNTLIRGLCKKSMPQEAMHY 278
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M + D+ TY+T+ G K S ++ +L + FVP T L+ C
Sbjct: 279 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 338
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
V+ L L+ +G P + LV GLC +G A + +M E
Sbjct: 339 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM------AEEGC 392
Query: 460 YRMLQRYLVQANANEKLEDL 479
+ +Q Y + N K+ ++
Sbjct: 393 HPDIQTYNIVINGLCKMGNI 412
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 8/278 (2%)
Query: 185 LQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
++A+ +++A F ++ L P N ++ ++ Y M+ G
Sbjct: 58 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 117
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL-IHGAGLVRNIHQAR 302
P + T+ IR+ +C A+RL + + + L HG + H AR
Sbjct: 118 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG-----HTHDAR 172
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QLFD+M ++ P++ A+N ++ +L + D+ A L+ ++ ++ + + TY+ GL
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ L +L D M VP T L++ C ++ ++++G P
Sbjct: 233 CEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ G C +EA E K + + + +Y
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 329
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ +T +I++ + EE + +M +E G+ + FN L+ FC
Sbjct: 498 HPNPITY---NILIENFCRSNKMEEASKVIVKMSQE---GLHP-DAVSFNTLIYGFCRNG 550
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+++ A +F KL + ++ T N L+ F ++ E + EM+ +G R TY
Sbjct: 551 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 610
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ IDG CK A EM + +PS+ T +I+ + + QA + M K
Sbjct: 611 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 670
Query: 312 NLKPDI 317
+ P++
Sbjct: 671 GVVPEV 676
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 12/245 (4%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I Y + G DA+ FE M+ AC P+ ++ QA +++ M
Sbjct: 54 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 113
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ PD+ + + S + A+ L+ + + V Y T+ GL
Sbjct: 114 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 169
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV-DLGLNLWGYLIDRGFCPHGHALDLL 428
+L+D+M+ P ++ C V + GL L G +I RG + ++
Sbjct: 170 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 228
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSE-ASYRMLQRYLVQAN-ANEKLEDLDRMIKNL 486
+ GLC GR EA M R V + +Y L R L + + E + L RM+
Sbjct: 229 IRGLCEAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-- 284
Query: 487 QAVLP 491
Q LP
Sbjct: 285 QGCLP 289
>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
Length = 814
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 158/367 (43%), Gaps = 19/367 (5%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
KA E F + P + L + + +A E+ +++ P + +M
Sbjct: 207 KAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTM 266
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF- 201
+ ++K +E L+ D M + V + +L+ + C ++ A +F
Sbjct: 267 ---IDGLAKAGHAQEALKVLDNMLAKACVPTEV----TYGILVNSLCKAGTLERAEELFR 319
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
V S F PN+ L+ GF +SG + + EMV G+RP V+T+ + IDG CK G
Sbjct: 320 VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSG 379
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
F A + FEEM R C P++ T TT+I G + + A ++ M PD Y
Sbjct: 380 NFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYI 439
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE- 380
++ + L+ A +L+DE+++ + Y ++ GL +E K D + E
Sbjct: 440 CLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVE---KTLDDLFEQ 496
Query: 381 GKFVPKT---RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC-SR- 435
K +T ++ C R+D ++ ++ G P ++L+ GLC SR
Sbjct: 497 SKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE 556
Query: 436 GRWEEAF 442
R E AF
Sbjct: 557 NRVERAF 563
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 102/381 (26%), Positives = 153/381 (40%), Gaps = 24/381 (6%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA---WE 124
+ E + +A H LKA P +F + AR R D A +E
Sbjct: 130 VAEKNYSQCYAIHEEMLKA-----------GIAPNTFSFNILIRSFARTRRADDAVTCFE 178
Query: 125 LMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNV 183
+M +R P L T I++ + K E+ E F M FV R +
Sbjct: 179 IMKR-KRCKPDLHTFL---ILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRT 234
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL+A K +KEAR VF ++ F P+ N ++ G ++G M+ +
Sbjct: 235 LLKA----KRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKA 290
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P+ VTY I ++ CK G A LF M P+ T+LIHG + +A
Sbjct: 291 CVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEAC 350
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LFDEM + +PD+ + MI L + + A + +EM + VTY T+ GL
Sbjct: 351 SLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGL 410
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K + ++ MI P + T + L+ FC R+D L L P+
Sbjct: 411 SKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNL 470
Query: 423 HALDLLVTGLCSRGRWEEAFE 443
LV GLC G E+ +
Sbjct: 471 QLYSSLVNGLCDGGSVEKTLD 491
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 183/482 (37%), Gaps = 80/482 (16%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
+A E F+ + F P + +H A+ +A L + P ++T
Sbjct: 313 RAEELFR-VMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVIT---H 368
Query: 143 SIMLSRISKFQSYEETLEAFDRMER-----------EIFVGIRKFG-------------- 177
++M+ + K ++E+ ++F+ M R I G+ K G
Sbjct: 369 TVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIA 428
Query: 178 ------SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV-- 228
S + LL FC + EA + +L +PN + + L+ G + G V
Sbjct: 429 HGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEK 488
Query: 229 TAMEMF----------------------------------YHEMVLRGFRPSVVTYNIRI 254
T ++F + MV G +P TYNI I
Sbjct: 489 TLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILI 548
Query: 255 DGYCK--KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+G C+ + A L ++E+V LP T T L G + + +A ++ +E R
Sbjct: 549 NGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRG 608
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
D+ AY A+ + L ++ A+ L EM + D Y + GL+K LE C
Sbjct: 609 WNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDAC 668
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-FCPHGHALDLLVTG 431
K +D MI P T L++ C VD + + ++ RG D L+ G
Sbjct: 669 KFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHG 728
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
C + + A + + M+ R + + L LV++ EK ++L ++ + A
Sbjct: 729 FCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQEL---LQEMAAGGS 785
Query: 492 PP 493
PP
Sbjct: 786 PP 787
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 164/400 (41%), Gaps = 19/400 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A K + H F P + L ++ D+A +L+ + + S L+ S +
Sbjct: 419 AFRIMKGMIAHGCF-PDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSP-NLQLYSSL 476
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN-----VLLQAFCTQKEMKEARSV 200
++ + S E+TL+ D E+ K +E + ++ C + EA +
Sbjct: 477 VNGLCDGGSVEKTLD--DLFEQS------KAAAETLDPGLCCSIIVGLCKTGRLDEACRI 528
Query: 201 FVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMF--YHEMVLRGFRPSVVTYNIRIDGY 257
F +++S P+ T NIL+ G S + F H++ G+ P VTY G
Sbjct: 529 FQRMVSEGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGL 588
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G A+++ EE + T L G + +A LF EM ++ PD
Sbjct: 589 CKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDA 648
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AY +I+ LI+ + L A + DEM K TY + L + ++ ++
Sbjct: 649 AAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFES 708
Query: 378 MIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M+ G+ V L+ FC +VD L L+ +I RG P L GL G
Sbjct: 709 MLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSG 768
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
+ E+A E ++M A++ + L +++ + KL
Sbjct: 769 KTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKL 808
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/307 (21%), Positives = 124/307 (40%), Gaps = 37/307 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +K + ++ ++L + APN + NIL+ F + + M
Sbjct: 122 YNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMK 181
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-TTLIHGAGLVRNI 298
+ +P + T+ I +D CK G A +F EM + +P + + T ++ + +
Sbjct: 182 RKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRV 241
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK------------ 346
+AR++F +M K PD AYN MI L + A++++D M K
Sbjct: 242 KEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGIL 301
Query: 347 -----RIGH------------------DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ G ++V Y ++ G KS ++ C L+D M+E +
Sbjct: 302 VNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGY 361
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P T +++ C + + + ++ G P+ ++ GL GR AF
Sbjct: 362 RPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFR 421
Query: 444 CSKQMLV 450
K M+
Sbjct: 422 IMKGMIA 428
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 103/269 (38%), Gaps = 43/269 (15%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTY-----------------------------------NIR 253
TA+ F GF+ V TY NI
Sbjct: 101 TAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNIL 160
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN- 312
I + + DA+ FE M+R C P L T L+ +A ++F EM
Sbjct: 161 IRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGF 220
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ PD + AM+ +L++ + + A E+ +ME+ D + Y+TM GL K+ +
Sbjct: 221 VPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEAL 280
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
K+ D M+ VP T +L+ C ++ L+ + GF P+ L+ G
Sbjct: 281 KVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGF 340
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYR 461
GR +EA +M+ EA YR
Sbjct: 341 AKSGRMKEACSLFDEMV-------EAGYR 362
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 88/189 (46%), Gaps = 1/189 (0%)
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+N Q + +EM K + P+ ++N +I S R R + A+ + M+ KR D T+
Sbjct: 133 KNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDAVTCFEIMKRKRCKPDLHTF 192
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV-VMLMKFFCVNFRVDLGLNLWGYLI 414
+ L K+ E +++ M+ FVP R + +++ RV ++G +
Sbjct: 193 LILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQME 252
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P A + ++ GL G +EA + ML + +E +Y +L L +A E
Sbjct: 253 KCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLE 312
Query: 475 KLEDLDRMI 483
+ E+L R++
Sbjct: 313 RAEELFRVM 321
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 82/177 (46%), Gaps = 9/177 (5%)
Query: 173 IRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDV 228
+R+ G+ + + ++ K++++A F +++ + P T L+ +G+V
Sbjct: 640 VRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNV 699
Query: 229 TAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ M+ RG SV+ Y+ I G+CK A++LFE+M +P+ T +
Sbjct: 700 DEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSAS 759
Query: 288 LIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
L GLVR+ +A++L EM P + A++ L + + ++L+ E
Sbjct: 760 LFD--GLVRSGKTEKAQELLQEMAAGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814
>gi|115448805|ref|NP_001048182.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|46805701|dbj|BAD17102.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|47497356|dbj|BAD19395.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537713|dbj|BAF10096.1| Os02g0759500 [Oryza sativa Japonica Group]
gi|125583759|gb|EAZ24690.1| hypothetical protein OsJ_08460 [Oryza sativa Japonica Group]
gi|215704115|dbj|BAG92955.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766866|dbj|BAG99094.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 555
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 104/432 (24%), Positives = 185/432 (42%), Gaps = 19/432 (4%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY----F 119
L++ LV +VL RL + A FF + + + + IL+ RY F
Sbjct: 110 LTTPLVADVLHRL---RYDEKLAFRFFVWASHQDGYEHEAATYNDVIDILSGTRYKARQF 166
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG-S 178
+++ H++R + + + +L + E+ L ++ ++ V +R +
Sbjct: 167 GVLCDVLDHMKRRRTRSVPVDDLLGILRAYT-----EKHLTHLRKLAKKRRVRMRTPPET 221
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ NVLL AFC ++EA VF ++ + N +T +IL G+ + D EM
Sbjct: 222 DALNVLLDAFCKCGMVREAEVVFSRVKRKLLGNAETYSILFFGWCRARDPKRAMKVLEEM 281
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL---PSLQTITTLIHGAGLV 295
+ P TYN ID +C G +A LFE M P+ +T + +I
Sbjct: 282 IQMKHTPENFTYNAAIDSFCSAGLVSEARDLFEFMRTEGSTISSPTAKTYSIMIAALAKA 341
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ + +L EM K PD+ Y +I ++ L+AA ++DEM + D VTY
Sbjct: 342 GQMEECFELISEMRKCGCMPDVSTYKDLIEGMLLVDKLDAAYCVLDEMAKAGFPPDIVTY 401
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ L + +L +RMIE P T MLM F D +N+W +
Sbjct: 402 NCFLKVLCGLQKADDALELCERMIEAHCEPSVHTYNMLMVMFFEMREPDRAINIWIEMDK 461
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
RG + ++ GL GR E+A +++ R ++ SY+ +++ +A
Sbjct: 462 RGCHRAVDTYETMIDGLFDSGRTEDATALLDEVINRGMKL---SYKKFDAIMLRLSAVGN 518
Query: 476 LEDLDRMIKNLQ 487
L + R+ ++++
Sbjct: 519 LGAIHRLSEHMR 530
>gi|110738150|dbj|BAF01006.1| hypothetical protein [Arabidopsis thaliana]
Length = 642
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++++ C + ++ E +VF ++ + + PN +L+ G+ +SG V H M+
Sbjct: 312 FSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMI 371
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF+P VVTY++ ++G CK G +A+ F + ++LI G G +
Sbjct: 372 DEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVD 431
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTM 358
+A +LF+EM ++ D YNA+I + + R ++ A+ L MEE+ V TY +
Sbjct: 432 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAIALFKRMEEEEGCDQTVYTYTIL 491
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G+ K E KL+D MI+ P L C++ +V + L G
Sbjct: 492 LSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTGLCLSGKVARACKILDELAPMGV 551
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
D++ T LC GR +EA + + + R R+V
Sbjct: 552 ILDAACEDMINT-LCKAGRIKEACKLADGITERGREV 587
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 96/228 (42%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ F + G V + + +M G P++ TYN ++G A R+FE ME
Sbjct: 173 NALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 232
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T T+I G +A + +M R + D Y MI + D +
Sbjct: 233 GRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETRGHEADKITYMTMIQACYADSDFGS 292
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ L EM+EK I + + GL K L +++ MI P +L+
Sbjct: 293 CVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLID 352
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ + V+ + L +ID GF P ++V GLC GR EEA +
Sbjct: 353 GYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALD 400
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/426 (20%), Positives = 157/426 (36%), Gaps = 81/426 (19%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR-THPSLLTLKSMSI 144
A FF ++ + +T + + + +LA + D+ + S +++ P +T+ + +
Sbjct: 117 AWSFFCWSRKQKKYTHNLECYVSLVDVLALAKDVDRIRFVSSEIKKFEFP--MTVSAANA 174
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ K EE L + +M+ GI +N L+ + + A VF +
Sbjct: 175 LIKSFGKLGMVEELLWVWRKMKEN---GIEP-TLYTYNFLMNGLVSAMFVDSAERVFEVM 230
Query: 205 LS-RFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
S R P+ T N ++ G+ ++G AME +M RG +TY I
Sbjct: 231 ESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKL-RDMETRGHEADKITYMTMIQACYADSD 289
Query: 263 FGDAMRLFEEME-----------------------------------RVACLPSLQTITT 287
FG + L++EM+ R P++ T
Sbjct: 290 FGSCVALYQEMDEKGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTV 349
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR-------------CR--- 331
LI G ++ A +L M KPD+ Y+ +++ L + CR
Sbjct: 350 LIDGYAKSGSVEDAIRLLHRMIDEGFKPDVVTYSVVVNGLCKNGRVEEALDYFHTCRFDG 409
Query: 332 -------------------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
++ A L +EM EK D+ Y+ + K ++
Sbjct: 410 LAINSMFYSSLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHRKVDEAI 469
Query: 373 KLYDRMIEGKFVPKT-RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L+ RM E + +T T +L+ R + L LW +ID+G P L TG
Sbjct: 470 ALFKRMEEEEGCDQTVYTYTILLSGMFKEHRNEEALKLWDMMIDKGITPTAACFRALSTG 529
Query: 432 LCSRGR 437
LC G+
Sbjct: 530 LCLSGK 535
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 96/258 (37%), Gaps = 36/258 (13%)
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
DV + E+ F +V N I + K G + + ++ +M+ P+L T
Sbjct: 149 DVDRIRFVSSEIKKFEFPMTVSAANALIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYN 208
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
L++G + A ++F+ M +KPDI YN MI + AME + +ME +
Sbjct: 209 FLMNGLVSAMFVDSAERVFEVMESGRIKPDIVTYNTMIKGYCKAGQTQKAMEKLRDMETR 268
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
D +TY TM S LY M E
Sbjct: 269 GHEADKITYMTMIQACYADSDFGSCVALYQEMDE-------------------------- 302
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QR 465
+G HA L++ GLC G+ E + + M+ + + + A Y +L
Sbjct: 303 ---------KGIQVPPHAFSLVIGGLCKEGKLNEGYTVFENMIRKGSKPNVAIYTVLIDG 353
Query: 466 YLVQANANEKLEDLDRMI 483
Y + + + L RMI
Sbjct: 354 YAKSGSVEDAIRLLHRMI 371
>gi|449519270|ref|XP_004166658.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g19440, chloroplastic-like [Cucumis sativus]
Length = 799
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 15/308 (4%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ C ++ EA + ++L R P ++ T N L+LGF G V EM
Sbjct: 469 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 528
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +P + TYN + G C G DA++L++E + + ++ T ++ G I
Sbjct: 529 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 588
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
LF+E+ + ++ + YN +I + + ++ AA++L++ M+ K I + TY ++
Sbjct: 589 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 648
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G+ +E L D M + FVP L+ +C ++D + W +I P
Sbjct: 649 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 708
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS----EASYRMLQRYLVQANANEKL 476
+ +++ G C G E+A +L++ ++ +Y +L +AN
Sbjct: 709 NKFTYTVMIDGYCKLGNMEKA----NNLLIKMKESGIVPDVVTYNVLTNGFCKAN----- 759
Query: 477 EDLDRMIK 484
D+D K
Sbjct: 760 -DMDNAFK 766
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 141/291 (48%), Gaps = 7/291 (2%)
Query: 178 SEEFNVLLQAFCTQ-KEMKEARSVFV-KLLSRFA--PNNKTMNILLLGFKESGDV-TAME 232
++ F++L+ + TQ + + + +V V LL+R P+ KT N L ++ + E
Sbjct: 148 TQAFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSLKTCNFXLSSLVKANEFEKCCE 207
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+F ++ G P V ++ I+ CK G +A+ LF +ME++ P++ T +I+G
Sbjct: 208 VF--RVMSEGACPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGL 265
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ A +L ++M + ++P++ Y A+I+ LI+ + ++DEM +
Sbjct: 266 CQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNV 325
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
V ++ + G K +EG K+ D MI P + T+ LM+ FC + +++ N
Sbjct: 326 VVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEE 385
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ G H +V LC + R+ AF +K ML R + S+ ML
Sbjct: 386 ILSSGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTML 436
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++++ +C +++ ++F +LLS+ N+ NI++ ++G+V A M
Sbjct: 573 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 632
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TY+ I G C G DA L +EM + +P++ T LI G + +
Sbjct: 633 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 692
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + EM N+ P+ Y MI + ++ A L+ +M+E I D VTY+ +
Sbjct: 693 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 752
Query: 360 FGLMKSSGLEGVCKLYDRM 378
G K++ ++ K+ D+M
Sbjct: 753 NGFCKANDMDNAFKVCDQM 771
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 149 ISKFQSYEETLEAFDRMER---------EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
IS +Y +E + + R E+ + S +N++++A C + A
Sbjct: 567 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 626
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ + S+ PN T + L+ G G V + EM GF P+VV Y I GYC
Sbjct: 627 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 686
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A + EM P+ T T +I G + N+ +A L +M + + PD+
Sbjct: 687 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 746
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
YN + + + D++ A ++ D+M + + D +TY T+ G
Sbjct: 747 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 789
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 153/399 (38%), Gaps = 82/399 (20%)
Query: 105 AFEKTLHILA---RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETL 159
AF+ +H+ + R F A ++ + R T PSL K+ + LS + K +E+
Sbjct: 150 AFDLLIHVYSTQFRNLGFSCAVDVFYLLARKGTFPSL---KTCNFXLSSLVKANEFEKCC 206
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILL 219
E F M + F + ++ A C +M+ A +F+K
Sbjct: 207 EVFRVMSEGACPDVFSFTN-----VINALCKGGKMENAIELFMK---------------- 245
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
ME G P+VVTYN I+G C+ G +A L E+M
Sbjct: 246 -----------MEKL-------GISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQ 287
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+L+T LI+G + + + DEM P++ +N +I + ++ A+++
Sbjct: 288 PNLKTYGALINGLIKLNFFDKVNHILDEMIGAGFNPNVVVFNNLIDGYCKMGNIEGALKI 347
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLE--------------------------GVCK 373
D M K I +VT +++ G KS +E +CK
Sbjct: 348 KDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCK 407
Query: 374 LY---------DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ M+ F P + ML+ C + + LW L+++G
Sbjct: 408 KFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVT 467
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ GLC G+ EA K+ML R + +Y L
Sbjct: 468 SNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNAL 506
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 89/417 (21%), Positives = 163/417 (39%), Gaps = 46/417 (11%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSM 142
A+E F ++ +P + ++ L + D A+EL V+ P+L K+
Sbjct: 238 NAIELF-MKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNL---KTY 293
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+++ + K +++ D M I G FN L+ +C ++ A +
Sbjct: 294 GALINGLIKLNFFDKVNHILDEM---IGAGFNP-NVVVFNNLIDGYCKMGNIEGALKIKD 349
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDV----TAMEMF----------------------- 234
++S+ P + T+ L+ GF +S + A+E
Sbjct: 350 VMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKKF 409
Query: 235 -YHE-------MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
YH M+ R FRPS + + + G CK G +A L+ + S T
Sbjct: 410 RYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLEATELWFRLLEKGSPASKVTSN 469
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
LIHG + +A ++ EM +R L D YNA+I + L +EM ++
Sbjct: 470 ALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTKR 529
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
I D TY+ + GL L+ KL+D + T ++M+ +C R++
Sbjct: 530 GIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIEDV 589
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
NL+ L+ + + ++++ C G A + + M + + A+Y L
Sbjct: 590 ENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSL 646
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 37/257 (14%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F+ G A+++FY + +G PS+ T N + K F +F M AC P
Sbjct: 162 FRNLGFSCAVDVFYL-LARKGTFPSLKTCNFXLSSLVKANEFEKCCEVFRVMSEGAC-PD 219
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ + T +I+ + A +LF +M K + P++ YN +I+ L + L+ A EL +
Sbjct: 220 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 279
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M K + + TY + GL+K + + V + D MI
Sbjct: 280 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILDEMIGA-------------------- 319
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
GF P+ + L+ G C G E A + M+ + + +
Sbjct: 320 ---------------GFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 364
Query: 462 MLQRYLVQANANEKLED 478
L + +++ E E+
Sbjct: 365 SLMQGFCKSDQIEHAEN 381
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 61/123 (49%), Gaps = 2/123 (1%)
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+K++ E C+++ M EG P + ++ C +++ + L+ + G P+
Sbjct: 196 LVKANEFEKCCEVFRVMSEGA-CPDVFSFTNVINALCKGGKMENAIELFMKMEKLGISPN 254
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED-LD 480
+ ++ GLC GR + AFE ++M V+ Q + +Y L L++ N +K+ LD
Sbjct: 255 VVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFFDKVNHILD 314
Query: 481 RMI 483
MI
Sbjct: 315 EMI 317
>gi|449462543|ref|XP_004149000.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic-like [Cucumis sativus]
Length = 822
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 15/308 (4%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ C ++ EA + ++L R P ++ T N L+LGF G V EM
Sbjct: 492 NALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALILGFCNEGKVEGCFRLREEMTK 551
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +P + TYN + G C G DA++L++E + + ++ T ++ G I
Sbjct: 552 RGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLISNIHTYGIMMEGYCKANRIED 611
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
LF+E+ + ++ + YN +I + + ++ AA++L++ M+ K I + TY ++
Sbjct: 612 VENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMKSKGILPNCATYSSLIH 671
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G+ +E L D M + FVP L+ +C ++D + W +I P
Sbjct: 672 GVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMDTAESTWLEMISFNIHP 731
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS----EASYRMLQRYLVQANANEKL 476
+ +++ G C G E+A +L++ ++ +Y +L +AN
Sbjct: 732 NKFTYTVMIDGYCKLGNMEKA----NNLLIKMKESGIVPDVVTYNVLTNGFCKAN----- 782
Query: 477 EDLDRMIK 484
D+D K
Sbjct: 783 -DMDNAFK 789
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/388 (23%), Positives = 173/388 (44%), Gaps = 20/388 (5%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLK 140
+N + L FF F F T ++ + +L R ++ A L+ + + +L L
Sbjct: 87 ANPMTCLNFFYFASNSFKFRFTIHSYCTLILLLIRSKFIPPARLLLIRLIDGNLPVLNLD 146
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ-KEMKEARS 199
S + + + F+ ++ F++L+ + TQ + + + +
Sbjct: 147 SEKFHIEIANALFGLTSVVGRFEW-------------TQAFDLLIHVYSTQFRNLGFSCA 193
Query: 200 VFV-KLLSRFA--PNNKTMNILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRID 255
V V LL+R P+ KT N LL ++ + E+F ++ G P V ++ I+
Sbjct: 194 VDVFYLLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVF--RVMSEGACPDVFSFTNVIN 251
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
CK G +A+ LF +ME++ P++ T +I+G + A +L ++M + ++P
Sbjct: 252 ALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQP 311
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ Y A+I+ LI+ + ++DEM + V ++ + G K +EG K+
Sbjct: 312 NLKTYGALINGLIKLNFFDKVNHVLDEMIGSGFNPNVVVFNNLIDGYCKMGNIEGALKIK 371
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
D MI P + T+ LM+ FC + +++ N ++ G H +V LC +
Sbjct: 372 DVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILSSGLSIHPDNCYSVVHWLCKK 431
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRML 463
R+ AF +K ML R + S+ ML
Sbjct: 432 FRYHSAFRFTKMMLSRNFRPSDLLLTML 459
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 98/199 (49%), Gaps = 1/199 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++++ +C +++ ++F +LLS+ N+ NI++ ++G+V A M
Sbjct: 596 YGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLLENMK 655
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ TY+ I G C G DA L +EM + +P++ T LI G + +
Sbjct: 656 SKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYCKLGQMD 715
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + EM N+ P+ Y MI + ++ A L+ +M+E I D VTY+ +
Sbjct: 716 TAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVVTYNVLT 775
Query: 360 FGLMKSSGLEGVCKLYDRM 378
G K++ ++ K+ D+M
Sbjct: 776 NGFCKANDMDNAFKVCDQM 794
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 99/223 (44%), Gaps = 10/223 (4%)
Query: 149 ISKFQSYEETLEAFDRMER---------EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
IS +Y +E + + R E+ + S +N++++A C + A
Sbjct: 590 ISNIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQ 649
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ + S+ PN T + L+ G G V + EM GF P+VV Y I GYC
Sbjct: 650 LLENMKSKGILPNCATYSSLIHGVCNIGLVEDAKHLIDEMRKEGFVPNVVCYTALIGGYC 709
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A + EM P+ T T +I G + N+ +A L +M + + PD+
Sbjct: 710 KLGQMDTAESTWLEMISFNIHPNKFTYTVMIDGYCKLGNMEKANNLLIKMKESGIVPDVV 769
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
YN + + + D++ A ++ D+M + + D +TY T+ G
Sbjct: 770 TYNVLTNGFCKANDMDNAFKVCDQMATEGLPVDEITYTTLVHG 812
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/498 (20%), Positives = 191/498 (38%), Gaps = 69/498 (13%)
Query: 7 LKRSDKFPGISDRLALLFSTTTQSSEIER---ITRIINDHPFPDQPLHPTLLQHLPQTTP 63
L R FP + L S+ +++E E+ + R++++ PD
Sbjct: 200 LARKGTFPSLK-TCNFLLSSLVKANEFEKCCEVFRVMSEGACPDV--------------- 243
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
S T V N L + + A+E F ++ +P + ++ L + D A+
Sbjct: 244 FSFTNVINALCKGGKMEN----AIELF-MKMEKLGISPNVVTYNCIINGLCQNGRLDNAF 298
Query: 124 ELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
EL V+ P+L K+ +++ + K +++ D M F F
Sbjct: 299 ELKEKMTVKGVQPNL---KTYGALINGLIKLNFFDKVNHVLDEMIGSGF----NPNVVVF 351
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV----TAMEMF-- 234
N L+ +C ++ A + ++S+ P + T+ L+ GF +S + A+E
Sbjct: 352 NNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLYSLMQGFCKSDQIEHAENALEEILS 411
Query: 235 ----------------------YHE-------MVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
YH M+ R FRPS + + + G CK G +
Sbjct: 412 SGLSIHPDNCYSVVHWLCKKFRYHSAFRFTKMMLSRNFRPSDLLLTMLVCGLCKDGKHLE 471
Query: 266 AMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMIS 325
A L+ + S T LIHG + +A ++ EM +R L D YNA+I
Sbjct: 472 ATELWFRLLEKGSPASKVTSNALIHGLCGAGKLPEASRIVKEMLERGLPMDRITYNALIL 531
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ L +EM ++ I D TY+ + GL L+ KL+D +
Sbjct: 532 GFCNEGKVEGCFRLREEMTKRGIQPDIYTYNFLLRGLCNVGKLDDAIKLWDEFKASGLIS 591
Query: 386 KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECS 445
T ++M+ +C R++ NL+ L+ + + ++++ C G A +
Sbjct: 592 NIHTYGIMMEGYCKANRIEDVENLFNELLSKKMELNSIVYNIIIKAHCQNGNVAAALQLL 651
Query: 446 KQMLVRRRQVSEASYRML 463
+ M + + A+Y L
Sbjct: 652 ENMKSKGILPNCATYSSL 669
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/257 (22%), Positives = 102/257 (39%), Gaps = 37/257 (14%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F+ G A+++FY + +G PS+ T N + K F +F M AC P
Sbjct: 185 FRNLGFSCAVDVFY-LLARKGTFPSLKTCNFLLSSLVKANEFEKCCEVFRVMSEGAC-PD 242
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ + T +I+ + A +LF +M K + P++ YN +I+ L + L+ A EL +
Sbjct: 243 VFSFTNVINALCKGGKMENAIELFMKMEKLGISPNVVTYNCIINGLCQNGRLDNAFELKE 302
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+M K + + TY + GL+K + + V + D MI
Sbjct: 303 KMTVKGVQPNLKTYGALINGLIKLNFFDKVNHVLDEMI---------------------- 340
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
GF P+ + L+ G C G E A + M+ + + +
Sbjct: 341 -------------GSGFNPNVVVFNNLIDGYCKMGNIEGALKIKDVMISKNITPTSVTLY 387
Query: 462 MLQRYLVQANANEKLED 478
L + +++ E E+
Sbjct: 388 SLMQGFCKSDQIEHAEN 404
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 64/131 (48%), Gaps = 2/131 (1%)
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T + + L+K++ E C+++ M EG P + ++ C +++ + L+ +
Sbjct: 211 TCNFLLSSLVKANEFEKCCEVFRVMSEGA-CPDVFSFTNVINALCKGGKMENAIELFMKM 269
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P+ + ++ GLC GR + AFE ++M V+ Q + +Y L L++ N
Sbjct: 270 EKLGISPNVVTYNCIINGLCQNGRLDNAFELKEKMTVKGVQPNLKTYGALINGLIKLNFF 329
Query: 474 EKLED-LDRMI 483
+K+ LD MI
Sbjct: 330 DKVNHVLDEMI 340
>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
chloroplastic-like [Vitis vinifera]
Length = 582
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 139/300 (46%), Gaps = 1/300 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L++ F K +++A V L S P+ N ++ GF + + A + M RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P +VTYNI I C + G A+++ +++ C+P++ T T LI + I++A +
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L +EM R L PD+ YNA+I + + + A EL+ + K D ++Y+ + +
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFL 288
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ KL M P T +L+ C R+D +++ +I++ P +
Sbjct: 289 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 348
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRM 482
+ D L++ LC GR + A M+ +Y + L + NAN+ LE +++
Sbjct: 349 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 408
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL+AF Q + E + ++ SR PN T +IL+ G + M+
Sbjct: 280 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 339
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +Y+ I CK+G A+ + + M CLP + T++ N +
Sbjct: 340 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 399
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA ++F+++ P++ +YN MIS+L C D + A+ ++ M K + D +TY+++
Sbjct: 400 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLI 459
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L D M + F P + +++ C R+D + ++ +I++G
Sbjct: 460 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 519
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ LL+ G+ G EA E + L R +S+ S++ L +
Sbjct: 520 PNETTYILLIEGIGFAGWRTEAMELANS-LFSRDVISQDSFKRLNK 564
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 103/218 (47%), Gaps = 2/218 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G F +++ E + P + T LI G +NI +A ++ E+ + + +PD+
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+IS + + AA ++++ M+ + D VTY+ M L L K+ D+
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ +P T +L++ V ++ + L ++ RG P + + ++ G+C G
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANE 474
E A E + + + SY +L R +L Q +E
Sbjct: 258 VERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDE 295
>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 777
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 140/300 (46%), Gaps = 3/300 (1%)
Query: 182 NVLLQAFCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMV 239
N LL + E+K + VF + P+ + ++ F G V A+E+F +M
Sbjct: 166 NFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELF-RKME 224
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+VVTYN I G CK G +A + E+ME+ PSL T LI+G +
Sbjct: 225 KVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFD 284
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM R P+ YN +I R +++ A+++ D+M I ++VT +++
Sbjct: 285 EANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLI 344
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G KS+ +E L + M+ G V T ++ C+ R D L ++ R F
Sbjct: 345 QGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFK 404
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ L LLV+GLC G+ EA E ++L + + + L L +A + E+ L
Sbjct: 405 PNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKL 464
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 70/287 (24%), Positives = 121/287 (42%), Gaps = 1/287 (0%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH 236
S +N L+ A C + +++E + +++ R P+ T N+LL G G + +H
Sbjct: 477 SISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWH 536
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
E G P TY I IDGYCK + +LF+EM + + TLI
Sbjct: 537 ECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENG 596
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
N+ +A +L D+M R + Y+++I L +++A +L+DEM ++ + + V Y
Sbjct: 597 NMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYT 656
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G K + V + M P T +++ C + L + +
Sbjct: 657 ALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQK 716
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P + L G C G+ EEA + M + + +Y L
Sbjct: 717 GIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTL 763
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 123/283 (43%), Gaps = 8/283 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
K E FK + PD + LH L M ++A L H + + + +
Sbjct: 492 KVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLW-HECKKNGNFPDAYTY 550
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
IM+ K EE + F M + + I + + + L++A+C M+EA +
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEM---VTMKIEQ-NAVVYGTLIRAYCENGNMREAFRLRD 606
Query: 203 KLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ SR P + T + L+ G G V + EM G P+VV Y I GYCK G
Sbjct: 607 DMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLG 666
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+ +EM P+ T T +I+G + N+ A +L +EM ++ + PD YN
Sbjct: 667 QMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYN 726
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
A+ + + + A+++ D M I D++TY T+ G K
Sbjct: 727 ALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGWHK 769
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/418 (20%), Positives = 162/418 (38%), Gaps = 50/418 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMS 143
A+E F+ ++ P + +H L + D+A++ ++ R PSL+T
Sbjct: 216 AIELFR-KMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTY---G 271
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVF 201
++++ + K + ++E M R + +N L+ +C + A +
Sbjct: 272 VLINGLVKLERFDEANCILKEMSD------RGYAPNNVVYNTLIDGYCRIGNISTALQIR 325
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAME---------------------------- 232
++S +PN+ T N L+ G+ +S + E
Sbjct: 326 DDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLK 385
Query: 233 -------MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
+F EM+LR F+P+ + + G C+ G +A+ L+ + + T
Sbjct: 386 CRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTS 445
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
LIHG + +A +L EM +R L D +YN +I + + + +L +EM
Sbjct: 446 NALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVR 505
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ I D TY+ + GL +E L+ + P T +++ +C RV+
Sbjct: 506 RGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEE 565
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G L+ ++ + L+ C G EAF M R + A+Y L
Sbjct: 566 GEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSL 623
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 135/304 (44%), Gaps = 7/304 (2%)
Query: 150 SKFQSYEET--LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
S Q Y ++ +E + + E+ G F ++ C + A +++L R
Sbjct: 342 SLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLR 401
Query: 208 -FAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
F PN+ + +L+ G ++G + A+E++Y ++ +GF + VT N I G C+ G +
Sbjct: 402 NFKPNDGLLTLLVSGLCQNGKQSEAIELWY-RLLEKGFAANTVTSNALIHGLCEAGSKEE 460
Query: 266 AMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A +L +EM ER L S+ + TLI + + +L +EM +R ++PD+ YN ++
Sbjct: 461 AAKLLKEMLERGLVLDSI-SYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLL 519
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + A L E ++ D TY M G K++ +E KL+ M+ K
Sbjct: 520 HGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIE 579
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
L++ +C N + L + RG L+ GL + G + A +
Sbjct: 580 QNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQL 639
Query: 445 SKQM 448
+M
Sbjct: 640 LDEM 643
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/239 (21%), Positives = 102/239 (42%), Gaps = 1/239 (0%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
FK G E+F + +G PS+ T N + K + ++F+ M P
Sbjct: 138 FKHLGFGVVFELF-SLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPD 196
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ +T+++ + A +LF +M K + P++ YN +I L + L+ A + +
Sbjct: 197 VYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKE 256
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+ME++R+ VTY + GL+K + + M + + P L+ +C
Sbjct: 257 KMEKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIG 316
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ L + +I G P+ + L+ G C + E A ++ML +++ ++
Sbjct: 317 NISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTF 375
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 65/134 (48%), Gaps = 3/134 (2%)
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T + + L+K++ ++ +++D M P ++ FC RVD + L+ +
Sbjct: 164 TCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKM 223
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P+ + ++ GLC GR +EAF+ ++M R + S +Y +L LV+
Sbjct: 224 EKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKL--- 280
Query: 474 EKLEDLDRMIKNLQ 487
E+ ++ + ++K +
Sbjct: 281 ERFDEANCILKEMS 294
>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
Length = 698
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 169/402 (42%), Gaps = 49/402 (12%)
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ ++ LA+ + +A LM + + T+ + + +L+ + K EE ++ +
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKIT-ANGCTPTIATYNALLNGLCKMGRLEEAID----L 316
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKE 224
R+I + L+ +K EA +F ++ SR A + L+ G +
Sbjct: 317 LRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQ 376
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
+G + Y M G P VVT + IDG K G G A+R+F+ ME P+
Sbjct: 377 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 436
Query: 285 ITTLIHG---------------------------------AGLVR--NIHQARQLFDEMP 309
+ LIHG GL + ++ AR FDEM
Sbjct: 437 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEML 496
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ KPD+ YN +IS L + + +AA ++D+M R Y ++ GL KS LE
Sbjct: 497 EAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLVDGLCKSGKLE 551
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
G C L+ M E V ++T L+ C RVD ++L+ + G PH +A + ++
Sbjct: 552 GGCMLFHEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 609
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ L G+ E + Q + R + +Y L ++ AN
Sbjct: 610 SALIKSGKVNEG-QAVYQEMTRWWKPDRVTYNALLNGMIGAN 650
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 157/366 (42%), Gaps = 6/366 (1%)
Query: 107 EKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
+ + I ++ D AWEL + + P S+ + + F + EA + ++
Sbjct: 86 DAVVKIFQCLKDADLAWELFQCL--SSPRFGFQHSVHTGNALLDVFARTKRHREAGNLLK 143
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKE 224
E+ I + E +NVL+ +C +E +EA +V ++ F AP+ KT N++L G +
Sbjct: 144 NELAT-IFRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCK 202
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG V A M + E V R S T++I I+G K G A L +E C + T
Sbjct: 203 SGKVLA-AMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHT 261
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T +++ + I +A L +++ P I YNA+++ L + L A++L+ ++
Sbjct: 262 YTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIV 321
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+ D VTY ++ GL K KL+ M T L++ ++
Sbjct: 322 DNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIP 381
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+++ + G P L ++ GL GR A K M R +E Y L
Sbjct: 382 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 441
Query: 465 RYLVQA 470
L +A
Sbjct: 442 HGLCKA 447
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 160/391 (40%), Gaps = 17/391 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + + + R ++A+ ++ ++ +LK+ +++L + K
Sbjct: 150 FRPDVETWNVLITGYCLAREPEEAFAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAA 209
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI- 217
++ F+ + R + V + F++L+ M +A S L N T++I
Sbjct: 210 MDHFEAVRRSMPVS-----AATFSILINGLVKAGMMIQAHS----LAQETTTNGCTIDIH 260
Query: 218 ----LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
++ ++ + ++ G P++ TYN ++G CK G +A+ L ++
Sbjct: 261 TYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKI 320
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P + T T+LI G G + +A +LF EM R L D Y A+I L++ +
Sbjct: 321 VDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKI 380
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A + M D VT TM GL K+ + +++ M P L
Sbjct: 381 PQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSAL 440
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ C ++D L + + + FC P ++L+ GLC G E A +ML
Sbjct: 441 IHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAG 499
Query: 453 RQVSEASYRMLQRYLVQA-NANEKLEDLDRM 482
+ +Y +L L +A N + LD M
Sbjct: 500 CKPDVYTYNILISGLCKAGNTDAACGVLDDM 530
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 121/287 (42%), Gaps = 42/287 (14%)
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFC 189
+H + + ++S M+ +SK + F ME R E ++ L+ C
Sbjct: 392 SHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME------ARGLAPNEVVYSALIHGLC 445
Query: 190 TQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++M A + ++ F P+ T NIL+ G +SGDV A F+ EM+ G +P V
Sbjct: 446 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 505
Query: 249 TYNIRI------------------------------DGYCKKGCFGDAMRLFEEMERVAC 278
TYNI I DG CK G LF EMER
Sbjct: 506 TYNILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGV 565
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
S QT T LI + +A LF+ + K + P AYN++IS+LI+ +N
Sbjct: 566 ANS-QTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSIISALIKSGKVNEGQA 623
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
+ EM + D VTY+ + G++ ++ ++ Y M +VP
Sbjct: 624 VYQEMT-RWWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVP 669
>gi|414882131|tpg|DAA59262.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
Length = 1604
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 66/202 (32%), Positives = 111/202 (54%), Gaps = 1/202 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++ A+ F ++ + P+ T N LL G+ ++G++ + + ++
Sbjct: 1228 YNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+V+TYNI IDGYC+ G +A L EEM CLP++ T T L+ G+ VR++
Sbjct: 1288 RAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLA 1347
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR+ FDEM + L+PD AYN I + + D+ A EL + + + I D VTY+ +
Sbjct: 1348 MAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILI 1407
Query: 360 FGLMKSSGLEGVCKLYDRMIEG 381
GL K+ L+ +L +M+ G
Sbjct: 1408 HGLCKTGNLKDAKELQMKMVRG 1429
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 4/246 (1%)
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
S F ++ S AP+ K N +L +++ + + EM+ G PS+VTYN +D +
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129
Query: 258 CKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
K+G L +EME CLP+ T +I G ++ +A +L + M + + K
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGM-RLSKKA 1188
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
YN +I+ L+ + +L EME + I VTY+ M GL++S +E +
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M +P T L+ +C + L L+G L G P ++L+ G C
Sbjct: 1249 AEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRL 1308
Query: 436 GRWEEA 441
G EEA
Sbjct: 1309 GDLEEA 1314
>gi|410109953|gb|AFV61056.1| pentatricopeptide repeat-containing protein 11, partial [Nashia
inaguensis]
Length = 431
Score = 114 bits (286), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 97/380 (25%), Positives = 157/380 (41%), Gaps = 44/380 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H + P D K L L ++RYF W
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLRYFKLVWGF-------------------- 129
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE LE ++ FN+L+ FC +++ A+SVF +
Sbjct: 130 ---------YEEILEC--GYPASLYF---------FNILMHRFCKDGDIRVAQSVF-DAI 168
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ GD+ M+ G +P V TY++ I+G CK+
Sbjct: 169 TKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKM 228
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ M ++L PD+ YN +
Sbjct: 229 DDANELFDEMLVKGLIPNGVTFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTL 288
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A L+DEM K + D TY T+ G K L+ K RMI+G
Sbjct: 289 IYGLCKKGDLKQAHXLIDEMSMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNI 348
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
L+ C R + ++ G P +++ C +G + +
Sbjct: 349 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDIGTYTMIINEFCKKGDVWKGSK 408
Query: 444 CSKQMLVRRRQVSEASYRML 463
K+M S +Y +L
Sbjct: 409 LLKEMQRNGHVPSVVTYNVL 428
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLVKGLIPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y M+ +P T L+ C + L +
Sbjct: 249 TFTTLIXGHCKNGRVDLAMEIYKXMLSQSLLPDLITYNTLIYGLCKKGDLKQAHXLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AF+ K+M+ ++ + +Y L L Q +
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDTAFKHRKRMIQGNIRLDDVAYTALISGLCQEGRS 368
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 369 ---VDAEKMLREMLSVGLKP 385
>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
Length = 552
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 186/443 (41%), Gaps = 51/443 (11%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM--SHVQRTHPSLLTLKSM 142
KA+ FK + + P + + L + R +A++L + + HP+++T +M
Sbjct: 13 KAITLFKQMVDKAIY-PDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTM 71
Query: 143 SIMLSRISKFQSYEETLEAFDRM----------------------EREIFVGIRKF---- 176
+ + K E L +D M + E+ G +
Sbjct: 72 ---IDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMA 128
Query: 177 ------GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVT 229
+ +N L+ A Q KEA S+ ++ + P T +++ G + G++
Sbjct: 129 GRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIE 188
Query: 230 AM-----EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
A EMF M+ G P V+T+N +DG CK+ DA +F+ C P++ T
Sbjct: 189 AAFRVVDEMF---MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVT 245
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+TLI G + + +A QL +M + + + Y+ ++ L++ + A+ ++ +M
Sbjct: 246 YSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMR 305
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+ D VTY+T+ G K L L M+E F P T L C + R D
Sbjct: 306 DAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFD 365
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE--ASYRM 462
+ + Y+ RG P+ +V GLC GR EA ++M R V+ +Y
Sbjct: 366 EAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKM-ARDEVVAPHVIAYSA 424
Query: 463 LQRYLVQANA-NEKLEDLDRMIK 484
L L +A +E E L+RMI+
Sbjct: 425 LIDGLCKAGKIDEAYEFLERMIR 447
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/331 (25%), Positives = 140/331 (42%), Gaps = 37/331 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN +L C ++ + +A +VF + L R PN T + L+ G + + +MV
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G R + VTY+ +DG K G DA+ + +M CLP T TLI G + +
Sbjct: 271 ELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLR 330
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM + P + Y + L R + A+E++D M + + +TY ++
Sbjct: 331 EAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIV 390
Query: 360 FGLMK---------------------------SSGLEGVCK---------LYDRMIEGKF 383
GL K S+ ++G+CK +RMI
Sbjct: 391 DGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGR 450
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T +L+ C R+D GL L+ + +RG P LV LC R +EAF+
Sbjct: 451 IPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFD 510
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+QM ++ R + L++ N +E
Sbjct: 511 LFQQMRSDGLSPDRSTRRTMIHGLLEVNRDE 541
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 148/345 (42%), Gaps = 14/345 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F D K IL F +A E + P+++T ++ LS+++K
Sbjct: 211 FNSVLDGLCKEQRILDAHNVFKRALE-----RGCRPNVVTYSTLIDGLSKMAKMD----- 260
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
EA + + + +G R + ++ ++ M++A V ++ P+ T N
Sbjct: 261 -EALQLLAKMVELGCRA-NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNT 318
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF + + EM+ GF PSVVTY G C+ G F +A+ + + M
Sbjct: 319 LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 378
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL-KPDIGAYNAMISSLIRCRDLNAA 336
C P+ T ++++ G + +A F++M + + P + AY+A+I L + ++ A
Sbjct: 379 CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEA 438
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
E ++ M D VT+ + GL + ++ +L+ M E VP T L+
Sbjct: 439 YEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDR 498
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C RVD +L+ + G P ++ GL R E+A
Sbjct: 499 LCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRDEDA 543
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/270 (24%), Positives = 125/270 (46%), Gaps = 4/270 (1%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
++ C +++ +A ++F +++ + P+ T L+ G + V + E +G
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQA 301
P+VVTYN IDG CK G +A+ L+++M P++ T +TLI G + +
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+L +EM R P+ YN ++++L+ A L+++M + +T+ + G
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 362 LMKSSGLEGVCKLYDR--MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K +E ++ D MIE P T ++ C R+ N++ ++RG
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P+ L+ GL + +EA + +M+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMV 270
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 123/271 (45%), Gaps = 4/271 (1%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G +S V + +MV + P VVTY IDG K+ +A LFEE
Sbjct: 1 MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAA 336
C P++ T T+I G I A L+D+M +P + Y+ +I L R +++
Sbjct: 61 CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+L++EM + + VTY+T+ L+ + L ++M P+ T +++K
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180
Query: 397 FCVNFRVDLGLNLWG--YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ + ++I+ G P + ++ GLC R +A K+ L R +
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240
Query: 455 VSEASYRMLQRYLVQ-ANANEKLEDLDRMIK 484
+ +Y L L + A +E L+ L +M++
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 271
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 87/212 (41%), Gaps = 9/212 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HPS++T ++ L R +F +E +E D M + ++ ++ C
Sbjct: 345 HPSVVTYTTLCHGLCRSGRF---DEAVEILDYMAARGCAP----NAITYSSIVDGLCKAG 397
Query: 193 EMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ EA F K+ AP+ + L+ G ++G + F M+ G P VVT+
Sbjct: 398 RVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTF 457
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
+I I+G C G + LF M C+P + T TL+ + +A LF +M
Sbjct: 458 SILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRS 517
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
L PD MI L+ A + DE
Sbjct: 518 DGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549
>gi|302792409|ref|XP_002977970.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
gi|300153991|gb|EFJ20627.1| hypothetical protein SELMODRAFT_108199 [Selaginella moellendorffii]
Length = 695
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 148/334 (44%), Gaps = 39/334 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ C + EA S ++ APN + NI++ G+ ++ ++ F EM
Sbjct: 13 YNNLISCLCKAGMLAEAESYLKRMPQHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEE 72
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+ Y+ + +CK G AM +F EM C P + L+ G R IH+
Sbjct: 73 LGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHE 132
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+LF M R KPD+ YN MI+ L + + L+ A+ L++ M+++ + VTY T+
Sbjct: 133 ARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLID 192
Query: 361 GLMKSSGLEGVCKLYDRMIE--------------------GKFVPKTRTVV-MLMKFFCV 399
L K + L+ +++++M E GK V +R M K C+
Sbjct: 193 HLCKFTRLQQAYEVFEKMAEGPCACTEPAYSVLFNKLQRAGKLVEASRVYSDMCRKNVCM 252
Query: 400 NFR----VDLGLN-----------LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
V LGL+ L ++ + P +A +L+ GLC R EA E
Sbjct: 253 TDNTYSLVVLGLSKMDGGNVEAAKLVTEMMGKKIAPDFYAYSILINGLCKARRPGEAKEM 312
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
++M R + +Y L L+ + KL+D
Sbjct: 313 FQEMRGRGISPTVVTYNTLLEGLL---STAKLQD 343
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 178/406 (43%), Gaps = 15/406 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A E F+ ++ P + + L + + D+A L+ +++ S T + +
Sbjct: 132 EARELFR-SMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSP-TFVTYTT 189
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
++ + KF ++ E F++M G ++VL ++ EA V+ +
Sbjct: 190 LIDHLCKFTRLQQAYEVFEKMAE----GPCACTEPAYSVLFNKLQRAGKLVEASRVYSDM 245
Query: 205 LSR-FAPNNKTMNILLLGFK--ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + T ++++LG + G+V A ++ EM+ + P Y+I I+G CK
Sbjct: 246 CRKNVCMTDNTYSLVVLGLSKMDGGNVEAAKLV-TEMMGKKIAPDFYAYSILINGLCKAR 304
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
G+A +F+EM P++ T TL+ G + A +L M + PD +YN
Sbjct: 305 RPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQGRLPDTCSYN 364
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
MI D N A L +M + I + TY+ M G +K L+ RM G
Sbjct: 365 LMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQSG 424
Query: 382 KF----VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
K P T +L+ C +V+ L + D+GF P ++L++ L GR
Sbjct: 425 KNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGR 484
Query: 438 WEEAFECSKQML-VRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
++AFE K+M + +Q+ +S +L L + + +E + L +M
Sbjct: 485 LDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQM 530
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/189 (31%), Positives = 90/189 (47%), Gaps = 1/189 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN N L+ ++G + E + M + P+VV+YNI IDGYCK A+
Sbjct: 8 PNAILYNNLISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAF 66
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EME + P+ ++++ N+ +A +F EMP + +PDI +N ++S L R
Sbjct: 67 LREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWR 126
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
R ++ A EL M + D VTY+TM GL K L+ L +RM + P T
Sbjct: 127 ARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVT 186
Query: 390 VVMLMKFFC 398
L+ C
Sbjct: 187 YTTLIDHLC 195
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/258 (20%), Positives = 107/258 (41%), Gaps = 5/258 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N++++ FC + EA +F ++ N T N +++GF + ++ M + M
Sbjct: 363 YNLMIRGFCANGDTNEAYCLFQDMIKDGIVLNTWTYNFMIVGFIKDEAWSSAWMLFKRMQ 422
Query: 240 L----RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+ P++ TY I I CK +A +L M +PSL+ L+
Sbjct: 423 SGKNDKVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARA 482
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A +L+ EM + N + +G+ N ++ ++R ++ A + + +M + I D TY
Sbjct: 483 GRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGIVPDKFTY 542
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ GL + KL + ++ P+ + + L+ C + +L
Sbjct: 543 DKLVVGLCWQGKADQARKLVEELVRDGKRPENQGLRQLLGALCAQGDFQGAYEFYCWLPS 602
Query: 416 RGFCPHGHALDLLVTGLC 433
G + LVT C
Sbjct: 603 VGVEVTLGMHNTLVTSCC 620
>gi|125524465|gb|EAY72579.1| hypothetical protein OsI_00445 [Oryza sativa Indica Group]
Length = 1014
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 71/245 (28%), Positives = 123/245 (50%), Gaps = 2/245 (0%)
Query: 191 QKEM-KEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+KE+ +EA S+ KL PN N L+ ++ + + EM RG P+ V
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I I CK+G DA+ LF++M ++ +LI+G ++ +AR L M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K L P +Y+ +I+ L R DL++AMEL EM E+ I +N T+ + G K +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ +L+D+MI+ +P T ++++ +C+ + L+ +++ G P + L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 429 VTGLC 433
++GLC
Sbjct: 555 ISGLC 559
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 102/418 (24%), Positives = 173/418 (41%), Gaps = 45/418 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P A+ + L + FD A L + + P+ +T +I++ + K E+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY---AILIHALCKRGMIED 391
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
L FD+M + GI K +N L+ +C Q + AR + ++ P + +
Sbjct: 392 ALCLFDKMRDK---GI-KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +GD+++ + EM RG + T+ I+G+CK +A RLF++M
Sbjct: 448 PLIAGLCRNGDLSSAMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P+ T +I G LV NI +A QL+D+M + LKPD Y ++IS L ++ A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM----IEGKFVPKTRTVVM 392
E + ++E +N + + +GL + L+D M ++ V T V
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627
Query: 393 LMKFF-----CVNFR-----------------VDL---------GLNLWGYLIDRGFCPH 421
+K CV FR +D LN W ++ G+ P+
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPN 687
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+L+ LC G A K+ML ++ +Y Y EK +DL
Sbjct: 688 TVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 134/304 (44%), Gaps = 2/304 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC K+M EA +F K++ S PN T N+++ G+ G++ Y +MV
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P TY I G C A ++E + + ++T L++G
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGLFREGRFT 600
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L+DEM R +K D+ ++ ++ + ++ D + L EM+E+ + D++ Y M
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +D+M+ + P T T +L+ C + + L ++
Sbjct: 661 DALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + + + G E+A + ML + S S+ +L + L +A ++ DL
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQEAIDL 779
Query: 480 DRMI 483
R I
Sbjct: 780 MRKI 783
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ M+ +SK ++ + L +D+M + + + VL+ C + A +
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVIDGY----SPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L+ PN T N L F GD+ + H +L+G S+V++NI I G CK G
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HSAMLQGHLASIVSFNILIKGLCKAG 771
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ L ++ P + +T+IH + +I++A +L++EM + LKPD+ AYN
Sbjct: 772 KIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
I + + A+ + M + + TY + G+
Sbjct: 832 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 143/313 (45%), Gaps = 7/313 (2%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+A E ++ ++ ++ ++L S++ +L + + + ET +D M G+ K
Sbjct: 566 KANEFVADLENSY-AVLNNFSLTALLYGLFREGRFTETYHLWDEMAVR---GV-KLDLVS 620
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +++ A Q + +++ +F ++ + P++ ++ + ++ + +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G+ P+ VT+ + I+ CK G G A L +EM LP+ T + ++
Sbjct: 681 IDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L M + +L I ++N +I L + + A++LM ++ E D ++Y T+
Sbjct: 741 KAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTII 799
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +L++ M+ P + +++ V+ D L ++ +I G
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 420 PHGHALDLLVTGL 432
P+ L++G+
Sbjct: 860 PNWDTYRALLSGI 872
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 68/326 (20%), Positives = 119/326 (36%), Gaps = 37/326 (11%)
Query: 197 ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR +F K+L S + + + ES ++ M G + S V YN+ +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------AGLVR 296
G CK +A+ + M + T TL++G G V
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301
Query: 297 NIHQARQLFDEMPKRNL----------------KPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + DE+ K+ L P++ AYNA+I L + + A L
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + + + VTY + L K +E L+D+M + L+ +C
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+D L ++ G P + L+ GLC G A E ++M R + ++
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSAMELHREMAERGIAWNNYTF 481
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++ + +E D+MI +
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDS 507
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/339 (19%), Positives = 128/339 (37%), Gaps = 36/339 (10%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNIL 218
+AF ++ + +G++ + + L+ C + +A L + +A NN ++ L
Sbjct: 531 KAFQLYDQMVEMGLKP-DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L G G T + EM +RG + +V++ I + K+ + LF EM+
Sbjct: 590 LYGLFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T +I N+ QA +D+M P+ + +I++L + L +A
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVIDGYSPNTVTHTVLINNLCKSGYLGSAEL 709
Query: 339 LMDEMEEKRI--------------------------------GH--DNVTYHTMFFGLMK 364
L EM + GH V+++ + GL K
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCK 769
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L ++ E F P + ++ C ++ LW ++ +G P A
Sbjct: 770 AGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 829
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ + G ++A M+ Q + +YR L
Sbjct: 830 YNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+R AR LFD+M + + D Y A I + R+L+ A L+ ME + + V
Sbjct: 176 IRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVP 235
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + +GL K+ ++ ++ + M+ T L+ FC +++ L + +I
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P ++ L + EEAF + ++ + +Y L L + NE
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK---NE 352
Query: 475 KLEDLDRMIKNLQA 488
+ +D DR+ K +
Sbjct: 353 RFDDADRLFKEMAG 366
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L++ C +++EA + K+ S F+P+ + + ++ + GD+ ++EM+
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMRKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+G +P VV YNI I G A+ ++ M R P+ T L+ G L+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875
>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 584
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 200/475 (42%), Gaps = 57/475 (12%)
Query: 53 TLLQHL--PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
+LL +L +T+ S L E ++ + S L + ++ + F P + F L
Sbjct: 79 SLLHYLTESETSKTKSRLYEVIINAYVQSQS--LDSSIYYFNEMVDKGFVPGSNCFNNLL 136
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
+ F+Q W + + +L + S I++ + E++ + +
Sbjct: 137 TFVVGSSSFNQWWCFFN--ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD--------LL 186
Query: 171 VGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLG-FK 223
V +R+FG + L+ C + E+++A+ +F ++ +F N T +L+ G FK
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKFGLVANEWTYTVLIHGLFK 245
Query: 224 ESGDVTAMEMF----------------------------------YHEMVLRGFRPSVVT 249
EM+ + EM RG ++VT
Sbjct: 246 NGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVT 305
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN I G C++ +A + ++M+ P+L T TLI G VR + +A L ++
Sbjct: 306 YNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLK 365
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
R L P + YN ++S + D + A +++ EMEE+ I VTY + +S +E
Sbjct: 366 SRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L M E P T +L+ FC+ R++ L+ ++++ F P+ + +V
Sbjct: 426 KAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMV 485
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMI 483
G C G A ++M + + ASYR + L + +++ E L ++MI
Sbjct: 486 LGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMI 540
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 164/359 (45%), Gaps = 8/359 (2%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F + L+ ++ + S + ++++ + QS + ++ F+ M + FV GS
Sbjct: 74 FFTSSSLLHYLTESETSKTKSRLYEVIINAYVQSQSLDSSIYYFNEMVDKGFVP----GS 129
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN LL + F + + + + I++ G E+G++ E+
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVEL 189
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
GF P+VV Y IDG CKKG A LF EM + + + T T LIHG L +N
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG--LFKNG 247
Query: 298 -IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
Q +++++M + + P++ YN +++ L + A ++ DEM E+ + + VTY+
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ GL + ++ D+M P T L+ FC ++ L+L L R
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
G P ++LV+G C +G A + K+M R + S+ +Y +L +++ EK
Sbjct: 368 GLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEK 426
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 107/208 (51%), Gaps = 5/208 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC +++ +A S+ L SR +P+ T NIL+ GF + GD + EM
Sbjct: 341 YNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +PS VTY I ID + + A++L ME + P + T + LIHG + ++
Sbjct: 401 ERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMN 460
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYHT 357
+A +LF M ++ +P+ YN M+ L C++ ++ A+ L EMEEK + + +Y
Sbjct: 461 EASRLFKSMVEKKFEPNEVIYNTMV--LGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
M L K + L ++MI+ P
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDSGIGP 546
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 80/167 (47%), Gaps = 10/167 (5%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +L+ F M++A RS +L P+ T ++L+ GF G + +
Sbjct: 411 YTILIDTFARSDNMEKAIQLRSSMEEL--GLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV + F P+ V YN + GYCK+G A+RLF EME P++ + +I R
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+A L ++M + IG +++++ + R ++ ++ MDE E
Sbjct: 529 SKEAEGLVEKM----IDSGIGPSDSILNLISRAKN-DSHSRSMDEEE 570
>gi|413918448|gb|AFW58380.1| hypothetical protein ZEAMMB73_073366 [Zea mays]
Length = 414
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 9/324 (2%)
Query: 70 ENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
N+L L A H A+ F+ +Q ++P +F + + R+ +A EL+ +
Sbjct: 50 NNLLNTLIA-HGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALELVERM 108
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
S T+ + +I++ + + + + E R++R+ G+ + ++ +C
Sbjct: 109 TEFGCSPDTI-TQNILVDGLCRVKQVNKGHEVLRRLQRD---GVCMPNVVTYTSVISGYC 164
Query: 190 TQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
MK+A SV+ +L S PN T N+L+ G+ ++ D+ + Y +++L P VV
Sbjct: 165 KAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVV 224
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+N IDGYC+ G DAMR++ EM + P++ T + +IH +A L E+
Sbjct: 225 TFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLREL 284
Query: 309 PKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG-LMKSS 366
R ++ P YN +I L + ++ A ++ +MEEK D TY + G MK
Sbjct: 285 NMRADIVPQTFIYNPIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGR 344
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTV 390
E V L+ +M+E P T+
Sbjct: 345 IPEAV-TLFHKMVETGCRPDNITI 367
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 132/290 (45%), Gaps = 13/290 (4%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNI 217
+A E I G+ FNV+++ C +++A V+ ++ F +P+ T NI
Sbjct: 64 DAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQKALE-LVERMTEFGCSPDTITQNI 122
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFR-----PSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
L+ G V HE++ R R P+VVTY I GYCK G DA ++ +
Sbjct: 123 LVDGLCRVKQVNKG----HEVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYND 178
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M + P+ T LI+G G ++ A +++ ++ + PD+ +N++I RC
Sbjct: 179 MLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQ 238
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLM-KSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
L+ AM + EM + I + T+ + L ++ E + L + + VP+T
Sbjct: 239 LDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYN 298
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ C +VD + + ++G P + +L+ G C +GR EA
Sbjct: 299 PIIDILCKGGKVDEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEA 348
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/276 (19%), Positives = 119/276 (43%), Gaps = 10/276 (3%)
Query: 189 CTQKEMKEARSVFVKLLSRFA------PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
CT + +A + + S F N +N L+ + V E + + +
Sbjct: 21 CTNAGLLDAAANLLTKGSWFGCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGL--- 77
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ P V ++N+ I G C+ G A+ L E M C P T L+ G V+ +++
Sbjct: 78 YSPDVWSFNVVIKGVCRVGNLQKALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGH 137
Query: 303 QLFDEMPKRNL-KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
++ + + + P++ Y ++IS + + A + ++M + + VTY+ + G
Sbjct: 138 EVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLING 197
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
K+ +E ++Y ++I P T L+ +C ++D + +W + P+
Sbjct: 198 YGKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPN 257
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
+ +++ LC++ R EA +++ +R V +
Sbjct: 258 VYTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQ 293
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/309 (21%), Positives = 123/309 (39%), Gaps = 46/309 (14%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSH 128
NV+ + N KALE + + F +PD + + + L R++ ++ E++
Sbjct: 86 NVVIKGVCRVGNLQKALELVE---RMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRR 142
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
+QR + + + + ++S K ++ ++ M + G R + +NVL+ +
Sbjct: 143 LQRDGVCMPNVVTYTSVISGYCKAGRMKDAFSVYNDMLQS---GTRP-NTVTYNVLINGY 198
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+M+ A ++ +L L P+ T N L+ G+ G + + EM +P+V
Sbjct: 199 GKALDMESAVRMYWQLILHSCPPDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNV 258
Query: 248 VT------------------------------------YNIRIDGYCKKGCFGDAMRLFE 271
T YN ID CK G +A +
Sbjct: 259 YTFSIIIHSLCTQNRSAEALSLLRELNMRADIVPQTFIYNPIIDILCKGGKVDEANLIVT 318
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ME C P T T LI G + I +A LF +M + +PD N+ IS +++
Sbjct: 319 DMEEKGCHPDKYTYTILIIGHCMKGRIPEAVTLFHKMVETGCRPDNITINSFISCVLKAG 378
Query: 332 DLNAAMELM 340
N ++M
Sbjct: 379 MPNEVHQIM 387
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 3/255 (1%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL-PSLQTITTLIHGAGLVRNIHQ 300
G R YN ++ G DA+ LFE + P + + +I G V N+ +
Sbjct: 41 GCRIEWYAYNNLLNTLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRVGNLQK 100
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTMF 359
A +L + M + PD N ++ L R + +N E++ ++ + NV TY ++
Sbjct: 101 ALELVERMTEFGCSPDTITQNILVDGLCRVKQVNKGHEVLRRLQRDGVCMPNVVTYTSVI 160
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ ++ +Y+ M++ P T T +L+ + ++ + ++ LI
Sbjct: 161 SGYCKAGRMKDAFSVYNDMLQSGTRPNTVTYNVLINGYGKALDMESAVRMYWQLILHSCP 220
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ G C G+ ++A +M Q + ++ ++ L N + + L
Sbjct: 221 PDVVTFNSLIDGYCRCGQLDDAMRIWMEMGQHHIQPNVYTFSIIIHSLCTQNRSAEALSL 280
Query: 480 DRMIKNLQAVLPPPT 494
R + N++A + P T
Sbjct: 281 LREL-NMRADIVPQT 294
>gi|255660848|gb|ACU25593.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 418
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 92/320 (28%), Positives = 147/320 (45%), Gaps = 19/320 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E F+ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECFRLTRKHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPT--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
++ R K E R+ + +F I K G FN L+ + ++ + +
Sbjct: 142 LMHRFCK--------EGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRL 193
Query: 201 FVKL-LSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ S P+ T +L+ G KES A E+F +EM+ +G P+ VT+ IDG+C
Sbjct: 194 KTAMHASGVHPDVYTNTVLINGLCKESKMDEANELF-NEMLDKGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G A+ ++++M R P L T TLI+G ++ QAR L EM + LKPD
Sbjct: 253 KSGRVDLALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A EL M E+ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFC 398
+ P+ T M++ FC
Sbjct: 373 LSVGLKPENGTYTMIINGFC 392
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 175/403 (43%), Gaps = 37/403 (9%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---YE 156
P F TLH ++ M H TH +L KS+ I++SR K + +
Sbjct: 4 PGNSTFRHTLH----------SYCTMIHFLSTHQRILEAKSLIQIVVSRKGKDSASAVFA 53
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR----FAPNN 212
LE +I+V F+ L+ A+ +++A F L+R + P +
Sbjct: 54 AILETKGAQRSDIYV---------FSGLITAYLESGFLRDAIECF--RLTRKHKFWVPFD 102
Query: 213 KTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+L L+ K V FY E++ G+ S+ +NI + +CK+G A +F
Sbjct: 103 TCRKVLEHLMKLKYFKLVWG---FYKEILECGYPTSLYFFNILMHRFCKEGEIRLAQSVF 159
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
+ + + PS+ + TLI+G + ++ + +L M + PD+ +I+ L +
Sbjct: 160 DAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHASGVHPDVYTNTVLINGLCKE 219
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
++ A EL +EM +K + + VT+ T+ G KS ++ ++Y +M+ + P T
Sbjct: 220 SKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDLALEIYKQMLRQGYSPDLITY 279
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
L+ C + +L + +G P L+ G C G E AFE K+M+
Sbjct: 280 NTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMIE 339
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPP 493
++ + +Y L L Q + D ++M++ + +V P
Sbjct: 340 ESIRLDDVAYTALISGLCQEG---RAVDAEKMLREMLSVGLKP 379
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ F + G++ + + + G RPSVV++N I+GY + G RL M
Sbjct: 140 NILMHRFCKEGEIRLAQSVFDAITKCGLRPSVVSFNTLINGYIRLGDLDKGFRLKTAMHA 199
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T T LI+G + +A +LF+EM + L P+ + +I + ++
Sbjct: 200 SGVHPDVYTNTVLINGLCKESKMDEANELFNEMLDKGLVPNGVTFTTLIDGHCKSGRVDL 259
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+E+ +M + D +TY+T+ +GL + L+ L M P T L+
Sbjct: 260 ALEIYKQMLRQGYSPDLITYNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLID 319
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C ++ L +I+ A L++GLC GR +A + ++ML +
Sbjct: 320 GSCKEGDLETAFELRKRMIEESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKP 379
Query: 456 SEASYRML 463
+Y M+
Sbjct: 380 ENGTYTMI 387
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 60/140 (42%), Gaps = 36/140 (25%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV-TAMEM----- 233
+N L+ C + ++K+AR + V++ + P+ T L+ G + GD+ TA E+
Sbjct: 279 YNTLIYGLCRKGDLKQARDLIVEMSMKGLKPDKITYTTLIDGSCKEGDLETAFELRKRMI 338
Query: 234 -----------------------------FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
EM+ G +P TY + I+G+CK+G
Sbjct: 339 EESIRLDDVAYTALISGLCQEGRAVDAEKMLREMLSVGLKPENGTYTMIINGFCKQGDVK 398
Query: 265 DAMRLFEEMERVACLPSLQT 284
A +L +EM+R +P + T
Sbjct: 399 TASKLLKEMQRDGHVPCVVT 418
>gi|449491189|ref|XP_004158824.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Cucumis sativus]
Length = 450
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 102/439 (23%), Positives = 193/439 (43%), Gaps = 21/439 (4%)
Query: 44 PFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPT 102
P P+ + P T V L ++ N K + EFF + F T
Sbjct: 25 PIPEFDFKFNTSERRPTHTNFDPFTVREALD----SYCNDWKRSYEFFNWVESECKFDHT 80
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+ + + L IL + FD +W L++ ++++ + + I+ R + E + A+
Sbjct: 81 TETYNRMLDILGKFFEFDLSWVLINRMRQSPSASPDHATFRILFKRYALAHLVSEAIAAY 140
Query: 163 DRMEREIFVGIRKFGSE-EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM--NILL 219
+R+ RE K E F L+ A C + + EA+ + + ++ T N++L
Sbjct: 141 ERL-REF-----KLRDETSFCNLIDALCESRHVDEAQELCFGKNRKLDCDSSTKIHNLIL 194
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ + G + F+ EM +G R + +Y+I +D CK G A++L++EM++
Sbjct: 195 RGWLKMGWWSKCRDFWEEMDKKGVRKDLHSYSIYMDIQCKSGKPWKAVKLYKEMKKKGMK 254
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
+ T+IH G+ + A ++F EM + KP++ N +I A +
Sbjct: 255 LDVVAYNTVIHAVGISEGVDFASRVFHEMKEMGCKPNVVTCNTVIKLFCENGRFKDAHMM 314
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+D+M ++ + +TYH F L K + + L+DRMI+ PK T VML++ F
Sbjct: 315 LDQMLKRDCQPNVITYHCFFRSLEKP---KEILVLFDRMIKYGVHPKMDTYVMLLRKFGR 371
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR----RRQV 455
+ +W + + G P+ A + L+ L +G + A + ++M+ + + +V
Sbjct: 372 WGFLRPVFLVWNKMEELGCSPNECAYNALIDALVEKGMIDMARKYDEEMVAKGLSPKLRV 431
Query: 456 SEASYRMLQRYLVQANANE 474
+ M Y N N+
Sbjct: 432 ELGTQMMNGGYHANVNCNK 450
>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
Length = 501
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/354 (23%), Positives = 163/354 (46%), Gaps = 6/354 (1%)
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
L I+K + Y + ++M+ G+ N+L+ + C + A SV K+
Sbjct: 93 LGSIAKKKQYSTVVSLCNQMD---LFGVAH-NDYTLNILINSLCRLSHIHFAVSVLSKMF 148
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P++ T L+ G G + ++EM R P+ VT+ I +D CKKG
Sbjct: 149 KLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCKKGMVS 208
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A +FE M P++ T L++G L ++ A ++F+ M + P + +Y+ +I
Sbjct: 209 EARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILI 268
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ + R ++ A L+ +M EK + + VTY+T+ GL +S L +L+ +M +
Sbjct: 269 NGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGML 328
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P RT +L+ C + ++ L L + +R P ++L+ G+ G+ E A E
Sbjct: 329 PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKEL 388
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQQV 498
++ + S +Y ++ + L++ +++ L R +++ LP V
Sbjct: 389 FSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMED-DGFLPDSCSYNV 441
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L+ C + + EAR VF + + PN T N L+ G+ ++ + MV
Sbjct: 194 FTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIMV 253
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSV +Y+I I+GYCK +A L +M +P+ T TL+ G ++
Sbjct: 254 GKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLL 313
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A++LF +M + P++ Y+ ++ L + L A++L+ M+E+++ D V Y+ +
Sbjct: 314 EAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILI 373
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + LE +L+ ++ P RT +++K D L+ + D GF
Sbjct: 374 QGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFL 433
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + ++++ G A + +M+ RR ++++ML
Sbjct: 434 PDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKML 477
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 120/250 (48%), Gaps = 1/250 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C + EM +A VF ++ + AP+ + +IL+ G+ +S + + +M
Sbjct: 229 YNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMS 288
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ VTYN + G C +A LF++M LP+L+T + L+ G ++
Sbjct: 289 EKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLE 348
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L M +R L+PDI YN +I + L A EL ++ I TY+ M
Sbjct: 349 EALKLLTSMQERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMI 408
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL+K + KL+ +M + F+P + + ++++ F N + L ++ R F
Sbjct: 409 KGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFS 468
Query: 420 PHGHALDLLV 429
+L+
Sbjct: 469 ADSSTFKMLL 478
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
AM FY M+ RPS V + KK + + L +M+ + T+ LI
Sbjct: 70 AMASFYR-MIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ + +IH A + +M K ++PD + +I+ L + A+EL +EM +
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAM 188
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
+ VT+ + L K + +++ M E P T LM +C+ ++ +
Sbjct: 189 PNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKV 248
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ +G P H+ +L+ G C R +EA QM + + +Y L + L
Sbjct: 249 FEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCH 308
Query: 470 ANA 472
A++
Sbjct: 309 ASS 311
>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
Length = 609
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 145/313 (46%), Gaps = 10/313 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
++ ++ FC Q EM A + ++++R AP+ T ++ G G + EM
Sbjct: 48 YSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREM 107
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
L+G P T++ I G+C +A++L++E+ +C + + LI G R I
Sbjct: 108 KLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRI 167
Query: 299 HQARQLFDEMPKRN---LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+A +LF EM R KPD+ Y A+I + +L AM+++ ME ++ + VTY
Sbjct: 168 GEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTY 227
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
++ GL K+ L+ L+ RM VP T L+ C +VD L +
Sbjct: 228 SSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTA 287
Query: 416 RGFCPHGH-ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
CP + + L+ G C GR EEA + K+M + +Y L R A+
Sbjct: 288 T-CCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS--- 343
Query: 475 KLEDLDRMIKNLQ 487
+LE+ +++N++
Sbjct: 344 RLEEARFLLENMK 356
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 105/426 (24%), Positives = 181/426 (42%), Gaps = 26/426 (6%)
Query: 75 RLFAAHSNGL-------KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
R + NGL KA E K P + ++ + D+A E++
Sbjct: 10 RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 69
Query: 128 H-VQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
V R P ++T S+ L R K E M RE+ + + F+ L
Sbjct: 70 EMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACE-------MVREMKLKGVEPDKFTFSAL 122
Query: 185 LQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-- 241
+ +C +++ EA ++ ++L S + + + L+ G + + EM +R
Sbjct: 123 ITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRED 182
Query: 242 -GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
++P VVTY IDG+CK G AM++ ME C+P++ T ++L+HG ++ Q
Sbjct: 183 GAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQ 242
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A LF M + P++ Y +I L ++AA LMDEM D V+Y+ +
Sbjct: 243 ALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLD 302
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL-IDRGFC 419
G + +E +L+ M +P T L++ FC R++ L + G
Sbjct: 303 GYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGID 362
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN----ANEK 475
P ++V G R+ EA E ++M+ R + +Y L L +A A E
Sbjct: 363 PDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEV 422
Query: 476 LEDLDR 481
L+++D+
Sbjct: 423 LKNVDK 428
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/425 (20%), Positives = 170/425 (40%), Gaps = 28/425 (6%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--P 134
F N KA++ ++ P + LH L + DQA +L + P
Sbjct: 199 FCKSGNLEKAMKMLGV-MEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVP 257
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
+++T ++ L K ++A + E+ + +N LL +C +
Sbjct: 258 NVVTYTTLIHGLCAAHK-------VDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRI 310
Query: 195 KEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEM-VLRGFRPSVVTYNI 252
+EA+ +F ++ ++ P+ T L+ GF + + M G P VVTY+I
Sbjct: 311 EEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSI 370
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+ GY + F +A +EM P+ T ++LI G ++ A ++ + K
Sbjct: 371 VVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK-- 428
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
PD+ Y +I L A+ L++EM KR+ T++++ L + ++
Sbjct: 429 --PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAW 486
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG--------FCPHGHA 424
KL M P T L++ F R+++ L+ + + P A
Sbjct: 487 KLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE-QA 545
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
L+ GLC ++A +++ R + +E + L++A + E+ ++I
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAG---RTEEAGKLIN 602
Query: 485 NLQAV 489
++ V
Sbjct: 603 SISKV 607
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 40/244 (16%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+ TYN+ ++G CK A + +EM + + P L T +T+I+G + +A +
Sbjct: 7 PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66
Query: 304 LFDEMPKRN-LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ EM R+ + PD+ Y +++ L R ++ A E++ EM+ K + D T+ + G
Sbjct: 67 ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGW 126
Query: 363 MKSSGLEGVCKLYDRMI--------------------------------------EGKFV 384
+ ++ KLY ++ +G +
Sbjct: 127 CNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWK 186
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ FC + ++ + + G + R P+ L+ GLC G ++A +
Sbjct: 187 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 246
Query: 445 SKQM 448
++M
Sbjct: 247 FRRM 250
Score = 45.1 bits (105), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 97/244 (39%), Gaps = 30/244 (12%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
++A EF + + + P + + L + + A E++ +V + P ++T +
Sbjct: 382 VEAAEFIQEMIAR-NVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK--PDVVTY---T 435
Query: 144 IMLSRISKFQSYEETLEAFDRMER---EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
I++ + EE L + M E VG FN ++ A C +M EA +
Sbjct: 436 IVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGT-------FNSVIGALCRLGDMDEAWKL 488
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYH--EMVLRGFRPSVVTYNIR---- 253
V + + P T LL GF +G ME+ Y E++ R + S N+
Sbjct: 489 LVAMAAHGLEPGMVTYTTLLEGFSRTGR---MEIAYELFEVMRRKAKKSSSAANLVPEQA 545
Query: 254 ----IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
I G CK AM + EE+ C P+ + ++ G +A +L + +
Sbjct: 546 FSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSIS 605
Query: 310 KRNL 313
K L
Sbjct: 606 KVGL 609
>gi|147821100|emb|CAN70963.1| hypothetical protein VITISV_038268 [Vitis vinifera]
Length = 844
Score = 114 bits (286), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L++A C + ++ A V ++ + F PN T +L G+ GD+ + E++
Sbjct: 245 NILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD 304
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG+ P TY I +DGYCKKG F DA+++ +EME P+ T +I + +
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE 364
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
L D+M ++ P +I L + A EL ++ +K DN T+
Sbjct: 365 VLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIH 424
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K + KL+D +G +P T T L+ C + LW ++++G P
Sbjct: 425 WLCKEGKVWEARKLFDEFEKGS-IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVP 483
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+ ++L+ G C G E ++ML ++A+Y +
Sbjct: 484 NAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 10/349 (2%)
Query: 97 PHFTPTPDAF--EKTLHILARMRYFDQAWELMSHVQRTHPSLL-TLKSMSIMLSRISKFQ 153
P P P ++ + +++R + D A ++ H + H + ++ M+ ++SK +
Sbjct: 90 PPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKAR 149
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNN 212
++E ++ + K G F +++ + K A F+++ S P+
Sbjct: 150 AFEPMETLISQLHKSQI----KCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSV 205
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
++ N LL ++ + + + + G P+V T NI + CKK A+R+ E
Sbjct: 206 RSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLE 265
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM + +P++ T TT++ G ++ AR++F E+ R PD Y ++ +
Sbjct: 266 EMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKG 325
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A+++MDEMEE R+ ++VTY + K V L D M+E K++P +
Sbjct: 326 RFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCC 385
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR-WE 439
++ C +V++ LW L+ + P L+ LC G+ WE
Sbjct: 386 RVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 11/225 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYE 156
+ P P + + + F A ++M ++ R P+ +T +++ K +
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTY---GVIIEAYCKEKKSG 363
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E L D M + ++ ++L C + +++ A ++ KLL + P+N
Sbjct: 364 EVLNLLDDMLEKKYIPSSALCCRVIDML----CEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ + G V + E +G PS +TYN I G C+ G +A RL++ M
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFE-KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
C+P+ T LI G V N + ++ +EM P+ Y
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
>gi|414885390|tpg|DAA61404.1| TPA: hypothetical protein ZEAMMB73_280584 [Zea mays]
Length = 645
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 167/417 (40%), Gaps = 50/417 (11%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
+ST LG L A S + L+ + + P A L L + R AWE
Sbjct: 114 TSTTPAPALGVLVIALSQ-MGLLDEALYVFRRLRTLPALPACNAVLDGLVKARRPGCAWE 172
Query: 125 LMSHVQRTH--PSLLTLKSMSIMLSRISKFQ-SYEETLEAFDRM-EREIFVGIRKFGSEE 180
L + R PS++T + L +FQ + + E +D+M ++I + +
Sbjct: 173 LFDEMLRRGLVPSVVTYNT----LINACRFQGTVAKAQEVWDQMVAQQIDPNVVTY---- 224
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ A C + + +A +F + + PN T N+L+ G + DV + + Y E++
Sbjct: 225 -TTMICALCEEGCIGDAERLFDAMKEAGMQPNQYTYNVLMSGHCQRDDVNSAVVLYQELL 283
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V + IDG+CK F +A +F EM R P++ +L+ GA N
Sbjct: 284 KSGLNPNAVIFTTLIDGFCKAKRFSEAKGMFLEMPRFGVAPTVPVYNSLMDGAFRSGNAQ 343
Query: 300 QARQLFDEMPKRNLKPD-----------------------------------IGAYNAMI 324
+A L+ EM + L PD AYNA+I
Sbjct: 344 EALALYQEMTRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALI 403
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
R +L A+ M E I + V+Y ++ G K ++ +Y M+
Sbjct: 404 DEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIE 463
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T L+ N +D L +I+ G P+ + +LV GLC R +EA
Sbjct: 464 PNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEA 520
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 114/310 (36%), Gaps = 55/310 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEM 238
F L+ FC K EA+ +F+++ RF AP N L+ G SG+ Y EM
Sbjct: 294 FTTLIDGFCKAKRFSEAKGMFLEM-PRFGVAPTVPVYNSLMDGAFRSGNAQEALALYQEM 352
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P T +I + G C G A R + ++ + LI + N+
Sbjct: 353 TRLGLCPDEFTCSIVVRGLCDGGQMHVADRFLQGVQEDGVNLNAAAYNALIDEYCRIGNL 412
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A M + ++P++ +Y+++I + + AM + EM K I + VTY +
Sbjct: 413 EEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIYTEMVAKGIEPNVVTYTAL 472
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC-------------------- 398
G K+ G++ +L+ MIE P TV +L+ C
Sbjct: 473 IHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRENRVQEAVRFVMEYSGLKC 532
Query: 399 -------VNFRVD---------------LGLNLWG----------YLIDRGFCPHGHALD 426
NF ++ GL L G Y+ G P
Sbjct: 533 SDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQHCEAGKLFSYMRKSGMIPDSFTYT 592
Query: 427 LLVTGLCSRG 436
LL+ G C G
Sbjct: 593 LLIRGQCMLG 602
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/228 (23%), Positives = 96/228 (42%), Gaps = 19/228 (8%)
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N N L+ + G++ M G P+VV+Y+ IDG+ K+G AM ++
Sbjct: 395 NAAAYNALIDEYCRIGNLEEALATCTRMTEVGIEPNVVSYSSLIDGHSKRGKMQIAMAIY 454
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR- 329
EM P++ T T LIHG I A +L EM + + P+ + ++ L R
Sbjct: 455 TEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVDGLCRE 514
Query: 330 -----------------CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
C D+++ +EE+ + ++V Y T+ +GL
Sbjct: 515 NRVQEAVRFVMEYSGLKCSDIHSVFSNF-TIEEECLIPNSVIYMTLIYGLYLDGQHCEAG 573
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
KL+ M + +P + T +L++ C+ V + L+ ++ G P
Sbjct: 574 KLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMKIGVKP 621
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/227 (22%), Positives = 97/227 (42%), Gaps = 23/227 (10%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
L + + ++ + + EE L RM VGI ++ L+ + +M+
Sbjct: 394 LNAAAYNALIDEYCRIGNLEEALATCTRMTE---VGIEP-NVVSYSSLIDGHSKRGKMQI 449
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A +++ +++++ PN T L+ G ++G + A + EM+ G P+ +T ++ +D
Sbjct: 450 AMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRLHKEMIENGISPNAITVSVLVD 509
Query: 256 GYCKKGCFGDAMRLFEEMERVAC-----------------LPSLQTITTLIHGAGLVRNI 298
G C++ +A+R E + C +P+ TLI+G L
Sbjct: 510 GLCRENRVQEAVRFVMEYSGLKCSDIHSVFSNFTIEEECLIPNSVIYMTLIYGLYLDGQH 569
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMI-SSLIRCRDLNAAMELMDEME 344
+A +LF M K + PD Y +I + LNA M D M+
Sbjct: 570 CEAGKLFSYMRKSGMIPDSFTYTLLIRGQCMLGYVLNAMMLYADMMK 616
>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g65560-like [Cucumis sativus]
Length = 839
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 150/349 (42%), Gaps = 12/349 (3%)
Query: 98 HFTPTPDAFEKTLHILARMRY--FDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQ 153
H+ PD F T I+ + D A+E+ + + P+ +T ++ I+
Sbjct: 230 HYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSAL------INGLC 283
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
S EA D +E I GI + + + + C EA + K+ R PN
Sbjct: 284 SEGRLEEAMDMLEEMIDKGIEP-TVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNV 342
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T L+ G G YH+M+ G P+ VTY+ I+ +G F A+ +FE
Sbjct: 343 QTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEW 402
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M LP+ +T +I G + I +A +FD+M K P++ YN +I +
Sbjct: 403 MLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGY 462
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+N AM L++ M+ + D TY + G + LE L++ M+E P T
Sbjct: 463 MNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNA 522
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ + +VD L L+ +++ G P +++++G R EA
Sbjct: 523 IINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 92/359 (25%), Positives = 155/359 (43%), Gaps = 38/359 (10%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+++ + ++S +S+ +E + + +M + V + ++ L+ + + A
Sbjct: 341 NVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPT----AVTYSALINQLYVEGRFETA 396
Query: 198 RSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++F +LS + PN +T N+++ GF G + + +M+ G P+V+TYNI I
Sbjct: 397 LTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHI 456
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y K+G +AMRL E M+ T LI G + A LF+EM + + P+
Sbjct: 457 YFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPN 516
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ YNA+I+ + ++ A+ L +M E + TY+ M G K++ +
Sbjct: 517 VVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCG 576
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-------------NLWGY--LIDRGFCPH 421
+M++ +P T + C N R L NL Y LID G C
Sbjct: 577 KMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLID-GLCQE 635
Query: 422 GHALD-----------------LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G A D LV GLC +GR EA + + M + Q SE YR L
Sbjct: 636 GQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRAL 694
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 102/453 (22%), Positives = 185/453 (40%), Gaps = 27/453 (5%)
Query: 41 NDHPFPDQPLHPTLLQHLP------QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTL 94
N PFP+ +++ P + + L L + + L H+N L FF +
Sbjct: 43 NTDPFPELVSKISIILSSPTWERSSELSHLIPKLKPHHVVNLLDTHNNTESVLRFFHWVS 102
Query: 95 QHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQS 154
+ F F L+ L R R F A + + ++ + +K + +LS I+
Sbjct: 103 RTHFFKHDMSCFVSMLNRLVRDRLFVPADNVRILMIKSCRNEGEVKRVIQVLSEINTTYD 162
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNK 213
+ TL +F + + + KF + R V++++L S PN
Sbjct: 163 FGYTLYSFSTL----LIQLGKFDMDGL---------------GRDVYIEMLNSGIRPNLF 203
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N ++ G V E+ + G P TY I G+CK G A +F+ M
Sbjct: 204 TFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM 263
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+ C P+ T + LI+G + +A + +EM + ++P + AY I SL
Sbjct: 264 VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A++L+ +M+++ G + TY + GL + E +Y +M+ VP T L
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ V R + L ++ +++ P+ ++++ G CS G ++A QML
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443
Query: 454 QVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ +Y ++ Y Q N + L+ M N
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGN 476
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 138/336 (41%), Gaps = 40/336 (11%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNI------------------- 217
+E +NV+++ FC+ +++A ++F ++L +PN T NI
Sbjct: 412 TETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLE 471
Query: 218 ----------------LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
L+ GF G + ++EMV G P+VVTYN I+GY
Sbjct: 472 MMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVA 531
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
DA+ LF +M +PS T +I G I +A +M K+ L P++ Y
Sbjct: 532 KVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYT 591
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+ I L + + A ++ EM+++ + TY ++ GL + EG + +R+++
Sbjct: 592 SFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ----EGQAEDAERLLDD 647
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T L++ C R L + +G P L+ G C E A
Sbjct: 648 GCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESA 707
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
+ M+ Q + Y+ L L +AN +K +
Sbjct: 708 LKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQ 743
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/381 (22%), Positives = 151/381 (39%), Gaps = 77/381 (20%)
Query: 53 TLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA--FEKTL 110
T+ + + L +T NV+ + F + KA F L+ P+P+ + +
Sbjct: 398 TIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKA---GPSPNVITYNIII 454
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
HI + Y + A L+ ++ L T + + ++S S+ E F+ M
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTW-TYANLISGFSRGGKLEHAFSLFNEMVEH-- 511
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT 229
GI +N ++ + T ++ +A ++F K++ S P++ T N+++ GF ++ ++
Sbjct: 512 -GISP-NVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRIS 569
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---------------- 273
E F +MV +G P+V+TY IDG CK G A ++F EM
Sbjct: 570 EAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLI 629
Query: 274 ------------ERV---ACLPSLQTITTLIHG--------------------------- 291
ER+ C P++ T TTL+ G
Sbjct: 630 DGLCQEGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689
Query: 292 ------AGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
G +N + A ++FD M +P + Y A+I +L + A + M
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749
Query: 344 EEKRIGHDNVTYHTMFFGLMK 364
+K D V + + GL+K
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLK 770
>gi|410109869|gb|AFV61014.1| pentatricopeptide repeat-containing protein 11, partial
[Acantholippia seriphioides]
Length = 414
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 153/352 (43%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 74 AIECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGFYQEILECGYPA--SLYFFNI 130
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+G +N L+ + ++ E R
Sbjct: 131 LMHRFCK--------EGNIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRL 182
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM++ G P VT+ IDG+CK
Sbjct: 183 KSAMHASGVQPDVYTYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCK 242
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G B+ QA L EM + KPD
Sbjct: 243 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKIT 302
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 303 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 362
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P TRT M++ FC V G L + G P ++L+ G
Sbjct: 363 SVGXKPDTRTYTMIINEFCKKGDVWTGSKLLKEMQRDGHVPSVVTYNVLMNG 414
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/252 (23%), Positives = 107/252 (42%), Gaps = 36/252 (14%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G
Sbjct: 112 FYQEILECGYPASLYFFNILMHRFCKEG-------------------------------- 139
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
NI A+ +FD + K L+P + +YN ++S IR DL+ L M + D
Sbjct: 140 ---NIRVAQSVFDAITKWGLRPSVVSYNTLMSGYIRLGDLDEGFRLKSAMHASGVQPDVY 196
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + GL K ++ +L+D M+ VP T L+ C N RVDL + ++ +
Sbjct: 197 TYSVLINGLCKEXKMDEANELFDEMLVXGLVPXGVTFTTLIDGHCKNGRVDLAMEIYKQM 256
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANA 472
+ + P + L+ GLC +G ++A +M ++ + + +Y ++ + +
Sbjct: 257 LSQSLLPDLITYNTLIYGLCKKGBLKQAHVLIXEMSLKGXKPDKITYTTLIDGCCKEGDL 316
Query: 473 NEKLEDLDRMIK 484
+ E RMI+
Sbjct: 317 DTAFEHRKRMIQ 328
>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
Length = 962
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 176/404 (43%), Gaps = 19/404 (4%)
Query: 50 LHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
L+ +L Q + L+ + N+L + L + F++ L +PD F T
Sbjct: 227 LYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDL-------SPDVFTYT 279
Query: 110 LHILA--RMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
IL R R D A+ + + + P+ +T ++ I+ + EA D +
Sbjct: 280 SLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTL------INGLCNEGRVDEALDML 333
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKE 224
E I GI + + + A C + +EA + ++ R PN +T L+ G
Sbjct: 334 EEMIEKGIEP-TVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSR 392
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G + YH+M+ G P+ VTYN I+ C G F A+++F ME L + QT
Sbjct: 393 LGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQT 452
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+I G L +I +A LF++M K P + YN +I+ + ++N A L+D M+
Sbjct: 453 YNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMK 512
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
E D TY+ + G K LE + M+E P + L+ + +VD
Sbjct: 513 ENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVD 572
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ L+L + + G P+ + + ++ GL R+ EA + +M
Sbjct: 573 IALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKM 616
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 135/305 (44%), Gaps = 5/305 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
+++ + ++S +S+ E + + +M +E V + +N L+ C A
Sbjct: 379 NVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVP----NTVTYNALINELCVGGRFSTA 434
Query: 198 RSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+F + + N +T N ++ G GD+ + + +M+ G P+VVTYN I+G
Sbjct: 435 LKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLING 494
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y KG +A RL + M+ C P T L+ G + A F EM + L P+
Sbjct: 495 YLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPN 554
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+Y +I + ++ A+ L++ MEE + +Y+ + GL K + K+ D
Sbjct: 555 PVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICD 614
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+M E +P T L+ C N R ++ + R P+ + L+ GLC G
Sbjct: 615 KMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEG 674
Query: 437 RWEEA 441
+ +EA
Sbjct: 675 KADEA 679
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 181/424 (42%), Gaps = 22/424 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS L + + + A H + ++FF + + P + + F L+ L R R F A
Sbjct: 111 LSPQLKAHHVAEIVAVHKDTESVIQFFYWISKRPFYKHNMNCFISMLNRLVRDRVFAPA- 169
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
H +L +K+ ++ EE D + +G F N
Sbjct: 170 --------DHIRILMIKAC----------RNEEEIRRVADFLNEISGMGF-GFSLYSCNT 210
Query: 184 LLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
LL + ++ AR+++ ++L S P+ T N L+ + G V E+ ++
Sbjct: 211 LLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYD 270
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P V TY I G+C+ A +F+ M + C P+ T +TLI+G + +A
Sbjct: 271 LSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEAL 330
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +EM ++ ++P + Y I++L A+EL+ M+++ + TY + GL
Sbjct: 331 DMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGL 390
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ LE LY +M++ VP T T L+ CV R L ++ ++ G +
Sbjct: 391 SRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANT 450
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDR 481
+ ++ GLC G E+A ++ML + +Y ++ YL + N N LD
Sbjct: 451 QTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDL 510
Query: 482 MIKN 485
M +N
Sbjct: 511 MKEN 514
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 119/253 (47%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + T+ + A R + + + P+ T N L+ GF + G + + ++ EMV
Sbjct: 488 YNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMV 547
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ V+Y IDG+ K G A+ L E ME + C P++++ +I+G
Sbjct: 548 ECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFS 607
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A ++ D+M ++ L P++ Y +I L R A ++ +ME+++ + TY ++
Sbjct: 608 EAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLI 667
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+GL + + L M P T L+ F V R+D L ++D G
Sbjct: 668 YGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCK 727
Query: 420 PHGHALDLLVTGL 432
P+ +L+ GL
Sbjct: 728 PNYRTYSVLLKGL 740
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 15/241 (6%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PN ++ N ++ G + + E +M +G P+V+TY IDG C+ G A ++
Sbjct: 588 PNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKI 647
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F +ME+ CLP+L T ++LI+G +A L EM ++ L PD + ++I +
Sbjct: 648 FHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVV 707
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL--EGVCKLYDRMIEGKFVPKT 387
++ A L+ M + + TY + GL K L E V ++ + F P
Sbjct: 708 LGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVY--SFSPHE 765
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
+ VNF ++ NL + + G P LV+GLC +GR+ EA + K
Sbjct: 766 KD---------VNF--EIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814
Query: 448 M 448
M
Sbjct: 815 M 815
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 131/301 (43%), Gaps = 31/301 (10%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMS---IMLSRISKFQSY 155
P + ++ L + D+A L+ ++R P +T S+ ++L RI
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRID----- 712
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE---MKEARSVFVKLLSRFAPNN 212
AF + R + VG + ++VLL+ QKE ++E +V + + F+P+
Sbjct: 713 ----HAFLLLRRMVDVGCKP-NYRTYSVLLKGL--QKECLLLEEKVAVQHEAVYSFSPHE 765
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K +N F+ ++ A M G P++ TY+ + G C+KG F +A +L ++
Sbjct: 766 KDVN-----FEIVSNLLA------RMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKD 814
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ P + +L+ + A ++F + + + + Y A+I +L +
Sbjct: 815 MKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQ 874
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A L D M EK D + + + GL+K L+ KL M F P +T V+
Sbjct: 875 VEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVI 934
Query: 393 L 393
L
Sbjct: 935 L 935
>gi|6721172|gb|AAF26800.1|AC016829_24 hypothetical protein [Arabidopsis thaliana]
Length = 572
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 141/297 (47%), Gaps = 10/297 (3%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
LS LV +L R + L L++ + H H + DA++ + IL + + +D+
Sbjct: 149 LSDGLVHKLLHRFRDDWRSALGILKWAESCKGHKH---SSDAYDMAVDILGKAKKWDRMK 205
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
E + ++ L+TL +++ ++ R + +EE + FDR+ G+ K +E N+
Sbjct: 206 EFVERMRGD--KLVTLNTVAKIMRRFAGAGEWEEAVGIFDRLGE---FGLEK-NTESMNL 259
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C +K +++AR V ++L S PN T NI + G+ ++ V EM GF
Sbjct: 260 LLDTLCKEKRVEQARVVLLQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGF 319
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
RP V++Y I YC++ F + EME P+ T TT++ + +A +
Sbjct: 320 RPCVISYTTIIRCYCQQFEFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALR 379
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
+ M + KPD YN +I +L R L A + EM E + + TY++M
Sbjct: 380 VATRMKRSGCKPDSLFYNCLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 436
>gi|147843358|emb|CAN80524.1| hypothetical protein VITISV_030537 [Vitis vinifera]
Length = 714
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 107/429 (24%), Positives = 189/429 (44%), Gaps = 48/429 (11%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL----------KALEFFKFTLQ 95
P Q L+ T + P T ++T+VE F +H + + +ALE F +
Sbjct: 96 PLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAE 155
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI-MLSRISKFQS 154
F+ + LH LA+ + F QA + + H Q T+ + + + + ++ SK
Sbjct: 156 QRGFSHNNATYATILHKLAKSKKF-QAIDAVLH-QMTYETCKFHEGIFLNLMKHFSKLSL 213
Query: 155 YEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQ---------------AFCTQKEM 194
+E +E FD + E+ I S N+L++ AF +EM
Sbjct: 214 HERVVEMFDAIXPIVREKPSLKAI----STCLNLLVESNQSSITAKNGDIDSAFEVVEEM 269
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIR 253
K++ + PN T + L+ G SG + + EMV + P +TYN
Sbjct: 270 KKSHVSY--------PNLITYSTLINGLCGSGRLKEAIELFEEMVSKDQILPDALTYNAL 321
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+G+C A+++ E M++ C P++ + L++G + +A+++FDEM L
Sbjct: 322 INGFCHGXKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRLEEAKEVFDEMKSLGL 381
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
KPD Y +I+ R ++ AMEL+ +M E + D VT++ + GL + E
Sbjct: 382 KPDTVGYTTLINFFCRAGRVDEAMELLKDMXENKCRADTVTFNVILGGLCREGRFEEAXG 441
Query: 374 LYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+ +R+ EG ++ K ++L C + L G ++ RG PH + L+ L
Sbjct: 442 MLERLPYEGVYLNKASYRIVL-NSLCREGELQKATQLVGLMLGRGVLPHFATSNELLVHL 500
Query: 433 CSRGRWEEA 441
C G+ +A
Sbjct: 501 CEAGKVGDA 509
>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g12700, mitochondrial-like
[Glycine max]
Length = 555
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/300 (23%), Positives = 139/300 (46%), Gaps = 2/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C+ + +EA + ++ P++ T NIL+ + G + + + M+
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P +VTYN ++G+C +A LF M + P + LI+G + +
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVD 352
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF E+ +NL P++ YN++I L + ++ EL+DEM ++ D VTY+
Sbjct: 353 EAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFL 412
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
KS E L+ ++++G + P ++++ FC ++ + +L+ G C
Sbjct: 413 DAFCKSKPYEKAISLFRQIVQGIW-PDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCC 471
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ +++ LC ++EA +M ++ + L + N +K E L
Sbjct: 472 PNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKL 531
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 97/408 (23%), Positives = 175/408 (42%), Gaps = 14/408 (3%)
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSI 144
L F + +HP P F+K L + RM ++ A L S H + PS+ TL +
Sbjct: 41 LSFNRMLRKHP--PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL-- 96
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
I+ + AF + + +G + FN L+ FC + +A + + L
Sbjct: 97 ----INCYCHQAHLSFAFSLLGTILKMGFQP-NMVTFNTLINGFCINGMVSKAMAFRLDL 151
Query: 205 LSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P ++ + L+ G ++G +M RP+++TY+ IDG CK
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+RLF + L + +LIHG V +A +L M + N+ PD +N +
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ +L + + A + M ++ D VTY+ + G S+ + +L++RM++
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P +L+ +C VD + L+ + + P+ + L+ GLC GR E
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQE 391
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+M R + +Y + ++ EK L R I +Q + P
Sbjct: 392 LVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQI--VQGIWP 437
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 87/345 (25%), Positives = 149/345 (43%), Gaps = 32/345 (9%)
Query: 151 KFQSYEETLEAFDRMERE-----IFVGIRKFGS--------------------------E 179
KF + ++TL +F+RM R+ IFV + G+
Sbjct: 32 KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+L+ +C Q + A S+ +L F PN T N L+ GF +G V+ F ++
Sbjct: 92 TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +G+ +Y I+G CK G DA++L ++ME P+L T +T+I G R I
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +LF + R + D+ AYN++I A L+ M I D+ T++ +
Sbjct: 212 ADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNIL 271
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K + ++ M++ P T LM+ FC++ V L+ ++ RG
Sbjct: 272 VDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGL 331
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++L+ G C +EA K++ + + A+Y L
Sbjct: 332 EPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSL 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 113/254 (44%), Gaps = 13/254 (5%)
Query: 143 SIMLSRISK--FQSYEETLEAFD-----RMEREIFVGIRKFGSE----EFNVLLQAFCTQ 191
++M+ R K +Y +E F RE+F + K G E +NVL+ +C
Sbjct: 289 AVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKI 348
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ EA +F ++ + PN T N L+ G + G ++ ++ EM RG P +VTY
Sbjct: 349 DMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTY 408
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
NI +D +CK + A+ LF ++ + P ++ + A + +
Sbjct: 409 NIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLI 467
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
P++ Y MI++L + + AM L+ +M++ D VT+ T+ L + + +
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDK 527
Query: 371 VCKLYDRMIEGKFV 384
KL MIE V
Sbjct: 528 AEKLRLEMIERGLV 541
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 111/250 (44%), Gaps = 14/250 (5%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L F +N +A E F ++ P + ++ ++ D+A L ++
Sbjct: 304 NALMEGFCLSNNVSEARELFNRMVKR-GLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIR 362
Query: 131 RTH--PSLLTLKSMSIMLSRISKFQSYEETL-EAFDRMEREIFVGIRKFGSEEFNVLLQA 187
+ P+L T S+ L ++ + +E + E DR + V +N+ L A
Sbjct: 363 CKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIV--------TYNIFLDA 414
Query: 188 FCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
FC K ++A S+F +++ P+ ++++ F + + E +++ G P+V
Sbjct: 415 FCKSKPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNV 474
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-IHQARQLFD 306
TY I I+ CK F +AM L +M+ C P T T+I GA RN +A +L
Sbjct: 475 RTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETII-GALQERNETDKAEKLRL 533
Query: 307 EMPKRNLKPD 316
EM +R L D
Sbjct: 534 EMIERGLVND 543
>gi|115447913|ref|NP_001047736.1| Os02g0679200 [Oryza sativa Japonica Group]
gi|50253128|dbj|BAD29374.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
sativa Japonica Group]
gi|113537267|dbj|BAF09650.1| Os02g0679200 [Oryza sativa Japonica Group]
Length = 491
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +A S+ L RF P+ T N L G+ D + MV
Sbjct: 168 FNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVE 227
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER-----VACLPSLQTITTLIHGAGLV 295
G P+ TYNI + G+ + G A F +M++ +C P + + TT++HG G+
Sbjct: 228 SGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVA 287
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +AR++FDEM K P + YNA+I + + ++ A+ + D M K + VTY
Sbjct: 288 GQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMRVKGYVPNVVTY 347
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ GL + ++ KL +RM G P +T +L+++ ++ GL+L+ +
Sbjct: 348 TVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSK 407
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEE 440
C P+ +++++ + R R E+
Sbjct: 408 GEECLPNQDTYNIIISAMFMRKRAED 433
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 46/224 (20%), Positives = 91/224 (40%), Gaps = 8/224 (3%)
Query: 266 AMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+RLF + R L +L+ R+ +A L + +R PD+ YN +
Sbjct: 148 AVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLA 206
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI----- 379
R +D + A++++ M E I TY+ + G ++ L + +M
Sbjct: 207 DGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK 266
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P + ++ V +++ ++ + G P + L+ +C +G E
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRM 482
+A M V+ + +Y +L R L A ++ L+ L+RM
Sbjct: 327 DAVTVFDGMRVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERM 370
>gi|225450630|ref|XP_002278172.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial [Vitis vinifera]
gi|296089757|emb|CBI39576.3| unnamed protein product [Vitis vinifera]
Length = 586
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 128/282 (45%), Gaps = 2/282 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L++A C + ++ A V ++ + F PN T +L G+ GD+ + E++
Sbjct: 245 NILVKALCKKNDIDAAIRVLEEMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILD 304
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG+ P TY I +DGYCKKG F DA+++ +EME P+ T +I + +
Sbjct: 305 RGWVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGE 364
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
L D+M ++ P +I L + A EL ++ +K DN T+
Sbjct: 365 VLNLLDDMLEKKYIPSSALCCRVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIH 424
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K + KL+D +G +P T T L+ C + LW ++++G P
Sbjct: 425 WLCKEGKVWEARKLFDEFEKGS-IPSTLTYNALIAGMCEGGELPEAARLWDNMVEKGCVP 483
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
+ ++L+ G C G E ++ML ++A+Y +
Sbjct: 484 NAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATYAI 525
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/349 (23%), Positives = 157/349 (44%), Gaps = 10/349 (2%)
Query: 97 PHFTPTPDAF--EKTLHILARMRYFDQAWELMSHVQRTHPSLL-TLKSMSIMLSRISKFQ 153
P P P ++ + +++R + D A ++ H + H + ++ M+ ++SK +
Sbjct: 90 PPIKPWPQRLSPKRVVSMISRQQNLDLALQIFDHAGKFHRNFAHNYETYLAMIEKLSKAR 149
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNN 212
++E ++ + K G F +++ + K A F+++ S P+
Sbjct: 150 AFEPMETLISQLHKSQI----KCGENLFITVIRNYGFAGRPKLAIRTFLRIPSFGLQPSV 205
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
++ N LL ++ + + + + G P+V T NI + CKK A+R+ E
Sbjct: 206 RSFNTLLNTLVQNKRFDLVHLMFKNCRKKFGIVPNVFTCNILVKALCKKNDIDAAIRVLE 265
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM + +P++ T TT++ G ++ AR++F E+ R PD Y ++ +
Sbjct: 266 EMPAMGFIPNVVTYTTILGGYVSKGDMVGARRVFGEILDRGWVPDPTTYTILMDGYCKKG 325
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A+++MDEMEE R+ ++VTY + K V L D M+E K++P +
Sbjct: 326 RFMDAVKVMDEMEENRVEPNDVTYGVIIEAYCKEKKSGEVLNLLDDMLEKKYIPSSALCC 385
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR-WE 439
++ C +V++ LW L+ + P L+ LC G+ WE
Sbjct: 386 RVIDMLCEEGKVEVACELWKKLLKKNCTPDNAITSTLIHWLCKEGKVWE 434
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 95/225 (42%), Gaps = 11/225 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYE 156
+ P P + + + F A ++M ++ R P+ +T +++ K +
Sbjct: 307 WVPDPTTYTILMDGYCKKGRFMDAVKVMDEMEENRVEPNDVTY---GVIIEAYCKEKKSG 363
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E L D M + ++ ++L C + +++ A ++ KLL + P+N
Sbjct: 364 EVLNLLDDMLEKKYIPSSALCCRVIDML----CEEGKVEVACELWKKLLKKNCTPDNAIT 419
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+ L+ + G V + E +G PS +TYN I G C+ G +A RL++ M
Sbjct: 420 STLIHWLCKEGKVWEARKLFDEFE-KGSIPSTLTYNALIAGMCEGGELPEAARLWDNMVE 478
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
C+P+ T LI G V N + ++ +EM P+ Y
Sbjct: 479 KGCVPNAFTYNMLIKGFCKVGNAREGIRVMEEMLDNGCLPNKATY 523
>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g12700, mitochondrial-like [Glycine max]
Length = 527
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/367 (23%), Positives = 168/367 (45%), Gaps = 10/367 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEE 157
TP F K + L +M+++ A L +Q P L TL + I+ F +
Sbjct: 7 TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNIL------INCFCHLGQ 60
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+F + + + +G + + N L++ C + E+K++ K++++ F + +
Sbjct: 61 MTFSFTVLGKILKLGYQP-NTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYA 119
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G + G+ + + R RP+VV YN IDG CK +A L+ EM+
Sbjct: 120 TLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P++ T +TLI+G L + +A L +EM +N+ P++ Y ++ +L + + A
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEA 239
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L+ M ++ + + V+Y+T+ G ++ +++ M++ P + +++
Sbjct: 240 KNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDR 299
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C + RVD +NL ++ + P+ L+ G C GR A + K+M R +
Sbjct: 300 LCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPAD 359
Query: 457 EASYRML 463
+Y L
Sbjct: 360 VVTYTSL 366
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 84/379 (22%), Positives = 171/379 (45%), Gaps = 12/379 (3%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQ--RTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
++ L+ L ++ A +L+ ++ T P+++ ++ + + K + E + +
Sbjct: 117 SYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTI---IDGLCKDKLVNEAYDLY 173
Query: 163 DRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLL 220
M+ R IF + + + L+ FC ++ EA + + +L PN T IL+
Sbjct: 174 SEMDARGIFPNVITYST-----LIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMD 228
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
+ G V + M G +P+VV+YN +DGYC G +A ++F M + P
Sbjct: 229 ALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNP 288
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ + +I + + +A L E+ +N+ P+ Y+++I + + +A++L+
Sbjct: 289 NVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLL 348
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + D VTY ++ L K+ L+ L+ +M E P T L+ C
Sbjct: 349 KEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKG 408
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
R L+ +L+ +G + +++++GLC G +EA +M ++
Sbjct: 409 GRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTF 468
Query: 461 RMLQRYLVQANANEKLEDL 479
++ R L + + N+K E L
Sbjct: 469 EIIIRSLFEKDQNDKAEKL 487
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 92/200 (46%), Gaps = 1/200 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C K + EA ++ ++L + PN T + L+ GF + G +T+ EM
Sbjct: 293 YNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMY 352
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG VVTY +D CK A LF +M+ P+ T T LI G
Sbjct: 353 HRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHK 412
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A++LF + + + ++ YN MIS L + L+ A+ + +MEE D VT+ +
Sbjct: 413 NAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIII 472
Query: 360 FGLMKSSGLEGVCKLYDRMI 379
L + + KL MI
Sbjct: 473 RSLFEKDQNDKAEKLLHEMI 492
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 90/209 (43%), Gaps = 5/209 (2%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S +IM+ R+ K + +E + RE+ + ++ L+ FC + A +
Sbjct: 292 SYNIMIDRLCKSKRVDEAMNLL----REVLHKNMVPNTVTYSSLIDGFCKLGRITSALDL 347
Query: 201 FVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ R P + T LL ++ ++ + +M RG +P+ TY IDG CK
Sbjct: 348 LKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCK 407
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G +A +LF+ + C ++ T +I G + +A + +M + PD
Sbjct: 408 GGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVT 467
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ +I SL + A +L+ EM K +
Sbjct: 468 FEIIIRSLFEKDQNDKAEKLLHEMIAKDL 496
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 108/254 (42%), Gaps = 9/254 (3%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M+L P ++ +N + K + A+ LF++M+ P L T+ LI+ +
Sbjct: 1 MLLVRDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQ 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ + + ++ K +P+ N ++ L ++ ++ D++ + D V+Y T
Sbjct: 61 MTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYAT 120
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K KL RMIE + P ++ C + V+ +L+ + R
Sbjct: 121 LLNGLCKIGETRSALKLL-RMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDAR 179
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P+ L+ G C G+ EAF +M+++ + +Y +L L +
Sbjct: 180 GIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCK------- 232
Query: 477 EDLDRMIKNLQAVL 490
E + KNL AV+
Sbjct: 233 EGKVKEAKNLLAVM 246
>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 123/260 (47%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L++ F K +++A V L S P+ N ++ GF + + A + M RGF
Sbjct: 109 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGF 168
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P +VTYNI I C + G A+++ +++ C+P++ T T LI + I++A +
Sbjct: 169 LPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 228
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L +EM R L PD+ YNA+I + + + +L+ EM + + VTY + L
Sbjct: 229 LLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLC 288
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ ++ + MIE + P T + L+ C R+DL + + Y+I G P
Sbjct: 289 RFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIV 348
Query: 424 ALDLLVTGLCSRGRWEEAFE 443
+ ++ LC G +A E
Sbjct: 349 NYNTILAALCKNGNANQALE 368
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 127/292 (43%), Gaps = 9/292 (3%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ-RTHPSLLTLKSMSIMLS 147
+F L + +TP K + + ++A +M ++ T P + ++ +S
Sbjct: 89 YFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAV---IS 145
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-S 206
K E + +RM+ F+ +N+++ + C ++++ A V +LL
Sbjct: 146 GFCKVNRIEAATQVLNRMKARGFLP----DIVTYNIMIGSLCNRRKLGLALKVLDQLLLD 201
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
P T IL+ G + EM+ RG P + TYN I G CK+G + +
Sbjct: 202 NCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEG 261
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+L EM C P+ T + LI I +A + M ++ L PD +Y+ +IS+
Sbjct: 262 EKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISA 321
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
L + L+ A+ +MD M D V Y+T+ L K+ ++++++
Sbjct: 322 LCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 373
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 110/228 (48%), Gaps = 2/228 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G F +++ E + P + T LI G +NI +A ++ E+ + + +PD+
Sbjct: 79 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+IS + + AA ++++ M+ + D VTY+ M L L K+ D+
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ +P T +L++ V ++ + L ++ RG P + + ++ G+C G
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRMIK 484
W+E + +M R + ++ +Y +L L + +E + L MI+
Sbjct: 258 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIE 305
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 105/239 (43%), Gaps = 1/239 (0%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P V YN I G+CK A ++ M+ LP + T +I R + A ++
Sbjct: 135 PDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKV 194
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
D++ N P + Y +I + I +N AM+L++EM + + D TY+ + G+ K
Sbjct: 195 LDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCK 254
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ KL M P T +L+ C R+D +++ +I++ P ++
Sbjct: 255 EGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYS 314
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRM 482
D L++ LC GR + A M+ +Y + L + NAN+ LE +++
Sbjct: 315 YDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 373
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/139 (21%), Positives = 59/139 (42%), Gaps = 1/139 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + E + ++ SR PN T +IL+ G + M+
Sbjct: 245 YNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 304
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +Y+ I CK+G A+ + + M CLP + T++ N +
Sbjct: 305 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 364
Query: 300 QARQLFDEMPKRNLKPDIG 318
QA ++F+++ P+ G
Sbjct: 365 QALEIFNKLRGMGCPPNDG 383
>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
Length = 695
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 152/329 (46%), Gaps = 4/329 (1%)
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
LEA R+ ++ RK +NVLL C M E R++ ++ S P+ T +I
Sbjct: 246 LEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSI 305
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L G +GD M + E + +G T +I ++G CK G A ++ E +
Sbjct: 306 LFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 365
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P+ TLI+G VR++ A +F++M R+++PD YNA+I+ L + + A
Sbjct: 366 LVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAE 425
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L+ EME+ + T++T+ ++ LE + M + + ++K F
Sbjct: 426 DLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAF 485
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C N ++ + + +I + P+ + ++ G E+AF ++M S
Sbjct: 486 CKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASI 545
Query: 458 ASYRMLQRYLVQANANEKLEDLDRMIKNL 486
+Y +L + L + N ++++ + +I NL
Sbjct: 546 FTYNLLLKGLCK---NSQIDEAEELIYNL 571
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/274 (22%), Positives = 127/274 (46%), Gaps = 1/274 (0%)
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMF 234
G+ ++LL C ++ +A V L+ + P N L+ G+ + D+
Sbjct: 333 IGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSI 392
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +M R RP +TYN I+G CK +A L EME+ PS++T TLI G
Sbjct: 393 FEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGR 452
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ + + +M + +K ++ ++ +++ + + + A+ ++D+M K + +
Sbjct: 453 AGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQV 512
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+++ ++S G E L ++M T +L+K C N ++D L L
Sbjct: 513 YNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLT 572
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++G P + + +++ C++G + A E ++M
Sbjct: 573 NQGLRPDVVSYNTIISACCNKGDTDRALELLQEM 606
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 129/301 (42%), Gaps = 3/301 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVT-AMEMFYHEMV 239
N+LL++ + + R+ F L++ A P+ N + +GD+ A+ M
Sbjct: 127 NLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAMLRRMGR 186
Query: 240 LRGFRP-SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P +YN+ I G + G DA+++F+EM P+ T T+I G ++
Sbjct: 187 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDL 246
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+L D+M + KP++ YN ++S L R ++ LMDEM + D TY +
Sbjct: 247 EAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSIL 306
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
F GL ++ + L+ ++ + T +L+ C + +V + L+ G
Sbjct: 307 FDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 366
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P + L+ G C + AF +QM R + +Y L L + + ED
Sbjct: 367 VPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAED 426
Query: 479 L 479
L
Sbjct: 427 L 427
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 134/316 (42%), Gaps = 7/316 (2%)
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
L +L S +++L + + + AF + + G R + +N +QA ++
Sbjct: 120 LPSLSSCNLLLESLLSVGRHADVRAAFGLL---VAAGARP-DTFAWNKAVQACVAAGDLD 175
Query: 196 EARSVFVKL-LSRFAP--NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
EA ++ ++ S AP + + N+++ G SG + + EMV RG P+ +TYN
Sbjct: 176 EALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNT 235
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
IDG+ K G RL ++M + P++ T L+ G + + R L DEM +
Sbjct: 236 MIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYS 295
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ PD Y+ + L R D + L E +K + T + GL K +
Sbjct: 296 MLPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAE 355
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++ + ++ VP T L+ +C + +++ + R P + L+ GL
Sbjct: 356 QVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGL 415
Query: 433 CSRGRWEEAFECSKQM 448
C EA + +M
Sbjct: 416 CKMEMITEAEDLVMEM 431
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/338 (21%), Positives = 136/338 (40%), Gaps = 52/338 (15%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+L+ L T + +T + N L + + A F+ ++ H P + ++ L
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFE-QMKSRHIRPDHITYNALINGL 415
Query: 114 ARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+M +A +L+ ++++ PS+ T ++ R + + L D ++ I
Sbjct: 416 CKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLS--DMQDKGIKS 473
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-- 228
+ FGS +++AFC ++ EA ++ ++ + PN + N ++ + ESG
Sbjct: 474 NVISFGS-----VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQ 528
Query: 229 ------------TAMEMFYHEMVLRGF---------------------RPSVVTYNIRID 255
+ +F + ++L+G RP VV+YN I
Sbjct: 529 AFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIIS 588
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
C KG A+ L +EM + P+L+T L+ G +H L+ M +N++P
Sbjct: 589 ACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEP 648
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
Y RC + + L EM EK I D+
Sbjct: 649 SSSIYGT------RCENESKVASLKKEMSEKGIAFDDT 680
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/297 (21%), Positives = 127/297 (42%), Gaps = 10/297 (3%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISK 151
L H PT + ++ ++R A+ + ++ H P +T ++ ++ + K
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNAL---INGLCK 417
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN 211
+ E + ME+ G+ E FN L+ A+ ++++ +V + + +
Sbjct: 418 MEMITEAEDLVMEMEKS---GVDP-SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKS 473
Query: 212 NK-TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
N + ++ F ++G + +M+ + P+ YN ID Y + G A L
Sbjct: 474 NVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLV 533
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
E+M+ S+ T L+ G I +A +L + + L+PD+ +YN +IS+
Sbjct: 534 EKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNK 593
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
D + A+EL+ EM + I TYH + L + + + LY M+ P +
Sbjct: 594 GDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQHMVHKNVEPSS 650
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/259 (22%), Positives = 101/259 (38%), Gaps = 36/259 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ +C ++++ A S+F ++ SR P++ T N L+ G + +T E EM
Sbjct: 373 YNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEME 432
Query: 240 LRGFRPSVVTYNIRIDGY-----------------------------------CKKGCFG 264
G PSV T+N ID Y CK G
Sbjct: 433 KSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIP 492
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ + ++M +P+ Q ++I QA L ++M + I YN ++
Sbjct: 493 EAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLL 552
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A EL+ + + + D V+Y+T+ + +L M +
Sbjct: 553 KGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIR 612
Query: 385 PKTRTVVMLMKFFCVNFRV 403
P RT L+ RV
Sbjct: 613 PTLRTYHPLLSALGSAGRV 631
>gi|147772266|emb|CAN67349.1| hypothetical protein VITISV_018089 [Vitis vinifera]
Length = 483
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/269 (28%), Positives = 126/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+++ AFC ++++A VF K+ + F+P + N L+ G+ G + + M
Sbjct: 184 LNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSGMKLKILME 243
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G RP VT+N I+G+C+ G +A ++F EM+ +P+ T TLI+G V N
Sbjct: 244 KNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSE 303
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+L DEM + +K DI YNA+I L A L+ E++ + + ++ T+ +
Sbjct: 304 MGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALI 363
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G E +LY MI P T ML+ FC N D + + + +R
Sbjct: 364 TGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIA 423
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P L L GL G+ E A + K+M
Sbjct: 424 PDSDTLSELCRGLWLSGKEELALKLCKEM 452
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 110/245 (44%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R +PN T+N+++ F + G + + +M GF P++ +YN I GYC KG
Sbjct: 176 RISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGLLNSG 235
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
M+L ME+ P T TLI+G +H+A ++F EM ++ P+ YN +I+
Sbjct: 236 MKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLING 295
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+ + L DEM I D +TY+ + GL + L + VP
Sbjct: 296 YSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPN 355
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ T L+ CV + L+ +I G P+ H +L++ C ++ A E +
Sbjct: 356 SSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVR 415
Query: 447 QMLVR 451
+M R
Sbjct: 416 EMSER 420
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 101/207 (48%), Gaps = 1/207 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ FC ++ EA +F ++ + PN T N L+ G+ + G+ + EM+
Sbjct: 254 FNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNTLINGYSQVGNSEMGGRLHDEML 313
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + ++TYN I G C +G A L +E++R +P+ T + LI G + +N
Sbjct: 314 RNGIKADILTYNALILGLCMEGRTKKAAYLVKELDRENLVPNSSTFSALITGQCVRKNSE 373
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QL+ M + P+ + +IS+ + D + A+E++ EM E+ I D+ T +
Sbjct: 374 RAFQLYKSMIRSGCHPNYHTFKMLISTFCKNEDFDGAVEVVREMSERSIAPDSDTLSELC 433
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPK 386
GL S E KL M +P+
Sbjct: 434 RGLWLSGKEELALKLCKEMEMKHLMPE 460
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 126/286 (44%), Gaps = 5/286 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK--ESGDVTAMEMFYHE 237
F+ L + + K+++ A VF ++ F P ++ N + + GD+ FY E
Sbjct: 114 FDSLFKTYAQMKKLRNAIDVFCQMKDYGFLPRVESCNAYISASISLQRGDIALT--FYRE 171
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M P+V T N+ + +CK G A+ +F++ME + P++ + TLI G
Sbjct: 172 MQRYRISPNVYTLNMVMCAFCKWGKLEKAIEVFKKMETMGFSPTITSYNTLIAGYCNKGL 231
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
++ +L M K ++PD +N +I+ R L+ A ++ EM+ + + +TY+T
Sbjct: 232 LNSGMKLKILMEKNGVRPDDVTFNTLINGFCRGGKLHEANKIFSEMKANDVVPNTITYNT 291
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G + E +L+D M+ T L+ C+ R L L
Sbjct: 292 LINGYSQVGNSEMGGRLHDEMLRNGIKADILTYNALILGLCMEGRTKKAAYLVKELDREN 351
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ L+TG C R E AF+ K M+ + +++ML
Sbjct: 352 LVPNSSTFSALITGQCVRKNSERAFQLYKSMIRSGCHPNYHTFKML 397
>gi|116787233|gb|ABK24422.1| unknown [Picea sitchensis]
Length = 504
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 96/435 (22%), Positives = 191/435 (43%), Gaps = 19/435 (4%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S VE+VL + A G++A++FF++ +P A+ + +L + FD W
Sbjct: 76 VSIKFVEDVLKLSYGA---GMEAMKFFRWAGLKLSSKHSPLAWNLLVDLLGSDKLFDAMW 132
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ + ++ + +++ +++S + + +E F+ ME+ G R+ N
Sbjct: 133 DCIKIMK--NQGIVSTETLSSVFGNYVQAGKVDEARMTFEVMEQ---YGCRQ-DVVALNC 186
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-G 242
+ A C K++K A F + R AP+ T +LL G++ G+V+ + EM+ R G
Sbjct: 187 YISALCRYKQVKAALEFFDSVKERIAPDADTYALLLEGWEIEGNVSNARSTFGEMIARLG 246
Query: 243 FRPSVVT-YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL----QTITTLIHGAGLVR- 296
+ P+ + YN + +A++ M+ CLP L T+ L +
Sbjct: 247 WMPNNTSAYNAFLSTLVNGFQVDEALKYLGVMKTKKCLPDLGFFRNTLQILYQRKAMKEP 306
Query: 297 -NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR--DLNAAMELMDEMEEKRIGHDNV 353
+ Q L++ M + + PD+ YN MI +N+A L+DEM D+
Sbjct: 307 YGLWQLMSLWEFMRQSGIVPDLPTYNTMIGVCCSANPIQVNSAYSLLDEMALTGAFPDSK 366
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+F + + +E ++ M + +F P VM +K + ++ + +W ++
Sbjct: 367 TYNTIFEAFITARKVEEASSIFREMTKNEFCPLYANYVMAIKMYFEADDSEMAVMMWRHM 426
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I + P +L+ G GR A + S + + R Q+ + L+ +Q
Sbjct: 427 IQKAIFPKSDCAAILIDGFLDLGRVSAALKYSLEAITRGVQIPVETMIKLKNASIQTGKQ 486
Query: 474 EKLEDLDRMIKNLQA 488
+ L+ +K+ +
Sbjct: 487 DAYGQLEIKMKSFSS 501
>gi|242058297|ref|XP_002458294.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
gi|241930269|gb|EES03414.1| hypothetical protein SORBIDRAFT_03g030760 [Sorghum bicolor]
Length = 534
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 110/436 (25%), Positives = 179/436 (41%), Gaps = 29/436 (6%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH-----FTPTPDAFEKTLHIL 113
P TL + L RL A + +AL F TP+P L
Sbjct: 6 PTPPKWPKTLTADHLHRLVRAERDPRRALAIFDAATAASTSAPDPITPSPATVSLLTSRL 65
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR-ISKFQSYEETLEAFDRMEREIFVG 172
A + A L+S + PS+ L+ + L R S+ L F ++ +
Sbjct: 66 ASAGHLPLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLAL- 124
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAM 231
+ +N +L A + ARS+ + + FAP T N+LL K A
Sbjct: 125 --PHSARSYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLL---KAQCSDAAA 179
Query: 232 EMFYHEMVLRGFR----PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
++ + LR FR P V +YN IDG C++G A+ +F EM P++ T TT
Sbjct: 180 DI---KDALRLFRNIPKPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTT 236
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LIH A ++FDEM +R + P++ Y+++I L + +A+ELMD M +++
Sbjct: 237 LIHWLAREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEK 296
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ +TY ++ GL K L ++ DRM ++G+ P L+ C R
Sbjct: 297 KLPNTITYSSVIDGLCKEHMLSEAMEVLDRMRLQGR-KPDAGLFGKLIVGLCDAGRAVEA 355
Query: 407 LNLWGYLIDRGFCP-------HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
N +I G P H + ++T LC++G AF+ + R +
Sbjct: 356 ANYLDEMILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTT 415
Query: 460 YRMLQRYLVQANANEK 475
+ +L + EK
Sbjct: 416 FHLLVESFSKKKNMEK 431
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/397 (20%), Positives = 145/397 (36%), Gaps = 58/397 (14%)
Query: 49 PLHPTLLQHLPQTTPLSSTLVENVLG--RLFAAHSNGLKALEFFKFT---LQHPHFTPTP 103
PL +LL P + L LG R F+ L AL F+ L PH +
Sbjct: 72 PLATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLALPH---SA 128
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
++ L L + A L++ + R T + +++L K Q + + D
Sbjct: 129 RSYNAVLAALVAHSHLPLARSLLADM-RAAGFAPTAATYNVLL----KAQCSDAAADIKD 183
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF 222
+ +F I K +N ++ C + + A +F +++ + AP T L+
Sbjct: 184 ALR--LFRNIPKPDVCSYNTIIDGLCRRGRLAAALEMFSEMVGKCIAPTVVTYTTLIHWL 241
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
G + EM RG P++VTY+ IDG CK G A+ L + M + LP+
Sbjct: 242 AREGCFDDALKIFDEMGRRGVSPNLVTYSSLIDGLCKGGRAASALELMDRMIKEKKLPNT 301
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +++I G + +A ++ D M + KPD G + +I L A +DE
Sbjct: 302 ITYSSVIDGLCKEHMLSEAMEVLDRMRLQGRKPDAGLFGKLIVGLCDAGRAVEAANYLDE 361
Query: 343 M------------------------------------------EEKRIGHDNVTYHTMFF 360
M + I D T+H +
Sbjct: 362 MILAGIEPNRVTWSLHTRINNTVLTALCAKGELGRAFQVYQSTRTRSISTDPTTFHLLVE 421
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
K +E + M+ + +P+ T +++ +
Sbjct: 422 SFSKKKNMEKAAHVVLDMLSERCIPERETWDVIISGY 458
>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 122/252 (48%), Gaps = 3/252 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
F+ L+ F + + +A V+ + + +F P+N +L+ G+ +G++ EM
Sbjct: 109 FSSLMAVFSRNRHLDQAL-VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEM 167
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +G V+ YN ++G CK+ DA +LF+EM LP T TTLIHG N+
Sbjct: 168 LEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNM 227
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A LF M +RN+KPDI AYN +I + ++ A EL D M ++I +++TY +
Sbjct: 228 TKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGIL 287
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ +L+D MIE P T ++K +C + G +I +G
Sbjct: 288 INAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGV 347
Query: 419 CPHGHALDLLVT 430
P + + L+
Sbjct: 348 APDHISYNTLIN 359
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 81/352 (23%), Positives = 157/352 (44%), Gaps = 18/352 (5%)
Query: 119 FDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
++A+E+M+ + + PSL T ++ L + ++ + I + +
Sbjct: 17 LEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYAR-----------AKGILIEMLNI 65
Query: 177 G----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
G + +N LL C + EA+ +F ++L + P+ + + L+ F + +
Sbjct: 66 GLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQA 125
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
+++ +M G P V Y + + GYC+ G +A+++ +EM C+ + T+++G
Sbjct: 126 LVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 185
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+ + A +LFDEM +R PD + +I + ++ A+ L M ++ I D
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
V Y+T+ G K +E +L+D MI K P T +L+ +C V LW
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+I++G P + ++ G C G +A E +M+ + SY L
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTL 357
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 141/306 (46%), Gaps = 2/306 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ A+C + ++EA + + + P+ T N ++ G + G + EM+
Sbjct: 4 YNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEML 63
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P TYN + C++ F +A +F EM R +P L + ++L+ R++
Sbjct: 64 NIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLD 123
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA F +M K L PD Y ++ R ++ A+++ DEM E+ D + Y+T+
Sbjct: 124 QALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTIL 183
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L KL+D M+E +P T L+ C + + L+L+G + R
Sbjct: 184 NGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIK 243
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLED 478
P A + L+ G C G E+A E M+ R+ + +Y +L Y + +E
Sbjct: 244 PDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 303
Query: 479 LDRMIK 484
D MI+
Sbjct: 304 WDVMIE 309
>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
Length = 559
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 135/280 (48%), Gaps = 15/280 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C +K +++A + V++ S PN+ T IL+ G + G V EM
Sbjct: 13 YNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLGEMK 72
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVR 296
+G VV Y+ I G+C KGC LF+EM P++ + LI+G GL R
Sbjct: 73 RKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKGLWR 132
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVT 354
+A + M +R ++PD+ Y MI L C+D A A++L D M EK VT
Sbjct: 133 ---EATAVLHTMTERGIQPDVYTYTCMIGGL--CKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y+ + GL K + K+++ M+E GK + ++M C N ++D + L+ L
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGL-CNNGKLDEAMKLFSSL 246
Query: 414 IDRG--FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++ G P + ++ GLC GR ++A E M+ R
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIER 286
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/258 (28%), Positives = 129/258 (50%), Gaps = 7/258 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVT-AMEMF--YH 236
FN ++Q C + + +A ++ ++ R + N T +IL+ + +SG + AME++ H
Sbjct: 260 FNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRVH 319
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
++ G PS TY++ IDG+CK A LF M+ P+L TL+
Sbjct: 320 KL---GLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASLCKES 376
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
++ QAR+LF EM + N +PD ++N MI ++ D+++A EL+++M++ + D TY
Sbjct: 377 SLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYS 436
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ L K +E +D MI P L+K F +N ++ +NL + D
Sbjct: 437 SFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADM 496
Query: 417 GFCPHGHALDLLVTGLCS 434
G + ++T LC+
Sbjct: 497 GVILDLEITNSILTFLCN 514
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 131/275 (47%), Gaps = 11/275 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI-----LLLGFKESGDVTAMEMFY 235
+ +L+ C + ++EA ++LL +++ L+ GF G + + +
Sbjct: 48 YCILMDGLCKEGRVEEA----MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALF 103
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM+ +G P+VV Y+ I+G+CKKG + +A + M P + T T +I G
Sbjct: 104 DEMLEKGISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKD 163
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+A LFD M ++ +P YN +I+ L + + A ++ + M EK + V+Y
Sbjct: 164 GRARKALDLFDLMTEKGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSY 223
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIE-GKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+T+ GL + L+ KL+ ++E G +V P T +++ C R+D + ++ +
Sbjct: 224 NTLIMGLCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTM 283
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
I+RG + +L+ G ++A E K++
Sbjct: 284 IERGSFGNLFTCHILIGEYIKSGIIDKAMELWKRV 318
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 110/242 (45%), Gaps = 3/242 (1%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P +V+YN I+G CK+ A+ L EME +C P+ T L+ G + +A +L
Sbjct: 8 PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
EM ++ L+ D+ Y+ +IS L+ L DEM EK I + V Y + G K
Sbjct: 68 LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ M E P T ++ C + R L+L+ + ++G P
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
++L+ GLC G +AF+ + ML + +++ SY L L N KL++ ++
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCN---NGKLDEAMKLFS 244
Query: 485 NL 486
+L
Sbjct: 245 SL 246
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/361 (23%), Positives = 150/361 (41%), Gaps = 30/361 (8%)
Query: 103 PDAFEKTLHILA-----RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK------ 151
PD + T I R R ++LM+ + PS +T +++++ + K
Sbjct: 148 PDVYTYTCMIGGLCKDGRARKALDLFDLMTE-KGEEPSTVTY---NVLINGLCKEGCIGD 203
Query: 152 -FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL---SR 207
F+ +E LE R+E +N L+ C ++ EA +F LL +
Sbjct: 204 AFKIFETMLEKGKRLE-----------VVSYNTLIMGLCNNGKLDEAMKLFSSLLEDGNY 252
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ T N ++ G + G + Y M+ RG ++ T +I I Y K G AM
Sbjct: 253 VEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIIDKAM 312
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L++ + ++ +PS T + +I G + ++ A+ LF M L P + YN +++SL
Sbjct: 313 ELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLMASL 372
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ L A L EM+E D ++++ M G +K+ + +L + M + P
Sbjct: 373 CKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDA 432
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T + +++ + +I G P H D L+ G EE +Q
Sbjct: 433 YTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQ 492
Query: 448 M 448
M
Sbjct: 493 M 493
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 85/197 (43%)
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+R+ LP + + T+I+G + + +A L EM + +P+ Y ++ L +
Sbjct: 1 MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ AM L+ EM+ K + D V Y T+ G L+ L+D M+E P
Sbjct: 61 VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ FC + + +RG P + ++ GLC GR +A + M +
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180
Query: 453 RQVSEASYRMLQRYLVQ 469
+ S +Y +L L +
Sbjct: 181 EEPSTVTYNVLINGLCK 197
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 119/289 (41%), Gaps = 23/289 (7%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILA----RMRYFDQAWELMSHVQRTH--PSLLT 138
KA+E + ++ F + F T HIL + D+A EL V + PS T
Sbjct: 275 KAVEIYDTMIERGSF---GNLF--TCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTT 329
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKE 196
S+M+ K F RM+ I ++N L+ + C + +++
Sbjct: 330 Y---SVMIDGFCKMHMLNFAKGLFSRMK------ISGLSPTLFDYNTLMASLCKESSLEQ 380
Query: 197 ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR +F ++ S P+ + NI++ G ++GD+ + + ++M G P TY+ I+
Sbjct: 381 ARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLTPDAYTYSSFIN 440
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
K G +A F+ M P +LI G GL I + L +M +
Sbjct: 441 RLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINLLRQMADMGVIL 500
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
D+ N++++ L + MEL+ + G +++ + + K
Sbjct: 501 DLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISCDKLLMKIQK 549
>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
Length = 1001
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 157/330 (47%), Gaps = 5/330 (1%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
+ EAF+ I GI +N L+ C E K ++ +++ S+ P+ T+
Sbjct: 165 QVTEAFNIFSEMITKGISP-NIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 223
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N ++ + G V M+ RG P+VVTYN +DG+C + A+++F+ M
Sbjct: 224 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 283
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C+ ++ + TLI+G ++++ +A LF+EM ++ L P+ YN +I L L
Sbjct: 284 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 343
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLM 394
A+ L EM + D VTY T+ L K+ L+ L + IEG + P + ++
Sbjct: 344 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALL-KAIEGSNWDPDIQIYTTIL 402
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ +L+ L +G P+ ++++ GLC +G EA + +M
Sbjct: 403 DGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCS 462
Query: 455 VSEASYRMLQRYLVQAN-ANEKLEDLDRMI 483
++ +Y ++ R ++ N A +E L+ M+
Sbjct: 463 PNDCTYNLITRGFLRNNEALRTIELLEEML 492
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
Query: 183 VLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
+++ + C + A S K+L P+ T L+ G G + + +M+
Sbjct: 85 IVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGE 144
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF+P+VVTY I+G CK +A +F EM P++ T +LIHG +
Sbjct: 145 GFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHV 204
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
L +EM + PD+ N ++ +L + + A +++D M + + + VTY+ + G
Sbjct: 205 TTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDG 264
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ ++ K++D M+ V + L+ +C VD + L+ + + P+
Sbjct: 265 HCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPN 324
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
+ L+ GLC GR ++A +M+ R + +YR L YL K LD+
Sbjct: 325 TVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLC------KNRHLDK 378
Query: 482 MIKNLQAV 489
+ L+A+
Sbjct: 379 AMALLKAI 386
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/386 (23%), Positives = 161/386 (41%), Gaps = 14/386 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P + ++ L + R +A+ + S + + P+++T S+ L ++ +++
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 157 ETL-EAFD-RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+ E D ++ ++F N ++ A C + + EA V ++ R PN
Sbjct: 206 TLMNEMVDSKIMPDVFT---------LNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVV 256
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G +V + MV + +V++YN I+GYCK AM LFEEM
Sbjct: 257 TYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 316
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
R P+ T TLIHG V + A LF EM R PD+ Y + L + R L
Sbjct: 317 SRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHL 376
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ AM L+ +E D Y T+ G+ ++ LE L+ + P T ++
Sbjct: 377 DKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIM 436
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ C + L+ + G P+ +L+ G E ++ML R
Sbjct: 437 IHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGF 496
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL 479
V ++ +L L ++ ++ +
Sbjct: 497 SVDVSTTTLLVGMLSDDGLDQSVKQI 522
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/388 (22%), Positives = 159/388 (40%), Gaps = 63/388 (16%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A + + HP T+ + +L+ I+K + Y L +M+ GI
Sbjct: 562 LDDALSSFNRMLHMHPPPSTV-DFTKLLTSIAKMKHYSTVLSLSTQMDS---FGIPP-DV 616
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKE------SGDVTAM 231
N+L+ +FC + + A SV KLL F P+ T L+ G + S D+
Sbjct: 617 YTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTY 676
Query: 232 EMFYH----------------EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
H EMV P+VV ++ +D CK+G A + + M +
Sbjct: 677 NSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIK 736
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T T L+ G L + +A ++FD M + P++ +YN +I+ + + ++
Sbjct: 737 RGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDK 796
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AM L+++M + + D VTY+T+ GL L+ L+ M+ +P T +L+
Sbjct: 797 AMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLD 856
Query: 396 FFCVNF---------------RVDLGLNLWGYLID--------------------RGFCP 420
+ C N +D + ++ ID +G P
Sbjct: 857 YLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQP 916
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
++++ GLC RG +EA + ++M
Sbjct: 917 DVRTYNIMIHGLCKRGLLDEANKLFRKM 944
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 91/204 (44%), Gaps = 1/204 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + EM EA VF ++ + PN ++ NIL+ G+ + + +M
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G VTYN I G C G A+ LF EM +P L T L+ ++
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L + NL DI YN I + R +L AA +L + K + D TY+ M
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKF 383
GL K L+ KL+ +M E
Sbjct: 926 HGLCKRGLLDEANKLFRKMDENDI 949
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 124/289 (42%), Gaps = 7/289 (2%)
Query: 194 MKEARSVFVKLLSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA S F ++L + P + N LL ++ + + +M G P V T I
Sbjct: 26 LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I+ C A ++ ++ P T TTLI G + I +A LFD+M
Sbjct: 86 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+P++ Y +I+ L + R + A + EM K I + VTY+++ GL K + V
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L + M++ K +P T+ ++ C V ++ +I RG P+ + L+ G
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
C R + A + M+ + + SY L N K++ +D+
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTL------INGYCKIQSVDK 308
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/340 (22%), Positives = 146/340 (42%), Gaps = 18/340 (5%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R+ P L S + + SR F + ++ L +F+RM + +F LL +
Sbjct: 538 RSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH----PPPSTVDFTKLLTSIAK 593
Query: 191 QKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
K S+ ++ S P+ T+NIL+ F + +++ GF+P VVT
Sbjct: 594 MKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVT 653
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y ++G CK G + P + T +LIH + L +EM
Sbjct: 654 YGTLMNGLCKMITKGIS-------------PDIFTYNSLIHALCNLCEWKHVTTLLNEMV 700
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ P++ ++ ++ +L + + A +++D M ++ + D VTY + G S ++
Sbjct: 701 NSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMD 760
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
K++D M+ VP R+ +L+ +C R+D + L + +G + L+
Sbjct: 761 EAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLI 820
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
GLC GR + A +M+ + +YR+L YL +
Sbjct: 821 HGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCK 860
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 86/194 (44%), Gaps = 5/194 (2%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKT 214
+E ++ FD M + V +N+L+ +C + M +A + ++ L + T
Sbjct: 760 DEAVKVFDTMVHKGCVP----NVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVT 815
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G G + +HEMV G P +VTY I +D CK +AM L + +E
Sbjct: 816 YNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIE 875
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ I G + AR LF + + L+PD+ YN MI L + L+
Sbjct: 876 GSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLD 935
Query: 335 AAMELMDEMEEKRI 348
A +L +M+E I
Sbjct: 936 EANKLFRKMDENDI 949
>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
Length = 592
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 138/300 (46%), Gaps = 1/300 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L++ F K +++A V L S P+ N ++ GF + + A + M RGF
Sbjct: 119 LIKGFFNFKNIEKASRVMEILESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGF 178
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P +VTYNI I C + G A+ + +++ C+P++ T T LI + I++A +
Sbjct: 179 LPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMK 238
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L +EM R L PD+ YNA+I + + + A EL+ + K D ++Y+ + +
Sbjct: 239 LLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFL 298
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ KL M P T +L+ C R+D +++ +I++ P +
Sbjct: 299 NQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTY 358
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRM 482
+ D L++ LC GR + A M+ +Y + L + NAN+ LE +++
Sbjct: 359 SYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKL 418
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 135/286 (47%), Gaps = 2/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL+AF Q + E + ++ SR PN T +IL+ G + M+
Sbjct: 290 YNILLRAFLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMI 349
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +Y+ I CK+G A+ + + M CLP + T++ N +
Sbjct: 350 EKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNAN 409
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QA ++F+++ P++ +YN MIS+L C D + A+ ++ M K I D +TY+++
Sbjct: 410 QALEIFNKLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLI 469
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L D M + F P + +++ C R+D + ++ +I++G
Sbjct: 470 SCLCRDGLVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCR 529
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ LL+ G+ G EA E + L R +S+ S++ L +
Sbjct: 530 PNETTYILLIEGIGFAGWRTEAMELANS-LFSRDVISQDSFKRLNK 574
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 102/218 (46%), Gaps = 2/218 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK G F +++ E + P + T LI G +NI +A ++ E+ + + +PD+
Sbjct: 89 CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 147
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+IS + + AA ++++ M+ + D VTY+ M L L + D+
Sbjct: 148 FAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALTVLDQ 207
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ +P T +L++ V ++ + L ++ RG P + + ++ G+C G
Sbjct: 208 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 267
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANE 474
E A E + + + SY +L R +L Q +E
Sbjct: 268 VERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDE 305
>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
Length = 738
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 100/421 (23%), Positives = 182/421 (43%), Gaps = 39/421 (9%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LL+ LP ++ V V G AH + A + F L H H P AF K LH L
Sbjct: 145 LLRALPHRGAVAYCTV--VCG--LYAHGHTHDARQLFDQML-HTHVFPNLAAFNKVLHAL 199
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD---------- 163
+ +A L+ V + S+ L + +I + + + E + D
Sbjct: 200 CKRGDVLEAGLLLGKVIQRGMSI-NLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAVPDV 258
Query: 164 -------------RMEREIFVGIRKFGSE-------EFNVLLQAFCTQKEMKEARSVFVK 203
M +E +R+ ++ +N ++ +C ++EA +
Sbjct: 259 VTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKD 318
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + F P+ T L+ G GDV A+E+F +E +G +P +V YN + G C +G
Sbjct: 319 AVFKGFVPDQVTYCSLINGLCAEGDVERALELF-NEAQAKGIKPDIVVYNSLVKGLCLQG 377
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A+++ EM C P +QT +I+G + NI A + ++ + PD+ +N
Sbjct: 378 LILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFN 437
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + L++A++L++ M E I D +TY+++ GL K+ + V + + MI
Sbjct: 438 TLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILK 497
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T +L++ FC + +++ + + G P + + L+ G C G E A
Sbjct: 498 GCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGA 557
Query: 442 F 442
+
Sbjct: 558 Y 558
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/263 (21%), Positives = 126/263 (47%), Gaps = 1/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ C Q + A V ++ P+ +T NI++ G + G+++ + ++ +
Sbjct: 366 YNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAI 425
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G+ P V T+N IDGYCK+ A++L E M P T ++++G ++
Sbjct: 426 MKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVN 485
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + F EM + P+ YN +I + R + A +++ +M ++ + D V+++T+
Sbjct: 486 EVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLI 545
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G ++ LEG L+ ++ E + T L+ F + + ++ ++ +G
Sbjct: 546 YGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHR 605
Query: 420 PHGHALDLLVTGLCSRGRWEEAF 442
+ +L+ G C + A+
Sbjct: 606 ADSYTYRVLIDGSCKTANVDRAY 628
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 113/241 (46%), Gaps = 1/241 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C + ++ A + ++ AP+ T N +L G ++G V + + EM+
Sbjct: 436 FNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMI 495
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+G P+ +TYNI I+ +C+ +A ++ +M + P + TLI+G ++
Sbjct: 496 LKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLE 555
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF ++ ++ +N +I + +++ A ++ DEM K D+ TY +
Sbjct: 556 GAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLI 615
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K++ ++ MI+ F+P T ++ VN RV + + ++ G
Sbjct: 616 DGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVV 675
Query: 420 P 420
P
Sbjct: 676 P 676
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 128/303 (42%), Gaps = 2/303 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ C + +++ A +F + ++ P+ N L+ G G + +EM G
Sbjct: 334 LINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEG 393
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P + TYNI I+G CK G DA + + LP + T TLI G + A
Sbjct: 394 CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSAL 453
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL + M + + PD YN++++ L + +N E EM K + +TY+ +
Sbjct: 454 QLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENF 513
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+S+ +E K+ +M + P + L+ FC N ++ L+ L ++G+
Sbjct: 514 CRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATA 573
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML-QRYLVQANANEKLEDLDR 481
+ L+ + A + +ML + + +YR+L AN + L
Sbjct: 574 DTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVE 633
Query: 482 MIK 484
MIK
Sbjct: 634 MIK 636
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 79/380 (20%), Positives = 139/380 (36%), Gaps = 52/380 (13%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P A+ + L Y DQA + + +L + + + +S+ L
Sbjct: 86 PAAPAYNAIMDALVDAAYHDQA-------HKVYVRMLAAGVSPDLHTHTIRLRSF--CLT 136
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
A + + + G+ + ++ +AR +F ++L + PN N +L
Sbjct: 137 ARPHIALRLLRALPHRGAVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVL 196
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
+ GDV + +++ RG ++ TYNI I G C+ G +A+RL + M A
Sbjct: 197 HALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV- 255
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
PD+ YN +I L + AM
Sbjct: 256 -----------------------------------PDVVTYNTLIRGLCKKSMPQEAMHY 280
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M + D+ TY+T+ G K S ++ +L + FVP T L+ C
Sbjct: 281 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 340
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
V+ L L+ +G P + LV GLC +G A + +M E
Sbjct: 341 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEM------AEEGC 394
Query: 460 YRMLQRYLVQANANEKLEDL 479
+ +Q Y + N K+ ++
Sbjct: 395 HPDIQTYNIVINGLCKMGNI 414
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/278 (20%), Positives = 117/278 (42%), Gaps = 8/278 (2%)
Query: 185 LQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
++A+ +++A F ++ L P N ++ ++ Y M+ G
Sbjct: 60 IRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRMLAAGV 119
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL-IHGAGLVRNIHQAR 302
P + T+ IR+ +C A+RL + + + L HG + H AR
Sbjct: 120 SPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG-----HTHDAR 174
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QLFD+M ++ P++ A+N ++ +L + D+ A L+ ++ ++ + + TY+ GL
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ L +L D M VP T L++ C ++ ++++G P
Sbjct: 235 CEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++ G C +EA E K + + + +Y
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTY 331
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 83/186 (44%), Gaps = 8/186 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ +T +I++ + EE + +M +E G+ + FN L+ FC
Sbjct: 500 HPNPITY---NILIENFCRSNKMEEASKVIVKMSQE---GLHP-DAVSFNTLIYGFCRNG 552
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+++ A +F KL + ++ T N L+ F ++ E + EM+ +G R TY
Sbjct: 553 DLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYR 612
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ IDG CK A EM + +PS+ T +I+ + + QA + M K
Sbjct: 613 VLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKI 672
Query: 312 NLKPDI 317
+ P++
Sbjct: 673 GVVPEV 678
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 96/245 (39%), Gaps = 12/245 (4%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y I Y + G DA+ FE M+ AC P+ ++ QA +++ M
Sbjct: 56 YVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRML 115
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ PD+ + + S + A+ L+ + + V Y T+ GL
Sbjct: 116 AAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHR----GAVAYCTVVCGLYAHGHTH 171
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV-DLGLNLWGYLIDRGFCPHGHALDLL 428
+L+D+M+ P ++ C V + GL L G +I RG + ++
Sbjct: 172 DARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGL-LLGKVIQRGMSINLFTYNIW 230
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSE-ASYRMLQRYLVQAN-ANEKLEDLDRMIKNL 486
+ GLC GR EA M R V + +Y L R L + + E + L RM+
Sbjct: 231 IRGLCEAGRLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMN-- 286
Query: 487 QAVLP 491
Q LP
Sbjct: 287 QGCLP 291
>gi|226495005|ref|NP_001148062.1| GTP binding protein [Zea mays]
gi|195615570|gb|ACG29615.1| GTP binding protein [Zea mays]
Length = 535
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 10/373 (2%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTL 139
SN AL FF + P + A+ + L IL RM+ +L + + ++T
Sbjct: 122 SNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTN 181
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K +++L+R + +E +E F + ++ + G F +LL + C K ++EA +
Sbjct: 182 KMFAVLLNRYAGAHKVQEAIEVF-YLRKDYGFELDLVG---FQILLMSLCRYKHVEEAEA 237
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+F + F K+ NI+L G+ G + + +++++ + T+ I+ K
Sbjct: 238 LFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAK 297
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A++LF++M P + +I + I +A ++F EM R + D+
Sbjct: 298 NGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVAT 357
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I + + + + EL+D+ME K +N TY + L + + V L RM
Sbjct: 358 YNTLIKYMCKIKRMEKVYELLDDMEAKGCSPNNRTYS---YILKTTEKPKDVIALMQRME 414
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ +++ + + ++ + G+ +W + RG P + ++V GL S+G+
Sbjct: 415 RSGCKLDSDMYNLILNLY-IKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKL 473
Query: 439 EEAFECSKQMLVR 451
+EA + M R
Sbjct: 474 DEALQYYTTMKSR 486
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 49/265 (18%), Positives = 107/265 (40%), Gaps = 3/265 (1%)
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--E 274
+++L + S A+ F L G+ Y +D + +LF+E+ E
Sbjct: 114 LMVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEE 173
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
R + + + L++ + +A ++F + D+ + ++ SL R + +
Sbjct: 174 RRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVE 233
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L E +++ H +++ + G L ++++ +I K T +
Sbjct: 234 EAEALFREKKDE-FPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFI 292
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
N R+ + L+ + ++G P + ++ LC + + EA E +M R Q
Sbjct: 293 NALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQ 352
Query: 455 VSEASYRMLQRYLVQANANEKLEDL 479
A+Y L +Y+ + EK+ +L
Sbjct: 353 ADVATYNTLIKYMCKIKRMEKVYEL 377
>gi|255660806|gb|ACU25572.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LFEEM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 EDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/287 (22%), Positives = 122/287 (42%), Gaps = 3/287 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF JL + + L++ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAXJLETKGTQISDIYVFSGLIIAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S +E +L++ M++ VP T L+ C N RV L + ++ ++ +
Sbjct: 211 VLINGLCKESKMEDANELFEEMLDNGLVPNGVTFTTLIDGHCKNGRVXLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC +G ++A + +M ++ + + +Y L
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTL 317
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + + A EL +EM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFEEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ + ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E A K+M+ ++ + +Y L L Q +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K E+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMEDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E F+ M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFEEMLDNGLVPNGVT------FTTLIDGHCKNGRVXLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAXXYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYVPSV 416
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/105 (23%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +++ A +++ ++ L+ G + G E EM+
Sbjct: 314 YTTLIDGSCKEGDLETAXXYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|356507117|ref|XP_003522317.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g61400-like [Glycine max]
Length = 498
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/354 (26%), Positives = 153/354 (43%), Gaps = 23/354 (6%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT LH L + + FD WE+ + +R P+++T I+++ +
Sbjct: 2 PTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITY---GILMNCCCAQGDFSNA 58
Query: 159 LEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTM 215
+ FD M ER I E NV++ +M EA VF ++ PN T
Sbjct: 59 QKVFDEMLERGI----------EPNVVIYG-----QMGEAEGVFGRMRESGVVTPNLYTY 103
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G+ GDV + Y +M+ G P VVT+ ID K G A F M +
Sbjct: 104 KTLMDGYSMMGDVKRVFYLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAK 163
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P+ +LIHG ++ +A L EM + + D+ YN +I L L
Sbjct: 164 FDVVPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCGIFSDVVTYNILIKGLCDICRLEE 223
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AM LM++M+E + ++V ++ + G K +E ++ +M E P T +L+
Sbjct: 224 AMGLMEKMDEVEVFANSVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSILID 283
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
FC V + L+ ++ +G P L+ G C G +EAF K+ML
Sbjct: 284 GFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEML 337
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/300 (25%), Positives = 129/300 (43%), Gaps = 18/300 (6%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
P A+ +H + +A L ++R + + +I++ + EE +
Sbjct: 167 VPNGHAYNSLIHGYCKAGDLLEAMWLRLEMERCG-IFSDVVTYNILIKGLCDICRLEEAM 225
Query: 160 EAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
++M E E+F S FNV++ C +M++A V ++ PN T +I
Sbjct: 226 GLMEKMDEVEVFAN-----SVXFNVVIDGCCKIGDMEKAIEVCSQMTEEXIEPNVITFSI 280
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ GF G+V A Y EMV++G P VVTY IDG+CK G +A RL +EM
Sbjct: 281 LIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNTKEAFRLHKEMLDAG 340
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLF----------DEMPKRNLKPDIGAYNAMISSL 327
P++ T++ +I G + A ++F D+M R P+ Y +I L
Sbjct: 341 LSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFCSPNSMMYAILIQGL 400
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ A + EM+ D + Y TM +S + V L+ M++ + T
Sbjct: 401 CEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDVMMLHADMVKMGVIQNT 460
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 125/282 (44%), Gaps = 15/282 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L++ C ++EA + K+ + FA N+ N+++ G + GD+ +M
Sbjct: 208 YNILIKGLCDICRLEEAMGLMEKMDEVEVFA-NSVXFNVVIDGCCKIGDMEKAIEVCSQM 266
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
P+V+T++I IDG+C KG AM L+ EM +P + T T LI G V N
Sbjct: 267 TEEXIEPNVITFSILIDGFCNKGNVRAAMGLYTEMVIKGIVPDVVTYTALIDGHCKVGNT 326
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM----------DEMEEKRI 348
+A +L EM L P++ + +I L++ N A+++ D+M+ +
Sbjct: 327 KEAFRLHKEMLDAGLSPNMFTVSCVIDGLLKDGRTNDAIKMFLEKTGAGYPGDKMDSRFC 386
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT-VVMLMKFFCVNFRVDLGL 407
+++ Y + GL + + K + M F P V ML F +D+ +
Sbjct: 387 SPNSMMYAILIQGLCEDGXIFKATKFFAEMKWNGFKPDMLVYVTMLQAHFQSKHMIDV-M 445
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
L ++ G + +L G G + A CS+ ++
Sbjct: 446 MLHADMVKMGVIQNTFIYRVLSRGYRENGYLKSALMCSEYLM 487
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 26/189 (13%)
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+P+LQ L+HG + +++ +M R P + Y +++ D + A +
Sbjct: 1 MPTLQPCNALLHGLVKTQMFDSLWEVYVDMMSRRFSPTVITYGILMNCCCAQGDFSNAQK 60
Query: 339 LMDEMEEKRIGHDNVTYHTM-----FFGLMKSSG------------LEG---------VC 372
+ DEM E+ I + V Y M FG M+ SG ++G V
Sbjct: 61 VFDEMLERGIEPNVVIYGQMGEAEGVFGRMRESGVVTPNLYTYKTLMDGYSMMGDVKRVF 120
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
LY M++ P T L+ + N + Y+ P+GHA + L+ G
Sbjct: 121 YLYCDMLKPGLYPDVVTFATLIDVLRKMGDLKAAXNCFAYMAKFDVVPNGHAYNSLIHGY 180
Query: 433 CSRGRWEEA 441
C G EA
Sbjct: 181 CKAGDLLEA 189
>gi|297834384|ref|XP_002885074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330914|gb|EFH61333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 517
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/421 (22%), Positives = 189/421 (44%), Gaps = 25/421 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
L+ LV V+ R S+ A + ++H + + + + L +L +MR F++
Sbjct: 101 LTEELVFEVVNR---NRSDWKPAYILSRLIVKHSVYISSSLVYNEILDVLGKMRRFEEFH 157
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--- 180
+++ + + + K+ ++L+R + +E + F+R R+FG E+
Sbjct: 158 QVVDEMSK-RDGFVDEKTYEVLLNRYAAAHKVDEAVGVFERR--------REFGIEDDLV 208
Query: 181 -FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+ LL C K ++ A ++F F + +TMNI+L G+ G+V + + +++
Sbjct: 209 AFHGLLMWLCRYKHVEFAETLFCSRRREFGCDIRTMNIILNGWCVLGNVHEAKRIWKDII 268
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P VV+Y I+ KKG G AM L+ + P ++ +I + I
Sbjct: 269 ASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKICNNVIDALCFKKRIP 328
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK--RIGHDNVTYHT 357
+A ++F EM ++ P++ YN+++ L + R EL++EME K ++VT+
Sbjct: 329 EALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWELVEEMEHKGGSCSPNDVTFGY 388
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ +S ++ V +RM + K + ++ + + + +WG + G
Sbjct: 389 LLKYSQRSKDVDAV---LERMAKNKCEMTSDLYNLMFRLYVQWDNEEKVREIWGEMERSG 445
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P + + GL ++G+ EA ++M+ + V E ML L Q ++E
Sbjct: 446 LGPDQRTYTIRIHGLHTKGKIGEALSYFQEMM-SKGMVPEPRTEML---LNQNKTKPRVE 501
Query: 478 D 478
D
Sbjct: 502 D 502
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 43/234 (18%), Positives = 96/234 (41%), Gaps = 1/234 (0%)
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
S + YN +D K F + ++ +EM + +T L++ + +A +F
Sbjct: 136 SSLVYNEILDVLGKMRRFEEFHQVVDEMSKRDGFVDEKTYEVLLNRYAAAHKVDEAVGVF 195
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+ + ++ D+ A++ ++ L R + + A L + G D T + + G
Sbjct: 196 ERRREFGIEDDLVAFHGLLMWLCRYKHVEFAETLFCS-RRREFGCDIRTMNIILNGWCVL 254
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
+ +++ +I K P + ++ ++ + L+ L + G P
Sbjct: 255 GNVHEAKRIWKDIIASKCKPDVVSYGTMINALTKKGKLGKAMELYRALWETGRNPDVKIC 314
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++ LC + R EA E K+M + + +Y L ++L + EK+ +L
Sbjct: 315 NNVIDALCFKKRIPEALEVFKEMSEKGPSPNVVTYNSLLKHLCKIRRTEKVWEL 368
>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 602
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 98/421 (23%), Positives = 184/421 (43%), Gaps = 30/421 (7%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ L + + + NVL + KALE L+ P + L L
Sbjct: 163 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKALEV----LERMSVAPDVVTYNTILRSL 218
Query: 114 ARMRYFDQAWELMS-HVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+A E++ +QR +P ++T +I++ + ++ D M
Sbjct: 219 CDSGKLKEAMEVLDRQLQRECYPDVITY---TILIEATCNDSGVGQAMKLLDEM------ 269
Query: 172 GIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRF-----APNNKTMNILLLGF 222
RK G + +NVL+ C + + EA +K L+ PN T NI+L
Sbjct: 270 --RKKGCKPDVVTYNVLINGICKEGRLDEA----IKFLNNMPSYGCKPNVITHNIILRSM 323
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+G E +M+ +G PSVVT+NI I+ C+K G A+ + E+M + C+P+
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ L+HG + + +A + + M R PDI YN ++++L + ++AA+E++++
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ K +TY+T+ GL K E +L + M P T L++ +
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD + ++ + P + ++ GLC + A + M+ + + +EA+Y +
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563
Query: 463 L 463
L
Sbjct: 564 L 564
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/386 (23%), Positives = 171/386 (44%), Gaps = 17/386 (4%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
E KF + + PD T I R +A +M ++ + P ++T +
Sbjct: 124 EGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITY---N 180
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+++ K ++ LE +RM V +N +L++ C ++KEA V +
Sbjct: 181 VLIGGYCKSGEIDKALEVLERMSVAPDV-------VTYNTILRSLCDSGKLKEAMEVLDR 233
Query: 204 LLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
L R P+ T IL+ +SG AM++ EM +G +P VVTYN+ I+G CK+G
Sbjct: 234 QLQRECYPDVITYTILIEATCNDSGVGQAMKLL-DEMRKKGCKPDVVTYNVLINGICKEG 292
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A++ M C P++ T ++ A +L +M ++ P + +N
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I+ L R R L A++++++M + ++++Y+ + G + ++ + + M+
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T L+ C + +VD + + L +G P + ++ GL G+ E A
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYA 472
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYL 467
E ++M + + +Y L R L
Sbjct: 473 VELLEEMRRKGLKPDIITYSTLLRGL 498
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 131/282 (46%), Gaps = 16/282 (5%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARM----RYFDQAWELMSHVQR--THPSLLTLKS 141
E KF P + P+ + IL M R+ D A L+S + R PS++T
Sbjct: 296 EAIKFLNNMPSYGCKPNVITHNI-ILRSMCSTGRWMD-AERLLSDMLRKGCSPSVVTF-- 351
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+I+++ + + + ++ ++M + V S +N LL FC +K+M A
Sbjct: 352 -NILINFLCRKRLLGRAIDVLEKMPKHGCVP----NSLSYNPLLHGFCQEKKMDRAIEYL 406
Query: 202 VKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++SR P+ T N LL + G V A +++ +G P ++TYN IDG K
Sbjct: 407 EIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 466
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ L EEM R P + T +TL+ G G + +A ++F +M ++KP Y
Sbjct: 467 GKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTY 526
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
NA++ L + + + A++ + M EK TY + G+
Sbjct: 527 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGI 568
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 100/216 (46%), Gaps = 1/216 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ C ++ + A V K+ PN+ + N LL GF + + + MV
Sbjct: 351 FNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 410
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P +VTYN + CK G A+ + ++ C P L T T+I G V
Sbjct: 411 SRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 470
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L +EM ++ LKPDI Y+ ++ L R ++ A+++ +ME I VTY+ +
Sbjct: 471 YAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 530
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
GL K+ M+E P T +L++
Sbjct: 531 LGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIE 566
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 120/282 (42%), Gaps = 19/282 (6%)
Query: 172 GIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGFKE 224
G R F EEF N+ L+ E++E +K L R P+ L+ GF
Sbjct: 100 GSRSF--EEFASNIHLRKLVRNGELEEG----LKFLERMIYQGDIPDVIACTSLIRGFCR 153
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG + G P V+TYN+ I GYCK G A+ E +ER++ P + T
Sbjct: 154 SGKTKKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKAL---EVLERMSVAPDVVT 210
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T++ + +A ++ D +R PD+ Y +I + + AM+L+DEM
Sbjct: 211 YNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMR 270
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+K D VTY+ + G+ K L+ K + M P T ++++ C R
Sbjct: 271 KKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWM 330
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSR---GRWEEAFE 443
L ++ +G P ++L+ LC + GR + E
Sbjct: 331 DAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLE 372
>gi|255660846|gb|ACU25592.1| pentatricopeptide repeat-containing protein [Tamonea boxiana]
Length = 418
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 145/319 (45%), Gaps = 17/319 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E F+ T +H P D K L L +++YF W + + +P+ +L +I
Sbjct: 85 AIECFRLTREHKLRVPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSV 200
++ R K E + + +F I K+G FN L+ + ++ + +
Sbjct: 142 LMHRFCK--------EGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKL 193
Query: 201 FVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+ S P+ T ++L+ G + + ++EM+ +G P+ VT+ IDG+CK
Sbjct: 194 KNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM +++M LP L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 254 NGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKIT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL++A EL + M ++ I D+V Y + GL + K+ M+
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFC 398
P T M++ FC
Sbjct: 374 SVGLKPDNGTYTMIINEFC 392
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ F + G++ + + + G RPSVV++N ++GY + G +L M
Sbjct: 140 NILMHRFCKEGEIWIAQSVFDSITKWGLRPSVVSFNTLMNGYIRLGDLDQGFKLKNAMHA 199
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T + LI+G +++A LF+EM + L P+ + +I + +++
Sbjct: 200 SGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGVTFTTLIDGHCKNGKVDS 259
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AME +M + D +TY+T+ +GL K L+ L D M P T L+
Sbjct: 260 AMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEMRMKGLKPDKITYTTLID 319
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C +D L ++ A L++GLC GR +A + ++ML +
Sbjct: 320 GNCKEGDLDSAFELRETMVKESIRLDDVAYTALISGLCQEGRATDAEKMLREMLSVGLKP 379
Query: 456 SEASYRML 463
+Y M+
Sbjct: 380 DNGTYTMI 387
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 156/392 (39%), Gaps = 77/392 (19%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSM-SIMLSRISKFQS---Y 155
+P F TLH + M H TH LL KS+ I++SR K + +
Sbjct: 3 SPANXTFRHTLH----------TYCTMIHFLCTHQMLLEAKSLIQIVVSRKGKDSASAVF 52
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV-----KLLSRFAP 210
LE +I+V F+ L+ A+ +++A F KL F
Sbjct: 53 AAILETKGTQRSDIYV---------FSGLINAYLESGFVRDAIECFRLTREHKLRVPFDT 103
Query: 211 NNKTMNIL--LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
K + L L FK + FY E++ G+ S+ +NI + +CK+G
Sbjct: 104 CRKVLEHLMKLKYFK------LVWGFYKEILECGYPASLYFFNILMHRFCKEG------- 150
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
I A+ +FD + K L+P + ++N +++ I
Sbjct: 151 ----------------------------EIWIAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R DL+ +L + M + D TY + GL K S + L++ M++ VP
Sbjct: 183 RLGDLDQGFKLKNAMHASGVQPDVYTYSVLINGLCKESKMNEANDLFNEMLDKGLVPNGV 242
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T L+ C N +VD + + ++ + F P + L+ GLC +G ++A + +M
Sbjct: 243 TFTTLIDGHCKNGKVDSAMETYKQMLSQCFLPDLITYNTLIYGLCKKGDLKQAQDLLDEM 302
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
++ + + +Y L + N K DLD
Sbjct: 303 RMKGLKPDKITYTTL------IDGNCKEGDLD 328
Score = 42.4 bits (98), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 48/107 (44%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + ++ A R VK R ++ L+ G + G T E E
Sbjct: 314 YTTLIDGNCKEGDLDSAFELRETMVKESIRL--DDVAYTALISGLCQEGRATDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P TY + I+ +CKK A +L +EM+R +P + T
Sbjct: 372 MLSVGLKPDNGTYTMIINEFCKKEDVKTAAKLLKEMQRQGHVPCVVT 418
>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
mitochondrial-like [Vitis vinifera]
Length = 835
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHE 237
E FNVL+ +C E+ A + + + AP+ T N L+ GF + GD+ + E
Sbjct: 18 EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ L P+V+TY ID YCK C DA+ +++EM + +P + T T +++G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A+ +F EM + + P+ +Y +I SL + ++ A L M + IG D V Y
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ ++ ++E VP T L+ C V+ G L + ++
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
P+ +V G +G EA + ++M+ R
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 41/309 (13%)
Query: 164 RMEREIF-VGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ E E F G+R+ G S FN ++ A+C + + A + ++ S PN+ T NI
Sbjct: 417 KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPS------------------------------- 246
L+ +G++ ++M++ GF P+
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536
Query: 247 ----VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ TYN I +C+ G A +F++M L + T LIHG + ++ +A
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +M + P++ YN ++ L R + A L+++M+E+ + + TY + G
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K ++ KLY MI FVPKTRT +L+ F ++ L + RG P+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 423 HALDLLVTG 431
D+L+ G
Sbjct: 717 STYDILICG 725
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ T K++ L SK + + L D++ + +G+ K +N L+ FC
Sbjct: 503 HPTPTTHKAV---LDASSKSRRADVILHMHDQL---VGMGV-KLDLSTYNTLISTFCRLG 555
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
++ A VF ++ + + T N L+ G+ S + + +M+ G P+V TYN
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + G +A L +M+ +P+ T L+ G G + N+ + +L+ EM +
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P YN +IS + + ++ A ELM EM+ + I ++ TY + G K S +
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 372 CK------------LYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
K L++ M E F+P T+ C++F
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLA------CISF 771
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
R SV +N+ IDGYC+ G A+ L E M+ P + T TL++G + ++ A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L E+ NL+P++ Y +I + + + L A+ + DEM K + D VTY + GL
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
KS +E ++ M E VP + L+ V L G ++ RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 423 HALDLLVTGLCSRGRWEEA 441
L+ GL G A
Sbjct: 193 VVYTALMDGLFKAGMANNA 211
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 3/287 (1%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
AP++ T N ++ + + G++ +EM G +P+ +T NI + C G M
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +M + P+ T ++ + R + D++ +K D+ YN +IS+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + A + +M K I D +TY+ + G SS L+ ++ +M+ P
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +L+ + L + +RG P+ D+LV+G G +E + +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
M+ + +Y +L + +K+ +++ +Q PP
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKG---KKMSQAKELMQEMQVRGIPPN 715
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 166/423 (39%), Gaps = 49/423 (11%)
Query: 101 PTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
P PD + ++ ++ A +LM + + P+++T + ++ K Q E
Sbjct: 48 PAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY---TTLIDAYCKSQCLE 104
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+ L +D M + V + ++ C +++EA+SVF ++ PN +
Sbjct: 105 DALYMYDEMTVKSLVP----DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFR------------------------------- 244
L+ + G+V + MV+RG
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 245 ----PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
P+ VTY+ IDG+CK G L +EME P++ ++++ G +++
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +M +RN+ P++ Y +I + A++L EM+ + + +N +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L +S +E +L+ M+ +P +M F + N+ + ++
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Query: 421 HGHALDLLVTGLCSRGRWE-EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
A ++L+ GL G++E E+F + L S M+ Y + N L+ L
Sbjct: 401 DVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD-SATFNTMINAYCKEGNLGNALKLL 459
Query: 480 DRM 482
+ M
Sbjct: 460 NEM 462
>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
Length = 597
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 93/407 (22%), Positives = 176/407 (43%), Gaps = 45/407 (11%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PT F ++ L ++ F QA EL + + P + T ++ L +I ET
Sbjct: 161 PTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIG------ET 214
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
A +++ G + ++ L+ + C + + EA +F + ++ +P+ T
Sbjct: 215 AAAAGLLKKMEEAGCQP-NMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTS 273
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + +EM P +VT+N+ +D +CK+G +A+ + + M +
Sbjct: 274 LIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMG 333
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ T ++L++G L ++ +AR+LF M + KP+I +YN +I+ + + ++ AM
Sbjct: 334 VEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAM 393
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L +EM + + +NV+Y+T+ G + L L+ M +P T +L+ F
Sbjct: 394 QLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGF 453
Query: 398 CVN------FRVDLGLN-----------------------------LWGYLIDRGFCPHG 422
C FR+ + L+ L +G PH
Sbjct: 454 CKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHV 513
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ GLC G +EA E + M E SY ++ R L+Q
Sbjct: 514 QLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRGLLQ 560
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 170/380 (44%), Gaps = 17/380 (4%)
Query: 101 PTPDAFEKTLHILARM-RYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEE 157
P F K L + +M +Y+D L ++ P++ TL SI ++ + Q +
Sbjct: 90 PCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTL---SIFMNCFCQLQRVDL 146
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMN 216
F + + I +G++ F L+ C E +A +F ++++ P+ T N
Sbjct: 147 ---GFSVLAKVIKLGLQP-TIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYN 202
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G + G+ A +M G +P++VTY+ ID C+ +A+ +F M+
Sbjct: 203 TIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + T T+LI G +A L +EM N+ PDI +N ++ + + ++ A
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ ++ M E + + VTY ++ +G + + KL+ MI P + +L+
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C R+D + L+ +I +G P+ + + L+ G C G+ EA + + M
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442
Query: 457 EASYRML------QRYLVQA 470
+Y +L Q YL +A
Sbjct: 443 LFTYSILLDGFCKQGYLGKA 462
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 157/370 (42%), Gaps = 7/370 (1%)
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF-QSYEETLEAFDRMEREIFVG 172
+ R D A +H+ P L + + +LS I K Q Y+ + +ME VG
Sbjct: 68 SSFRNIDDALASFNHMLHRKP-LPCIIQFAKLLSAIVKMGQYYDVVISLSKQME---LVG 123
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAM 231
+ ++ + FC + + SV K++ P T L+ G + G+
Sbjct: 124 LSP-NIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQA 182
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
+ +MV +G +P V TYN I+G CK G A L ++ME C P++ T +TLI
Sbjct: 183 VELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDS 242
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
R +++A +F M + + PDI Y ++I L + A L++EM I D
Sbjct: 243 LCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPD 302
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
VT++ + K + + M E P T LM + + V L+
Sbjct: 303 IVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFH 362
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+I +G P+ + ++L+ G C R +EA + +M+ + + SY L Q
Sbjct: 363 VMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLG 422
Query: 472 ANEKLEDLDR 481
+ +DL R
Sbjct: 423 KLREAQDLFR 432
>gi|255660796|gb|ACU25567.1| pentatricopeptide repeat-containing protein [Verbena litoralis]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M + G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANXLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + +++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q +
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNL 486
E + R + N+
Sbjct: 363 VDAEKMLREMLNV 375
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 28/330 (8%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKT---MNILLLGFKESGDVTAMEMFY 235
+ + ++ CTQ+ + EA+++ ++SR + + IL + D+
Sbjct: 14 QSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73
Query: 236 HEMVLRGF-RPSVVTYNIRID-------GYCKK--------GCFGDAMRLFEEMERVACL 279
+ GF R ++ Y + + C+K F +EE
Sbjct: 74 TAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYP 133
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
SL L+H I A+ +FD + K +L+P + ++N +++ I+ DL+ L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M+ + D TY + GL K S ++ L+D M++ VP T L+ C
Sbjct: 194 KNAMQVSGVQPDVYTYSVLINGLCKESKMDDANXLFDEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
N RVDL + ++ ++ + P + L+ GLC +G ++A + +M+++ + +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKIT 313
Query: 460 YRMLQRYLVQANANE-----KLEDLDRMIK 484
Y L+ N E E RMIK
Sbjct: 314 YTT----LIDGNCKEGDLETAFEYRKRMIK 339
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
FD M + V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NXLFDEMLDKGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM+++G P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A E+ + Q P L+T ++ L + + +A D ++ I G+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLXP-D 310
Query: 178 SEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+ L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKM 368
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|410109951|gb|AFV61055.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
velutina]
Length = 406
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 157/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E + T +H + P D K L L +++YF W + + +P+ +L +I
Sbjct: 66 AIECYXLTRKHKLWVPF-DTCRKVLEYLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 122
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G + +N L+ + + E R
Sbjct: 123 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYIRLGVLDEGFRL 174
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + + EM+++G P+ VT+ IDG+CK
Sbjct: 175 KSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGVTFTTLIDGHCK 234
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L D+M ++ LKPD
Sbjct: 235 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDMSRKGLKPDKIT 294
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + L +A E + ++ I D+V Y + GL + K+ M+
Sbjct: 295 YTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRSVDAEKMLREML 354
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T T M++ FC V G L + G P ++L+ G
Sbjct: 355 SVGLNPDTGTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 406
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 121/262 (46%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS + TL++G
Sbjct: 104 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSAVSYNTLMNGYI 163
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 164 RLGVLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKESKMDDADELFDEMLVKGLVPNGV 223
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 224 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDDM 283
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G AFE K+++ ++ + Y L L Q +
Sbjct: 284 SRKGLKPDKITYTTLIDGCCKEGVLVSAFEHRKRLIQENIRLDDVVYTALISGLCQEGRS 343
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
D ++M++ + +V L P T
Sbjct: 344 ---VDAEKMLREMLSVGLNPDT 362
>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
Length = 882
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHE 237
E FNVL+ +C E+ A + + + AP+ T N L+ GF + GD+ + E
Sbjct: 18 EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ L P+V+TY ID YCK C DA+ +++EM + +P + T T +++G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A+ +F EM + + P+ +Y +I SL + ++ A L M + IG D V Y
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ ++ ++E VP T L+ C V+ G L + ++
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
P+ +V G +G EA + ++M+ R
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 41/309 (13%)
Query: 164 RMEREIF-VGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ E E F G+R+ G S FN ++ A+C + + A + ++ S PN+ T NI
Sbjct: 417 KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPS------------------------------- 246
L+ +G++ ++M++ GF P+
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMG 536
Query: 247 ----VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ TYN I +C+ G A +F++M L + T LIHG + ++ +A
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +M + P++ YN ++ L R + A L+++M+E+ + + TY + G
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K ++ KLY MI FVPKTRT +L+ F ++ L + RG P+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 423 HALDLLVTG 431
D+L+ G
Sbjct: 717 STYDILICG 725
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ T K++ L SK + + L D++ + +G+ K +N L+ FC
Sbjct: 503 HPTPTTHKAV---LDASSKSRRADVILHXHDQL---VGMGV-KLDLSTYNTLISTFCRLG 555
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
++ A VF ++ + + T N L+ G+ S + + +M+ G P+V TYN
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + G +A L +M+ +P+ T L+ G G + N+ + +L+ EM +
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P YN +IS + + ++ A ELM EM+ + I ++ TY + G K S +
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 372 CK------------LYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
K L++ M E F+P T+ C++F
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLA------CISF 771
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
R SV +N+ IDGYC+ G A+ L E M+ P + T TL++G + ++ A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L E+ NL+P++ Y +I + + + L A+ + DEM K + D VTY + GL
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
KS +E ++ M E VP + L+ V L G ++ RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 423 HALDLLVTGLCSRGRWEEA 441
L+ GL G A
Sbjct: 193 VVYTALMDGLFKAGMANNA 211
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 118/287 (41%), Gaps = 3/287 (1%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
AP++ T N ++ + + G++ +EM G +P+ +T NI + C G M
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +M + P+ T ++ + R D++ +K D+ YN +IS+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTF 551
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + A + +M K I D +TY+ + G SS L+ ++ +M+ P
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +L+ + L + +RG P+ D+LV+G G +E + +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
M+ + +Y +L + +K+ +++ +Q PP
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKG---KKMSQAKELMQEMQVRGIPPN 715
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 166/423 (39%), Gaps = 49/423 (11%)
Query: 101 PTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
P PD + ++ ++ A +LM + + P+++T + ++ K Q E
Sbjct: 48 PAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY---TTLIDAYCKSQCLE 104
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+ L +D M + V + ++ C +++EA+SVF ++ PN +
Sbjct: 105 DALYMYDEMTVKSLVP----DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFR------------------------------- 244
L+ + G+V + MV+RG
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 245 ----PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
P+ VTY+ IDG+CK G L +EME P++ ++++ G +++
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +M +RN+ P++ Y +I + A++L EM+ + + +N +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L +S +E +L+ M+ +P +M F + N+ + ++
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Query: 421 HGHALDLLVTGLCSRGRWE-EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
A ++L+ GL G++E E+F + L S M+ Y + N L+ L
Sbjct: 401 DVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD-SATFNTMINAYCKEGNLGNALKLL 459
Query: 480 DRM 482
+ M
Sbjct: 460 NEM 462
>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
mitochondrial-like [Glycine max]
Length = 545
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 155/328 (47%), Gaps = 29/328 (8%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C +K + EA ++F ++ + + N T + ++ GF G +T F +EMV
Sbjct: 206 YNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMV 265
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
L+ P V YN +D K+G +A + + + P++ T TLI G
Sbjct: 266 LKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNA 325
Query: 292 AGL-------------------VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
GL ++ + +A L+ EM ++N+ P+ YN++I L +
Sbjct: 326 VGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGR 385
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV-V 391
++ A +L+DEM ++ + +TY+++ GL K+ L+ L ++M + P T+ +
Sbjct: 386 ISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNI 445
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+L C R+ L+ L+D+G+ P+ + ++++ G C G +EA+ +M
Sbjct: 446 LLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDS 505
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDL 479
+ +++++ L++ +K E L
Sbjct: 506 GCSPNAITFKIIICALLEKGETDKAEKL 533
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 98/446 (21%), Positives = 178/446 (39%), Gaps = 69/446 (15%)
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT-----HPSLLTLKSMSIMLS 147
TL+ P F P P + H +R F+ + + R P ++ + L
Sbjct: 15 TLKFPSFLPNPSLPKLHSHFHSRPPSFENVDDALFQFHRMLCMRHTPPIIQFNKI---LD 71
Query: 148 RISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCTQKEMKEARSVFVKLL 205
+K + Y + R+E ++ + F N+L+ FC ++ A SV K+L
Sbjct: 72 SFAKMKHYPTVVSLSRRLE------LKAIQPDFFTLNILINCFCHLGQINLAFSVLSKIL 125
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR-------------------- 244
+ P+ T+ L+ G G V F+ +++ +GFR
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETR 185
Query: 245 ---------------PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
P+VV YN ID CK+ +A LF EM ++ T + +I
Sbjct: 186 AAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAII 245
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
HG +V + +A +EM + + PD+ YN ++ +L + + A ++ + + +
Sbjct: 246 HGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLK 305
Query: 350 HDNVTYHTMFFGLMK----SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
+ +TY+T+ G K + GL GV P + +++ C RV+
Sbjct: 306 PNVITYNTLIDGYAKHVFNAVGLMGV------------TPDVWSYNIMINRLCKIKRVEE 353
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
LNL+ + + P+ + L+ GLC GR A++ +M R + +Y L
Sbjct: 354 ALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLIN 413
Query: 466 YLVQANANEKLEDLDRMIKNLQAVLP 491
L + +K L +K+ Q + P
Sbjct: 414 GLCKNGQLDKAIALINKMKD-QGIQP 438
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 103/224 (45%), Gaps = 6/224 (2%)
Query: 162 FDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
D + +F + G +N+++ C K ++EA +++ ++ + PN T N
Sbjct: 315 IDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYN 374
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +SG ++ EM RG +V+TYN I+G CK G A+ L +M+
Sbjct: 375 SLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434
Query: 277 ACLPSLQTITTLIHGAGLV-RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T+ L+HG + + A+ LF ++ + P++ YN +I + L+
Sbjct: 435 GIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDE 494
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
A L +ME+ + +T+ + L++ + KL MI
Sbjct: 495 AYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMI 538
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 15/219 (6%)
Query: 102 TPDAFEKTLHI--LARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQ-SYE 156
TPD + + I L +++ ++A L H + P+ +T S+ L + + +++
Sbjct: 332 TPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWD 391
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E DR + +N L+ C ++ +A ++ K+ + P+ T+
Sbjct: 392 LIDEMHDRGHHANVI--------TYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTL 443
Query: 216 NILLLGFKESGD-VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NILL G G + + + +++ +G+ P+V TYNI I G+CK+G +A L +ME
Sbjct: 444 NILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKME 503
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
C P+ T +I +A +L EM R L
Sbjct: 504 DSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542
>gi|18396782|ref|NP_566222.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|79312733|ref|NP_001030630.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546763|sp|Q9M8W9.2|PP211_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04130, mitochondrial; Flags: Precursor
gi|332640519|gb|AEE74040.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|332640520|gb|AEE74041.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 508
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 14/339 (4%)
Query: 26 TTTQSSEIERITRII----NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
T + S+ E I +I D D + + LS LV +L R
Sbjct: 43 TLDEYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWR 102
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
+ L L++ + H H + DA++ + IL + + +D+ E + ++ L+TL +
Sbjct: 103 SALGILKWAESCKGHKH---SSDAYDMAVDILGKAKKWDRMKEFVERMR--GDKLVTLNT 157
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
++ ++ R + +EE + FDR+ G+ K +E N+LL C +K +++AR V
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGE---FGLEK-NTESMNLLLDTLCKEKRVEQARVVL 213
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L S PN T NI + G+ ++ V EM GFRP V++Y I YC++
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
F + EME P+ T TT++ + +A ++ M + KPD YN
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 322 AMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
+I +L R L A + EM E + + TY++M
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12775, mitochondrial-like [Glycine max]
Length = 750
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 141/302 (46%), Gaps = 1/302 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K + +A ++ +++ + +PN T N L+ GF G + +EM
Sbjct: 206 YNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMK 265
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P V T+N ID K+G A + M + P + T +LI G + +
Sbjct: 266 LKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVK 325
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ +F M + + P++ Y MI L + + ++ AM L +EM+ K + D VTY ++
Sbjct: 326 NAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLI 385
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ LE L +M E P + +L+ C R++ + L+ +G+
Sbjct: 386 DGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYH 445
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ ++++ GLC + EA + +M + +++ + L + + N+K E +
Sbjct: 446 LNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKI 505
Query: 480 DR 481
R
Sbjct: 506 LR 507
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/380 (23%), Positives = 168/380 (44%), Gaps = 22/380 (5%)
Query: 102 TPDAFEKTLHIL----ARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSY 155
TPD TL+IL + + A+ +++++ + HP+ +TL ++ + +
Sbjct: 95 TPDLC--TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTL---IKGLCFRGEI 149
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
++ L D++ + F + + L+ C E K + KL P+
Sbjct: 150 KKALYFHDQVVAQGF----QLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVM 205
Query: 215 MNILLLGFKES---GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
N ++ ++ GD + Y EM+++G P+VVTYN + G+C G +A L
Sbjct: 206 YNTIIHSLCKNKLLGDACDL---YSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLN 262
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
EM+ P + T TLI G + A+ + M K +KPD+ YN++I
Sbjct: 263 EMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLN 322
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A + M + + + TY TM GL K ++ L++ M +P T
Sbjct: 323 KVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYT 382
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ C N ++ + L + ++G P ++ +L+ LC GR E A E +++LV+
Sbjct: 383 SLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVK 442
Query: 452 RRQVSEASYRMLQRYLVQAN 471
++ +Y ++ L +A+
Sbjct: 443 GYHLNVQTYNVMINGLCKAD 462
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/367 (22%), Positives = 158/367 (43%), Gaps = 30/367 (8%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
+++ + M+ + K + +E + F+ M+ + + I + S L+ C ++
Sbjct: 342 NVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTS-----LIDGLCKNHHLER 396
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A ++ K+ + P+ + ILL + G + + F+ ++++G+ +V TYN+ I+
Sbjct: 397 AIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMIN 456
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---------------AGLVRNIHQ 300
G CK FG+AM L +ME C+P T T+I + R + +
Sbjct: 457 GLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQE 516
Query: 301 ARQL--------FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
AR++ M K +KPD+ Y ++ +L A + M + + +
Sbjct: 517 ARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNV 576
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
Y M GL K ++ L++ M P T L+ C N ++ + L
Sbjct: 577 QCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKE 636
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ + G P ++ +L+ GLC GR E A E +++LV+ ++ Y + L +A
Sbjct: 637 MKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGL 696
Query: 473 NEKLEDL 479
++ DL
Sbjct: 697 FDEALDL 703
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 131/278 (47%), Gaps = 7/278 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC +KEA S+ ++ L P+ T N L+ + G + A ++ M+
Sbjct: 241 YNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMM 300
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P VVTYN IDGY +A +F M + P+++T TT+I G + +
Sbjct: 301 KACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVD 360
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF+EM +N+ PDI Y ++I L + L A+ L +M+E+ I D +Y +
Sbjct: 361 EAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILL 420
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL---GLNLWGYLIDR 416
L K LE + + R++ + +T +++ C + DL ++L + +
Sbjct: 421 DALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLC---KADLFGEAMDLKSKMEGK 477
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
G P ++ L + ++A + ++M+ R Q
Sbjct: 478 GCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQ 515
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 158/384 (41%), Gaps = 33/384 (8%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISK 151
+++ + P + + L + + ++A L + Q P + S +I+L + K
Sbjct: 369 MKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVY---SYTILLDALCK 425
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-P 210
E E F R+ V + +NV++ C EA + K+ + P
Sbjct: 426 GGRLENAKEFFQRL----LVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMP 481
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF-----------------------RPSV 247
+ T ++ E + E EM+ RG +P V
Sbjct: 482 DAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDV 541
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTY +DGY A +F M ++ P++Q T +I G + + +A LF+E
Sbjct: 542 VTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEE 601
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +N+ P+I Y ++I +L + L A+ L+ EM+E I D +Y + GL KS
Sbjct: 602 MKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGR 661
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
LEG +++ R++ + + ++ C D L+L + D+G P D+
Sbjct: 662 LEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDI 721
Query: 428 LVTGLCSRGRWEEAFECSKQMLVR 451
++ L + ++A + +M+ R
Sbjct: 722 IIWALFEKDENDKAEKILXEMIAR 745
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 2/209 (0%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P +N + + + LF++ E P L T+ L++ + +I A +
Sbjct: 61 PPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSV 120
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ KR P+ N +I L ++ A+ D++ + + V+Y T+ GL K
Sbjct: 121 LANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCK 180
Query: 365 SSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ + V +L R +EG V P ++ C N + +L+ +I +G P+
Sbjct: 181 TGETKAVARLL-RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVV 239
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ LV G C G +EAF +M ++
Sbjct: 240 TYNALVYGFCIMGHLKEAFSLLNEMKLKN 268
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 52/111 (46%)
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
V L+ + P T+ +LM FC + ++ ++ RG+ P+ L+ L+
Sbjct: 82 VISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIK 141
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDR 481
GLC RG ++A Q++ + Q+++ SYR L L + + + L R
Sbjct: 142 GLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLR 192
>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
Length = 871
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 94/348 (27%), Positives = 159/348 (45%), Gaps = 12/348 (3%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LLQ L + S + N L ++ KA E ++ ++ FTP+ L L
Sbjct: 444 LLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVR-CGFTPSSSTCNSLLMGL 502
Query: 114 ARMRYFDQAWELMSH-VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFV 171
R + +A L+ +++ P + + +++L K + E + M ER I+
Sbjct: 503 CRKGWLQEARILLYRMLEKGFP--INKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYP 560
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTA 230
+ F L+ ++EA VF+++ + F PNN N L+ G + G VT
Sbjct: 561 D-----AVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTE 615
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
EM +G T+NI IDG+C++G A+ F +M+R+ LP + T LI
Sbjct: 616 ALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIG 675
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G ++ A ++ ++M L PDI YN + R R +N A+ ++D++ I
Sbjct: 676 GYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVP 735
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
D VTY+TM G+ S L+ L ++++ F+P T ML+ FC
Sbjct: 736 DTVTYNTMLSGIC-SDILDRAMILTAKLLKMGFIPNVITTNMLLSHFC 782
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+N T N ++ GF V E H M P VVT+NI I+ C G A+
Sbjct: 245 PSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTWVAIDW 304
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
M R PS+ T TT++H N+ +AR+LFD + + P+ YN ++ +
Sbjct: 305 LHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFK 364
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY-DRMIEGKFVPKTR 388
R++ A L +EM + D VT++ + +G K +E +L D ++ G F+ +
Sbjct: 365 AREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSL 424
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
VM+ C R+D + L L+++G A + L+ G ++AFE + M
Sbjct: 425 YDVMVSS-LCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIM 483
Query: 449 L 449
+
Sbjct: 484 V 484
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/299 (23%), Positives = 133/299 (44%), Gaps = 5/299 (1%)
Query: 137 LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
L++ + + ++ S+ ++ EA+ M R F S N LL C + ++E
Sbjct: 455 LSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTP----SSSTCNSLLMGLCRKGWLQE 510
Query: 197 ARSVFVKLLSRFAPNNKT-MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR + ++L + P NK +LL G+ + ++ + + EM RG P V + ID
Sbjct: 511 ARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALID 570
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
G K G +A +F EM + +P+ +LI G + +A +L EM ++ L
Sbjct: 571 GLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLS 630
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
D +N +I R + A+E +M+ + D T++ + G K+ + G ++
Sbjct: 631 DTFTFNIIIDGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIV 690
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++M P T M +C +++ + + LI G P + +++G+CS
Sbjct: 691 NKMYSCGLDPDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICS 749
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 119/304 (39%), Gaps = 36/304 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +L A C + + EAR +F + APN N L+ G+ ++ +V + Y EM
Sbjct: 320 FTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMR 379
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P VT+NI + G+ K G D+ RL +++ ++ +
Sbjct: 380 TTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLD 439
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIR------------------------------ 329
+A +L E+ ++ L + A+N++I + R
Sbjct: 440 EAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLL 499
Query: 330 ---CRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
CR L A L+ M EK + V Y + G K + LEG L+ M E
Sbjct: 500 MGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIY 559
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P L+ V+ ++ + GF P+ A + L+ GLC GR EA +
Sbjct: 560 PDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKL 619
Query: 445 SKQM 448
K+M
Sbjct: 620 EKEM 623
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 121/306 (39%), Gaps = 40/306 (13%)
Query: 181 FNVLLQAFCTQKEMKEARS-VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ A C A + + + S P+ T +L G+V + +
Sbjct: 285 FNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQ 344
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ YN +DGY K A L+EEM P T L+ G I
Sbjct: 345 DMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIE 404
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +L ++ L D Y+ M+SSL L+ AM+L+ E+ EK + V ++++
Sbjct: 405 DSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSL- 463
Query: 360 FGLMKSSGLE---------------------------GVCK---------LYDRMIEGKF 383
G +GLE G+C+ L RM+E F
Sbjct: 464 IGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGF 523
Query: 384 -VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+ K V+L +F +N ++ LW + +RG P A L+ GL G EEA+
Sbjct: 524 PINKVAYTVLLDGYFKMN-NLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAY 582
Query: 443 ECSKQM 448
E +M
Sbjct: 583 EVFLEM 588
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 67/317 (21%), Positives = 128/317 (40%), Gaps = 40/317 (12%)
Query: 167 REIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
R++F GI+ G + +N L+ + +E+ +A ++ ++ + +P+ T NIL+ G
Sbjct: 337 RKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWG 396
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE--------- 272
+ G + + ++++ G Y++ + C G +AM+L +E
Sbjct: 397 HYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLS 456
Query: 273 --------------------------MERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
M R PS T +L+ G + +AR L
Sbjct: 457 VVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLY 516
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
M ++ + AY ++ + +L A L EM+E+ I D V + + GL K+
Sbjct: 517 RMLEKGFPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAG 576
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+E +++ M FVP L++ C RV L L + +G +
Sbjct: 577 NVEEAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFN 636
Query: 427 LLVTGLCSRGRWEEAFE 443
+++ G C RG+ + A E
Sbjct: 637 IIIDGFCRRGQMKFAIE 653
>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
Length = 1088
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 97/389 (24%), Positives = 164/389 (42%), Gaps = 13/389 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
PT + L M ++ AW L ++ P++ T ++ +S + +
Sbjct: 488 PTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTAL---ISGLCVSGLLKVA 544
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
+ F RM R+ G+ + +N L+ + +K A V + L+ R N T N
Sbjct: 545 IGLFHRMSRD---GVFP-NTVTYNALINILVENRRIKYA-FVVLNLMGRNGLFTNIVTYN 599
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G+ GD + + M+ RG ++VTYN I GYC G A+R+ + M
Sbjct: 600 EMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDG 659
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T LI G + + A LF+EM L P+ Y A+I + L+ A
Sbjct: 660 GCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTA 719
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L++ M+ + TY+ + GL K + G +L MIE P T ++
Sbjct: 720 TSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDG 779
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C N L L ++ +I++G P+ L+ L G+ EEA ++
Sbjct: 780 LCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPD 839
Query: 457 EASY-RMLQRYLVQANANEKLEDLDRMIK 484
E +Y +M++ Y++ L RMIK
Sbjct: 840 EITYVKMIEAYIMSGKVEHAFNFLGRMIK 868
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 117/253 (46%), Gaps = 1/253 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C A R + + P+ + L+ GF + + + ++EMV
Sbjct: 633 YNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMV 692
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTY IDGYCK A L E M+R C P++QT LIHG N
Sbjct: 693 DDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFS 752
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M + + P++ Y AMI L + + A+E+ ++M E+ + +TY ++
Sbjct: 753 GAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLI 812
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + +E L+ + +P T V +++ + ++ +V+ N G +I G
Sbjct: 813 RALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQ 872
Query: 420 PHGHALDLLVTGL 432
P +L+ GL
Sbjct: 873 PTLWTYGVLIKGL 885
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/339 (23%), Positives = 138/339 (40%), Gaps = 36/339 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ C + ++ A VF ++ PN T + L+ G +SG V EM+
Sbjct: 423 YTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 482
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G P+ T I C GC+ DA RLF +M+ C P++ T T LI G + +
Sbjct: 483 LHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLK 542
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCR---------------------------- 331
A LF M + + P+ YNA+I+ L+ R
Sbjct: 543 VAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMI 602
Query: 332 -------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
D AM +M+ M ++ + VTY+T+ G S ++ D M +G
Sbjct: 603 KGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCK 662
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + L+ FC +++ L+ ++D G CP+ L+ G C + + A
Sbjct: 663 PDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSL 722
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
+ M + + +Y +L L + N E+L +++
Sbjct: 723 LEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM 761
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 136/308 (44%), Gaps = 3/308 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ +C + K+A V +L R + N T N ++ G+ +SG+ T+ M
Sbjct: 598 YNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMR 657
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P +Y I G+CK A LF EM P+ T T LI G +
Sbjct: 658 DGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLD 717
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L + M + +P++ YN +I L + + + A EL M E+ I + VTY M
Sbjct: 718 TATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMI 777
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ +++++MIE +P T L++ +V+ NL+ L G
Sbjct: 778 DGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLI 837
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN--ANEKLE 477
P ++ G+ E AF +M+ Q + +Y +L + L A+++L
Sbjct: 838 PDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLA 897
Query: 478 DLDRMIKN 485
L ++ N
Sbjct: 898 ALPDVVPN 905
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/332 (21%), Positives = 124/332 (37%), Gaps = 38/332 (11%)
Query: 189 CTQKEMKEARSVFVKLLSRFAPNNK--TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C KE F+ +LS+ + LL+ G A+ YH M+ G +P+
Sbjct: 325 CHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPN 384
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
++ YN I+ CK G DA + +++ P T T++I G ++ A Q+F+
Sbjct: 385 LLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFN 444
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE------------------------ 342
+M K +P+ Y+ +I+ L +N A +L+ E
Sbjct: 445 QMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMG 504
Query: 343 -----------MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
M+ K + TY + GL S L+ L+ RM P T T
Sbjct: 505 CYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYN 564
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ N R+ + + G + + ++ G C G ++A ML R
Sbjct: 565 ALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624
Query: 452 RRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
+ +Y +++ Y N L LD M
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLM 656
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/273 (21%), Positives = 104/273 (38%), Gaps = 34/273 (12%)
Query: 119 FDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
D A L+ H++R+ P++ T + L++ + F EE + +E IF + +
Sbjct: 716 LDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVM--IEEGIFPNVVTY 773
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFY 235
++ C A +F K++ + PN T + L+ + G V E +
Sbjct: 774 -----TAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLF 828
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---- 291
E+ G P +TY I+ Y G A M + C P+L T LI G
Sbjct: 829 AELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNE 888
Query: 292 -----------AGLVRNIHQARQLFDE-----MPKRNLKPDIG----AYNAMISSLIRCR 331
+V N Q D+ M + + D G NA++S+L
Sbjct: 889 YLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAG 948
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
A EL+ M + + D Y+++ L++
Sbjct: 949 RWFEANELLGSMISQGLCPDQEAYNSLLCSLLR 981
>gi|255660824|gb|ACU25581.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 146/352 (41%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K + L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVIEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ FC + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHXFCKEGEIRLAQSVFDSIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ M G P V TY++ I+G CK+
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 XDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKG 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHXFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M + PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVHPDVYTYSVLINGLCKESKMDDANELFDEMLBNGLVPNXV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAHDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ + + +Y L L Q +
Sbjct: 303 SMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 4/309 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDXYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T I+ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHXFCKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L M+ + D TY
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P + L+ GLC +G ++A + +M ++ + + +Y ++ + +
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETA 330
Query: 476 LEDLDRMIK 484
E RMIK
Sbjct: 331 FEYRKRMIK 339
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 101/255 (39%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L S +Q + HP + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVHPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E FD M V F L+ C + A ++ ++LS+ P+ T N
Sbjct: 226 NELFDEMLBNGLVP----NXVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G + GD+ EM ++G +P +TY N
Sbjct: 282 LIYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGXCKEGDLETAFEYRKRMIKEN 341
Query: 252 IR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 342 IRXDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEXCKKGDVWTGS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P++
Sbjct: 402 KLLKEMQRXGYVPNV 416
Score = 42.7 bits (99), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 48/105 (45%), Gaps = 1/105 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +++ A +++ ++ L+ G + G E EM+
Sbjct: 314 YTTLIDGXCKEGDLETAFEYRKRMIKENIRXDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +P + TY + I+ CKKG +L +EM+R +P++ T
Sbjct: 374 SVGLKPEIGTYTMIINEXCKKGDVWTGSKLLKEMQRXGYVPNVVT 418
>gi|255660778|gb|ACU25558.1| pentatricopeptide repeat-containing protein [Verbena bracteata]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
gi|194700420|gb|ACF84294.1| unknown [Zea mays]
gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
Length = 598
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/308 (24%), Positives = 147/308 (47%), Gaps = 5/308 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LLQA C + ++A + + + PNN T N+++ GDV + +
Sbjct: 201 YNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLP 260
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +P+ V YN + G+C + DA + +EM R C P+ T+ +I+ +
Sbjct: 261 SRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQ 320
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ ++M K ++ YNA+IS + ++++A+EL+ M+ D VTY+T+
Sbjct: 321 KVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVL 380
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + E +L +M + +P T ++ F+C + ++ + ++G
Sbjct: 381 KGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCN 440
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ ++ GL G+ E+A E +M + ++ YR+L L N +K+E++
Sbjct: 441 PNSTTYSTIIGGLTKAGKMEQALELLNEM-ANKGFNTDKMYRVLTESL---NKEDKIEEV 496
Query: 480 DRMIKNLQ 487
+++ LQ
Sbjct: 497 VQVVHKLQ 504
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 163/374 (43%), Gaps = 19/374 (5%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
+ALE F ++ P + + + R DQA EL++ + + P+ + ++
Sbjct: 216 QALELIDF-MRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTV 274
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I ++ +E L D M RE NV++ C +K + + ++++
Sbjct: 275 LKGFCSIERWVDADEIL---DEMVRENC----PPNEATLNVIINTLC-RKGLLQKVTLYL 326
Query: 203 KLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
+ +S+ N T N ++ G E G+V + M G +P +VTYN + G C
Sbjct: 327 EKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSA 386
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+ DA L +M + LP T T+I I QA ++F +MP++ P+ Y
Sbjct: 387 DRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTY 446
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ +I L + + A+EL++EM K D + Y + L K +E V ++ ++ +
Sbjct: 447 STIIGGLTKAGKMEQALELLNEMANKGFNTDKM-YRVLTESLNKEDKIEEVVQVVHKLQD 505
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P+T ++ C N + D +++ ++ G P +L+ GL G +E
Sbjct: 506 SGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKE 565
Query: 441 AFE-----CSKQML 449
A E CS+ +L
Sbjct: 566 ARELLSRLCSRDVL 579
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 120/290 (41%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C +++AR V + + A + N L+ E G V + M+
Sbjct: 131 YGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGML 190
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P VVTYNI + CK + A+ L + M C P+ T +I ++
Sbjct: 191 CRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVD 250
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QAR+L + +P R KP+ YN ++ A E++DEM + + T + +
Sbjct: 251 QARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVII 310
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + L+ V ++M + T ++ C VD L L + G
Sbjct: 311 NTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCK 370
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P + ++ GLCS RWE+A E +M R +++ + + Q
Sbjct: 371 PDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/367 (21%), Positives = 153/367 (41%), Gaps = 13/367 (3%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
PD + L + R + QA EL+ + P+ +T + + R E
Sbjct: 195 APDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARE 254
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMN 216
L + K + +N +L+ FC+ + +A + +++ PN T+N
Sbjct: 255 LLNSLPSRGC-------KPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLN 307
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
+++ G + + ++ +M G +VVTYN I G C++G A+ L M+
Sbjct: 308 VIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSF 367
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P + T T++ G A +L +M + + PD +N +IS + + A
Sbjct: 368 GCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQA 427
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
E+ +M EK ++ TY T+ GL K+ +E +L + M F + +L +
Sbjct: 428 FEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGF-NTDKMYRVLTES 486
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+++ + + L D G P + ++ GLC G+ + A + M+
Sbjct: 487 LNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPD 546
Query: 457 EASYRML 463
E++Y +L
Sbjct: 547 ESTYIIL 553
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G + TY +DGYC+ G DA R+ M S LIH + A
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ D M R PD+ YN ++ + + R A+EL+D M + +NVTY+ +
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVIIDA 242
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+ + ++ +L + + P T ++K FC R + ++ P+
Sbjct: 243 MCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPPN 302
Query: 422 GHALDLLVTGLCSRG 436
L++++ LC +G
Sbjct: 303 EATLNVIINTLCRKG 317
>gi|255660788|gb|ACU25563.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 418
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 131/313 (41%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D MI+ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMIDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMIDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/255 (21%), Positives = 104/255 (40%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E FD M I G+ G F L+ C + A ++ ++LS+ +P+ T N
Sbjct: 226 NELFDEM---IDNGLVPNGVT-FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G + GD+ + EM ++G +P +TY N
Sbjct: 282 LIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKEN 341
Query: 252 IR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 342 IRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|414587035|tpg|DAA37606.1| TPA: hypothetical protein ZEAMMB73_100135 [Zea mays]
Length = 547
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 152/322 (47%), Gaps = 6/322 (1%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L AH A+ F+ +Q ++P +F + + RM F +A EL+ +
Sbjct: 183 NYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALELVERMT 242
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
S T+ + +I++ + + + + E R++R+ G+ + + ++ +C
Sbjct: 243 EFGCSPDTI-THNILVDGLCRAKQVNKGHEVLRRLQRD---GVCMPNAVTYTSVISGYCK 298
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+M++A SV+ +L S PN T N+L+ G+ ++ D+ + Y +++LR P VVT
Sbjct: 299 AGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVT 358
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
++ IDGYC+ G DA R+++EM P++ T + +IH +A + E+
Sbjct: 359 FSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELN 418
Query: 310 KR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
R ++ P YN +I L + ++ A ++ +M+EK D TY + G +
Sbjct: 419 MRTDIAPQTFIYNPVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRI 478
Query: 369 EGVCKLYDRMIEGKFVPKTRTV 390
L+ +M+E P TV
Sbjct: 479 PEAITLFHKMVEAGCRPDNITV 500
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 13/298 (4%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNI 217
+A E I G+ FNV+++ C ++A + V+ ++ F +P+ T NI
Sbjct: 197 DAVALFESWIQDGLYSPDVWSFNVVIKGVCRMGNFQKALEL-VERMTEFGCSPDTITHNI 255
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFR-----PSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
L+ G + V HE++ R R P+ VTY I GYCK G DAM ++ +
Sbjct: 256 LVDGLCRAKQVNKG----HEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYND 311
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M P+ T LI+G G ++ A +++ ++ R+ PD+ ++++I RC
Sbjct: 312 MLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQ 371
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS-GLEGVCKLYDRMIEGKFVPKTRTVV 391
L+ A + EM I + T+ + L K + E + L + + P+T
Sbjct: 372 LDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYN 431
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
++ C +VD + + ++G P + +L+ G C +GR EA +M+
Sbjct: 432 PVIDILCKGGKVDEANLIVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMV 489
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/333 (21%), Positives = 151/333 (45%), Gaps = 19/333 (5%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKE 196
S ++++ + + ++++ LE +RM +FG N+L+ C K++ +
Sbjct: 217 SFNVVIKGVCRMGNFQKALELVERMT--------EFGCSPDTITHNILVDGLCRAKQVNK 268
Query: 197 ARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
V +L PN T ++ G+ ++G + Y++M+ G RP+ VTYN+ I
Sbjct: 269 GHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLI 328
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+GY K A+R++ ++ C P + T ++LI G + A++++ EM +++
Sbjct: 329 NGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQ 388
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHTMFFGLMKSSGLEGVCK 373
P++ ++ +I SL + A++++ E+ + I Y+ + L K ++
Sbjct: 389 PNVYTFSIIIHSLCKQNRSAEALDILRELNMRTDIAPQTFIYNPVIDILCKGGKVDEANL 448
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
+ M E P T +L+ C+ R+ + L+ +++ G P ++ V+ +
Sbjct: 449 IVTDMKEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVEAGCRPDNITVNSFVSCVL 508
Query: 434 SRGRWEEAFE----CSKQMLVRRRQVSEASYRM 462
G E + S L ++ S+ S R+
Sbjct: 509 KAGMPNEVDQIMLIASGHGLASQKVSSQQSRRL 541
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/278 (20%), Positives = 118/278 (42%), Gaps = 10/278 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA------PNNKTMNILLLGFKESGDVTAMEMF 234
F + CT + +A S + SR N +N L+ + V E +
Sbjct: 146 FFSFVAGSCTNAGLLDAASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESW 205
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ + + P V ++N+ I G C+ G F A+ L E M C P T L+ G
Sbjct: 206 IQDGL---YSPDVWSFNVVIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCR 262
Query: 295 VRNIHQARQLFDEMPKRNL-KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ +++ ++ + + + P+ Y ++IS + + AM + ++M E + V
Sbjct: 263 AKQVNKGHEVLRRLQRDGVCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTV 322
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ + G K+ +E ++Y ++I P T L+ +C ++D +W +
Sbjct: 323 TYNVLINGYGKALDMESAVRMYRQLILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEM 382
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P+ + +++ LC + R EA + +++ +R
Sbjct: 383 GLHHIQPNVYTFSIIIHSLCKQNRSAEALDILRELNMR 420
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/322 (20%), Positives = 139/322 (43%), Gaps = 6/322 (1%)
Query: 178 SEEFNVLLQAF-CTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMF 234
SE+ + + AF C ++A +F +++ S + P + + +G + A
Sbjct: 107 SEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGLLDAASTL 166
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE-MERVACLPSLQTITTLIHGAG 293
+ G YN ++ G DA+ LFE ++ P + + +I G
Sbjct: 167 LTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFESWIQDGLYSPDVWSFNVVIKGVC 226
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN- 352
+ N +A +L + M + PD +N ++ L R + +N E++ ++ + N
Sbjct: 227 RMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDGVCMPNA 286
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY ++ G K+ +E +Y+ M+E P T T +L+ + ++ + ++
Sbjct: 287 VTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQ 346
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
LI R P L+ G C G+ ++A K+M + Q + ++ ++ L + N
Sbjct: 347 LILRHCPPDVVTFSSLIDGYCRCGQLDDAKRIWKEMGLHHIQPNVYTFSIIIHSLCKQNR 406
Query: 473 NEKLEDLDRMIKNLQAVLPPPT 494
+ + D+ R + N++ + P T
Sbjct: 407 SAEALDILREL-NMRTDIAPQT 427
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 98/227 (43%), Gaps = 13/227 (5%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEE-MERVACLPS---LQTITTLIHGAGLVRNIHQ 300
PS +Y I C+ G DA++LF++ M++ LP + AGL +
Sbjct: 106 PSEQSYIHVIAFLCRSGRHRDALKLFDQMMDQSGYLPEAGFFSFVAGSCTNAGL---LDA 162
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLI---RCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A L + + + AYN +++SLI R +D A E +++ D +++
Sbjct: 163 ASTLLTKGSRLGCCIEPYAYNYLLNSLIAHGRAQDAVALFE--SWIQDGLYSPDVWSFNV 220
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G+ + + +L +RM E P T T +L+ C +V+ G + L G
Sbjct: 221 VIKGVCRMGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNKGHEVLRRLQRDG 280
Query: 418 FC-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C P+ +++G C G+ E+A ML + + +Y +L
Sbjct: 281 VCMPNAVTYTSVISGYCKAGKMEDAMSVYNDMLESGTRPNTVTYNVL 327
>gi|410109921|gb|AFV61040.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
filifolia]
Length = 431
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 155/352 (44%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T ++ P D K L L +++YF W + + +P+ +L +I
Sbjct: 91 AIECYRLTRENKLCVPF-DTCRKVLEHLMKLKYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
L S P+ T ++L+ G + + + EM+++ P+ VT+ IDG+CK
Sbjct: 200 KSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T TLI+G ++ QA L DEM + L+PD
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKIT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+ A E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P RT M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLKPDARTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 134/285 (47%), Gaps = 38/285 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L+ FC +++ A+SVF ++++ P+ + N L+ G+ GD+ M
Sbjct: 145 FNILMHRFCKDGDIRVAQSVF-DAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAM 203
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G +P V TY++ I+G CK+ DA +LF+EM A +P+ T TTLI G +
Sbjct: 204 LASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGVTFTTLIDGHCKNGRV 263
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +++ +M ++L PD+ YN +I L + DL A +L+DEM K + D +TY T+
Sbjct: 264 DLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEMSMKGLQPDKITYTTL 323
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K L+ + RMI+ N R+D
Sbjct: 324 IDGCCKEGDLDTAFEHRKRMIQE------------------NIRLD-------------- 351
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
A L++GLC GR +A + ++ML + +Y M+
Sbjct: 352 ---DVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPDARTYTMI 393
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/263 (23%), Positives = 125/263 (47%), Gaps = 4/263 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A +L DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSAMLASGVQPDVYTYSVLINGLCKENKMDDANKLFDEMLVKALVPNGV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNTLIYGLCKKGDLKQANDLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ ++ + +Y L L Q
Sbjct: 309 SMKGLQPDKITYTTLIDGCCKEGDLDTAFEHRKRMIQENIRLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAV-LPPPTR 495
+ D ++M++ + +V L P R
Sbjct: 367 -RSVDAEKMLREMLSVGLKPDAR 388
>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
Length = 577
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/423 (20%), Positives = 189/423 (44%), Gaps = 21/423 (4%)
Query: 57 HLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARM 116
+L P + +LG LFA + A+ FK ++ P + ++ L++
Sbjct: 123 YLKTGIPFNVVTFNTLLGGLFA-ENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKR 181
Query: 117 RYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE-----I 169
+ ++ L+ +++ T P + ++ SI++ + K + + + + M+++ I
Sbjct: 182 GHTEKTLSLLRIMEQGNTKPDV---RTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNI 238
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDV 228
F +N L+ C + ++ +++ ++++ PN T +IL+ G + G V
Sbjct: 239 FT---------YNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKV 289
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+ M+ +G P ++TY+ +DGYC +G A R+F + P++ + + L
Sbjct: 290 EDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSIL 349
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G +N+ +A QLF E+ ++ LKPD Y+ ++ LI + A ++ DEM
Sbjct: 350 INGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGP 409
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D + T+ FG K +E L+ ++ + +++ C N RV
Sbjct: 410 TPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHA 469
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
++ L G P ++++TG C G ++E ++M + +Y ++ +
Sbjct: 470 IFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFF 529
Query: 469 QAN 471
++N
Sbjct: 530 RSN 532
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/234 (22%), Positives = 104/234 (44%), Gaps = 36/234 (15%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ +C + ++ AR VF L + PN + +IL+ G+ + ++ + E+
Sbjct: 311 YSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEIS 370
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
+G +P VTY+ + G + G GDA ++F+EM RV P + +TL+ G
Sbjct: 371 QKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVE 430
Query: 292 -------------------------AGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMI 324
GL +N + +A +F+++P L PD+ YN MI
Sbjct: 431 EAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMI 490
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
+ R + ++ +ME+ +N+TY+ + G +S+ + + M
Sbjct: 491 TGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEM 544
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/298 (19%), Positives = 105/298 (35%), Gaps = 57/298 (19%)
Query: 31 SEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFF 90
+++R R+ N D+ + P + + ++L + N KA++ F
Sbjct: 322 GQVDRARRVFN--VLRDKGIKPNIFSY-------------SILINGYCKKKNLAKAMQLF 366
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
+ P + LH L + A ++ + R P+ + S +L
Sbjct: 367 G-EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP-DICLHSTLLFGYF 424
Query: 151 KFQSYEETLEAFDRMEREIFVGIRKFGSEEF-NVLLQAFCTQKEMKEARSVFVKLLSRFA 209
K+ EE + F ++ER R+ + F V++ C ++EA ++F KL S
Sbjct: 425 KYGLVEEAMLLFSKLERN-----REDTNISFYTVVINGLCKNDRVREAHAIFEKLPSI-- 477
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
G P V TYN+ I G+C++G F + +
Sbjct: 478 --------------------------------GLIPDVRTYNVMITGFCREGLFDEVKGI 505
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+ME C + T ++ G I + EM R D +I+ L
Sbjct: 506 LRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVL 563
>gi|218188821|gb|EEC71248.1| hypothetical protein OsI_03217 [Oryza sativa Indica Group]
Length = 571
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 14/314 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+ + +L A + ARS+ + + FAP T N+L+ K A+ +
Sbjct: 138 ARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLV---KAHCSDAAVPIDDA 194
Query: 237 EMVLRGF-RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
V R +P +YN IDG C++G +A LF EM P++ T TTLIH
Sbjct: 195 VRVFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLARE 254
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
A +LFDEM +R + P++ Y+++I L + +A+EL+D M ++R + +TY
Sbjct: 255 ACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITY 314
Query: 356 HTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ GL K L ++ DRM ++G+ P L+ C R N +
Sbjct: 315 SSVIDGLCKEGCLGQAMEILDRMRLQGR-KPDAGLFGKLIVGLCDAGRALEASNYLDEMN 373
Query: 415 DRGFCP-------HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
G P HG D +VT LCS+G AF+ + M R ++ +L L
Sbjct: 374 FAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECL 433
Query: 468 VQANANEKLEDLDR 481
+ N EK + R
Sbjct: 434 SKKNNLEKAAHVVR 447
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 43/272 (15%)
Query: 169 IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD 227
+F I K + +N ++ C + + EAR +F ++++ AP T L+
Sbjct: 197 VFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 256
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ EM RG P+VVTY+ IDG CK G A+ L + M + LP+ T ++
Sbjct: 257 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 316
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY--------------------------- 320
+I G + QA ++ D M + KPD G +
Sbjct: 317 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 376
Query: 321 ---------------NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+A++++L ++ A ++ M + I T+H + L K
Sbjct: 377 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKK 436
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ LE + M+ + +P+ T +++ +
Sbjct: 437 NNLEKAAHVVRDMLSERCIPERETWDTIVRAY 468
>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
Length = 1056
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/403 (24%), Positives = 168/403 (41%), Gaps = 35/403 (8%)
Query: 110 LHILARMRYFDQAW---ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
L L ++R +A+ ELM + P+++T S ++ + + E ++RM
Sbjct: 352 LKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTF---STLIQGLCNAGRVNQAWEVYERMV 408
Query: 167 REIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR------------------- 207
+ +F + LL+ C + + F ++L R
Sbjct: 409 AVEGISPNRF---TYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLM 465
Query: 208 ---FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P T N L+ G +SG V M+ G P V+T+N +DG CK+
Sbjct: 466 VQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRIL 525
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA +F+ C P++ T +TLI G + + +A QL +M + + + Y+ ++
Sbjct: 526 DAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVV 585
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L++ + A+ ++ +M + D VTY+T+ G K L L M+E F
Sbjct: 586 DGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFH 645
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L C + R D + + Y+ RG P+ +V GLC GR EA
Sbjct: 646 PSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGY 705
Query: 445 SKQMLVRRRQVSE--ASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
++M R V+ +Y L L +A +E E L+RMI+
Sbjct: 706 FEKM-ARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIR 747
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 150/357 (42%), Gaps = 44/357 (12%)
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
VQ P+L+T ++ LS+ + +A +E I G+ FN +L
Sbjct: 466 VQVCRPTLVTYNTLVTGLSKSGMVR------DALGLLEFMIESGLSP-DVITFNSVLDGL 518
Query: 189 CTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++ + +A +VF + L R PN T + L+ G + + +MV G R +
Sbjct: 519 CKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANT 578
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTY+ +DG K G DA+ + +M CLP T TLI G + + +A L E
Sbjct: 579 VTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLRE 638
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK--- 364
M + P + Y + L R + A+E++D M + + +TY ++ GL K
Sbjct: 639 MLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGR 698
Query: 365 ------------------------SSGLEGVCK---------LYDRMIEGKFVPKTRTVV 391
S+ ++G+CK +RMI +P T
Sbjct: 699 VTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFS 758
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+L+ C R+D GL L+ + +RG +A + ++ C +G + A+ ++M
Sbjct: 759 ILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEM 815
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 100/417 (23%), Positives = 175/417 (41%), Gaps = 30/417 (7%)
Query: 74 GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QR 131
GR+ A + KA++F F PT + + L R D+ +L+ + +
Sbjct: 15 GRVCDAFTAFRKAIQF--------GFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
P+ +T ++ ++ EAF +ER G F ++++ C +
Sbjct: 67 CAPNAVTYNTL------VNALLGQGRAKEAFSLLERMAANGCPP-ELITFGLIIKGLCKE 119
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
E++ A V +++ R F P+ + +LL E G V F+ +++L GF P VTY
Sbjct: 120 GEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTY 179
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N +DG K G A + + + P++ T T + G N+ A + FD MP+
Sbjct: 180 NTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQ 239
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ P+ Y+A+I L + L+ A+ L+ +K + ++ GL ++ LE
Sbjct: 240 TGVSPNTVTYDALIDGLCKAGKLDIALGLL---RDKNSQAGMFAFSSLLHGLCQAHRLEE 296
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+L M VP LM C RVD L+ + + G ++L+
Sbjct: 297 AIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSE---ASYRMLQRYLVQAN-ANEKLEDLDRMI 483
GLC R EA+ L+RR + ++ L + L A N+ E +RM+
Sbjct: 354 GLCKLRRIPEAYR--HVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 151/349 (43%), Gaps = 13/349 (3%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P+ + H L R FD+A E++ ++ + P+ +T S ++ + K
Sbjct: 644 FHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS---IVDGLCKAGRVT 700
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
E L F++M R+ V ++ L+ C + EA +++ + P+ T
Sbjct: 701 EALGYFEKMARDEVVAPHVIA---YSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF 757
Query: 216 NILLLGFKESGDV-TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
+IL+ G ++G + T +E+F M RG + + YN I+ YC KG F A L EEM+
Sbjct: 758 SILINGLCDAGRIDTGLELFCG-MAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMK 816
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ T +I I +A F +P+ + + +I +YN +I+SL+ R
Sbjct: 817 THGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE-DCRDEI-SYNTLITSLVASRRSE 874
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+EL+ M D Y T+ GL K+ E KL M P RT +++
Sbjct: 875 QALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMI 934
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
++ L + + ++ + P L+ C + ++A++
Sbjct: 935 SGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWK 983
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 90/195 (46%)
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+VTYN+ I+G CK G DA F + + P++ T +T+I G + + +L +
Sbjct: 1 MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R P+ YN ++++L+ A L++ M + +T+ + GL K
Sbjct: 61 EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
+E ++ D M++ FVP +L+ C RVD + ++ GF P +
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180
Query: 427 LLVTGLCSRGRWEEA 441
+V GL GR E A
Sbjct: 181 TMVDGLYKAGRLEAA 195
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 123/311 (39%), Gaps = 41/311 (13%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N+L+ G ++G V + + + GFRP+VVTY+ IDG C+ +L EEM
Sbjct: 3 TYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEM 62
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P+ T TL++ +A L + M P++ + +I L + ++
Sbjct: 63 AGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEI 122
Query: 334 NAAMELMDEMEEKR---------------------------------IGH--DNVTYHTM 358
AA ++DEM ++ IG D VTY+TM
Sbjct: 123 EAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTM 182
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ LE + + E P T + + + + + G
Sbjct: 183 VDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGV 242
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED 478
P+ D L+ GLC G+ + A + + Q ++ L L QA+ +LE+
Sbjct: 243 SPNTVTYDALIDGLCKAGKLDIALGLLRD---KNSQAGMFAFSSLLHGLCQAH---RLEE 296
Query: 479 LDRMIKNLQAV 489
+++K + V
Sbjct: 297 AIQLLKAMPCV 307
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 106/252 (42%), Gaps = 36/252 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ ++ A V L F+ P T I + G ++G++T F+ M
Sbjct: 179 YNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMP 238
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE--------------------------- 272
G P+ VTY+ IDG CK G A+ L +
Sbjct: 239 QTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAI 298
Query: 273 --MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
++ + C+P++ +L++G R + +A +LFD M + D+ YN ++ L +
Sbjct: 299 QLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKL 358
Query: 331 RDLNAA---MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + A +ELM E + VT+ T+ GL + + ++Y+RM+ + +
Sbjct: 359 RRIPEAYRHVELMRRTEG--CSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPN 416
Query: 388 R-TVVMLMKFFC 398
R T L++ C
Sbjct: 417 RFTYAFLLEGLC 428
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/365 (20%), Positives = 138/365 (37%), Gaps = 54/365 (14%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
+AL +F+ + P A+ + L + D+A+E + + R P ++T
Sbjct: 701 EALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTF--- 757
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEAR 198
SI+++ + + LE +F G+ + G + +N ++ A+C + E A
Sbjct: 758 SILINGLCDAGRIDTGLE--------LFCGMAERGCKADIYAYNAMINAYCLKGEFSAAY 809
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE-------------------- 237
++ ++ + A N T I++ + + ++H
Sbjct: 810 ALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDEISYNTLITSLVA 869
Query: 238 -------------MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
MV G P Y +DG K G A +L +EM P L+T
Sbjct: 870 SRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRT 929
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
T +I G + + A F+EM ++NLKPD Y+++I + + ++ A +L +
Sbjct: 930 YTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKL---LR 986
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
I Y TM L K+ G + ++ M P L + RVD
Sbjct: 987 SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVD 1046
Query: 405 LGLNL 409
+ L
Sbjct: 1047 EAVKL 1051
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 44/96 (45%)
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+ + GL K+ + + + I+ F P T ++ C + VD G L
Sbjct: 2 VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ RG P+ + LV L +GR +EAF ++M
Sbjct: 62 MAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97
>gi|359492929|ref|XP_002283907.2| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Vitis vinifera]
Length = 513
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/444 (23%), Positives = 191/444 (43%), Gaps = 51/444 (11%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL----------KALEFFKFTLQ 95
P Q L+ T + P T ++T+VE F +H + + +ALE F +
Sbjct: 26 PLQYLNATSPKPDPPATEATTTMVEPRKKPKFISHESAINLIKRETDPQRALEIFNRVAE 85
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI-MLSRISKFQS 154
F+ + LH LA+ + F QA + + H Q T+ + + + + ++ SK
Sbjct: 86 QRGFSHNNATYATILHKLAKSKKF-QAIDAVLH-QMTYETCKFHEGIFLNLMKHFSKLSL 143
Query: 155 YEETLEAFDR----------------------------MEREIFVGIRKFGSEE-----F 181
+E +E FD + R+ + +K + E F
Sbjct: 144 HERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKSLNLEPNTCIF 203
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+L++ C ++ A V ++ PN T + L+ G SG + + EMV
Sbjct: 204 NILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLKEAIELFEEMV 263
Query: 240 LRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ P +TYN I+G+C A+++ E M++ C P++ + L++G +
Sbjct: 264 SKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSALMNGFCKEGRL 323
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A+++FDEM LKPD Y +I+ R ++ AMEL+ +M E + D VT++ +
Sbjct: 324 EEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTVTFNVI 383
Query: 359 FFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
GL + E + +R+ EG ++ K ++L C + L G ++ RG
Sbjct: 384 LGGLCREGRFEEARGMLERLPYEGVYLNKASYRIVLNS-LCREGELQKATQLVGLMLGRG 442
Query: 418 FCPHGHALDLLVTGLCSRGRWEEA 441
PH + L+ LC G+ +A
Sbjct: 443 VLPHFATSNELLVHLCEAGKVGDA 466
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 133/298 (44%), Gaps = 35/298 (11%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK--KGCFGD 265
F+ NN T +L +S A++ H+M TY CK +G F +
Sbjct: 89 FSHNNATYATILHKLAKSKKFQAIDAVLHQM----------TYET-----CKFHEGIFLN 133
Query: 266 AMRLFEEM---ERVACL-----------PSLQTITTLIHGAGLVRNIHQARQ-LFDEMPK 310
M+ F ++ ERV + PSL+ I+T ++ + R+ L +
Sbjct: 134 LMKHFSKLSLHERVVEMFDAIRPIVREKPSLKAISTCLNLLVESNQVDLTRKFLLNSKKS 193
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN-VTYHTMFFGLMKSSGLE 369
NL+P+ +N ++ + D+++A E+++EM++ + + N +TY T+ GL S L+
Sbjct: 194 LNLEPNTCIFNILVKHHCKNGDIDSAFEVVEEMKKSHVSYPNLITYSTLINGLCGSGRLK 253
Query: 370 GVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+L++ M+ + + +P T L+ FC +VD L + ++ G P+ L
Sbjct: 254 EAIELFEEMVSKDQILPDALTYNALINGFCHGEKVDRALKIMEFMKKNGCNPNVFNYSAL 313
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMIKN 485
+ G C GR EEA E +M + Y L + +A +E +E L M +N
Sbjct: 314 MNGFCKEGRLEEAKEVFDEMKSLGLKPDTVGYTTLINFFCRAGRVDEAMELLKDMREN 371
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 35/174 (20%), Positives = 79/174 (45%), Gaps = 6/174 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P + ++ R D+A EL+ ++ T+ + +++L + + +EE
Sbjct: 340 PDTVGYTTLINFFCRAGRVDEAMELLKDMRENKCRADTV-TFNVILGGLCREGRFEE--- 395
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
A +ER + G+ + ++L + C + E+++A + +L R P+ T N LL
Sbjct: 396 ARGMLERLPYEGVY-LNKASYRIVLNSLCREGELQKATQLVGLMLGRGVLPHFATSNELL 454
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ E+G V M ++ GF+P ++ + ++ C++ A L +++
Sbjct: 455 VHLCEAGKVGDAVMALLGLLELGFKPEPNSWALLVELICRERKLLPAFELLDDL 508
>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Glycine max]
Length = 756
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 104/457 (22%), Positives = 190/457 (41%), Gaps = 42/457 (9%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
PL + L L + AL F++ P+++ P F + L LAR FD
Sbjct: 52 PLPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSVFHELLRQLARAGSFDSM 111
Query: 123 WELMSHVQRTHPSLLTLKSMSIML---SRISKFQSYEETLEAFDRMERE----------- 168
L+ ++ H S + + + ++ + + + E F MER+
Sbjct: 112 LTLL---RQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPDTRFYN 168
Query: 169 ----IFVGIRKFGSEE-----------------FNVLLQAFCTQKEMKEARSVFVKLLSR 207
+ V K E FN+L++A C +++ A + + +
Sbjct: 169 VALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNY 228
Query: 208 -FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
P+ KT L+ GF E DV MV G + V+ N+ ++G CK+G +A
Sbjct: 229 GLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEA 288
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+R E E P T L++G +I Q ++ D M ++ + D+ YN++IS
Sbjct: 289 LRFIYEEEGFC--PDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISG 346
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + +++ A+E++ M + + VTY+T+ L K + +E +L + +P
Sbjct: 347 LCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPD 406
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L++ C+ ++ + L+ + ++G P +L+ LCS R +EA K
Sbjct: 407 VCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLK 466
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRM 482
+M + + Y L L + N ED+ D+M
Sbjct: 467 EMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQM 503
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 1/262 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C E+ EA + ++SR PN T N L+ + V A +
Sbjct: 340 YNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLT 399
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V T+N I G C AM LFEEM+ C P T + LI R +
Sbjct: 400 SKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLK 459
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM ++ YN +I L + + A ++ D+ME + +VTY+T+
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLI 519
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS +E +L D+MI P T ++K+FC + ++ + G
Sbjct: 520 NGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCE 579
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P L+ GLC GR + A
Sbjct: 580 PDIVTYGTLIGGLCKAGRVDVA 601
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 172/408 (42%), Gaps = 12/408 (2%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLS 147
E +F + F P F ++ L R + Q E+M + L + + + ++S
Sbjct: 287 EALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFEL-DVYTYNSLIS 345
Query: 148 RISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS 206
+ K +E +E M R+ + + +N L+ C + ++ A + L S
Sbjct: 346 GLCKLGEIDEAVEILHHMVSRDC-----EPNTVTYNTLIGTLCKENHVEAATELARVLTS 400
Query: 207 R-FAPNNKTMNILLLGFK-ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+ P+ T N L+ G S AME+F EM +G P TY+I I+ C +
Sbjct: 401 KGVLPDVCTFNSLIQGLCLTSNREIAMELF-EEMKEKGCDPDEFTYSILIESLCSERRLK 459
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ L +EME C ++ TLI G + A +FD+M + YN +I
Sbjct: 460 EALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLI 519
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L + + + A +LMD+M + + D TY TM + ++ + M
Sbjct: 520 NGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCE 579
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ C RVD+ L + +G A + ++ LC R R +EA
Sbjct: 580 PDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRL 639
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQ-AVLP 491
++M+ + +Y+++ R L + E +D ++ L+ +LP
Sbjct: 640 FREMMEKGDPPDVITYKIVFRGLCNGGGPIQ-EAVDFTVEMLEKGILP 686
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 103/239 (43%), Gaps = 2/239 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + +A +F ++ + + ++ T N L+ G +S V +M+
Sbjct: 480 YNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQMI 539
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G +P TY + +C++G A + + M C P + T TLI G +
Sbjct: 540 MEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVD 599
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + + + AYN +I +L + + AM L EM EK D +TY +F
Sbjct: 600 VASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKIVF 659
Query: 360 FGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
GL G ++ M+E +P+ + L + C D + L ++++G
Sbjct: 660 RGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/231 (21%), Positives = 99/231 (42%), Gaps = 40/231 (17%)
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
LV +H ++ + D +P PD+ +N +I +L + L A+ ++++M + D
Sbjct: 182 LVETLH-SKMVADAVP-----PDVSTFNILIRALCKAHQLRPAILMLEDMPNYGLRPDEK 235
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEG-------------------------------- 381
T+ T+ G ++ + +EG ++ + M+E
Sbjct: 236 TFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALRFIYEE 295
Query: 382 -KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
F P T L+ C + GL + +++++GF + + L++GLC G +E
Sbjct: 296 EGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDE 355
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
A E M+ R + + +Y L L + N E +L R++ + + VLP
Sbjct: 356 AVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTS-KGVLP 405
>gi|255660802|gb|ACU25570.1| pentatricopeptide repeat-containing protein [Glandularia
microphylla]
Length = 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 151/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/309 (22%), Positives = 131/309 (42%), Gaps = 4/309 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF ++L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAEILETKGTQTSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RV L + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVVLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P + L+ GLC +G ++A + +M ++ + + +Y ++ + +
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 476 LEDLDRMIK 484
LE RMIK
Sbjct: 331 LEYRKRMIK 339
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ + ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E A E K+M+ ++ + +Y L L Q +
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVVLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETALEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYVPSV 416
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGSCKEGDLETALEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYVPSVVT 418
>gi|255542424|ref|XP_002512275.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548236|gb|EEF49727.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 532
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 138/281 (49%), Gaps = 6/281 (2%)
Query: 168 EIFVGIRKFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLG 221
E+F ++ FG +N L+ C E+ A + ++ SR +P+ T ++ G
Sbjct: 219 ELFNAMQSFGCLPDVVTYNTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISG 278
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
F++ G + A + + EM+ G P+VVT+N+ IDG+ K G A + E+M +C+P
Sbjct: 279 FRKLGKLEAASVLFEEMIRSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPD 338
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ T T+LI G +I +++D M RN+ P+I Y+ +I++L + ++ A +L+
Sbjct: 339 VVTFTSLIDGYCRTGDIRLGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLR 398
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
+++ + Y+ + G K+ ++ + M E + P T +L+ C+
Sbjct: 399 QLKCSDVFPKPFIYNPVIDGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTILIIGHCMKG 458
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
R+ L+++ ++ G P + LV L G+ EAF
Sbjct: 459 RMVEALDIFKKMLAIGCAPDNITISSLVACLLKAGKPSEAF 499
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 90/394 (22%), Positives = 170/394 (43%), Gaps = 10/394 (2%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR 131
V+ RL GLK +EF + H T +E + L +M D E++ R
Sbjct: 65 VIKRLNNNPQVGLKFMEFCRLNFSLIHCFST---YELLIRSLCQMGLHDLV-EMVIGYMR 120
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
+ L+ + + +++ ++ ++ + ++ E + S +N LL
Sbjct: 121 SDGHLIDSRVLGFLVTSFAQAGKFDLAKKLIIEVQGEE----ARISSFVYNYLLNELVKG 176
Query: 192 KEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ EA +F + L+ +P N T NIL+ G G+V ++ M G P VVTY
Sbjct: 177 GKVHEAIFLFKENLAFHSPPNTWTFNILIRGLCRVGEVEKGFELFNAMQSFGCLPDVVTY 236
Query: 251 NIRIDGYCKKGCFGDAMRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
N I G CK A L +E++ R C P + T T++I G + + A LF+EM
Sbjct: 237 NTLISGLCKANELDRACDLLKEVQSRNDCSPDVMTYTSIISGFRKLGKLEAASVLFEEMI 296
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ ++P + +N +I + ++ AA + ++M D VT+ ++ G ++ +
Sbjct: 297 RSGIEPTVVTFNVLIDGFGKIGNMVAAEAMHEKMASYSCIPDVVTFTSLIDGYCRTGDIR 356
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
K++D M P T +++ C + R+ +L L P + ++
Sbjct: 357 LGLKVWDVMKARNVSPNIYTYSVIINALCKDNRIHEARDLLRQLKCSDVFPKPFIYNPVI 416
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G C G +EA +M +R + + ++ +L
Sbjct: 417 DGFCKAGNVDEANVIVTEMEEKRCRPDKVTFTIL 450
>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g11690-like [Glycine max]
Length = 556
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 101/429 (23%), Positives = 172/429 (40%), Gaps = 24/429 (5%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ 121
TPL T+V + +HS +AL F + H P + F + +L R YFD+
Sbjct: 89 TPLYDTIVNAYV----HSHSTD-QALTFLHHMIHEGH-VPLSNTFNNLMCLLIRSNYFDK 142
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE- 180
AW + + ++ +L S IM+ + + + +E +FG
Sbjct: 143 AWWIFNELKS--KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLE--------EFGLSPN 192
Query: 181 ---FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFY 235
+ L+ C + A+++F K+ R PN T ++L+ GF + G Y
Sbjct: 193 VVIYTTLIDGCCKYGNVMLAKNLFCKM-DRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M G P+ YN I YC G A ++F EM + T LI G
Sbjct: 252 ENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A +L ++ K L P+I YN +I+ ++ A+ L ++++ + VTY
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G K L G L M E P T +L+ F + + +
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEK 431
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE 474
G P + +L+ GLC G +EA + K + Q + Y M+ Y + ++
Sbjct: 432 SGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491
Query: 475 KLEDLDRMI 483
L L+ M+
Sbjct: 492 ALRLLNEMV 500
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 5/326 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S++++ K E + ++ M+R V + +N L+ +C + +A V
Sbjct: 230 TYSVLMNGFFKQGLQREGFQMYENMKRSGIVP----NAYAYNCLISEYCNGGMVDKAFKV 285
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F ++ + A T NIL+ G H++ G P++VTYNI I+G+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A+RLF +++ P+L T TLI G V N+ A L EM +R + P
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVT 405
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + R A E+ ME+ + D TY + GL ++ KL+ +
Sbjct: 406 YTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLG 465
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P + ++ +C L L ++ G P+ + + LC +W+
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTIGLLCRDEKWK 525
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQR 465
EA QM+ + S + Y+M+ +
Sbjct: 526 EAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/310 (24%), Positives = 135/310 (43%), Gaps = 6/310 (1%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
S FN L+ +A +F +L S+ + + I++ G E+G
Sbjct: 124 SNTFNNLMCLLIRSNYFDKAWWIFNELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAM 183
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGL 294
+ G P+VV Y IDG CK G A LF +M+R+ +P+ T + L++G GL
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGL 243
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
R + Q+++ M + + P+ AYN +IS ++ A ++ EM EK I +T
Sbjct: 244 QR---EGFQMYENMKRSGIVPNAYAYNCLISEYCNGGMVDKAFKVFAEMREKGIACGVMT 300
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + GL + KL ++ + P T +L+ FC ++D + L+ L
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
G P + L+ G A + K+M R S+ +Y +L + N E
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNYTE 420
Query: 475 KLEDLDRMIK 484
K ++ +++
Sbjct: 421 KACEMHSLME 430
>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
Length = 795
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 1/275 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHE 237
E FNVL+ +C E+ A + + + AP+ T N L+ GF + GD+ + E
Sbjct: 18 EHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGE 77
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+ L P+V+TY ID YCK C DA+ +++EM + +P + T T +++G
Sbjct: 78 ISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGK 137
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A+ +F EM + + P+ +Y +I SL + ++ A L M + IG D V Y
Sbjct: 138 VEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTA 197
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K+ ++ ++E VP T L+ C V+ G L + ++
Sbjct: 198 LMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
P+ +V G +G EA + ++M+ R
Sbjct: 258 IFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRN 292
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/309 (24%), Positives = 133/309 (43%), Gaps = 41/309 (13%)
Query: 164 RMEREIF-VGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ E E F G+R+ G S FN ++ A+C + + A + ++ S PN+ T NI
Sbjct: 417 KYESESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNI 476
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPS------------------------------- 246
L+ +G++ ++M++ GF P+
Sbjct: 477 LVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMG 536
Query: 247 ----VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+ TYN I +C+ G A +F++M L + T LIHG + ++ +A
Sbjct: 537 VKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAF 596
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+ +M + P++ YN ++ L R + A L+++M+E+ + + TY + G
Sbjct: 597 AVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGH 656
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
K ++ KLY MI FVPKTRT +L+ F ++ L + RG P+
Sbjct: 657 GKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNS 716
Query: 423 HALDLLVTG 431
D+L+ G
Sbjct: 717 STYDILICG 725
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 125/282 (44%), Gaps = 26/282 (9%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
HP+ T K++ L SK + + L D++ + +G+ K +N L+ FC
Sbjct: 503 HPTPTTHKAV---LDASSKSRRADVILHMHDQL---VGMGV-KLDLSTYNTLISTFCRLG 555
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
++ A VF ++ + + T N L+ G+ S + + +M+ G P+V TYN
Sbjct: 556 MIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYN 615
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + G +A L +M+ +P+ T L+ G G + N+ + +L+ EM +
Sbjct: 616 ILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITK 675
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P YN +IS + + ++ A ELM EM+ + I ++ TY + G K S +
Sbjct: 676 GFVPKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPEL 735
Query: 372 CK------------LYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
K L++ M E F+P T+ C++F
Sbjct: 736 NKSLKRSYQAEAKRLFEEMNEKGFIPCENTLA------CISF 771
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 90/199 (45%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
R SV +N+ IDGYC+ G A+ L E M+ P + T TL++G + ++ A+
Sbjct: 13 IRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAK 72
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L E+ NL+P++ Y +I + + + L A+ + DEM K + D VTY + GL
Sbjct: 73 KLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGL 132
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
KS +E ++ M E VP + L+ V L G ++ RG
Sbjct: 133 CKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDV 192
Query: 423 HALDLLVTGLCSRGRWEEA 441
L+ GL G A
Sbjct: 193 VVYTALMDGLFKAGMANNA 211
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/287 (20%), Positives = 119/287 (41%), Gaps = 3/287 (1%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
AP++ T N ++ + + G++ +EM G +P+ +T NI + C G M
Sbjct: 432 LAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTM 491
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L +M + P+ T ++ + R + D++ +K D+ YN +IS+
Sbjct: 492 DLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTF 551
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + A + +M K I D +TY+ + G SS L+ ++ +M+ P
Sbjct: 552 CRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNV 611
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +L+ + L + +RG P+ D+LV+G G +E + +
Sbjct: 612 ETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCE 671
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
M+ + +Y +L + +K+ +++ +Q PP
Sbjct: 672 MITKGFVPKTRTYNVLISCFAKG---KKMSQAKELMQEMQVRGIPPN 715
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/423 (19%), Positives = 166/423 (39%), Gaps = 49/423 (11%)
Query: 101 PTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
P PD + ++ ++ A +LM + + P+++T + ++ K Q E
Sbjct: 48 PAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLVNLEPNVITY---TTLIDAYCKSQCLE 104
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
+ L +D M + V + ++ C +++EA+SVF ++ PN +
Sbjct: 105 DALYMYDEMTVKSLVP----DVVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSY 160
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFR------------------------------- 244
L+ + G+V + MV+RG
Sbjct: 161 ATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLE 220
Query: 245 ----PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
P+ VTY+ IDG+CK G L +EME P++ ++++ G +++
Sbjct: 221 ESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNE 280
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + +M +RN+ P++ Y +I + A++L EM+ + + +N +
Sbjct: 281 AMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVN 340
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L +S +E +L+ M+ +P +M F + N+ + ++
Sbjct: 341 NLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGF 400
Query: 421 HGHALDLLVTGLCSRGRWE-EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
A ++L+ GL G++E E+F + L S M+ Y + N L+ L
Sbjct: 401 DVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPD-SATFNTMINAYCKEGNLGNALKLL 459
Query: 480 DRM 482
+ M
Sbjct: 460 NEM 462
>gi|255660918|gb|ACU25628.1| pentatricopeptide repeat-containing protein [Xeroaloysia
ovatifolia]
Length = 484
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 114/465 (24%), Positives = 196/465 (42%), Gaps = 58/465 (12%)
Query: 68 LVENVL-GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
LV NVL G + H AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVLHGSKTSEH-----ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCIL 68
Query: 127 SHVQRTHPSLLTLKSMSI-MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
+ + L + M + M+ K +E+++ F +ME +G+ + ++ ++ L
Sbjct: 69 LDMPKK--GLEWDEDMWVLMIDSYGKAGIVQESVKLFQKMEE---LGVER-TTKSYDTLF 122
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+ + A+ F K+LS P T N+++ GF SG V F+ +M R
Sbjct: 123 KVILRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFDDMKSREIS 182
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P V+TYN I+GY + +A + F EM+ P++ T TTLI G V + A +L
Sbjct: 183 PDVITYNTMINGYYRVKKMDEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRL 242
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLM 363
+EM +KP+ Y+ ++ L ++ A ++ EM +K I DN + + G
Sbjct: 243 VEEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSVLKEMVDKYIAPTDNSIFMRLISGQC 302
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG------ 417
K+ L+ + MI + +L++ FC + D + L LI++
Sbjct: 303 KTGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKADQHDKAVKLLDKLIEKDIILRPQ 362
Query: 418 ----------------FCPHGH--------------------ALDLLVTGLCSRGRWEEA 441
C +G AL+ LV G G + A
Sbjct: 363 STLHMEPSAYNPMIEYLCNNGQTAKAEALVRQLLKLGVQDPTALNTLVRGHSQEGSPDSA 422
Query: 442 FECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
FE K ML R+ +++Y ++Q YL + + LD MI+N
Sbjct: 423 FELLKIMLRRKVDSEKSAYDSLVQSYLKKNEPADAKXALDSMIEN 467
>gi|242088695|ref|XP_002440180.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
gi|241945465|gb|EES18610.1| hypothetical protein SORBIDRAFT_09g027340 [Sorghum bicolor]
Length = 437
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/362 (24%), Positives = 167/362 (46%), Gaps = 13/362 (3%)
Query: 134 PSLLT-LKSMSIMLSRISKFQSYEETLEAFDRMEREIFV--GIRKFGSEE---FNVLLQA 187
P LLT L+++ + L + + F + + L AF R + + V + F S F+ LL +
Sbjct: 77 PPLLTALRTLRVPL-QPTAFAALIDHLGAFSRPDAALLVFRAVPAFCSHSNATFHALLHS 135
Query: 188 FCTQKEMKEARSVFV---KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+ AR + KL R N + NI+L G + + EM+ RG R
Sbjct: 136 LVCNGRVDAARDMLPEAPKLGVRT--NAVSYNIILKGVCHRDGFSGARVVLDEMLARGLR 193
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+VVT+N + C++G A +L +EM R + P+ T L+ G A++L
Sbjct: 194 PTVVTFNTLVGSACREGELAAAEQLMDEMARRSVPPNAVTYALLMQGLCDAGRYDDAKKL 253
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+M R+ +PD+ Y ++S+ C D L+ +M ++++ D+ +Y+ + L
Sbjct: 254 LFDMEYRDCQPDVTNYGVLMSACAACGDAGGIRGLISDMRKRKLTPDDASYNVLIKCLCD 313
Query: 365 SSGLEGVCK-LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ ++ + L + ++ VP T +L+ C DLGL ++ ++ G CP
Sbjct: 314 AGKVDEAHRALVEMQLKDGTVPSAATYRVLLDGCCEARDFDLGLRVFNAMLASGHCPLAL 373
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
LV GL G+ EEA +QM R ++ ++ + + +++ ++ ++ ++
Sbjct: 374 TFRRLVRGLGEDGKAEEACFVLEQMGQRGMRLDAQGWQSVAACVCSSSSATEMNLINHLV 433
Query: 484 KN 485
+
Sbjct: 434 SS 435
>gi|255660780|gb|ACU25559.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 418
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/249 (24%), Positives = 110/249 (44%), Gaps = 14/249 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + GD+ + EM ++G +P +TY IDG CK+G A + M +
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
T LI G A ++ EM LKP+IG Y +I+ + D+
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 336 AMELMDEME 344
+L+ EM+
Sbjct: 400 GSKLLKEMQ 408
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R C+PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGCMPSVVT 418
>gi|242054767|ref|XP_002456529.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
gi|241928504|gb|EES01649.1| hypothetical protein SORBIDRAFT_03g037920 [Sorghum bicolor]
Length = 517
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 161/373 (43%), Gaps = 10/373 (2%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
P + P A L ILA+ R FD A L+ ++R S+ + ++ +++ R +
Sbjct: 130 QPGYAPGRRACHSMLAILAKHRRFDAARALLDEMRRA--SMASPAAVLLLVRRHCAARDV 187
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM 215
+ AF + F G EF+ LL A C K +++A + + F K+
Sbjct: 188 AAAVAAFRALPSFGF----DTGVAEFHGLLSALCRYKNVQDAEHLLISCEKEFPFETKSF 243
Query: 216 NILLLGFKE-SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NI+L G+ + + F+ M +G VV+Y I + K G M+LF M
Sbjct: 244 NIVLNGWCNIVCSLREAKRFWSSMERKGIDRDVVSYGSMISCFSKAGSLHSVMKLFNHMN 303
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
P + ++ R + A+ L M ++ + PD +N++I L + R +
Sbjct: 304 EAGVAPDRKVYNAIVFALAKGRCVKAAKMLVRTMEEKQVAPDTATFNSLIGPLCKARQVQ 363
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
AME+ D M E+ + T+H + S+ V L D+M + + P+ T +ML+
Sbjct: 364 EAMEMFDAMLERGLSPSVRTFHALLNVARNST---EVFDLLDKMKQLQCEPEMDTYIMLI 420
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+ FC + + LW + G P A +L+ GL GR EEA + +M +
Sbjct: 421 RKFCRWRQHESVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEEAAKYYGEMKSKGFS 480
Query: 455 VSEASYRMLQRYL 467
+ + M+ +L
Sbjct: 481 PEKKTEEMITAWL 493
>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g55840-like [Brachypodium distachyon]
Length = 968
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/370 (22%), Positives = 168/370 (45%), Gaps = 21/370 (5%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDR--MEREIFVGIRKFGSEEFNVLLQAFCTQ 191
P+++T ++ + +F++ LE ++ +E +++ +N+++ C
Sbjct: 257 PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYT---------YNIMIDKLCKM 307
Query: 192 KEMKEARSVFVKLLS-RFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVT 249
K A + ++ AP+ T N L+ GF ES + A+ +F +EM+ +G +PS+ T
Sbjct: 308 KRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIF-NEMLRQGLKPSLAT 366
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y IDGYC+ G +A+R+ EM+ PS T + +++G+ +H+A ++D M
Sbjct: 367 YTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGS-----VHEAFSVYDNME 421
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
K PD+ Y ++ L + L A E M + D T + + G+ L+
Sbjct: 422 KYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLD 481
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
L ++M+ F+P T +L+ FC ++ + L ++++G P L+
Sbjct: 482 EALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLEKGLVPDIVTYTCLL 541
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEA-SYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
GL G+ + A ++++ + ++ +Y + ++A K+E + N
Sbjct: 542 KGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLHKVE-MTIYDMNQNK 600
Query: 489 VLPPPTRQQV 498
V P P +
Sbjct: 601 VYPNPASYNI 610
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/320 (23%), Positives = 145/320 (45%), Gaps = 6/320 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L+ + + + ++ ++ + P N T +L+LG + G + F +M
Sbjct: 607 SYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLILGLSKHGMIEIAVKFLDKM 666
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
VL G P +++++ I+ + +K DA++LF M+ + PS +T + +I+G L+R
Sbjct: 667 VLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMING--LIRKN 724
Query: 298 -IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ + + +M + L+P Y A+I++ R D+N A L +EM I V
Sbjct: 725 WLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADS 784
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
++ GL K +E ++ +I VP T LM C ++ L+L +
Sbjct: 785 SIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESC 844
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G ++L+TGLC +A E ++M + + + +Y L + +
Sbjct: 845 GLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEG 904
Query: 477 EDLDRMIKNLQAVLPPPTRQ 496
E L I++ + ++P T Q
Sbjct: 905 EKLLNDIED-RGLVPSYTDQ 923
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 111/265 (41%), Gaps = 9/265 (3%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ N LL C + EA + K+++ F P+ T ILL GF G + +
Sbjct: 465 KTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQM 524
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT----ITTLIHGAG 293
M+ +G P +VTY + G K+G A LF+E + C + ++++G
Sbjct: 525 MLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQE---IICKEGMYADCIAYNSMMNGYL 581
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+H+ +M + + P+ +YN ++ I+ L+ ++ L +M K I NV
Sbjct: 582 KAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNV 641
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + GL K +E K D+M+ P + +L+ F R+ L L+ +
Sbjct: 642 TYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCM 701
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRW 438
P ++ GL R W
Sbjct: 702 KWLYMSPSSKTYSAMINGLI-RKNW 725
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/405 (21%), Positives = 162/405 (40%), Gaps = 45/405 (11%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAF--EKTLHILARMRYFDQAWELMSHVQRTHP 134
++A NG E F + +PD + L L + + QA E MS + P
Sbjct: 402 YSAMLNG-SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHI-P 459
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM 194
S + K+++ +L I S +E L+ ++M F+ + +LL FC + ++
Sbjct: 460 SAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIP----DIHTYTILLSGFCRKGKI 515
Query: 195 KEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR------------ 241
A + +L + P+ T LL G + G V A + E++ +
Sbjct: 516 VPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNS 575
Query: 242 ---GF---------------------RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
G+ P+ +YNI + G+ KKG ++ L+++M R
Sbjct: 576 MMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKG 635
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P+ T LI G I A + D+M + PD +++ +I++ ++ A+
Sbjct: 636 IKPTNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDAL 695
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L + M+ + + TY M GL++ + L+ C + M+E PK + L+
Sbjct: 696 QLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAK 755
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
C ++ L + G P A +V GL G+ EE
Sbjct: 756 CRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGI 800
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 97/423 (22%), Positives = 166/423 (39%), Gaps = 55/423 (13%)
Query: 74 GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH 133
G+L H G AL+ +Q + IL + + QA L+ H+ T
Sbjct: 77 GKLDKGH--GKLALKILSSIVQRSGLERITHIYCMAAQILTQAKMHSQAMSLLKHLAMTG 134
Query: 134 PSLLTLKSMSIMLSRISKFQS----YEETLEAFDRMEREIFVGIR---------KFGSEE 180
S + S +L IS+ S ++ + A+ + +R + + K +
Sbjct: 135 FSCSAV--FSSLLCTISRCDSNPLVFDLLVNAYVKEKRVVDASMAILFMDNCGFKASAHA 192
Query: 181 FNVLLQAFCTQKEMKEARSV--FVK--LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
N +L A E+ E++ V F+K L+ +F + T NI+L G++ + H
Sbjct: 193 CNAVLNALV---EIGESKHVWFFLKEGLVRKFPLDVTTCNIVLNSMCIEGNLKGAKHMIH 249
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M P+V+TYN + Y KKG F AM + E+ME+ + T +I ++
Sbjct: 250 KMKSCSL-PNVITYNTILHWYVKKGRFKAAMCVLEDMEKNGVEADVYTYNIMIDKLCKMK 308
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
A L M NL PD YN +I + A+ + +EM + + TY
Sbjct: 309 RSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDESKMMLAIHIFNEMLRQGLKPSLATYT 368
Query: 357 TMFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ G ++ + E + LY+ + G + ML F V + +G D
Sbjct: 369 TLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYSAMLNGSVHEAFSVYDNMEKYGCSPD 428
Query: 416 --------RGFCPHGH---------------------ALDLLVTGLCSRGRWEEAFECSK 446
RG C GH L+ L+ G+C+ G +EA + +
Sbjct: 429 VYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTLNALLLGICNHGSLDEALDLCE 488
Query: 447 QML 449
+M+
Sbjct: 489 KMV 491
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 145/364 (39%), Gaps = 19/364 (5%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKS 141
L +E + + P P ++ +H + + ++ L + R P+ +T +
Sbjct: 586 LHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYR- 644
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+++ +SK E ++ D+M E R F+VL+ AF + M +A +F
Sbjct: 645 --LLILGLSKHGMIEIAVKFLDKMVLEGIYPDRL----SFDVLINAFSEKSRMSDALQLF 698
Query: 202 --VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+K L +P++KT + ++ G + +MV G P Y I+ C+
Sbjct: 699 NCMKWL-YMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCR 757
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A RL EEM + +P+ ++++ G + + +F + + + P I
Sbjct: 758 FGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIAT 817
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ ++ L + ++ A+ L ME + D VTY+ + GL K + +LY+ M
Sbjct: 818 FTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMK 877
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P T L + R G L + DRG P T C R E
Sbjct: 878 SKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIEDRGLVPS-------YTDQCPEWRME 930
Query: 440 EAFE 443
A +
Sbjct: 931 NAMD 934
>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
Length = 570
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/357 (24%), Positives = 148/357 (41%), Gaps = 7/357 (1%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L A++ F+ T + T + + LA+ + A LM + + T+ + +
Sbjct: 147 LAAMDHFETTTTN-GCTIDIHTYTAIVDWLAKNKKIQDAVALMEKIT-ANGCTPTIATYN 204
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L+ + K EE ++ + R+I + L+ +K EA +F +
Sbjct: 205 ALLNGLCKMGRLEEAID----LLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKE 260
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ R + L+ G ++G + Y M +G P VVT + IDG CK G
Sbjct: 261 MALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGR 320
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
G A+R+F+ ME P+ + LIHG R + A ++ +M K PD YN
Sbjct: 321 IGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNI 380
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L + D+ AA DEM E D TY+ + G K+ + C ++D M
Sbjct: 381 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSH 440
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P T L+ C ++ + ++ +RG P LV GLC G+ E
Sbjct: 441 CSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLE 497
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/371 (24%), Positives = 158/371 (42%), Gaps = 47/371 (12%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPT + L+ L +M ++A +L+ + P ++T S+ I +
Sbjct: 197 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL------IDGLGKEKR 250
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ EA+ ++ +E+ + + + L++ ++ +A SV+ + S+ P+ T++
Sbjct: 251 SFEAY-KLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLS 309
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPS------------------------------ 246
++ G ++G + A + M RG P+
Sbjct: 310 TMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 369
Query: 247 -----VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
+TYNI IDG CK G A F+EM C P + T L+ G N A
Sbjct: 370 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAA 429
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+FD+M + P++ Y +IS L + R L A M+E+ D+ Y ++ G
Sbjct: 430 CGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDG 489
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L KS LEG C L+D M E V ++T L+ C RVD ++L+ + G PH
Sbjct: 490 LCKSGKLEGGCMLFDEM-ERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PH 547
Query: 422 GHALDLLVTGL 432
+A + +++ L
Sbjct: 548 PYAYNSIISTL 558
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 3/263 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+N LL C ++EA + K++ P+ T L+ G KE A ++F EM
Sbjct: 203 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-KEM 261
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
LRG V Y I G + G A +++ M C+P + T++T+I G I
Sbjct: 262 ALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRI 321
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A ++F M R L P+ Y+A+I L + R ++ A+E++ +M++ D +TY+ +
Sbjct: 322 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 381
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL KS +E +D M+E P T +L+ FC D ++ +
Sbjct: 382 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHC 441
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P+ L++GLC R + +A
Sbjct: 442 SPNVVTYGTLISGLCKRRQLTKA 464
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 128/301 (42%), Gaps = 39/301 (12%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDV-TAMEMF- 234
E +NVL+ +C +E +EA +V ++ + AP+ KT N++L G +SG V AM+ F
Sbjct: 95 ETWNVLITGYCLAREPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFE 154
Query: 235 ---------------------------------YHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ G P++ TYN ++G CK G
Sbjct: 155 TTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMG 214
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ L ++ C P + T T+LI G G + +A +LF EM R L D Y
Sbjct: 215 RLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYT 274
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
A+I L++ + A + M + D VT TM GL K+ + +++ M
Sbjct: 275 ALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEAR 334
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEE 440
P L+ C ++D L + + + FC P ++L+ GLC G E
Sbjct: 335 GLAPNEVVYSALIHGLCKARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEA 393
Query: 441 A 441
A
Sbjct: 394 A 394
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 126/297 (42%), Gaps = 14/297 (4%)
Query: 182 NVLLQAFCTQKEMKEARSVFV-KLLSRFAPNNKTMNILLLGF---KESGDVTA----MEM 233
N LL F K +EA ++ +L + F P+ +T N+L+ G+ +E + A ME
Sbjct: 63 NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
Y G PS+ T+N+ + G CK G AM FE C + T T ++
Sbjct: 123 DY------GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLA 176
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ I A L +++ P I YNA+++ L + L A++L+ ++ + D V
Sbjct: 177 KNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVV 236
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY ++ GL K KL+ M V T L++ ++ +++ +
Sbjct: 237 TYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTM 296
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+G P L ++ GLC GR A K M R +E Y L L +A
Sbjct: 297 TSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 353
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/231 (24%), Positives = 97/231 (41%), Gaps = 1/231 (0%)
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
GF+ SV T N +D + + +A L + LP ++T LI G L R +A
Sbjct: 54 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113
Query: 302 RQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
+ EM + + P + +N ++ L + + AAM+ + D TY +
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K+ ++ L +++ P T L+ C R++ ++L ++D G P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
L+ GL R EA++ K+M +R + Y L R L+QA
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAG 284
>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
lyrata]
Length = 1114
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 175/402 (43%), Gaps = 18/402 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYE 156
F P+ + + L + R + L+ ++ P++ T +L R K
Sbjct: 221 FRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKIN--- 277
Query: 157 ETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNK 213
E E RM+ E G + + VL+ A CT +++ A+ VF K+ R P+
Sbjct: 278 EAYEILKRMDDE------GCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRV 331
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T LL F ++ D+ ++ F+ EM G P VVT+ I +D CK G FG+A + M
Sbjct: 332 TYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVM 391
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
LP+L T TLI G V + A ++FD M +KP Y I + D
Sbjct: 392 RDQGILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDS 451
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+A+E ++M+ K I + V + + L K+ +++ + + VP + T M+
Sbjct: 452 VSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMM 511
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
MK + +D + L +++ P ++ L+ L R +EA++ +M +
Sbjct: 512 MKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 571
Query: 454 QVSEASYRMLQRYLVQANANEKLEDLDRMIKNL-QAVLPPPT 494
+ + +Y L L N K+++ + + + Q PP T
Sbjct: 572 KPTVVTYNTL---LAGLGKNGKIQEAIELFEGMVQKGCPPNT 610
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/306 (24%), Positives = 138/306 (45%), Gaps = 7/306 (2%)
Query: 165 MEREIFVGIRKFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILL 219
+ +++F+ ++ G +N LL A+ ++ E ++ ++ + PN T NI++
Sbjct: 805 IAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVI 864
Query: 220 LGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
G ++G+V A++++Y M R F P+ TY IDG K G +A +LFE M C
Sbjct: 865 SGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGC 924
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P+ LI+G G A LF M K ++PD+ Y+ ++ L ++ +
Sbjct: 925 RPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLH 984
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFF 397
E++E + D V Y+ + GL K LE L++ M + + + P T L+
Sbjct: 985 YFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNL 1044
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
+ V+ ++ + G P+ + L+ G G+ E A+ + M+ +
Sbjct: 1045 GIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNT 1104
Query: 458 ASYRML 463
+Y L
Sbjct: 1105 GTYEQL 1110
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 119/280 (42%), Gaps = 3/280 (1%)
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFK 223
ER + GI + G +++ AR +F K P T N+L+ G
Sbjct: 739 ERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLL 798
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
E+ + + + ++ G P V TYN +D Y K G + +++EM C P+
Sbjct: 799 EADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTI 858
Query: 284 TITTLIHGAGLVRNIHQARQL-FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +I G N+ A L +D M R+ P Y +I L + L A +L +
Sbjct: 859 THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 918
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
M + + Y+ + G K+ + C L+ RM++ P +T +L+ C+ R
Sbjct: 919 MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
VD GL+ + L + G P +L++ GL R EEA
Sbjct: 979 VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEAL 1018
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 150/327 (45%), Gaps = 17/327 (5%)
Query: 120 DQAWELM---SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKF 176
+Q W M HV P ++T +I++ + K ++ E D M + GI
Sbjct: 350 NQFWSEMEKDGHV----PDVVTF---TILVDALCKAGNFGEAFAKLDVMRDQ---GILP- 398
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGD-VTAMEMF 234
+N L+ + +A +F + S P T + + + +SGD V+A+E F
Sbjct: 399 NLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 458
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+M +G P++V N + K G +A ++F ++ + +P T ++
Sbjct: 459 -EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSK 517
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
V I +A +L EM + +PD+ N++I++L + ++ A ++ M+E ++ VT
Sbjct: 518 VGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVT 577
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ GL K+ ++ +L++ M++ P T T L C N V L L + ++
Sbjct: 578 YNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMM 637
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEA 441
D G P + ++ GL G+ +EA
Sbjct: 638 DMGCVPDVFTYNTIIFGLVKNGQVKEA 664
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 141/322 (43%), Gaps = 12/322 (3%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFK---ESGDVTAMEMF 234
+E N +L+A +++E VF + R + N L FK G +
Sbjct: 120 TETCNYMLEALRVDGKIEEMAYVFDLMQKRII--KRDTNTYLTIFKCLSVKGGLRQAPFA 177
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+M GF + +YN I K +AM ++ M PSLQT ++L+ G G
Sbjct: 178 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGK 237
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
R+I L EM LKP++ + I L R +N A E++ M+++ G D VT
Sbjct: 238 RRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVT 297
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y + L + L+ +++ +M G+ P T + L+ F N +D W +
Sbjct: 298 YTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEME 357
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV--SEASYRMLQRYLVQANA 472
G P +LV LC G + EAF +K ++R + + + +Y L L++ +
Sbjct: 358 KDGHVPDVVTFTILVDALCKAGNFGEAF--AKLDVMRDQGILPNLHTYNTLICGLLRVH- 414
Query: 473 NEKLEDLDRMIKNLQAVLPPPT 494
+L+D + N++++ PT
Sbjct: 415 --RLDDALEIFDNMESLGVKPT 434
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/358 (21%), Positives = 145/358 (40%), Gaps = 49/358 (13%)
Query: 173 IRKFG----SEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGD 227
+R+FG + +N L+ + EA V+ + +L F P+ +T + L++G + D
Sbjct: 181 MREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRD 240
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ ++ EM G +P+V T+ I I + G +A + + M+ C P + T T
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI R + A+++F +M KPD Y ++ RDL++ + EME+
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360
Query: 348 IGHDNV-----------------------------------TYHTMFFGLMKSSGLEGVC 372
D V TY+T+ GL++ L+
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
+++D M P T ++ + ++ + L + + +G P+ A + + L
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 480
Query: 433 CSRGRWEEAFECSKQMLVRRRQVS----EASYRMLQR-YLVQANANEKLEDLDRMIKN 485
GR EA KQ+ + + +Y M+ + Y +E ++ L M++N
Sbjct: 481 AKAGRDREA----KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVEN 534
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 85/450 (18%), Positives = 182/450 (40%), Gaps = 65/450 (14%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--P 134
+ + + ALE F+ ++ P A +L+ LA+ +A ++ ++ P
Sbjct: 445 YGKSGDSVSALETFE-KMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP 503
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFC 189
+T ++M+ SK +E ++ M E ++ V N L+
Sbjct: 504 DSVTY---NMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIV---------VNSLINTLY 551
Query: 190 TQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ EA +F+++ + P T N LL G ++G + + MV +G P+ +
Sbjct: 552 KADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTI 611
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFD 306
T+N D CK A+++ +M + C+P + T T+I GLV+N + +A F
Sbjct: 612 TFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF--GLVKNGQVKEAMCFFH 669
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH-DNVTYHTMFFGLMKS 365
+M K+ + PD ++ +++ + A +++ N+ + + ++
Sbjct: 670 QM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAE 728
Query: 366 SGLE------------GVCKLYD-------------------RMIEGKFV------PKTR 388
+G++ G+C+ D RM+ KF PK
Sbjct: 729 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLP 788
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +L+ +++ +++ + + G P + L+ G+ +E FE K+M
Sbjct: 789 TYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEM 848
Query: 449 LVRRRQVSEASYRMLQRYLVQA-NANEKLE 477
+ + ++ ++ LV+A N ++ L+
Sbjct: 849 SAHECEPNTITHNIVISGLVKAGNVDDALD 878
>gi|222423065|dbj|BAH19514.1| AT3G04130 [Arabidopsis thaliana]
Length = 508
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/339 (26%), Positives = 153/339 (45%), Gaps = 14/339 (4%)
Query: 26 TTTQSSEIERITRII----NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHS 81
T + S+ E I +I D D + + LS LV +L R
Sbjct: 43 TLDKYSQSEEIWNVIVGRDGDRDSEDDVFKRLSSDEICKRVNLSDGLVHKLLHRFRDDWR 102
Query: 82 NGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKS 141
+ L L++ + H H + DA++ + IL + + +D+ E + ++ L+TL +
Sbjct: 103 SALGILKWAESCKGHKH---SSDAYDMAVDILGKAKKWDRMKEFVERMR--GDKLVTLNT 157
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
++ ++ R + +EE + FDR+ G+ K +E N+LL C +K +++AR V
Sbjct: 158 VAKIMRRFAGAGEWEEAVGIFDRLGE---FGLEK-NTESMNLLLDTLCKEKRVEQARVVL 213
Query: 202 VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L S PN T NI + G+ ++ V EM GFRP V++Y I YC++
Sbjct: 214 LQLKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQF 273
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
F + EME P+ T TT++ + +A ++ M + KPD YN
Sbjct: 274 EFIKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCKPDSLFYN 333
Query: 322 AMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
+I +L R L A + EM E + + TY++M
Sbjct: 334 CLIHTLARAGRLEEAERVFRVEMPELGVSINTSTYNSMI 372
>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
Length = 616
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/360 (25%), Positives = 153/360 (42%), Gaps = 32/360 (8%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME---------------REIFVGIRKFG 177
+P +LT +I++S I K EE LE D M+ + V +
Sbjct: 201 NPDVLTC---NILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVE 257
Query: 178 SEE-------------FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFK 223
+ E FN LL FC + A V ++ P+ T IL+ G
Sbjct: 258 AAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLC 317
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
G V E+V +G+ P V+ Y +DG CK G +A +L +EM C +
Sbjct: 318 RVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVV 377
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
++L+ G N+H+AR++ EM N+ P + YN ++ LI+ ++ A+ L+ ++
Sbjct: 378 MYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDL 437
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+ D VTY+T+ GL K++ + C L D M P T+ ++ C RV
Sbjct: 438 VARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRV 497
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D +L + + P+ L+ GLC R ++A M + + + +YR L
Sbjct: 498 DDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKL 557
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 131/292 (44%), Gaps = 12/292 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
PD T+ + L R+ A+ L+ + R P ++ S+ L + +
Sbjct: 304 PDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGE------- 356
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+E ++ +E+ V + G ++ L+ +C + +AR + +++S P T NI
Sbjct: 357 IEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNI 416
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+L G + G ++ ++V RG+ P VVTYN IDG CK +A L +EM
Sbjct: 417 VLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRG 476
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C P+ T+ +++ G V + A L EM ++ P++ Y ++I L + ++ A
Sbjct: 477 CFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDAC 536
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
++D M + + D+ Y + + + +YD M+ F+P T
Sbjct: 537 MVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLPDGST 588
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 96/413 (23%), Positives = 174/413 (42%), Gaps = 18/413 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMS 143
A++FF + + + ++ L IL + + + ++ + + P+L+T K +
Sbjct: 10 AIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILI 69
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+ + E L A D V I FNVL+ +A +F
Sbjct: 70 RGNCKAGQAMRALEFLRALDEFSVAPDVYI-------FNVLIHGLFKDGNPDQAVKLFEN 122
Query: 204 L-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR--PSVVTYNIRIDGYCKK 260
+ SR P T N ++ G +SG++ EM+ +G + P +VTYN I+ + +
Sbjct: 123 MESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRA 182
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+A E+M+ P + T L+ G ++ +A ++ D M PD+ Y
Sbjct: 183 SRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITY 242
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N++I +L + A E++ M D VT++T+ G K+ L ++ + M
Sbjct: 243 NSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCR 299
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+P T +L+ C +V + L ++ +G+ P A LV GLC G EE
Sbjct: 300 ENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEE 359
Query: 441 AFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
A + K+M VR + Y ++ Y N ++ E L M+ ++PP
Sbjct: 360 AHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS--INMVPP 410
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/354 (22%), Positives = 145/354 (40%), Gaps = 11/354 (3%)
Query: 101 PTPDA--FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P PD + +H L +A E++ + P L+T ++ L K
Sbjct: 235 PVPDVITYNSIIHALCVAGKVVEAAEILKTMS-CSPDLVTFNTL---LDGFCKAGMLPRA 290
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
LE + M RE + + +L+ C +++ A + +++ + + P+
Sbjct: 291 LEVLEEMCRENILP----DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTS 346
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G +SG++ EM +RG R VV Y+ + GYC+ G A + EM +
Sbjct: 347 LVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSIN 406
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P L T ++ G +I +A L ++ R PD+ YN +I L + + A
Sbjct: 407 MVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREAC 466
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+L DEM + ++VT ++ FGL + ++ L M + P L+
Sbjct: 467 DLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGL 526
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
C + R+D + + +G A L+ + GR EA +M+ R
Sbjct: 527 CKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVAR 580
>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
Length = 662
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 14/317 (4%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPN 211
E L+ ++RM +E GSE +N L+ C+ +M EA SV K+ + PN
Sbjct: 331 EALDLWNRMIQE--------GSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPN 382
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T + L+ GF ++GD+ +++M+ G P+VV Y +D C+ F A+ L E
Sbjct: 383 ETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIE 442
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M C P+ T T I G A ++ ++M + P++ YN ++ L +
Sbjct: 443 NMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAK 502
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A++++ E+EE I + VTY+T+ G + +G ++ +++ G P + T
Sbjct: 503 RTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYN 562
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRG-FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
++ +C V + L L +G P L+ G+C+ +EA +M+
Sbjct: 563 TVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMIN 622
Query: 451 RRRQVSEASYRMLQRYL 467
+ A++ L R L
Sbjct: 623 EGICPNRATWNALVRGL 639
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 125/268 (46%), Gaps = 4/268 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+ ++ + C +++EAR + +++ S F P N L+ GF + + ++EM +
Sbjct: 216 YTTVVSSMCRLGKVEEARELSMRIKS-FVP---VYNALINGFCREHKMEEVFELFNEMAV 271
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P V+TY+ I+ + G A+ + +M C P++ T T+L+ G + + +
Sbjct: 272 EGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCE 331
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L++ M + +P+ AYN +I L + A+ + +ME + + TY T+
Sbjct: 332 ALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLID 391
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
G K+ L G +++++MI +P ++ C N + L+L + + P
Sbjct: 392 GFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPP 451
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ + + GLC G+ E A + QM
Sbjct: 452 NTITFNTFIKGLCCSGKTEWAMKVLNQM 479
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/386 (21%), Positives = 164/386 (42%), Gaps = 14/386 (3%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PDA T + + R+ ++A EL ++ P + +++ + EE E
Sbjct: 211 PDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVY------NALINGFCREHKMEEVFE 264
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F+ M E GI ++ ++ ++ A +V K+ R +PN T L+
Sbjct: 265 LFNEMAVE---GIDP-DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLM 320
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G+ G + ++ M+ G P+ V YN I G C G +A+ + ++MER
Sbjct: 321 KGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T +TLI G ++ A +++++M P++ Y M+ L R N A+ L
Sbjct: 381 PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHL 440
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
++ M + +T++T GL S E K+ ++M + P T ++
Sbjct: 441 IENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFN 500
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
R L + G + + + + +++G C G ++ A + + ++LV + +
Sbjct: 501 AKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSIT 560
Query: 460 YR-MLQRYLVQANANEKLEDLDRMIK 484
Y ++ Y Q ++ +DR+ K
Sbjct: 561 YNTVIYAYCKQGEVKTAIQLVDRLTK 586
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/201 (21%), Positives = 86/201 (42%), Gaps = 2/201 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN ++ C + + A V ++ APN T N +L G + E+
Sbjct: 456 FNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIE 515
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ ++VTYN + G+C G F A+++ ++ P T T+I+ +
Sbjct: 516 EMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVK 575
Query: 300 QARQLFDEMPKRNLK-PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A QL D + K+ PD+ Y +++ + ++ A+ +D+M + I + T++ +
Sbjct: 576 TAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPNRATWNAL 635
Query: 359 FFGLMKSSGLEGVCKLYDRMI 379
GL G G + D ++
Sbjct: 636 VRGLFSKLGHLGPIHIVDNIL 656
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/279 (20%), Positives = 115/279 (41%), Gaps = 8/279 (2%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+ P T I LG++ D+ ++ M L G + + I I+ Y + G A
Sbjct: 70 KHTPLTYTTMIKRLGYER--DIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQA 127
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
++ F + C PS++ ++ +++ M + ++ ++ YN ++ +
Sbjct: 128 LKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKA 187
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + ++AA +L+ EM K D V+Y T+ + + +E +L R+ FVP
Sbjct: 188 LCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI--KSFVPV 245
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
L+ FC +++ L+ + G P ++ L G E A
Sbjct: 246 YNA---LINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLA 302
Query: 447 QMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDRMIK 484
+M +R + ++ L + Y + E L+ +RMI+
Sbjct: 303 KMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQ 341
>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 598
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 129/267 (48%), Gaps = 2/267 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ F T + + +A V +++L +F P+ N L+ GF + + M +
Sbjct: 126 LIKGFFTLRNVPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 184
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VTYNI I C +G A+++ +++ C P++ T T LI L + +A
Sbjct: 185 FSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEAL 244
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L DEM R LKPD+ YN +I + + ++ A E++ +E K D ++Y+ + L
Sbjct: 245 KLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRAL 304
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ E KL +M K P T +L+ C + +++ +NL + ++G P
Sbjct: 305 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 364
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
++ D L+ C GR + A E + M+
Sbjct: 365 YSYDPLIAAFCREGRLDVAIEFLETMI 391
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 124/275 (45%), Gaps = 4/275 (1%)
Query: 173 IRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ KFG + +N L+ FC + +A V ++ S+ F+P+ T NI++ G +
Sbjct: 146 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 205
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+++ +P+V+TY I I+ +G +A++L +EM P + T T+
Sbjct: 206 DLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTI 265
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G + +A ++ + + +PD+ +YN ++ +L+ +LM +M ++
Sbjct: 266 IRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 325
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VTY + L + +E L M E P + L+ FC R+D+ +
Sbjct: 326 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 385
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+I G P + ++ LC G+ ++A E
Sbjct: 386 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 420
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G + +++ L E M R P + T LI G +RN+ +A ++ + + K +PD+
Sbjct: 96 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+I+ + ++ A ++D M K D VTY+ M L L+ K+ D+
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ P T +L++ + VD L L ++ RG P + ++ G+C G
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ AFE + + ++ + SY +L R L+ E+ E L
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 316
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + + A + L L P+ + NILL G E +M
Sbjct: 262 YNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 321
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRL------------------------------ 269
P+VVTY+I I C+ G +AM L
Sbjct: 322 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 381
Query: 270 -----FEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNA 322
E M CLP + T++ A L +N QA ++F ++ + P+ +YN
Sbjct: 382 VAIEFLETMISDGCLPDIVNYNTVL--ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 439
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M S+L D A+ ++ EM I D +TY++M L + ++ +L M +
Sbjct: 440 MFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE 499
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T +++ FC R++ +++ ++ G P+ +L+ G+ G EA
Sbjct: 500 FHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 559
Query: 443 ECSKQMLVRRRQVSEASYRMLQR 465
E + LVR +SE S++ L R
Sbjct: 560 ELAND-LVRINAISEYSFKRLHR 581
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG+ MV +G+ P V+ I G+ A+R+ E +E+ P +
Sbjct: 98 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFA 156
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI+G + I A ++ D M ++ PD YN MI SL L+ A++++D++
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+TY + M G++ KL D M+ P T +++ C VD
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ L +G P + ++L+ L ++G+WEE + +M + + +Y +L
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336
Query: 465 RYLVQANANEKLEDLDRMIK 484
L + E+ +L +++K
Sbjct: 337 TTLCRDGKIEEAMNLLKLMK 356
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 98/229 (42%), Gaps = 7/229 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A+ K ++ TP +++ + R D A E + + L + + +
Sbjct: 347 EAMNLLKL-MKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFL-ETMISDGCLPDIVNYNT 404
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+L+ + K ++ LE F ++ VG S +N + A + + A + +++
Sbjct: 405 VLATLCKNGKADQALEIFGKLGE---VGCSP-NSSSYNTMFSALWSSGDKIRALHMILEM 460
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+S P+ T N ++ G V +M F PSVVTYNI + G+CK
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRI 520
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
DA+ + + M C P+ T T LI G G +A +L +++ + N
Sbjct: 521 EDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIN 569
>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 575
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 107/475 (22%), Positives = 199/475 (41%), Gaps = 57/475 (12%)
Query: 53 TLLQHL--PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL 110
+LL +L +T+ S L E ++ + S L + ++ + F P + F L
Sbjct: 79 SLLHYLTESETSKTKSRLYEVIINAYVQSQS--LDSSIYYFNEMVDKGFVPGSNCFNNLL 136
Query: 111 HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
+ F+Q W + + +L + S I++ + E++ + +
Sbjct: 137 TFVVGSSSFNQWWCFFN--ESKIKVVLDVYSFGIVIKGCCEAGEIEKSFD--------LL 186
Query: 171 VGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLG-FK 223
V +R+FG + L+ C + E+++A+ +F ++ +F N T +L+ G FK
Sbjct: 187 VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEM-GKFGLVANEWTYTVLIHGLFK 245
Query: 224 ESGDVTAMEMF----------------------------------YHEMVLRGFRPSVVT 249
EM+ + EM RG ++VT
Sbjct: 246 NGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVT 305
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
YN I G C++ +A ++ ++M+ P+L T TLI G V + +A L ++
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLK 365
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
R L P + YN ++S R D + A +++ EMEE+ I VTY + +S +E
Sbjct: 366 SRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+L M E VP T +L+ FC+ +++ L+ ++++ P+ + ++
Sbjct: 426 TAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMI 485
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMI 483
G C G A + M + + ASY L R L + ++ EDL ++MI
Sbjct: 486 LGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAEDLVEKMI 540
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 147/344 (42%), Gaps = 13/344 (3%)
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIML 146
E KF L +T T +H L + Q +E+ +Q H L + + ++
Sbjct: 222 FEMGKFGLVANEWTYTV-----LIHGLFKNGIKKQGFEMYEKMQE-HGVFPNLYTYNCVM 275
Query: 147 SRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
+++ K ++ + FD M ER + I + N L+ C + + EA V ++
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTY-----NTLIGGLCREMKANEANKVMDQMK 330
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
S PN T N L+ GF G + ++ RG PS+VTYN+ + G+C+KG
Sbjct: 331 SYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTS 390
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A ++ +EME PS T T LI N+ A QL M + L PD+ Y+ +I
Sbjct: 391 GAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLI 450
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+N A L M EK + + V Y+TM G K +L+ M E +
Sbjct: 451 HGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELA 510
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
P + L++ C ++ +L +ID G P +L+
Sbjct: 511 PNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSDTICNLI 554
>gi|255660814|gb|ACU25576.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
Length = 418
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 98/380 (25%), Positives = 161/380 (42%), Gaps = 79/380 (20%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E + T +H P D K L L +++YF W
Sbjct: 85 AIECXRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +FC + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFCKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + MI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKE-- 340
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
N R+D A L++GLC GR +A +
Sbjct: 341 ----------------NIRLD-----------------DVAYTALISGLCQEGRSVDAEK 367
Query: 444 CSKQMLVRRRQVSEASYRML 463
++ML ++ +Y M+
Sbjct: 368 MLREMLSVGLKLEIGTYTMI 387
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 61/256 (23%), Positives = 122/256 (47%), Gaps = 3/256 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFCKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAV 489
+ D ++M++ + +V
Sbjct: 361 -RSVDAEKMLREMLSV 375
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 102/257 (39%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ ++ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKIMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKLEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLMKEMQRDGYVPSV 416
Score = 42.0 bits (97), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R + +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKIMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G + + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKLEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|56201849|dbj|BAD73299.1| fertility restorer B-like [Oryza sativa Japonica Group]
gi|56202086|dbj|BAD73615.1| fertility restorer B-like [Oryza sativa Japonica Group]
Length = 647
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 138/308 (44%), Gaps = 14/308 (4%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+ + +L A + ARS+ + + FAP T N+L+ K A+ +
Sbjct: 237 ARSYTAVLAALVAHSHLSLARSLLADMRAAGFAPTTATYNVLV---KAHCSDAAVPIDDA 293
Query: 237 EMVLRGF-RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
V R +P +YN IDG C++G +A LF EM P++ T TTLIH
Sbjct: 294 VRVFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLARE 353
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
A +LFDEM +R + P++ Y+++I L + +A+EL+D M ++R + +TY
Sbjct: 354 ACFDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITY 413
Query: 356 HTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++ GL K L ++ DRM ++G+ P L+ C R N +
Sbjct: 414 SSVIDGLCKEGCLGQAMEILDRMRLQGR-KPDAGLFGKLIVGLCDAGRALEASNYLDEMN 472
Query: 415 DRGFCP-------HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
G P HG D +VT LCS+G AF+ + M R ++ +L L
Sbjct: 473 FAGIRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECL 532
Query: 468 VQANANEK 475
+ N EK
Sbjct: 533 SKKNNLEK 540
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/272 (21%), Positives = 108/272 (39%), Gaps = 43/272 (15%)
Query: 169 IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD 227
+F I K + +N ++ C + + EAR +F ++++ AP T L+
Sbjct: 296 VFRNIPKPDACSYNTVIDGLCRRGRLPEARDLFAEMIANGTAPTVVTYTTLIHWLAREAC 355
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ EM RG P+VVTY+ IDG CK G A+ L + M + LP+ T ++
Sbjct: 356 FDDALKLFDEMARRGIMPNVVTYSSLIDGLCKGGRAASAVELLDRMVKERKLPNTITYSS 415
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY--------------------------- 320
+I G + QA ++ D M + KPD G +
Sbjct: 416 VIDGLCKEGCLGQAMEILDRMRLQGRKPDAGLFGKLIVGLCDAGRALEASNYLDEMNFAG 475
Query: 321 ---------------NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
+A++++L ++ A ++ M + I T+H + L K
Sbjct: 476 IRPNRLTWSLHGRINDAVVTALCSKGEVVRAFQVYQSMRTRGISTKPTTFHLLVECLSKK 535
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ LE + M+ + +P+ T +++ +
Sbjct: 536 NNLEKAAHVVRDMLSERCIPERETWDTIVRAY 567
>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
Length = 468
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/401 (23%), Positives = 170/401 (42%), Gaps = 54/401 (13%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
KAL+ F+ + P + + L + A +L+S ++ + + SI
Sbjct: 63 KALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSI 122
Query: 145 MLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ S + + + EE+ + + M ++F FN ++Q F M++AR
Sbjct: 123 IKSLVKEAKP-EESYKVLEEMMAAGCNPDVFA---------FNGVMQGFARSNNMEKARE 172
Query: 200 VFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR--GFRPSVVTYNIRIDG 256
V+ ++ S + P+N + +IL+ G + G + EM +R G+ P+V+T++ I G
Sbjct: 173 VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHG 232
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
C+ G A+ +F M C P+ T TTLI G + QAR+LF++M + + PD
Sbjct: 233 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPD 292
Query: 317 IGAYNAMISSLIR----------------------------------CR--DLNAAMELM 340
AYN++I+ + C+ L A EL+
Sbjct: 293 AVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELV 352
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM K + D TY + GL +++ L+ ++Y +M E KF+ + V + C
Sbjct: 353 AEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKT 412
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+D ++ G P+ +L L GR E+A
Sbjct: 413 GNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDA 453
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 128/267 (47%), Gaps = 8/267 (2%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL-PSLQTITTL 288
A+E+F M PS+VTYN+ I+ C G FG A+ LF+ M+R + P T TL
Sbjct: 29 ALEVF-ETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTL 87
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G N AR+L EM +N+ ++ Y+++I SL++ + ++++EM
Sbjct: 88 ISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGC 147
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D ++ + G +S+ +E ++Y M+E + P + +L+ ++D L
Sbjct: 148 NPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLK 207
Query: 409 LWGYLIDR--GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
+ + R G+ P+ L+ GLC G E+A E ML + ++ +Y L
Sbjct: 208 ILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAG 267
Query: 467 LVQANANEKLEDLDRMIKNL-QAVLPP 492
L +A EK+ + + + QA +PP
Sbjct: 268 LCRA---EKVIQARELFEKMTQACIPP 291
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 165/420 (39%), Gaps = 81/420 (19%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEA 161
DA++ + LA+ QA E+ ++ PSL+T +++++ + + L+
Sbjct: 11 DAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTY---NVLINSRCNAGEFGKALDL 67
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR------------------SVFVK 203
F M+RE V ++ +N L+ C+ + AR S +K
Sbjct: 68 FQSMKREKRVEPDRW---TYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIK 124
Query: 204 LLSRFA------------------PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
L + A P+ N ++ GF S ++ Y MV G++P
Sbjct: 125 SLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKP 184
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC--LPSLQTITTLIHGAGLVRNIHQARQ 303
V+Y+I I G K G +++++ EM A +P++ T +TLIHG + +A +
Sbjct: 185 DNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALE 244
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+F M + KP+ Y +I+ L R + A EL ++M + I D V Y+++ G
Sbjct: 245 VFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYC 304
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K ++ KLY M G G P
Sbjct: 305 KRGSMDEAEKLYREMSGGA----------------------------------GLQPTIV 330
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLEDLDRM 482
+ L+ G C G+ A E +M + +YR+L L +A +E LE +M
Sbjct: 331 TFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQM 390
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 128/310 (41%), Gaps = 43/310 (13%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ-RTHPS 135
FA +N KA E ++ ++ + P ++ +H LA++ D++ +++S + R
Sbjct: 161 FARSNNMEKAREVYQHMVES-GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY 219
Query: 136 LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+ + + S ++ + + E+ LE F M E K+ + L+ C +++
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSM-LEAGCKPNKY---TYTTLIAGLCRAEKVI 275
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL-RGFRPSVVTYNIR 253
+AR +F K+ P+ N L+ G+ + G + E Y EM G +P++VT+N
Sbjct: 276 QARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTL 335
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---------------------- 291
IDG+CK G G A L EM T LI G
Sbjct: 336 IDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKF 395
Query: 292 -----------AGLVR--NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
GL + NI QA +F+ K P+ + + SLI+ + A +
Sbjct: 396 LLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQK 455
Query: 339 LMDEMEEKRI 348
LM+ + + I
Sbjct: 456 LMEPAKARDI 465
>gi|115434588|ref|NP_001042052.1| Os01g0153200 [Oryza sativa Japonica Group]
gi|113531583|dbj|BAF03966.1| Os01g0153200 [Oryza sativa Japonica Group]
Length = 1139
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 191 QKEM-KEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+KE+ +EA S+ KL PN N L+ ++ + + EM RG P+ V
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I I CK+G DA+ LF++M ++ +LI+G ++ +AR L M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K L P +Y+ +I+ L R DL++ MEL EM E+ I +N T+ + G K +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ +L+D+MI+ +P T ++++ +C+ + L+ +++ G P + L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 429 VTGLC 433
++GLC
Sbjct: 555 ISGLC 559
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 168/418 (40%), Gaps = 45/418 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P A+ + L + FD A L + + P+ +T +I++ + K E+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVT---YAILIHALCKRGMIED 391
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
L FD+M + GI K +N L+ +C Q + AR + ++ P + +
Sbjct: 392 ALCLFDKMRDK---GI-KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +GD+++ + EM RG + T+ I+G+CK +A RLF++M
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P+ T +I G LV NI +A QL+D+M + LKPD Y ++IS L ++ A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 337 ME-----------------------------------LMDEMEEKRIGHDNVTYHTMFFG 361
E L DEM + + D V++ + +
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K E C L+ M E P ++ + LN W ++ G+ P+
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPN 687
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+L+ LC G A K+ML ++ +Y Y EK +DL
Sbjct: 688 TVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC K+M EA +F K++ S PN T N+++ G+ G++ Y +MV
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P TY I G C A ++E + + ++T L++G
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L+DEM R +K D+ ++ ++ + ++ D + L EM+E+ + D++ Y M
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +D+M+ + P T T +L+ C + + L ++
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + + + G E+A + ML + S S+ +L + L +A + E +
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ--EAI 777
Query: 480 DRMIKNLQAVLPP 492
D M K ++ P
Sbjct: 778 DLMSKITESGFSP 790
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 103/221 (46%), Gaps = 6/221 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ M+ +SK ++ + L +D+M + + + VL+ C + A +
Sbjct: 657 TCMIDALSKEENMIQALNCWDQMVVDGY----SPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L+ PN T N L F GD+ + H +L+G S+V++NI I G CK G
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HSAMLQGHLASIVSFNILIKGLCKAG 771
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ L ++ P + +T+IH + +I++A +L++EM + LKPD+ AYN
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
I + + A+ + M + + TY + G+
Sbjct: 832 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 142/313 (45%), Gaps = 7/313 (2%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+A E ++ ++ ++ ++L S++ +L + + ET +D M G+ K
Sbjct: 566 KANEFVADLENSY-AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR---GV-KLDLVS 620
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +++ A Q + +++ +F ++ + P++ ++ + ++ + +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G+ P+ VT+ + I+ CK G G A L +EM LP+ T + ++
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L M + +L I ++N +I L + + A++LM ++ E D ++Y T+
Sbjct: 741 KAKDLHSAMLQGHLA-SIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +L++ M+ P + +++ V+ D L ++ +I G
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 420 PHGHALDLLVTGL 432
P+ L++G+
Sbjct: 860 PNWDTYRALLSGI 872
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 129/339 (38%), Gaps = 36/339 (10%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNIL 218
+AF ++ + +G++ + + L+ C + +A L + +A NN ++ L
Sbjct: 531 KAFQLYDQMVEMGLKP-DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L GF G T + EM +RG + +V++ I + K+ + LF EM+
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T +I N+ QA +D+M P+ + +I++L + L +A
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 709
Query: 339 LMDEMEEKRI--------------------------------GH--DNVTYHTMFFGLMK 364
L EM + GH V+++ + GL K
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCK 769
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L ++ E F P + ++ C ++ LW ++ +G P A
Sbjct: 770 AGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 829
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ + G ++A M+ Q + +YR L
Sbjct: 830 YNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 118/326 (36%), Gaps = 37/326 (11%)
Query: 197 ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR +F K+L S + + + ES ++ M G + S V YN+ +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------AGLVR 296
G CK +A+ + M + T TL++G G V
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301
Query: 297 NIHQARQLFDEMPKRNL----------------KPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + DE+ K+ L P++ AYNA+I L + + A L
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + + + VTY + L K +E L+D+M + L+ +C
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+D L ++ G P + L+ GLC G E ++M R + ++
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++ + +E D+MI +
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDS 507
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+R AR LFD+M + + D Y A I + R+L+ A L+ ME + + V
Sbjct: 176 IRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVP 235
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + +GL K+ ++ ++ + M+ T L+ FC +++ L + +I
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P ++ L + EEAF + ++ + +Y L L + NE
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK---NE 352
Query: 475 KLEDLDRMIKNLQA 488
+ +D DR+ K +
Sbjct: 353 RFDDADRLFKEMAG 366
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/117 (26%), Positives = 58/117 (49%), Gaps = 1/117 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L++ C +++EA + K+ S F+P+ + + ++ + GD+ ++EM
Sbjct: 759 SFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEM 818
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+ +G +P VV YNI I G A+ ++ M R P+ T L+ G L+
Sbjct: 819 LYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875
>gi|255660794|gb|ACU25566.1| pentatricopeptide repeat-containing protein [Verbena montevidensis]
Length = 418
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 150/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M + G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + +++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKG 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 120/253 (47%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLDEGFRLKNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q +
Sbjct: 303 IMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNL 486
E + R + N+
Sbjct: 363 VDAEKMLREMLNV 375
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 138/330 (41%), Gaps = 28/330 (8%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKT---MNILLLGFKESGDVTAMEMFY 235
+ + ++ CTQ+ + EA+++ ++SR + + IL + D+
Sbjct: 14 QSYCTMIHFLCTQQMLPEAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLI 73
Query: 236 HEMVLRGF-RPSVVTYNIRID-------GYCKK--------GCFGDAMRLFEEMERVACL 279
+ GF R ++ Y + + C+K F +EE
Sbjct: 74 TAYLESGFLRDAIECYRLTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYP 133
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
SL L+H I A+ +FD + K +L+P + ++N +++ I+ DL+ L
Sbjct: 134 ASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M+ + D TY + GL K S ++ L+D M++ VP T L+ C
Sbjct: 194 KNAMQVSGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
N RVDL + ++ ++ + P + L+ GLC +G ++A + +M+++ + +
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKIT 313
Query: 460 YRMLQRYLVQANANE-----KLEDLDRMIK 484
Y L+ N E E RMIK
Sbjct: 314 YTT----LIDGNCKEGDLETAFEYRKRMIK 339
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQVSGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
FD M + V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NVLFDEMLDKGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM+++G P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMIMKGLXPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLNVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A E+ + Q P L+T ++ L + + +A D ++ I G+
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLXP-D 310
Query: 178 SEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+ L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKM 368
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 369 LREMLNVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|255660926|gb|ACU25632.1| pentatricopeptide repeat-containing protein [Neosparton
ephedroides]
Length = 484
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 111/464 (23%), Positives = 193/464 (41%), Gaps = 56/464 (12%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 128 HVQRTHPSLLTLKSMSI-MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
+ + L + M + M+ K +E+++ F +ME +G+ + + ++ L +
Sbjct: 70 DMPKK--GLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEE---LGVER-TIKSYDALFK 123
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ A+ F K+LS P T N+++ GF SG V F+ +M R P
Sbjct: 124 VIMRRGRFMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISP 183
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
V+TYN I+GYC+ +A + F EM+ P++ T TTLI G V + A +L
Sbjct: 184 DVITYNTMINGYCRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMK 364
+EM +KP+ Y+ ++ L ++ A ++ EM +K I DN + + K
Sbjct: 244 EEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSHCK 303
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG------- 417
L+ + MI + +L++ +C + D + L LI++
Sbjct: 304 VGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQS 363
Query: 418 ---------------FCPHGH--------------------ALDLLVTGLCSRGRWEEAF 442
C +G AL+ L+ G G + AF
Sbjct: 364 TLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAF 423
Query: 443 ECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
E K ML R+ +++Y ++Q YL ++ + LD MI+N
Sbjct: 424 ELLKIMLRRKVDSEKSAYDSLVQSYLKKSEPADAKAALDSMIEN 467
>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
Length = 894
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 138/296 (46%), Gaps = 8/296 (2%)
Query: 197 ARSVFVKLLSR---FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
AR ++ ++L+R ++ + +++ G G V G P V YN+
Sbjct: 258 ARRLYGEMLARDREGGADDYSTCVMVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVL 317
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
IDGYC++G G + L EME +P++ T +IH G ++ + L EM +R L
Sbjct: 318 IDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGL 377
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
P++ YN +I +L +CR + A+ ++++M R D VT++T+ + +E K
Sbjct: 378 SPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALK 437
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L I + P + L+ FCV V + +L +I RG P L L+ GL
Sbjct: 438 LLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLV 497
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRML-----QRYLVQANANEKLEDLDRMIK 484
G+ +EA ++M R+ Y +L ++ ++ A N +E L++ ++
Sbjct: 498 VSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQ 553
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 148/331 (44%), Gaps = 8/331 (2%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P+++T ++ L R S E L ++ ER + + + +N ++ A C +
Sbjct: 344 PTVVTYGAIIHWLGRKSDLTKIESLL--WEMKERGLSPNV-----QIYNTVIYALCKCRS 396
Query: 194 MKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+A +V +++ SRF P+ T N L+ F GDV E + R P+ ++Y
Sbjct: 397 ASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTP 456
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I G+C +G A L EM P + T+ LIHG + + +A + ++M +R
Sbjct: 457 LIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQ 516
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
+ PD YN +IS L + R L+AA L+ EM E+++ D Y T+ G ++S L
Sbjct: 517 VMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDAR 576
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
K+++ M E ++K +C + ++ + + G P L+ G
Sbjct: 577 KIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGY 636
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+G + A M+ RR + + +Y L
Sbjct: 637 AKKGDIKAALRFLCDMMKRRCKPNIVTYASL 667
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/407 (23%), Positives = 162/407 (39%), Gaps = 13/407 (3%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKS 141
L +E + ++ +P + ++ L + R QA +++ + R P ++T +
Sbjct: 362 LTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNT 421
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ I+ F + EA ++ RE + + L+ FC + E+ A +
Sbjct: 422 L------IAAFCREGDVEEAL-KLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLL 474
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
V+++ R P+ T+ L+ G SG V M +M R P YN+ I G CKK
Sbjct: 475 VEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKK 534
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
A L EM P TTLI G + AR++F+ M ++ DI AY
Sbjct: 535 RMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAY 594
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
NAMI + +N A+ M M + D TY T+ G K ++ + M++
Sbjct: 595 NAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMK 654
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
+ P T L+ +C D L+ + G P+ +L+ L + + +
Sbjct: 655 RRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQ 714
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQAN---ANEKLEDLDRMIK 484
A + ML+ ++A+ L L N D D+ K
Sbjct: 715 AAAYFEHMLLNHCSPNDATMHYLVNGLTNCRYGMINSNCSDTDQAHK 761
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 96/218 (44%), Gaps = 21/218 (9%)
Query: 173 IRKFGS--EEFN--VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD 227
+RK G +EF L+ + + ++K A ++ R PN T L+ G+ G+
Sbjct: 617 MRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGN 676
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+ E+ + M G P+VV Y + I KK A FE M C P+ T+
Sbjct: 677 TDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHY 736
Query: 288 LIHGA-----GLVRN-------IHQARQLFD---EMPKRNLKPDIGAYNAMISSLIRCRD 332
L++G G++ + H+ L D + L P I AYNA+I SL R
Sbjct: 737 LVNGLTNCRYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNM 796
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
L AMEL ++M K D VT+ ++ +G S G G
Sbjct: 797 LGKAMELKEKMSNKGCLPDPVTFLSLLYGF-SSVGKSG 833
>gi|297839201|ref|XP_002887482.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333323|gb|EFH63741.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 490
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 94/389 (24%), Positives = 165/389 (42%), Gaps = 22/389 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
L++ +V +L RL A FF + H++ P A+ + + IL+ +Y ++ +
Sbjct: 21 LTTPVVCKILQRLQYEEKT---AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKNKQF 77
Query: 124 ----ELMSHVQRTHPSLLTLKSMSIMLSRISKF-QSYEETLEAFDRMEREIFVGIRKFGS 178
+++ +++R +++ I+L + K+ + Y ++ F + +R IR
Sbjct: 78 RIVIDMLDYMKRNKKTVV---PADILLEILRKYCERYLTHVQKFAKRKR-----IRVKTQ 129
Query: 179 EE---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
E FN+LL A C +KE ++ ++ R P+ T N+L G+ D
Sbjct: 130 PEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDATTFNVLFFGWCRVRDPKKAMKLL 189
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---ERVACLPSLQTITTLIHGA 292
EM+ G +P TY ID +C+ G +A LFE M V P+ +T +I
Sbjct: 190 EEMIQAGHKPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTFALMIVAL 249
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +L M PD+ Y +I + + A + +DEM K D
Sbjct: 250 AKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAGKVEEAYKFLDEMSNKGYPPDI 309
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY+ L ++ + KLY RM+E + P +T ML+ F D N W
Sbjct: 310 VTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNTWKE 369
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ +R +++ GL R +EA
Sbjct: 370 MDERDCVQDIETYCVMINGLFDCHRAKEA 398
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 57/264 (21%), Positives = 113/264 (42%), Gaps = 8/264 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA++ + +Q H P + + + D+A +L + + + S T K+
Sbjct: 184 KAMKLLEEMIQAGH-KPENFTYCAAIDTFCQAGMVDEAADLFEFMITKGSVVSAPTAKTF 242
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++M+ ++K EE E RM I G S + +++ C +++EA
Sbjct: 243 ALMIVALAKNDKAEECFELIGRM---ISTGCLPDVST-YKDVIEGMCMAGKVEEAYKFLD 298
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++ ++ + P+ T N L E+ Y MV PSV TYN+ I + +
Sbjct: 299 EMSNKGYPPDIVTYNCFLRVLCENRKSDEALKLYGRMVESRCAPSVQTYNMLISMFFEMD 358
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A ++EM+ C+ ++T +I+G +A L +E+ + LK A++
Sbjct: 359 DPDGAFNTWKEMDERDCVQDIETYCVMINGLFDCHRAKEACFLLEEVVNKGLKLPYRAFD 418
Query: 322 AMISSLIRCRDLNAAMELMDEMEE 345
+ + L +L A +L + M++
Sbjct: 419 SFLMRLSTVGNLKAIHKLSEHMKK 442
>gi|125569067|gb|EAZ10582.1| hypothetical protein OsJ_00414 [Oryza sativa Japonica Group]
Length = 1003
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 191 QKEM-KEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+KE+ +EA S+ KL PN N L+ ++ + + EM RG P+ V
Sbjct: 315 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 374
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I I CK+G DA+ LF++M ++ +LI+G ++ +AR L M
Sbjct: 375 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 434
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K L P +Y+ +I+ L R DL++ MEL EM E+ I +N T+ + G K +
Sbjct: 435 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 494
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ +L+D+MI+ +P T ++++ +C+ + L+ +++ G P + L
Sbjct: 495 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 554
Query: 429 VTGLC 433
++GLC
Sbjct: 555 ISGLC 559
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 168/418 (40%), Gaps = 45/418 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P A+ + L + FD A L + + P+ +T +I++ + K E+
Sbjct: 335 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY---AILIHALCKRGMIED 391
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
L FD+M + GI K +N L+ +C Q + AR + ++ P + +
Sbjct: 392 ALCLFDKMRDK---GI-KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 447
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +GD+++ + EM RG + T+ I+G+CK +A RLF++M
Sbjct: 448 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 507
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P+ T +I G LV NI +A QL+D+M + LKPD Y ++IS L ++ A
Sbjct: 508 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 567
Query: 337 ME-----------------------------------LMDEMEEKRIGHDNVTYHTMFFG 361
E L DEM + + D V++ + +
Sbjct: 568 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 627
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K E C L+ M E P ++ + LN W ++ G+ P+
Sbjct: 628 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPN 687
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+L+ LC G A K+ML ++ +Y Y EK +DL
Sbjct: 688 TVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 745
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC K+M EA +F K++ S PN T N+++ G+ G++ Y +MV
Sbjct: 481 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 540
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P TY I G C A ++E + + ++T L++G
Sbjct: 541 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 600
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L+DEM R +K D+ ++ ++ + ++ D + L EM+E+ + D++ Y M
Sbjct: 601 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 660
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +D+M+ + P T T +L+ C + + L ++
Sbjct: 661 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 720
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + + + G E+A + ML + S S+ +L + L +A + E +
Sbjct: 721 PNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ--EAI 777
Query: 480 DRMIKNLQAVLPP 492
D M K ++ P
Sbjct: 778 DLMSKITESGFSP 790
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 102/221 (46%), Gaps = 6/221 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ M+ +SK ++ + L +D+M V + VL+ C + A +
Sbjct: 657 TCMIDALSKEENMIQALNCWDQM----VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 712
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L+ PN T N L F GD+ + H +L+G S+V++NI I G CK G
Sbjct: 713 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HSAMLQGHLASIVSFNILIKGLCKAG 771
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ L ++ P + +T+IH + +I++A +L++EM + LKPD+ AYN
Sbjct: 772 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 831
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
I + + A+ + M + + TY + G+
Sbjct: 832 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGI 872
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 141/313 (45%), Gaps = 7/313 (2%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+A E ++ ++ ++ ++L S++ +L + + ET +D M V K
Sbjct: 566 KANEFVADLENSY-AVLNNFSLTALLYGFFREGRFTETYHLWDEMA----VRGVKLDLVS 620
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +++ A Q + +++ +F ++ + P++ ++ + ++ + +MV
Sbjct: 621 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 680
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G+ P+ VT+ + I+ CK G G A L +EM LP+ T + ++
Sbjct: 681 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 740
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L M + +L I ++N +I L + + A++LM ++ E D ++Y T+
Sbjct: 741 KAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 799
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +L++ M+ P + +++ V+ D L ++ +I G
Sbjct: 800 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 859
Query: 420 PHGHALDLLVTGL 432
P+ L++G+
Sbjct: 860 PNWDTYRALLSGI 872
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 129/339 (38%), Gaps = 36/339 (10%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNIL 218
+AF ++ + +G++ + + L+ C + +A L + +A NN ++ L
Sbjct: 531 KAFQLYDQMVEMGLKP-DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 589
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L GF G T + EM +RG + +V++ I + K+ + LF EM+
Sbjct: 590 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 649
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T +I N+ QA +D+M P+ + +I++L + L +A
Sbjct: 650 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 709
Query: 339 LMDEMEEKRI--------------------------------GH--DNVTYHTMFFGLMK 364
L EM + GH V+++ + GL K
Sbjct: 710 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCK 769
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L ++ E F P + ++ C ++ LW ++ +G P A
Sbjct: 770 AGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 829
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ + G ++A M+ Q + +YR L
Sbjct: 830 YNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 868
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 118/326 (36%), Gaps = 37/326 (11%)
Query: 197 ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR +F K+L S + + + ES ++ M G + S V YN+ +
Sbjct: 182 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 241
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------AGLVR 296
G CK +A+ + M + T TL++G G V
Sbjct: 242 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 301
Query: 297 NIHQARQLFDEMPKRNL----------------KPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + DE+ K+ L P++ AYNA+I L + + A L
Sbjct: 302 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 361
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + + + VTY + L K +E L+D+M + L+ +C
Sbjct: 362 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 421
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+D L ++ G P + L+ GLC G E ++M R + ++
Sbjct: 422 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 481
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++ + +E D+MI +
Sbjct: 482 TALINGFCKDKKMDEAARLFDKMIDS 507
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+R AR LFD+M + + D Y A I + R+L+ A L+ ME + + V
Sbjct: 176 IRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVP 235
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + +GL K+ ++ ++ + M+ T L+ FC +++ L + +I
Sbjct: 236 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 295
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P ++ L + EEAF + ++ + +Y L L + NE
Sbjct: 296 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK---NE 352
Query: 475 KLEDLDRMIKNLQA 488
+ +D DR+ K +
Sbjct: 353 RFDDADRLFKEMAG 366
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 58/116 (50%), Gaps = 1/116 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L++ C +++EA + K+ S F+P+ + + ++ + GD+ ++EM+
Sbjct: 760 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 819
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+G +P VV YNI I G A+ ++ M R P+ T L+ G L+
Sbjct: 820 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLM 875
>gi|297848576|ref|XP_002892169.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338011|gb|EFH68428.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 662
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 130/277 (46%), Gaps = 3/277 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F++++ C + ++ E +VF ++ + + PN +L+ G+ ++G V H M+
Sbjct: 330 FSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMI 389
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P VVTY++ ++G CK G +AM F+ + ++LI G G +
Sbjct: 390 DEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVD 449
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTM 358
+A +LF+EM ++ D YNA+I + + ++ A+ L MEE+ V TY +
Sbjct: 450 EAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQTVYTYTIL 509
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G+ K E KL+D MI+ P + L C++ +V + L G
Sbjct: 510 ISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKILDELAPMGV 569
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
D++ T LC GR +EA + + + R R+V
Sbjct: 570 ILDAACEDMINT-LCKAGRIKEACKLADGITERGREV 605
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 43/297 (14%)
Query: 181 FNVLLQAFC----TQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+N +++ +C TQK +++ R + K L A M ++ + +S D ++ Y
Sbjct: 260 YNTMIKGYCKAGQTQKALEKLRVMETKGLE--ADKITYMTMIQACYADS-DFSSCVALYQ 316
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM +G + +++ I G CK+G + +FE M R P++ T LI G
Sbjct: 317 EMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLIDGYAKTG 376
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR-------------CR------------ 331
++ A +L M PD+ Y+ +++ L + CR
Sbjct: 377 SVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYS 436
Query: 332 ----------DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ A L +EM EK D+ Y+ + K ++ L+ RM E
Sbjct: 437 SLIDGLGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEE 496
Query: 382 KFVPKT-RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+ +T T +L+ R + L LW +ID+G P L L TGLC G+
Sbjct: 497 EGCDQTVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGK 553
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 96/228 (42%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ F + G V + + +M G P++ TYN ++G A R+FE ME
Sbjct: 191 NSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYTYNFLMNGLVSAMFVDSAERVFEVMES 250
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T T+I G +A + M + L+ D Y MI + D ++
Sbjct: 251 GRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVMETKGLEADKITYMTMIQACYADSDFSS 310
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
+ L EM+EK + + + GL K L +++ MI P +L+
Sbjct: 311 CVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLNEGYAVFENMIRKGSKPNVAIYTVLID 370
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+ V+ + L +ID GF P ++V GLC GR EEA +
Sbjct: 371 GYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVVNGLCKNGRVEEAMD 418
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 12/287 (4%)
Query: 163 DRMEREIFVGIRKFGSEEF-------NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
DR+ R I IRKF EF N L+++F ++E V+ K+ P T
Sbjct: 169 DRI-RFICSEIRKF---EFPMTVSPGNSLIKSFGKLGMVEELLWVWRKMKENGIEPTLYT 224
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G + V + E + M +P VVTYN I GYCK G A+ ME
Sbjct: 225 YNFLMNGLVSAMFVDSAERVFEVMESGRIKPDVVTYNTMIKGYCKAGQTQKALEKLRVME 284
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
T T+I + L+ EM ++ L+ A++ +I L + LN
Sbjct: 285 TKGLEADKITYMTMIQACYADSDFSSCVALYQEMDEKGLQVPPHAFSLVIGGLCKEGKLN 344
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
+ + M K + Y + G K+ +E +L RMI+ F P T +++
Sbjct: 345 EGYAVFENMIRKGSKPNVAIYTVLIDGYAKTGSVEDAIRLLHRMIDEGFNPDVVTYSVVV 404
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
C N RV+ ++ + G + L+ GL GR +EA
Sbjct: 405 NGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDGLGKAGRVDEA 451
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 133/319 (41%), Gaps = 10/319 (3%)
Query: 103 PDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
P AF + L + ++ + + ++ R S + ++++ +K S E+ +
Sbjct: 327 PHAFSLVIGGLCKEGKLNEGYAVFENMIR-KGSKPNVAIYTVLIDGYAKTGSVEDAIRLL 385
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLG 221
RM E F ++V++ C ++EA F + A N+ + L+ G
Sbjct: 386 HRMIDEGF----NPDVVTYSVVVNGLCKNGRVEEAMDYFQTCRFNGLAINSMFYSSLIDG 441
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-ACLP 280
++G V E + EM +G YN ID + K G +A+ LF+ ME C
Sbjct: 442 LGKAGRVDEAERLFEEMSEKGCTRDSYCYNALIDAFTKHGKVDEALALFKRMEEEEGCDQ 501
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ T T LI G +A +L+D M + + P A+ + L + A +++
Sbjct: 502 TVYTYTILISGMFKEHRNEEALKLWDMMIDKGITPTAACLRALSTGLCLSGKVARACKIL 561
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE-GKFVPKTRTVVMLMKFFCV 399
DE+ + D M L K+ ++ CKL D + E G+ VP VM+ V
Sbjct: 562 DELAPMGVILD-AACEDMINTLCKAGRIKEACKLADGITERGREVPGRIRTVMINALRKV 620
Query: 400 NFRVDLGLNLWGYLIDRGF 418
+ DL + L I G+
Sbjct: 621 G-KADLAMKLMHSKIGIGY 638
>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 606
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 151/333 (45%), Gaps = 24/333 (7%)
Query: 121 QAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
A ++ + ++R H P+LLT ++ L R S + + IF + KFG
Sbjct: 153 HAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSV--------CLSKAIFTNVIKFGV 204
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILL--LGFKESGDVTAMEMFYH 236
+ N L +A +MK+ S F P+N + N +L L SG +
Sbjct: 205 K--NKLSEAIGLIGKMKDF-SCF--------PDNASYNTILDVLWLCRSGKTDQSIDKLN 253
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
E++ G P +TYN I GYC++G A + +M + P L T L+ G
Sbjct: 254 ELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEG 313
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ A +LF+ + D YN +IS L + A +L+ EMEEK++G D TY+
Sbjct: 314 MLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYN 373
Query: 357 TMFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ L + G +E + ++M+E F P T +L++ C +D L L+ I
Sbjct: 374 AILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWIS 433
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+G + +++GLC GR+EEAF+ +M
Sbjct: 434 KGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEM 466
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/340 (24%), Positives = 145/340 (42%), Gaps = 38/340 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +C + ++++A K++ + F P+ T NILL G G + ++ +
Sbjct: 267 YNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWI 326
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-AGLVRNI 298
+G VTYN I G CK+G F +A L EME P T ++ A +
Sbjct: 327 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQV 386
Query: 299 HQARQLFDEMPKRNLKPDI-----------------------------------GAYNAM 323
+A Q ++M +++ KPD+ YN +
Sbjct: 387 EKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTI 446
Query: 324 ISSLIRCRDLNAAMELMDEMEEKR-IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
IS L + A +L+ EMEEK + D TY+T+ G + +E + ++M+E
Sbjct: 447 ISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEKS 506
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T +L++ C + L L+ I +G + +++GLC GR+EEAF
Sbjct: 507 FKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAF 566
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
+ +M ++ +Y + L A E E + ++
Sbjct: 567 DLLAEMKEKKLGPDCYTYNAILCALADAGRMEAEEFMSKI 606
>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
Length = 702
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 116/471 (24%), Positives = 201/471 (42%), Gaps = 41/471 (8%)
Query: 47 DQPLHPTLLQHLPQTTPLSSTLVE----------NVLGRLFAAHSNGL-------KALEF 89
D LH TL+Q L + + L + NV+ + NGL +ALE
Sbjct: 145 DVLLHSTLIQGLCRKGRIDEALEQFKSMGEECSPNVI--TYNTVVNGLCKANRIDEALEL 202
Query: 90 F-----KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
F ++ H P ++ + L + + D+A+E ++ P+++T S+
Sbjct: 203 FDDMEKRYEASH-GCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSL 261
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ + K E LE M+ + F GI +FN +L A E ++A F
Sbjct: 262 ---IDGLCKVDRPSECLELLLHMKEKGF-GINII---DFNAMLHALWKNDEQEKACQFFE 314
Query: 203 KLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+LL S PN T N+ + G ++G V EMV P V+TY+ IDG+CK G
Sbjct: 315 RLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAG 374
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A +F M C+P T TL+HG + +A ++ ++M P + YN
Sbjct: 375 RMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYN 434
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++ + + +A+E+ +M+ K+ D TY + L ++ ++ + D M
Sbjct: 435 VLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEAD 494
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
VP L++ C VD ++ +++ G P G +LV L R +WE A
Sbjct: 495 NVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAA 554
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANA-NEKLEDLDRMIKNLQAVLP 491
SK + A+Y + + +A +E +E +++M+ L+ V P
Sbjct: 555 ---SKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMV--LKGVRP 600
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 100/461 (21%), Positives = 185/461 (40%), Gaps = 50/461 (10%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
+ST+ V GR+ + A FF++ P F L+ + + ++A
Sbjct: 38 ASTVTPEVAGRVLQQVEDPDVAWTFFQWAGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHR 97
Query: 125 LMSHVQRTHPSLLTLKSM-SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFN 182
L+ + P + M + +++ K ++ E D M ER + K +
Sbjct: 98 LLK--EELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERGV-----KMDVLLHS 150
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR- 241
L+Q C + + EA F + +PN T N ++ G ++ + + +M R
Sbjct: 151 TLIQGLCRKGRIDEALEQFKSMGEECSPNVITYNTVVNGLCKANRIDEALELFDDMEKRY 210
Query: 242 ----GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG------ 291
G P V++Y+ ID CK A F+ M V C P++ T ++LI G
Sbjct: 211 EASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDR 270
Query: 292 -------------AGLVRNI----------------HQARQLFDEMPKRNLKPDIGAYNA 322
G NI +A Q F+ + K KP++ YN
Sbjct: 271 PSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNV 330
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L + ++ A ++ EM E ++ D +TY ++ G K+ ++ ++ RM+ +
Sbjct: 331 AVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHE 390
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
+P T + L+ F + + + +++ GF P ++L+ +C E A
Sbjct: 391 CIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESAL 450
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLVQA-NANEKLEDLDRM 482
E +M ++RQ +Y L + L +A +E E LD M
Sbjct: 451 EIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVM 491
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/295 (21%), Positives = 117/295 (39%), Gaps = 33/295 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ FC M +A VF +++ P+ T LL GF E + +MV
Sbjct: 363 YSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMV 422
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P + TYN+ +D C A+ ++ +M+R P T LI R +
Sbjct: 423 NAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVD 482
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE---KRIGH------ 350
+A++ D M N+ P+ +A++ L + +++ A ++D + E + +G
Sbjct: 483 EAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILV 542
Query: 351 -----------------------DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
D TY + K+ + ++ ++M+ P
Sbjct: 543 EELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDE 602
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
T V +++ C RV+ + + + RG P LL+ CS +EAF
Sbjct: 603 GTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAF 657
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/314 (20%), Positives = 130/314 (41%), Gaps = 24/314 (7%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT------ 138
KA + F + H P P F LH + + +A+ R H ++
Sbjct: 378 KADDVFTRMMVH-ECIPHPVTFMTLLHGFSEHKKSREAF-------RVHEDMVNAGFIPG 429
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
L++ ++++ + S E LE + +M+R+ R+ + L+Q C + + EA+
Sbjct: 430 LQTYNVLMDCVCGADSVESALEIYHKMKRKK----RQPDCNTYAPLIQCLCRARRVDEAK 485
Query: 199 SVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
V PN + L+ + G+V +V G +P T+ I ++
Sbjct: 486 EFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEEL 545
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
+ + A +L VA + I AG +A ++ ++M + ++PD
Sbjct: 546 YLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAG---KPDEAVEVIEQMVLKGVRPDE 602
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL-EGVCKLYD 376
G Y A++ SL + +A+ ++M + VTY T+ G S+ + + ++++
Sbjct: 603 GTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTY-TLLIGEACSADMADEAFRIFE 661
Query: 377 RMIEGKFVPKTRTV 390
M+ F P+ +T+
Sbjct: 662 AMVAAGFTPQAQTM 675
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/259 (22%), Positives = 101/259 (38%), Gaps = 12/259 (4%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
NVL + ALE + ++ P + + + L R R D+A E + ++
Sbjct: 434 NVLMDCVCGADSVESALEIYH-KMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVME 492
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
+ + + +I + + E EA ++ + VG + G E F +L++
Sbjct: 493 ADN----VVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLG-ETFKILVEELYL 547
Query: 191 QKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+K+ + A KLL F + T ++ + ++G +MVL+G RP
Sbjct: 548 RKKWEAAS----KLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEG 603
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY + C A+ FE+M C P L T T LI A +A ++F+ M
Sbjct: 604 TYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAM 663
Query: 309 PKRNLKPDIGAYNAMISSL 327
P + S L
Sbjct: 664 VAAGFTPQAQTMRTLSSCL 682
>gi|218191356|gb|EEC73783.1| hypothetical protein OsI_08468 [Oryza sativa Indica Group]
Length = 616
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 6/266 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +A S+ L RF P+ T N L G+ D + MV
Sbjct: 168 FNSLLDALSKSRHAGKAASLVRALEQRFTPDVVTYNTLADGWCRVKDTSRALDVLRLMVE 227
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER-----VACLPSLQTITTLIHGAGLV 295
G P+ TYNI + G+ + G A F +M++ +C P + + TT++HG G+
Sbjct: 228 SGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSKDESCKPDVVSYTTMVHGLGVA 287
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +AR++FDEM K P + YNA+I + + ++ A+ + D M K + VTY
Sbjct: 288 GQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVEDAVTVFDGMLVKGYVPNVVTY 347
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ GL + ++ KL +RM G P +T +L+++ ++ GL+L+ +
Sbjct: 348 TVLIRGLCHAGKIDRGLKLLERMKNGGCEPIVQTYNVLIRYLFEEGEMEKGLDLFEKMSK 407
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEE 440
C P+ +++++ + R R E+
Sbjct: 408 GEECLPNQDTYNIIISAMFMRKRAED 433
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/224 (20%), Positives = 92/224 (41%), Gaps = 8/224 (3%)
Query: 266 AMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+RLF + R L +L+ R+ +A L + +R PD+ YN +
Sbjct: 148 AVRLFLSLHRSHRVAQDLPLFNSLLDALSKSRHAGKAASLVRALEQR-FTPDVVTYNTLA 206
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI----- 379
R +D + A++++ M E I TY+ + G ++ L + +M
Sbjct: 207 DGWCRVKDTSRALDVLRLMVESGIAPTKTTYNIILKGFFRAGQLRHAWDFFLQMKKRGSK 266
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P + ++ V +++ ++ + G P + L+ +C +G E
Sbjct: 267 DESCKPDVVSYTTMVHGLGVAGQLEKARKVFDEMAKEGCAPSVATYNALIQVICKKGNVE 326
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRM 482
+A MLV+ + +Y +L R L A ++ L+ L+RM
Sbjct: 327 DAVTVFDGMLVKGYVPNVVTYTVLIRGLCHAGKIDRGLKLLERM 370
>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 670
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 24/408 (5%)
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-----QRTH 133
AH G +A+ FF H T +F L+++ + F A++ HV +
Sbjct: 137 AHLPG-EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ 195
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAF 188
P+LLT ++++ + K + ++ F M ++F ++ L+
Sbjct: 196 PNLLT---YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFT---------YSTLMNGL 243
Query: 189 CTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++ + EA + ++ + PN T N+L+ ++GD++ M L+G P+
Sbjct: 244 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 303
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTYN I G C KG A+ L E+M C+P+ T T+I+G R +
Sbjct: 304 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 363
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R K + Y+++IS L + A+ L EM EK + V Y GL +
Sbjct: 364 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 423
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ + M+ F+P T LMK F + +W ++ + + +
Sbjct: 424 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 483
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
L+ GLC GR EA ML + +Y + + L + +K
Sbjct: 484 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDK 531
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 11/326 (3%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK-EARSVFVKLLSRFAPNN--KTMN 216
+ DRM+RE + +E +L+ C + + EA + F ++ + K+ N
Sbjct: 110 QVLDRMKRE-----GRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFN 164
Query: 217 ILLLGFKESGDVTAMEMFYHEMV---LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+L + GD + FY + +GF+P+++TYN+ I CK G A+ F EM
Sbjct: 165 SVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM 224
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P + T +TL++G R + +A L DEM P+ +N +I +L + DL
Sbjct: 225 PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDL 284
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L+D M K + VTY+T+ GL L+ L ++M+ K VP T +
Sbjct: 285 SRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTI 344
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ R + G+++ + +RG + + L++GL G+ E A K+M +
Sbjct: 345 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL 479
+ + Y L + ++ ED+
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDI 430
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/312 (21%), Positives = 127/312 (40%), Gaps = 8/312 (2%)
Query: 102 TPDAFEKT--LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
PD F + ++ L + R D+A L+ +Q L + ++++ +SK
Sbjct: 230 NPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ-AEGCLPNPVTFNVLIDALSKNGDLSRAA 288
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNIL 218
+ D M F+ +N L+ C + ++ +A S+ K++S + PN T +
Sbjct: 289 KLVDNM----FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTI 344
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + M RG + + Y+ I G K+G +A+RL++EM C
Sbjct: 345 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 404
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++ I G +A + EM + P+ Y++++ + D A+
Sbjct: 405 KPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAIL 464
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ EM + + H+ V + GL +S L ++ M+ P ++K C
Sbjct: 465 VWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLC 524
Query: 399 VNFRVDLGLNLW 410
VD GL L+
Sbjct: 525 DVGSVDKGLKLF 536
>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 806
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/402 (23%), Positives = 175/402 (43%), Gaps = 38/402 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
F P + +H + + F +A++LM+ + + P+++ S S ++S +S + E
Sbjct: 240 FEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVI---SYSTVISCLSDMGNVE 296
Query: 157 ETLEAFDRM-------EREIF----------------VGIRKFGSEE--------FNVLL 185
+L F RM + F VG+ E +N L+
Sbjct: 297 LSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLI 356
Query: 186 QAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
C+ M EA SV+ ++ PN T + ++ GF +SGD+ + +++M+ G R
Sbjct: 357 HGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCR 416
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+VV Y +D C+ F A L + M C P++ T I G + A +
Sbjct: 417 PNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNV 476
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
D+M K P+I YN ++ L R A L+ E+EE+++ D VTY+T+ +G
Sbjct: 477 LDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSF 536
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL-IDRGFCPHGH 423
+ + V +L +M+ T TV + +C +V + + + ++ F
Sbjct: 537 NGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADII 596
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+++ G+C+ EEA +ML R + A++ +L R
Sbjct: 597 THTIILWGICNWLGTEEAVVYLHEMLKRGIFPNIATWNVLVR 638
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 134/298 (44%), Gaps = 16/298 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLG------FKESGDVTAMEMF 234
+ ++ + C ++ +AR +L +F P N L+ G FKE+ D+
Sbjct: 217 YTTVISSMCKLGDVDKAR----ELAMKFEPVVPVYNALIHGVCKECRFKEAFDLM----- 267
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+EMV RG P+V++Y+ I G ++ +F M C P++QT T+LI G +
Sbjct: 268 -NEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFV 326
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ A L++ M + + P++ AYN +I L +++ A+ + ++ME+ I + T
Sbjct: 327 RGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTT 386
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y T+ +G KS L C+ +++MI P ++ C D +L +I
Sbjct: 387 YSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMI 446
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
G P + + GLC GR E A QM + +Y L L +ANA
Sbjct: 447 SDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANA 504
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/367 (25%), Positives = 147/367 (40%), Gaps = 48/367 (13%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PSLLTLKSM 142
+ +LE+FK F T +E + L R D L+ ++ + P L
Sbjct: 55 VSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQELFQF 114
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I R S E+ L+ F R IR+FG E
Sbjct: 115 VIKCYRRSNLG--EQGLKMFYR--------IREFGCE----------------------- 141
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
P+ K N++L + Y+ M G P+V TYN+ + C+ G
Sbjct: 142 -------PSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGK 194
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A +L EM C P + TT+I + ++ +AR+L +P + YNA
Sbjct: 195 VDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKAREL-----AMKFEPVVPVYNA 249
Query: 323 MISSLIR-CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I + + CR A +LM+EM ++ + + ++Y T+ L +E ++ RM
Sbjct: 250 LIHGVCKECR-FKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVR 308
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P +T L+K F V RV + LW +I G P+ A + L+ GLCS G +EA
Sbjct: 309 GCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEA 368
Query: 442 FECSKQM 448
QM
Sbjct: 369 ISVWNQM 375
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 51/241 (21%), Positives = 96/241 (39%), Gaps = 11/241 (4%)
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--ERVACLP 280
+E V+++E F F+ + +TY ID + L ++M E V C
Sbjct: 50 QEHDIVSSLEYFKSLSNSGTFKHTHLTYETMIDKLGRNNEMDGVSYLLQQMKLENVPCSQ 109
Query: 281 SL-QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
L Q + + L Q ++F + + +P + YN ++ +L+ L
Sbjct: 110 ELFQFVIKCYRRSNLG---EQGLKMFYRIREFGCEPSVKIYNLVLDALLSQNLFKMINAL 166
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+ M+ + + + TY+ + L ++ ++G CKL M P + ++ C
Sbjct: 167 YNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCK 226
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
VD L F P + L+ G+C R++EAF+ +M+ R + S
Sbjct: 227 LGDVDKAREL-----AMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVIS 281
Query: 460 Y 460
Y
Sbjct: 282 Y 282
>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
At4g20090-like [Cucumis sativus]
Length = 646
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 169/408 (41%), Gaps = 24/408 (5%)
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-----QRTH 133
AH G +A+ FF H T +F L+++ + F A++ HV +
Sbjct: 113 AHLPG-EAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQ 171
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAF 188
P+LLT ++++ + K + ++ F M ++F ++ L+
Sbjct: 172 PNLLT---YNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFT---------YSTLMNGL 219
Query: 189 CTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++ + EA + ++ + PN T N+L+ ++GD++ M L+G P+
Sbjct: 220 CKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNE 279
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTYN I G C KG A+ L E+M C+P+ T T+I+G R +
Sbjct: 280 VTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMS 339
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M +R K + Y+++IS L + A+ L EM EK + V Y GL +
Sbjct: 340 MEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEK 399
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
+ + M+ F+P T LMK F + +W ++ + + +
Sbjct: 400 PDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSV 459
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
L+ GLC GR EA ML + +Y + + L + +K
Sbjct: 460 LLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDK 507
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 150/326 (46%), Gaps = 11/326 (3%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMK-EARSVFVKLLSRFAPNN--KTMN 216
+ DRM+RE + +E +L+ C + + EA + F ++ + K+ N
Sbjct: 86 QVLDRMKRE-----GRVLTETIFILIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFN 140
Query: 217 ILLLGFKESGDVTAMEMFYHEMV---LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+L + GD + FY + +GF+P+++TYN+ I CK G A+ F EM
Sbjct: 141 SVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQIDRAVDTFREM 200
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C P + T +TL++G R + +A L DEM P+ +N +I +L + DL
Sbjct: 201 PLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNVLIDALSKNGDL 260
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L+D M K + VTY+T+ GL L+ L ++M+ K VP T +
Sbjct: 261 SRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTI 320
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ R + G+++ + +RG + + L++GL G+ E A K+M +
Sbjct: 321 INGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGC 380
Query: 454 QVSEASYRMLQRYLVQANANEKLEDL 479
+ + Y L + ++ ED+
Sbjct: 381 KPNVVVYGAFIDGLCRDEKPDEAEDI 406
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/329 (21%), Positives = 135/329 (41%), Gaps = 11/329 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKT--LHILARMRYFDQAWELMSHVQRTHPSLLTLKSM 142
+A++ F+ + P PD F + ++ L + R D+A L+ +Q L +
Sbjct: 192 RAVDTFR---EMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQ-AEGCLPNPVTF 247
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++++ +SK + D M F+ +N L+ C + ++ +A S+
Sbjct: 248 NVLIDALSKNGDLSRAAKLVDNM----FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 303
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
K++S + PN T ++ G + M RG + + Y+ I G K+G
Sbjct: 304 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 363
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+RL++EM C P++ I G +A + EM + P+ Y+
Sbjct: 364 KSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYS 423
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+++ + D A+ + EM + + H+ V + GL +S L ++ M+
Sbjct: 424 SLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGE 483
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
P ++K C VD GL L+
Sbjct: 484 GLKPDVVAYSSMIKGLCDVGSVDKGLKLF 512
>gi|449444202|ref|XP_004139864.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
gi|449502917|ref|XP_004161779.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At3g15200-like [Cucumis sativus]
Length = 532
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/389 (24%), Positives = 172/389 (44%), Gaps = 20/389 (5%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQ----HPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
VL L S+ A FF + L+ FTP + + L IL + R F++ +++
Sbjct: 126 VLKVLRRHRSDWNPAFIFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLV 185
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNV 183
+ + L+ ++ S++L+R + EE + F R + +FG E F
Sbjct: 186 EMSK-RKELVNEETYSVLLNRYAAAHKVEEAISIFYRRQ--------EFGLEMNLIAFQS 236
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL C K ++ A ++F F + KT NI+L G+ G+V + F+ E++
Sbjct: 237 LLMWLCRYKHVEAAETLFHSKKHEFVTDIKTSNIILNGWCVLGNVHEAKRFWREIIESKC 296
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P + TY I+ KKG G A++LF M + +I + I +A +
Sbjct: 297 EPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALE 356
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+F EM +R ++ YN +I L + R + EL++EMEE++ G T + L
Sbjct: 357 IFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLNEMEERK-GSCWPNSVTFIYLLG 415
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHG 422
G E V L+ RM E T + L+ +++ + + + W + + G P
Sbjct: 416 SVRGPEEVPVLFQRM-ERSGCKMTSDIYNLILRLYMDWDIQERVKSTWNEMKEMGLGPDR 474
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ +++ GL +GR ++ +M ++
Sbjct: 475 RSYTIMIHGLYEKGRTKDGLRYFNEMTLK 503
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/252 (21%), Positives = 108/252 (42%), Gaps = 6/252 (2%)
Query: 233 MFYHEMVLRG-----FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
+F++ ++ RG F P V YN + K F + ++ EM + L + +T +
Sbjct: 142 IFFNWVLKRGTNEEKFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSV 201
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
L++ + +A +F + L+ ++ A+ +++ L R + + AA L + +
Sbjct: 202 LLNRYAAAHKVEEAISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHSKKHEF 261
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ D T + + G + + + +IE K P T L+ ++ L
Sbjct: 262 VT-DIKTSNIILNGWCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTAL 320
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
L+ + +RG + ++ LC + R EA E K+M R + A+Y L ++L
Sbjct: 321 KLFRAMWERGLTTDVVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHL 380
Query: 468 VQANANEKLEDL 479
+ EK+ +L
Sbjct: 381 CKIRRMEKVNEL 392
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 48/246 (19%), Positives = 93/246 (37%), Gaps = 1/246 (0%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
+F P + N +L+ + ++ EM R + TY++ ++ Y +A
Sbjct: 156 KFTPGSVIYNEILVILGKFRRFEEVDKVLVEMSKRKELVNEETYSVLLNRYAAAHKVEEA 215
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ +F + +L +L+ +++ A LF K DI N +++
Sbjct: 216 ISIFYRRQEFGLEMNLIAFQSLLMWLCRYKHVEAAETLFHS-KKHEFVTDIKTSNIILNG 274
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+++ A E+ E + D TY T+ L K L KL+ M E
Sbjct: 275 WCVLGNVHEAKRFWREIIESKCEPDIYTYGTLINSLTKKGKLGTALKLFRAMWERGLTTD 334
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
++ C R+ L ++ + +RG + + L+ LC R E+ E
Sbjct: 335 VVICNCIIDALCFKKRIPEALEIFKEMNERGCAANVATYNTLIKHLCKIRRMEKVNELLN 394
Query: 447 QMLVRR 452
+M R+
Sbjct: 395 EMEERK 400
>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
Length = 353
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 71/285 (24%), Positives = 137/285 (48%), Gaps = 3/285 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+NV++ C + + +A F+K L + PN + NI+L G + E EM
Sbjct: 30 YNVVVNGICQEGRVDDAIE-FLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEM 88
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P+VVT+N+ I C+KG A+ + E++ + C P+ + L+H + +
Sbjct: 89 GQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKM 148
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A D M R PDI +YN ++++L R +++ A+EL+ ++++K ++Y+T+
Sbjct: 149 DKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTV 208
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K+ + +L + M+ P T + C R++ + +G + D G
Sbjct: 209 IDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGI 268
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ + ++ GLC R A + M+ +E++Y +L
Sbjct: 269 RPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTIL 313
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 123/265 (46%), Gaps = 4/265 (1%)
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
K SG AM++ EM +G P +VTYN+ ++G C++G DA+ + + C P+
Sbjct: 4 KRSGYKQAMKLL-DEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ ++ G A +L EM ++ P++ +N +IS L R + A+E++++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ + ++++Y+ + K ++ D M+ P + L+ C +
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD+ + L L D+G P + + ++ GL G+ +EA E +M+ + Q +Y
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242
Query: 463 LQRYLVQANANEKLEDLDRMIKNLQ 487
+ L + +++ED R +Q
Sbjct: 243 IAAGLCR---EDRIEDAIRAFGKVQ 264
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 103/232 (44%), Gaps = 2/232 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CK+ + AM+L +EM C P + T +++G + A + +P +P+
Sbjct: 3 CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
+YN ++ L A ELM EM +K + VT++ + L + +E ++ ++
Sbjct: 63 VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
+ + P + + L+ FC ++D + ++ RG P + + L+T LC G
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLEDLDRMI-KNLQ 487
+ A E Q+ + SY + L +A E LE L+ M+ K LQ
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQ 234
>gi|13872949|dbj|BAB44054.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 909
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 122/245 (49%), Gaps = 2/245 (0%)
Query: 191 QKEM-KEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+KE+ +EA S+ KL PN N L+ ++ + + EM RG P+ V
Sbjct: 338 KKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEV 397
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I I CK+G DA+ LF++M ++ +LI+G ++ +AR L M
Sbjct: 398 TYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQGSLDRARGLLSGM 457
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K L P +Y+ +I+ L R DL++ MEL EM E+ I +N T+ + G K +
Sbjct: 458 VKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKM 517
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ +L+D+MI+ +P T ++++ +C+ + L+ +++ G P + L
Sbjct: 518 DEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSL 577
Query: 429 VTGLC 433
++GLC
Sbjct: 578 ISGLC 582
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/418 (23%), Positives = 168/418 (40%), Gaps = 45/418 (10%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P A+ + L + FD A L + + P+ +T +I++ + K E+
Sbjct: 358 VPNVFAYNALIDKLCKNERFDDADRLFKEMAGRGLEPNEVTY---AILIHALCKRGMIED 414
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
L FD+M + GI K +N L+ +C Q + AR + ++ P + +
Sbjct: 415 ALCLFDKMRDK---GI-KVTVYPYNSLINGYCKQGSLDRARGLLSGMVKEGLTPTAASYS 470
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G +GD+++ + EM RG + T+ I+G+CK +A RLF++M
Sbjct: 471 PLIAGLCRNGDLSSCMELHREMAERGIAWNNYTFTALINGFCKDKKMDEAARLFDKMIDS 530
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
+P+ T +I G LV NI +A QL+D+M + LKPD Y ++IS L ++ A
Sbjct: 531 NVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMVEMGLKPDNYTYRSLISGLCLTSGVSKA 590
Query: 337 ME-----------------------------------LMDEMEEKRIGHDNVTYHTMFFG 361
E L DEM + + D V++ + +
Sbjct: 591 NEFVADLENSYAVLNNFSLTALLYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYA 650
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
+K E C L+ M E P ++ + LN W ++ G+ P+
Sbjct: 651 ALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPN 710
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+L+ LC G A K+ML ++ +Y Y EK +DL
Sbjct: 711 TVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL 768
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 137/313 (43%), Gaps = 4/313 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ FC K+M EA +F K++ S PN T N+++ G+ G++ Y +MV
Sbjct: 504 FTALINGFCKDKKMDEAARLFDKMIDSNVIPNEVTFNVMIEGYCLVGNIRKAFQLYDQMV 563
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P TY I G C A ++E + + ++T L++G
Sbjct: 564 EMGLKPDNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTALLYGFFREGRFT 623
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L+DEM R +K D+ ++ ++ + ++ D + L EM+E+ + D++ Y M
Sbjct: 624 ETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMI 683
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +D+M+ + P T T +L+ C + + L ++
Sbjct: 684 DALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVL 743
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P+ + + + G E+A + ML + S S+ +L + L +A + E +
Sbjct: 744 PNKFTYNCFLDYFATEGDMEKAKDLHSAML-QGHLASIVSFNILIKGLCKAGKIQ--EAI 800
Query: 480 DRMIKNLQAVLPP 492
D M K ++ P
Sbjct: 801 DLMSKITESGFSP 813
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 105/228 (46%), Gaps = 8/228 (3%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ M+ +SK ++ + L +D+M V + VL+ C + A +
Sbjct: 680 TCMIDALSKEENMIQALNCWDQM----VVDGYSPNTVTHTVLINNLCKSGYLGSAELLCK 735
Query: 203 KLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L+ PN T N L F GD+ + H +L+G S+V++NI I G CK G
Sbjct: 736 EMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDL-HSAMLQGHLASIVSFNILIKGLCKAG 794
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ L ++ P + +T+IH + +I++A +L++EM + LKPD+ AYN
Sbjct: 795 KIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVAYN 854
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG--LMKSSG 367
I + + A+ + M + + TY + G LM S G
Sbjct: 855 IFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKG 902
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/313 (19%), Positives = 142/313 (45%), Gaps = 7/313 (2%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+A E ++ ++ ++ ++L S++ +L + + ET +D M G+ K
Sbjct: 589 KANEFVADLENSY-AVLNNFSLTALLYGFFREGRFTETYHLWDEMAVR---GV-KLDLVS 643
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F +++ A Q + +++ +F ++ + P++ ++ + ++ + +MV
Sbjct: 644 FTIIVYAALKQHDKEKSCVLFREMKEQGVKPDDIFYTCMIDALSKEENMIQALNCWDQMV 703
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G+ P+ VT+ + I+ CK G G A L +EM LP+ T + ++
Sbjct: 704 VDGYSPNTVTHTVLINNLCKSGYLGSAELLCKEMLAGNVLPNKFTYNCFLDYFATEGDME 763
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ L M + +L I ++N +I L + + A++LM ++ E D ++Y T+
Sbjct: 764 KAKDLHSAMLQGHL-ASIVSFNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTII 822
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L K + +L++ M+ P + +++ V+ D L ++ +I G
Sbjct: 823 HELCKMGDINKAFELWNEMLYKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQ 882
Query: 420 PHGHALDLLVTGL 432
P+ L++G+
Sbjct: 883 PNWDTYRALLSGI 895
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/339 (19%), Positives = 129/339 (38%), Gaps = 36/339 (10%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNIL 218
+AF ++ + +G++ + + L+ C + +A L + +A NN ++ L
Sbjct: 554 KAFQLYDQMVEMGLKP-DNYTYRSLISGLCLTSGVSKANEFVADLENSYAVLNNFSLTAL 612
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
L GF G T + EM +RG + +V++ I + K+ + LF EM+
Sbjct: 613 LYGFFREGRFTETYHLWDEMAVRGVKLDLVSFTIIVYAALKQHDKEKSCVLFREMKEQGV 672
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P T +I N+ QA +D+M P+ + +I++L + L +A
Sbjct: 673 KPDDIFYTCMIDALSKEENMIQALNCWDQMVVDGYSPNTVTHTVLINNLCKSGYLGSAEL 732
Query: 339 LMDEMEEKRI--------------------------------GH--DNVTYHTMFFGLMK 364
L EM + GH V+++ + GL K
Sbjct: 733 LCKEMLAGNVLPNKFTYNCFLDYFATEGDMEKAKDLHSAMLQGHLASIVSFNILIKGLCK 792
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ ++ L ++ E F P + ++ C ++ LW ++ +G P A
Sbjct: 793 AGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEMLYKGLKPDVVA 852
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ + G ++A M+ Q + +YR L
Sbjct: 853 YNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRAL 891
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/326 (20%), Positives = 118/326 (36%), Gaps = 37/326 (11%)
Query: 197 ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
AR +F K+L S + + + ES ++ M G + S V YN+ +
Sbjct: 205 ARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVPYNVLMY 264
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------------------AGLVR 296
G CK +A+ + M + T TL++G G V
Sbjct: 265 GLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMIRLGFVP 324
Query: 297 NIHQARQLFDEMPKRNL----------------KPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + DE+ K+ L P++ AYNA+I L + + A L
Sbjct: 325 SEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCKNERFDDADRLF 384
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM + + + VTY + L K +E L+D+M + L+ +C
Sbjct: 385 KEMAGRGLEPNEVTYAILIHALCKRGMIEDALCLFDKMRDKGIKVTVYPYNSLINGYCKQ 444
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+D L ++ G P + L+ GLC G E ++M R + ++
Sbjct: 445 GSLDRARGLLSGMVKEGLTPTAASYSPLIAGLCRNGDLSSCMELHREMAERGIAWNNYTF 504
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++ + +E D+MI +
Sbjct: 505 TALINGFCKDKKMDEAARLFDKMIDS 530
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 1/122 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L++ C +++EA + K+ S F+P+ + + ++ + GD+ ++EM+
Sbjct: 783 FNILIKGLCKAGKIQEAIDLMSKITESGFSPDCISYSTIIHELCKMGDINKAFELWNEML 842
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G +P VV YNI I G A+ ++ M R P+ T L+ G L+ +
Sbjct: 843 YKGLKPDVVAYNIFIRWCNVHGESDKALGIYTNMIRSGVQPNWDTYRALLSGISLMVSKG 902
Query: 300 QA 301
QA
Sbjct: 903 QA 904
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 85/194 (43%), Gaps = 3/194 (1%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+R AR LFD+M + + D Y A I + R+L+ A L+ ME + + V
Sbjct: 199 IRQFALARDLFDKMLQSGVHLDEYVYTAGIRAYCESRNLDGARGLVVRMESEGVKASAVP 258
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + +GL K+ ++ ++ + M+ T L+ FC +++ L + +I
Sbjct: 259 YNVLMYGLCKNMRVQEAVEVKNVMVNIGVTADEVTYRTLVYGFCRMEELEMALRITHDMI 318
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
GF P ++ L + EEAF + ++ + +Y L L + NE
Sbjct: 319 RLGFVPSEANCSFMIDELRKKELVEEAFSLACKLGDLGMVPNVFAYNALIDKLCK---NE 375
Query: 475 KLEDLDRMIKNLQA 488
+ +D DR+ K +
Sbjct: 376 RFDDADRLFKEMAG 389
>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g52620-like [Vitis vinifera]
Length = 879
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 92/362 (25%), Positives = 155/362 (42%), Gaps = 10/362 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL---MSHVQRTHPSLLTLKS 141
KALE + F L+ + P A L++L ++ + A +L M + + S
Sbjct: 147 KALELYYFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYS 206
Query: 142 MSIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
IM+ + K EE + DR + I + N L+ +C + +M+ A +
Sbjct: 207 TCIMVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFY-----NTLIDGYCKKGDMEMANGL 261
Query: 201 FVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F++L L F P +T ++ GF + GD A++ EM RG +V YN ID K
Sbjct: 262 FIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYK 321
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A+ E M C P + T TLI G+ + +A QL ++ + L P+ +
Sbjct: 322 HGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFS 381
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + + + A + EM E+ D VTY + GL+ + ++ + ++M+
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P +LM C F++ L ++D+ P LV G G +
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501
Query: 440 EA 441
EA
Sbjct: 502 EA 503
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 165/371 (44%), Gaps = 38/371 (10%)
Query: 103 PDAFEKT--LHILARMRYFDQA--WELMSHVQRTH-PSLLTLKSMS---IMLSRISKFQS 154
P+ F T +H + +D+A W L+ +R H P L+T ++ ++ + +
Sbjct: 377 PNKFSYTPLIHAYCKQGGYDRASNW-LIEMTERGHKPDLVTYGALVHGLVVAGEVDVALT 435
Query: 155 YEETLEAFDRMEREIF--VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PN 211
E + +ER +F GI +N+L+ C + ++ A+ + ++L + P+
Sbjct: 436 IREKM-----LERGVFPDAGI-------YNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
L+ GF +G++ + + +G P +V YN I GYCK G DAM
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M++ P T +T+I G ++ A+++F EM K KP++ Y ++I+ R
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
DL+ ++++ EM+ + + VTY + K + L ++ M+ K VP T
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663
Query: 392 MLMKFFCVNF--------------RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
L+ F N + + LN +G +I G+ P A + ++ LC G
Sbjct: 664 YLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGM 723
Query: 438 WEEAFECSKQM 448
+ A + S +M
Sbjct: 724 FRTALQLSNKM 734
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/358 (23%), Positives = 155/358 (43%), Gaps = 1/358 (0%)
Query: 79 AHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLT 138
A S +E ++ +PT +A + + ++A EL V +T+
Sbjct: 105 ARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPD 164
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ + + +L+ + K E + +D M G R + ++++ C + +++E R
Sbjct: 165 VIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGR 224
Query: 199 SVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ + PN N L+ G+ + GD+ + E+ L+GF P+V TY I+G+
Sbjct: 225 KLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGF 284
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
CKKG F RL EM ++Q T+I +I +A + + M + KPDI
Sbjct: 285 CKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDI 344
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN +IS R ++ A +L+++ K + + +Y + K G +
Sbjct: 345 VTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIE 404
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M E P T L+ V VD+ L + +++RG P ++L++GLC +
Sbjct: 405 MTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKK 462
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 128/284 (45%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ A+C Q A + +++ R P+ T L+ G +G+V +M+
Sbjct: 382 YTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKML 441
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P YNI + G CKK A L EM + LP TL+ G N+
Sbjct: 442 ERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLD 501
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+LF+ ++ + P I YNAMI + + AM ++ M+++ + D TY T+
Sbjct: 502 EARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVI 561
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K L+G K++ M++ K P T L+ FC + L ++ + G
Sbjct: 562 DGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLV 621
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ +L+ C + +A ++ML+ + ++ ++ L
Sbjct: 622 PNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYL 665
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 81/391 (20%), Positives = 148/391 (37%), Gaps = 48/391 (12%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEEF 181
WE + + +L ++L RI + E L+ FD + R + G I F +
Sbjct: 44 WEENLQTRFSESEVLASDVAHLVLDRI---RDVELGLKFFDWVSRGQYSGPINGFA---Y 97
Query: 182 NVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEMV 239
+ LL+ + E V + + +P + M+I++ + +SG V A+E++Y +
Sbjct: 98 SSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLK 157
Query: 240 LRGFRPSVVTYN---------------------------------------IRIDGYCKK 260
+ P V+ N I + G CK+
Sbjct: 158 TYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKE 217
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G + +L E+ C+P++ TLI G ++ A LF E+ + P + Y
Sbjct: 218 GKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETY 277
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
A+I+ + D A L+ EM + + + Y+T+ K + + + MIE
Sbjct: 278 GAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIE 337
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T L+ C + +V L + +G P+ + L+ C +G ++
Sbjct: 338 CGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDR 397
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
A +M R + +Y L LV A
Sbjct: 398 ASNWLIEMTERGHKPDLVTYGALVHGLVVAG 428
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 15/129 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEM------ 233
+++L+ +FC + ++ +A S F ++L ++ PN+ T N L+ GF ++G E
Sbjct: 627 YSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQE 686
Query: 234 --------FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
F+ M+ G+ P YN + C+ G F A++L +M C+P +
Sbjct: 687 NKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSF 746
Query: 286 TTLIHGAGL 294
L+HG L
Sbjct: 747 VALLHGVCL 755
>gi|356552005|ref|XP_003544362.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
repeat-containing protein At1g09680-like [Glycine max]
Length = 509
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 129/284 (45%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ C ++E R V R P+ T + L+ G + G + + + EM
Sbjct: 180 FNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMC 239
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+ VT+ + IDG CK G A++ F+ M P L T LI+G V ++
Sbjct: 240 GKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLK 299
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+L +EM L+PD + +I + D+ +A+E+ M E+ I D+V + +
Sbjct: 300 EARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLI 359
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + + ++ M+ F P T M++ FC V +G L + G
Sbjct: 360 SGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHV 419
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC +G+ + A ML ++ +Y +L
Sbjct: 420 PGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNIL 463
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/313 (24%), Positives = 131/313 (41%), Gaps = 36/313 (11%)
Query: 193 EMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
E++ + + ++++L S + PN N+L+ GF + G V + + + E+ RG RP+VV++N
Sbjct: 122 ELERSWAFYLEVLDSGYPPNFFFFNVLMHGFCKVGGVGSARLVFDEIPKRGLRPTVVSFN 181
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I G CK G + RL ME P + T + LI+G + + LFDEM +
Sbjct: 182 TLISGCCKAGAVEEGFRLKGVMESERVCPDVFTFSALINGLCKEGRLDEGSLLFDEMCGK 241
Query: 312 NL-----------------------------------KPDIGAYNAMISSLIRCRDLNAA 336
L +PD+ YNA+I+ L + DL A
Sbjct: 242 GLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYNALINGLCKVGDLKEA 301
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L++EM + D +T+ T+ G K +E ++ RM+E +L+
Sbjct: 302 RRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEEGIELDDVAFTVLISG 361
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
C + RV + ++ GF P ++V C +G F+ K+M
Sbjct: 362 LCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMGFKLLKEMQSDGHVPG 421
Query: 457 EASYRMLQRYLVQ 469
+Y L L +
Sbjct: 422 VVTYNALMNGLCK 434
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 125/305 (40%), Gaps = 15/305 (4%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMERE-----IFVGIRKFGSEEFNVLLQAFCTQK 192
T+ S + ++S K + EE ME E +F F+ L+ C +
Sbjct: 176 TVVSFNTLISGCCKAGAVEEGFRLKGVMESERVCPDVFT---------FSALINGLCKEG 226
Query: 193 EMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+ E +F ++ + PN T +L+ G + G V + M+ +G RP +VTYN
Sbjct: 227 RLDEGSLLFDEMCGKGLVPNGVTFTVLIDGQCKGGKVDLALKNFQMMLAQGVRPDLVTYN 286
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I+G CK G +A RL EM P T TTLI G ++ A ++ M +
Sbjct: 287 ALINGLCKVGDLKEARRLVNEMSASGLRPDRITFTTLIDGCCKYGDMESALEIKRRMVEE 346
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ D A+ +IS L R ++ A ++ +M D+ TY + K +
Sbjct: 347 GIELDDVAFTVLISGLCRDGRVHDAERMLRDMLSAGFKPDDPTYTMVVDCFCKKGNVXMG 406
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
KL M VP T LM C +V L +++ G P+ ++L+ G
Sbjct: 407 FKLLKEMQSDGHVPGVVTYNALMNGLCKQGQVKNAKMLLDAMLNVGVAPNDITYNILLEG 466
Query: 432 LCSRG 436
G
Sbjct: 467 HSKHG 471
>gi|212274591|ref|NP_001130971.1| GTP binding protein [Zea mays]
gi|194690592|gb|ACF79380.1| unknown [Zea mays]
gi|413947420|gb|AFW80069.1| GTP binding protein [Zea mays]
Length = 535
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/373 (22%), Positives = 168/373 (45%), Gaps = 10/373 (2%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTL 139
SN AL FF + P + A+ + L IL RM+ +L + + ++T
Sbjct: 122 SNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEERRQVVVTN 181
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K +++L+R + +E +E F + ++ + G F +LL + C K ++EA +
Sbjct: 182 KMFAVLLNRYAGAHKVQEAIEVF-YLRKDYGFELDLVG---FQILLMSLCRYKHVEEAEA 237
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
+F + F K+ NI+L G+ G + + +++++ + T+ I+ K
Sbjct: 238 LFREKKDEFPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFINALAK 297
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A++LF++M P + +I + I +A ++F EM R + D+
Sbjct: 298 NGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQADVAT 357
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I + + + + EL+D+ME K +N TY + L + + V L RM
Sbjct: 358 YNTLIKYMCKIKRMEKVYELLDDMEAKGCPPNNRTYS---YILKTTEKPKDVIALMQRME 414
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGL-NLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+ +++ + + ++ + G+ +W + RG P + ++V GL S+G+
Sbjct: 415 RTGCKLDSDIYNLILNLY-IKWKYEKGMQQIWDEMERRGSGPDQRSFTIMVHGLHSQGKL 473
Query: 439 EEAFECSKQMLVR 451
+EA + M R
Sbjct: 474 DEALQYYTTMKSR 486
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 52/282 (18%), Positives = 115/282 (40%), Gaps = 6/282 (2%)
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--E 274
+++L + S A+ F L G+ Y +D + +LF+E+ E
Sbjct: 114 LMVLQKQRSNWQVALAFFNWAATLPGYAHGSRAYTEMLDILGRMKKVRHMRQLFDEIPEE 173
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
R + + + L++ + +A ++F + D+ + ++ SL R + +
Sbjct: 174 RRQVVVTNKMFAVLLNRYAGAHKVQEAIEVFYLRKDYGFELDLVGFQILLMSLCRYKHVE 233
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L E +++ H +++ + G L ++++ +I K T +
Sbjct: 234 EAEALFREKKDE-FPHVTKSWNIILNGWCVKGSLRDAQRIWNDIIASKVERDLFTFGTFI 292
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
N R+ + L+ + ++G P + ++ LC + + EA E +M R Q
Sbjct: 293 NALAKNGRISAAVKLFKQMWEKGINPDVAICNCIIDQLCFKKKIPEALEIFGEMNDRLCQ 352
Query: 455 VSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQ 496
A+Y L +Y+ + EK+ +L + +++A PP +
Sbjct: 353 ADVATYNTLIKYMCKIKRMEKVYEL---LDDMEAKGCPPNNR 391
>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 605
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 95/344 (27%), Positives = 152/344 (44%), Gaps = 19/344 (5%)
Query: 129 VQRTH--PSLLTLKSMSIMLSRI-SKFQSYEETLEAFDRMEREIFVGIRKFGSE----EF 181
++R H P+LLTL ++ L R SK Y + + IF + K G E F
Sbjct: 1 MKRLHLKPNLLTLNTLIKALVRYPSKPSVY---------LSKAIFSDVIKLGVEVNTNTF 51
Query: 182 NVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N+L+ C + ++ EA + K+ S F P+N + N +L + G + +M
Sbjct: 52 NILICGCCIENKLSEAIGLIGKMKHFSCF-PDNVSYNTILDVLCKKGKLNEARDLLLDMK 110
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ T+NI + GYCK G +A + + M R LP ++T TTLI G I
Sbjct: 111 NNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKID 170
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +L DEM L P + YN +I+ C EL+DEME K + + VTY+ +
Sbjct: 171 EAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVV 230
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+K ++ +M E F P T L +C R+ + + +G
Sbjct: 231 KWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLK 290
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ L+ ++ LC + ++A++ R V E SY L
Sbjct: 291 MNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 334
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 94/418 (22%), Positives = 180/418 (43%), Gaps = 43/418 (10%)
Query: 98 HFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
HF+ PD ++ L +L + ++A +L+ + + + + +I++S K
Sbjct: 76 HFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM-KNNGLFPNRNTFNILVSGYCKLGWL 134
Query: 156 EETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
+E E D M R + +R + L+ C ++ EA + ++ + + P+
Sbjct: 135 KEAAEVIDIMARNNVLPDVRTY-----TTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVV 189
Query: 214 TMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N+L+ G F+ S + E+ EM +G +P+ VTYN+ + Y K+G +A +
Sbjct: 190 TYNMLINGCFECSSSLKGFELI-DEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRK 248
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
ME P T TL +G + +A ++ DEM ++ LK + N ++ +L R
Sbjct: 249 MEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERK 308
Query: 333 LNAAMELM-------------------------------DEMEEKRIGHDNVTYHTMFFG 361
L+ A +L+ DEM+EK I +TY TM G
Sbjct: 309 LDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGG 368
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L +S + + ++E VP T ++ +C +VD + ++ + F P
Sbjct: 369 LCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPD 428
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++LV GLC+ G ++A + K + + + + ++ + L + E+ DL
Sbjct: 429 LFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDL 486
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 162/392 (41%), Gaps = 47/392 (11%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
+++ P + F + ++ + +A E++ + R + L +++ + ++ + K
Sbjct: 109 MKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARNNV-LPDVRTYTTLIGGLCKDG 167
Query: 154 SYEETLEAFDRMER------EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR 207
+E D ME + + G E + L+ F EM E + V
Sbjct: 168 KIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEM-EGKGV------- 219
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
PN T N+++ + + G + +M GF P VT+N +GYCK G +A
Sbjct: 220 -KPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAF 278
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL----------------------- 304
R+ +EM R + T+ T++H R + A +L
Sbjct: 279 RMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 338
Query: 305 --------FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+DEM ++ + P I Y MI L R + +++ +E+ E + D TY+
Sbjct: 339 FKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYN 398
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G + ++ ++M++ F P T +L++ C +D L L+ I +
Sbjct: 399 TIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISK 458
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G + +++GLC GR+EEAF+ +M
Sbjct: 459 GKAIDAVTFNTIISGLCEEGRFEEAFDLLAEM 490
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/312 (20%), Positives = 121/312 (38%), Gaps = 15/312 (4%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLT 138
S+ LK E ++ P + + + D A + ++ + P +T
Sbjct: 202 SSSLKGFELID-EMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVT 260
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
++S + + E D M R+ K S N +L C ++++ +A
Sbjct: 261 FNTLSNGYCKAGRLS---EAFRMMDEMSRKGL----KMNSVTLNTILHTLCGERKLDDAY 313
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ R + + + L++G+ + G + EM + PS++TY I G
Sbjct: 314 KLLSSASKRGYFVDEVSYGTLIMGYFKVGK----SXXWDEMKEKEIIPSIITYGTMIGGL 369
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G ++ E+ +P T T+I G + +A ++M K++ KPD+
Sbjct: 370 CRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDL 429
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
N ++ L L+ A++L K D VT++T+ GL + E L
Sbjct: 430 FTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAE 489
Query: 378 MIEGKFVPKTRT 389
M E K P T
Sbjct: 490 MEEKKLGPDCYT 501
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/237 (20%), Positives = 99/237 (41%), Gaps = 17/237 (7%)
Query: 243 FRPSVVTYNIRIDG----------YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+P+++T N I Y K F D ++L E+ + T LI G
Sbjct: 6 LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEV-------NTNTFNILICGC 58
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ + +A L +M + PD +YN ++ L + LN A +L+ +M+ + +
Sbjct: 59 CIENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNR 118
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
T++ + G K L+ ++ D M +P RT L+ C + ++D L
Sbjct: 119 NTFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDE 178
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + PH ++L+ G + FE +M + + + +Y ++ ++ V+
Sbjct: 179 MENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235
>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g74580 [Vitis vinifera]
gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
Length = 764
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 99/436 (22%), Positives = 181/436 (41%), Gaps = 48/436 (11%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
LL ++P SS + + F ++ ++A E F+ L P AF K +H L
Sbjct: 168 LLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLG-LGICPDIMAFNKLIHTL 226
Query: 114 ARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
R + ++ L++ V + P+L T+
Sbjct: 227 CRKGHVQESERLLNKVLKRGVSPNLFTV-------------------------------- 254
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAM 231
N+ +Q FC + + EA + + P+ T N L+ G ++ V
Sbjct: 255 ----------NIFIQGFCQRAMLNEAIRLLDGVGRGLTPDVITYNTLICGLCKNFKVVEA 304
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
E + +MV G+ P TYN IDGYCK G +A ++ + +P T +LI+G
Sbjct: 305 EHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLING 364
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+I +A +F+E ++ LKP++ N ++ L + + A++LM+EM E D
Sbjct: 365 LCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPD 424
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY+ + GL K + L I +P T L+ +C ++D + +
Sbjct: 425 IWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVD 484
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+ + G P + ++ GLC G++E+ K M+ + + +Y +L +A
Sbjct: 485 RMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKA- 543
Query: 472 ANEKLEDLDRMIKNLQ 487
K+E+ +I+ +Q
Sbjct: 544 --RKVEEALNLIEEMQ 557
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/263 (23%), Positives = 118/263 (44%), Gaps = 2/263 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+++ C + +A ++ + +++ P+ T N L+ G+ + + M
Sbjct: 428 YNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMW 487
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V+TYN ++G CK G + D M F+ M C+P++ T L R +
Sbjct: 488 NHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVE 547
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK-RIGHDNVTYHTM 358
+A L +EM + L PD+ + ++ DL+ A +L ++E+ + H TY+ M
Sbjct: 548 EALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIM 607
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+ KL+++M E F P + T +++ FC ++ G + I++G
Sbjct: 608 INAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGL 667
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
P ++ LC + R EA
Sbjct: 668 IPSLTTFGRVLNCLCLKRRVHEA 690
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 120/267 (44%), Gaps = 10/267 (3%)
Query: 177 GSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
G + ++LQA EM E + +P+ T N+++ G + G V+ +
Sbjct: 399 GLSQQGLILQALKLMNEMSE---------NGCSPDIWTYNLVINGLCKIGCVSDADNLVI 449
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+ + +G P V T+N IDGYCKK +A+ + + M P + T ++++G
Sbjct: 450 DAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAG 509
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
F M ++ P+I YN + S + R + A+ L++EM+ K + D V +
Sbjct: 510 KYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFG 569
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
T+ G + L+G +L+ R+ E KF T +++ F +++ L+ + +
Sbjct: 570 TLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCE 629
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAF 442
GF P + +++ G C G +
Sbjct: 630 NGFSPDSYTYRVMIDGFCKTGNINSGY 656
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 110/242 (45%), Gaps = 2/242 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ +C + ++ A + ++ + +P+ T N +L G ++G + + M+
Sbjct: 463 FNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMM 522
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYNI + +CK +A+ L EEM+ P + TL+ G ++
Sbjct: 523 EKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLD 582
Query: 300 QARQLFDEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A QLF + ++ I YN MI++ ++N A +L ++M E D+ TY M
Sbjct: 583 GAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVM 642
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K+ + IE +P T ++ C+ RV + + ++ +G
Sbjct: 643 IDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGI 702
Query: 419 CP 420
P
Sbjct: 703 VP 704
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/422 (20%), Positives = 168/422 (39%), Gaps = 43/422 (10%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAW 123
+S L+ + + N LKALE F + F T ++ + L F+
Sbjct: 1 MSPALLPKHVAAVVKYQKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAME 60
Query: 124 ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
E+++ + + L + + + + + EA D ER F + +N
Sbjct: 61 EVLAETRMNIDNGLL---EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEP-SVQSYNA 116
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
++ + +A V++++ + P+ T I + F + A + M +G
Sbjct: 117 IMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQG 176
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
S V Y I G+ ++ +A LFEEM + P + LIH ++ ++
Sbjct: 177 CESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESE 236
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L +++ KR + P++ N I + LN A+ L+D + + + D +TY+T+ GL
Sbjct: 237 RLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGL 295
Query: 363 MK--------------------------SSGLEGVCK----------LYDRMIEGKFVPK 386
K +S ++G CK L D +G FVP
Sbjct: 296 CKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKG-FVPD 354
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C + +D +N++ +++G P+ + LV GL +G +A +
Sbjct: 355 ESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMN 414
Query: 447 QM 448
+M
Sbjct: 415 EM 416
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 13/188 (6%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQK 192
P+++T +I+ K + EE L + M+ + + FG+ L++ FC
Sbjct: 528 PNIITY---NILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGT-----LMKGFCDNG 579
Query: 193 EMKEARSVF--VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ A +F V +F+ T NI++ F ++ E +++M GF P TY
Sbjct: 580 DLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTY 639
Query: 251 NIRIDGYCKKGCFGDAMR-LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
+ IDG+CK G L ++E+ +PSL T +++ L R +H+A + M
Sbjct: 640 RVMIDGFCKTGNINSGYSFLLVKIEK-GLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMV 698
Query: 310 KRNLKPDI 317
+ + P++
Sbjct: 699 HKGIVPEV 706
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 123/271 (45%), Gaps = 26/271 (9%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
A+E+F GF+ +++TY I+ K G G+ FE ME V + L+
Sbjct: 23 ALEIFNSVKKEDGFKHTLLTYKGMIE---KLGFHGE----FEAMEEVLAETRMNIDNGLL 75
Query: 290 HGA--GLVRN------IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
G G +RN I +A +F+ M N +P + +YNA+++ L+ R + A ++
Sbjct: 76 EGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYM 135
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVN 400
M +K I D T+ ++S +L + M +G ++ F+ N
Sbjct: 136 RMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEEN 195
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML--VRRRQVSEA 458
RV+ L+ ++ G CP A + L+ LC +G +E S+++L V +R VS
Sbjct: 196 HRVE-AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQE----SERLLNKVLKRGVSPN 250
Query: 459 SYRM---LQRYLVQANANEKLEDLDRMIKNL 486
+ + +Q + +A NE + LD + + L
Sbjct: 251 LFTVNIFIQGFCQRAMLNEAIRLLDGVGRGL 281
>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
Length = 580
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 130/284 (45%), Gaps = 1/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + ++ ++ AR + + + P++ T L+ G + G + + +MV
Sbjct: 211 YNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMV 270
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VTYN IDGYC KG A +EM + +PS+ T L+H + +
Sbjct: 271 EIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMG 330
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A + EM K+ + PD YN +I+ RC + A +L +EM K I +VTY ++
Sbjct: 331 EADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+ L + + ++ L++++++ P ++ C N V+ L + +
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ G C G+ EEA +M R + SY L
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTL 494
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 127/277 (45%), Gaps = 3/277 (1%)
Query: 191 QKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ ++K+AR F+ + F PN + N ++ G+ G++ M ++G P
Sbjct: 186 EGKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSY 244
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY I G CK+G +A LF++M + +P+ T TLI G ++ +A DEM
Sbjct: 245 TYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEM 304
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
K+ + P + YN ++ +L + A +++ EM +K I D +TY+ + G +
Sbjct: 305 VKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ L++ M+ P T L+ R+ +L+ ++D+G P + +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
+ G C+ G E AF K+M + E ++ L +
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 461
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 140/318 (44%), Gaps = 5/318 (1%)
Query: 167 REIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLG 221
R I +R G E + L+ C + ++EA +F K++ PN T N L+ G
Sbjct: 228 RRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDG 287
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ GD+ + EMV +G PSV TYN+ + +G G+A + +EM + +P
Sbjct: 288 YCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPD 347
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
T LI+G N +A L +EM + ++P Y ++I L R + A +L +
Sbjct: 348 AITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFE 407
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
++ ++ + D + ++ M G + +E L M P T LM+ C
Sbjct: 408 KILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREG 467
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
+V+ L + RG P + + L++G RG ++AF +ML + +Y
Sbjct: 468 KVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYN 527
Query: 462 MLQRYLVQANANEKLEDL 479
L + L + + E+L
Sbjct: 528 ALIKCLCKNQEGDLAEEL 545
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 90/386 (23%), Positives = 162/386 (41%), Gaps = 46/386 (11%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSM 142
KA EF F ++ F P ++ +H + + A ++ V+ P T S+
Sbjct: 191 KAREFIGF-MEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSL 249
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+S + K EE FD+M + +G+ + +N L+ +C + +++ A S
Sbjct: 250 ---ISGMCKEGRLEEASGLFDKM---VEIGLVP-NAVTYNTLIDGYCNKGDLERAFSYRD 302
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++ + P+ T N+L+ G + + EM +G P +TYNI I+GY + G
Sbjct: 303 EMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCG 362
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A L EM P+ T T+LI+ + +A LF+++ + + PD+ +N
Sbjct: 363 NAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFN 422
Query: 322 AMISSLI---------------------------------RCRD--LNAAMELMDEMEEK 346
AMI RCR+ + A L+DEM+ +
Sbjct: 423 AMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
I D+++Y+T+ G + ++ + D M+ F P T L+K C N DL
Sbjct: 483 GIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLA 542
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGL 432
L ++++G P L+ G+
Sbjct: 543 EELLKEMVNKGISPDDSTYLSLIEGM 568
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 15/247 (6%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ + + + + N+L ++ N +A + L PT + +++L
Sbjct: 335 MIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSK-GIEPTHVTYTSLIYVL 393
Query: 114 ARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+R +A +L + Q P ++ +M + + E M+R
Sbjct: 394 SRRNRMKEADDLFEKILDQGVSPDVIMFNAM---IDGHCANGNVERAFMLLKEMDR---- 446
Query: 172 GIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ +E FN L+Q C + +++EAR + ++ R P++ + N L+ G+ GD+
Sbjct: 447 --KSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDI 504
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM+ GF P+++TYN I CK A L +EM P T +L
Sbjct: 505 KDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSL 564
Query: 289 IHGAGLV 295
I G G V
Sbjct: 565 IEGMGNV 571
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 90/197 (45%), Gaps = 10/197 (5%)
Query: 298 IHQARQLFDEMPKRNLKPD-IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I R+LFDE+ L D + ++++ L+ + L A E + ME + V+Y+
Sbjct: 157 IATNRELFDEL---TLSRDRLSVKSSIVFDLLEGK-LKKAREFIGFMEGLGFKPNVVSYN 212
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G +EG ++ D M P + T L+ C R++ L+ +++
Sbjct: 213 TIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEI 272
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P+ + L+ G C++G E AF +M+ + S ++Y +L L ++
Sbjct: 273 GLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG---RM 329
Query: 477 EDLDRMIKNL--QAVLP 491
+ D MIK + + ++P
Sbjct: 330 GEADDMIKEMRKKGIIP 346
>gi|255660816|gb|ACU25577.1| pentatricopeptide repeat-containing protein [Junellia seriphioides]
Length = 418
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 154/342 (45%), Gaps = 19/342 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM-SHVQRTHPSLLTLKSMSI 144
A+E ++ T +H P D K L L +++YF W ++ +P+ +L +I
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RS 199
++ R K E ++ + +F I K+G + FN L+ + ++ E R
Sbjct: 142 LMHRFCK--------EGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
S P+ T ++L+ G KES A E+F +EM+ G P+ VT+ IDG+C
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDYANELF-NEMLDNGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M + P L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 253 KNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKV 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL A E M ++ I D+V Y + GL + K+ M
Sbjct: 313 TYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ P+ T M++ FC V G L + G+ P
Sbjct: 373 LSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVP 414
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY + + G+ S+ +NI + +CK+G A +F+ + + P+ + TL++G
Sbjct: 123 FYEDSLECGYPASLYFFNILMHRFCKEGEIKLAQSVFDAITKWGLRPTAVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL +EM + + + V
Sbjct: 183 RLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDYANELFNEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 129/309 (41%), Gaps = 4/309 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGQGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +E+ SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEDSLECGYPASLYFFNILMHRFCKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P ++N +++ IR DL+ L + M+ + D TY
Sbjct: 151 EIKLAQSVFDAITKWGLRPTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L++ M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDYANELFNEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P + L+ GLC +G ++A + +M ++ + + +Y ++ + +
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETA 330
Query: 476 LEDLDRMIK 484
E RMIK
Sbjct: 331 FEYRKRMIK 339
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/257 (21%), Positives = 102/257 (39%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
PT +F ++ R+ D+ + L + +Q + P + T S++++ + K +
Sbjct: 169 PTAVSFNTLMNGYIRLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDYA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E F+ M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFNEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P VTY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKVTYTTLIDGSCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLMKEMQRDGYVPSV 416
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGSCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLMKEMQRDGYVPSVVT 418
>gi|255660786|gb|ACU25562.1| pentatricopeptide repeat-containing protein [Verbena canescens]
Length = 418
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 148/352 (42%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + +MI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/298 (23%), Positives = 126/298 (42%), Gaps = 7/298 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKE 324
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKKMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 45.1 bits (105), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + +++ A K++ ++ L+ G + G E EM+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKKMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|357498925|ref|XP_003619751.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355494766|gb|AES75969.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 562
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/316 (23%), Positives = 152/316 (48%), Gaps = 17/316 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ + C K +A ++ +++S R P+ T N L+ GF G + +++M
Sbjct: 244 YNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAIGLFNKMT 303
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P V T+NI +D +CK+G +A M + P + T +L+ LV ++
Sbjct: 304 SENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRYCLVNEVN 363
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ +F+ M R + ++ +Y+ MI+ + + ++ AM+L EM K+I + +TY ++
Sbjct: 364 KAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSSLI 423
Query: 360 FGLMKSS----GLEGVCKLYDRMIEGKFVPKTR------------TVVMLMKFFCVNFRV 403
GL KS LE +++DR + + TR T +L+ C R+
Sbjct: 424 DGLCKSGRISYALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRL 483
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ N++ L+ +G+ + +++ G C++G ++EA +M + +Y ++
Sbjct: 484 EDARNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEII 543
Query: 464 QRYLVQANANEKLEDL 479
R L + N+K E+
Sbjct: 544 IRSLFDNDENDKAENF 559
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 95/212 (44%)
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
+P++V YN ID CK DA L+ EM P + T LI+G +V + A
Sbjct: 237 LQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALINGFCIVGKLKDAI 296
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LF++M N+ PD+ +N ++ + + + A + M ++ I D VTY+++
Sbjct: 297 GLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDVVTYNSLMDRY 356
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ + +++ M R+ +++ FC VD + L+ + + P+
Sbjct: 357 CLVNEVNKAKSIFNTMSHRGVTANVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNV 416
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
L+ GLC GR A E + +M R +Q
Sbjct: 417 ITYSSLIDGLCKSGRISYALELNDEMHDRGQQ 448
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 23/170 (13%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVGIRKFGSEEFNVLLQAFCTQKEMKE 196
++S SIM++R K + ++ ++ F M ++IF + + S L+ C +
Sbjct: 380 NVRSYSIMINRFCKIKMVDQAMKLFKEMHHKQIFPNVITYSS-----LIDGLCKSGRISY 434
Query: 197 ARSVFVKLLSR-----------------FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
A + ++ R PN T IL+ G + G + + +++
Sbjct: 435 ALELNDEMHDRGQQPDIITLTRQLKDQGIRPNMFTYTILIDGLCKGGRLEDARNIFEDLL 494
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
++G+ +V TY + I G+C KG F +AM L +M+ C+P+ T +I
Sbjct: 495 VKGYNITVNTYTVMIHGFCNKGLFDEAMTLLSKMKDNCCIPNAVTYEIII 544
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 29/141 (20%), Positives = 60/141 (42%), Gaps = 1/141 (0%)
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A ++L+ ++ K + + V Y+T+ + K LY M+ + P T L+
Sbjct: 224 APLQLLRRVDGKLLQPNLVMYNTIIDSMCKDKLDNDAFDLYSEMVSKRIFPDVNTYNALI 283
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
FC+ ++ + L+ + P + ++LV C GR +EA M+ + +
Sbjct: 284 NGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 343
Query: 455 VSEASYR-MLQRYLVQANANE 474
+Y ++ RY + N+
Sbjct: 344 PDVVTYNSLMDRYCLVNEVNK 364
>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g48810-like [Glycine max]
Length = 664
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 133/288 (46%), Gaps = 3/288 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N LL C + EA V ++ PN T + L+ GF ++GD+ +++M
Sbjct: 355 YNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKM 414
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G RP+VV Y +D CK F A RL + M C P++ T T I G +
Sbjct: 415 VNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRV 474
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A ++ D+M + PD YN ++ L +L A EL+ E+EE+++ + VTY+T+
Sbjct: 475 LWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTV 534
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI-DRG 417
+G E V ++ RM+ P TV +++ + +V + + +
Sbjct: 535 MYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKE 594
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
CP A L+ G+C+ EEA +ML + + A++ +L R
Sbjct: 595 LCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVR 642
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/272 (24%), Positives = 115/272 (42%), Gaps = 7/272 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFKESGDVTAMEMFYHE 237
+ ++ A C ++EAR V RF N L+ G G V + E
Sbjct: 217 SYTTVVAAMCEDGRVEEAREV----ARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDE 272
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G P+VV+Y+ I G A+ + +M R C P++ T ++L+ G L
Sbjct: 273 MVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGR 332
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYH 356
+ + L+ M ++P++ YN +++ L +L A+++ ME+ NV TY
Sbjct: 333 VGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYS 392
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ G +K+ L+G +++++M+ P ++ C N D L +
Sbjct: 393 TLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATD 452
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G P + + GLC GR A QM
Sbjct: 453 GCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQM 484
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/400 (24%), Positives = 151/400 (37%), Gaps = 44/400 (11%)
Query: 52 PTLLQHLPQTTPLSST--LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKT 109
P +L P P SS L E+ + N L AL+ F++ F TP +
Sbjct: 20 PLVLATRPLNPPPSSASLLHESHVAHALRREPNVLYALQHFQYLTNTLAFKHTPLTYHVM 79
Query: 110 LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
+ L R D A + H + + S +L+ + L+ F R
Sbjct: 80 IEKLGRNSELD-ALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYR----- 133
Query: 170 FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVT 229
I++FG K ++ LL LLG ESG+
Sbjct: 134 ---IKEFGC----------------KPTVKIYNHLLDA-----------LLG--ESGNKF 161
Query: 230 AM-EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
M Y M G P+V TYN+ + CK G A +L EM + C+P + TT+
Sbjct: 162 HMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTV 221
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ + +AR++ + + NA+I L R + LMDEM +
Sbjct: 222 VAAMCEDGRVEEAREVARRFGAEGV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGV 278
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ V+Y ++ L +E + +MI P T LMK + + RV G+
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVG 338
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
LW ++ G P+ + L+ GLC G EA + +M
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRM 378
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 142/320 (44%), Gaps = 9/320 (2%)
Query: 174 RKFGSEEF----NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
R+FG+E N L+ C + + E + +++ PN + + ++ + G+V
Sbjct: 239 RRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEV 298
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+M+ RG RP+V T++ + GY G G+ + L+ M P++ TL
Sbjct: 299 ELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTL 358
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNL-KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
++G N+ +A + M K +P++ Y+ ++ ++ DL A E+ ++M
Sbjct: 359 LNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCG 418
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
+ + V Y +M L K+S + +L D M P T +K C RV +
Sbjct: 419 VRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAM 478
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ + G P + L+ GL S +EA E +++ R+ +++ +Y + Y
Sbjct: 479 RVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVM-YG 537
Query: 468 VQANANEK--LEDLDRMIKN 485
++ E+ L+ L RM+ N
Sbjct: 538 FSSHGKEEWVLQVLGRMLVN 557
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/307 (18%), Positives = 123/307 (40%), Gaps = 35/307 (11%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T ++++ + ++ A+ H+M + S ++ ++ Y G A+++F +
Sbjct: 75 TYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVLNSYKNSGLGDRALKMFYRI 134
Query: 274 ERVACLPSLQTITTLIHGA-GLVRN-IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ C P+++ L+ G N H +++ M ++P++ YN ++ +L +
Sbjct: 135 KEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNG 194
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE---------------------- 369
L+ A +L+ EM ++ D V+Y T+ + + +E
Sbjct: 195 KLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALI 254
Query: 370 -GVCK---------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+C+ L D M+ P + ++ + V+L L + G +I RG
Sbjct: 255 CGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCR 314
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
P+ H L+ G GR E + M++ + + Y +L N E ++
Sbjct: 315 PNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDV 374
Query: 479 LDRMIKN 485
RM K+
Sbjct: 375 CGRMEKD 381
>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
Length = 647
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 176/401 (43%), Gaps = 23/401 (5%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFF-----KFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
++ N++ R A N AL +F L H F P A K + +
Sbjct: 219 DVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVK 278
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
+ E +R P+L T S+ ++ + E L+ + +ER + S
Sbjct: 279 KMSE-----RRCFPTLFTYTSLVDGFLKLGRLD--EALLQLKEAVERGFIPDAVTYTS-- 329
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ C ++E F ++ +R + P+ T L+ GF ++ + Y +M+
Sbjct: 330 ---IIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQML 386
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G S VTYNI +DG CK G +A F ME C+ ++ T + L+ G N+
Sbjct: 387 QSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVS 446
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LF M R +P++ +YN +I L R L A +++ ++R+ D T+++
Sbjct: 447 AAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFL 506
Query: 360 FGLMK--SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
GL + + +GV +L++ M+ P + +LM C +++ L ++ ++ RG
Sbjct: 507 HGLCQRLDTVGDGV-ELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRG 565
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
P + L+ LC GR +EA E +++ RR +A
Sbjct: 566 VAPDVVVFNTLIRWLCIAGRVDEALEVFREL--ERRSAPDA 604
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/322 (24%), Positives = 131/322 (40%), Gaps = 39/322 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F V++ C +K + EA SV + + + P+ T N+ + G ++ V +M
Sbjct: 44 FTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMD 103
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ VTY +DG K G +AM + E+M P+L+T T +I G +
Sbjct: 104 EKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVE 163
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE----KRIGHDNVTY 355
+AR++F +M +PD Y A+IS L + L+ A+ +++M E + + D V +
Sbjct: 164 EARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIH 223
Query: 356 HTMFFGLMKSSGLEGVCKLYD----------------------------------RMIEG 381
+ + L S LE +D +M E
Sbjct: 224 NLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSER 283
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ P T L+ F R+D L ++RGF P ++ GLC GR EE
Sbjct: 284 RCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEG 343
Query: 442 FECSKQMLVRRRQVSEASYRML 463
E +M R + +Y L
Sbjct: 344 CERFHEMRNRGYEPDAVTYAAL 365
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 92/196 (46%), Gaps = 3/196 (1%)
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
++G CK G AM L +EM C P + T +I+G + + +A + + +
Sbjct: 16 LNGLCKTGQLDRAMLLLDEM---PCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGC 72
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
+PD YN I L + ++ A +L+ +M+EK+ VTY + GL+K+ L+
Sbjct: 73 EPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMA 132
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
+ ++M+E P +T +++ RV+ ++ ++ G P L++GL
Sbjct: 133 ILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLA 192
Query: 434 SRGRWEEAFECSKQML 449
G+ +EA QM+
Sbjct: 193 KIGKLDEALVYLNQMV 208
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/244 (22%), Positives = 101/244 (41%), Gaps = 9/244 (3%)
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++ R + + LL G ++G + + EM P +V + + I+G C++
Sbjct: 1 MIDRKLVDTRVCTALLNGLCKTGQLDRAMLLLDEMPCS---PDMVAFTVVINGLCREKRL 57
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + E R C P T I G + A QL +M ++ P Y A+
Sbjct: 58 DEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL 117
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ L++ L+ AM ++++M EK TY + GL K+ +E +++ M+
Sbjct: 118 VDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGC 177
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD-----LLVTGLCSRGRW 438
P L+ ++D L +++ G C G D L++ LC+ G
Sbjct: 178 RPDAFVYTALISGLAKIGKLDEALVYLNQMVENG-CARGVEPDVVIHNLVIRQLCASGNL 236
Query: 439 EEAF 442
E+A
Sbjct: 237 EDAL 240
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 77/197 (39%), Gaps = 38/197 (19%)
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
L + T L++G + +A L DEMP PD+ A+ +I+ L R + L+ A
Sbjct: 6 LVDTRVCTALLNGLCKTGQLDRAMLLLDEMP---CSPDMVAFTVVINGLCREKRLDEAFS 62
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+++ D VTY+ GL K+ ++ +L +M E K +P T T L
Sbjct: 63 VLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTAL----- 117
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
V GL GR +EA +QM+ + +
Sbjct: 118 ------------------------------VDGLLKAGRLDEAMAILEQMVEKGNSPTLK 147
Query: 459 SYRMLQRYLVQANANEK 475
+Y ++ L +A E+
Sbjct: 148 TYTVVIDGLSKAGRVEE 164
>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 1163
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/324 (25%), Positives = 151/324 (46%), Gaps = 12/324 (3%)
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTA 230
G K FN L++++ +E+ VF + S +P+ T N LLL + G
Sbjct: 150 GTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNM 209
Query: 231 MEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ + EM+ G P T+NI I G+CK + R F+EM R C P L T TL+
Sbjct: 210 AQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLV 269
Query: 290 HGAGLVRNIHQARQLFDEMPKR--NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
G ++ A + + M K+ NL PD+ Y ++ +++ A+ + +EM K
Sbjct: 270 DGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKG 329
Query: 348 IGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ + +TY+T+ GL + ++ + ++++ + G F+P T T+ LM C ++
Sbjct: 330 LKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDA 389
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSKQMLVRRRQVSE--AS 459
L ++ ++ P +L+ LC RG +E A + K++L+R + A+
Sbjct: 390 LEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAA 449
Query: 460 YRMLQRYLVQANANEKLEDLDRMI 483
Y+ + +L + K E + R +
Sbjct: 450 YKSMFEFLCRNGKTAKAERVFRQL 473
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 74/350 (21%), Positives = 150/350 (42%), Gaps = 28/350 (8%)
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ LE F++M + + +R S ++VL++ C + + A +F +L + +
Sbjct: 388 DALEVFEKM---MVLNVRP-DSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGC 443
Query: 216 NILLLGFKE-------SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
L+ +K +G E + +++ RG + + ++ I I G+C++G F
Sbjct: 444 TPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQDPL-SFKILIKGHCREGTFEAGYE 502
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L M R +P L+T +LI G A Q ++M K + P+ ++++++ L+
Sbjct: 503 LLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLL 562
Query: 329 RCRDLNAAMELMDEMEEKRIGHD-NVTYHTMFFGLMKSSGL-EGVCKLYDRMIEGKFVPK 386
+ + + M E +I + N++ HT+ L+ SGL + K+ + +V
Sbjct: 563 AKGCAHESARFIMLMLEGKIRQNINLSTHTV--RLLFGSGLRDKAFKIVGLLYANGYVVD 620
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
L+ F N + L L + +++ D ++ GLC R EAF
Sbjct: 621 MEE---LIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYY 677
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPTRQ 496
+++ + + R L+ V A +LE++ + K + P RQ
Sbjct: 678 ELV---EKGNNQPLRCLENLRVALEARGRLEEVKFLSKRM-----PNKRQ 719
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 8/169 (4%)
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
TT+ L++ +A Q F+ P+ + +Y M+ L R R+LN A + +
Sbjct: 87 TTVFEVLRLIKTPSKALQFFNWAPELGFTHNDQSYFLMLEILGRARNLNVARNFLFSI-- 144
Query: 346 KRIGHDNVTYHTMFFG-LMKSSGLEGV----CKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
KR + V FF L++S G G+ ++++ M P T L+
Sbjct: 145 KRRSNGTVKLEDRFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKR 204
Query: 401 FRVDLGLNLWGYLIDR-GFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
R ++ +++ ++ G P + ++L+ G C +E F K+M
Sbjct: 205 GRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEM 253
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 69/154 (44%), Gaps = 7/154 (4%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGS----EEFNVLLQAFCTQKEMK 195
+ S+++ + + ++E + FD + E+EI +R G + + + C +
Sbjct: 407 TYSVLIRNLCQRGNFERAEQLFDELSEKEIL--LRDDGCTPLVAAYKSMFEFLCRNGKTA 464
Query: 196 EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
+A VF +L+ R + + IL+ G G A M+ R F P + TY ID
Sbjct: 465 KAERVFRQLMKRGTQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLID 524
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
G +KG A + E+M + + +P T +++
Sbjct: 525 GLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSIL 558
>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 590
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 139/312 (44%), Gaps = 5/312 (1%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L++ F K++++A V L P+ N ++ GF ++ V M RGF
Sbjct: 118 LIKGFFNMKKIEKAIQVMEILEKHGKPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGF 177
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P VVTYNI I +C +G A+R+ +++ + C P++ T T LI I +A +
Sbjct: 178 EPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK 237
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L DEM R L+PD YN +++ + + L+ A E + + + TY+ + L+
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
E KL M+ P T L+ C + ++D N+ + ++ P G+
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRM 482
+ D L++ LC G+ + A E M+ SY + L + NA+E L +
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEAL----NI 413
Query: 483 IKNLQAVLPPPT 494
+ L V PP
Sbjct: 414 FEKLGEVGCPPN 425
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/315 (22%), Positives = 133/315 (42%), Gaps = 10/315 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-----KTMNILLLGFKESGDVTAMEMFY 235
+NV++ C + + A + LSR + N T NILL G E
Sbjct: 254 YNVVVNGMCKEGMLDRA----FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLM 309
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M+++G P+ +TY+ I C+ G +A + + M+ A P + LI
Sbjct: 310 SDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCRE 369
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ A + D+M PDI +YN++++SL + + + A+ + +++ E + +Y
Sbjct: 370 GKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSY 429
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+F L S + M+ P T L+ C + VD + L + +
Sbjct: 430 NTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
C P + + ++ GLC R +A E M+ +E +Y +L + + A
Sbjct: 490 SEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRY 549
Query: 475 KLEDLDRMIKNLQAV 489
+L ++ N+ A+
Sbjct: 550 DAMELANLLVNMDAI 564
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/258 (21%), Positives = 111/258 (43%), Gaps = 2/258 (0%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
F MV RG++P V+ I G+ A+++ E +E+ P + +I G
Sbjct: 99 FLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYNAVISGFC 157
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ A ++ D M KR +PD+ YN +I + L+ A+ +MD++ + +
Sbjct: 158 KADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVI 217
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY + + G++ KL D M+ P T +++ C +D +
Sbjct: 218 TYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRI 277
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G ++L+ L + G+WE + MLV+ + + +Y L L +
Sbjct: 278 SKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKI 337
Query: 474 EKLEDLDRMIKNLQAVLP 491
++ +++ +++K +A+ P
Sbjct: 338 DEAKNVLKVMKE-KALAP 354
>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
At5g59900 [Vitis vinifera]
Length = 900
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 131/276 (47%), Gaps = 1/276 (0%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ N L+ + G + E ++ M +G P+ VTY+I ID +CK+G A+
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+M V ++ ++LI G + + A+ LFDEM LKP++ Y ++IS
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ +L+ A L EM K I + T+ + GL ++ + KL+ M+E +P
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +L++ C L ++++G P + L++GLCS GR EA E +
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591
Query: 449 LVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMI 483
+++++E + +L Y + ++ L+ M+
Sbjct: 592 QGEQQKLNEMCFSALLHGYCKEGRLDDALDACREML 627
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 136/308 (44%), Gaps = 10/308 (3%)
Query: 161 AFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
AFD + + ++KFG +N L+ + C ++ EA S+F + + PN+ T
Sbjct: 339 AFDLVNK-----VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+IL+ F + G + F +M G + +V Y+ I G+CK G A LF+EM
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T+LI G +H A +L+ EM + + P+ + A+IS L +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE 513
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L EM E + + VTY+ + G K +L D M+E VP T T L+
Sbjct: 514 ANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLIS 573
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C RV L + L+ G C GR ++A + ++ML R +
Sbjct: 574 GLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAM 633
Query: 456 SEASYRML 463
Y +L
Sbjct: 634 DLVCYSVL 641
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 13/389 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P L+ L R+R F A L + + P + ++ L + F E
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMN 216
+ + ++ V +NV ++ C + + EA + LLS + T
Sbjct: 238 IGRMESSGCDLSVAT-------YNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYC 289
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+LG + + A E +EM+ GF PS + +DG KKG G A L ++++
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
PSL LI+ + +A LF+ M + L P+ Y+ +I S + L+ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ + +M E I Y ++ G K L L+D MI P L+
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C + L+ + +G P+ + L++GLC R EA + +M+ +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 457 EASYRML-QRYLVQANANEKLEDLDRMIK 484
E +Y +L + + + N E LD M++
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVE 558
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 126/284 (44%), Gaps = 2/284 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+ LL +C + + +A ++L R A + ++L+ G D ++ +M
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G RP V Y ID K G A L++ M CLP++ T T LI+G + +
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM N P+ Y + L ++ A++L D + E + + VTY+ +
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA-NTVTYNILI 781
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ ++ MI+ P + ++ +C + + LW +++RG
Sbjct: 782 RGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVN 841
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P A + L+ G C G +AFE M+ R + + A+Y L
Sbjct: 842 PDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 63/296 (21%), Positives = 125/296 (42%), Gaps = 1/296 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C + E+ A ++ ++ + +PN T L+ G + + + EMV
Sbjct: 463 YTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMV 522
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+ VTYN+ I+G+CK+G A L +EM +P T LI G +
Sbjct: 523 EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVS 582
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+AR+ +++ K + ++A++ + L+ A++ EM + + D V Y +
Sbjct: 583 EAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI 642
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
+G+++ + L +M + P ++ + + LW ++ G
Sbjct: 643 YGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCL 702
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
P+ L+ GLC G ++A ++ML ++ +Y YL EK
Sbjct: 703 PNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEK 758
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/413 (21%), Positives = 166/413 (40%), Gaps = 25/413 (6%)
Query: 58 LPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ------HPHFTPTPDAFEKTLH 111
LPQ LS L NGL + F+ L P + +
Sbjct: 177 LPQIRTLSGVL-------------NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVR 223
Query: 112 ILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
L ++ F +A E++ ++ + L ++ + ++ + + K Q E +E + + +
Sbjct: 224 SLCELKDFIRAREVIGRMESSGCDL-SVATYNVFIRGLCKNQRVWEAVEIKNLLS---YK 279
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTA 230
G+R + L+ C +E + + +++ F P+ ++ L+ G ++ G++ +
Sbjct: 280 GLRA-DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+++ G PS+ YN I+ CK G +A LF M P+ T + LI
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ A +M + +K + Y+++IS + L AA L DEM +
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ V Y ++ G K L +LY M P T T L+ C R+ L+
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G +++ P+ ++L+ G C G AFE +M+ + +YR L
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPL 571
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 116/306 (37%), Gaps = 39/306 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
F L+ C M EA +F +++ PN T N+L+ G KE V A E+ EM
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL-DEM 556
Query: 239 VLRGFRPSVVTYNIRIDG-----------------------------------YCKKGCF 263
V +G P TY I G YCK+G
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRL 616
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+ EM L + LI+G ++ L +M + L+PD Y M
Sbjct: 617 DDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTM 676
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + + +L A L D M + + VTY + GL K ++ L M+
Sbjct: 677 IDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNS 736
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+P T + + ++ + L L++ GF + ++L+ G C GR +EA E
Sbjct: 737 LPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAE 795
Query: 444 CSKQML 449
M+
Sbjct: 796 VLVNMI 801
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+ L+ C M +A + ++L S PN T L G++ A+++ H++
Sbjct: 708 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL--HDV 765
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+L GF + VTYNI I G+CK G +A + M P + +T+I+ ++
Sbjct: 766 LLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDL 825
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +L++ M R + PD AYN +I +L A EL D+M + + + TY+++
Sbjct: 826 KEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 885
Query: 359 FFG--LMKS 365
G LM S
Sbjct: 886 IHGTCLMSS 894
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 94/224 (41%), Gaps = 1/224 (0%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
P+N ++ ++G++ + MV G P+VVTY I+G CK G A L
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELL 727
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
EM LP+ T + NI +A QL D + + L + YN +I +
Sbjct: 728 CREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGFCK 786
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ A E++ M + I D ++Y T+ + + L+ KL++ M+ P T
Sbjct: 787 LGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVA 846
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L+ CV + L ++ RG P+ + L+ G C
Sbjct: 847 YNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTC 890
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
D + + M LP ++T++ +++G +R A LFDE+ L+PD+ Y A++
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
SL +D A E++ ME TY+ GL K+ + ++ + +
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T L+ C + G + +I+ GF P A+ LV GL +G AF+
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 90/199 (45%), Gaps = 7/199 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P + ++ L ++ D+A EL+ SL + + L ++ + E+ ++
Sbjct: 703 PNVVTYTALINGLCKIGLMDKA-ELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ 761
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILL 219
D + E F+ + +N+L++ FC ++EA V V ++ S +P+ + + ++
Sbjct: 762 LHDVL-LEGFLA----NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 816
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
+ GD+ + M+ RG P V YN I G C G A L ++M R
Sbjct: 817 YEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVK 876
Query: 280 PSLQTITTLIHGAGLVRNI 298
P+ T +LIHG L+ ++
Sbjct: 877 PNRATYNSLIHGTCLMSSV 895
>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1043
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 148/318 (46%), Gaps = 10/318 (3%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K ++SR S +E T+E DR +G + G +N L+ AF + EA
Sbjct: 491 KGGECIISRDSN-AGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEA-- 547
Query: 200 VFVKLLS-----RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
VKLL P T L+ G ++G + EM +G PSVVTY+ +
Sbjct: 548 --VKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLM 605
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
+ K+ +++ LF+EM R C+ + T + +I+ ++ QA +F M + ++
Sbjct: 606 ASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P +G Y ++SSL++ ++ A+++ +E++E + D Y+ M GL+KS+ ++ CKL
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
D M +P T L+ + R++ N++ + + G P A L+ L
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785
Query: 435 RGRWEEAFECSKQMLVRR 452
G+ A + M +R
Sbjct: 786 GGKLSHALIIFRAMAKKR 803
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 148/350 (42%), Gaps = 19/350 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMS 143
AL+ F LQ P + ++ L + D+A +L+ + Q P L T S+
Sbjct: 687 ALQIFN-ELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSL- 744
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARS 199
L + K EE F +M E G E + L+ ++ A
Sbjct: 745 --LDGLGKSGRLEEAFNMFTKMTEE--------GHEPDVVAYTSLMDVLGKGGKLSHALI 794
Query: 200 VFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F + R P+ T + L+ + G V F+ + +G P+V Y+ ID +
Sbjct: 795 IFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFG 854
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KKG A+ LFEEM+R C P++ T L+ G ++ A +L +EM K PD+
Sbjct: 855 KKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLV 914
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
YN +I + + ++ A M+EK I D +T+ ++ L K L C+L+D M
Sbjct: 915 TYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSM 974
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
E + P T +L+ +V ++ + +G P G + ++
Sbjct: 975 EEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIM 1024
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 146/334 (43%), Gaps = 14/334 (4%)
Query: 89 FFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSR 148
FF + Q ++ T + + LA + D ++++ + + + SM ++ S
Sbjct: 168 FFTWAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRI----SMHLLTSL 223
Query: 149 ISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ F S A EIF ++ FG + +N +L+ A VF KL
Sbjct: 224 LRTFGSTNNVSGAL-----EIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKL 278
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
R P+ +T I + F SG + EM+ G P V T+ + ID K G
Sbjct: 279 GQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNI 338
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + F M+ + C P++ T TTL++G + +A ++F EM + N PD AYN +
Sbjct: 339 DEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTL 398
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + + + A L EM+++ + + TY+ M L K+ +L+ + E
Sbjct: 399 IDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGA 458
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
VP T L+ ++D L + ++++G
Sbjct: 459 VPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKG 492
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 169/384 (44%), Gaps = 17/384 (4%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L F + + +A++ + +H PT + + L + D+A L+ ++
Sbjct: 532 NTLMSAFIHNGHVDEAVKLLEVMKKH-ECIPTVVTYTTLVDGLGKAGRLDEAVSLLREME 590
Query: 131 R--THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
+ PS++T S+ ++ K EE+L FD M R+ V +++++
Sbjct: 591 KQGCEPSVVTYSSL---MASFYKRDQEEESLSLFDEMVRKGCVA----DVSTYSLVINCL 643
Query: 189 CTQKEMKEARSVFVKL----LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
C ++ +A VF ++ + N KT+ L+ K+ A+++F +E+
Sbjct: 644 CKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLV--KDEKIDFALQIF-NELQESSLV 700
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P YNI ++G K +A +L + M+ LP L T T+L+ G G + +A +
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNM 760
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
F +M + +PD+ AY +++ L + L+ A+ + M +KR D VTY ++ L K
Sbjct: 761 FTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGK 820
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+E ++ I P L+ F VD L L+ + R P+
Sbjct: 821 EGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVT 880
Query: 425 LDLLVTGLCSRGRWEEAFECSKQM 448
+ L++GL GR A + ++M
Sbjct: 881 YNNLLSGLAKAGRLNVAEKLLEEM 904
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/373 (22%), Positives = 148/373 (39%), Gaps = 29/373 (7%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
K LE KF L +P +K LH+ + + SH T+ + ++
Sbjct: 138 KQLERLKFKL-NPGLVCDVVVNQKDLHLAKCFFTWAGQQDGYSH---------TVGTYTL 187
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
M+ R++ Q + ++ M +E + LL+ F + + A +F ++
Sbjct: 188 MIKRLAGAQETDAVVQILTAMWKEG----HRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243
Query: 205 LS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-----LRGFR--PSVVTYNIRIDG 256
S P+ N +L + G FYH V L FR P T+ I +
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGG-------FYHSAVIVFGKLGQFRIQPDAQTFRIFVHS 296
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ + G A +EM + P + T T LI NI +A + F+ M P+
Sbjct: 297 FNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPN 356
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ Y +++ L + L A E+ EM+E D + Y+T+ GL K+ + C L+
Sbjct: 357 VVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFK 416
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M + VP RT +++ R L+ L ++G P + L+ L G
Sbjct: 417 EMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGG 476
Query: 437 RWEEAFECSKQML 449
+ ++ K+M+
Sbjct: 477 QMDKVLAIIKEMV 489
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/374 (20%), Positives = 161/374 (43%), Gaps = 18/374 (4%)
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
+ D+A +L+ V + H + T+ + + ++ + K +E + ME++ G
Sbjct: 543 HVDEAVKLL-EVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQ--------G 593
Query: 178 SE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAME 232
E ++ L+ +F + + +E+ S+F +++ + + T ++++ +S DV
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ M G P + Y + K A+++F E++ + +P +++G
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A +L D M +N+ PD+ Y +++ L + L A + +M E+ D
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
V Y ++ L K L ++ M + + VP T L+ RV+ +
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA-- 470
I +G P+ L+ +G + A E ++M R+ + +Y L L +A
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893
Query: 471 -NANEK-LEDLDRM 482
N EK LE+++++
Sbjct: 894 LNVAEKLLEEMEKV 907
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 94/435 (21%), Positives = 179/435 (41%), Gaps = 49/435 (11%)
Query: 98 HFTPTPDA--FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQ 153
F PDA F +H R D A E + + ++ P + T ++++ + K
Sbjct: 280 QFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTF---TVLIDALVKSG 336
Query: 154 SYEETLEAFDRMEREIFVGIR-KFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPN 211
+ +E + F+ M+ +R + L+ ++EA VFV++ + +P+
Sbjct: 337 NIDEACKFFNGMKN-----LRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPD 391
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
N L+ G ++G+ + EM RG P++ TYNI I K G +A +LF
Sbjct: 392 AIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFH 451
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK----------------- 314
+++ +P + T TLI G + + + EM ++ +
Sbjct: 452 DLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEG 511
Query: 315 -------PDIG-------AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
P +G YN ++S+ I ++ A++L++ M++ VTY T+
Sbjct: 512 ADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVD 571
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K+ L+ L M + P T LM F + + L+L+ ++ +G
Sbjct: 572 GLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVA 631
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
L++ LC ++A + +M + +Y+ L LV+ +EK++
Sbjct: 632 DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVK---DEKIDFAL 688
Query: 481 RMIKNLQ-AVLPPPT 494
++ LQ + L P T
Sbjct: 689 QIFNELQESSLVPDT 703
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/210 (21%), Positives = 86/210 (40%), Gaps = 8/210 (3%)
Query: 266 AMRLFEEMERVACLPSLQ----TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A+ +F +M+ C PS + L+ G H A +F ++ + ++PD +
Sbjct: 236 ALEIFNQMKSFGCNPSTNMYNFVLELLVKGG----FYHSAVIVFGKLGQFRIQPDAQTFR 291
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+ S R L+ A E + EM + I T+ + L+KS ++ CK ++ M
Sbjct: 292 IFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNL 351
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ P T L+ R++ ++ + + P A + L+ GL G + A
Sbjct: 352 RCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMA 411
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
K+M R + +Y ++ L +A
Sbjct: 412 CGLFKEMKDRGLVPNLRTYNIMISVLGKAG 441
>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At3g04760, chloroplastic; Flags: Precursor
gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 602
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ F T + + +A V +++L +F P+ N L+ GF + + M +
Sbjct: 130 LIKGFFTLRNIPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VTYNI I C +G A+++ ++ C P++ T T LI L + +A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L DEM R LKPD+ YN +I + + ++ A E++ +E K D ++Y+ + L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRAL 308
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ E KL +M K P T +L+ C + +++ +NL + ++G P
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
++ D L+ C GR + A E + M+
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 4/275 (1%)
Query: 173 IRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ KFG + +N L+ FC + +A V ++ S+ F+P+ T NI++ G +
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
++++ +P+V+TY I I+ +G +A++L +EM P + T T+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G + +A ++ + + +PD+ +YN ++ +L+ +LM +M ++
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VTY + L + +E L M E P + L+ FC R+D+ +
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+I G P + ++ LC G+ ++A E
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G + +++ L E M R P + T LI G +RNI +A ++ + + K +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+I+ + ++ A ++D M K D VTY+ M L L+ K+ ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ P T +L++ + VD L L ++ RG P + ++ G+C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ AFE + + ++ + SY +L R L+ E+ E L
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKL 320
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + + A + L L P+ + NILL G E +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRL------------------------------ 269
P+VVTY+I I C+ G +AM L
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 270 -----FEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNA 322
E M CLP + T++ A L +N QA ++F ++ + P+ +YN
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVL--ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M S+L D A+ ++ EM I D +TY++M L + ++ +L M +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T +++ FC R++ +N+ ++ G P+ +L+ G+ G EA
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 443 ECSKQMLVRRRQVSEASYRMLQR 465
E + LVR +SE S++ L R
Sbjct: 564 ELAND-LVRIDAISEYSFKRLHR 585
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG+ MV +G+ P V+ I G+ A+R+ E +E+ P +
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI+G + I A ++ D M ++ PD YN MI SL L+ A+++++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+TY + M G++ KL D M+ P T +++ C VD
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ L +G P + ++L+ L ++G+WEE + +M + + +Y +L
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 465 RYLVQANANEKLEDLDRMIK 484
L + E+ +L +++K
Sbjct: 341 TTLCRDGKIEEAMNLLKLMK 360
>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
Length = 814
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 93/390 (23%), Positives = 164/390 (42%), Gaps = 11/390 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA + FK +Q P + +H L + R D+A + + +R P+ T ++
Sbjct: 237 KACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ S ++E + F M R + ++L+ + C ++KEAR VF
Sbjct: 296 ---IYGYSSTGQWKEAVRVFKEMRRHSILP----DVVTLSMLMGSLCKYGKIKEARDVFD 348
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + P+ + NI+L G+ G + M + M+ G P T+N+ I Y G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
AM +F EM P + T T+I + + A + F++M + + PD AYN
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L A EL+ E+ + D V + ++ L K + ++D +
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 528
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P MLM +C+ +++ L ++ ++ G P+ LV G C GR +E
Sbjct: 529 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++ML R + S Y ++ L QA
Sbjct: 589 LSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 15/313 (4%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIFVGIRKFGSEEFNVLL 185
R H L + ++S+++ + K+ +E + FD M ++F +N++L
Sbjct: 316 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF---------SYNIML 366
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+ T+ + + +F +L AP+ T N+L+ + G + + ++EM G +
Sbjct: 367 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 426
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VVTY I C+ G DAM F +M P LI G ++ +A++L
Sbjct: 427 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 486
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
E+ + DI ++++I++L + + A + D + D V Y + G
Sbjct: 487 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 546
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+E +++D M+ P L+ +C R+D GL+L+ ++ RG P
Sbjct: 547 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 606
Query: 425 LDLLVTGLCSRGR 437
+++ GL GR
Sbjct: 607 YSIIIDGLFQAGR 619
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/287 (24%), Positives = 125/287 (43%), Gaps = 3/287 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFA---PNNKTMNILLLGFKESGDVTAMEMFYH 236
+++LL++ C Q + +A + + A PN N ++ GF + GDV +
Sbjct: 184 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 243
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV RG P +VTYN + CK A +M LP+ T LI+G
Sbjct: 244 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 303
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+A ++F EM + ++ PD+ + ++ SL + + A ++ D M K D +Y+
Sbjct: 304 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 363
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
M G L + L+D M+ P T +L+K + +D + ++ + D
Sbjct: 364 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 423
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G P ++ LC G+ ++A E QM+ + + +Y L
Sbjct: 424 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 184 LLQAFCTQKEMKE-ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVL 240
+L CT+ E A + F +LL + N N LL GF E+ A+++ H
Sbjct: 116 ILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE 175
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNI 298
G P V +Y+I + C +G G A L M C P++ T+I G ++
Sbjct: 176 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 235
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
++A LF EM +R + PD+ YN+++ +L + R ++ A + +M KR+ +N TY+ +
Sbjct: 236 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+G + + +++ M +P T+ MLM C ++ +++ + +G
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355
Query: 419 CPHGHALDLLVTGLCSRG 436
P + ++++ G ++G
Sbjct: 356 NPDVFSYNIMLNGYATKG 373
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/394 (22%), Positives = 163/394 (41%), Gaps = 57/394 (14%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSYE 156
PD F + A D+A + + + R H P ++T +++ L RI K +
Sbjct: 391 APDFYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKM---D 446
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMN 216
+ +E F++M + V K+ +N L+Q FCT + +A+ +L+S N ++
Sbjct: 447 DAMEKFNQMIDQ-GVAPDKYA---YNCLIQGFCTHGSLLKAK----ELISEIMNNGMHLD 498
Query: 217 ILLLG-----FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
I+ + G V + + V G P V Y++ +DGYC G A+R+F+
Sbjct: 499 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 558
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M P++ TL++G + I + LF EM +R +KP Y+ +I L +
Sbjct: 559 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 618
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
A EM E I D TY+ + GL K+ + +D I
Sbjct: 619 RTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKN-------RCFDEAI-----------F 660
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ + +N ++++ L+ ++ G+ R EEA + +
Sbjct: 661 LFKELRAMNVKINI-----------------ITLNTMIDGMFQTRRVEEAKDLFASISRS 703
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
R S +Y ++ L++ E+ ED+ ++N
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 737
>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
Length = 500
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 110/438 (25%), Positives = 194/438 (44%), Gaps = 53/438 (12%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
E KF + + TP+ T+ I L + D+A L+S + ++ P+ +T S+
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL-- 121
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
IS E EA+D +E ++ G I + + L+ FC K+ +A VF +
Sbjct: 122 ----ISGLCKAERASEAYDLLEEMVYSGCIPDIFT--YTTLITGFCKSKKSDDALRVFEQ 175
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKG 261
L++R F P+ T + L+ G + G + + M+ G P+ VTYN I G+C+ G
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+AM L E M P + T TTL++G + + A L ++M ++ L PD+ +
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE------------ 369
+++ L R L+ A+ ++ EM K TY+T+ G +++ LE
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC 355
Query: 370 ------------GVCKLYDRMIEGKFVPKTR------TVVM---LMKFFCVNFRVDLGLN 408
G+CK+ + V + R VVM ++ C +VD
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415
Query: 409 LWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ +++ C P+ LVTGLC+ G + A + + + + +Y +L
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAF 471
Query: 468 VQANANEKL-EDLDRMIK 484
+AN +E E LD M++
Sbjct: 472 RKANRDEDARELLDDMVQ 489
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 5/282 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ A C + + EAR ++ +R PN T +L+ G + G V +M
Sbjct: 49 YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ VTYN I G CK +A L EEM C+P + T TTLI G +
Sbjct: 109 KKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYHTM 358
A ++F+++ R +PD+ Y+ +I L + L A++L M + + VTY+++
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + ++ L +RM E P T LM FC R+D +L + +G
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
P L+ GLC R +A +M RR+ S Y
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEM--RRKSCSPTVY 327
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTY I G CK A+ +M P + T T +IH + +H+AR+ +E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M RNL P++ Y +I L + ++ A+ L+ +M +K + VTY+++ GL K+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L + M+ +P T L+ FC + + D L ++ L+ RGF P
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 428 LVTGLCSRGRWEEAFECSKQML 449
L+ GLC GR +EA + +M+
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMI 212
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+F +MV +GF P V TY I C + +A + EEM P++ T T LI G
Sbjct: 32 IFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGL 91
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A L +M K+ + P YN++IS L + + A +L++EM D
Sbjct: 92 CKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 150
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY T+ G KS + +++++++ F P T L+ C R+ ++L+G
Sbjct: 151 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 210
Query: 413 LIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+I G C P+ + L++G C G+ +EA ++M
Sbjct: 211 MIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 102 TPDAFEKT--LHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+PD T ++ ++ D A++L++ + R P ++T S+ L R ++
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI 217
L R V +N +L +C +++EAR ++ + PN + NI
Sbjct: 313 ILGEMRRKSCSPTV-------YTYNTILDGYCRANQLEEARKFMLEEMD-CPPNVVSFNI 364
Query: 218 LLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ER 275
++ G K + AME+ E R P VV Y IDG C++ +A R++ +M E
Sbjct: 365 MIRGLCKVNRSSEAMELV-EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
CLP+ T +TL+ G + +AR + + P+IG YN +I + +
Sbjct: 424 PGCLPNSITYSTLVTGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDED 479
Query: 336 AMELMDEMEEKRIG 349
A EL+D+M ++ G
Sbjct: 480 ARELLDDMVQRGFG 493
>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 784
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 94/372 (25%), Positives = 163/372 (43%), Gaps = 20/372 (5%)
Query: 121 QAWELMSHVQRTH--PSLLTLKSMSIMLSRI-SKFQSYEETLEAFDRMEREIFVGIRKFG 177
A ++ + ++R H P+LLT ++ L R SK Y + + IF + K G
Sbjct: 157 HAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVY---------LSKAIFSDVIKLG 207
Query: 178 ----SEEFNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAM 231
+ FN+L+ C + ++ EA + K+ S F P+N + N +L + G +
Sbjct: 208 VKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCF-PDNVSYNTILDVLCKKGKLNEA 266
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
+M G P+ T+NI + GYCK G +A ++ + M + LP + T LI G
Sbjct: 267 RDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGG 326
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
I +A +L DEM L PD+ YN +I+ C EL+D+ME K + +
Sbjct: 327 LCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPN 386
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
VTY+ + +K ++ +M E F P T L+ +C R+ +
Sbjct: 387 AVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMD 446
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQA 470
+ +G + L+ ++ LC + ++A++ R V E SY ++ Y
Sbjct: 447 EMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDG 506
Query: 471 NANEKLEDLDRM 482
+ E ++ D M
Sbjct: 507 KSVEAMKLWDEM 518
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 86/381 (22%), Positives = 174/381 (45%), Gaps = 12/381 (3%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
PD + + I L + D+A+ L ++ P ++T ++ ++ S +
Sbjct: 315 PDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTL---INGCFDCSSSLKG 371
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
E D+ME + G++ + +NV+++ + + +M A + K+ S F+P+ T N
Sbjct: 372 FELIDKMEGK---GVKP-NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNT 427
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ ++G ++ EM +G + + VT N + C + DA +L +
Sbjct: 428 LINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRG 487
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ TLI G +A +L+DEM ++ + P I YN MI L + ++
Sbjct: 488 YFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSI 547
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ ++E+ E + D TY+T+ G + +E + +++M++ F P T +L++
Sbjct: 548 DKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGL 607
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C +D L L+ I +G + +++GLC R+EEAF+ +M ++
Sbjct: 608 CTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDC 667
Query: 458 ASYRMLQRYLVQANANEKLED 478
+Y + L A ++ E+
Sbjct: 668 YTYNAILSALADAGRMKEAEE 688
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 165/358 (46%), Gaps = 12/358 (3%)
Query: 99 FTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F+ PD ++ L +L + ++A +L+ + + + L + +I++S K +
Sbjct: 241 FSCFPDNVSYNTILDVLCKKGKLNEARDLLLDM-KNNGLLPNRNTFNILVSGYCKLGWLK 299
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKT 214
E + D M + + + +N+L+ C ++ EA + ++ + + P+ T
Sbjct: 300 EAAQVIDLMAQNNVLPDVW-----TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVT 354
Query: 215 MNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
N L+ G F S + E+ +M +G +P+ VTYN+ + Y K+G +A +M
Sbjct: 355 YNTLINGCFDCSSSLKGFELI-DKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKM 413
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E P T TLI+G + +A ++ DEM ++ LK + N ++ +L R L
Sbjct: 414 EESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKL 473
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
+ A +L+ ++ D V+Y T+ G K KL+D M E + +P T +
Sbjct: 474 DDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTM 533
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ C + + D ++ L++ G P + ++ G C G+ E+AF+ +M+ +
Sbjct: 534 IGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKK 591
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 113/266 (42%), Gaps = 40/266 (15%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
EAF M+ G+ K S N +L C ++++ +A + R + + + L
Sbjct: 440 EAFRMMDEMSRKGL-KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498
Query: 219 LLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++G FK+ V AM++ + EM + PS++TYN I G C G ++ E+
Sbjct: 499 IMGYFKDGKSVEAMKL-WDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESG 557
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI-------------------- 317
+P T T+I G + +A Q ++M K++ KPD+
Sbjct: 558 LVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKAL 617
Query: 318 ---------------GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
YN +IS L + A +L+ EMEEK++G D TY+ + L
Sbjct: 618 KLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSAL 677
Query: 363 MKSSGLEGVCKLYDRMIE-GKFVPKT 387
+ ++ + R++E GK +T
Sbjct: 678 ADAGRMKEAEEFMSRIVEQGKLQDQT 703
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 81/207 (39%), Gaps = 39/207 (18%)
Query: 281 SLQTITTLIHGAGLVRN-IHQARQLFDEMPKRNLKPDIGAYNAMISSLIR---------- 329
SL+ I GA + N H A Q+F+ M + +LKP++ N +I++L+R
Sbjct: 137 SLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLS 196
Query: 330 -------------------------C---RDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
C L+ A+ L+ +M++ DNV+Y+T+
Sbjct: 197 KAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDV 256
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L K L L M +P T +L+ +C + + + P
Sbjct: 257 LCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPD 316
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQM 448
++L+ GLC G+ +EAF +M
Sbjct: 317 VWTYNMLIGGLCKDGKIDEAFRLKDEM 343
>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 763
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 152/353 (43%), Gaps = 16/353 (4%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ F I L + D A ++ + Q P ++T + L + SKFQ E
Sbjct: 249 PNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVY 308
Query: 159 LEAF--DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTM 215
L + +E + F +N L+ +C ++ A + V + + F P+ T
Sbjct: 309 LGKLVNEGLEPDSFT---------YNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTY 359
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G G+ ++E + +G +P+V+ YN I G +G +A +L EM
Sbjct: 360 RSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSE 419
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P +QT L++G + + A L M + PDI +N +I +
Sbjct: 420 KGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMEN 479
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A+E++D M + + D TY+++ GL K+S E V + Y M+E P T +L++
Sbjct: 480 ALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLE 539
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C ++D L L + ++ P L+ G C G + A+ ++M
Sbjct: 540 SLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 126/265 (47%), Gaps = 2/265 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ Q + EA + ++ + P +T NIL+ G + G V+ + M+
Sbjct: 394 YNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G+ P + T+NI I GY + +A+ + + M P + T +L++G
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYE 513
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + M ++ P++ +N ++ SL R L+ A+ L++EM+ K + D VT+ T+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVP-KTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K+ L+G L+ +M E V T T +++ F V + L+ ++DR
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFE 443
P G+ L+V G C G + ++
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVDLGYK 658
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 147/332 (44%), Gaps = 8/332 (2%)
Query: 120 DQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR-MEREIFVGIRKFGS 178
D+ +EL + + SL L + + +L + K +E + D+ ++R + + +
Sbjct: 198 DEGYELFGKMLASGVSL-CLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTY-- 254
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHE 237
N +Q C + E+ A + +L+ + P+ T N L+ G ++ E++ +
Sbjct: 255 ---NFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
+V G P TYN I GYCK G A R+ +P T +LI G
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
++A LF+E + +KP++ YN +I L + A +L EM EK + + T++
Sbjct: 372 TNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNI 431
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K + L MI + P T +L+ + +++ L + ++D G
Sbjct: 432 LVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNG 491
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + + L+ GLC ++E+ E K M+
Sbjct: 492 VDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV 523
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/350 (24%), Positives = 134/350 (38%), Gaps = 73/350 (20%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ C + E A ++F + L + PN N L+ G G + EM
Sbjct: 359 YRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMS 418
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P V T+NI ++G CK GC DA L + M P + T LIHG +
Sbjct: 419 EKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKME 478
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIR------------------------------ 329
A ++ D M + PD+ YN++++ L +
Sbjct: 479 NALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILL 538
Query: 330 ---CR--DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV------------- 371
CR L+ A+ L++EM+ K + D VT+ T+ G K+ L+G
Sbjct: 539 ESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMV 598
Query: 372 -C----------------------KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
C KL+ M++ P T +++ FC VDLG
Sbjct: 599 SCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYK 658
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+++ GF P L ++ LC R EA +M V++ V EA
Sbjct: 659 FLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM-VQKGLVPEA 707
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 144/365 (39%), Gaps = 15/365 (4%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
+KALE F + F T + + L F+ E++ +++ + +
Sbjct: 21 MKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVYV 80
Query: 144 IMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ + +E + F+RM E +F +N ++ +A
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF---------SYNAIMSILVDSGYFDQAH 131
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
V++++ R P+ + I + F + A + M +G +VV Y + G+
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
++ + LF +M L T L+H ++ + +L D++ KR + P++
Sbjct: 192 YEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN I L + +L+AA+ ++ + ++ D VTY+ + +GL K+S + +
Sbjct: 252 FTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGK 311
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ P + T L+ +C V L + + GF P L+ GLC G
Sbjct: 312 LVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGE 371
Query: 438 WEEAF 442
A
Sbjct: 372 TNRAL 376
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/356 (22%), Positives = 138/356 (38%), Gaps = 55/356 (15%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PT ++ + IL YFDQA ++ + R + S +I + + L
Sbjct: 109 PTVFSYNAIMSILVDSGYFDQAHKVYMRM-RDRGITPDVYSFTIRMKSFCRTSRPHAALR 167
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCT-------QKEMKEARSVFVKLL-SRFAPNN 212
+ M + E NV+ A+CT + E +F K+L S +
Sbjct: 168 LLNNMSSQ---------GCEMNVV--AYCTVVGGFYEENFKDEGYELFGKMLASGVSLCL 216
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N LL + GDV E +++ RG P++ TYN I G C+KG A+R+
Sbjct: 217 STFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRM--- 273
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+L D+ PK PD+ YN +I L +
Sbjct: 274 ----------------------------VGRLIDQGPK----PDVVTYNYLIYGLCKNSK 301
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
A + ++ + + D+ TY+T+ G K ++ ++ + FVP T
Sbjct: 302 FQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRS 361
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ C + L L+ + +G P+ + L+ GL ++G EA + + +M
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEM 417
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 15/248 (6%)
Query: 76 LFAAHSNGLK---ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--Q 130
L +S LK ALE + + P + L+ L + ++ E + +
Sbjct: 467 LIHGYSTQLKMENALEILDVMMDN-GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
P+L T +I+L + ++ ++ L + M+ + + F L+ FC
Sbjct: 526 GCAPNLFTF---NILLESLCRYHKLDKALGLLEEMKNKSV----NPDAVTFGTLIDGFCK 578
Query: 191 QKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++ A ++F K+ + + + T NI++ F E +VT E + EMV R P
Sbjct: 579 NGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY + +DG+CK G + EM +PSL T+ +I+ + +++A + M
Sbjct: 639 TYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 309 PKRNLKPD 316
++ L P+
Sbjct: 699 VQKGLVPE 706
>gi|410109927|gb|AFV61043.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
javanica]
Length = 431
Score = 112 bits (280), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 140/319 (43%), Gaps = 17/319 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L ++RYF W + + +P+ +L +I
Sbjct: 91 AIECYRLTREHKLWVPF-DTCRKVLEHLMKLRYFKLVWGFYEEILECGYPA--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ + +F I K+G +N L+ + + E R
Sbjct: 148 LMHRFCK--------DGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYIRLGXLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+ +G P+ VT+ IDG+CK
Sbjct: 200 KSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M P T TL +G +++QA L DEM + LKPD
Sbjct: 260 NGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEMSMKGLKPDKFT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL+AA E M ++ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEGRSXDAEKMLREML 379
Query: 380 EGKFVPKTRTVVMLMKFFC 398
P T M++ FC
Sbjct: 380 SVGLKPDXGTYTMIINEFC 398
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 118/260 (45%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + P + + TL++G
Sbjct: 129 FYEEILECGYPASLYFFNILMHRFCKDGDIRVAQSVFDAITKWGLRPXVXSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + +L M ++PD+ Y+ +I+ L + ++ EL DEM K + ++V
Sbjct: 189 RLGXLDEGFRLKSAMXASGVQPDVYTYSVLINGLXKESXMDDXNELFDEMLXKGLVPNSV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L C ++ L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQXLXPDFITYNTLXYGLCKKGDLNQAHGLIDEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE K+M+ + + +Y L L Q
Sbjct: 309 SMKGLKPDKFTYTTLIDGCCKEGDLDAAFEHRKRMIQENIXLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 367 -RSXDAEKMLREMLSVGLKP 385
>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
mitochondrial-like [Cucumis sativus]
Length = 917
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/347 (26%), Positives = 153/347 (44%), Gaps = 24/347 (6%)
Query: 68 LVENVLGR-----------LFAAHSN-GLKALEFFKFTLQHPH-FTPTPDAFEKTLHILA 114
L+EN+LG+ + AA+ N GL+ F+ + + TP+ L L
Sbjct: 485 LLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLV 544
Query: 115 RMRYFDQAW-ELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME-REIFVG 172
R D+AW L + + P +T + +++L + + ++ M+ R +F
Sbjct: 545 RKGSLDEAWIALYDMIDKGFP--VTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPD 602
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
F + + C M +A VF +L + F PNN N L+ GF + G +
Sbjct: 603 AVAFAA-----FINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEA 657
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
EM RG P + T N+ I G CK+G A+ F +M R+ P + T TLI G
Sbjct: 658 LKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDG 717
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ A L +M +PD+ YN I R +N A+ +++E+ I +
Sbjct: 718 YCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPN 777
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
VTY+TM + L+ L ++++ FVP T TV +L+ FC
Sbjct: 778 TVTYNTMINAVCNVI-LDHAMILTAKLLKMAFVPNTVTVNVLLSQFC 823
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 115/270 (42%), Gaps = 39/270 (14%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
PNN T N+L+L F G E H M P V +YNI I+ C KG A+
Sbjct: 285 CPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSSYALH 344
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L M C PS+ T T+I N+ AR+ FDE+ L + YN MIS +
Sbjct: 345 LLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIMISGYV 404
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ RD++ A L +EM K I D +T++T+ G + Y + +G
Sbjct: 405 KARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYR----------YGKEEDGN------ 448
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
R+ L++ G L D C D+ V GLC GR++EA + + +
Sbjct: 449 -------------RLLRDLSVSGLLHDSSLC------DVTVAGLCWAGRYDEAMKLLENL 489
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLED 478
L + S ++ ++ A N LE+
Sbjct: 490 LGKGIPPSVVAFNS----IIAAYGNAGLEE 515
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 119/265 (44%), Gaps = 5/265 (1%)
Query: 175 KFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
KFG S + LL + + + EA ++ + F N +LL G+ G V
Sbjct: 526 KFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVN 585
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
E ++EM RG P V + I+G C G DA +F +M R +P+ +LI
Sbjct: 586 MAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLI 645
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G V +++A +L EM KR L PDI N +I L + + A+E +M +
Sbjct: 646 GGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 705
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D VTY+T+ G K+ + G L +M + + P T + + +C +++ + +
Sbjct: 706 PDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMI 765
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCS 434
LI G P+ + ++ +C+
Sbjct: 766 LEELISVGIVPNTVTYNTMINAVCN 790
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 92/425 (21%), Positives = 158/425 (37%), Gaps = 58/425 (13%)
Query: 69 VENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH 128
V + L R F +ALE ++ TP P A +L R W+L
Sbjct: 220 VLDTLMRAFVKSEMHFEALEILS-KMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGD 278
Query: 129 VQRTHP-------SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
V R P +LL L+ +RI ++ + F R E +++ +
Sbjct: 279 VVRKGPCPNNFTFNLLILEFCRKGWTRIG--EALLHVMGKF-RCEPDVY---------SY 326
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+++ A C + + A + ++ P+ T ++ F + G+V ++ E+
Sbjct: 327 NIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIED 386
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G + + YNI I GY K A LFEEM +P T TL+ G
Sbjct: 387 MGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEED 446
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF- 359
+L ++ L D + ++ L + AM+L++ + K I V ++++
Sbjct: 447 GNRLLRDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIA 506
Query: 360 --------------FGLMKSSGL---------------------EGVCKLYDRMIEGKFV 384
+G+M GL E LYD + +G V
Sbjct: 507 AYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPV 566
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
V+L +F + V++ +LW + RG P A + GLC G +A++
Sbjct: 567 TNMAFTVLLDGYFRIG-AVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDV 625
Query: 445 SKQML 449
ML
Sbjct: 626 FSDML 630
>gi|326513116|dbj|BAK06798.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 130/275 (47%), Gaps = 6/275 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +A S+ L RF P+ T N L G+ + D + +M
Sbjct: 166 FNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADGWCRAKDTSRALDLLRQMAE 225
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER-----VACLPSLQTITTLIHGAGLV 295
G P+ TYNI + G+ + G A F +M++ +C P + + TT+IHG G+
Sbjct: 226 SGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAKDESCKPDIVSYTTIIHGLGVA 285
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +AR+LFDEM K P + YNA+I + + ++ A+ + D+M K + VTY
Sbjct: 286 GQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVEDAVTVFDDMVRKDYMPNVVTY 345
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ GL ++ KL +RM P +T +L+++ ++ L L+ +
Sbjct: 346 TVLIRGLCHVGKIDRAMKLMERMKGEGCEPVVQTYNVLIRYSFEEGEIEKALCLFERMSK 405
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
C P+ +++++ + R R E+ ++ ++
Sbjct: 406 GEDCLPNQDTYNIIISAMFVRKRAEDMATAARMVM 440
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/208 (20%), Positives = 86/208 (41%), Gaps = 7/208 (3%)
Query: 266 AMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+RLF + R + L +L+ G R+ +A L + +R PD+ YN +
Sbjct: 146 AVRLFLSLHRSHRVVQDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLA 204
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI----- 379
R +D + A++L+ +M E + TY+ + G ++ ++ + +M
Sbjct: 205 DGWCRAKDTSRALDLLRQMAESGVTPTKTTYNIILKGFFRAGQIQHAWNFFLQMKKRGAK 264
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P + ++ V ++D L+ + G P + L+ +C +G E
Sbjct: 265 DESCKPDIVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCTPSVATYNALIQVICKKGNVE 324
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYL 467
+A M+ + + +Y +L R L
Sbjct: 325 DAVTVFDDMVRKDYMPNVVTYTVLIRGL 352
>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 623
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 111/435 (25%), Positives = 178/435 (40%), Gaps = 20/435 (4%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPS 135
L S+ + AL FF + P+ + +HILA + F +A + ++ + +
Sbjct: 98 LLRCQSDSISALTFFSWVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKD 157
Query: 136 LLTLKSMSIMLSRISKFQSYEETL-----EAFDR--MEREIFVGIRKF-------GSEEF 181
+ + L + +++ + +A+ R M +E F RK
Sbjct: 158 CSFNEDVFQTLLFCCQDCNWDPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVISC 217
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N LL + + V+ K ++R PN+ T NIL F + GDV + F M
Sbjct: 218 NCLLNGLLKLNRIDQCWQVY-KEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERME 276
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
GF P +VTYN I YC+KG DA L+ M R LP L + T L++G +
Sbjct: 277 EEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKVR 336
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A QLF M R L PDI ++N +I + + + L+ EM I D VT +
Sbjct: 337 EAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVLI 396
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K + + L + T LM C R +L + RG+
Sbjct: 397 EGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYV 456
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + L+ LC +A +M R + S +Y+ L L + + + + E L
Sbjct: 457 PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESL 516
Query: 480 DRMIKNLQA-VLPPP 493
M + LQ+ +LP P
Sbjct: 517 --MEEMLQSGMLPDP 529
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/337 (21%), Positives = 131/337 (38%), Gaps = 45/337 (13%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEE 157
P+ + L+ L ++ DQ W++ + R HP+ T ++ + + +
Sbjct: 211 VPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVND 270
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
LE RME E F + +N L+ +C + + +A ++ + R P+ +
Sbjct: 271 FLE---RMEEEGF----EPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYT 323
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + G V +H M+ RG P +V++N I GYCK+G ++ L EM
Sbjct: 324 ALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGS 383
Query: 277 ACLPSLQTITTLIHG----AGLVRNIH-------------------------------QA 301
P T LI G A +V ++ A
Sbjct: 384 GICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAA 443
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
+ L + +R P + YN +I SL + + A+ + EM + I +TY +
Sbjct: 444 KSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKALICC 503
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L ++S L + M++ +P LM +C
Sbjct: 504 LCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYC 540
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/355 (22%), Positives = 145/355 (40%), Gaps = 42/355 (11%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L +F + K +F + ++ F P + + R D A+ L +
Sbjct: 253 NILTHVFCQDGDVDKVNDFLE-RMEEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMY 311
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
R + L L S + +++ + K E + F RM I G+ FN L+ +C
Sbjct: 312 RRN-VLPDLVSYTALMNGLCKEGKVREAHQLFHRM---IHRGLNP-DIVSFNTLICGYCK 366
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF-KESGDVTAMEM--------------F 234
+ +M+E+RS+ +++ S P+ T +L+ G+ KE+ V+A+ +
Sbjct: 367 EGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDI 426
Query: 235 YHEMVL--------------------RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
Y +++ RG+ P V YN I+ CK DA+ + EM
Sbjct: 427 YDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKSEMG 486
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
PS T LI +A L +EM + + PD A++ + RD+
Sbjct: 487 HRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIG 546
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
A L+ ++ D+ +Y+T+ + + + +L DRM++ F P +T
Sbjct: 547 KAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQT 601
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 87/206 (42%), Gaps = 5/206 (2%)
Query: 169 IFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFK 223
+ V + +FG ++ ++ L+ + C + A+S+ ++ R + P + N L+
Sbjct: 411 LVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLC 470
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+S + + EM R +PS +TY I C+ +A L EEM + LP
Sbjct: 471 KSDSIADALLVKSEMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPD 530
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
L+H R+I +A L K D +YN ++ + D MEL D M
Sbjct: 531 ICRALMHVYCKERDIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRM 590
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLE 369
+ + T+ M GL K+ +E
Sbjct: 591 LKVGFAPNIQTFRQMIHGLWKAMAVE 616
>gi|359474664|ref|XP_003631508.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g80550, mitochondrial-like [Vitis vinifera]
Length = 384
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 166/355 (46%), Gaps = 23/355 (6%)
Query: 48 QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFT-PTPDA 105
+P+ P PQ++P+ S L + + + ++N K ALEFF + F PT +
Sbjct: 16 KPIDPE-----PQSSPIISPLRQTL-----SCYANDWKRALEFFNWVQTQSGFNHPTDTS 65
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
+ + + IL++ F W L+ ++ + + I+ + EE + A+DR
Sbjct: 66 YNRMIDILSKFFEFYLVWVLIQRMKARPSCVPNHATFCIVFKHYASAHLVEEAMNAYDRT 125
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN--KTMNILLLGFK 223
E F ++ + L+ A C K + EA +F++ N+ K +++L G+
Sbjct: 126 EEFNFKDETRYSN-----LIDALCEYKHVIEAEELFIRESKDLVFNDDVKIYDMILRGWF 180
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ G F+ EM R S+ +Y+I +D CK G A++L++EM+ +
Sbjct: 181 KMGXWKKCREFWEEMDWRSGCKSLCSYSIYMDIQCKGGRPWRAVKLYKEMKTXGIRLDVV 240
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+I GL + + +++ EM + +P++ Y+ +I L + A ++D+M
Sbjct: 241 AYNAVIRAIGLSEGVDFSIRVYREMKELGCEPNVVTYDTIIKLLCEHGRIREAYGVLDQM 300
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFF 397
EK + +TYH FFG ++ + + +++DRMI + + T VMLMK F
Sbjct: 301 REKDCAPNVMTYHC-FFGCLEKP--KQIFRMFDRMINSVGGLGRMDTYVMLMKKF 352
>gi|38567720|emb|CAE76009.1| B1358B12.18 [Oryza sativa Japonica Group]
gi|90265197|emb|CAH67636.1| B0812A04.6 [Oryza sativa Indica Group]
Length = 609
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 5/303 (1%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K ++++ + + FD M+ G+R+ FN ++ C ++ A +
Sbjct: 241 KLFNVLMRDLVRLGELASAQNVFDEMQSR---GVRRT-VVSFNTMISGMCRAGDLDGAET 296
Query: 200 VFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ ++ + P+ T L+ G G + + +M RG +P+ V + I ID +C
Sbjct: 297 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 356
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KKG + L EM P T +++G R++ A + EM L+PD
Sbjct: 357 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 416
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + +L+ AME+ M + +G D VTY + GL K+ ++ M
Sbjct: 417 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 476
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+E P T M++ FC V GL L + ++G P ++++ G C G+
Sbjct: 477 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 536
Query: 439 EEA 441
+ A
Sbjct: 537 KNA 539
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 196 EARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EA + +++LL + P K N+L+ G++ + + + EM RG R +VV++N I
Sbjct: 223 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 282
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G C+ G A L M P + T LI G V I AR +F++M R +K
Sbjct: 283 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 342
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P+ + +I + + D +EL EM E+ + D VTY+ + GL ++ L+ +
Sbjct: 343 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 402
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
M P T T L+ +C +D+ + + ++ G L++GL
Sbjct: 403 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 462
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
GR +A +M+ + +Y M+
Sbjct: 463 AGRSADAERVLGEMMEAGLEPDNTTYTMV 491
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 101/259 (38%), Gaps = 36/259 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q C +++AR VF K+ R PN IL+ + GD M + EM
Sbjct: 313 YGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 372
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
RG RP VTYN ++G C+ A + EM P T TTLI G
Sbjct: 373 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 432
Query: 292 ---------------------AGLVRNIHQA------RQLFDEMPKRNLKPDIGAYNAMI 324
L+ + +A ++ EM + L+PD Y +I
Sbjct: 433 MAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVI 492
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R D+ + L+ EM+ K VTY+ + G K ++ L + MI
Sbjct: 493 DAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS 552
Query: 385 PKTRTVVMLMKFFCVNFRV 403
P T +L+ C + +V
Sbjct: 553 PDDITYNILLDGHCKHGKV 571
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL D L P+ +N ++ L+R +L +A + DEM+ + + V+++TM G+
Sbjct: 230 QLLDA----GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 285
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ L+G L+ RM E P T L++ C R++ ++ + RG P+
Sbjct: 286 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 345
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+L+ C +G E E ++M R + +Y + L +A
Sbjct: 346 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 393
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 68/153 (44%), Gaps = 10/153 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +A V +++ + P+N T +++ F GDV EM
Sbjct: 453 YTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQ 512
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA---GLVR 296
+G +P VVTYN+ ++G+CK G +A L M + P T L+ G G V
Sbjct: 513 NKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVSPDDITYNILLDGHCKHGKVT 572
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+I + + + PD+G Y +++ +++
Sbjct: 573 DIEELKS------AKGTVPDLGVYTSIVGEIVK 599
>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
Length = 827
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/389 (23%), Positives = 164/389 (42%), Gaps = 11/389 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA + FK +Q P + +H L + R D+A + + +R P+ T ++
Sbjct: 250 KACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ S ++E + F M R + ++L+ + C ++KEAR VF
Sbjct: 309 ---IYGYSSTGQWKEAVRVFKEMRRHSILP----DVVTLSMLMGSLCKYGKIKEARDVFD 361
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + P+ + NI+L G+ G + M + M+ G P T+N+ I Y G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
AM +F EM P + T T+I + + A + F++M + + PD AYN
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L A EL+ E+ + D V + ++ L K + ++D +
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 541
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P MLM +C+ +++ L ++ ++ G P+ LV G C GR +E
Sbjct: 542 GLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQA 470
++ML R + S Y ++ L QA
Sbjct: 602 LSLFREMLQRGIKPSTILYSIIIDGLFQA 630
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 137/313 (43%), Gaps = 15/313 (4%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIFVGIRKFGSEEFNVLL 185
R H L + ++S+++ + K+ +E + FD M ++F +N++L
Sbjct: 329 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF---------SYNIML 379
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+ T+ + + +F +L AP+ T N+L+ + G + + ++EM G +
Sbjct: 380 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 439
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VVTY I C+ G DAM F +M P LI G ++ +A++L
Sbjct: 440 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 499
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
E+ + DI ++++I++L + + A + D + D V Y + G
Sbjct: 500 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCL 559
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+E +++D M+ P L+ +C R+D GL+L+ ++ RG P
Sbjct: 560 VGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 619
Query: 425 LDLLVTGLCSRGR 437
+++ GL GR
Sbjct: 620 YSIIIDGLFQAGR 632
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 3/273 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFA---PNNKTMNILLLGFKESGDVTAMEMFYH 236
+++LL++ C Q + +A + + A PN N ++ GF + GDV +
Sbjct: 197 SYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFK 256
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EMV RG P +VTYN + CK A +M LP+ T LI+G
Sbjct: 257 EMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTG 316
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+A ++F EM + ++ PD+ + ++ SL + + A ++ D M K D +Y+
Sbjct: 317 QWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYN 376
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
M G L + L+D M+ P T +L+K + +D + ++ + D
Sbjct: 377 IMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDH 436
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
G P ++ LC G+ ++A E QM+
Sbjct: 437 GVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMI 469
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 184 LLQAFCTQKEMKE-ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVL 240
+L CT+ E A + F +LL + N N LL GF E+ A+++ H
Sbjct: 129 ILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE 188
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNI 298
G P V +Y+I + C +G G A L M C P++ T+I G ++
Sbjct: 189 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 248
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
++A LF EM +R + PD+ YN+++ +L + R ++ A + +M KR+ +N TY+ +
Sbjct: 249 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+G + + +++ M +P T+ MLM C ++ +++ + +G
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368
Query: 419 CPHGHALDLLVTGLCSRG 436
P + ++++ G ++G
Sbjct: 369 NPDVFSYNIMLNGYATKG 386
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 90/395 (22%), Positives = 167/395 (42%), Gaps = 59/395 (14%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSYE 156
PD F + A D+A + + + R H P ++T +++ L RI K +
Sbjct: 404 APDFYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKM---D 459
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMN 216
+ +E F++M + V K+ +N L+Q FCT + +A+ +L+S N ++
Sbjct: 460 DAMEKFNQMIDQ-GVAPDKYA---YNCLIQGFCTHGSLLKAK----ELISEIMNNGMHLD 511
Query: 217 ILLLG-----FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
I+ + G V + + V G P V Y++ +DGYC G A+R+F+
Sbjct: 512 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFD 571
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC- 330
M P++ TL++G + I + LF EM +R +KP Y+ +I L +
Sbjct: 572 AMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAG 631
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
R + A M+ EM E I D TY+ + GL K+ + +D I
Sbjct: 632 RTVPAKMKF-HEMTESGIAMDICTYNIVLRGLFKN-------RCFDEAI----------- 672
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+ + +N ++++ L+ ++ G+ R EEA + +
Sbjct: 673 FLFKELRAMNVKINI-----------------ITLNTMIDGMFQTRRVEEAKDLFASISR 715
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
R + +Y ++ L++ E+ ED+ ++N
Sbjct: 716 SRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQN 750
>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g63070, mitochondrial; Flags: Precursor
gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 590
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 161/370 (43%), Gaps = 17/370 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F K L +A+M FD L +Q S L + SI ++ + L
Sbjct: 73 PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISH-NLYTYSIFINYFCRRSQLSLALA 131
Query: 161 AFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNI 217
+M + +G N LL FC + EA ++ +++ + P+ T
Sbjct: 132 ILGKMMK------LGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTT 185
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + + MV++G +P +VTY I+G CK+G A+ L +ME+
Sbjct: 186 LVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGK 245
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+ T+I G +++ A LF++M + +KPD+ YN +IS L + A
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKF 396
L+ +M EK I D V ++ + +K L KLYD M++ K P L+K
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
FC RV+ G+ ++ + RG + L+ G + +A +C +V ++ VS
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHG------FFQARDCDNAQMVFKQMVS 419
Query: 457 EASYRMLQRY 466
+ + + Y
Sbjct: 420 DGVHPDIMTY 429
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/258 (26%), Positives = 119/258 (46%), Gaps = 6/258 (2%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ ++ + K++ ++ + F++ME + GI+ +N L+ C +A +
Sbjct: 254 NTIIDGLCKYKHMDDAFDLFNKMETK---GIKP-DVFTYNPLISCLCNYGRWSDASRLLS 309
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKK 260
+L + P+ N L+ F + G + E Y EMV + P VV YN I G+CK
Sbjct: 310 DMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKY 369
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+ M +F EM + + + T TTLIHG R+ A+ +F +M + PDI Y
Sbjct: 370 KRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTY 429
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N ++ L ++ A+ + + M+++ + D VTY TM L K+ +E L+ +
Sbjct: 430 NILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSL 489
Query: 381 GKFVPKTRTVVMLMKFFC 398
P T +M FC
Sbjct: 490 KGVKPNVVTYTTMMSGFC 507
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 3/215 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+++M +G +P V TYN I C G + DA RL +M P L LI
Sbjct: 272 LFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFV 331
Query: 294 LVRNIHQARQLFDEMPK-RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A +L+DEM K ++ PD+ AYN +I + + + ME+ EM ++ + +
Sbjct: 332 KEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNT 391
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
VTY T+ G ++ + ++ +M+ P T +L+ C N V+ L ++ Y
Sbjct: 392 VTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEY 451
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFE--CS 445
+ R ++ LC G+ E+ ++ CS
Sbjct: 452 MQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCS 486
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 86/180 (47%), Gaps = 1/180 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ FC K ++E VF ++ R N T L+ GF ++ D +M + +MV
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P ++TYNI +DG C G A+ +FE M++ + T TT+I +
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
LF + + +KP++ Y M+S R A L EM+E ++ TY+T+
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLI 538
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/163 (22%), Positives = 71/163 (43%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A LF +M K P I ++ ++S++ + + + L ++M+ I H+ TY
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ S L + +M++ + P T+ L+ FC R+ + L +++ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ P LV GL + EA ++M+V+ Q +Y
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY 218
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 38/184 (20%), Positives = 77/184 (41%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ LF +M + PS+ + L+ + L ++M + ++ Y+ I
Sbjct: 58 DAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFI 117
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R L+ A+ ++ +M + G VT +++ G + + L D+M+E +
Sbjct: 118 NYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQ 177
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T L+ + + + L ++ +G P ++ GLC RG + A
Sbjct: 178 PDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNL 237
Query: 445 SKQM 448
+M
Sbjct: 238 LNKM 241
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 51/236 (21%), Positives = 88/236 (37%), Gaps = 19/236 (8%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV- 129
N L + F + + +E F+ Q T + +H + R D A + +
Sbjct: 360 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTV-TYTTLIHGFFQARDCDNAQMVFKQMV 418
Query: 130 -QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
HP ++T +I+L + + E L F+ M++ K + +++A
Sbjct: 419 SDGVHPDIMTY---NILLDGLCNNGNVETALVVFEYMQKRDM----KLDIVTYTTMIEAL 471
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C ++++ +F L L PN T ++ GF G + + EM G P+
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-IHQAR 302
TYN I + G + L +EM T GLV N +H R
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEMRSCGFAGDASTF-------GLVTNMLHDGR 580
>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
Length = 761
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 140/305 (45%), Gaps = 2/305 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+ +Q C + + A S+ ++ P+ T N L+ G ++ +V E + H++V
Sbjct: 254 FNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLV 313
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P TYN IDGYCK G +A ++ + +P T +LI+G I
Sbjct: 314 NGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF+ + LKP + YN +I L + + A+++M+EM E D TY+ +
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + L + I +VP T L+ +C +++ + + + G
Sbjct: 434 NGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT 493
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN-ANEKLED 478
P + ++ GL + E+ E + M+ + ++ +Y +L L +A NE L+
Sbjct: 494 PDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDL 553
Query: 479 LDRMI 483
+D ++
Sbjct: 554 VDEIL 558
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/339 (20%), Positives = 156/339 (46%), Gaps = 10/339 (2%)
Query: 113 LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L R A ++ V R P ++T ++ L + S +EA + + +
Sbjct: 261 LCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSN------VVEAEKYLHKLVN 314
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
G+ G +N L+ +C ++ A + + + F P+ T L+ G ++ ++
Sbjct: 315 GGLEPDGFT-YNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEID 373
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
++ + +G +P+V+ YN+ I G C++G A+++ EM C + T +I
Sbjct: 374 RALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVI 433
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G + + A L ++ + PD+ +N +I + + ++++++M +
Sbjct: 434 NGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVT 493
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D +TY+++ GL K+ E + + ++ M+E VP T +L + C +V+ L+L
Sbjct: 494 PDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDL 553
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++++G P + +++G + G + A++ ++M
Sbjct: 554 VDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/318 (21%), Positives = 150/318 (47%), Gaps = 13/318 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-----TMNILLLGFKESGDVTAMEMFY 235
+N+L++ C + + +A +++++ + N T N+++ G + G V+
Sbjct: 394 YNMLIKGLCQEGLILQA----LQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLM 449
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
++ + +G+ P V T+N IDGYCK+ +++ +M P + T ++++G
Sbjct: 450 NDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKA 509
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ F+ M ++ P+ YN + SL + +N A++L+DE+ K I D V++
Sbjct: 510 VKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSF 569
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
T+ G + L+G +L+ RM E K T T +++ F + +G L+ +
Sbjct: 570 ATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMG 629
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANAN 473
G P + +++ G C G + ++ +M+ + S ++ R++ VQ +
Sbjct: 630 AGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVH 689
Query: 474 EKLEDLDRMIKNLQAVLP 491
E ++ + M+ N ++P
Sbjct: 690 EAVDIIHFMVHN--GIVP 705
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 140/317 (44%), Gaps = 10/317 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
PS+L+ ++ +L F+ + + F RM+ VGI F + +++FC K
Sbjct: 109 PSVLSYNAIMNILVESGYFK---QAHKVFLRMKN---VGIVP-DVYTFTIRIKSFCRTKR 161
Query: 194 MKEARSVFVKLLSRFAPNNKTMNILLLG--FKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
A + ++S+ N ++ ++E+ V A E+F ++M+ G P V T+N
Sbjct: 162 PHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELF-NDMLRIGIFPDVSTFN 220
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ CKKG ++ RL ++ + +L T I G + A + D + +
Sbjct: 221 KLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIRE 280
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
L PD+ YN +I L + ++ A + + ++ + D TY+T+ G K L+
Sbjct: 281 GLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNA 340
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
K+ I FVP T L+ C N +D L L+ + +G P ++L+ G
Sbjct: 341 EKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKG 400
Query: 432 LCSRGRWEEAFECSKQM 448
LC G +A + +M
Sbjct: 401 LCQEGLILQALQMMNEM 417
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 142/348 (40%), Gaps = 18/348 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM------LSRISKFQS 154
P+ ++ ++IL YF QA H L +K++ I+ RI F
Sbjct: 109 PSVLSYNAIMNILVESGYFKQA----------HKVFLRMKNVGIVPDVYTFTIRIKSFCR 158
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
+ A + + G + + + ++ F + EA +F +L P+
Sbjct: 159 TKRPHSALRLLNNMVSQGCQ-LNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVS 217
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N LL + G+V E ++++ +G ++ T+NI I G C+KG AM + + +
Sbjct: 218 TFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
R P + T TLI G N+ +A + ++ L+PD YN +I + L
Sbjct: 278 IREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGML 337
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A +++ K D TY ++ GL ++ ++ L++ + P ML
Sbjct: 338 QNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNML 397
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+K C + L + + + G +L++ GLC G +A
Sbjct: 398 IKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDA 445
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/312 (19%), Positives = 117/312 (37%), Gaps = 41/312 (13%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ G V + M PSV++YN ++ + G F A ++F M+ V +P
Sbjct: 86 YGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPD 145
Query: 282 LQTITTLIHGAGLVRNIH-----------------------------------QARQLFD 306
+ T T I + H +A +LF+
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M + + PD+ +N ++ +L + ++ + L++++ +K + + T++ GL +
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALD 426
L G + D +I P T L+ C N V L++ G P G +
Sbjct: 266 MLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYN 325
Query: 427 LLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
L+ G C G + A + + + + E +Y L L Q +++DR +
Sbjct: 326 TLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQN------DEIDRALALF 379
Query: 487 QAVLPPPTRQQV 498
A L + V
Sbjct: 380 NAALGKGLKPTV 391
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 99/256 (38%), Gaps = 49/256 (19%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F D + K L + ++ ++ W SH P ++T S+ L+ +SK E+
Sbjct: 464 FNTLIDGYCKQLKMETTIQILNKMW---SH--GVTPDVITYNSV---LNGLSKAVKNEDL 515
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV---------------FVK 203
+E F+ M + V + +N+L ++ C ++ EA + F
Sbjct: 516 METFETMVEKGCVPNKI----TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFAT 571
Query: 204 LLSRFAPNNK----------------------TMNILLLGFKESGDVTAMEMFYHEMVLR 241
++S FA N T NI++ F E D+ E + EM
Sbjct: 572 IISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAG 631
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G P TY + IDG+C G + EM +PSL T +I+ + +H+A
Sbjct: 632 GCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEA 691
Query: 302 RQLFDEMPKRNLKPDI 317
+ M + P++
Sbjct: 692 VDIIHFMVHNGIVPEV 707
>gi|297821008|ref|XP_002878387.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297324225|gb|EFH54646.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 766
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 108/437 (24%), Positives = 188/437 (43%), Gaps = 53/437 (12%)
Query: 91 KFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRIS 150
K L+ P F + ++I RM A L + P ++TL I+++ +
Sbjct: 289 KAPLEAPPFNALLSCLGRNMNI-GRM----NALVLKMDEMKIRPDVVTL---GILINTLC 340
Query: 151 KFQSYEETLEAFDRM--EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV--KLLS 206
K + +E L+ F++M +R + K S FN L+ C +KEA + V K+
Sbjct: 341 KSRRVDEALQVFEQMCGKRTDDGNVIKADSIHFNTLIDGLCKVGRLKEAEELLVRMKMEE 400
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R PN T N L+ G+ +G + + M G +P VVT N + G C+ A
Sbjct: 401 RCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTVNTIVGGMCRHHGLNMA 460
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
+ F +ME+ ++ T TLIH + NI +A FD+M + PD Y A+IS
Sbjct: 461 VLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISG 520
Query: 327 LIRCR--------------------------------DLNAA---MELMDEMEEKRIGHD 351
L + R D N A E++ +ME++ + D
Sbjct: 521 LCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPD 580
Query: 352 NVTYHTM--FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
++TY+T+ FFG K E V ++ ++M E + P T +++ +C + L L
Sbjct: 581 SITYNTLISFFG--KHKDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKL 638
Query: 410 WGYLIDRG-FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
+ + R P+ ++L+ G + +A ++M ++ + + +Y L + L
Sbjct: 639 FKDMGLRSKVNPNTVIYNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLK 698
Query: 469 QANANEKLEDL-DRMIK 484
+ N E L L D M++
Sbjct: 699 EKNQAETLLKLMDEMVE 715
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 2/190 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ FC + ++ + + P++ T N L+ F + D ++E +M
Sbjct: 549 YNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKHKDFESVERMMEQMR 608
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME-RVACLPSLQTITTLIHGAGLVRNI 298
P+V TY I+ YC G G+A++LF++M R P+ LI+ + N
Sbjct: 609 EDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVIYNILINAFSKLGNF 668
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
QA L +EM + ++P++ YNA+ L ++LMDEM E+ + +T +
Sbjct: 669 GQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMVEQSCEPNQITMEIL 728
Query: 359 FFGLMKSSGL 368
L S L
Sbjct: 729 MERLSGSDEL 738
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/304 (22%), Positives = 120/304 (39%), Gaps = 10/304 (3%)
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+ + C A + L+ AP N LL + ++ M +M
Sbjct: 266 ISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNMNIGRMNALVLKMDEMKI 325
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-------ERVACLPSLQTITTLIHGAGLVR 296
RP VVT I I+ CK +A+++FE+M V S+ TLI G V
Sbjct: 326 RPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKADSIH-FNTLIDGLCKVG 384
Query: 297 NIHQARQLFDEMP-KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A +L M + P+ YN +I R L A E++ M+E I D VT
Sbjct: 385 RLKEAEELLVRMKMEERCVPNTVTYNCLIDGYCRAGKLETAKEVVSRMKEDGIKPDVVTV 444
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G+ + GL + M + T + L+ C ++ ++ + +++
Sbjct: 445 NTIVGGMCRHHGLNMAVLFFMDMEKEGVKGNVVTYMTLIHACCSLSNIEKAMHWFDKMLE 504
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
G P L++GLC R +A +++ + +Y ML N EK
Sbjct: 505 AGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLREGGFSLDLLAYNMLIGLFCDKNNAEK 564
Query: 476 LEDL 479
+ ++
Sbjct: 565 VYEM 568
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/256 (22%), Positives = 107/256 (41%), Gaps = 45/256 (17%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF----KESGDVTAMEMFY 235
+ L+ A C+ +++A F K+L + +P+ K L+ G ++ + +E
Sbjct: 479 YMTLIHACCSLSNIEKAMHWFDKMLEAGCSPDAKIYYALISGLCQVRRDHDAIRVVEKLR 538
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI------ 289
GF ++ YN+ I +C K + +ME+ P T TLI
Sbjct: 539 E----GGFSLDLLAYNMLIGLFCDKNNAEKVYEMLTDMEKEGMKPDSITYNTLISFFGKH 594
Query: 290 ------------------------HGAGL-----VRNIHQARQLFDEMPKRN-LKPDIGA 319
+GA + V + +A +LF +M R+ + P+
Sbjct: 595 KDFESVERMMEQMREDELDPTVATYGAVIEAYCSVGELGEALKLFKDMGLRSKVNPNTVI 654
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I++ + + A+ L +EM+ K + + TY+ +F L + + E + KL D M+
Sbjct: 655 YNILINAFSKLGNFGQALSLKEEMKMKMVRPNVETYNALFKCLKEKNQAETLLKLMDEMV 714
Query: 380 EGKFVPKTRTVVMLMK 395
E P T+ +LM+
Sbjct: 715 EQSCEPNQITMEILME 730
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 94/215 (43%), Gaps = 10/215 (4%)
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACL--PSLQTITTLIHGAGLVRNIHQAR--QLFD 306
N+ ID + G DA ++ +EM + + P+ T ++H R + + + L
Sbjct: 189 NVVIDVLLRNGLVDDAFKVLDEMLQKESVFPPNRITADIVLHEVWKGRLLTEEKIIGLIS 248
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+ P+ ISSL + NAA +++ ++ + + + ++ + L ++
Sbjct: 249 RFSSHGVSPNSVWLTRFISSLCKNARTNAAWDILSDLMKNKAPLEAPPFNALLSCLGRNM 308
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW----GYLIDRGFCPHG 422
+ + L +M E K P T+ +L+ C + RVD L ++ G D G
Sbjct: 309 NIGRMNALVLKMDEMKIRPDVVTLGILINTLCKSRRVDEALQVFEQMCGKRTDDGNVIKA 368
Query: 423 HAL--DLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
++ + L+ GLC GR +EA E +M + R V
Sbjct: 369 DSIHFNTLIDGLCKVGRLKEAEELLVRMKMEERCV 403
>gi|357166306|ref|XP_003580667.1| PREDICTED: pentatricopeptide repeat-containing protein At1g80550,
mitochondrial-like [Brachypodium distachyon]
Length = 441
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/371 (23%), Positives = 172/371 (46%), Gaps = 12/371 (3%)
Query: 85 KALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYFDQAWELM-SHVQRTHPSLLTLKS 141
+AL+FF ++ + PT + + IL + F A L+ SH + P+ L +
Sbjct: 50 RALDFFHWSASPAGANLPPTAATLSRAIDILGKHFEFPLATSLLLSHHDPSDPAFLR-PA 108
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV- 200
+ +L+R++ ++ + F+ I G+R S F++L+ A C + + EA +
Sbjct: 109 LRALLNRLAAANLVDDAVRVFESTAGSI--GLRDEAS--FHLLIDALCDHRRVDEAHHLC 164
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
F K F P KT N+LL G+ ++ T + + +M RG + +Y+I +D K
Sbjct: 165 FGKAPPPFPPGTKTHNLLLRGWAKTRAWTRLRQHWFDMDNRGVAKDLHSYSIYMDALAKS 224
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+++F+EM++ + T IH GL + + + +L+ +M KP+ +
Sbjct: 225 GKPWKAVKVFKEMKQKRLPVDIVAYNTAIHAIGLAQGVDFSVRLYRQMVDAGCKPNTATF 284
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N ++ L + + +M + + +TYH F L + + V L+++M+E
Sbjct: 285 NTIVKLLCKEGRFREGYAFVQQMHKAGCEPNVLTYHCFFQYLSRP---QEVLVLFEKMLE 341
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P+ T VML+K F + +W + ++G P A + L+ L +G +
Sbjct: 342 RGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTMEEQGLSPDAFAYNTLIDALLEKGMVDL 401
Query: 441 AFECSKQMLVR 451
A + ++ML +
Sbjct: 402 ARKYDEEMLAK 412
>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
Length = 500
Score = 112 bits (279), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 194/438 (44%), Gaps = 53/438 (12%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
E KF + + TP+ T+ I L + D+A L+S + ++ P+ +T S+
Sbjct: 64 EARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCVPTAVTYNSL-- 121
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVG-IRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
IS E EA+D +E ++ G I + + L+ FC K+ +A VF +
Sbjct: 122 ----ISGLCKAERASEAYDLLEEMVYSGCIPDIFT--YTTLITGFCKSKKSDDALRVFEQ 175
Query: 204 LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKG 261
L++R F P+ T + L+ G + G + + M+ G P+ VTYN I G+C+ G
Sbjct: 176 LVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMG 235
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+AM L E M P + T TTL++G + + A L ++M ++ L PD+ +
Sbjct: 236 KMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFT 295
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE------------ 369
+++ L R L+ A+ ++ EM K TY+T+ G +++ LE
Sbjct: 296 SLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDC 355
Query: 370 ------------GVCKLYDRMIEGKFVPKTR------TVVM---LMKFFCVNFRVDLGLN 408
G+CK+ + V + R VVM ++ C +VD
Sbjct: 356 PPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACR 415
Query: 409 LWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
++ +++ C P+ L+TGLC+ G + A + + + + +Y +L
Sbjct: 416 VYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRA----RGYIEKGCVPNIGTYNLLIDAF 471
Query: 468 VQANANEKL-EDLDRMIK 484
+AN +E E LD M++
Sbjct: 472 RKANRDEDARELLDDMVQ 489
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 125/282 (44%), Gaps = 5/282 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ A C + + EAR ++ +R PN T +L+ G + G V +M
Sbjct: 49 YTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR 108
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P+ VTYN I G CK +A L EEM C+P + T TTLI G +
Sbjct: 109 KKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSD 167
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYHTM 358
A ++F+++ R +PD+ Y+ +I L + L A++L M + + VTY+++
Sbjct: 168 DALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSL 227
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + ++ L +RM E P T LM FC R+D +L + +G
Sbjct: 228 ISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGL 287
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
P L+ GLC R +A +M RR+ S Y
Sbjct: 288 TPDVVTFTSLMDGLCRENRLSDAVHILGEM--RRKSCSPTVY 327
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 97/202 (48%), Gaps = 1/202 (0%)
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
VTY I G CK A+ +M P + T T +IH + +H+AR+ +E
Sbjct: 12 VTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEE 71
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M RNL P++ Y +I L + ++ A+ L+ +M +K + VTY+++ GL K+
Sbjct: 72 MANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAER 130
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L + M+ +P T L+ FC + + D L ++ L+ RGF P
Sbjct: 131 ASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190
Query: 428 LVTGLCSRGRWEEAFECSKQML 449
L+ GLC GR +EA + +M+
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMI 212
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 104/217 (47%), Gaps = 2/217 (0%)
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+F +MV +GF P V TY I C + +A + EEM P++ T T LI G
Sbjct: 32 IFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEMANRNLTPNVVTYTVLIDGL 91
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A L +M K+ + P YN++IS L + + A +L++EM D
Sbjct: 92 CKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDI 150
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
TY T+ G KS + +++++++ F P T L+ C R+ ++L+G
Sbjct: 151 FTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGR 210
Query: 413 LIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+I G C P+ + L++G C G+ +EA ++M
Sbjct: 211 MIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERM 247
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 115/254 (45%), Gaps = 19/254 (7%)
Query: 102 TPDAFEKT--LHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEE 157
+PD T ++ ++ D A++L++ + R P ++T S+ L R ++
Sbjct: 253 SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVH 312
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI 217
L R V +N +L +C +++EAR ++ + PN + NI
Sbjct: 313 ILGEMRRKSCSPTV-------YTYNTILDGYCRANQLEEARKFMLEEMD-CPPNVVSFNI 364
Query: 218 LLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ER 275
++ G K + AME+ E R P VV Y IDG C++ +A R++ +M E
Sbjct: 365 MIRGLCKVNRSSEAMELV-EEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEE 423
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
CLP+ T +TLI G + +AR + + P+IG YN +I + +
Sbjct: 424 PGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGTYNLLIDAFRKANRDED 479
Query: 336 AMELMDEMEEKRIG 349
A EL+D+M ++ G
Sbjct: 480 ARELLDDMVQRGFG 493
>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
Length = 742
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 105/386 (27%), Positives = 172/386 (44%), Gaps = 33/386 (8%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSM 142
K LE ++ F+P + + + D A +L+ +++ P ++T +
Sbjct: 109 KGLELLG-EMRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNA- 166
Query: 143 SIMLSRISKFQSYEETLEA---FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
RIS S + LEA F M+ + +G+ + +N++L FC + ++EAR+
Sbjct: 167 -----RISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARA 221
Query: 200 VFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F K+ +S N ++ NI LLG G + ++ EMV G P+V +YNI +DG C
Sbjct: 222 LFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLC 281
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G DA L M LP T TTL+HG + +A + EM + P+
Sbjct: 282 KNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNY 341
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
N ++ SL + ++ A EL+ +M EK D VT + + GL + L D+
Sbjct: 342 TCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKL-------DKA 394
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID---RGFC-PHGHALDLLVTGLCS 434
IE +V M +LG + G + D R C P + +++GLC
Sbjct: 395 IE---------IVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYSTIISGLCK 445
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASY 460
GR EA + +M+ + Q A Y
Sbjct: 446 AGRVGEAKKKFIEMMGKNLQPDSAIY 471
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 120/277 (43%), Gaps = 24/277 (8%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ LL +C ++ EA +V +++ +PNN T NILL + G ++ E +M
Sbjct: 308 YTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMN 367
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-----------------------ERV 276
+G+ VT NI IDG C G A+ + M R
Sbjct: 368 EKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK 427
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C+P L + +T+I G + +A++ F EM +NL+PD Y+ I S + +++A
Sbjct: 428 KCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
++ +ME+K TY+++ GL + + + L D M E P ++
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
C RV ++ ++ +G P+ + +L+ C
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFC 584
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 132/316 (41%), Gaps = 41/316 (12%)
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGD 227
EI G+ GS L ++ + ++R + P+ + + ++ G ++G
Sbjct: 396 EIVNGMWTHGSAALGNLGNSYIGLVDDSDSRK-------KCMPDLISYSTIISGLCKAGR 448
Query: 228 VTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITT 287
V + + EM+ + +P Y++ I +CK+G A R+ ++ME+ C +LQT +
Sbjct: 449 VGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKGCNKTLQTYNS 508
Query: 288 LIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKR 347
LI G G I + L DEM +R + PD+ YN ++SSL + A ++DEM +K
Sbjct: 509 LIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDEMLQKG 568
Query: 348 I----------------------------------GHDNVTYHTMFFGLMKSSGLEGVCK 373
I GH Y F L+ + +
Sbjct: 569 ISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSLTFNELLVGGEVVKAKE 628
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L++ ++ F L+ C + ++D + LID+G+ + ++ GL
Sbjct: 629 LFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLG 688
Query: 434 SRGRWEEAFECSKQML 449
RG EA E +++M+
Sbjct: 689 KRGNKHEADELAEKMM 704
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 124/263 (47%), Gaps = 9/263 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK--LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+NVLL++ CT++ + S K + S +P T N+L+ +SG + + +M
Sbjct: 24 YNVLLRS-CTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARELFDKM 82
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P+ ++ I + GYC+ G + L EM R+ P+ TLI
Sbjct: 83 PEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCKEGKT 142
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME-EKRIG---HDNVT 354
A +L DEM K L PD+ +NA IS+L + A + +M+ ++ +G + +T
Sbjct: 143 DDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQPNIIT 202
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y+ M G K LE L+++M + + + + L+ + ++ L L +
Sbjct: 203 YNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL-KEM 261
Query: 414 IDRGFCPHGHALDLLVTGLCSRG 436
+D G P+ ++ ++++ GLC G
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNG 284
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 91/210 (43%), Gaps = 7/210 (3%)
Query: 196 EARSVFVKLLSRFAPNNKTM---NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+A S F L RF N ++ N+LL + G V + +MV G P T+N+
Sbjct: 2 KAISQFKSLRFRFPENPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNV 61
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
I C GC DA LF++M C P+ + L+ G + +L EM +
Sbjct: 62 LIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLG 121
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
P+ YN +ISS + + A +L+DEM + + D VT++ L S +
Sbjct: 122 FSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEAS 181
Query: 373 KLYDRM----IEGKFVPKTRTVVMLMKFFC 398
+++ M + G P T +++ FC
Sbjct: 182 RIFRDMQIDEVLGLPQPNIITYNLMLGGFC 211
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 93/209 (44%), Gaps = 14/209 (6%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ +N L+ ++ ++ E + ++ R +P+ N +L E G V E
Sbjct: 504 QTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA----CLPSLQTITTLIHGAG 293
M+ +G P++ +++I I +CK F +FE V L SL T L+ G
Sbjct: 564 MLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYSL-TFNELLVGGE 622
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGA--YNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
+V+ A++LF+ R+ D+G Y +I L + L+ A ++ ++ +K D
Sbjct: 623 VVK----AKELFETALDRSF--DVGNFLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFD 676
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ + GL K +L ++M+E
Sbjct: 677 PASFMPVIDGLGKRGNKHEADELAEKMME 705
>gi|449436958|ref|XP_004136259.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
gi|449497032|ref|XP_004160294.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g18475-like [Cucumis sativus]
Length = 504
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 136/267 (50%), Gaps = 5/267 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN+L++ C +++ A V ++ S PN T + L+ G E+G + F+ EM
Sbjct: 193 FNILVKHHCRNGDLQAAFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEM 252
Query: 239 VLR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
V + P +TYNI I+G+C++G A + E M+ C P++ + L++G
Sbjct: 253 VSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGR 312
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A+++F+E+ +KPD +Y +I+ L R ++ A EL+ +M++K D VT++
Sbjct: 313 LQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNV 372
Query: 358 MFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
M GL + + + ++ EG ++ K ++L F + L G +++R
Sbjct: 373 MLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVL-NFLTQKGELRKATELLGLMLNR 431
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFE 443
GF PH + L+ LC+ G ++A E
Sbjct: 432 GFVPHHATSNTLLLLLCNNGMVKDAVE 458
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/363 (22%), Positives = 160/363 (44%), Gaps = 14/363 (3%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
+ ++S Q + + T S+ L++ KFQ+ + L ++ GI F
Sbjct: 70 FNMVSEQQGFNHNHATYASIIQNLAKYKKFQAIDGVLHQMTYDTCKVHEGI-------FL 122
Query: 183 VLLQAFCTQKEMKEARSVF--VKLLSRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMV 239
L++ F + +F +K + R P+ K ++ L ES V A ++ +
Sbjct: 123 NLMKHFSKSSMHERVLDMFYAIKSIVREKPSLKAISTCLNLLVESDRVDLARKLLVNARS 182
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME--RVACLPSLQTITTLIHGAGLVRN 297
RP+ +NI + +C+ G A + +EM+ RV+ P+L T +TLI G
Sbjct: 183 KLNLRPNTCIFNILVKHHCRNGDLQAAFEVVKEMKSARVS-YPNLVTYSTLIGGLCENGK 241
Query: 298 IHQARQLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A + F+EM K N+ PD YN +I+ + ++ A +++ M+ + Y
Sbjct: 242 LKEAIEFFEEMVSKDNILPDALTYNILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYS 301
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ G K L+ ++++ + P T + L+ C RVD L + D+
Sbjct: 302 VLMNGYCKEGRLQEAKEVFNEIKSLGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDK 361
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
++++ GLC GR++EA + +++ +++ SYR++ +L Q K
Sbjct: 362 DCRADTVTFNVMLGGLCREGRFDEALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKA 421
Query: 477 EDL 479
+L
Sbjct: 422 TEL 424
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/278 (18%), Positives = 123/278 (44%), Gaps = 4/278 (1%)
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEF 181
A+E++ ++ S L + S ++ + + +E +E F+ M + + +
Sbjct: 209 AFEVVKEMKSARVSYPNLVTYSTLIGGLCENGKLKEAIEFFEEMVSKDNILPDAL---TY 265
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L+ FC + ++ AR++ + S +PN ++L+ G+ + G + + ++E+
Sbjct: 266 NILINGFCQRGKVDRARTILEFMKSNGCSPNVFNYSVLMNGYCKEGRLQEAKEVFNEIKS 325
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G +P ++Y I+ C+ G +A L ++M+ C T ++ G +
Sbjct: 326 LGMKPDTISYTTLINCLCRTGRVDEATELLQQMKDKDCRADTVTFNVMLGGLCREGRFDE 385
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + ++P + G+Y +++ L + +L A EL+ M + + T +T+
Sbjct: 386 ALDMVQKLPFEGFYLNKGSYRIVLNFLTQKGELRKATELLGLMLNRGFVPHHATSNTLLL 445
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L + ++ + ++E F P+ + L+ C
Sbjct: 446 LLCNNGMVKDAVESLLGLLEMGFKPEHESWFTLVDLIC 483
>gi|226492629|ref|NP_001143148.1| uncharacterized protein LOC100275629 [Zea mays]
gi|195615066|gb|ACG29363.1| hypothetical protein [Zea mays]
Length = 478
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 108/440 (24%), Positives = 186/440 (42%), Gaps = 34/440 (7%)
Query: 67 TLVENVLGRLFAAHSNGLKALEFFK-----FTLQHPH-FTPTPDAFEKTLHILARMRYFD 120
TL + L RL A + +AL F + P TP+P LA +
Sbjct: 14 TLTADHLHRLVRAERDPRRALAIFDGATAAASTSAPDPITPSPATVSLLTSRLASAGHLP 73
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSR-ISKFQSYEETLEAFDRMEREIFVGIRKFGSE 179
A L+S + PS+ L+ + L R S+ L F ++ + +
Sbjct: 74 LATSLLSRSRGVFPSVAALEPPFLGLLRAFSRTHRPLAALHLFRSAPSDLAL---PHSAR 130
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N +L A + ARS+ + + FAP T N+LL D A + E
Sbjct: 131 SYNAVLAALVAHSHLPLARSLLADMRAAGFAPTAATYNVLLKA--HCSDAAA----HIED 184
Query: 239 VLRGFR----PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
LR FR P V +YN IDG C++G +A+ +F EM P++ T TT+IH
Sbjct: 185 ALRLFRNIPKPDVCSYNTIIDGLCRRGRLAEALDMFSEMVGKCIAPTVVTYTTVIHWLAR 244
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
A ++F EM +R + P++ Y+++I L + +A+EL+D M +++ + +T
Sbjct: 245 EGCFDDALKIFHEMGRRGVSPNLVTYSSLIDGLCKGGRATSALELLDRMVKEKKLPNTIT 304
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y ++ GL K L ++ DRM ++G+ P L+ C R N +
Sbjct: 305 YSSVIDGLCKEHMLSEAMEVLDRMRLQGR-KPDAGLFGKLIVGLCDAGRAVEAANYLDEM 363
Query: 414 IDRGFCP-------HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
+ G P H + ++T LC +G AF+ + R ++ +
Sbjct: 364 VLAGIEPNRVTWSLHARINNTVLTALCDKGELGRAFQVYQSTRTRSISTDPTTFHL---- 419
Query: 467 LVQANANEKLEDLDRMIKNL 486
LV++ + +E R++ ++
Sbjct: 420 LVESFSKNNIEKAARVVLDM 439
>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
Length = 602
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 128/267 (47%), Gaps = 2/267 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ F T + + +A V +++L +F P+ N L+ GF + + M +
Sbjct: 130 LIKGFFTLRNIPKAVRV-MEILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKD 188
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P VTYNI I C +G A+++ ++ C P++ T T LI L + +A
Sbjct: 189 FSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEAL 248
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L DEM R LKPD+ YN +I + + ++ A E++ +E K D ++Y+ + L
Sbjct: 249 KLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRAL 308
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ E KL +M K P T +L+ C + +++ +NL + ++G P
Sbjct: 309 LNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQML 449
++ D L+ C GR + A E + M+
Sbjct: 369 YSYDPLIAAFCREGRLDVAIEFLETMI 395
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 63/275 (22%), Positives = 125/275 (45%), Gaps = 4/275 (1%)
Query: 173 IRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
+ KFG + +N L+ FC + +A V ++ S+ F+P+ T NI++ G +
Sbjct: 150 LEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKL 209
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
++++ +P+V+TY I I+ +G +A++L +EM P + T T+
Sbjct: 210 DLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTI 269
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G + +A ++ + + +PD+ +YN ++ +L+ +LM +M ++
Sbjct: 270 IRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKC 329
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VTY + L + +E L M E P + L+ FC R+D+ +
Sbjct: 330 DPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIE 389
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+I G P + ++ LC G+ ++A E
Sbjct: 390 FLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 106/222 (47%), Gaps = 1/222 (0%)
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G + +++ L E M R P + T LI G +RNI +A ++ + + K +PD+
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
AYNA+I+ + ++ A ++D M K D VTY+ M L L+ K+ ++
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
++ P T +L++ + VD L L ++ RG P + ++ G+C G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ AFE + + ++ + SY +L R L+ E+ E L
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKL 320
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 132/323 (40%), Gaps = 41/323 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N +++ C + + A + L L P+ + NILL G E +M
Sbjct: 266 YNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMF 325
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRL------------------------------ 269
P+VVTY+I I C+ G +AM L
Sbjct: 326 SEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLD 385
Query: 270 -----FEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNA 322
E M CLP + T++ A L +N QA ++F ++ + P+ +YN
Sbjct: 386 VAIEFLETMISDGCLPDIVNYNTVL--ATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M S+L D A+ ++ EM I D +TY++M L + ++ +L M +
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T +++ FC R++ +N+ ++ G P+ +L+ G+ G EA
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAM 563
Query: 443 ECSKQMLVRRRQVSEASYRMLQR 465
E + LVR +SE S++ L R
Sbjct: 564 ELAND-LVRIDAISEYSFKRLHR 585
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 113/260 (43%), Gaps = 1/260 (0%)
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SG+ MV +G+ P V+ I G+ A+R+ E +E+ P +
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
LI+G + I A ++ D M ++ PD YN MI SL L+ A+++++++
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+TY + M G++ KL D M+ P T +++ C VD
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ L +G P + ++L+ L ++G+WEE + +M + + +Y +L
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340
Query: 465 RYLVQANANEKLEDLDRMIK 484
L + E+ +L +++K
Sbjct: 341 TTLCRDGKIEEAMNLLKLMK 360
>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
Length = 899
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 167/391 (42%), Gaps = 51/391 (13%)
Query: 120 DQAWELMSHV----QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR- 174
+QA+ +++H R + L ++L++++ Y ++ F + F +
Sbjct: 474 EQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVT----YTSLVDGFSKAGNTDFAAVLI 529
Query: 175 --------KFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKES 225
K S ++VLLQA C QK++ EA S+ ++ LS N I++ +
Sbjct: 530 EKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKE 589
Query: 226 GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI 285
G + ++EM+ G +PS TY + I YCK G +A L EMER P + T
Sbjct: 590 GKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTY 649
Query: 286 TTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI----------------SSLIR 329
I+G G + + +A M + +P+ Y ++ S +
Sbjct: 650 NVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWN 709
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+L+ +L++ M + + VTY ++ G K++ LE C L+D M P
Sbjct: 710 WIELDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEI 769
Query: 390 VVMLMKFFC--------VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
ML+K C V+F D+ I+ GF PH + L+ GLC G +++A
Sbjct: 770 YTMLIKCCCDIKLFGKAVSFVTDM--------IEFGFQPHLESYHYLIVGLCDEGDYDKA 821
Query: 442 FECSKQML-VRRRQVSEASYRMLQRYLVQAN 471
+L + +E ++++L L++A
Sbjct: 822 KSLFCDLLGMEDYNHNEVAWKILNDGLLKAG 852
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 109/464 (23%), Positives = 170/464 (36%), Gaps = 125/464 (26%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY---FDQAWELMSHVQRTHPSLLTLKSM 142
AL FF++ + P F T + L +LAR R +D+
Sbjct: 71 ALAFFEWVARRPGFRHTAASHAALLQLLARRRAPANYDK--------------------- 109
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE---------------------EF 181
+++S +S + E+ EA D ++ IR+ G + +
Sbjct: 110 -LVVSMVSCSDTAEDMREAVDAIQ-----AIRRVGGDLRKACWLLMMMPLMGCRRNEYSY 163
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVL 240
+L+Q C + ++EA + V ++ N T +L+ G + G + EM L
Sbjct: 164 TILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMPL 223
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC---------------------- 278
RG PSV TYN IDGYCK G DA+ + MER C
Sbjct: 224 RGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCGEKPDEA 283
Query: 279 ------------LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISS 326
P++ T T +I+G I A ++ M N K D+ AY +I+
Sbjct: 284 EELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINV 343
Query: 327 LI-RCR----------------------------------DLNAAMELMDEMEEKRIGHD 351
LI +CR + AA+E+ ME + +
Sbjct: 344 LIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPN 403
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWG 411
TY ++ +GL++ L L +M E P T L++ C D L+
Sbjct: 404 AWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFE 463
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
+ G P A ++L LC GR EEA+ LVR+ V
Sbjct: 464 MMEQNGLTPDEQAYNVLTHALCKSGRAEEAY----SFLVRKGVV 503
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 69/296 (23%), Positives = 126/296 (42%), Gaps = 16/296 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILL--LGFKESGDVTAMEM 233
F ++ +C + + +A V +LS +N+L+ FKE+ + +
Sbjct: 302 FTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVS--- 358
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
EM G P+VV Y IDGYCK G G A+ +F ME C P+ T ++LI+G
Sbjct: 359 ---EMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLI 415
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ +H+A L +M + + P + Y +I + + + A L + ME+ + D
Sbjct: 416 QDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 475
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
Y+ + L KS E + Y ++ V T L+ F D L +
Sbjct: 476 AYNVLTHALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKM 532
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ G + +L+ LC + + EA QM + + + +Y ++ +++
Sbjct: 533 VNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIK 588
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/405 (20%), Positives = 161/405 (39%), Gaps = 40/405 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTPT F ++ + D A + + + ++ L L++ ++++ + K ++E
Sbjct: 295 FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKL-DLQAYGVLINVLIKKCRFKEA 353
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
E E+F + ++ +C ++ A VF +L+ PN T +
Sbjct: 354 KETVS----EMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVF-RLMEHEGCRPNAWTYS 408
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + + +M G P V+TY I G CKK F +A RLFE ME+
Sbjct: 409 SLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 468
Query: 277 ACLPSLQ--------------------------------TITTLIHGAGLVRNIHQARQL 304
P Q T T+L+ G N A L
Sbjct: 469 GLTPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVL 528
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
++M K D Y+ ++ +L + + LN A+ ++D+M + + V Y + ++K
Sbjct: 529 IEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIK 588
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ +++ MI P T + + +C +++ +L G + G P
Sbjct: 589 EGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVT 648
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ + G G + AF K+M+ + + +Y +L ++ ++
Sbjct: 649 YNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLK 693
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/261 (22%), Positives = 100/261 (38%), Gaps = 32/261 (12%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMERE------IFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ ++ +S K EE MER+ + + G + +AF T K M
Sbjct: 613 TYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRM 672
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGF-----------KESGDVTAMEM-----FYHEM 238
+A PN T ILL F SG +E+ M
Sbjct: 673 IDASC---------EPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERM 723
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P+ VTY+ I G+CK +A LF+ M P+ + T LI ++
Sbjct: 724 VKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLF 783
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM-DEMEEKRIGHDNVTYHT 357
+A +M + +P + +Y+ +I L D + A L D + + H+ V +
Sbjct: 784 GKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKI 843
Query: 358 MFFGLMKSSGLEGVCKLYDRM 378
+ GL+K+ ++ +L M
Sbjct: 844 LNDGLLKAGHVDFCSQLLSAM 864
>gi|255660810|gb|ACU25574.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
Length = 418
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K + L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVIEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 130/309 (42%), Gaps = 4/309 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF JL + + L+ + ESG + Y
Sbjct: 31 EAKXLIQIVVSRKGKGSASAVFAAJLETKGTQISDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T I+ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYXQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEK 475
P + L+ GLC +G ++A + +M ++ + + +Y ++ + +
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETA 330
Query: 476 LEDLDRMIK 484
E RMIK
Sbjct: 331 FEYRKRMIK 339
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLXDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIKENIRLDXVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYXQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLXDEMSMKGLKPDKITYTTLIDGSCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDXVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYVPSV 416
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G E EM+ G +P + TY + I+ +CKKG +L +EM+R
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 278 CLPSLQT 284
+PS+ T
Sbjct: 412 YVPSVVT 418
>gi|242062226|ref|XP_002452402.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
gi|241932233|gb|EES05378.1| hypothetical protein SORBIDRAFT_04g025130 [Sorghum bicolor]
Length = 506
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 104/395 (26%), Positives = 181/395 (45%), Gaps = 23/395 (5%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPH-FTPTPDAFEKTLHILARMRYFDQA 122
L+S + +++L R + AL FF + ++ TP A + + +L +MR D+
Sbjct: 85 LTSGVADSLLRR---CGDDWKSALGFFLWAQSRGGGYSHTPCACNRMVDLLGKMRQIDRM 141
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
W+L+S + L+T+ +++ + R++ + + + + FD++E +G+ + +E N
Sbjct: 142 WDLLSEMH--CRGLVTVDTIAKSIRRLAAARRWRDAILLFDQLED---LGLER-NTETMN 195
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
VLL A C +++++ AR VFV L AP+ T NI + G+ + EM RG
Sbjct: 196 VLLDALCKERKVELAREVFVMLSPHIAPDAYTFNIFVHGWCSVRRIDEAMWTIEEMKNRG 255
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
F P V+TY ++ YCK+ F + + M C P++ T T ++ +A
Sbjct: 256 FPPIVITYTAVLEAYCKQRNFRRVYEILDSMSSQGCHPNVITYTMIMTSLTKCERFEEAL 315
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMFFG 361
+ D M KPD YNA+I+ L R L A ++ EM + + TY+TM
Sbjct: 316 SVSDRMKSSGCKPDTLFYNALINLLGRAGHLFEANQVFRVEMPRNVVPRNVATYNTMISI 375
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL--NLWGYLIDRGFC 419
L + + + M P +T L++ R G +L L DR
Sbjct: 376 LCQYGRDDDALDVLKEMEAQSCKPDLQTYQPLLRLL-FGRRGQTGAIHHLLSELRDR--- 431
Query: 420 PHGHALD-----LLVTGLCSRGRWEEAFECSKQML 449
+G LD LL+ GLC G + A++ +M+
Sbjct: 432 -NGLGLDLDTYTLLIHGLCRVGETDWAYQLYDEMV 465
>gi|255660804|gb|ACU25571.1| pentatricopeptide repeat-containing protein [Glandularia araucana]
Length = 418
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K + L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTXRKVIEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE + F FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLE-YGYPASLYF----------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 EDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 122/287 (42%), Gaps = 3/287 (1%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQISDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T I+ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTXRKVIEHLMKLKYFKLVWGFYEESLEYGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S +E +L+D M+ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMEDANELFDEMLNNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P + L+ GLC +G ++A + + +M ++ + + +Y L
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTL 317
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 120/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLEYGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + + A EL DEM + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMEDANELFDEMLNNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K E+
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMEDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLNNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYVPSV 416
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G E EM+ G +P + TY + I+ +CKKG +L +EM+R
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 278 CLPSLQT 284
+PS+ T
Sbjct: 412 YVPSVVT 418
>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
chloroplastic [Vitis vinifera]
Length = 1022
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 11/411 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F F ++ +P + +H L + D+A+ + + + TL + S++
Sbjct: 332 AIQLF-FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA-TLITYSVL 389
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
++ + K + + E + F +N L+ +C + +A + ++
Sbjct: 390 INGLMKLEKFNEANSVLKETLEKGFTP----NEVVYNTLIDGYCKMGNLGDALRIRGDMV 445
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
S+ PN+ T+N ++ GF + G + E EM+ RGF + + I C F
Sbjct: 446 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 505
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+R EM P+ +TTL+ G A +L+ + ++ ++ NA+I
Sbjct: 506 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 565
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A+ L+ +M E+ D +TY+T+ G K +E KL M++
Sbjct: 566 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 625
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T +L+ C ++D +NLW R P+ + +++ G C + EE +
Sbjct: 626 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 685
Query: 445 SKQMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDRMIKNLQAVLPPPT 494
++L + +++ Y L R Y N E + D M +PP T
Sbjct: 686 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM---RSKGIPPTT 733
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 110/227 (48%), Gaps = 1/227 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ C ++ EA +++ + SR PN T +++ G+ ++ + E + E++
Sbjct: 631 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 690
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + V YN I YC+ G +A +L ++M P+ T ++LIHG + +
Sbjct: 691 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 750
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ L DEM K L P++ Y A+I + ++ + ++ EM I + +TY M
Sbjct: 751 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 810
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
G KS ++ KL M+ VP T T +L FC +++ G
Sbjct: 811 DGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857
Score = 103 bits (258), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 157/372 (42%), Gaps = 18/372 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAW----ELMSHVQRTHPSLLTLKSMSIMLSRISKFQS 154
F+ P AF +H L F+ A E++ R + LLT ++ + K
Sbjct: 484 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT-----TLVGGLCKEGK 538
Query: 155 YEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
+ + +E + R+ + FG+ N L+ C M+EA + K+L R F +
Sbjct: 539 HSDAVELWFRLLE------KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 592
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N L+ G + G V EMV +G P TYN+ I G C+ G +A+ L+
Sbjct: 593 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 652
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
E + +P++ T +I G I + +LF E+ +NL+ + YN +I + R
Sbjct: 653 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 712
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A +L D+M K I TY ++ G+ +E L D M + +P
Sbjct: 713 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 772
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +C ++D +N+ + P+ +++ G G + A + +M+ +
Sbjct: 773 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832
Query: 452 RRQVSEASYRML 463
+Y +L
Sbjct: 833 GIVPDTVTYNVL 844
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 133/302 (44%), Gaps = 1/302 (0%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL + E++++ VF + +P+ + + F + G V + +M G
Sbjct: 285 LLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGV 344
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+VVTYN I G CK G +A R E+M + +L T + LI+G + ++A
Sbjct: 345 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 404
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ E ++ P+ YN +I + +L A+ + +M K I ++VT +++ G
Sbjct: 405 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 464
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K +E + + M+ F ++ + C+N R + L ++ R P+
Sbjct: 465 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 524
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLDRM 482
L LV GLC G+ +A E ++L + + + L L + N E + L +M
Sbjct: 525 LLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKM 584
Query: 483 IK 484
++
Sbjct: 585 LE 586
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 126/320 (39%), Gaps = 43/320 (13%)
Query: 171 VGIRKFGSEEFNVLLQAFCTQ---KEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESG 226
VG ++L+ +CTQ + A VF L ++ P KT LL ++
Sbjct: 234 VGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN 293
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
++ + E + +G P V ++ I+ +CK G DA+
Sbjct: 294 ELEK-SYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI------------------- 333
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
QLF +M K + P++ YN +I L + +L+ A ++M +
Sbjct: 334 ----------------QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 377
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ +TY + GLMK + +E F P L+ +C +
Sbjct: 378 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 437
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L + G ++ +G P+ L+ ++ G C G+ E+A ++ML R ++ ++ + +
Sbjct: 438 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 497
Query: 467 LVQANANEKLEDLDRMIKNL 486
L N + E R ++ +
Sbjct: 498 LCM---NSRFESALRFLREM 514
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 1/93 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C +M + +V ++ S PN T +++ G+ +SGD+ HEMV
Sbjct: 771 YTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMV 830
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+G P VTYN+ +G+CK+G + L E+
Sbjct: 831 GKGIVPDTVTYNVLTNGFCKEGKIEEGKLLAED 863
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 54/128 (42%), Gaps = 1/128 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C M++A+ + ++ PN L+ G+ + G + + EM
Sbjct: 736 YSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMS 795
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P+ +TY + IDGY K G A +L EM +P T L +G I
Sbjct: 796 SYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIE 855
Query: 300 QARQLFDE 307
+ + L ++
Sbjct: 856 EGKLLAED 863
>gi|255660936|gb|ACU25637.1| pentatricopeptide repeat-containing protein [Citharexylum
ligustrinum]
Length = 484
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 115/468 (24%), Positives = 195/468 (41%), Gaps = 64/468 (13%)
Query: 68 LVENVL-GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
LV NVL G + H AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVLHGSKKSEH-----ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCIL 68
Query: 127 SHVQRT----HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
+ + L L M+ K +E+++ F +ME +G+ + + ++
Sbjct: 69 LDMPKKGLEWDEDLWVL-----MIDSYGKAGIVQESVKLFQKMEE---LGVER-TIKSYD 119
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
VL + + A+ F K+LS P T NI++ GF SG V F+ +M R
Sbjct: 120 VLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSR 179
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P V+TYN I+GY + +A + F EM+ P++ T TTLI G V + A
Sbjct: 180 XITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTXTTLIKGYVSVDRVDDA 239
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFF 360
+L +EM +KP+ Y+ ++ L ++ A + EM +K I DN + +
Sbjct: 240 LRLXEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLIS 299
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG--- 417
G K+ L+ + MI + +L++ +C + D +NL LI++
Sbjct: 300 GQCKAGNLDAAADVLQAMIRLSVPTEAGHYGVLIENYCKAGQYDKAINLLDKLIEKDIIL 359
Query: 418 -------------------FCPHGH--------------------ALDLLVTGLCSRGRW 438
C +G AL+ L+ G G
Sbjct: 360 RPQSTLHMEXIAYNPLIEYLCNNGRTAKAETLVRQLMKLGVQDSIALNTLILGHSQEGSP 419
Query: 439 EEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
+ AFE K ML R+ ++++Y ++Q YL + + LD MI+N
Sbjct: 420 DSAFELLKIMLRRKIDSAKSAYDSLVQSYLKKNEPADAKAALDSMIEN 467
>gi|14488297|gb|AAK63878.1|AC074105_7 Putative salt-inducible protein [Oryza sativa]
gi|222612440|gb|EEE50572.1| hypothetical protein OsJ_30721 [Oryza sativa Japonica Group]
Length = 854
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/317 (27%), Positives = 143/317 (45%), Gaps = 9/317 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+A E +K T+ P+ + L DQA + ++ R + S +I
Sbjct: 455 EAFELYK-TMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVRM--GYCVIASFTI 511
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
L + L+ +D M+ VG++ F+ + C + EA + F+++
Sbjct: 512 YLDSSFRAGDVLGALKCWDDMK---IVGLQP-DFVAFSAYVNGLCRLDFLDEAYNGFIEM 567
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PNN T N L+ F +G+V+ +M G P + T NI IDG+C++G
Sbjct: 568 IRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGL 627
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A LF M + P + T T+++ ++I+ A ++M +PDI YN
Sbjct: 628 NTANNLFFGMYSIGLTPDVVTYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIW 687
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ SL LN AM L+DE+ ++VTY+T+ G+ S L+ L R+I+ F
Sbjct: 688 MHSLCSNHLLNRAMMLLDELAATDCAPNSVTYNTLMDGIC-SDVLDRAMILTGRLIKLAF 746
Query: 384 VPKTRTVVMLMKFFCVN 400
P T T+ +L FC N
Sbjct: 747 QPNTVTINILFSHFCKN 763
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 15/321 (4%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG- 177
D AWEL+ + ++ + +++ SK E FD E++ + K G
Sbjct: 418 LDDAWELLCSAIEKGVQV-SVSGFNALIAAYSK--------EGFDEEAFELYKTMNKLGL 468
Query: 178 ---SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEM 233
S N L+ C + + +AR +F++ + R + I L +GDV
Sbjct: 469 APSSSTLNYLIMGLCNRGRLDQAR-LFLEYMVRMGYCVIASFTIYLDSSFRAGDVLGALK 527
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ +M + G +P V ++ ++G C+ +A F EM R +P+ T +LI
Sbjct: 528 CWDDMKIVGLQPDFVAFSAYVNGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFC 587
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
N+ +A +L +M + L PDI N +I R LN A L M + D V
Sbjct: 588 RAGNVSEALKLEQKMRQSGLVPDIFTRNILIDGFCREGGLNTANNLFFGMYSIGLTPDVV 647
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+TM +S + G ++M+ P T + M C N ++ + L L
Sbjct: 648 TYNTMLNAYCRSKDINGAMIFMNKMLADGCEPDIFTYNIWMHSLCSNHLLNRAMMLLDEL 707
Query: 414 IDRGFCPHGHALDLLVTGLCS 434
P+ + L+ G+CS
Sbjct: 708 AATDCAPNSVTYNTLMDGICS 728
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 4/259 (1%)
Query: 193 EMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
E++ A VF ++ +R PN N ++ G G V M P +YN
Sbjct: 206 EVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACSYN 265
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I + G+C G DA LF+EM C P++ T L++ + +AR LFDEM +
Sbjct: 266 ILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQA 325
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
++ + +N +I + + A EM+ + D T++ + G K G +
Sbjct: 326 GVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYK-FGKAAL 384
Query: 372 CKLYDRMIEGKFVPKTRT--VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
L + + F + T + ML+ C + R+D L I++G + L+
Sbjct: 385 FVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGFNALI 444
Query: 430 TGLCSRGRWEEAFECSKQM 448
G EEAFE K M
Sbjct: 445 AAYSKEGFDEEAFELYKTM 463
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 23/251 (9%)
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G+V A + EM RG RP++ +N I G C +G + L M R +P +
Sbjct: 204 GGEVRAAWKVFEEMAARGPRPNLAIFNAMIFGLCHRGLVRVSGGLLGVMGRFHVVPDACS 263
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
L+ G L A LFDEM P I YN +++ L R + A L DEM
Sbjct: 264 YNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEML 323
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV- 403
+ + + +T++ + G K+ +E M +P C F +
Sbjct: 324 QAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPD-----------CCTFNIL 372
Query: 404 DLGLNLWG----YLIDR-------GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
G +G +++D+ G +D+L+ LC GR ++A+E + +
Sbjct: 373 SAGAYKFGKAALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAIEKG 432
Query: 453 RQVSEASYRML 463
QVS + + L
Sbjct: 433 VQVSVSGFNAL 443
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/244 (24%), Positives = 102/244 (41%), Gaps = 6/244 (2%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L++ C + ++A ++F ++ ++ P T NIL+ G + M + EM
Sbjct: 263 SYNILMKGHCLYGQAEDAFNLFDEMRVTGCCPTIVTYNILMNELCREGRMVEARMLFDEM 322
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA---GLV 295
+ G + +T+N+ IDGY K G +A EM+ + +P T L GA G
Sbjct: 323 LQAGVEVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTFNILSAGAYKFGKA 382
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+Q EM L D + +I L L+ A EL+ EK + +
Sbjct: 383 ALFVLDQQQLHEMFGSQLSTD--GIDMLICRLCWDGRLDDAWELLCSAIEKGVQVSVSGF 440
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + K E +LY M + P + T+ L+ C R+D Y++
Sbjct: 441 NALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLDQARLFLEYMVR 500
Query: 416 RGFC 419
G+C
Sbjct: 501 MGYC 504
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 85/382 (22%), Positives = 143/382 (37%), Gaps = 45/382 (11%)
Query: 99 FTPTPDAFEKTLHILARMRY--FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYE 156
F PDA + + Y + A+ L + R T+ + +I+++ + +
Sbjct: 255 FHVVPDACSYNILMKGHCLYGQAEDAFNLFDEM-RVTGCCPTIVTYNILMNELCREGRMV 313
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
E FD M + G+ + + FNVL+ + +M+ A ++ + P+ T
Sbjct: 314 EARMLFDEMLQ---AGV-EVNTITFNVLIDGYAKAGQMENANMACAEMKAMGLMPDCCTF 369
Query: 216 NILLLGFKESGDVTAM--------EMFYHEM----------------------------V 239
NIL G + G EMF ++ +
Sbjct: 370 NILSAGAYKFGKAALFVLDQQQLHEMFGSQLSTDGIDMLICRLCWDGRLDDAWELLCSAI 429
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + SV +N I Y K+G +A L++ M ++ PS T+ LI G +
Sbjct: 430 EKGVQVSVSGFNALIAAYSKEGFDEEAFELYKTMNKLGLAPSSSTLNYLIMGLCNRGRLD 489
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
QAR LF E R I ++ + S R D+ A++ D+M+ + D V +
Sbjct: 490 QAR-LFLEYMVRMGYCVIASFTIYLDSSFRAGDVLGALKCWDDMKIVGLQPDFVAFSAYV 548
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + L+ + MI VP T L+ FC V L L + G
Sbjct: 549 NGLCRLDFLDEAYNGFIEMIRRGLVPNNFTYNSLISAFCRAGNVSEALKLEQKMRQSGLV 608
Query: 420 PHGHALDLLVTGLCSRGRWEEA 441
P ++L+ G C G A
Sbjct: 609 PDIFTRNILIDGFCREGGLNTA 630
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 77/192 (40%), Gaps = 45/192 (23%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ A ++F+EM R +P++ +NAMI L
Sbjct: 207 VRAAWKVFEEMAARGPRPNLAIFNAMIFGLCH---------------------------- 238
Query: 358 MFFGLMK-SSGLEGVCKLYDRMIEGKF--VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
GL++ S GL GV G+F VP + +LMK C+ + + NL+ +
Sbjct: 239 --RGLVRVSGGLLGV--------MGRFHVVPDACSYNILMKGHCLYGQAEDAFNLFDEMR 288
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA---- 470
G CP ++L+ LC GR EA +ML +V+ ++ +L +A
Sbjct: 289 VTGCCPTIVTYNILMNELCREGRMVEARMLFDEMLQAGVEVNTITFNVLIDGYAKAGQME 348
Query: 471 NANEKLEDLDRM 482
NAN ++ M
Sbjct: 349 NANMACAEMKAM 360
>gi|255660946|gb|ACU25642.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 484
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 116/473 (24%), Positives = 198/473 (41%), Gaps = 58/473 (12%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HGAKNXEHALQFFRWVERSNLFEHNRETHHKIIEILGRASKLNHARCILL 69
Query: 128 HVQRTHPSLLTLKSMSIML-SRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
+ + L + + ++L K +E+++ F +ME +G+ + + ++ L +
Sbjct: 70 DMPKK--GLEWDEDLWVLLIDSYGKAGIVQESVKLFQKMEE---LGVER-TIKSYDALFK 123
Query: 187 AFCTQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ A+ F K+LS P T NI++ GF SG V F+ +M R P
Sbjct: 124 VILRRGRYMMAKRYFNKMLSEGNEPTRHTFNIMIWGFFLSGKVETANRFFEDMKSREIMP 183
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
VVTYN I GY + +A + F EM+ P++ T TTLI G V + A +L
Sbjct: 184 DVVTYNTMIXGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDALRLV 243
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMK 364
+EM +KP+ Y+ ++ L + ++ A ++ EM EK I DN + + G K
Sbjct: 244 EEMKGFGIKPNAITYSTLLPGLCNAQKMSEARSILKEMVEKYITPTDNSIFLRLISGQCK 303
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG------- 417
+ L+ + MI + +L++ +C + D + L LI++
Sbjct: 304 AGDLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDRLIEKDIILRPQS 363
Query: 418 ---------------FCPHGH--------------------ALDLLVTGLCSRGRWEEAF 442
C +G AL+ L+ G G + AF
Sbjct: 364 TLHLEPSAYNPLIEYLCNNGQTAKAESLVRQLMKLGVQDPTALNALIRGHSQEGSPDSAF 423
Query: 443 ECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
E K ML R+ + +++Y ++Q YL ++ + LD MI+N LP P
Sbjct: 424 ELLKIMLRRKARSEKSAYDSLVQSYLKKSEPADAKAALDSMIEN--GHLPDPA 474
>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
Length = 826
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/411 (22%), Positives = 176/411 (42%), Gaps = 11/411 (2%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A++ F F ++ +P + +H L + D+A+ + + + TL + S++
Sbjct: 265 AIQLF-FDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA-TLITYSVL 322
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
++ + K + + E + F +N L+ +C + +A + ++
Sbjct: 323 INGLMKLEKFNEANSVLKETLEKGFTP----NEVVYNTLIDGYCKMGNLGDALRIRGDMV 378
Query: 206 SR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
S+ PN+ T+N ++ GF + G + E EM+ RGF + + I C F
Sbjct: 379 SKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFE 438
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+R EM P+ +TTL+ G A +L+ + ++ ++ NA+I
Sbjct: 439 SALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALI 498
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + ++ A+ L+ +M E+ D +TY+T+ G K +E KL M++
Sbjct: 499 HGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIE 558
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T T +L+ C ++D +NLW R P+ + +++ G C + EE +
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKL 618
Query: 445 SKQMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDRMIKNLQAVLPPPT 494
++L + +++ Y L R Y N E + D M +PP T
Sbjct: 619 FTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDM---RSKGIPPTT 666
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 114/239 (47%), Gaps = 1/239 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+L+ C ++ EA +++ + SR PN T +++ G+ ++ + E + E++
Sbjct: 564 YNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELL 623
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ + V YN I YC+ G +A +L ++M P+ T ++LIHG + +
Sbjct: 624 TQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRME 683
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A+ L DEM K L P++ Y A+I + ++ + ++ EM I + +TY M
Sbjct: 684 DAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMI 743
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G KS ++ KL M+ VP T T +L FC +++ G + Y+ G
Sbjct: 744 DGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 98/416 (23%), Positives = 165/416 (39%), Gaps = 53/416 (12%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAW----ELMSHVQRTHPSLLTLKSMSIMLSRISKFQS 154
F+ P AF +H L F+ A E++ R + LLT ++ + K
Sbjct: 417 FSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT-----TLVGGLCKEGK 471
Query: 155 YEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
+ + +E + R+ + FG+ N L+ C M+EA + K+L R F +
Sbjct: 472 HSDAVELWFRLLE------KGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLD 525
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N L+ G + G V EMV +G P TYN+ I G C+ G +A+ L+
Sbjct: 526 KITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWN 585
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
E + +P++ T +I G I + +LF E+ +NL+ + YN +I + R
Sbjct: 586 ECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNG 645
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A +L D+M K I TY ++ G+ +E L D M + +P
Sbjct: 646 NTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYT 705
Query: 392 MLMKFFCVNFRVDLGLNLW--------------------GY---------------LIDR 416
L+ +C ++D +N+ GY ++ +
Sbjct: 706 ALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
G P ++L G C G+ EE F+ M + E +Y L Q +A
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGWQQPSA 821
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/260 (24%), Positives = 116/260 (44%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
LL + E++++ VF + +P+ + + F + G V + +M G
Sbjct: 218 LLSSLVKANELEKSYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGV 277
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+VVTYN I G CK G +A R E+M + +L T + LI+G + ++A
Sbjct: 278 SPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANS 337
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
+ E ++ P+ YN +I + +L A+ + +M K I ++VT +++ G
Sbjct: 338 VLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFC 397
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K +E + + M+ F ++ + C+N R + L ++ R P+
Sbjct: 398 KIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDG 457
Query: 424 ALDLLVTGLCSRGRWEEAFE 443
L LV GLC G+ +A E
Sbjct: 458 LLTTLVGGLCKEGKHSDAVE 477
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 114/269 (42%), Gaps = 8/269 (2%)
Query: 103 PDAFEKTL--HILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PD F L H + R+ D+A L + ++ + + + +M+ K EE
Sbjct: 559 PDTFTYNLLIHGMCRIGKLDEAVNLWNEC-KSRDLVPNVYTYGVMIDGYCKADKIEEG-- 615
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
+++ E+ + S +N L++A+C EA + + S+ P T + L+
Sbjct: 616 --EKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLI 673
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
G G + + EM G P+VV Y I GYCK G + + +EM
Sbjct: 674 HGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIH 733
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P+ T T +I G ++ A +L EM + + PD YN + + + + ++
Sbjct: 734 PNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKI 793
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
D M ++ + D +TY T+ G + S L
Sbjct: 794 CDYMSQEGLPLDEITYTTLVHGWQQPSAL 822
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/320 (20%), Positives = 126/320 (39%), Gaps = 43/320 (13%)
Query: 171 VGIRKFGSEEFNVLLQAFCTQ---KEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESG 226
VG ++L+ +CTQ + A VF L ++ P KT LL ++
Sbjct: 167 VGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKAN 226
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
++ + E + +G P V ++ I+ +CK G DA+
Sbjct: 227 ELEK-SYWVFETMRQGVSPDVYLFSTAINAFCKGGKVEDAI------------------- 266
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
QLF +M K + P++ YN +I L + +L+ A ++M +
Sbjct: 267 ----------------QLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKD 310
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ +TY + GLMK + +E F P L+ +C +
Sbjct: 311 GVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDA 370
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L + G ++ +G P+ L+ ++ G C G+ E+A ++ML R ++ ++ + +
Sbjct: 371 LRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHW 430
Query: 467 LVQANANEKLEDLDRMIKNL 486
L N + E R ++ +
Sbjct: 431 LCM---NSRFESALRFLREM 447
>gi|334183891|ref|NP_177483.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|193806278|sp|Q9FX35.2|PP117_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
At1g73400, mitochondrial; Flags: Precursor
gi|332197336|gb|AEE35457.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 568
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/393 (23%), Positives = 166/393 (42%), Gaps = 22/393 (5%)
Query: 60 QTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYF 119
+ L++ +V +L RL A FF + H++ P A+ + + IL+ +Y
Sbjct: 119 SSVDLTTPVVCKILQRLQYEEKT---AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYK 175
Query: 120 DQAW----ELMSHVQRTHPSLLTLKSMSIMLSRISKF-QSYEETLEAFDRMEREIFVGIR 174
++ + +++ +++R + +++ + ++L + K+ + Y ++ F + +R IR
Sbjct: 176 NKQFRIVIDMLDYMKRNNKTVVLV---DVLLEILRKYCERYLTHVQKFAKRKR-----IR 227
Query: 175 KFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAM 231
E FN+LL A C +KE ++ ++ R P+ T N+L G+ D
Sbjct: 228 VKTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKA 287
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---ERVACLPSLQTITTL 288
EM+ G +P TY ID +C+ G +A LF+ M P+ +T +
Sbjct: 288 MKLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALM 347
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I + +L M PD+ Y +I + ++ A + +DEM K
Sbjct: 348 IVALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGY 407
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D VTY+ L ++ + KLY RM+E + P +T ML+ F D N
Sbjct: 408 PPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFN 467
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
W + R ++ GL R +EA
Sbjct: 468 TWTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 500
Score = 46.6 bits (109), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T K+ ++M+ ++K EE E RM I G S + +++ C +++ EA
Sbjct: 340 TAKTFALMIVALAKNDKAEECFELIGRM---ISTGCLPDVST-YKDVIEGMCMAEKVDEA 395
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ ++ + P+ T N L E+ Y MV PSV TYN+ I
Sbjct: 396 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 455
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ + A + EM++ C+ ++T +I+G +A L +E+ + LK
Sbjct: 456 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 515
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+++ + L +L A ++ + M++
Sbjct: 516 YRVFDSFLMRLSEVGNLKAIHKVSEHMKK 544
>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
Length = 577
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 90/374 (24%), Positives = 162/374 (43%), Gaps = 11/374 (2%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPT + L+ L +M ++A +L+ + P ++T S+ I +
Sbjct: 18 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL------IDGLGKEKR 71
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ EA+ ++ +E+ + + + L++ ++ +A SV+ + S P+ T++
Sbjct: 72 SFEAY-KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 130
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G ++G + A + M RG P+ V Y+ I G CK A+ + +M++
Sbjct: 131 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 190
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P T LI G ++ AR FDEM + KPD+ YN +IS + + +AA
Sbjct: 191 FCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 250
Query: 337 M-ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
L E D TY + L K+ +E L +++ P T L+
Sbjct: 251 SHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLN 310
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C R++ ++L ++D G P L+ GL R EA++ K+M +R +
Sbjct: 311 GLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLAL 370
Query: 456 SEASYRMLQRYLVQ 469
Y L R L+Q
Sbjct: 371 DTVCYTALIRELLQ 384
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 119/263 (45%), Gaps = 3/263 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
+N LL C ++EA + K++ P+ T L+ G KE A ++F EM
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF-KEM 363
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
LRG V Y I + G A +++ M C+P + T++T+I G I
Sbjct: 364 ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 423
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A ++F M R L P+ Y+A+I L + R ++ A+E++ +M++ D +TY+ +
Sbjct: 424 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 483
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL KS +E +D M+E P T +L+ FC D ++ +
Sbjct: 484 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRC 543
Query: 419 CPHGHALDLLVTGLCSRGRWEEA 441
+ L++GLC R + +A
Sbjct: 544 SANVVTYGALISGLCKRRQLTKA 566
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 93/404 (23%), Positives = 168/404 (41%), Gaps = 28/404 (6%)
Query: 48 QPLHPTLLQH--LPQTTPLSSTLVENV--LGRLFAAHSNGLKALEFFKFTLQHPHFTPTP 103
++ T+ H +P LS T+++ + GR+ AA + FK +++ P
Sbjct: 111 SSVYKTMTSHGCVPDVVTLS-TMIDGLSKAGRIGAA-------VRIFK-SMEARGLAPNE 161
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ +H L + R D A E+++ +++ + T+ + ++++ + K E FD
Sbjct: 162 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI-TYNVLIDGLCKSGDVEAARAFFD 220
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI-----L 218
M + G K +N+L+ FC A L N T++I +
Sbjct: 221 EM---LEAGC-KPDVYTYNILISGFCKAGNTDAASH---SLAQETTINGCTIDIHTYTAI 273
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ ++ + ++ G P++ TYN ++G CK G +A+ L ++ C
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P + T T+LI G G + +A +LF EM R L D Y A+I L++ + A
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ M D VT TM GL K+ + +++ M P L+ C
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453
Query: 399 VNFRVDLGLNLWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEA 441
++D L + + + FC P ++L+ GLC G E A
Sbjct: 454 KARKMDCALEMLAQM-KKAFCTPDTITYNILIDGLCKSGDVEAA 496
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 10/268 (3%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TPT + L+ L +M ++A +L+ + P ++T S+ I +
Sbjct: 299 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSL------IDGLGKEKR 352
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+ EA+ ++ +E+ + + + L++ ++ +A SV+ + S P+ T++
Sbjct: 353 SFEAY-KLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLS 411
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
++ G ++G + A + M RG P+ V Y+ I G CK A+ + +M++
Sbjct: 412 TMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKA 471
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
C P T LI G ++ AR FDEM + KPD+ YN +IS + + +AA
Sbjct: 472 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 531
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMK 364
+ D+M R + VTY + GL K
Sbjct: 532 CGVFDDMSSSRCSANVVTYGALISGLCK 559
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 120/289 (41%), Gaps = 10/289 (3%)
Query: 113 LARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
LA+ + ++A LM + P++ T ++ L ++ + + EA D + + +
Sbjct: 277 LAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLE------EAIDLLRKIVD 330
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
G + L+ +K EA +F ++ R A + L+ ++G +
Sbjct: 331 NGCTP-DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIP 389
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
Y M G P VVT + IDG K G G A+R+F+ ME P+ + LI
Sbjct: 390 QASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 449
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
HG R + A ++ +M K PD YN +I L + D+ AA DEM E
Sbjct: 450 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 509
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
D TY+ + G K+ + C ++D M + T L+ C
Sbjct: 510 PDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLC 558
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 2/207 (0%)
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
++ G P++ TYN ++G CK G +A+ L ++ C P + T T+LI G G
Sbjct: 10 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 69
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A +LF EM R L D Y A+I L++ + A + M D VT
Sbjct: 70 KRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTL 129
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
TM GL K+ + +++ M P L+ C ++D L + +
Sbjct: 130 STMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQM-K 188
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEEA 441
+ FC P ++L+ GLC G E A
Sbjct: 189 KAFCTPDTITYNVLIDGLCKSGDVEAA 215
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 79/184 (42%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ L E++ C P++ T L++G + + +A L ++ PD+ Y ++I
Sbjct: 4 EAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLI 63
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + + A +L EM + + D V Y + L+++ + +Y M V
Sbjct: 64 DGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCV 123
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T+ ++ R+ + ++ + RG P+ L+ GLC + + A E
Sbjct: 124 PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEM 183
Query: 445 SKQM 448
QM
Sbjct: 184 LAQM 187
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 69/173 (39%)
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
I +A L +++ P I YNA+++ L + L A++L+ ++ + D VTY +
Sbjct: 2 IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 61
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL K KL+ M T L++ ++ +++ + G
Sbjct: 62 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 121
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
P L ++ GL GR A K M R +E Y L L +A
Sbjct: 122 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 174
>gi|297828902|ref|XP_002882333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297328173|gb|EFH58592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 506
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 151/337 (44%), Gaps = 16/337 (4%)
Query: 29 QSSEIERITRII----NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
+SS+ E I +I D D + LS LV +L R + L
Sbjct: 44 ESSQSEEIWNVIVGRDGDRDSEDDVFKRLSNDEICNRVNLSDGLVYKLLHRFRDDWKSAL 103
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH-PSLLTLKSMS 143
L + + H H + DA++ + IL + + +D+ L V+R L+TL +++
Sbjct: 104 GVLNWAESCKGHKH---SNDAYDMAVDILGKAKKWDR---LKVFVERMRGDKLVTLNTIA 157
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ R + +EE + FD++ G+ K +E N+LL C +K +++AR V ++
Sbjct: 158 KIMRRFAGAGEWEEAVGIFDKLGE---FGLEK-NTESMNLLLDTLCKEKRVEQARVVLLE 213
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L S PN T NI + G+ ++ V EM GFRP V++Y I YC++ F
Sbjct: 214 LKSHITPNAHTFNIFIHGWCKANRVEEALWTIQEMKGHGFRPCVISYTTIIRCYCQQSEF 273
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+ EME P+ T TT++ + +A ++ M + +PD YN +
Sbjct: 274 VKVYEMLSEMEANGSPPNSITYTTIMSSLNAQKEFEEALRVATRMKRSGCQPDSLFYNCL 333
Query: 324 ISSLIRCRDLNAAMELMD-EMEEKRIGHDNVTYHTMF 359
I +L R L A + EM E + + TY++M
Sbjct: 334 IHTLARSGRLEEAERVFRVEMPELGVSINTSTYNSMI 370
>gi|11120809|gb|AAG30989.1|AC012396_25 hypothetical protein [Arabidopsis thaliana]
Length = 466
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/392 (23%), Positives = 166/392 (42%), Gaps = 22/392 (5%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
+ L++ +V +L RL A FF + H++ P A+ + + IL+ +Y +
Sbjct: 18 SVDLTTPVVCKILQRLQYEEKT---AFRFFTWAGHQEHYSHEPIAYNEMIDILSSTKYKN 74
Query: 121 QAW----ELMSHVQRTHPSLLTLKSMSIMLSRISKF-QSYEETLEAFDRMEREIFVGIRK 175
+ + +++ +++R + +++ + ++L + K+ + Y ++ F + +R IR
Sbjct: 75 KQFRIVIDMLDYMKRNNKTVVLV---DVLLEILRKYCERYLTHVQKFAKRKR-----IRV 126
Query: 176 FGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAME 232
E FN+LL A C +KE ++ ++ R P+ T N+L G+ D
Sbjct: 127 KTQPEINAFNMLLDALCKCGLVKEGEALLRRMRHRVKPDANTFNVLFFGWCRVRDPKKAM 186
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---ERVACLPSLQTITTLI 289
EM+ G +P TY ID +C+ G +A LF+ M P+ +T +I
Sbjct: 187 KLLEEMIEAGHKPENFTYCAAIDTFCQAGMVDEAADLFDFMITKGSAVSAPTAKTFALMI 246
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ +L M PD+ Y +I + ++ A + +DEM K
Sbjct: 247 VALAKNDKAEECFELIGRMISTGCLPDVSTYKDVIEGMCMAEKVDEAYKFLDEMSNKGYP 306
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D VTY+ L ++ + KLY RM+E + P +T ML+ F D N
Sbjct: 307 PDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISMFFEMDDPDGAFNT 366
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
W + R ++ GL R +EA
Sbjct: 367 WTEMDKRDCVQDVETYCAMINGLFDCHRAKEA 398
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/209 (22%), Positives = 91/209 (43%), Gaps = 5/209 (2%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T K+ ++M+ ++K EE E RM I G S + +++ C +++ EA
Sbjct: 238 TAKTFALMIVALAKNDKAEECFELIGRM---ISTGCLPDVST-YKDVIEGMCMAEKVDEA 293
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ ++ + P+ T N L E+ Y MV PSV TYN+ I
Sbjct: 294 YKFLDEMSNKGYPPDIVTYNCFLRVLCENRKTDEALKLYGRMVESRCAPSVQTYNMLISM 353
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+ + A + EM++ C+ ++T +I+G +A L +E+ + LK
Sbjct: 354 FFEMDDPDGAFNTWTEMDKRDCVQDVETYCAMINGLFDCHRAKEACFLLEEVVNKGLKLP 413
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+++ + L +L A ++ + M++
Sbjct: 414 YRVFDSFLMRLSEVGNLKAIHKVSEHMKK 442
>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At1g74580
gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 763
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/351 (25%), Positives = 155/351 (44%), Gaps = 12/351 (3%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ F L I L + D A ++ + Q P ++T ++ L + SKFQ E
Sbjct: 249 PNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVY 308
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNI 217
L +M E G+ S +N L+ +C ++ A R V + + F P+ T
Sbjct: 309 L---GKMVNE---GLEP-DSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRS 361
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G G+ ++E + +G +P+V+ YN I G +G +A +L EM
Sbjct: 362 LIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKG 421
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
+P +QT L++G + + A L M + PDI +N +I + A+
Sbjct: 422 LIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENAL 481
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
E++D M + + D TY+++ GL K+S E V + Y M+E P T +L++
Sbjct: 482 EILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESL 541
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
C ++D L L + ++ P L+ G C G + A+ ++M
Sbjct: 542 CRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKM 592
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 148/324 (45%), Gaps = 24/324 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L++ Q + EA + ++ + P +T NIL+ G + G V+ + M+
Sbjct: 394 YNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMI 453
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G+ P + T+NI I GY + +A+ + + M P + T +L++G
Sbjct: 454 SKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFE 513
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + M ++ P++ +N ++ SL R R L+ A+ L++EM+ K + D VT+ T+
Sbjct: 514 DVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLI 573
Query: 360 FGLMKSSGLEGVCKLYDRMIEG-KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K+ L+G L+ +M E K T T +++ F V + L+ ++DR
Sbjct: 574 DGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCL 633
Query: 419 CPHGHALDLLVTGLCSRGR-----------WEEAFECSKQMLVR-------RRQVSEAS- 459
P G+ L+V G C G E F S L R +V EA+
Sbjct: 634 GPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAG 693
Query: 460 --YRMLQRYLVQANANEKLEDLDR 481
+RM+Q+ LV N + D+D+
Sbjct: 694 IIHRMVQKGLVPEAVN-TICDVDK 716
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 122/270 (45%), Gaps = 1/270 (0%)
Query: 181 FNVLLQAFCTQKEMKEA-RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+ +Q C + E+ A R V + P+ T N L+ G ++ E++ +MV
Sbjct: 254 YNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P TYN I GYCK G A R+ + +P T +LI G +
Sbjct: 314 NEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETN 373
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A LF+E + +KP++ YN +I L + A +L +EM EK + + T++ +
Sbjct: 374 RALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + L MI + P T +L+ + +++ L + ++D G
Sbjct: 434 NGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVD 493
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + + L+ GLC ++E+ E K M+
Sbjct: 494 PDVYTYNSLLNGLCKTSKFEDVMETYKTMV 523
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/365 (19%), Positives = 143/365 (39%), Gaps = 15/365 (4%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
+KALE F + F T + + L F+ E++ ++ + +
Sbjct: 21 MKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVYV 80
Query: 144 IMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ + +E + F+RM E +F +N ++ +A
Sbjct: 81 GAMKNYGRKGKVQEAVNVFERMDFYDCEPTVF---------SYNAIMSVLVDSGYFDQAH 131
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
V++++ R P+ + I + F ++ A + M +G +VV Y + G+
Sbjct: 132 KVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGF 191
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
++ + LF +M L T L+ ++ + +L D++ KR + P++
Sbjct: 192 YEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNL 251
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
YN I L + +L+ A+ ++ + E+ D +TY+ + +GL K+S + +
Sbjct: 252 FTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGK 311
Query: 378 MIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
M+ P + T L+ +C V L + G + GF P L+ GLC G
Sbjct: 312 MVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGE 371
Query: 438 WEEAF 442
A
Sbjct: 372 TNRAL 376
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/248 (23%), Positives = 108/248 (43%), Gaps = 15/248 (6%)
Query: 76 LFAAHSNGLK---ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--Q 130
L +S LK ALE L + P + L+ L + F+ E + +
Sbjct: 467 LIHGYSTQLKMENALEILDVMLDN-GVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
P+L T +I+L + +++ +E L + M+ + + F L+ FC
Sbjct: 526 GCAPNLFTF---NILLESLCRYRKLDEALGLLEEMKNKSV----NPDAVTFGTLIDGFCK 578
Query: 191 QKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++ A ++F K+ + + + T NI++ F E +VT E + EMV R P
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY + +DG+CK G + EM +PSL T+ +I+ + +++A + M
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698
Query: 309 PKRNLKPD 316
++ L P+
Sbjct: 699 VQKGLVPE 706
>gi|357143144|ref|XP_003572818.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Brachypodium distachyon]
Length = 496
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 125/266 (46%), Gaps = 6/266 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
FN LL A + +A S+ L RF P+ T N L G+ D + +M
Sbjct: 173 FNSLLDALGKSRHASKAASLVRALERRFPPDVVTYNTLADGWCRVKDTSRALDLLRQMAE 232
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA-----CLPSLQTITTLIHGAGLV 295
G P+ TYN+ + G+ + G A F +M++ C P + + TT+IHG G+
Sbjct: 233 SGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSKDENCKPDVVSYTTIIHGLGVA 292
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +AR+LFDEM K P I YNA+I + + ++ A+ + D+M K + VTY
Sbjct: 293 GQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVEDAVTVFDDMIRKDYIPNVVTY 352
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ GL ++ KL +RM P +T +L+++ +D L+L+ +
Sbjct: 353 TVLIRGLCHVGKIDRAMKLMERMKNEGCEPVVQTYNVLIRYSFEEGEMDKALHLFERMSK 412
Query: 416 RGFC-PHGHALDLLVTGLCSRGRWEE 440
C P+ +++++ + R R E+
Sbjct: 413 GEECLPNQDTYNIVISAMFVRKRAED 438
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/226 (20%), Positives = 91/226 (40%), Gaps = 7/226 (3%)
Query: 266 AMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A+RLF + R L +L+ G R+ +A L + +R PD+ YN +
Sbjct: 153 AVRLFLSLHRSHRVAQDLPLFNSLLDALGKSRHASKAASLVRAL-ERRFPPDVVTYNTLA 211
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI----- 379
R +D + A++L+ +M E I TY+ + G ++ L+ + +M
Sbjct: 212 DGWCRVKDTSRALDLLRQMAESGIAPTKTTYNVILKGFFRAGQLQHAWNFFLQMKKRGSK 271
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P + ++ V ++D L+ + G P + L+ +C +G E
Sbjct: 272 DENCKPDVVSYTTIIHGLGVAGQLDKARKLFDEMSKEGCPPTIATYNALIQVICKKGNVE 331
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
+A M+ + + +Y +L R L ++ L +KN
Sbjct: 332 DAVTVFDDMIRKDYIPNVVTYTVLIRGLCHVGKIDRAMKLMERMKN 377
>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09820-like [Brachypodium distachyon]
Length = 571
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 98/452 (21%), Positives = 189/452 (41%), Gaps = 31/452 (6%)
Query: 43 HPFPDQPLH--PTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHF 99
H LH ++++ LP + SS L+ ++L A+ S L + E F HP
Sbjct: 90 HALAAARLHSPASIVRALPAS---SSPLIADLLVLALASASQPLASYEAFLLAGDAHPRH 146
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P+ + + L L D A +R P L T +I++S + K
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTF---NIVISGLCKTGQL-- 201
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLL------SR 207
R ++ IR +G +N ++ +C K + R V L +
Sbjct: 202 ------RKAGDVAKDIRAWGLAPSVVTYNTIIDGYC--KRGRAGRMYHVDALLKEMVEAG 253
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+PN T N+L+ G+ + + A + EM +G SVVTY+ + G C +G + +
Sbjct: 254 ISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGV 313
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
+L +EM+ + +P+L T+ ++++G + A D M ++N+KP++ Y ++
Sbjct: 314 KLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGY 373
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R + A+ + + M K + + Y+ + G ++ V L D M
Sbjct: 374 RRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADI 433
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +L+ CV V + L ++ G P + ++ G C +G + A+E +
Sbjct: 434 VTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTR 493
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
M +++ + +Y + + L + E+ +L
Sbjct: 494 MEKGKKRANVVTYNVFIKCLCRMGKMEETNEL 525
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/275 (26%), Positives = 132/275 (48%), Gaps = 15/275 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFY 235
++ L+ C++ +++E VKL+ PN T+N +L GF + G +T E +
Sbjct: 296 YSALVWGLCSEGKVEEG----VKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWI 351
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M + +P+VVTY I +DGY + DA+ + E M P+ + LI AG
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLI--AGFT 409
Query: 296 RN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
RN L DEM + ++ DI YN +I +L ++ A++L+DEM + ++
Sbjct: 410 RNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHL 469
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ G + ++ ++ RM +GK T + +K C +++ L +
Sbjct: 470 TYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEM 529
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEE--AFECSK 446
+++G P+G D + G+ +G + F CS+
Sbjct: 530 LEKGLVPNGVTYDTIKEGMMEKGYTPDVRGFTCSE 564
>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
Length = 817
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 92/390 (23%), Positives = 164/390 (42%), Gaps = 11/390 (2%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA + FK +Q P + +H L + R D+A + + +R P+ T ++
Sbjct: 240 KACDLFKEMVQR-GIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+ S ++E + F M R + ++L+ + C ++KEAR VF
Sbjct: 299 ---IYGYSSTGQWKEAVRVFKEMRRHSILP----DVVTLSMLMGSLCKYGKIKEARDVFD 351
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+ + P+ + NI+L G+ G + M + M+ G P T+N+ I Y G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
AM +F EM P + T T+I + + A + F++M + + PD AYN
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+I L A EL+ E+ + D V + ++ L K + ++D +
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNV 531
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P MLM +C+ +++ L ++ ++ G P+ LV G C GR +E
Sbjct: 532 GLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEG 591
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++ML R + S Y ++ L +A
Sbjct: 592 LSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 15/313 (4%)
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER-----EIFVGIRKFGSEEFNVLL 185
R H L + ++S+++ + K+ +E + FD M ++F +N++L
Sbjct: 319 RRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF---------SYNIML 369
Query: 186 QAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
+ T+ + + +F +L AP+ T N+L+ + G + + ++EM G +
Sbjct: 370 NGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVK 429
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P VVTY I C+ G DAM F +M P LI G ++ +A++L
Sbjct: 430 PDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKEL 489
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
E+ + DI ++++I++L + + A + D + D V Y+ + G
Sbjct: 490 ISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCL 549
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+E +++D M+ P L+ +C R+D GL+L+ ++ RG P
Sbjct: 550 VGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTIL 609
Query: 425 LDLLVTGLCSRGR 437
+++ GL GR
Sbjct: 610 YSIIIDGLFEAGR 622
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 3/286 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA---PNNKTMNILLLGFKESGDVTAMEMFYHE 237
+++LL++ C Q + +A + + A PN N ++ GF + GDV + E
Sbjct: 188 YSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKE 247
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV RG P +VTYN + CK A +M LP+ T LI+G
Sbjct: 248 MVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQ 307
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+A ++F EM + ++ PD+ + ++ SL + + A ++ D M K D +Y+
Sbjct: 308 WKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI 367
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M G L + L+D M+ P T +L+K + +D + ++ + D G
Sbjct: 368 MLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHG 427
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P ++ LC G+ ++A E QM+ + + +Y L
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 122/258 (47%), Gaps = 5/258 (1%)
Query: 184 LLQAFCTQKEMKE-ARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT-AMEMFYHEMVL 240
+L CT+ E A + F +LL + N N LL GF E+ A+++ H
Sbjct: 119 ILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPE 178
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER--VACLPSLQTITTLIHGAGLVRNI 298
G P V +Y+I + C +G G A L M C P++ T+I G ++
Sbjct: 179 LGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDV 238
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
++A LF EM +R + PD+ YN+++ +L + R ++ A + +M KR+ +N TY+ +
Sbjct: 239 NKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+G + + +++ M +P T+ MLM C ++ +++ + +G
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358
Query: 419 CPHGHALDLLVTGLCSRG 436
P + ++++ G ++G
Sbjct: 359 NPDVFSYNIMLNGYATKG 376
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/395 (23%), Positives = 166/395 (42%), Gaps = 59/395 (14%)
Query: 102 TPD--AFEKTLHILARMRYFDQAWELMSHVQRTH---PSLLTLKSMSIMLSRISKFQSYE 156
PD F + A D+A + + + R H P ++T +++ L RI K +
Sbjct: 394 APDFYTFNVLIKAYANCGMLDKAMIIFNEM-RDHGVKPDVVTYRTVIAALCRIGKM---D 449
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMN 216
+ +E F++M + V K+ +N L+Q FCT + +A+ +L+S N ++
Sbjct: 450 DAMEKFNQMIDQ-GVAPDKYA---YNCLIQGFCTHGSLLKAK----ELISEIMNNGMHLD 501
Query: 217 ILLLG-----FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
I+ + G V + + V G P V YN+ +DGYC G A+R+F+
Sbjct: 502 IVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFD 561
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC- 330
M P++ TL++G + I + LF EM +R +KP Y+ +I L
Sbjct: 562 AMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAG 621
Query: 331 RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTV 390
R + A M+ EM E I D TY+ + GL K+ + +D I
Sbjct: 622 RTVPAKMKF-HEMTESGIAMDICTYNIVLRGLFKN-------RCFDEAI----------- 662
Query: 391 VMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLV 450
+ + +N ++++ L+ ++ G+ R EEA + +
Sbjct: 663 FLFKELRAMNVKINI-----------------ITLNTMIDGMFQTRRVEEAKDLFASISR 705
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKN 485
R S +Y ++ L++ E+ ED+ ++N
Sbjct: 706 SRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQN 740
>gi|255660808|gb|ACU25573.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 418
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K J L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVJEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNXMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNXMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYVPSV 416
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G E EM+ G +P + TY + I+ +CKKG +L +EM+R
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 278 CLPSLQT 284
+PS+ T
Sbjct: 412 YVPSVVT 418
>gi|224069254|ref|XP_002302938.1| predicted protein [Populus trichocarpa]
gi|222844664|gb|EEE82211.1| predicted protein [Populus trichocarpa]
Length = 599
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 94/394 (23%), Positives = 167/394 (42%), Gaps = 21/394 (5%)
Query: 87 LEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV---------QRTHPSLL 137
L FF F +P F+ T ++ +H L R QA L+ V S+L
Sbjct: 94 LSFFDFLSSYPTFSHTVQSYCSMVHFLIAHRMNQQAESLLHFVVSRKGKGSASSVFASIL 153
Query: 138 TLKS-------MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
K ++S ++F + ++ F R+ ++ + I G + LL+
Sbjct: 154 ETKGTLSSSFVFDALMSVYTEFGYVSDAIQCF-RLTKKHNLKIPFNGCK---CLLERMIK 209
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
A ++++L S + PN T N+L+ + G V ++ + E+ G +P+ V+
Sbjct: 210 MSSPMVALEFYLEILDSGYPPNVYTFNVLMNRLCKEGKVKDAQLIFDEIRKTGLQPTAVS 269
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
+N I+GYCK G + RL ME P + T + LI G + A LF EM
Sbjct: 270 FNTLINGYCKSGNLEEGFRLKMVMEEFRVFPDVFTYSALIDGLCKECQLEDANHLFKEMC 329
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
R L P+ + +I+ + ++ A+E+ +M K + D V Y+T+ GL K
Sbjct: 330 DRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMFTKGLKADLVLYNTLIDGLCKGGYFR 389
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
K M + +P T L+ C ++L L + ++ G A ++
Sbjct: 390 EARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLELALEMRKEMVKEGIQLDNVAFTAII 449
Query: 430 TGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+GLC G+ +A ++ML + + +Y M+
Sbjct: 450 SGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMV 483
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 137/297 (46%), Gaps = 6/297 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + ++++A +F ++ R PN+ T L+ G ++G V Y +M
Sbjct: 305 YSALIDGLCKECQLEDANHLFKEMCDRGLVPNDVTFTTLINGQCKNGRVDLALEIYQQMF 364
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G + +V YN IDG CK G F +A + EM + +P T TTL+ G+ ++
Sbjct: 365 TKGLKADLVLYNTLIDGLCKGGYFREARKFVGEMTKRGLIPDKFTYTTLLDGSCKEGDLE 424
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ EM K ++ D A+ A+IS L R + A + EM + D+ TY +
Sbjct: 425 LALEMRKEMVKEGIQLDNVAFTAIISGLCRDGKIVDAERTLREMLRAGLKPDDGTYTMVM 484
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K ++ KL M +P T +LM C +V L +++ G
Sbjct: 485 DGFCKKGDVKMGFKLLKEMQSDGHIPGVITYNVLMNGLCKQGQVKNADMLLNAMLNLGVV 544
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE-ASYRMLQRYLVQANANEK 475
P ++L+ G C G+ + +M + VS+ ASYR L L +A+ + +
Sbjct: 545 PDDITYNILLQGHCKHGKLGDFQNVKTEMGL----VSDYASYRSLLHELSKASKDRQ 597
>gi|356544600|ref|XP_003540737.1| PREDICTED: pentatricopeptide repeat-containing protein At1g07740,
mitochondrial-like [Glycine max]
Length = 449
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 100/377 (26%), Positives = 165/377 (43%), Gaps = 17/377 (4%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY-- 155
H+ P+ A L+ LAR R FD +++H++ T + +S+ I L FQ Y
Sbjct: 72 HYYPSYAAL---LYKLARSRMFDAVETILAHMKDTE--MQCRESVFIAL-----FQHYGP 121
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
E+ +E F+RM + F R S FN LL EA +F K F PN T
Sbjct: 122 EKAVELFNRMPQ--FNCTRTIQS--FNALLNVLIDNDRFDEANDIFGKSYEMGFRPNTVT 177
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NI++ G G+ + EM+ + +PSVVTYN I C+KG AM L E+M
Sbjct: 178 FNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLDKAMALLEDMG 237
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ + T L+ G V +A++L +M R K + +++ L + +
Sbjct: 238 QKGKHANEVTYALLMEGLCSVEKTEEAKKLMFDMAYRGCKAQPVNFGVLMNDLGKRGKVE 297
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A L+ EM+++R+ D VTY+ + L K K+ M G VP T M++
Sbjct: 298 EAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQIGGCVPNAATYRMVV 357
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
C ++ L++ ++ CP + +V GL G + + ++M R+ +
Sbjct: 358 DGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNIDGSCFVLEEMEKRKLE 417
Query: 455 VSEASYRMLQRYLVQAN 471
S+ + + N
Sbjct: 418 FDLESWETIIKSACSEN 434
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 118/281 (41%), Gaps = 15/281 (5%)
Query: 63 PLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA 122
P + T V GRL A KA E F LQ P+ + + L R D+A
Sbjct: 173 PNTVTFNIMVKGRL--AKGEWGKACEVFDEMLQK-RVQPSVVTYNSLIGFLCRKGDLDKA 229
Query: 123 WELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE 180
L+ + + H + +T + + S E+T EA M + G K
Sbjct: 230 MALLEDMGQKGKHANEVTYALL------MEGLCSVEKTEEAKKLMFDMAYRGC-KAQPVN 282
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F VL+ + +++EA+S+ ++ R P+ T NIL+ + G EM
Sbjct: 283 FGVLMNDLGKRGKVEEAKSLLHEMKKRRLKPDVVTYNILINYLCKEGKAMEAYKVLLEMQ 342
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G P+ TY + +DG C+ G F A+ + M P +T ++ G NI
Sbjct: 343 IGGCVPNAATYRMVVDGLCQIGDFEVALSVLNAMLTSRHCPRSETFNCMVVGLLKSGNID 402
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ + +EM KR L+ D+ ++ +I S C + A ELM
Sbjct: 403 GSCFVLEEMEKRKLEFDLESWETIIKSA--CSENKGASELM 441
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 90/199 (45%), Gaps = 8/199 (4%)
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
V + +A LF ++ + +Y A++ L R R +A ++ M++ +
Sbjct: 52 VEDPEEALSLFHRYKEQGFRHYYPSYAALLYKLARSRMFDAVETILAHMKDTEMQ----C 107
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
++F L + G E +L++RM + ++ L+ N R D +++G
Sbjct: 108 RESVFIALFQHYGPEKAVELFNRMPQFNCTRTIQSFNALLNVLIDNDRFDEANDIFGKSY 167
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
+ GF P+ +++V G ++G W +A E +ML +R Q S +Y L +L + +
Sbjct: 168 EMGFRPNTVTFNIMVKGRLAKGEWGKACEVFDEMLQKRVQPSVVTYNSLIGFLCRKGDLD 227
Query: 475 K----LEDLDRMIKNLQAV 489
K LED+ + K+ V
Sbjct: 228 KAMALLEDMGQKGKHANEV 246
>gi|218202055|gb|EEC84482.1| hypothetical protein OsI_31142 [Oryza sativa Indica Group]
Length = 586
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 110/453 (24%), Positives = 186/453 (41%), Gaps = 16/453 (3%)
Query: 33 IERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKF 92
+ + R+++D P L L P TP + V L L +L FF F
Sbjct: 65 VGSLCRVLSDFRGPRHDLPAALRGFAPWLTPGDAAAV------LRRCRHLPLPSLRFFLF 118
Query: 93 TLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKF 152
+ P F+ PD+ + LA R F L+S + PS L+ ++ S+
Sbjct: 119 AGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLP---PSALSRGLFPLLFRAYSRA 175
Query: 153 QSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN 212
+ E+ + AF M F +F+ LL A ++ F + ++F +
Sbjct: 176 RLPEDAIRAFSSMAGFGFPPT----IADFHSLLFALSRNGLVEYGERFFRESSAQFDVSA 231
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K IL+ G+ + EMV RG V YN ID C+ G A
Sbjct: 232 KAYTILISGWAVVKKPENARSLFDEMVERGVELDVHVYNALIDALCRGGDITSAQEQLSN 291
Query: 273 MERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
M++ +P+ T +H A +++ A ++ D M L P++ YNA+I L
Sbjct: 292 MQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLG 351
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++N A ++DE+ + D +Y+T+ K + +L RM + P +
Sbjct: 352 EINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYN 411
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS-RGRWEEAFECSKQMLV 450
ML+K R D + +W + RGF P +++ GL S +GR E+A +M+
Sbjct: 412 MLLKMLIGVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVD 471
Query: 451 RRRQVSEASYRMLQRYLVQANANEKLEDL-DRM 482
+A+ +L+ L+ ++L L DRM
Sbjct: 472 EGIPPYQATCEVLRDRLLMLGLRDQLGVLTDRM 504
>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 606
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 133/285 (46%), Gaps = 5/285 (1%)
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F+ +R + G K + L+ A Q + ++ +++ R PN T N+++
Sbjct: 172 GFEAFKRSGYYGY-KLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVI 230
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG---DAMRLFEEMERV 276
++G + +M + G+ P+VV+YN IDGYCK G G A + +EM
Sbjct: 231 NALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVEN 290
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P+L T LI G N+ + ++F EM +++ P++ YN++I+ L +N A
Sbjct: 291 EVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEA 350
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ + D+M + + +TYH++ G K+ ++ ++D + P TR ML+
Sbjct: 351 IGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDA 410
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+C ++D G L + G P + L+ GLC G E A
Sbjct: 411 YCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAA 455
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/311 (25%), Positives = 149/311 (47%), Gaps = 9/311 (2%)
Query: 181 FNVLLQAFCT---QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+N L+ +C +M +A +V +++ + +PN T NIL+ GF + ++ +
Sbjct: 261 YNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFK 320
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ + P+V+TYN I+G C G +A+ + ++M P+L T +LI+G
Sbjct: 321 EMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNG 380
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A +FD + + +P YN +I + + ++ L +EME + I D TY+
Sbjct: 381 MMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYN 440
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL ++ +E KL+D++ K +P T +LM+ +C L +
Sbjct: 441 CLIAGLCRNGNIEAAKKLFDQLTN-KGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKM 499
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR-QVSEASYRMLQRYLVQANANEK 475
G P ++++ G C G + A QM RR +++ ASY +L + Q K
Sbjct: 500 GLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG---K 556
Query: 476 LEDLDRMIKNL 486
LED + ++ +
Sbjct: 557 LEDANMLLNEM 567
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 114/239 (47%), Gaps = 6/239 (2%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K + + LL S DV E Y EM+ R +P+V T+N+ I+ CK G A + E+
Sbjct: 192 KPLMVALLKQNRSADV---EYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMED 248
Query: 273 MERVACLPSLQTITTLIHGA---GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
M+ P++ + TLI G G +++A + EM + + P++ +N +I +
Sbjct: 249 MKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWK 308
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+L ++++ EM ++ + + +TY+++ GL + + D+M+ P T
Sbjct: 309 DDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLIT 368
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+ FC N + L+++ + +G P ++L+ C G+ ++ F ++M
Sbjct: 369 YHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 125/288 (43%), Gaps = 60/288 (20%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT-AMEMFYHEM 238
+N L+ C ++ EA + K++S PN T + L+ GF ++G + A++MF +
Sbjct: 334 YNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF-DSV 392
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
+G RP+ YN+ ID YCK G D L EEMER +P + T LI AGL RN
Sbjct: 393 KGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI--AGLCRNG 450
Query: 298 -IHQARQLFD----------------------------------EMPKRNLKPDIGAYNA 322
I A++LFD EM K LKP YN
Sbjct: 451 NIEAAKKLFDQLTNKGLPDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNI 510
Query: 323 MISSLIRCRDLNAAMELMDEME-EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
M+ + +L AA + +ME E+R+ + +Y+ + G + LE L + M+E
Sbjct: 511 MMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEK 570
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP--HGHALDL 427
VP T ++ + ++D+GF P GH ++
Sbjct: 571 GLVPNRITYEIVKE----------------EMVDKGFVPDIEGHLFNV 602
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 114/229 (49%), Gaps = 10/229 (4%)
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
P+L+T S+ ++ K +E L+ FD ++ + G R + +N+L+ A+C
Sbjct: 362 VQPNLITYHSL---INGFCKNGMMKEALDMFDSVKGQ---GTRP-TTRMYNMLIDAYCKL 414
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ + ++ ++ P+ T N L+ G +G++ A + + ++ +G P +VT+
Sbjct: 415 GKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTF 473
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
+I ++GYC +G A L +EM ++ P T ++ G N+ A + +M K
Sbjct: 474 HILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEK 533
Query: 311 -RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
R L+ ++ +YN ++ + L A L++EM EK + + +TY +
Sbjct: 534 ERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIV 582
>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
Length = 333
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 119/268 (44%), Gaps = 1/268 (0%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ +++ GF +G ++ EMV G P VVTYN ++G CK+ DA
Sbjct: 12 LVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAE 71
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L EM P L T TTLIHG + + +A QLFD M + L+PDI YN +I +
Sbjct: 72 GLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGM 131
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
R DL+ A +L D+M + I ++VTY + + +E D MI +P
Sbjct: 132 CRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNI 191
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T ++K +C + V G ++ P + L+ G + +AF+
Sbjct: 192 MTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNM 251
Query: 448 MLVRRRQVSEASYRML-QRYLVQANANE 474
M + Q +Y ML + V N E
Sbjct: 252 MEKEKVQPDVVTYNMLINGFSVHGNVQE 279
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 68/272 (25%), Positives = 125/272 (45%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMV 239
+N LL C ++ + +A + ++ R P + T L+ G+ G + + M+
Sbjct: 54 YNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTML 113
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ RP +VTYN IDG C++G A L+++M P+ T + LI +
Sbjct: 114 NQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVE 173
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A DEM + + P+I YN++I R +++ + + +M ++ D +TY+T+
Sbjct: 174 DAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLI 233
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K + KL + M + K P T ML+ F V+ V ++ + +G
Sbjct: 234 HGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIE 293
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P + ++ G + G +EAF+ +ML R
Sbjct: 294 PDRYTYMSMINGHVTAGNSKEAFQLHDEMLQR 325
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 109/230 (47%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ EM G P V Y + I G+C+ G DA+R+ +EM CLP + T TL++G
Sbjct: 3 YLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLC 62
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
R + A L +EM +R + PD+ + +I L+ A++L D M +R+ D V
Sbjct: 63 KERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIV 122
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ G+ + L+ L+D M + P T +L+ C +V+ +
Sbjct: 123 TYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEM 182
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
I++G P+ + ++ G C G + + ++M+V + +Y L
Sbjct: 183 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTL 232
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 1/209 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C Q ++ +A ++ + SR PN+ T +IL+ E G V F EM+
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYN I GYC+ G + ++M P L T TLIHG +H
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + M K ++PD+ YN +I+ ++ A + ++M K I D TY +M
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
G + + + +L+D M++ F P +
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRGFAPDDK 332
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/255 (24%), Positives = 122/255 (47%), Gaps = 12/255 (4%)
Query: 103 PD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PD F +H D+A +L + QR P ++T ++ + R +
Sbjct: 84 PDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDL 143
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
+ D REIF +++L+ + C + ++++A +++++ PN T N
Sbjct: 144 WD--DMHSREIFPN-----HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 196
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ G+ SG+V+ + F +M++ P ++TYN I GY K+ DA +L ME+
Sbjct: 197 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 256
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + T LI+G + N+ +A +F++M + ++PD Y +MI+ + + A
Sbjct: 257 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAF 316
Query: 338 ELMDEMEEKRIGHDN 352
+L DEM ++ D+
Sbjct: 317 QLHDEMLQRGFAPDD 331
>gi|255660776|gb|ACU25557.1| pentatricopeptide repeat-containing protein [Verbena perennis]
Length = 418
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 147/352 (41%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/313 (23%), Positives = 131/313 (41%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAXILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKLMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 102/257 (39%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ +LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKLMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 874
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 146/344 (42%), Gaps = 27/344 (7%)
Query: 147 SRISKFQSYEETLEA---FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
SRIS + L+A F ME + ++G+ + S +N++L+ FC +++A+++F
Sbjct: 257 SRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFES 316
Query: 204 LLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
+ + ++ NI L G G E +M+ +G PS+ +YNI +DG CK G
Sbjct: 317 IRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGM 376
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA + M+R P T L+HG V + A+ L EM + N P+ N
Sbjct: 377 LSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNI 436
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY------- 375
++ SL ++ A EL+ +M EK G D VT + + GL S L+ ++
Sbjct: 437 LLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHG 496
Query: 376 ----------------DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
D +IE +P T L+ C R L+ ++
Sbjct: 497 SAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQ 556
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P A ++ + C +G+ AF K M + S +Y L
Sbjct: 557 PDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSL 600
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 86/345 (24%), Positives = 156/345 (45%), Gaps = 27/345 (7%)
Query: 112 ILARMRYFDQAWEL-----MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRME 166
IL R + ++ EL S +Q+T +S +LS +S F +AF + +
Sbjct: 48 ILVRAKMHEEIEELHNLILSSSIQKTK--------LSSLLSVVSIFAKSNHIDKAFPQFQ 99
Query: 167 REIFVGIR----KFGSEEFNVLLQAFCTQKEMKEARSVFVK--LLSRFAPNNKTMNILLL 220
FV R K G +NVLL++ C ++ E S K +L +P T N+L+
Sbjct: 100 ---FVRSRFPENKPGIYLYNVLLES-CIRERRVEFVSWLYKDMVLCGISPETYTFNLLIR 155
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
+S V A + EM +G +P+ T+ I + GYCK G + L ME LP
Sbjct: 156 ALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLP 215
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T++ + +L ++M + L PDI +N+ IS+L + + A +
Sbjct: 216 NKVVYNTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIF 275
Query: 341 DEME-EKRIG---HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ME ++ +G +++TY+ M G K LE L++ + E + ++ + ++
Sbjct: 276 SDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQG 335
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ + + +ID+G P ++ ++L+ GLC G +A
Sbjct: 336 LVRHGKFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDA 380
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/408 (21%), Positives = 160/408 (39%), Gaps = 65/408 (15%)
Query: 102 TPDA--FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
+PDA + LH + D A L+ + R + L + +I+L + E
Sbjct: 393 SPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN-CLPNAYTCNILLHSLWNMGRISEAE 451
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV------------------F 201
E +M + + + N+++ C E+ +A + +
Sbjct: 452 ELLRKMNEKGY----GLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSY 507
Query: 202 VKLL------SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
+ L+ + P+ T + LL G ++G + + EM+ +P + YNI I
Sbjct: 508 IGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIH 567
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
+CK+G A R+ ++ME+ C SL+T +LI G G+ I + L DEM ++ + P
Sbjct: 568 HFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISP 627
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI--------------------------- 348
+I YN I L + A L+DEM +K I
Sbjct: 628 NICTYNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF 687
Query: 349 -------GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
G Y MF L+ + L +L + +++ F T L+ C
Sbjct: 688 ETAVSICGQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKD 747
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+++ + +ID+G+ AL ++ GL G +EA +++M+
Sbjct: 748 ELEVASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMM 795
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 62/135 (45%)
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
KP I YN ++ S IR R + L +M I + T++ + L SS ++ +
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L+D M E P T +L++ +C D GL L + G P+ + +V+ C
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228
Query: 434 SRGRWEEAFECSKQM 448
GR +++ + ++M
Sbjct: 229 REGRNDDSEKLVEKM 243
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 58/282 (20%), Positives = 105/282 (37%), Gaps = 42/282 (14%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P L+T S +L+ + K + E F M E + S +N+ + FC Q +
Sbjct: 522 PDLITY---STLLNGLCKAGRFAEAKTLFAEMMGEKL----QPDSLAYNIFIHHFCKQGK 574
Query: 194 MKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ A V + + + +T N L+LG + + EM +G P++ TYN
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNT 634
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD------ 306
I C+ G DA L +EM + P++ + LI V + A+++F+
Sbjct: 635 AIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSIC 694
Query: 307 ----------------------------EMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
+ R + Y ++ SL + +L A
Sbjct: 695 GQKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASG 754
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
++ +M +K G D + GL K + ++M+E
Sbjct: 755 ILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMME 796
>gi|125548610|gb|EAY94432.1| hypothetical protein OsI_16202 [Oryza sativa Indica Group]
gi|125590647|gb|EAZ30997.1| hypothetical protein OsJ_15079 [Oryza sativa Japonica Group]
Length = 485
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 130/303 (42%), Gaps = 5/303 (1%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
K ++++ + + FD M+ G+R+ FN ++ C ++ A +
Sbjct: 117 KLFNVLMRDLVRLGELASAQNVFDEMQSR---GVRRT-VVSFNTMISGMCRAGDLDGAET 172
Query: 200 VFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ ++ + P+ T L+ G G + + +M RG +P+ V + I ID +C
Sbjct: 173 LHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHC 232
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
KKG + L EM P T +++G R++ A + EM L+PD
Sbjct: 233 KKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTV 292
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + +L+ AME+ M + +G D VTY + GL K+ ++ M
Sbjct: 293 TYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEM 352
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
+E P T M++ FC V GL L + ++G P ++++ G C G+
Sbjct: 353 MEAGLEPDNTTYTMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQM 412
Query: 439 EEA 441
+ A
Sbjct: 413 KNA 415
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 120/269 (44%), Gaps = 1/269 (0%)
Query: 196 EARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
EA + +++LL + P K N+L+ G++ + + + EM RG R +VV++N I
Sbjct: 99 EACAFYLQLLDAGLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMI 158
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
G C+ G A L M P + T LI G V I AR +F++M R +K
Sbjct: 159 SGMCRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMK 218
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
P+ + +I + + D +EL EM E+ + D VTY+ + GL ++ L+ +
Sbjct: 219 PNAVVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRARDLKSASGI 278
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
M P T T L+ +C +D+ + + ++ G L++GL
Sbjct: 279 VVEMRSAGLRPDTVTYTTLIDGYCKEEELDMAMEIKQNMVAEGVGLDEVTYTALISGLSK 338
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRML 463
GR +A +M+ + +Y M+
Sbjct: 339 AGRSADAERVLGEMMEAGLEPDNTTYTMV 367
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 101/259 (38%), Gaps = 36/259 (13%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+Q C +++AR VF K+ R PN IL+ + GD M + EM
Sbjct: 189 YGALIQGLCRVGRIEDARGVFEKMCGRGMKPNAVVFTILIDAHCKKGDAETMLELHREMR 248
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG-------- 291
RG RP VTYN ++G C+ A + EM P T TTLI G
Sbjct: 249 ERGVRPDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTLIDGYCKEEELD 308
Query: 292 ---------------------AGLVRNIHQA------RQLFDEMPKRNLKPDIGAYNAMI 324
L+ + +A ++ EM + L+PD Y +I
Sbjct: 309 MAMEIKQNMVAEGVGLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTYTMVI 368
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ R D+ + L+ EM+ K VTY+ + G K ++ L + MI
Sbjct: 369 DAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMINIGVS 428
Query: 385 PKTRTVVMLMKFFCVNFRV 403
P T +L+ C + +V
Sbjct: 429 PDDITYNILLDGHCKHGKV 447
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 77/168 (45%), Gaps = 4/168 (2%)
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
QL D L P+ +N ++ L+R +L +A + DEM+ + + V+++TM G+
Sbjct: 106 QLLDA----GLPPEAKLFNVLMRDLVRLGELASAQNVFDEMQSRGVRRTVVSFNTMISGM 161
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++ L+G L+ RM E P T L++ C R++ ++ + RG P+
Sbjct: 162 CRAGDLDGAETLHRRMSEAGVTPDVYTYGALIQGLCRVGRIEDARGVFEKMCGRGMKPNA 221
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+L+ C +G E E ++M R + +Y + L +A
Sbjct: 222 VVFTILIDAHCKKGDAETMLELHREMRERGVRPDAVTYNAIVNGLCRA 269
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/237 (22%), Positives = 100/237 (42%), Gaps = 25/237 (10%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
PDA + ++ L R R A ++ ++ P +T ++ I + EE
Sbjct: 254 PDAVTYNAIVNGLCRARDLKSASGIVVEMRSAGLRPDTVTYTTL------IDGYCKEEEL 307
Query: 159 LEAFDRMEREIFVGIRKFGSEE--FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTM 215
A + + + G+ G +E + L+ +A V +++ + P+N T
Sbjct: 308 DMAMEIKQNMVAEGV---GLDEVTYTALISGLSKAGRSADAERVLGEMMEAGLEPDNTTY 364
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+++ F GDV EM +G +P VVTYN+ ++G+CK G +A L M
Sbjct: 365 TMVIDAFCRKGDVKTGLRLLKEMQNKGRKPGVVTYNVIMNGFCKLGQMKNADMLLNAMIN 424
Query: 276 VACLPSLQTITTLIHGA---GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+ P T L+ G G V +I + + + PD+G Y +++ +++
Sbjct: 425 IGVSPDDITYNILLDGHCKHGKVTDIEELKS------AKGTVPDLGVYTSIVGEIVK 475
>gi|255660782|gb|ACU25560.1| pentatricopeptide repeat-containing protein [Verbena halei]
Length = 418
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 124/269 (46%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ +F + E++ A+SVF + P+ + N L+ G+ + GD+ + M
Sbjct: 139 FNILMHSFVKEGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQ 198
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + V TY++ I+G CK DA LF+EM +P+ T TTLI G R +
Sbjct: 199 ASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVD 258
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +++ +M ++L PD+ YN +I L + DL A +L+DEM K + D +TY T+
Sbjct: 259 VAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLI 318
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K LE + RMI+ L+ C R + ++ G
Sbjct: 319 DGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLK 378
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P +++ C +G + K+M
Sbjct: 379 PEIGTYTMIINEFCEKGDVWTGLKLLKEM 407
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 145/341 (42%), Gaps = 17/341 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSH-VQRTHPSLLTLKSMSI 144
A+E ++ +H P D K L L +++YF W ++ +P+ +L +I
Sbjct: 85 AIECYRLIKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGFYEESLECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ K E R+ + +F I K+ FN L+ + ++ E R
Sbjct: 142 LMHSFVK--------EGEIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S + T ++L+ G ++ + + EM+ G P+ VT+ IDG+CK
Sbjct: 194 KNAMQASGVQSDVYTYSVLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
AM ++++M + P L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 254 NRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKIT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I D+V Y + GL + K+ M+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P+ T M++ FC V GL L + G+ P
Sbjct: 374 SVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEMQRDGYMP 414
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 133/313 (42%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+ FR T ++ K F +EE SL L+H
Sbjct: 91 LIKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQSDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K+S ++ +L+D M++ VP T L+ C N RVD+ + ++ ++ +
Sbjct: 211 VLINGLCKASKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/191 (20%), Positives = 79/191 (41%), Gaps = 14/191 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYE 156
P F + + R D A E+ + Q P L+T ++ L + + +
Sbjct: 237 LVPNGVTFTTLIDGHCKNRRVDVAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQ 296
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNK 213
+ ++ E+ + K + L+ C + +++ A R +K R ++
Sbjct: 297 DLID-------EMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDV 347
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
L+ G + G E EM+ G +P + TY + I+ +C+KG ++L +EM
Sbjct: 348 AYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCEKGDVWTGLKLLKEM 407
Query: 274 ERVACLPSLQT 284
+R +PS+ T
Sbjct: 408 QRDGYMPSVVT 418
>gi|255660940|gb|ACU25639.1| pentatricopeptide repeat-containing protein [Stachytarpheta
cayennensis]
Length = 484
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 110/467 (23%), Positives = 191/467 (40%), Gaps = 62/467 (13%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL + N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HSAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 128 HVQRT----HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ + L L M+ K +E+++ F +ME +G+ + + ++
Sbjct: 70 DMPKKGLEWDEDLWVL-----MIDSYGKAGIVQESVKMFQKMEE---LGVER-TIKSYDA 120
Query: 184 LLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L + + A+ F K+LS P T N+++ GF SG V F+ +M R
Sbjct: 121 LFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMMWGFFLSGKVETANRFFEDMKSRE 180
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VVTYN ++GYC+ +A + F EM+ P++ T TTLI G V + A
Sbjct: 181 IMPDVVTYNTMVNGYCRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDRVDDAL 240
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFG 361
+ +EM +KP+ Y+ ++ L ++ A ++ EM +K I DN + + G
Sbjct: 241 RFVEEMKGFGMKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISG 300
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG---- 417
K+ L+ + MI + +L++ +C D + L +I++
Sbjct: 301 QCKAGDLDAAANVLKAMIRLSVPTEAGHYGVLIENYCKAGEYDKAIKLLDKVIEKDIILR 360
Query: 418 ------------------FCPHGH--------------------ALDLLVTGLCSRGRWE 439
C +G AL+ L+ G G +
Sbjct: 361 PQSTLHMESSAYNPLIEYLCNNGQTAKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPD 420
Query: 440 EAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
AFE K ML R+ +++Y ++Q YL + + LD MI+N
Sbjct: 421 SAFELLKIMLRRKVDSEQSAYDSLVQSYLKKNEPADAKAALDSMIEN 467
>gi|326511761|dbj|BAJ92025.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 489
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 71/232 (30%), Positives = 108/232 (46%), Gaps = 7/232 (3%)
Query: 156 EETLEAFDRMEREIFVGIRKFGSE-EFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
E LE RME E SE +N ++ C + M++A + ++ + R PN
Sbjct: 249 EHALELKKRMELEGLTP-----SELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTV 303
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G+ GD + EMV +G +VTYN I G C+ G A LF+++
Sbjct: 304 TFNTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQL 363
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
+R P+ T + LI G +N +A QL + M K P+ Y +IS+ + +D
Sbjct: 364 DRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDF 423
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
A+++M E+ E R+ D V H F L K+ L L GKF+P
Sbjct: 424 EGAVDVMKELLEMRMAPDKVLLHEFFEALSKAKKLHLAEDLQSADKSGKFIP 475
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/276 (27%), Positives = 120/276 (43%), Gaps = 2/276 (0%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
E NV + A K + A S F ++ R +PN T N+LL F G V M E
Sbjct: 162 ESCNVFISAALCLKRPEIAVSFFREMRRCRISPNMYTANMLLRAFCALGRVADAAMVLDE 221
Query: 238 MVLRGFRPSVVTYNIRIDGYCKK-GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
M G +VV++N I YC++ G A+ L + ME PS T T+IHG
Sbjct: 222 MPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRMELEGLTPSELTYNTIIHGLCKEG 281
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ QA +L EM + P+ +N +I + D + +EM +K + D VTY+
Sbjct: 282 RMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDNGTTSRVHEEMVKKGVELDIVTYN 341
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL + ++ L+ ++ K P T L+ C + L L +
Sbjct: 342 ALILGLCRDGKIKKAEHLFQQLDRPKLEPNASTFSALILGHCKTQNSERALQLLNVMKKS 401
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
GF P+ ++++ C +E A + K++L R
Sbjct: 402 GFHPNYDTYKIVISTFCKNKDFEGAVDVMKELLEMR 437
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 111/241 (46%), Gaps = 2/241 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGF-KESGDVTAMEMFYHEMV 239
N+LL+AFC + +A V ++ + N L+ + +E G + M
Sbjct: 200 NMLLRAFCALGRVADAAMVLDEMPDWGVDRTVVSFNTLIAAYCREHGGLEHALELKKRME 259
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G PS +TYN I G CK+G A RL EM + +P+ T TLI+G + +
Sbjct: 260 LEGLTPSELTYNTIIHGLCKEGRMRQANRLLSEMRAMRVVPNTVTFNTLIYGYVMHGDNG 319
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
++ +EM K+ ++ DI YNA+I L R + A L +++ ++ + T+ +
Sbjct: 320 TTSRVHEEMVKKGVELDIVTYNALILGLCRDGKIKKAEHLFQQLDRPKLEPNASTFSALI 379
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ E +L + M + F P T +++ FC N + +++ L++
Sbjct: 380 LGHCKTQNSERALQLLNVMKKSGFHPNYDTYKIVISTFCKNKDFEGAVDVMKELLEMRMA 439
Query: 420 P 420
P
Sbjct: 440 P 440
>gi|255660950|gb|ACU25644.1| pentatricopeptide repeat-containing protein [Casselia glaziovii]
Length = 481
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 106/449 (23%), Positives = 185/449 (41%), Gaps = 58/449 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT----HPSLLTLKS 141
AL+FF++ + F + K + IL R + A ++ + + L L
Sbjct: 28 ALQFFRWVERSNLFQHDRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDLWVL-- 85
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
M+ K +E+++ F +ME +G+ + + ++ L + + A+ F
Sbjct: 86 ---MIDSYGKKGIVQESVKLFQKMEE---LGVER-TIKSYDALFKVILRRGRFMMAKRYF 138
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
K+L+ P T N+++ GF SG V F+ +M R P V+TYN I+GY +
Sbjct: 139 NKMLNEGIEPTRHTFNVMIWGFFLSGKVETANXFFEDMKSRDITPDVITYNTLINGYYRV 198
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
+A R F EM+ P++ T TTLI G V + A L +EM +KP+ Y
Sbjct: 199 KKMEEAERYFVEMKGRNIEPTVITYTTLIKGYVSVDRVDDALSLMEEMKGFGIKPNAITY 258
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ ++ L ++ A ++ EM +K I DN + + G K+ L+ + MI
Sbjct: 259 STLLPGLCNAEKMSEAQSILKEMVDKYIAPTDNSIFLKLISGQCKAGNLDAAADVLKAMI 318
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG---------------------- 417
+ +L++ +C + D +NL LI++
Sbjct: 319 RLSVPTEAGHYGVLIENYCKAEKYDKAVNLLDKLIEKDIILRPQSTLHMEPSAYNPMIEY 378
Query: 418 FCPHGH--------------------ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C +G AL+ L+ G G + AFE K ML R+ +
Sbjct: 379 LCDNGQTAKAETLVRQLMKLGVQEPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEK 438
Query: 458 ASY-RMLQRYLVQANANEKLEDLDRMIKN 485
++Y ++Q YL + + LD MI+N
Sbjct: 439 SAYDSLVQSYLKKNEPADAKAALDSMIEN 467
>gi|410109875|gb|AFV61017.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
herrerae]
Length = 395
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 85/354 (24%), Positives = 149/354 (42%), Gaps = 46/354 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H + P D K L L +++YF W + + +P+ L
Sbjct: 72 AIECYRLTREHKFWVPL-DXCRKVLEHLMKLKYFKLVWGFYKEILECGYPASLYF----- 125
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
FN+L+ FC + +++ A+SVF
Sbjct: 126 ------------------------------------FNILMHRFCKEGDIRLAQSVF-DA 148
Query: 205 LSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
++++ P+ + N L+ G+ GD+ + M G +P V TY++ I+G CK+
Sbjct: 149 ITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESK 208
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN
Sbjct: 209 MDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNT 268
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L + DL A +L+DEM K + D +TY T+ G K +E + RMI+
Sbjct: 269 LTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQEN 328
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P+ +++ C +G
Sbjct: 329 IRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKG 382
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 3/261 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 110 FYKEILECGYPASLYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 169
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM +K + + V
Sbjct: 170 RLGDLDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGV 229
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L C + +L +
Sbjct: 230 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEM 289
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + Y L L Q +
Sbjct: 290 SMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQENIRLDDVVYTALISGLCQEGRS 349
Query: 474 EKLEDLDRMIKNLQAVLPPPT 494
D ++M++ + +V P
Sbjct: 350 ---VDAEKMLREMLSVGLKPN 367
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 128/302 (42%), Gaps = 19/302 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKT---MNILLLGFKESGDVTAMEMFYHE 237
+ ++ CT + + EA+S+ ++SR + + IL + D+
Sbjct: 3 YCTMIHFLCTHQMLSEAKSLIQVVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITX 62
Query: 238 MVLRGF-RPSVVTYNIRID-------GYCKK--------GCFGDAMRLFEEMERVACLPS 281
+ GF R ++ Y + + C+K F ++E+ S
Sbjct: 63 YLESGFLRDAIECYRLTREHKFWVPLDXCRKVLEHLMKLKYFKLVWGFYKEILECGYPAS 122
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
L L+H +I A+ +FD + K L+P + ++N +++ IR DL+ L +
Sbjct: 123 LYFFNILMHRFCKEGDIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIRLGDLDEGFRLKN 182
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + D TY + GL K S ++ +L+D M++ VP T L+ C N
Sbjct: 183 AMHASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDKGLVPNGVTFTTLIDGHCKNG 242
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
RVDL + ++ ++ + P + L GLC +G ++A + +M ++ + + +Y
Sbjct: 243 RVDLAMEIYKQMLSQSLSPDLITYNTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYT 302
Query: 462 ML 463
L
Sbjct: 303 TL 304
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/248 (21%), Positives = 97/248 (39%), Gaps = 49/248 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ R+ D+ + L + H P + T S++++ + K ++
Sbjct: 156 PSVVSFNTLMNGYIRLGDLDEGFRLKNAMHASGVQPDVYTY---SVLINGLCKESKMDDA 212
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M + V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 213 NELFDEMLDKGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 266
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L G + GD+ EM ++G +P +TY
Sbjct: 267 NTLTYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDMETAFEHQKRMIQ 326
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P+ T T +I+ ++
Sbjct: 327 ENIRLDDVVYTALISGLCQEGRSVDAEKMLREMLSVGLKPNXGTYTMIINEFCKKGDVWT 386
Query: 301 ARQLFDEM 308
+L EM
Sbjct: 387 GSKLLKEM 394
>gi|242078797|ref|XP_002444167.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
gi|241940517|gb|EES13662.1| hypothetical protein SORBIDRAFT_07g011860 [Sorghum bicolor]
Length = 520
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 159/355 (44%), Gaps = 23/355 (6%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P DA+ + + R FD AW ++ ++ +LT ++M I++ R + + ++
Sbjct: 134 PPADAWHLAVWAAGKARRFDLAWAVVRRMRNR--GVLTGRAMVILMERYAAANEVNKAVK 191
Query: 161 AFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFAP-NNKTM 215
FD ME KF E F LL+A C K +++A + + L +F P + +
Sbjct: 192 TFDVME--------KFKVESDQSVFYSLLRALCKSKNIEDAEELLL-LRKKFFPLSAEGF 242
Query: 216 NILLLGFKES-GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
NI+L G+ D+ + + EM P ++Y + I + K G D +R+++EM+
Sbjct: 243 NIILDGWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFDTLRVYDEMK 302
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ +P + +L++ + A +F ++ L+PD+ YN+MI L L+
Sbjct: 303 KRGWIPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIVPLCESCKLD 362
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A +M+ M K I TYH +K G++ KL +M E PK+ T +ML
Sbjct: 363 EARVVMESMILKGIVPTISTYH----AFLKQEGIDESLKLLQKMKEDGCGPKSDTFLMLF 418
Query: 395 -KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
KFF +N + L +W + P +V GL G A E +M
Sbjct: 419 DKFFLLNESGN-ALRVWNEMRKYKISPVRSHYMTVVEGLVKHGCIPRALEYYDEM 472
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/261 (23%), Positives = 118/261 (45%), Gaps = 16/261 (6%)
Query: 92 FTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISK 151
F L F D + + LA + + W MS+ T + S ++M+S SK
Sbjct: 235 FPLSAEGFNIILDGWCNVITDLAEAK---RVWREMSNHCITPDGM----SYTLMISCFSK 287
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAP 210
S +TL +D M++ ++ G +N L+ + +K+A ++F KL P
Sbjct: 288 VGSLFDTLRVYDEMKKRGWIP----GIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQP 343
Query: 211 NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLF 270
+ +T N +++ ES + + M+L+G P++ TY+ + K+ ++++L
Sbjct: 344 DVETYNSMIVPLCESCKLDEARVVMESMILKGIVPTISTYH----AFLKQEGIDESLKLL 399
Query: 271 EEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRC 330
++M+ C P T L L+ A ++++EM K + P Y ++ L++
Sbjct: 400 QKMKEDGCGPKSDTFLMLFDKFFLLNESGNALRVWNEMRKYKISPVRSHYMTVVEGLVKH 459
Query: 331 RDLNAAMELMDEMEEKRIGHD 351
+ A+E DEM+EK D
Sbjct: 460 GCIPRALEYYDEMKEKGFASD 480
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 47/232 (20%), Positives = 89/232 (38%), Gaps = 5/232 (2%)
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
I ++ Y A++ F+ ME+ +L+ +NI A +L + K+
Sbjct: 175 ILMERYAAANEVNKAVKTFDVMEKFKVESDQSVFYSLLRALCKSKNIEDAEELL-LLRKK 233
Query: 312 NLKPDIGAYNAMISSLIRC-RDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+N ++ DL A + EM I D ++Y M K L
Sbjct: 234 FFPLSAEGFNIILDGWCNVITDLAEAKRVWREMSNHCITPDGMSYTLMISCFSKVGSLFD 293
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
++YD M + ++P L+ V N++ L D G P + ++
Sbjct: 294 TLRVYDEMKKRGWIPGIGVYNSLVYVLTRENCVKDAHNIFSKLTDEGLQPDVETYNSMIV 353
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
LC + +EA + M+++ + ++Y +L Q +E L+ L +M
Sbjct: 354 PLCESCKLDEARVVMESMILKGIVPTISTY---HAFLKQEGIDESLKLLQKM 402
>gi|297833654|ref|XP_002884709.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297330549|gb|EFH60968.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 689
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/374 (23%), Positives = 161/374 (43%), Gaps = 34/374 (9%)
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-----EREIFV---- 171
Q W+ + +P++ K+ +IM+S +SK ++ L+ +DRM E++++
Sbjct: 240 QLWDKLLEDSSVYPNV---KTHNIMISGLSKCGRVDDCLKIWDRMKQNEREKDLYTYSSL 296
Query: 172 --GIRKFGSEE--------------------FNVLLQAFCTQKEMKEARSVFVKLLSRFA 209
G+ G+ + +N +L FC ++KE+ ++ + R +
Sbjct: 297 IHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFCRCGKIKESLELWRIMEQRNS 356
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
N + NIL+ G E+G + M + M +G+ TY I I G C G A+ +
Sbjct: 357 VNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADNTTYGIFIHGLCVNGYVNKALGV 416
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+E+E + ++I R + +A L EM K ++ + NA+I LIR
Sbjct: 417 MQEVESKGGHLDVYAYASIIDCLCKKRRLEEASNLVKEMSKHGVELNSHVCNALIGGLIR 476
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
L+ A LM M + V+Y+ + GL ++ M+E P +T
Sbjct: 477 DSRLSDASLLMRGMGKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKT 536
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+L+ C + +++L L LW + G P ++L+ GLCS G+ ++A M
Sbjct: 537 YSILLGGLCRDRKIELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANME 596
Query: 450 VRRRQVSEASYRML 463
R + +Y L
Sbjct: 597 HRNCTANLVTYNTL 610
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 97/406 (23%), Positives = 172/406 (42%), Gaps = 60/406 (14%)
Query: 75 RLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHP 134
+L + N A F +HP + + + L L+ R +++HV R
Sbjct: 15 KLLKSEKNPRAAFALFDSATRHPGYAHSAVVYHHILRRLSEAR-------MVTHVGRIVE 67
Query: 135 SLLTLKSMSIMLSRISKFQSY------EETLEAFDRMEREIFV---GIRKFGSEEFNVLL 185
+ + + +S ++Y + L+ F RM REIF GIR +N LL
Sbjct: 68 LIRSQECKCDEDVALSVIKTYGKNSMPDRALDVFKRM-REIFGCEPGIR-----SYNTLL 121
Query: 186 QAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR 244
AF K+ + S+F + APN +T N+L+ + + F + M GF+
Sbjct: 122 NAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLNWMWKEGFK 181
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P V +Y+ I+ K G DA+ +L
Sbjct: 182 PDVFSYSTVINDLAKTGKLDDAL-----------------------------------EL 206
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TYHTMFFGLM 363
FDEM +R + PD+ YN +I ++ +D AM+L D++ E + NV T++ M GL
Sbjct: 207 FDEMSERRVAPDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLS 266
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K ++ K++DRM + + T L+ C VD +++ L++R
Sbjct: 267 KCGRVDDCLKIWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVV 326
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ G C G+ +E+ E + ++ +R V+ SY +L + L++
Sbjct: 327 TYNTMLGGFCRCGKIKESLELWR-IMEQRNSVNIVSYNILIKGLLE 371
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 117/257 (45%), Gaps = 3/257 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAP--NNKTMNILLLGFKESGDVTAMEMFYHEM 238
+ ++ C ++ ++EA S VK +S+ N+ N L+ G ++ + M
Sbjct: 432 YASIIDCLCKKRRLEEA-SNLVKEMSKHGVELNSHVCNALIGGLIRDSRLSDASLLMRGM 490
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P+VV+YNI I G C+ G FG+A +EM P L+T + L+ G R I
Sbjct: 491 GKNGCLPTVVSYNILICGLCEAGKFGEASAFVKEMLENGLKPDLKTYSILLGGLCRDRKI 550
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L+ + + L+PD+ +N +I L L+ AM +M ME + + VTY+T+
Sbjct: 551 ELALELWHQFLQSGLEPDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTL 610
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K ++ M + P + ++K C+ RV + + + G
Sbjct: 611 MEGYFKVRDSNRATVIWGYMYKMGLQPDIISYNTILKGLCLCHRVSYAIEFFDDARNHGI 670
Query: 419 CPHGHALDLLVTGLCSR 435
P + ++LV + +R
Sbjct: 671 FPTVYTWNILVRAVVNR 687
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 114/250 (45%), Gaps = 2/250 (0%)
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
A+++F + G P + +YN ++ + + + LF E P+LQT LI
Sbjct: 97 ALDVFKRMREIFGCEPGIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLI 156
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+ + +AR + M K KPD+ +Y+ +I+ L + L+ A+EL DEM E+R+
Sbjct: 157 KMSCKKKEFEKARGFLNWMWKEGFKPDVFSYSTVINDLAKTGKLDDALELFDEMSERRVA 216
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLN 408
D Y+ + G +K + +L+D+++E V P +T +++ RVD L
Sbjct: 217 PDVTCYNILIDGFLKEKDHKMAMQLWDKLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLK 276
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYL 467
+W + + L+ GLC G ++A +++ R+ + +Y ML +
Sbjct: 277 IWDRMKQNEREKDLYTYSSLIHGLCDEGNVDKAESVFNELVERKAFIDVVTYNTMLGGFC 336
Query: 468 VQANANEKLE 477
E LE
Sbjct: 337 RCGKIKESLE 346
>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 774
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/437 (23%), Positives = 169/437 (38%), Gaps = 83/437 (18%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P ++ +H L++ ++A +L+ + P + T + L R+++ E
Sbjct: 240 VPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIH---E 296
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI 217
+ DRM +F G + VL+ C ++ EA+ + K+ + PN+ I
Sbjct: 297 GAKLVDRM---LFRGFTP-NDITYGVLMNGLCRVGKVDEAQVLLNKVPT---PNDVHFTI 349
Query: 218 LLLGFKESGDVTAMEMF-YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G+ +SG + F Y +M+ G RP V T+N I G CKKG G A+ + +M
Sbjct: 350 LINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSAN 409
Query: 277 ACLPSLQTITTLIHG---------AGLVRN--------------------------IHQA 301
C P+L T TTL+ G AG V N + +A
Sbjct: 410 GCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKA 469
Query: 302 RQLFDEMPKRNLKPDI-----------------------------------GAYNAMISS 326
+ EM + KPDI YN +I +
Sbjct: 470 LDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHA 529
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
+R + A++L+++M + D +TY+ + K E L+D M+ VP
Sbjct: 530 FLRGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPS 589
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
+ +L+ C +V L L +I RG P + L+ GLC G EAF
Sbjct: 590 NISCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFN 649
Query: 447 QMLVRRRQVSEASYRML 463
++ Q +Y L
Sbjct: 650 KLQAEGIQPDAITYNTL 666
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 104/218 (47%), Gaps = 1/218 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVK-LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN L+ C ++A +++ LL N T N L+ F G + ++M+
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +TYN I +CK G A+ LF+EM R +PS + LI+G V +
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRVGKVC 607
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L +M R L PD+ YN++I+ L + ++ A L ++++ + I D +TY+T+
Sbjct: 608 NALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITYNTLI 667
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
++ + L R +E F+P T +L+ F
Sbjct: 668 CWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF 705
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 117/264 (44%), Gaps = 3/264 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+ LL FC + +++EA V ++ ++ F N N+LL ++G V A++M EM
Sbjct: 418 YTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML-GEM 476
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P + T+N I G CK DA+ L+ +M + + T TLIH I
Sbjct: 477 SDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAI 536
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +L ++M R D YN +I + + A+ L DEM K + N++ + +
Sbjct: 537 QEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLL 596
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL + + +L MI P T L+ C + NL+ L G
Sbjct: 597 INGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGI 656
Query: 419 CPHGHALDLLVTGLCSRGRWEEAF 442
P + L+ C G +++A+
Sbjct: 657 QPDAITYNTLICWHCRAGMFDDAY 680
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 102/450 (22%), Positives = 181/450 (40%), Gaps = 54/450 (12%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR 131
VL L +A+ + A F++ + PT F + L + D A L+ + +
Sbjct: 179 VLDILVSANCPSVAANVFYE--MLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTK 236
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ 191
H + ++ +SK E L ++ E+F+ + FN ++ C
Sbjct: 237 -HGCVPNSVVYQTLIHALSKRDRVNEAL----KLLEEMFLMGCLPDVDTFNDVIYGLCRL 291
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+ E + ++L R F PN+ T +L+ G G V ++ +++ P+ V +
Sbjct: 292 NRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVP----TPNDVHF 347
Query: 251 NIRIDGYCKKGCFGDAMR-LFEEMERVACLPSLQTITTLIHG---AGLV----------- 295
I I+GY K G +A L+++M + C P + T TLIHG GL+
Sbjct: 348 TILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMS 407
Query: 296 ---------------------RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ +A + +EM + + +I YN ++ +L + +
Sbjct: 408 ANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVP 467
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A++++ EM +K D T++T+ FGL K E LY M+ + T T L+
Sbjct: 468 KALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLI 527
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGH-ALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
F + L L ++ RG CP + L+ C G E+A +M+ +
Sbjct: 528 HAFLRGGAIQEALKLVNDMLFRG-CPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDL 586
Query: 454 QVSEASYRMLQRYLVQ----ANANEKLEDL 479
S S +L L + NA E L D+
Sbjct: 587 VPSNISCNLLINGLCRVGKVCNALELLRDM 616
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/306 (21%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC----------- 258
P K+ N++L + + ++EM+ +G P+V T+ + + C
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230
Query: 259 -----KKGC-------------------FGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
K GC +A++L EEM + CLP + T +I+G
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ IH+ +L D M R P+ Y +++ L R ++ A L++++ ++V
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTP----NDVH 346
Query: 355 YHTMFFGLMKSSGL-EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ + G +KS L E LYD+MI+ P T L+ C + +++ +
Sbjct: 347 FTILINGYVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDM 406
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P+ L+ G C + + EEA +M + +++ Y +L R L +
Sbjct: 407 SANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKV 466
Query: 474 EKLEDL 479
K D+
Sbjct: 467 PKALDM 472
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 93/244 (38%), Gaps = 3/244 (1%)
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRID--GYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
T+M +F +G+ + Y++ ID G K+ D + L + E +A SL
Sbjct: 84 TSMAIFQWAGSQKGYCHTFDVYHVLIDKLGAAKEFKVIDKLLLQIKEEGIAFRESLFICI 143
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
+G + R L D +P +YN ++ L+ + A + EM K
Sbjct: 144 MKYYGRANLPG-QATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSK 202
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ T+ + L + ++ C L M + VP + L+ RV+
Sbjct: 203 GVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEA 262
Query: 407 LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRY 466
L L + G P + ++ GLC R E + +ML R ++ +Y +L
Sbjct: 263 LKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVLMNG 322
Query: 467 LVQA 470
L +
Sbjct: 323 LCRV 326
>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
At2g32630-like [Vitis vinifera]
Length = 625
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C EA+ + ++ R +PN + L+ + + G+ + + EM
Sbjct: 438 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 497
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYN+ IDGY K+G +A +L +E+E +P + T T+LIHG + +
Sbjct: 498 EKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVD 557
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LFDEMP+R L P++ Y AMIS L + A +L DEM+E + D+ Y ++
Sbjct: 558 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 617
Query: 360 FGL 362
L
Sbjct: 618 GSL 620
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 144/316 (45%), Gaps = 19/316 (6%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRM-----EREIFVGIRKFGSEEFNVLLQAFCTQKEMK 195
+ ++++ S EE F+ M E +++V + ++ C +K
Sbjct: 297 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYV---------YTSIISCNCRSGNVK 347
Query: 196 EARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRI 254
A +F ++ + P+ T L+ G ++G + A +M +EM +G + V +N I
Sbjct: 348 RALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLI 407
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
DGYC+ G +A+RL ME+ + ++ G + +A+ L M +R +
Sbjct: 408 DGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVS 467
Query: 315 PDIGAYNAMISSLIRCRDLN--AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
P+ ++ +I I C++ N A + EMEEK + +TY+ + G K ++
Sbjct: 468 PNTMSFTTLID--IYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAH 525
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
KL D + +P T L+ C++ +VD+ L L+ + RG P+ +++GL
Sbjct: 526 KLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGL 585
Query: 433 CSRGRWEEAFECSKQM 448
GR EEAF+ +M
Sbjct: 586 SKDGRSEEAFKLYDEM 601
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 136/289 (47%), Gaps = 7/289 (2%)
Query: 155 YEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNK 213
+ E LEAF+ ME++ F V L A ++ F ++++
Sbjct: 171 FGEALEAFEHMEKKGF----HIDERSCLVYLLALRRGGQVDSCLRFFRRMVNLDVEVTVY 226
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
++ I+L G + GDV E+ +G + +VVTYN I+GY K+ G + M
Sbjct: 227 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 286
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E+ ++ T T LIHG + I +A++LF+EM ++ ++ D+ Y ++IS R ++
Sbjct: 287 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 346
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-M 392
A+ L DEM +K + TY + G+ K+ +E L + M +GK + +
Sbjct: 347 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM-QGKGIDLNPVIFNT 405
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ +C + VD L L + +G A + + +GLC R +EA
Sbjct: 406 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 454
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR------FAPNNKTMNILLLGFKESGDVTAMEMF 234
FN L+ +C + EA + V + + FA N+ + L K+ +
Sbjct: 403 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA-----KGL 457
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
MV RG P+ +++ ID YCK+G F +A R+F EME +P++ T LI G
Sbjct: 458 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 517
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD--LNAAMELMDEMEEKRIGHDN 352
N+ +A +L DE+ R L PD+ ++I C D ++ A++L DEM ++ + +
Sbjct: 518 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHG--ECIDGKVDMALKLFDEMPQRGLVPNV 575
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
VTY M GL K E KLYD M E P
Sbjct: 576 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 608
>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
Length = 648
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 58/183 (31%), Positives = 98/183 (53%), Gaps = 1/183 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N + C EA+ + ++ R +PN + L+ + + G+ + + EM
Sbjct: 442 YNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREME 501
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+++TYN+ IDGY K+G +A +L +E+E +P + T T+LIHG + +
Sbjct: 502 EKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVD 561
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +LFDEMP+R L P++ Y AMIS L + A +L DEM+E + D+ Y ++
Sbjct: 562 MALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLV 621
Query: 360 FGL 362
L
Sbjct: 622 GSL 624
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 11/312 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+ ++++ S EE F+ M E+ I + + S ++ C +K A
Sbjct: 301 TYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTS-----IISCNCRSGNVKRALV 355
Query: 200 VFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+F ++ + P+ T L+ G ++G + A +M +EM +G + V +N IDGYC
Sbjct: 356 LFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYC 415
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
+ G +A+RL ME+ + ++ G + +A+ L M +R + P+
Sbjct: 416 ESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTM 475
Query: 319 AYNAMISSLIRCRDLN--AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
++ +I I C++ N A + EMEEK + +TY+ + G K ++ KL D
Sbjct: 476 SFTTLID--IYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKD 533
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+ +P T L+ C++ +VD+ L L+ + RG P+ +++GL G
Sbjct: 534 ELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDG 593
Query: 437 RWEEAFECSKQM 448
R EEAF+ +M
Sbjct: 594 RSEEAFKLYDEM 605
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 66/229 (28%), Positives = 114/229 (49%), Gaps = 2/229 (0%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
++ I+L G + GDV E+ +G + +VVTYN I+GY K+ G + M
Sbjct: 231 SLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLM 290
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
E+ ++ T T LIHG + I +A++LF+EM ++ ++ D+ Y ++IS R ++
Sbjct: 291 EKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNV 350
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV-M 392
A+ L DEM +K + TY + G+ K+ +E L + M +GK + +
Sbjct: 351 KRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEM-QGKGIDLNPVIFNT 409
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
L+ +C + VD L L + +G A + + +GLC R +EA
Sbjct: 410 LIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA 458
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 102/213 (47%), Gaps = 15/213 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR------FAPNNKTMNILLLGFKESGDVTAMEMF 234
FN L+ +C + EA + V + + FA N+ + L K+ +
Sbjct: 407 FNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEA-----KGL 461
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
MV RG P+ +++ ID YCK+G F +A R+F EME +P++ T LI G
Sbjct: 462 LFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSK 521
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD--LNAAMELMDEMEEKRIGHDN 352
N+ +A +L DE+ R L PD+ ++I C D ++ A++L DEM ++ + +
Sbjct: 522 RGNMKEAHKLKDELENRGLIPDVYTCTSLIHG--ECIDGKVDMALKLFDEMPQRGLVPNV 579
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
VTY M GL K E KLYD M E P
Sbjct: 580 VTYTAMISGLSKDGRSEEAFKLYDEMKETGLTP 612
>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
Length = 758
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ E+ EA+ + +++ R P+ T N L++ + E+
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELT 399
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G P V T+NI I+ CK G +RLFEEM+ C P T LI + +
Sbjct: 400 VKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLG 459
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L +EM YN +I +L + + A E+ D+M+ + I VT++T+
Sbjct: 460 NALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLI 519
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K+ ++ +L ++M++ P T ++ +C + ++ + GF
Sbjct: 520 DGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFE 579
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
L+ GLC GR + A + + M ++ + + +Y + + L + N L D
Sbjct: 580 IDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRN---NLRDA 636
Query: 480 DRMIKNLQAVLPPP 493
+ + + V PP
Sbjct: 637 LNLFREMTEVGEPP 650
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 131/296 (44%), Gaps = 7/296 (2%)
Query: 181 FNVLLQAFCTQKEMKEA----RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
FN L+ A +Q ++EA R + VK LS P+ T NIL+ + GD +
Sbjct: 375 FNTLIVALSSQNRLEEALDLARELTVKGLS---PDVYTFNILINALCKVGDPHLGIRLFE 431
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM G P VTYNI ID C G G+A+ L EME C S T T+I
Sbjct: 432 EMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKM 491
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I +A ++FD+M + + +N +I L + + ++ A EL+++M ++ + +N+TY+
Sbjct: 492 RIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYN 551
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
++ K ++ + + M F T L+ C R + L L + +
Sbjct: 552 SILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIK 611
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
G P A + ++ L R +A ++M +Y+++ R L +
Sbjct: 612 GIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYKIVFRSLCRGGG 667
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 130/306 (42%), Gaps = 2/306 (0%)
Query: 182 NVLLQAFCTQKEMKEARS-VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
NVL+ +C +++A + ++ F P+ T N + G ++G V+ M+
Sbjct: 271 NVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQ 330
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P V TYN I+ K G +A + +M CLP T TLI + +
Sbjct: 331 EGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEE 390
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L E+ + L PD+ +N +I++L + D + + L +EM+ D VTY+ +
Sbjct: 391 ALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILID 450
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L L L + M T T ++ C R++ ++ + +G
Sbjct: 451 HLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISR 510
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDL 479
+ L+ GLC R ++A E +QM+ Q + +Y +L Y Q N + + L
Sbjct: 511 SAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADIL 570
Query: 480 DRMIKN 485
+ M N
Sbjct: 571 ETMTAN 576
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 122/269 (45%), Gaps = 1/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N L++A C +++ A + ++ S AP+ T L+ GF E G + A +M+
Sbjct: 200 LNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMM 259
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ VT N+ I+GYCK G DA+ ++ P T T +HG ++
Sbjct: 260 EAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVS 319
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ D M + PD+ YN +I+ L + +L+ A ++++M ++ D T++T+
Sbjct: 320 HALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLI 379
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + LE L + P T +L+ C LG+ L+ + G
Sbjct: 380 VALSSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCT 439
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P ++L+ LCS G+ A + +M
Sbjct: 440 PDEVTYNILIDHLCSMGKLGNALDLLNEM 468
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/399 (21%), Positives = 170/399 (42%), Gaps = 10/399 (2%)
Query: 75 RLFAA---HSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQR 131
RL AA S+ AL L F P+ +E+ + L FD L+ ++R
Sbjct: 58 RLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRR 117
Query: 132 THPSL--LTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
+ + ++S +R+ +F + + ++++ + F G++ + FN LL
Sbjct: 118 EGHQVRAVVVRSFVESYARLRRFDDAVDLV--LNQLDNDTF-GVQA-DTVVFNHLLNVLV 173
Query: 190 TQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++K SV+ ++ R P+ T+N L+ + V + EM G P
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+ + G+ ++G A+R+ +M C P+ T+ LI+G + + A +
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+PD YN + L + ++ A+++MD M ++ D TY+T+ L K+ L
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+ + ++M++ +P T T L+ R++ L+L L +G P + ++L
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+ LC G ++M E +Y +L +L
Sbjct: 414 INALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 106/239 (44%), Gaps = 15/239 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL----LSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+N ++ A C + ++EA VF ++ +SR A T N L+ G ++ +
Sbjct: 480 YNTIIDALCKKMRIEEAEEVFDQMDAQGISRSA---VTFNTLIDGLCKAKRIDDATELIE 536
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+MV G +P+ +TYN + YCK+G A + E M + T TLI+G
Sbjct: 537 QMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGLCKAG 596
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
A +L M + ++P AYN +I SL R +L A+ L EM E D +TY
Sbjct: 597 RTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDALTYK 656
Query: 357 TMFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+F L + G ++ M+ F+P+ + ML + L L + YLI
Sbjct: 657 IVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGL-------LNLGMDDYLI 708
>gi|224081867|ref|XP_002306508.1| predicted protein [Populus trichocarpa]
gi|222855957|gb|EEE93504.1| predicted protein [Populus trichocarpa]
Length = 439
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 94/397 (23%), Positives = 178/397 (44%), Gaps = 13/397 (3%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLK-ALEFFKFTLQHPHFTPTPDAFEKTLHILARMR 117
PQ+ PL+ L + + + + ++N K AL+FF + F T + + + + IL +
Sbjct: 37 PQSDPLN--LDSSTVFQTLSCYNNDWKRALDFFNWVETESQFQHTTETYNRMIDILGKFF 94
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
FD +W+L+ ++ S + ++ R E + ++ +E G++
Sbjct: 95 EFDLSWDLIQRMRNNPFSTPNHTTFRVLFHRYISAHLVNEAVSVYEDRLKEF--GLKDET 152
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPN---NKTMNILLLGFKESGDVTAMEMF 234
S + +L+ A C K + EA + + K N++L G+ + G F
Sbjct: 153 S--YCILVDALCEYKHVIEAHELCFGNNNNSINVRNITKIYNMILRGWFKMGWWGKCREF 210
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ EM + + +Y+I +D CK G A++L++EM+ + T+I+ GL
Sbjct: 211 WEEMDRKEVCKDLHSYSIYMDILCKSGKPWKAVKLYKEMKSKGIKLDVVAYNTVINAIGL 270
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ +++ EM + +P++ N +I L + A +++DEM + I D T
Sbjct: 271 SEGVDFVLRVYREMRELGCQPNVVTCNTVIKLLCENGRIKEAYKMLDEMPQSYIAPDVFT 330
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
YH F L K E +C L+D+MIE P+ T VMLM+ F + +W +
Sbjct: 331 YHCFFRCLEKPK--EILC-LFDQMIENGVCPRMDTYVMLMRKFGRWGFLRPVFLVWKKME 387
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
G P A + L+ L +G + A + ++M+ +
Sbjct: 388 KLGCSPDEFAYNALIDALIQKGMVDMARKYDEEMMAK 424
>gi|242067062|ref|XP_002454820.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
gi|241934651|gb|EES07796.1| hypothetical protein SORBIDRAFT_04g038070 [Sorghum bicolor]
Length = 600
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/336 (24%), Positives = 143/336 (42%), Gaps = 17/336 (5%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + +L+ +++ + FD M R + +N +L + A ++
Sbjct: 151 ACTALLTALARARMTATARRVFDEMARAGLA----VSTHVYNAMLHVCLKAGDAARAEAL 206
Query: 201 FVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLR------GFRPSVVTYNIR 253
++ + P ++ + N ++ + + G M Y M +R G R VT+N
Sbjct: 207 VTRMDAAGVPLDRFSYNTVIALYCKKG------MRYEAMCVRDRMDKEGIRADTVTWNSL 260
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I G CK G +A +LF EM P T TTLI G NI +A +L EM +
Sbjct: 261 IHGLCKYGRVKEAAQLFTEMAAAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGM 320
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
P + YNA++ L + +L++EM+E+++ D+VT +T+ K + CK
Sbjct: 321 LPGVATYNAILRKLCEDGKMKEVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACK 380
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
+ +M+E T L+ FC +D + ++D GF P+ LV G C
Sbjct: 381 VKKKMMESGLQLNQFTYKALIHGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFC 440
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + +++ R +A YR L R L +
Sbjct: 441 KKNNADAVLLIPDELMKRGLPPDKAVYRSLIRRLCR 476
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/313 (24%), Positives = 130/313 (41%), Gaps = 2/313 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +C + EA V ++ + T N L+ G + G V + EM
Sbjct: 222 YNTVIALYCKKGMRYEAMCVRDRMDKEGIRADTVTWNSLIHGLCKYGRVKEAAQLFTEMA 281
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
P VTY IDGYC+ G +A++L EME LP + T ++ +
Sbjct: 282 AAQATPDNVTYTTLIDGYCRAGNIEEAVKLRGEMEATGMLPGVATYNAILRKLCEDGKMK 341
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ QL +EM +R ++ D N +I++ + + +A ++ +M E + + TY +
Sbjct: 342 EVNQLLNEMDERKVQADHVTCNTLINAYCKRGHMTSACKVKKKMMESGLQLNQFTYKALI 401
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K+ L+ + + +M++ F P L+ FC D L + L+ RG
Sbjct: 402 HGFCKAKELDEAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLLIPDELMKRGLP 461
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ-RYLVQANANEKLED 478
P L+ LC +G ++A + QM + Y L YL +
Sbjct: 462 PDKAVYRSLIRRLCRKGLVDQAQKVFDQMQSKGLVGDSLVYATLAYTYLTEGKPVAASNT 521
Query: 479 LDRMIKNLQAVLP 491
LD M KN + P
Sbjct: 522 LDGMAKNQLYITP 534
>gi|356542070|ref|XP_003539494.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Glycine max]
Length = 729
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/417 (24%), Positives = 176/417 (42%), Gaps = 54/417 (12%)
Query: 30 SSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEF 89
S + I +IN PF + L +LL + +TT L + RL S KAL F
Sbjct: 49 SKTAKTIANLINSKPFSN-GLLSSLLITISKTTVLRTL-------RLIKDPS---KALRF 97
Query: 90 FKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRI 149
FK+T Q F+ TP+++ L IL R R + A + +++ + L+
Sbjct: 98 FKWT-QQKGFSHTPESYFIMLEILGRERNLNVARNFLFSIEKHSKGTVKLE--------- 147
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RF 208
DR FN L++++ KE+ +F + S
Sbjct: 148 -------------DRF---------------FNSLIRSYAEAGLFKESMKLFQTMKSIAV 179
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+P+ T N L+ + G + Y EM+ G P TYN+ I G+CK +
Sbjct: 180 SPSVVTFNSLMSILLKRGRTNMAKEVYDEMLGTYGVSPDTCTYNVLIRGFCKNSMVDEGF 239
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAYNAMIS 325
R F EME C + T TL+ G + AR L + M K+ L P++ Y +I
Sbjct: 240 RFFREMESFNCDADVVTYNTLVDGLCRAGKVRIARNLVNGMGKKCEGLNPNVVTYTTLIR 299
Query: 326 SLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFV 384
+++ A+ +++EM + + + +TY+T+ GL ++ L+ + + +RM +G F
Sbjct: 300 GYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERMKSDGGFS 359
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
P T T ++ C +D L ++ + + L+ LC +G ++ A
Sbjct: 360 PDTFTFNTIIHLHCCAGNLDEALKVFESMKKFRIPADSASYSTLIRSLCQKGDYDMA 416
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM- 308
+N I Y + G F ++M+LF+ M+ +A PS+ T +L+ + A++++DEM
Sbjct: 151 FNSLIRSYAEAGLFKESMKLFQTMKSIAVSPSVVTFNSLMSILLKRGRTNMAKEVYDEML 210
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ PD YN +I + ++ EME D VTY+T+ +
Sbjct: 211 GTYGVSPDTCTYNVLIRGFCKNSMVDEGFRFFREMESFNCDADVVTYNTL---------V 261
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
+G+C+ GK V R +V M C G P+ L
Sbjct: 262 DGLCR------AGK-VRIARNLVNGMGKKC-----------------EGLNPNVVTYTTL 297
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED-LDRM 482
+ G C + EEA ++M R + + +Y L + L +A+ +K++D L+RM
Sbjct: 298 IRGYCMKQEVEEALVVLEEMTSRGLKPNMITYNTLVKGLCEAHKLDKMKDVLERM 352
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 67/325 (20%), Positives = 126/325 (38%), Gaps = 45/325 (13%)
Query: 168 EIFVGIRKF----GSEEFNVLLQAFCTQKEMKEARSVFVKL------LSRFA--PNNKTM 215
++F ++KF S ++ L+++ C + + A +F +L LS+F P +
Sbjct: 383 KVFESMKKFRIPADSASYSTLIRSLCQKGDYDMAEQLFDELFEKEILLSKFGSKPLAASY 442
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N + E G E +++ RG + +Y I G+CK+G + L M R
Sbjct: 443 NPIFESLCEHGKTKKAERVIRQLMKRGTQDPQ-SYTTVIMGHCKEGAYESGYELLMWMLR 501
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR--C--- 330
LP ++ LI G A++ ++M K + +P ++++++ L+ C
Sbjct: 502 RDFLPDIEIYDYLIDGFLQKDKPLLAKETLEKMLKSSYQPKTSTWHSVLAKLLEKGCAHE 561
Query: 331 --------------RDLNAAMELMD-----EMEEKRIGHDNVTYHTMFFG--------LM 363
+++N + E + E E+ N+ Y ++ L+
Sbjct: 562 SSCVIVMMLEKNVRQNINLSTESLQLLFGREQHERAFEIINLLYKNGYYVKIEEVAQFLL 621
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K L CKL +E + C +V +L L++ G
Sbjct: 622 KRGKLSEACKLLLFSLENHQNVDIDLCNATILNLCKINKVSEAFSLCYELVENGLHQELT 681
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQM 448
LD L+ L G+ EEA SK++
Sbjct: 682 CLDDLIAALEEGGKREEAAFISKRL 706
>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
chloroplastic-like [Brachypodium distachyon]
Length = 757
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 4/314 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C E++EA+ + +++ S P+ T N L++ + E+
Sbjct: 339 YSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELT 398
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
++G P+V T+NI I+ CK G A+RLFEEM+ C P T LI +
Sbjct: 399 VKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLA 458
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L EM YN +I L + R + A E+ D+M+ IG + +T++T+
Sbjct: 459 KALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLI 518
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL + ++ +L D+MI P T ++ +C + ++ + GF
Sbjct: 519 DGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFE 578
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
L+ GLC R + A + + M ++ + + +Y + + L + N D
Sbjct: 579 VDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG---RDA 635
Query: 480 DRMIKNLQAVLPPP 493
+ + + V PP
Sbjct: 636 LSLFREMTEVGGPP 649
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 7/296 (2%)
Query: 181 FNVLLQAFCTQKEMKEA----RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
FN L+ A CT+ +++EA R + VK LS PN T NIL+ + GD +
Sbjct: 374 FNTLIVALCTENQLEEALDLARELTVKGLS---PNVYTFNILINALCKVGDPHLAVRLFE 430
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM G P VTYNI ID C G A+ L +EME C S T T+I G R
Sbjct: 431 EMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRR 490
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I +A ++FD+M + + +N +I L ++ A EL+D+M + + +NVTY+
Sbjct: 491 RIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYN 550
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
++ K + + M F T L+ C R L L + +
Sbjct: 551 SILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMK 610
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
G P A + ++ L +A ++M +Y+++ R L +
Sbjct: 611 GMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGG 666
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 87/371 (23%), Positives = 163/371 (43%), Gaps = 6/371 (1%)
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
AR++ FD A++L+S+ + + +L+ +++ + A+ M + GI
Sbjct: 136 ARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQ---GI 192
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAME 232
FN ++ A C ++ + A + ++ S AP+ T L+ GF E G + A
Sbjct: 193 EP-DVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAAL 251
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
M G P+ VT N+ I+GYCK G GDA+ ++ P T +T ++G
Sbjct: 252 RLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGL 311
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
++ A ++ M + +PD+ Y+ +I+ L +L A ++++M + D
Sbjct: 312 CQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDT 371
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
T++T+ L + LE L + P T +L+ C L + L+
Sbjct: 372 TTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEE 431
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
+ G P ++L+ LCS G+ +A + K+M V S +Y + L +
Sbjct: 432 MKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRR 491
Query: 473 NEKLEDL-DRM 482
E+ E++ D+M
Sbjct: 492 IEEAEEVFDQM 502
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 130/310 (41%), Gaps = 2/310 (0%)
Query: 178 SEEFNVLLQAFCTQKEMKEARS-VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
S NVL+ +C + +A + ++ F P+ T + + G ++G V
Sbjct: 266 SVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLG 325
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
M+ G P V TY+ I+ C G +A + +M CLP T TLI
Sbjct: 326 LMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTEN 385
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ +A L E+ + L P++ +N +I++L + D + A+ L +EM+ D VTY+
Sbjct: 386 QLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYN 445
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ L S L L M T T ++ C R++ ++ +
Sbjct: 446 ILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVT 505
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEK 475
G + + L+ GLC+ R ++A E QM+ Q + +Y +L Y Q N ++
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565
Query: 476 LEDLDRMIKN 485
+ L M N
Sbjct: 566 ADILQTMTAN 575
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 104/236 (44%), Gaps = 9/236 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C ++ ++EA VF ++ ++ N T N L+ G + + +M+
Sbjct: 479 YNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMI 538
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +P+ VTYN + YCK+G A + + M + T TLI+G R
Sbjct: 539 SEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQ 598
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L M + +KP AYN +I SL R + A+ L EM E D TY +F
Sbjct: 599 AALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDAFTYKIVF 658
Query: 360 FGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
GL + G ++ M + F+P+ + ML + L L + YLI
Sbjct: 659 RGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRMLAEGL-------LNLGMDDYLI 707
>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
subsp. lyrata]
Length = 568
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/349 (26%), Positives = 160/349 (45%), Gaps = 12/349 (3%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
F + L+ +V + S + +M++ + QS + ++ F+ M + FV GS
Sbjct: 74 FFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVP----GS 129
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
FN LL + F + + + + I++ G E+G++ E+
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLLVEL 189
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
GF P+VV Y IDG CK+G A LF EM + + + T T LIHG L +N
Sbjct: 190 REFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG--LFKNG 247
Query: 298 -IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD--LNAAMELMDEMEEKRIGHDNVT 354
Q +++++M + + P++ YN +++ C+D A +L DEM E+ + + VT
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ--HCKDGRTKDAFKLFDEMRERGVSCNIVT 305
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ GL + K+ D+M P T L+ FC ++ L+L L
Sbjct: 306 YNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
RG P ++LV+G C +G A + K+M R + S+ +Y +L
Sbjct: 366 SRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTIL 414
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/427 (21%), Positives = 176/427 (41%), Gaps = 53/427 (12%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P + F L + F+Q W + + L + S I++ + E++
Sbjct: 125 FVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIKVD--LDVYSFGIVIKGCCEAGEIEKS 182
Query: 159 LEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNN 212
+ + V +R+FG + L+ C + E+++A+ +F ++ +F N
Sbjct: 183 FD--------LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEM-GKFGLVANE 233
Query: 213 KTMNILLLG-FKESGDVTAMEMF----------------------------------YHE 237
T +L+ G FK EM+ + E
Sbjct: 234 WTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
M RG ++VTYN I G C++ +A ++ ++M+ P+L T TLI G V
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A L ++ R L P + YN ++S + D + A +++ EMEE+ I +TY
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ + +E +L M E P T +L+ FC+ +++ L+ ++ +
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLE 477
P+ + +V G C G A ++M + + ASYR + L + +++ E
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533
Query: 478 DL-DRMI 483
L ++MI
Sbjct: 534 GLVEKMI 540
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 106/208 (50%), Gaps = 5/208 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC ++ +A S+ L SR +P+ T NIL+ GF + GD + EM
Sbjct: 341 YNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEME 400
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG +PS +TY I ID + + A++L ME + P + T + LIHG + ++
Sbjct: 401 ERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMN 460
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYHT 357
+A +LF M + L+P+ YN M+ L C++ ++ A+ L EMEEK + + +Y
Sbjct: 461 EASRLFKLMVAKKLEPNKVIYNTMV--LGYCKEGSSYRALRLFREMEEKELPPNVASYRY 518
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVP 385
M L K + L ++MI+ P
Sbjct: 519 MIEVLCKERKSKEAEGLVEKMIDTGIDP 546
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 120/286 (41%), Gaps = 1/286 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K+A +F ++ R + N T N L+ G +M
Sbjct: 271 YNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMK 330
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+++TYN IDG+C G G A+ L +++ PSL T L+ G +
Sbjct: 331 SDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTS 390
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++ EM +R +KP Y +I + R ++ A++L MEE + D TY +
Sbjct: 391 GAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLI 450
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G + +L+ M+ K P ++ +C L L+ + ++
Sbjct: 451 HGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELP 510
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
P+ + ++ LC + +EA ++M+ S++ ++ R
Sbjct: 511 PNVASYRYMIEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLISR 556
>gi|255660798|gb|ACU25568.1| pentatricopeptide repeat-containing protein [Verbena intermedia]
Length = 418
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEENLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/257 (20%), Positives = 104/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ ++ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
FD M + V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NVLFDEMLDKGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM+++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 14/170 (8%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A E+ + Q P L+T ++ L + + +A D ++ I G++
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLKP-D 310
Query: 178 SEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+ L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKM 368
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 585
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 154/325 (47%), Gaps = 5/325 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S +I++ + K ++E F+ M + G+R F+ L+ C + + EA+
Sbjct: 239 SYNIIIDELCKIGKWKEAKRLFNEMVDQ---GVRP-DVVTFSALIDTLCKEGMVIEAKKF 294
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ R P+ T L+ GF GD+ + + + M +G+ P V++Y + I GYCK
Sbjct: 295 LETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCK 354
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+AM+L+ EM RV P ++T L+ G L + A++LF + + ++
Sbjct: 355 TFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYI 414
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+ + L + L AMEL +E++ + D +++ + GL K+ LE +L++++
Sbjct: 415 CSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLS 474
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
+ P T +++ FC N +VD L+ + + G P+ L+ G + E
Sbjct: 475 QEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLE 534
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQ 464
E + +M+ + ++ + Y +++
Sbjct: 535 EVVKLLHKMIQKDVSLAASIYTIVE 559
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/396 (23%), Positives = 176/396 (44%), Gaps = 24/396 (6%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSM 142
+AL+FF ++ + +F L LA+++++ Q + L H+ P+ TL
Sbjct: 79 QALQFFDLMMR------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTL--- 129
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+I+++ + E L A + R ++ + L++ C + + EA +F+
Sbjct: 130 NILINCLCNVNRVREGLSAMAGIMRRGYIP----DVVTYTSLIKGLCMEHRISEATRLFI 185
Query: 203 KLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG-------FRPSVVTYNIRI 254
++ PN T L+ G +G++ + + H+ +L G +P++ +YNI I
Sbjct: 186 RMQKLGCWPNVVTYGTLIKGLCRTGNIN-LALKLHQEMLNGTSPYAINCKPNIFSYNIII 244
Query: 255 DGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLK 314
D CK G + +A RLF EM P + T + LI + +A++ + M R +
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD+ + ++I DL++A EL M K D ++Y + +G K+ +E KL
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
Y+ M+ P +T +L+K + +V L+G + + + + + GLC
Sbjct: 365 YNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCK 424
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
G EA E ++ ++ S+ L L +A
Sbjct: 425 NGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKA 460
>gi|255660876|gb|ACU25607.1| pentatricopeptide repeat-containing protein [Verbena hastata]
Length = 484
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/466 (24%), Positives = 194/466 (41%), Gaps = 60/466 (12%)
Query: 68 LVENVLGRLFAAHSNGLK--ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
LV NVL HS+ AL+FF++ + F + K + IL R + A +
Sbjct: 14 LVYNVL------HSSNTSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCI 67
Query: 126 MSHVQRTHPSLLTLKSMSIM-LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVL 184
+ + + L + M +M + K +E+++ F +ME +G+ + + +N L
Sbjct: 68 LLDMPKK--GLEWDEDMWVMMIDSYGKEGIVQESVKMFQKMEE---LGVER-TIKSYNAL 121
Query: 185 LQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+ + A+ F K+LS P T N+++ GF SG V F+ +M R
Sbjct: 122 FKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREI 181
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P VVTYN I+GY + +A + F EM+ P++ T TTLI G V + A +
Sbjct: 182 SPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALR 241
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGL 362
L +EM +KP+ Y+ ++ L ++ A ++ EM +K + DN + +
Sbjct: 242 LVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSH 301
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG----- 417
KS L+ + MI + +L++ FC + D + L LI++
Sbjct: 302 CKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEKDIILRP 361
Query: 418 -----------------FCPHGH--------------------ALDLLVTGLCSRGRWEE 440
C +G AL+ L+ G G +
Sbjct: 362 QSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDS 421
Query: 441 AFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
AFE K ML R+ +++Y ++Q YL + + LD MI+N
Sbjct: 422 AFELLKIMLRRKVDSEKSAYNSLVQSYLKKNEPXDAKAALDSMIEN 467
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K+ N L G + ++++M+ G P+ T+N+ I G+ G A R FE+
Sbjct: 116 KSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFED 175
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ P + T T+I+G V+ + +A + F EM RN++P + Y +I +
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQ 235
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A+ L++EM+ I + +TY T+ GL + + + M++ P ++ M
Sbjct: 236 VDDALRLVEEMKGSGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFM 295
Query: 393 -LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSK 446
L+ C + +D ++ +I LL+ C G++++A + K
Sbjct: 296 RLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIEKFCKAGQYDKAVKLLDKLIEK 355
Query: 447 QMLVRRR---QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+++R + + +Y + YL K E L R + L P
Sbjct: 356 DIILRPQSTLHLEPNAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 403
>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Glycine max]
Length = 603
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 96/421 (22%), Positives = 183/421 (43%), Gaps = 30/421 (7%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
+++ L + + + NVL + KAL+ L+ P + L L
Sbjct: 164 IMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV----LERMSVAPDVVTYNTILRSL 219
Query: 114 ARMRYFDQAWELMS-HVQR-THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
+A E++ +QR +P ++T +I++ + ++ D M
Sbjct: 220 CDSGKLKEAMEVLDRQMQRECYPDVITY---TILIEATCNDSGVGQAMKLLDEM------ 270
Query: 172 GIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGF 222
RK G + +NVL+ C + + EA +K L+ PN T NI+L
Sbjct: 271 --RKKGCKPDVVTYNVLINGICKEGRLDEA----IKFLNNMPLYGCQPNVITHNIILRSM 324
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+G E +M+ +G PSVVT+NI I+ C+K G A+ + E+M + C+P+
Sbjct: 325 CSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNS 384
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
+ L+HG + + +A + + M R PDI YN ++++L + +AA+E++++
Sbjct: 385 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQ 444
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ K +TY+T+ GL K E +L + M P T L++ +
Sbjct: 445 LSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGK 504
Query: 403 VDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRM 462
VD + ++ + P + ++ GLC + A + M+ + + ++A+Y +
Sbjct: 505 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTI 564
Query: 463 L 463
L
Sbjct: 565 L 565
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 136/289 (47%), Gaps = 3/289 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N +L++ C ++KEA V + + R P+ T IL+ +SG AM++ EM
Sbjct: 212 YNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLL-DEM 270
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G +P VVTYN+ I+G CK+G +A++ M C P++ T ++
Sbjct: 271 RKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRW 330
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L +M ++ P + +N +I+ L R R L A++++++M + ++++Y+ +
Sbjct: 331 MDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPL 390
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G + ++ + + M+ P T L+ C + + D + + L +G
Sbjct: 391 LHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGC 450
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
P + ++ GL G+ E A E ++M + + +Y L R L
Sbjct: 451 SPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGL 499
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 99/216 (45%), Gaps = 1/216 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ C ++ + A V K+ PN+ + N LL GF + + + MV
Sbjct: 352 FNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMV 411
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P +VTYN + CK G A+ + ++ C P L T T+I G V
Sbjct: 412 SRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTE 471
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L +EM ++ LKPDI Y+ ++ L ++ A+++ +ME I VTY+ +
Sbjct: 472 YAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIM 531
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
GL K+ M+E P T +L++
Sbjct: 532 LGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIE 567
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/302 (24%), Positives = 133/302 (44%), Gaps = 7/302 (2%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ FC + ++A + L + A P+ T N+L+ G+ +SG++ M
Sbjct: 148 LIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---S 204
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P VVTYN + C G +AM + + + C P + T T LI + QA
Sbjct: 205 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAM 264
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+L DEM K+ KPD+ YN +I+ + + L+ A++ ++ M NV H +
Sbjct: 265 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGC-QPNVITHNIILRS 323
Query: 363 MKSSG-LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
M S+G +L M+ P T +L+ F C + +++ + G P+
Sbjct: 324 MCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPN 383
Query: 422 GHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKLEDLD 480
+ + L+ G C + + A E + M+ R +Y L L + A+ +E L+
Sbjct: 384 SLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILN 443
Query: 481 RM 482
++
Sbjct: 444 QL 445
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 129/282 (45%), Gaps = 16/282 (5%)
Query: 88 EFFKFTLQHPHFTPTPDAFEKTLHILARM----RYFDQAWELMSHVQR--THPSLLTLKS 141
E KF P + P+ + IL M R+ D A L++ + R PS++T
Sbjct: 297 EAIKFLNNMPLYGCQPNVITHNI-ILRSMCSTGRWMD-AERLLADMLRKGCSPSVVTF-- 352
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+I+++ + + + ++ ++M + + S +N LL FC +K+M A
Sbjct: 353 -NILINFLCRKRLLGRAIDVLEKMPKHGCMP----NSLSYNPLLHGFCQEKKMDRAIEYL 407
Query: 202 VKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++SR P+ T N LL + G A +++ +G P ++TYN IDG K
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKV 467
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A L EEM R P + T +TL+ G G + +A ++F +M ++KP Y
Sbjct: 468 GKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTY 527
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
NA++ L + + + A++ + M EK TY + G+
Sbjct: 528 NAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGI 569
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/254 (25%), Positives = 111/254 (43%), Gaps = 3/254 (1%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NI L +G++ F M+ +G P V+ I G+C+ G A R+ E +E
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
+P + T LI G I +A Q+ + M ++ PD+ YN ++ SL L
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AME++D ++ D +TY + SG+ KL D M + P T +L+
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C R+D + + G P+ ++++ +CS GRW +A ML +
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347
Query: 456 SEASYRMLQRYLVQ 469
S ++ +L +L +
Sbjct: 348 SVVTFNILINFLCR 361
>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 12/333 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQ 191
P++ T +L R K +E E F RM+ E G + + VL+ A C
Sbjct: 260 PNVYTFTICIRVLGRAGKI---DEAYEIFRRMDDE------GCGPDLVTYTVLIDALCNA 310
Query: 192 KEMKEARSVFVKLLSRFAPNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+++ A+ +FVK+ + ++ + I LL F + GD+ + F+ +M G+ P VVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
I +D CK F +A F+ M + LP+L T TLI G I A +L M
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMES 430
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
++P YN I + + A+E ++M+ K I + V + + L + L
Sbjct: 431 VGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+++ + E P + T M+MK + +VD +NL +I G P ++ L+
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L GR +EA++ +M + + +Y L
Sbjct: 551 SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 5/327 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
TL S + ++ + + E+ + F M+ VG + FN+LL ++ E
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKN---VGCAP-DAFTFNMLLAVHGKSGKITEL 842
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ +++SR P+ T NI++ +S ++ F++++V FRP+ TY IDG
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
K G +AMRLFEEM C P+ LI+G G + + A QLF M ++PD
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ +Y ++ L ++ A+ +E++ + D + Y+ + GL KS +E LY+
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M VP T LM + V+ ++ L G P + L+ G
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
E A+ K M+V + +Y L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 169/411 (41%), Gaps = 72/411 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P F + +L R D+A+E+ + + P L+T ++++ + E
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY---TVLIDALCNAGQLENA 316
Query: 159 LEAFDRM-------EREIFVGI-------------RKFGSE-----------EFNVLLQA 187
E F +M ++ I++ + ++F S+ F +L+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376
Query: 188 FCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C ++ EA + F V PN T N L+ G +G + M G +P+
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMER-------VACLPSLQTIT---------TLIH 290
TYNI ID + K G G A+ FE+M+ VAC SL ++ T+ +
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496
Query: 291 G---AGL----------------VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
G GL V + +A L EM + +PD+ N++I SL +
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A ++ D M++ ++ VTY+T+ GL K ++ +L++ MIE K P T +
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFN 616
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L+ FC N V+L L ++ + P + ++ GL + AF
Sbjct: 617 TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-- 129
++G L H KA + FK +++ P F L + + + +EL +
Sbjct: 794 LIGELLEVHYTE-KAWDLFK-DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAF 188
+R P +T +I++S ++K + ++ L+ F D + + R +G L+
Sbjct: 852 RRCKPDAITY---NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP-----LIDGL 903
Query: 189 CTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
++EA +F ++ S + PN NIL+ G+ + GD + MV G RP
Sbjct: 904 AKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ +Y I +D C G +A+ F E++ P +I+G G + + +A L++
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R + PD+ YN+++ +L + A + +E++ + D TY+ + G S
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVML 393
E +Y M+ P T L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 149/352 (42%), Gaps = 7/352 (1%)
Query: 134 PSLL-TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
P++L T ++ + ML + E+ F+ M+++I IR+ + + + +A +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKI---IRR-DLDTYLTIFKALSIRG 171
Query: 193 EMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+++ +V K+ + F N + N L+ +SG Y MV G +PS+ TY+
Sbjct: 172 GLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYS 231
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ KK M L +EME + P++ T T I G I +A ++F M
Sbjct: 232 ALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE 291
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
PD+ Y +I +L L A EL +M+ D V Y T+ L+
Sbjct: 292 GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTF 351
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ + +M ++P T +L+ C D + + +G P+ H + L+ G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRM 482
L GR E+A + M Q + +Y + Y ++ K +E ++M
Sbjct: 412 LLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 111/519 (21%), Positives = 194/519 (37%), Gaps = 100/519 (19%)
Query: 41 NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFT 100
N H PDQ ++ TLL N G L + F ++ +
Sbjct: 326 NGHK-PDQVIYITLLDKF------------NDFG--------DLDTFKEFWSQMEADGYM 364
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P F + +L + R FD+A+ V R L L + + ++ + + E+ L+
Sbjct: 365 PDVVTFTILVDVLCKARDFDEAFATFD-VMRKQGILPNLHTYNTLICGLLRAGRIEDALK 423
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
ME VG++ + +N+ + F E +A F K+ ++ PN N L
Sbjct: 424 LLGTMES---VGVQP-TAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASL 479
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
E G + + ++ + G P VTYN+ + Y K G +A+ L EM R C
Sbjct: 480 YSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCE 539
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P + + +LI + +A Q+FD M L P + YN ++S L + + A+EL
Sbjct: 540 PDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIEL 599
Query: 340 MDEMEEKRIGHDNV-----------------------------------TYHTMFFGLMK 364
+ M EK+ + + TY+T+ +GL+K
Sbjct: 600 FESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIK 659
Query: 365 SSGLE------------------GVCKLYDRMIE----GKFVPKTRTVVMLMKF------ 396
+ + +C L +++ G + R + ++F
Sbjct: 660 ENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSF 719
Query: 397 -------FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
V +D + L+ G C L LV LC R A++ +
Sbjct: 720 WEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK-F 778
Query: 450 VRRRQVSE--ASYRMLQRYLVQANANEKLEDLDRMIKNL 486
++ +S ASY L L++ + EK DL + +KN+
Sbjct: 779 TKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 93/453 (20%), Positives = 174/453 (38%), Gaps = 57/453 (12%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+ F KA+E F+ ++ P A +L+ LA M +A + + ++
Sbjct: 441 NIFIDYFGKSGETGKAVETFE-KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLR 499
Query: 131 RT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVL 184
P +T ++M+ SK +E + M R G E N L
Sbjct: 500 ENGLAPDSVTY---NMMMKCYSKVGQVDEAVNLLSEMIRN--------GCEPDVIVVNSL 548
Query: 185 LQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
+ + + EA +F ++ + +P T N LL G + G V + M+ +
Sbjct: 549 IDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKC 608
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P+ +++N +D +CK A+++F +M + C P + T T+I+G ++ A
Sbjct: 609 SPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFW 668
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM-DEMEEKRIGHDNVTYHTMFFGL 362
F ++ K+++ PD ++ L++C + A+ + D M + R + + + G
Sbjct: 669 FFHQL-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGT 727
Query: 363 MKSSG------------LEGVCK------------------LYDRMIEGKFVPKTRTVVM 392
+ + L G+C+ LY I KF K
Sbjct: 728 LVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPT 787
Query: 393 LMKFFCVN---FRVDLGLNLWGYLIDR---GFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
L + C+ V W D G P ++L+ G+ E FE K
Sbjct: 788 LASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYK 847
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+M+ RR + +Y ++ L ++N +K D
Sbjct: 848 EMISRRCKPDAITYNIVISSLAKSNNLDKALDF 880
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF--RPSVVTYNIRIDGYCKKGCFG 264
RF N L+ G ++ +F E+VL G S + +R+ CK
Sbjct: 712 RFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV--LCKHKREL 769
Query: 265 DAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++F++ +++ P+L + LI V +A LF +M PD +N +
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
++ + + EL EM +R D +TY+ + L KS+ L+ + ++ F
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P RT L+ R++ + L+ + D G P+ ++L+ G G E A +
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M+ + SY +L L A
Sbjct: 950 LFKRMVNEGIRPDLKSYTILVDCLCLA 976
>gi|255660912|gb|ACU25625.1| pentatricopeptide repeat-containing protein [Mulguraea aspera]
Length = 481
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 187/446 (41%), Gaps = 52/446 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FF++ + F + K + IL R + A ++ + + L + M +M
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK--GLEWDEDMWVM 85
Query: 146 -LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ K +E+++ FDRME +G+ + + ++ L + + A+ F K+
Sbjct: 86 MIDSYGKQGIVQESVKLFDRMEE---LGVER-TIKSYDALFKVILRRGRYMMAKRYFNKM 141
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
LS P T N+L+ GF SG V F+ +M R P VVTYN I+GY +
Sbjct: 142 LSEGIEPTRHTFNVLIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKM 201
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + F EM+ P++ T TTLI G V + A +L +EM +KP+ Y+ +
Sbjct: 202 XEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTL 261
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L ++ A ++ EM +K + DN + + KS L+ + MI
Sbjct: 262 LPGLCNAEKMSEARSILKEMMDKYLAPTDNSIFMRLITSQCKSGHLDAASDVLKAMIRLS 321
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG----------------------FCP 420
+ +L++ FC + D + L +I++ C
Sbjct: 322 VPTEAGHYGVLIENFCKAGQYDQAVKLLDKVIEKDIILRPQSTLHLEPSAYNPMIEYLCN 381
Query: 421 HGH--------------------ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+G AL+ L+ G G + AFE K ML R+ +++Y
Sbjct: 382 NGQAAKAETLVRQLLKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 461 -RMLQRYLVQANANEKLEDLDRMIKN 485
++Q YL + + LD MI+N
Sbjct: 442 DSLVQSYLKKNEPADAKAALDSMIEN 467
>gi|449455956|ref|XP_004145716.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
gi|449492939|ref|XP_004159147.1| PREDICTED: pentatricopeptide repeat-containing protein At5g16420,
mitochondrial-like [Cucumis sativus]
Length = 535
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 109/475 (22%), Positives = 192/475 (40%), Gaps = 56/475 (11%)
Query: 59 PQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ-HPHFTPTPDAFEKTLHILARMR 117
P P L N L + N AL+ F + + HP FT D + ++ L+R R
Sbjct: 41 PPIKPWPQRLFPNRLVAMIRRQQNLDLALQIFHYAGKYHPAFTHNYDTYHAIIYRLSRAR 100
Query: 118 YFDQAWELMSHVQRTHPSLLTLKSMSIMLSR---ISKFQSYEETLEAFDRMEREIFVGIR 174
F+ L LL L+ I S I+ +SY L + +M + F+ I+
Sbjct: 101 AFEPVESL----------LLELQDSGINCSEDLFITVIRSY--GLASRPKMALKTFLRIQ 148
Query: 175 KFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDV 228
FG N LL A +F S+F PN T NIL+ + DV
Sbjct: 149 TFGVRRSVRSLNTLLNALVQNNRFSSVHLLFKYSKSKFGVVPNVFTCNILIKALCKKNDV 208
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
+ EM G P+VVTY + GY +G A R+F E+ LP T T L
Sbjct: 209 EGARKVFDEMPSMGIVPNVVTYTTILGGYVSRGDMIGAKRVFGELFDHGWLPDATTYTIL 268
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G A ++ DEM + ++P+ Y +I + R A+ L+++M EK+
Sbjct: 269 MDGYVKQGRFTDAVKVMDEMEENGVEPNDITYGVIILGYCKERKSGEALNLLNDMLEKKY 328
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV----- 403
++ + L ++ CK+++++++ P L+ + C +
Sbjct: 329 IPNSALCCKVIDVLCGEGRVKEACKMWEKLLKKNCTPDNAITSTLIHWLCKEGNIWEARK 388
Query: 404 ------------------------DLG-----LNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++G LW ++++G P+ ++L+ G
Sbjct: 389 LFNEFERGTISSLLTYNTLIAGMCEMGELCEAARLWDDMLEKGCVPNEFTYNMLIKGFLK 448
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAV 489
G+ +E + ++ML + ++E++Y +L L++ E+L ++ MI + AV
Sbjct: 449 VGKAKEVIKVVEEMLDKGCLLNESTYLILVEGLLKLGKREELLNILSMIISSGAV 503
>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
chloroplastic-like [Vitis vinifera]
Length = 746
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 198/479 (41%), Gaps = 58/479 (12%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
T++ + + R+IN P+ + L +L + P LS T V L + K
Sbjct: 59 AATKTKRSQAMARLINTEPWSHE-LQSSLAELAPS---LSKTTVLQTLQLI----RTPAK 110
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL FF++ ++ FT ++ + IL R R + A + +++
Sbjct: 111 ALHFFRW-VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSG----------- 158
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
G K G FN L++++ +E+ VF +
Sbjct: 159 --------------------------GAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGCF 263
+P+ T N LL + G + + + EM+ G P T+NI I G+C
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAYN 321
+ F+EM R C P + T TL+ G + A + M K+ NL P++ Y
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-E 380
+I +D+ A+ L+ EM + + + +TY+T+ GL ++ L+ + ++ + M+ +
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG---R 437
G F+P T T+ L+K C +++ +++ + + P +LV LC RG R
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 438 WEEAFE--CSKQMLVRRRQVSE--ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
EE F+ K++L+ A+Y + YL +K E + R + PP
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP 491
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 90/209 (43%), Gaps = 11/209 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N L++A CT +++EA SVF K+ R P++ T ++L+ + GD E F+ E+
Sbjct: 382 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 441
Query: 240 LR-------GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE-MERVACLPSLQTITTLIHG 291
+ G +P V YN + C G A R+F + M+R P + TLI G
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP--SYKTLILG 499
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
L M +R+ PD Y MI L++ D A + +++M +
Sbjct: 500 HCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPT 559
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+H++ L++ L M+E
Sbjct: 560 TAIFHSILAALVEKGCAHESASLVKLMLE 588
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 92/201 (45%), Gaps = 13/201 (6%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIF---VGIRKFGS 178
+E MS + R P T S+++ + + + E FD + E+EI VG + +
Sbjct: 402 FEKMSEL-RVQPDSATY---SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVA 457
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N + + C+ + K+A VF +L+ R + + L+LG G A M
Sbjct: 458 A-YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLM 516
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
+ R F P TY + IDG KKG A + E+M + + LP+ +++ A LV
Sbjct: 517 LRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSIL--AALVEKG 574
Query: 298 -IHQARQLFDEMPKRNLKPDI 317
H++ L M +R ++ +I
Sbjct: 575 CAHESASLVKLMLERRIRQNI 595
>gi|224117008|ref|XP_002317451.1| predicted protein [Populus trichocarpa]
gi|222860516|gb|EEE98063.1| predicted protein [Populus trichocarpa]
Length = 461
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 114/433 (26%), Positives = 184/433 (42%), Gaps = 41/433 (9%)
Query: 43 HPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGR--LFAAHSNGLKALEFFKFTLQHPHFT 100
+P P P P + + LS L+ LGR +F L L+ + FT
Sbjct: 31 NPNPKTPSKPF------RYSLLSYDLIITKLGRAKMFNEMQEILAQLK------EETLFT 78
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSH-----VQRTHPSLLTLKSMSIMLSRISKFQSY 155
P F ++ R R + A +L+ VQRT S +L S+ +M
Sbjct: 79 PKEALFCDIINFYGRARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMC--------- 129
Query: 156 EETLEAFDRMEREIFVGIRKFGSEE---FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
+ FD+M RE+FVGI K G + +N+L++ FC + +A VF ++ +R +PN
Sbjct: 130 ----KDFDKM-RELFVGIEKLGKADACTYNLLIRGFCASGRLDDASKVFDEMTNRGVSPN 184
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR--PSVVTYNIRIDGYCKKGCFGDAMRL 269
T L+ GF + +MV + +R P+ Y I G CK G A RL
Sbjct: 185 VITFGNLIYGFCLHLRLKEAFKLKTDMV-KVYRVYPNAYIYASLIKGVCKNGELSLAFRL 243
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+EM R +TLI G +A ++++M +R KPD YN +I+ +
Sbjct: 244 KKEMIRNKIELDPAIYSTLISGLFKAGRKEEALGVWEDMKERGYKPDTVTYNVIINLFCK 303
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+D AA L+DEM EK D ++Y+ + L + L++ M P +
Sbjct: 304 DKDFEAAYRLLDEMVEKGCKPDVISYNVILRELFEEGKRGEANDLFEDMPRRGCAPDVVS 363
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+L FC + + +I +GF P ++ V LC G+ E+ + L
Sbjct: 364 YRILFDGFCNGMQFKEAAFILDEMIFKGFVPCSASICKFVNRLCE-GKNEDLLRSAFNTL 422
Query: 450 VRRRQVSEASYRM 462
+ + V+ +RM
Sbjct: 423 EKGKLVNVDLWRM 435
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/336 (23%), Positives = 151/336 (44%), Gaps = 10/336 (2%)
Query: 132 THPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE--FNVLLQAFC 189
+ P +L S ++++++ + + + E E +++ E F +E F ++ +
Sbjct: 38 SKPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETL-----FTPKEALFCDIINFYG 92
Query: 190 TQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ + A + V+L S R K+ N LL F D M + + G +
Sbjct: 93 RARLPENALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIEKLG-KADAC 151
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TYN+ I G+C G DA ++F+EM P++ T LI+G L + +A +L +M
Sbjct: 152 TYNLLIRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDM 211
Query: 309 PK-RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
K + P+ Y ++I + + +L+ A L EM +I D Y T+ GL K+
Sbjct: 212 VKVYRVYPNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGR 271
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
E +++ M E + P T T +++ FC + + L ++++G P + ++
Sbjct: 272 KEEALGVWEDMKERGYKPDTVTYNVIINLFCKDKDFEAAYRLLDEMVEKGCKPDVISYNV 331
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
++ L G+ EA + + M R SYR+L
Sbjct: 332 ILRELFEEGKRGEANDLFEDMPRRGCAPDVVSYRIL 367
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 107/239 (44%), Gaps = 7/239 (2%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIH 299
+ FR S+++Y++ I + F + + ++ E P +I+ G R
Sbjct: 39 KPFRYSLLSYDLIITKLGRAKMFNEMQEILAQLKEETLFTPKEALFCDIINFYGRARLPE 98
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH-DNVTYHTM 358
A +L E+P ++ + +YN+++S + C+D + EL +E ++G D TY+ +
Sbjct: 99 NALKLLVELPSFRVQRTVKSYNSLLSVFLMCKDFDKMRELFVGIE--KLGKADACTYNLL 156
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID--R 416
G S L+ K++D M P T L+ FC++ R+ L ++ R
Sbjct: 157 IRGFCASGRLDDASKVFDEMTNRGVSPNVITFGNLIYGFCLHLRLKEAFKLKTDMVKVYR 216
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ P+ + L+ G+C G AF K+M+ + ++ A Y L L +A E+
Sbjct: 217 VY-PNAYIYASLIKGVCKNGELSLAFRLKKEMIRNKIELDPAIYSTLISGLFKAGRKEE 274
>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
Length = 545
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/353 (25%), Positives = 156/353 (44%), Gaps = 13/353 (3%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
S G ++ + F F+P ++ + L + R D+A L + + +P ++T
Sbjct: 183 SGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVT 242
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
++ L + + + EA+D E G +N ++ C ++ A
Sbjct: 243 YGALIDGLGKQRRVK------EAYDLFEEARAKGCHP-TVVTYNTMIDGLCKCGRIENAL 295
Query: 199 SVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+++ ++ P+ T + L+ G S Y EM+ G P VVTYN +DG
Sbjct: 296 TLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDG 355
Query: 257 YCKKGCFGDAMRLFEEME-RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
CK GC AM +F +M C P++ T T LI V + A +L EM R+L P
Sbjct: 356 LCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLP 415
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
D + +I L + ++ A EL + + K D+V ++TM G K + ++ KL+
Sbjct: 416 DAVTFTTVIQKLCKESRIDEAHELFESIG-KTCKPDSVLFNTMLAGYCKITRIDDAKKLH 474
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
DRM++ P T L+ FC R L ++ +I+ GF P H +L+
Sbjct: 475 DRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELV 527
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/350 (25%), Positives = 154/350 (44%), Gaps = 12/350 (3%)
Query: 102 TPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEA 161
PD K +H R+ + AWE+ + + + +LS K + E+
Sbjct: 68 VPDLVGKVIH---RIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLF 124
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLG 221
F + +F + +N L+ F ++K+A ++F ++ ++ NI+L G
Sbjct: 125 FQSHMKNVF----EPDEVSYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLRSHNIVLRG 180
Query: 222 FKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G ++ A E+F + F P++++Y I IDG CK A+ LF++M A P
Sbjct: 181 LCSGGKISMAWEVFKDMSGI--FSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYP 238
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T LI G G R + +A LF+E + P + YN MI L +C + A+ L
Sbjct: 239 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 298
Query: 341 DEM-EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
D+M E + D TY + GL S+ E +LY+ M++ P T L+ C
Sbjct: 299 DDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCK 358
Query: 400 NFRVDLGLNLWGYLIDRGFC-PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ D + ++ + C P+ +L+ C R +A + +K+M
Sbjct: 359 SGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEM 408
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 110/455 (24%), Positives = 180/455 (39%), Gaps = 81/455 (17%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM- 126
LV +++G++ + A E F++ + FT L + + R + A
Sbjct: 67 LVPDLVGKVIHRIPDPNTAWEVFQWAGKQSKFTHNRFTCNNLLSVYVKARRVEDAHLFFQ 126
Query: 127 SHVQRT-HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLL 185
SH++ P + S + +++ K ++ L F M+ +R N++L
Sbjct: 127 SHMKNVFEPDEV---SYNTLMNGFFKAGDVKKALALFGEMKDSGIAVLR-----SHNIVL 178
Query: 186 QAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ C+ ++ A VF + F+PN + I++ G +S V + +MV + P
Sbjct: 179 RGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYP 238
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
VVTY IDG K+ +A LFEE C P++ T T+I G I A L+
Sbjct: 239 DVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLY 298
Query: 306 DEMPKR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
D+M + +LKPD+ Y+A+I+ L A EL +EM + D VTY+T+ GL K
Sbjct: 299 DDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCK 358
Query: 365 SS------------GLEGVCK--------LYDRM---------------IEGK-FVPKTR 388
S G+ VC L DR +EG+ +P
Sbjct: 359 SGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAV 418
Query: 389 TVVMLMKFFCVNFRVDLGLNLW-------------------GY---------------LI 414
T +++ C R+D L+ GY ++
Sbjct: 419 TFTTVIQKLCKESRIDEAHELFESIGKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRML 478
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
D G P LVTG C GR+ +A +M+
Sbjct: 479 DSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMI 513
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 126/305 (41%), Gaps = 41/305 (13%)
Query: 175 KFGSEEF--NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
KF F N LL + + +++A F + F P+ + N L+ GF ++GDV
Sbjct: 97 KFTHNRFTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKA 156
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
+ EM G + ++NI + G C G A +F++M + P+L + T +I G
Sbjct: 157 LALFGEMKDSGI-AVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFS-PNLISYTIMIDG 214
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
R + +A LF +M + + PD+ Y A+I L + R + A +L +E K
Sbjct: 215 LCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPT 274
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
VTY+TM GL K +E LYD M+ E P T L+ GLNL
Sbjct: 275 VVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALIN----------GLNL- 323
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
R E+A+E ++ML +Y L L ++
Sbjct: 324 ------------------------SNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKS 359
Query: 471 NANEK 475
+K
Sbjct: 360 GCEDK 364
>gi|225464138|ref|XP_002265372.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46100
[Vitis vinifera]
gi|296087974|emb|CBI35257.3| unnamed protein product [Vitis vinifera]
Length = 503
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 12/291 (4%)
Query: 210 PNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ ++N+L+ K SG + A + EM RG P TY I+G C+ G G+A
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCRLGKIGEAKE 212
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
LF+EME AC P++ T T+LIHG +++ A +L +EM + +KP++ Y++++
Sbjct: 213 LFKEMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEMASKGIKPNVFTYSSLMDGHC 272
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ + A+EL+D M +R + +TY T+ GL K L+ ++ DRM P
Sbjct: 273 KSGCSSRALELLDMMVSRRHLPNMITYSTLVHGLCKEGKLQEAVEILDRMKLQGLRPDAG 332
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP-------HGHALDLLVTGLCSRGRWEEA 441
++ FC + N ++ G P H +++V GLC+ A
Sbjct: 333 LYGKIISGFCDICKFHEAANFLDEMVLGGISPNRLTWSLHVRIHNIVVQGLCTE-HPNRA 391
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRMIKNLQAVLP 491
F+ M R + ++ L Y K L D M+ L +P
Sbjct: 392 FQLYLSMRTRGISIDAKTFDSLVNYFCNKGDLHKAAHLVDEMV--LDGCIP 440
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 76/359 (21%), Positives = 142/359 (39%), Gaps = 47/359 (13%)
Query: 14 PGISDRLALLFSTTTQSSEIERITRIINDHPF----PDQPLHPTLLQHLPQTTPLSSTLV 69
P ++ L+ + S ++ RI + P PD + TL+ L +
Sbjct: 153 PSVASLNVLIKALCKNSGTMDAALRIFREMPNRGCPPDSYTYGTLINGLCR--------- 203
Query: 70 ENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV 129
LG++ A E FK ++ +PT + +H L + + D A L+ +
Sbjct: 204 ---LGKIGEAK-------ELFK-EMETKACSPTVVTYTSLIHGLCQSKDLDSAIRLLEEM 252
Query: 130 --QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE-EFNVLLQ 186
+ P++ T S+ + K LE D M V R + ++ L+
Sbjct: 253 ASKGIKPNVFTYSSL---MDGHCKSGCSSRALELLDMM-----VSRRHLPNMITYSTLVH 304
Query: 187 AFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + +++EA + ++ L P+ ++ GF + F EMVL G P
Sbjct: 305 GLCKEGKLQEAVEILDRMKLQGLRPDAGLYGKIISGFCDICKFHEAANFLDEMVLGGISP 364
Query: 246 SVVTY-------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +T+ NI + G C + A +L+ M +T +L++ ++
Sbjct: 365 NRLTWSLHVRIHNIVVQGLCTEH-PNRAFQLYLSMRTRGISIDAKTFDSLVNYFCNKGDL 423
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE---MEEKRIGHDNVT 354
H+A L DEM PD +NA++ + R + + EL+ +E +++G DN
Sbjct: 424 HKAAHLVDEMVLDGCIPDEVTWNAVVCAFWDRRKVRESAELVQVELMVEHRKMGPDNTN 482
>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Vitis vinifera]
Length = 539
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/377 (22%), Positives = 169/377 (44%), Gaps = 14/377 (3%)
Query: 99 FTPTPDAFEKTLHI--LARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQS 154
F PD + T+ I + D A +++ + + P T ++ L + K
Sbjct: 85 FGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIG- 143
Query: 155 YEETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
E L+ FD+M E F + +G+ L+ C +++ EA ++F +++++ +P+
Sbjct: 144 --EALDVFDKMVGEGFQPNVVTYGT-----LMNGLCKDRQLTEALNLFSEMIAKGISPDI 196
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N L+ + + +EMV P+VV+ NI +D CK+G +A + +
Sbjct: 197 FTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDM 256
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M + P + T L+ G L + +A ++FD M + ++ +YN +I+ + +
Sbjct: 257 MIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQR 316
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ AM L +EM + + + +TY T+ GL L+ L++ M+ +P T +
Sbjct: 317 IDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSI 376
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
L+ + C N R+ + L + P ++ + G+C G E A + + R
Sbjct: 377 LLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRG 436
Query: 453 RQVSEASYRMLQRYLVQ 469
Q ++ ++ R L +
Sbjct: 437 LQPDVWTHNIMIRGLCK 453
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/430 (22%), Positives = 182/430 (42%), Gaps = 21/430 (4%)
Query: 55 LQHLPQTTPLSSTLVEN--VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHI 112
L H P T + TLV V+G++ +AL+ F + F P + ++
Sbjct: 120 LGHQPDTATFT-TLVRGLCVVGKIG-------EALDVFD-KMVGEGFQPNVVTYGTLMNG 170
Query: 113 LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L + R +A L S + + P + T S+ L + +++ L + ++ +I
Sbjct: 171 LCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLLN--EMVKSKIM 228
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVT 229
+ N+++ A C + ++ EA V ++ P+ T L+ G ++
Sbjct: 229 PNVVSL-----NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMD 283
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ MV G +VV+YN I+GYCK AM LFEEM R +P+ T +TLI
Sbjct: 284 EAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLI 343
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
HG V + A LF+EM P++ Y+ ++ L + L AM L+ +E +
Sbjct: 344 HGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLD 403
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D Y+ G+ ++ LE L+ + P T ++++ C +D L
Sbjct: 404 PDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKL 463
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ + + G +G + + GL + A + ++ML R ++ +L + L
Sbjct: 464 FREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSD 523
Query: 470 ANANEKLEDL 479
++ ++ +
Sbjct: 524 DGLDQSVKQI 533
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 134/308 (43%), Gaps = 15/308 (4%)
Query: 147 SRISKFQSYEETLEAFDRMER-----EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
S+ F + ++ L +F RM IF EF LL + K S+
Sbjct: 29 SKSLHFNTLDDALSSFHRMLHMHPPPPIF---------EFAKLLTSIAKMKHYSTVLSLS 79
Query: 202 VKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
K+ S P+ T+ I++ F V +++ G +P T+ + G C
Sbjct: 80 KKMDSFGIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVV 139
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G G+A+ +F++M P++ T TL++G R + +A LF EM + + PDI Y
Sbjct: 140 GKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTY 199
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
N++I +L + L++EM + +I + V+ + + L K + + D MI+
Sbjct: 200 NSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
G P T LM C+ +D + ++ ++ G + + + L+ G C R ++
Sbjct: 260 GGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDK 319
Query: 441 AFECSKQM 448
A ++M
Sbjct: 320 AMYLFEEM 327
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/223 (20%), Positives = 93/223 (41%), Gaps = 5/223 (2%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ F M + P + L+ +++ L +M + PD+ +I
Sbjct: 39 DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGH--DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+S ++ A+ ++ ++ ++GH D T+ T+ GL + ++D+M+
Sbjct: 99 NSFCHLNRVDFALSVLAKI--LKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG 156
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
F P T LM C + ++ LNL+ +I +G P + L+ LC+ W+
Sbjct: 157 FQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVT 216
Query: 443 ECSKQMLVRRRQVSEASYRMLQRYLV-QANANEKLEDLDRMIK 484
+M+ + + S ++ L + E + +D MI+
Sbjct: 217 TLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQ 259
>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
[Vitis vinifera]
Length = 691
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 5/399 (1%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
L +P+ N+L F + L A E ++ L+ P P ++ ++ L
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 265
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ FD+++E+ H + + L + S ++ + L+ R+ +E+
Sbjct: 266 CKCGKFDESFEIW-HRMKKNERGQDLYTYSTLIHGLCG----SGNLDGATRVYKEMAENG 320
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
+N +L + ++E ++ + + NIL+ G E+ V
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAIS 380
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ + + +TY + + G CK G A+ + EE E +++I+G
Sbjct: 381 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + D+M K KP+ NA+I+ +R L A+ M K V
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ GL K+ L M+ + P T +LM C ++D+ LNLW
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+++GF P ++++ GLCS G+ E+A + +M R+
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 49/430 (11%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
SN E F + +P + + I R + FD+A EL++ + Q P +
Sbjct: 127 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF- 185
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
S +++ ++K + L+ FD M ER + + + N+L+ F + ++ A
Sbjct: 186 --SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY-----NILIDGFFKKGDILNA 238
Query: 198 RSVFVKLLS--RFAPNNKTMNILLLG------FKES------------------------ 225
++ +LL PN + N+++ G F ES
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298
Query: 226 -----GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G++ Y EM G P VV YN ++GY + G + + L++ ME+ C
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-R 357
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ + LI G + +A +++ +P+++ D Y ++ L + LN A+ ++
Sbjct: 358 TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+E E R D Y +M GL + L+ V + D+M + P ++ F
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+++ L +G ++ +G P + L+ GL R+ EA+ K+ML + + + +Y
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Query: 461 RMLQRYLVQA 470
+L L Q
Sbjct: 538 SLLMNGLCQG 547
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 61/257 (23%), Positives = 118/257 (45%), Gaps = 1/257 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C + + E V ++ PN N ++ GF + + F+ MV
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV 491
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+VVTYN I+G K F +A L +EM P++ T + L++G + +
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L+ + ++ KPD+ +N +I L + A++L EM++++ + VT++T+
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K E K++D +++ P + + +K C R+ + +DRG
Sbjct: 612 EGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 671
Query: 420 PHGHALDLLVTGLCSRG 436
P ++LV + G
Sbjct: 672 PTAITWNILVRAVLDNG 688
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/189 (24%), Positives = 100/189 (52%), Gaps = 1/189 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ + EA ++ ++L + + PN T ++L+ G + + + + +
Sbjct: 502 YNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQAL 561
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF+P V +NI I G C G DA++L+ EM++ C+P+L T TL+ G VR+
Sbjct: 562 EKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFE 621
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +++D + + +PDI +YN + L C ++ A+ +++ ++ + +T++ +
Sbjct: 622 RASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILV 681
Query: 360 FGLMKSSGL 368
++ + L
Sbjct: 682 RAVLDNGAL 690
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P + + ++ K S A+++F + G +P + +YN ++ + + +A
Sbjct: 76 CPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
F E + P+LQT LI + + +A++L + M ++ PD+ +Y +I+SL
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKT 387
+ ++ A++L DEM E+ + D Y+ + G K + ++++R+++G V P
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
+ +++ C + D +W + + L+ GLC G + A K+
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 448 MLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
M Y ML YL E LE
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
>gi|255660790|gb|ACU25564.1| pentatricopeptide repeat-containing protein [Verbena hispida]
Length = 418
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 149/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE LE ++ FN+L+ F + E++ A+SVF +
Sbjct: 124 ---------YEENLEC--GYPASLYF---------FNILMHGFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANVLFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 125/260 (48%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + G+ K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEENLECGYPASLYFFNILMHGFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 IMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 105/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ ++ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLNEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
FD M + V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NVLFDEMLDKGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM+++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + KP +
Sbjct: 400 GSKLLKEMQRDGYKPSV 416
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 14/170 (8%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
D A E+ + Q P L+T ++ L + + +A D ++ I G++
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLKP-D 310
Query: 178 SEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+ L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 311 KITYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKM 368
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R PS+ T
Sbjct: 369 LREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
Length = 718
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 110/479 (22%), Positives = 198/479 (41%), Gaps = 58/479 (12%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
T++ + + R+IN P+ + L +L + P LS T V L + K
Sbjct: 59 AATKTKRSQAMARLINTEPWSHE-LQSSLAELAPS---LSKTTVLQTLQLI----RTPAK 110
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL FF++ ++ FT ++ + IL R R + A + +++
Sbjct: 111 ALHFFRW-VEAKGFTHNEQSYFLMIEILGRSRNLNAARNFVFSIEKKSG----------- 158
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
G K G FN L++++ +E+ VF +
Sbjct: 159 --------------------------GAVKLGDRFFNSLIRSYGWAGLFQESIKVFKTMK 192
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV-LRGFRPSVVTYNIRIDGYCKKGCF 263
+P+ T N LL + G + + + EM+ G P T+NI I G+C
Sbjct: 193 EIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMV 252
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR--NLKPDIGAYN 321
+ F+EM R C P + T TL+ G + A + M K+ NL P++ Y
Sbjct: 253 DEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYT 312
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI-E 380
+I +D+ A+ L+ EM + + + +TY+T+ GL ++ L+ + ++ + M+ +
Sbjct: 313 TLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGD 372
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG---R 437
G F+P T T+ L+K C +++ +++ + + P +LV LC RG R
Sbjct: 373 GGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRR 432
Query: 438 WEEAFE--CSKQMLVRRRQVSE--ASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPP 492
EE F+ K++L+ A+Y + YL +K E + R + PP
Sbjct: 433 AEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPP 491
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/393 (21%), Positives = 150/393 (38%), Gaps = 60/393 (15%)
Query: 102 TPDAFEKTLHILAR----MRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSY 155
TPD + T +IL R D+ + + R P ++T ++ L R K +
Sbjct: 233 TPDTY--TFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGKVKIA 290
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
++ + + + + L++ +C +++M EA S+ +++SR PN T
Sbjct: 291 HNVVKGMVKKSPNLSPNVVTY-----TTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKIT 345
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRG-FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
N L+ G E+ + ++ MV G F P T N I +C G +A +FE+M
Sbjct: 346 YNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKM 405
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL-------KPDIGAYNAMISS 326
+ P T + L+ + +A + FDE+ ++ + KP + AYN M
Sbjct: 406 SELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEY 465
Query: 327 LI--------------------------------RCRDLN--AAMELMDEMEEKRIGHDN 352
L CR+ A +L+ M + D
Sbjct: 466 LCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDA 525
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT----RTVVMLMKFFCVNFRVDLGLN 408
TY M GL+K K ++M++ +P T + L++ C + L
Sbjct: 526 ETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKL 585
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
+ I + H ++ LV+ LC + EA
Sbjct: 586 MLERRIRQNIDLSTHTMEELVSFLCQSRKLLEA 618
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 119/268 (44%), Gaps = 17/268 (6%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIF---VGIRKFGS 178
+E MS + R P T S+++ + + + E FD + E+EI VG + +
Sbjct: 402 FEKMSEL-RVQPDSATY---SVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVA 457
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N + + C+ + K+A VF +L+ R + + L+LG G A M
Sbjct: 458 A-YNPMFEYLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLM 516
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN- 297
+ R F P TY + IDG KKG A + E+M + + LP+ +++ A LV
Sbjct: 517 LRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSIL--AALVEKG 574
Query: 298 -IHQARQLFDEMPKRNLKPDIG----AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
H++ L M +R ++ +I ++S L + R L A +++ EKR D
Sbjct: 575 CAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDI 634
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
T+ GL K+ + LY ++E
Sbjct: 635 DMCSTVISGLCKAHKVSEAFALYYELVE 662
>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 653
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/437 (22%), Positives = 180/437 (41%), Gaps = 48/437 (10%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
KA+E F + PT +F L+++ + + D+A E +HV + L + S
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN--VLLQAFCTQKEMKEARSV 200
++++ + K + +E F M +RK + + L+ C + EA S+
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMP------VRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238
Query: 201 FVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ + P+ T N+L+ G + GD T + M L+G P+ VTYN I G C
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHG---------------------------- 291
KG A+ L + M C+P+ T T+I+G
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYV 358
Query: 292 -----AGLVR--NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+GL + +A +LF E + K + Y+A++ L R R + AM+++ EM
Sbjct: 359 YSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMT 418
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
+K + T+ ++ G + +++ M + +L+ C + +V
Sbjct: 419 DKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVM 478
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR--RQVSEASYRM 462
+ +W ++ G P A ++ GLC G EEA + +ML Q +Y +
Sbjct: 479 EAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNI 538
Query: 463 LQRYLVQANANEKLEDL 479
L L + ++ + DL
Sbjct: 539 LFNALCKQSSISRAVDL 555
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 12/319 (3%)
Query: 150 SKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF- 208
S F S E+ L +RM E R F + F V+ +A+ +A +F ++ F
Sbjct: 86 SDFNSLEKVL---NRMRLEN----RVFSEKSFFVMFKAYGKAHLPNKAIELFYRMSFEFY 138
Query: 209 -APNNKTMNILLLGFKESG-DVTAMEMFYHEMVLRGFR--PSVVTYNIRIDGYCKKGCFG 264
P K+ N +L ++G A+E + H + + P+V+++N+ I CK G
Sbjct: 139 CKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCKLGLVD 198
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+A+ LF EM C+P T TL+ G V I +A L DEM P +N +I
Sbjct: 199 NAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATFNVLI 258
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L + D +L+D M K + VTY+T+ GL L+ L DRM+ K V
Sbjct: 259 NGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCV 318
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T ++ R G + + +RG+ + + +LV+GL G+ EEA
Sbjct: 319 PNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRL 378
Query: 445 SKQMLVRRRQVSEASYRML 463
K+ + + +++ Y L
Sbjct: 379 FKESMDKGCKLNTVLYSAL 397
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/378 (22%), Positives = 154/378 (40%), Gaps = 54/378 (14%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKT--LHILARMRYFDQAWELMSHVQ--RTHPSLLTLKS 141
A+E F+ + P PDA+ + L ++ D+A L+ +Q PS T
Sbjct: 200 AIELFR---EMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPATF-- 254
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+++++ + K + + D M F+ +N L+ C + ++ +A S+
Sbjct: 255 -NVLINGLCKKGDFTRVTKLVDNM----FLKGCVPNEVTYNTLIHGLCLKGKLDKALSLL 309
Query: 202 VKLLS-RFAPNNKTMNILLLG------------------------------------FKE 224
+++S + PN T ++ G FKE
Sbjct: 310 DRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVSGLFKE 369
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
AM +F M +G + + V Y+ +DG C+ +AM++ EM C P+ T
Sbjct: 370 GKSEEAMRLFKESMD-KGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAPNAFT 428
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
++L+ G V N H+A +++ +M K N + Y+ +I L + + AM + +M
Sbjct: 429 FSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVWAKML 488
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM--IEGKFVPKTRTVVMLMKFFCVNFR 402
D V Y +M GL + +E KLY+ M +E P T +L C
Sbjct: 489 ATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALCKQSS 548
Query: 403 VDLGLNLWGYLIDRGFCP 420
+ ++L ++DRG P
Sbjct: 549 ISRAVDLLNSMLDRGCDP 566
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 143 SIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
S+++S + K EE + F + M++ K + ++ L+ C ++ EA +
Sbjct: 360 SVLVSGLFKEGKSEEAMRLFKESMDKGC-----KLNTVLYSALVDGLCRDRKPDEAMKIL 414
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++ + APN T + L+ GF E G+ + +M + V Y++ I G CK
Sbjct: 415 SEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKD 474
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP--KRNLKPDIG 318
G +AM ++ +M C P + +++I G ++ +A +L++EM + + +PD+
Sbjct: 475 GKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVI 534
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
YN + ++L + ++ A++L++ M ++ D VT
Sbjct: 535 TYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVT 570
>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
At1g19290-like [Vitis vinifera]
Length = 939
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 107/199 (53%), Gaps = 1/199 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+ + C ++ +AR F L L F P+N T L+ G+ +G+V EM+
Sbjct: 717 YNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P++VTYN I+G CK A RLF ++ + P++ T TLI G + N+
Sbjct: 777 RRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMD 836
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L D+M + + P + Y+A+I+ L + D+ +M+L+++M + + + Y T+
Sbjct: 837 AAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896
Query: 360 FGLMKSSGLEGVCKLYDRM 378
G ++S ++ + KLYD M
Sbjct: 897 QGYIRSGEMQKIHKLYDMM 915
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 115/479 (24%), Positives = 194/479 (40%), Gaps = 64/479 (13%)
Query: 64 LSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA- 122
S +V+ VL L N +L FF+F + +F P ++ K +HIL+R R +D+
Sbjct: 66 FSDDIVDAVLRNL---RLNPTASLGFFQFVSKQQNFRPNVKSYCKLVHILSRGRMYDETR 122
Query: 123 -------------------WELMSHVQR---------------------THPSLLTLKSM 142
W+ + V R T +L +M
Sbjct: 123 AYLNQLVDLCKFKDRGNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNM 182
Query: 143 SIMLSRISKFQSYE----------ETLEAFDRMEREIFVGIRKFGSEEF--NVLLQAFCT 190
RI +S ET A ++ I VGI + F ++++ AFC
Sbjct: 183 G-KCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIV---PDVFMVSIMVNAFCK 238
Query: 191 QKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
++ EA FVK + PN T + L+ G+ GDV A + M +G +VV
Sbjct: 239 DGKVDEAAG-FVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVV 297
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TY + I GYCK+ +A ++ M E A +P + LI G I A +L DE
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M + LK ++ N++I+ + +++ A ++ M + + D+ +Y+T+ G +
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L D+M++ P T L+K C D L +W ++ RG P
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477
Query: 428 LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNL 486
L+ GL +E A K +L R S ++ + L + + E++ +K+L
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDL 536
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 92/172 (53%)
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
PNN NI + G ++G V F+ + L+GF P TY I GY G +A RL
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+EM R +P++ T LI+G N+ +A++LF ++ ++ L P++ YN +I +
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
+++AA +L D+M E+ I VTY + GL K +E KL ++MI+
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKA 883
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 103/220 (46%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL 304
P+ + YNI I G CK G DA R F + +P T TLIHG N+ +A +L
Sbjct: 712 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRL 771
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
DEM +R L P+I YNA+I+ L + +++ A L ++ +K + + VTY+T+ G K
Sbjct: 772 RDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCK 831
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
++ KL D+MIE P T L+ C + ++ + L +I G
Sbjct: 832 IGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIE 891
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
LV G G ++ + M +R + S++ +
Sbjct: 892 YCTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQVD 931
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 124/283 (43%), Gaps = 31/283 (10%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N L+ +C + E+ EA V +++ P++ + N LL G+ G + +M+
Sbjct: 371 NSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQ 430
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G P+V+TYN + G C+ G F DA++++ M + P +TL+ G + N
Sbjct: 431 EGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEG 490
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A L+ ++ R +N MIS L + + A E+ D+M++ D +TY T+
Sbjct: 491 ASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLID 550
Query: 361 GLMKSSGLEGVCK---------------LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
G K+S + K +Y+ +I G F K+R +V + ++
Sbjct: 551 GYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLF--KSRRLVEVTDLL-----TEM 603
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
G+ RG P+ L+ G C G ++AF +M
Sbjct: 604 GI--------RGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEM 638
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 67/287 (23%), Positives = 123/287 (42%), Gaps = 10/287 (3%)
Query: 172 GIRKFGSEE--------FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLG 221
G+ KF SE+ + +L++ +C Q +M EA V + A P+ + +L+ G
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ +G + EM+ G + ++ N I+GYCK+G +A + M P
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ TL+ G + +A L D+M + ++P + YN ++ L R + A+++
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M ++ + D V Y T+ GL K EG L+ ++ F T ++ C
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ ++ + D G P G L+ G C +AF+ M
Sbjct: 522 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAM 568
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 114/500 (22%), Positives = 194/500 (38%), Gaps = 58/500 (11%)
Query: 36 ITRIINDHPFPDQPLHPTLLQ------HLPQTTPLSSTLVENVLGRLFAAHSNGLKAL-- 87
ITR+++ + PD + TLL H + L +++ + ++ LK L
Sbjct: 390 ITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCR 449
Query: 88 -EFFKFTLQHPHF------TPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
F LQ H P + L L +M F+ A L + + S +T
Sbjct: 450 VGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRIT 509
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+M +S + K E E FD+M+ +G G + L+ +C + +A
Sbjct: 510 FNTM---ISGLCKMGKMVEAEEIFDKMKD---LGCSPDGIT-YRTLIDGYCKASNVGQAF 562
Query: 199 SVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
V + +P+ + N L+ G +S + + EM +RG P++VTY IDG+
Sbjct: 563 KVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGW 622
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL------------- 304
CK+G A + EM ++ +T++ G + I +A L
Sbjct: 623 CKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDH 682
Query: 305 -------------------FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
DE K L P+ YN I+ L + ++ A +
Sbjct: 683 ECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSL 742
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
K DN TY T+ G + ++ +L D M+ VP T L+ C + VD
Sbjct: 743 KGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDR 802
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
L+ L +G P+ + L+ G C G + AF+ +M+ S +Y L
Sbjct: 803 AQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALIN 862
Query: 466 YLVQANANEK-LEDLDRMIK 484
L + E+ ++ L++MIK
Sbjct: 863 GLCKHGDIERSMKLLNQMIK 882
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/272 (23%), Positives = 120/272 (44%), Gaps = 1/272 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEMV 239
+ VL+ +C ++ +A + ++L N + N L+ G+ + G++ E MV
Sbjct: 335 YGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMV 394
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P +YN +DGYC++G +A L ++M + P++ T TL+ G V
Sbjct: 395 DWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFD 454
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A Q++ M KR + PD Y+ ++ L + + A L ++ + +T++TM
Sbjct: 455 DALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMI 514
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K + +++D+M + P T L+ +C V + G +
Sbjct: 515 SGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPIS 574
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P + L++GL R E + +M +R
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIR 606
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + + A+ +F KL + PN T N L+ G+ + G++ A +M+
Sbjct: 787 YNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMI 846
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLVR 296
G PSVVTY+ I+G CK G +M+L +M + L TL+ G +G ++
Sbjct: 847 EEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQ 906
Query: 297 NIHQARQLFDEMPKRNL 313
IH +L+D M R L
Sbjct: 907 KIH---KLYDMMHIRCL 920
>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g31850, chloroplastic-like [Cucumis sativus]
Length = 1113
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 150/333 (45%), Gaps = 12/333 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE--EFNVLLQAFCTQ 191
P++ T +L R K +E E F RM+ E G + + VL+ A C
Sbjct: 260 PNVYTFTICIRVLGRAGKI---DEAYEIFRRMDDE------GCGPDLVTYTVLIDALCNA 310
Query: 192 KEMKEARSVFVKLLSRFAPNNKTMNILLLG-FKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+++ A+ +FVK+ + ++ + I LL F + GD+ + F+ +M G+ P VVT+
Sbjct: 311 GQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTF 370
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
I +D CK F +A F+ M + LP+L T TLI G I A +L D M
Sbjct: 371 TILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMES 430
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
++P Y I + + A+E ++M+ K I + V + + L + L
Sbjct: 431 VGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLRE 490
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+++ + E P + T M+MK + +VD +NL +I G P ++ L+
Sbjct: 491 AKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLID 550
Query: 431 GLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
L GR +EA++ +M + + +Y L
Sbjct: 551 SLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/327 (25%), Positives = 146/327 (44%), Gaps = 5/327 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
TL S + ++ + + E+ + F M+ VG + FN+LL ++ E
Sbjct: 787 TLASYNCLIGELLEVHYTEKAWDLFKDMKN---VGCAP-DAFTFNMLLAVHGKSGKITEL 842
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
++ +++SR P+ T NI++ +S ++ F++++V FRP+ TY IDG
Sbjct: 843 FELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDG 902
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
K G +AMRLFEEM C P+ LI+G G + + A QLF M ++PD
Sbjct: 903 LAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ +Y ++ L ++ A+ +E++ + D + Y+ + GL KS +E LY+
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M VP T LM + V+ ++ L G P + L+ G
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
E A+ K M+V + +Y L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/411 (22%), Positives = 166/411 (40%), Gaps = 72/411 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P F + +L R D+A+E+ + + P L+T ++++ + E
Sbjct: 260 PNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTY---TVLIDALCNAGQLENA 316
Query: 159 LEAFDRM-------EREIFVGI-------------RKFGSE-----------EFNVLLQA 187
E F +M ++ I++ + ++F S+ F +L+
Sbjct: 317 KELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDV 376
Query: 188 FCTQKEMKEARSVF-VKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
C ++ EA + F V PN T N L+ G +G + M G +P+
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMER-------VACLPSLQTIT---------TLIH 290
TY ID + K G G A+ FE+M+ VAC SL ++ T+ +
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496
Query: 291 G---AGL----------------VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
G GL V + +A L EM + +PD+ N++I SL +
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
++ A ++ D M++ ++ VTY+T+ GL K ++ +L++ MI K P T +
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFN 616
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
L+ FC N V+L L ++ + P + ++ GL + AF
Sbjct: 617 TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 142/327 (43%), Gaps = 16/327 (4%)
Query: 72 VLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-- 129
++G L H KA + FK +++ P F L + + + +EL +
Sbjct: 794 LIGELLEVHYTE-KAWDLFK-DMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMIS 851
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF-DRMEREIFVGIRKFGSEEFNVLLQAF 188
+R P +T +I++S ++K + ++ L+ F D + + R +G L+
Sbjct: 852 RRCKPDAITY---NIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGP-----LIDGL 903
Query: 189 CTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
++EA +F ++ S + PN NIL+ G+ + GD + MV G RP
Sbjct: 904 AKVGRLEEAMRLFEEM-SDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPD 962
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ +Y I +D C G +A+ F E++ P +I+G G + + +A L++
Sbjct: 963 LKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYN 1022
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
EM R + PD+ YN+++ +L + A + +E++ + D TY+ + G S
Sbjct: 1023 EMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSE 1082
Query: 367 GLEGVCKLYDRMIEGKFVPKTRTVVML 393
E +Y M+ P T L
Sbjct: 1083 NPEHAYTVYKNMMVDGCNPNIGTYAQL 1109
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/352 (23%), Positives = 148/352 (42%), Gaps = 7/352 (1%)
Query: 134 PSLL-TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
P++L T ++ + ML + E+ F+ M+++I IR+ + + + +A +
Sbjct: 116 PTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKI---IRR-DLDTYLTIFKALSIRG 171
Query: 193 EMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+++ +V K+ + F N + N L+ +SG Y MV G +PS+ TY+
Sbjct: 172 GLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYS 231
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ KK M L +EME + P++ T T I G I +A ++F M
Sbjct: 232 ALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDE 291
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
PD+ Y +I +L L A EL +M+ D V Y T+ L+
Sbjct: 292 GCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTF 351
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+ + +M ++P T +L+ C D + + +G P+ H + L+ G
Sbjct: 352 KEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICG 411
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDLDRM 482
L GR E+A + M Q + +Y Y ++ K +E ++M
Sbjct: 412 LLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 99/475 (20%), Positives = 189/475 (39%), Gaps = 77/475 (16%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L + F ++ + P F + +L + R FD+A+ V R L L + +
Sbjct: 348 LDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFD-VMRKQGILPNLHTYN 406
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRK-----------FGS--------EEF--- 181
++ + + E+ L+ D ME VG++ FG E F
Sbjct: 407 TLICGLLRAGRIEDALKLLDTMES---VGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463
Query: 182 ------------NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDV 228
N L + ++EA+++F L AP++ T N+++ + + G V
Sbjct: 464 KAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQV 523
Query: 229 TAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
EM+ G P V+ N ID K G +A ++F+ M+ + P++ T TL
Sbjct: 524 DEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTL 583
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
+ G G + +A +LF+ M + P+ ++N ++ + ++ A+++ +M
Sbjct: 584 LSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDC 643
Query: 349 GHDNVTYHTMFFGLMKSSGLE------------------GVCKLYDRMIE----GKFVPK 386
D +TY+T+ +GL+K + + +C L +++ G +
Sbjct: 644 KPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKSMHPDHVTICTLLPGLVKCGQIGDAISI 703
Query: 387 TRTVVMLMKF-------------FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
R + ++F V +D + L+ G C L LV LC
Sbjct: 704 ARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLC 763
Query: 434 SRGRWEEAFECSKQMLVRRRQVSE--ASYRMLQRYLVQANANEKLEDLDRMIKNL 486
R A++ + ++ +S ASY L L++ + EK DL + +KN+
Sbjct: 764 KHKRELYAYQIFDK-FTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNV 817
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/447 (20%), Positives = 172/447 (38%), Gaps = 57/447 (12%)
Query: 77 FAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HP 134
F KA+E F+ ++ P A +L+ LA M +A + + ++ P
Sbjct: 447 FGKSGETGKAVETFE-KMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAP 505
Query: 135 SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE----FNVLLQAFCT 190
+T ++M+ SK +E + M R G E N L+ +
Sbjct: 506 DSVTY---NMMMKCYSKVGQVDEAVNLLSEMIRN--------GCEPDVIVVNSLIDSLYK 554
Query: 191 QKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
+ EA +F ++ + +P T N LL G + G V + M+ + P+ ++
Sbjct: 555 AGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTIS 614
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
+N +D +CK A+++F +M + C P + T T+I+G ++ A F ++
Sbjct: 615 FNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL- 673
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELM-DEMEEKRIGHDNVTYHTMFFGLMKSSG- 367
K+++ PD ++ L++C + A+ + D M + R + + + G + +
Sbjct: 674 KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEM 733
Query: 368 -----------LEGVCK------------------LYDRMIEGKFVPKTRTVVMLMKFFC 398
L G+C+ LY I KF K L + C
Sbjct: 734 DKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNC 793
Query: 399 VN---FRVDLGLNLWGYLIDR---GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+ V W D G P ++L+ G+ E FE K+M+ RR
Sbjct: 794 LIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRR 853
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDL 479
+ +Y ++ L ++N +K D
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDF 880
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 111/267 (41%), Gaps = 5/267 (1%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF--RPSVVTYNIRIDGYCKKGCFG 264
RF N L+ G ++ +F E+VL G S + +R+ CK
Sbjct: 712 RFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRV--LCKHKREL 769
Query: 265 DAMRLFEEM-ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
A ++F++ +++ P+L + LI V +A LF +M PD +N +
Sbjct: 770 YAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNML 829
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
++ + + EL EM +R D +TY+ + L KS+ L+ + ++ F
Sbjct: 830 LAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDF 889
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P RT L+ R++ + L+ + D G P+ ++L+ G G E A +
Sbjct: 890 RPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQ 949
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQA 470
K+M+ + SY +L L A
Sbjct: 950 LFKRMVNEGIRPDLKSYTILVDCLCLA 976
>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 794
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/380 (23%), Positives = 158/380 (41%), Gaps = 32/380 (8%)
Query: 94 LQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQ 153
++ PT +AF + + A D+A E + H + + S + +L+ + K
Sbjct: 92 MKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNVLVKHG 151
Query: 154 SYEETLEAFDRM-ERE----------IFVGIRKFGSEE--------------------FN 182
E + +D M +R + G+ K G E +N
Sbjct: 152 KVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYN 211
Query: 183 VLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
L+ +C + + + A +F +L + F P KT ++ GF + G ++ EM R
Sbjct: 212 TLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSER 271
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
G S+ YN ID K GC +A M + C P + T LI G+ +H+A
Sbjct: 272 GLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKA 331
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
QL ++ KR L P+ +Y +I + + + A++L+ +M E+ D VTY + G
Sbjct: 332 EQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPH 421
L+ + ++ + ++M+E +P +LM C R+ L ++D+ P
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451
Query: 422 GHALDLLVTGLCSRGRWEEA 441
LV G G +EEA
Sbjct: 452 AFITATLVDGFIRHGDFEEA 471
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/345 (24%), Positives = 135/345 (39%), Gaps = 53/345 (15%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NVL+ C + + A+ + ++L + AP+ L+ GF GD + + +
Sbjct: 420 YNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTI 479
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P VV YN I GYCK G DA+ F+ M + P T +T+I G + ++H
Sbjct: 480 EKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLH 539
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A ++F M K KP++ Y +I+ D+N A + +M R+ + VTY +
Sbjct: 540 GALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILI 599
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK------------------------ 395
K L C +++M+ K +P T LM
Sbjct: 600 GCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVL 659
Query: 396 -----------------------FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
C + V L+L ++ +GF P +L L+ GL
Sbjct: 660 ESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGL 719
Query: 433 CSRGR---WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
C GR W C ++ R QV+ L +L Q +E
Sbjct: 720 CLEGRSQDWNNVISC--KLNERELQVAVKYSEKLDAFLSQGQTSE 762
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/290 (23%), Positives = 124/290 (42%), Gaps = 1/290 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ +C Q E A + +K+ R P+ T L+ G +G+V ++MV
Sbjct: 350 YTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMV 409
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P YN+ + G CKKG A L EM P TL+ G +
Sbjct: 410 EKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFE 469
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A++LF+ ++ + P + YNAMI + + A+ M + D TY T+
Sbjct: 470 EAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTII 529
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G +K + L G +++ M++G P T +L+ FC++ ++ + ++
Sbjct: 530 DGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLK 589
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P+ +L+ C +A +QML+ + ++ +Y L L
Sbjct: 590 PNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTN 639
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/286 (24%), Positives = 125/286 (43%), Gaps = 5/286 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
+N+L+ C+ E+ +A + + + R PN + L+ + + G+ + A+++ +M
Sbjct: 315 YNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLI-KM 373
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG +P +VTY I G G A+ + +M LP L+ G +
Sbjct: 374 SERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRL 433
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A+ L EM +N+ PD ++ IR D A +L + EK I V Y+ M
Sbjct: 434 PAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAM 493
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K ++ + RMI+G P T ++ + + L ++G ++ +G
Sbjct: 494 IKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMV-KGA 552
Query: 419 C-PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
C P+ LL+ G C G A + KQML R + + +Y +L
Sbjct: 553 CKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTIL 598
>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
Length = 376
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 119/262 (45%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N +L F +K+ ++ + + + N + NI++ G ++G+V + M
Sbjct: 28 YNAMLIGFLRVGRIKDCFDLWELMGRKGSQNVVSFNIMMRGLFDNGEVDKAISIWELMKK 87
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
GF +TY I IDG+CK G ++ + E E + + +I+G + +
Sbjct: 88 SGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAKLDK 147
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A + + M K KP+ YN +I+ + + A+ + EM VTYHT+
Sbjct: 148 AVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHTLIN 207
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
GL K L M+E + P T +LMK C +V++ L LW ++ +GF P
Sbjct: 208 GLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKGFKP 267
Query: 421 HGHALDLLVTGLCSRGRWEEAF 442
++L+ GLCS G+ + A
Sbjct: 268 DVQMHNILIHGLCSVGKTQHAL 289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/348 (21%), Positives = 145/348 (41%), Gaps = 27/348 (7%)
Query: 102 TPDAFEKTLHILARMRY------FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
+PDA ++ +R FD WELM + + S +IM+ +
Sbjct: 22 SPDAVVYNAMLIGFLRVGRIKDCFD-LWELMGRKGSQN-----VVSFNIMMRGLFDNGEV 75
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF------VKLLSRFA 209
++ + ++ M++ FV S + +++ FC + ++ V +L FA
Sbjct: 76 DKAISIWELMKKSGFVE----DSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFA 131
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRL 269
+ ++ G + + + M+ G +P+ YN I+G+ F DA+R+
Sbjct: 132 -----YSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRV 186
Query: 270 FEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
F EM + C P++ T TLI+G +A L EM ++ KP + Y+ ++ L +
Sbjct: 187 FREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQ 246
Query: 330 CRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ A++L +++ K D ++ + GL + LY M P T
Sbjct: 247 GHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVT 306
Query: 390 VVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR 437
LM+ F + + L +W ++ G P + ++ + GLCS R
Sbjct: 307 HNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNR 354
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/286 (21%), Positives = 118/286 (41%), Gaps = 9/286 (3%)
Query: 123 WELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
WELM S+ + I++ K ++L + E + V + ++
Sbjct: 82 WELMKKSGFVEDSI----TYGIIIDGFCKNGYINKSLHVLEIAEGKGGV----LDAFAYS 133
Query: 183 VLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
++ C + ++ +A SV ++ S PN N L+ GF + + EM
Sbjct: 134 AMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSM 193
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P++VTY+ I+G CK F +A L +EM P + T + L+ G + A
Sbjct: 194 DCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMA 253
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG 361
QL++++ + KPD+ +N +I L A+ L +M + VT++T+ G
Sbjct: 254 LQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEG 313
Query: 362 LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL 407
K + ++ R++ P + + +K C R+ +
Sbjct: 314 FYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAI 359
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 104/253 (41%), Gaps = 5/253 (1%)
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
ESGD+ + Y EM P V YN + G+ + G D L+E M R S
Sbjct: 2 ESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG---SQN 58
Query: 284 TITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
++ I GL N + +A +++ M K D Y +I + +N ++ +++
Sbjct: 59 VVSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLE 118
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
E K D Y M GL K + L+ + + MI+ P L+ F
Sbjct: 119 IAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGAS 178
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
+ D + ++ + P L+ GLC R+ EA++ K+ML + + +Y
Sbjct: 179 KFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYS 238
Query: 462 MLQRYLVQANANE 474
+L + L Q + E
Sbjct: 239 LLMKGLCQGHKVE 251
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 83/169 (49%), Gaps = 1/169 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ C + EA + ++L + + P T ++L+ G + V +++++
Sbjct: 202 YHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVL 261
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+GF+P V +NI I G C G A+ L+ +M C P+L T TL+ G +I
Sbjct: 262 SKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIR 321
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
A ++ + + L+PDI +YN + L C ++ A+ + + K+I
Sbjct: 322 NALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKI 370
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 6/199 (3%)
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-TY 355
+I A++++ EM + + PD YNAM+ +R + +L + M K G NV ++
Sbjct: 5 DIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRK--GSQNVVSF 62
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ M GL + ++ +++ M + FV + T +++ FC N ++ L++
Sbjct: 63 NIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEG 122
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G A ++ GLC + ++A M+ + + Y L V A+ K
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGAS---K 179
Query: 476 LEDLDRMIKNLQAVLPPPT 494
+D R+ + + ++ PT
Sbjct: 180 FDDAIRVFREMGSMDCSPT 198
>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 557
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 103/449 (22%), Positives = 181/449 (40%), Gaps = 40/449 (8%)
Query: 41 NDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFT 100
+ HP+P LP T PL+ RL AH+ G+ A P+
Sbjct: 23 SSHPYPS----------LPTTKPLTPN------SRLNFAHA-GVAA---------SPNAV 56
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P L L R ++A L+ + PS ++ I K + T E
Sbjct: 57 PHRAVSNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAAL----IKKLCASGRTAE 112
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLL 220
A R + +N ++ +C ++ AR + + P++ T N L+
Sbjct: 113 A-----RRVLAACEP-DVMAYNAMVAGYCVTGQLDAARRLVADM--PMEPDSYTYNTLIR 164
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G G + +M+ RG P VVTY I ++ CK+ + AM+L +EM C P
Sbjct: 165 GLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAP 224
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
+ T +++G + A + +P +P+ +YN ++ L A +LM
Sbjct: 225 DIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLM 284
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
EM +K + VT++ + L + +E ++ D++ + P + + ++ FC
Sbjct: 285 AEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQ 344
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
++D + ++ RG P + + L+T LC G + A E Q+ + SY
Sbjct: 345 KKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISY 404
Query: 461 RMLQRYLVQAN-ANEKLEDLDRMI-KNLQ 487
+ L +A E LE L+ M+ K LQ
Sbjct: 405 NTVIDGLTKAGKTKEALELLNEMVTKGLQ 433
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 150/328 (45%), Gaps = 13/328 (3%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKE 196
+ +I+L K Y++ ++ D M R G +NV++ C + + +
Sbjct: 193 TYTILLEATCKRSGYKQAMKLLDEM--------RAKGCAPDIITYNVVVNGICQEGRVDD 244
Query: 197 ARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
A L S PN + NI+L G + E EM +G+ P+VVT+N+ I
Sbjct: 245 AIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLIS 304
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
C++G AM + +++ + C P+ + ++H + + +A + M R P
Sbjct: 305 FLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYP 364
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
DI +YN ++++L R +++AA+EL+ ++++K ++Y+T+ GL K+ + +L
Sbjct: 365 DIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELL 424
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
+ M+ P T + C R++ + + + D G P+ + ++ GLC R
Sbjct: 425 NEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKR 484
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRML 463
A + M+ +E++Y +L
Sbjct: 485 RETHNAIDLFIYMISNGCMPNESTYTIL 512
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/312 (23%), Positives = 140/312 (44%), Gaps = 6/312 (1%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFY 235
S +N L++ C + A V +L R P+ T ILL K SG AM++
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLL- 214
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
EM +G P ++TYN+ ++G C++G DA+ + + C P+ + ++ G
Sbjct: 215 DEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTA 274
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
A +L EM ++ P++ +N +IS L R + AME++D++ + ++++Y
Sbjct: 275 ERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSY 334
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ + K ++ + M+ P + L+ C VD + L L D
Sbjct: 335 NPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKD 394
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+G P + + ++ GL G+ +EA E +M+ + Q +Y + L + ++
Sbjct: 395 KGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCR---EDR 451
Query: 476 LEDLDRMIKNLQ 487
+E+ R +Q
Sbjct: 452 IEEAIRAFCKVQ 463
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/342 (24%), Positives = 140/342 (40%), Gaps = 50/342 (14%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+EF K H P ++ L L ++ A +LM+ + Q+ +P + + ++
Sbjct: 245 AIEFLKSLPSH-GCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPP--NVVTFNM 301
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSV 200
++S + + E +E D+ I K+G S +N +L AFC QK+M A +
Sbjct: 302 LISFLCRRGLVEPAMEVLDQ--------IPKYGCTPNSLSYNPILHAFCKQKKMDRAMA- 352
Query: 201 FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
FV+L MV RG P +V+YN + C+
Sbjct: 353 FVEL---------------------------------MVSRGCYPDIVSYNTLLTALCRG 379
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
G A+ L +++ C P L + T+I G +A +L +EM + L+PDI Y
Sbjct: 380 GEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITY 439
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+ + S L R + A+ ++++ I + V Y+ + GL K L+ MI
Sbjct: 440 STISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMIS 499
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+P T +L++ V L G L RG G
Sbjct: 500 NGCMPNESTYTILIEGLTYEGLVKEARELLGELCSRGVVSKG 541
>gi|255660868|gb|ACU25603.1| pentatricopeptide repeat-containing protein [Verbena macdougalii]
Length = 484
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 186/446 (41%), Gaps = 52/446 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FF++ + F + K + IL R + A ++ + + L + M +M
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK--GLEWDEDMWVM 85
Query: 146 -LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ K +E+++ F +ME +G+ + + +N L + + A+ F K+
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEE---LGVER-TIKSYNALFKVILRRGRYMMAKRYFNKM 141
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
LS P T N+++ GF SG V F+ +M R P VVTYN I+GY +
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKM 201
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + F EM+ P++ T TTLI G V + A +L +EM +KP+ Y+ +
Sbjct: 202 EEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTL 261
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L ++ A ++ EM +K + DN + + KS L+ + MI
Sbjct: 262 LPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLS 321
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG----------------------FCP 420
+ +L++ FC + D + L LI++ C
Sbjct: 322 VPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCN 381
Query: 421 HGH--------------------ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+G AL+ L+ G G + AFE K ML R+ +++Y
Sbjct: 382 NGQASKAETLVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 461 RML-QRYLVQANANEKLEDLDRMIKN 485
+L Q YL + + LD MI+N
Sbjct: 442 NLLVQSYLKKNEPXDAKAALDSMIEN 467
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 127/288 (44%), Gaps = 9/288 (3%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K+ N L G + ++++M+ G P+ T+N+ I G+ G A R FE+
Sbjct: 116 KSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFED 175
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ P + T T+I+G V+ + +A + F EM RN++P + Y +I +
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQ 235
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A+ L++EM+ I + +TY T+ GL + + + M++ P ++ M
Sbjct: 236 VDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFM 295
Query: 393 -LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSK 446
L+ C + +D ++ +I LL+ C G++++A + K
Sbjct: 296 RLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGLLIENFCKAGQYDKAVKLLDKLIEK 355
Query: 447 QMLVRRR---QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+++R + + ++Y + YL K E L R + L P
Sbjct: 356 DIILRPQSTLHLEPSAYNPMIEYLCNNGQASKAETLVRQLMKLGVQDP 403
>gi|296087160|emb|CBI33534.3| unnamed protein product [Vitis vinifera]
Length = 506
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 199/470 (42%), Gaps = 32/470 (6%)
Query: 26 TTTQSSEIERITRIINDHPFP--DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
T S ++ + II + P ++ LH T ++ P E+V L ++
Sbjct: 56 TPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSP----------EDVEDSLKLSYGFP 105
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
A++FF+++ + +P ++ + +L + FD W+ + +++ LL+L + +
Sbjct: 106 GSAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQ--GLLSLATFA 163
Query: 144 IMLSRISKFQSYEETLEAFDRME-----REIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ S E + FD ME R+I N LL A C +A
Sbjct: 164 SIFSSYVIADRVREAIMTFDVMEQYGCPRDIVA---------LNSLLSAICRDGRTVQAA 214
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGY 257
+ P+ T ILL G++ G+ A + EMV+ G+ P V+
Sbjct: 215 EFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNA 274
Query: 258 CKKGCFG--DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL-K 314
G G +AM+ FE M C P ++ + + A+ L+ M RN+ +
Sbjct: 275 LLHGPDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICR 334
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD YN+MI+ C ++ A ++DEM D+ TY+ +F L++ LE +
Sbjct: 335 PDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSI 394
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M++ + VP ++ + V + +W Y+I+ +LLVTGL
Sbjct: 395 FSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRD 454
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
R EA + +K M+VR +++ ++ L+ LV+ ++L R K
Sbjct: 455 HDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWK 504
>gi|224113637|ref|XP_002316529.1| predicted protein [Populus trichocarpa]
gi|222859594|gb|EEE97141.1| predicted protein [Populus trichocarpa]
Length = 678
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 132/277 (47%), Gaps = 12/277 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGD-------VTAME 232
FNV++ A C +++EA SVF ++L S PN T N+++ G + GD V ME
Sbjct: 241 FNVVVHALCKDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKME 300
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
+ M +P+ VTYN IDG+CK G A L EM ++ P+++T T+I G
Sbjct: 301 I----MSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGY 356
Query: 293 GLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN 352
+ +A +L DEM +R L P+ YN+++ L D++ A + +M +K+I D
Sbjct: 357 SRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDK 416
Query: 353 VTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
T + GL ++ + K ++++E + + +L+ F C + L
Sbjct: 417 FTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLAR 476
Query: 413 LIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ RG P L+ G C G E A + +M+
Sbjct: 477 MYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMV 513
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 95/393 (24%), Positives = 174/393 (44%), Gaps = 45/393 (11%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEM--- 194
+ + ++++ + K +E L F R+ + GI FN+++ C +M
Sbjct: 237 NVNTFNVVVHALCKDCKLQEALSVFYRILKS---GIWP-NVVTFNMMVDGACKMGDMDLA 292
Query: 195 -KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
K R + + PN+ T N L+ GF + G +T E +EM+ P+V TY
Sbjct: 293 LKLVRKMEIMSAGSIKPNSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATM 352
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH---------GA------------ 292
I+GY + GC +A+RL +EM LP+ +++H GA
Sbjct: 353 IEGYSRAGCLEEALRLCDEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQI 412
Query: 293 ------------GLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
GL RN I A + +++ + NL D ++N +I+ L + + AA +
Sbjct: 413 PLDKFTCSILTRGLCRNGYITTALKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQ 472
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L+ M + + D VT+ T+ G K +E ++YD+M++G+ P ++ C
Sbjct: 473 LLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLC 532
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+ VD+ +L L G + L+ G + G++++AF+ S M S A
Sbjct: 533 KDGLVDVARSLVDVLQRMGL-VDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSA 591
Query: 459 SYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+Y + ++L + ++ ++L M+ L VLP
Sbjct: 592 TYNTVIKFLCKFGCVQEAKELMTMMV-LWGVLP 623
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/396 (22%), Positives = 163/396 (41%), Gaps = 39/396 (9%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
LEF+ + + + + +H+L R +D A LM + L+T+ +S +
Sbjct: 99 VLEFYNWVGEKKSVLHSLEISCSVIHVLVNSRRYDDALSLMGN-------LMTVNGLSPL 151
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
E LEA + GI + F+ L++A CTQ +K L
Sbjct: 152 -----------EVLEALNNS-----YGICESNHAVFDALVRA-CTQIGATVGACEVIKKL 194
Query: 206 -------SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ A NN L + ++ + Y EMV G+ +V T+N+ + C
Sbjct: 195 QIEGCWVTIHAWNN-----FLSHLIKVNEIHRFWIVYKEMVSYGYMENVNTFNVVVHALC 249
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQL---FDEMPKRNLKP 315
K +A+ +F + + P++ T ++ GA + ++ A +L + M ++KP
Sbjct: 250 KDCKLQEALSVFYRILKSGIWPNVVTFNMMVDGACKMGDMDLALKLVRKMEIMSAGSIKP 309
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
+ YN++I + + A EL +EM + I + TY TM G ++ LE +L
Sbjct: 310 NSVTYNSLIDGFCKIGGITVAEELRNEMMKIDIEPNVRTYATMIEGYSRAGCLEEALRLC 369
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
D M+E +P + +M + + VD ++ + D+ +L GLC
Sbjct: 370 DEMVERGLLPNSVVYNSIMHWLYMEGDVDGASLVFTDMSDKQIPLDKFTCSILTRGLCRN 429
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
G A + Q+L S+ +L +L ++N
Sbjct: 430 GYITTALKFLNQVLENNLIEDAFSHNILINFLCKSN 465
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 95/209 (45%), Gaps = 2/209 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+L+ C AR + ++ R P+ T L+ G + G++ + Y +MV
Sbjct: 455 NILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVK 514
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
+P+++ YN I+G CK G A L + ++R+ + ++ T TLI+G +
Sbjct: 515 GEEKPNLLVYNSIINGLCKDGLVDVARSLVDVLQRMGLVDTI-TYNTLINGYFNCGKFDK 573
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A +L M + YN +I L + + A ELM M + DN+TY T+
Sbjct: 574 AFKLSTLMQNAGILASSATYNTVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVI 633
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
+ K+ E V +L+D M+ VP T
Sbjct: 634 NINKNCSAEEVIELHDYMVLKGVVPDKLT 662
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 108/244 (44%), Gaps = 10/244 (4%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-----TMNILLLGFKESGDVTAMEMFYH 236
++L + C + A +K L++ NN + NIL+ +S + A
Sbjct: 420 SILTRGLCRNGYITTA----LKFLNQVLENNLIEDAFSHNILINFLCKSNNFAAARQLLA 475
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
M +RG P VVT+ IDG+CK+G A++++++M + P+L ++I+G
Sbjct: 476 RMYVRGLVPDVVTFGTLIDGHCKEGNIESAVQVYDKMVKGEEKPNLLVYNSIINGLCKDG 535
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ AR L D + + L I YN +I+ C + A +L M+ I + TY+
Sbjct: 536 LVDVARSLVDVLQRMGLVDTI-TYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYN 594
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ L K ++ +L M+ +P T L+ N + + L Y++ +
Sbjct: 595 TVIKFLCKFGCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLK 654
Query: 417 GFCP 420
G P
Sbjct: 655 GVVP 658
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/249 (24%), Positives = 101/249 (40%), Gaps = 16/249 (6%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMS--HVQRTHPSLLTLKS 141
AL+F L++ DAF + I L + F A +L++ +V+ P ++T +
Sbjct: 435 ALKFLNQVLEN---NLIEDAFSHNILINFLCKSNNFAAARQLLARMYVRGLVPDVVTFGT 491
Query: 142 MSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
+ + K + E ++ +D+M + G K +N ++ C + ARS
Sbjct: 492 L---IDGHCKEGNIESAVQVYDKMVK----GEEKPNLLVYNSIINGLCKDGLVDVARS-L 543
Query: 202 VKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
V +L R + T N L+ G+ G M G S TYN I CK
Sbjct: 544 VDVLQRMGLVDTITYNTLINGYFNCGKFDKAFKLSTLMQNAGILASSATYNTVIKFLCKF 603
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAY 320
GC +A L M LP T TL+ + + +L D M + + PD Y
Sbjct: 604 GCVQEAKELMTMMVLWGVLPDNITYRTLVININKNCSAEEVIELHDYMVLKGVVPDKLTY 663
Query: 321 NAMISSLIR 329
++S L++
Sbjct: 664 ENIVSPLLQ 672
>gi|222641466|gb|EEE69598.1| hypothetical protein OsJ_29150 [Oryza sativa Japonica Group]
Length = 579
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/402 (24%), Positives = 170/402 (42%), Gaps = 10/402 (2%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
L +L FF F + P F+ PD+ + LA R F L+S + PS L+
Sbjct: 103 LPSLRFFLFAGELPGFSHHPDSLLVLANSLAGARLFPLLRSLLSDLP---PSALSRGLFP 159
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
++ S+ + E+ + AF M F +F+ LL A ++ F +
Sbjct: 160 LLFRAYSRARLPEDAIRAFSSMAGFGFPPT----IADFHSLLFALSRNGLVEYGERFFRE 215
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
++F + K IL+ G+ + EMV RG V YN ID C+ G
Sbjct: 216 STAQFDVSAKAYTILISGWAVVKKPENARSLFDEMVKRGVELDVHVYNALIDALCRGGDI 275
Query: 264 GDAMRLFEEMERV-ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
A M++ +P+ T +H A +++ A ++ D M L P++ YNA
Sbjct: 276 TSAQEQLSNMQKSHGLVPNAATYGPFLHAACASKDVRAALRVLDRMHTHALTPNVFTYNA 335
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I L ++N A ++DE+ + D +Y+T+ K + +L RM +
Sbjct: 336 VIRLLCDLGEINEAYNILDEITTQGEKPDVWSYNTLLNAHCKLKEVNKALRLISRMDKEL 395
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS-RGRWEEA 441
P + ML+K R D + +W + RGF P +++ GL S +GR E+A
Sbjct: 396 CPPDRHSYNMLLKMLISVGRFDTAIEVWDGMEKRGFHPGAATYAVMIHGLASKKGRAEDA 455
Query: 442 FECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL-DRM 482
+M+ +A+ +L+ L+ ++L L DRM
Sbjct: 456 CSYFVRMVDEGIPPYQATCEVLRDRLLMLGLRDQLGVLTDRM 497
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/366 (24%), Positives = 144/366 (39%), Gaps = 19/366 (5%)
Query: 49 PLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL---KALEFFKFTLQHPHFTPTPDA 105
PL +LL LP S L + LF A+S A+ F ++ F PT
Sbjct: 139 PLLRSLLSDLP-----PSALSRGLFPLLFRAYSRARLPEDAIRAFS-SMAGFGFPPTIAD 192
Query: 106 FEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM 165
F L L+R + + T ++ K+ +I++S + + E FD M
Sbjct: 193 FHSLLFALSRNGLVEYGERFFR--ESTAQFDVSAKAYTILISGWAVVKKPENARSLFDEM 250
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFK 223
+ G+ + +N L+ A C ++ A+ + PN T L
Sbjct: 251 VKR---GV-ELDVHVYNALIDALCRGGDITSAQEQLSNMQKSHGLVPNAATYGPFLHAAC 306
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
S DV A M P+V TYN I C G +A + +E+ P +
Sbjct: 307 ASKDVRAALRVLDRMHTHALTPNVFTYNAVIRLLCDLGEINEAYNILDEITTQGEKPDVW 366
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+ TL++ ++ +++A +L M K PD +YN ++ LI + A+E+ D M
Sbjct: 367 SYNTLLNAHCKLKEVNKALRLISRMDKELCPPDRHSYNMLLKMLISVGRFDTAIEVWDGM 426
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSG-LEGVCKLYDRMIEGKFVPKTRTV-VMLMKFFCVNF 401
E++ TY M GL G E C + RM++ P T V+ + +
Sbjct: 427 EKRGFHPGAATYAVMIHGLASKKGRAEDACSYFVRMVDEGIPPYQATCEVLRDRLLMLGL 486
Query: 402 RVDLGL 407
R LG+
Sbjct: 487 RDQLGV 492
>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g09900-like [Brachypodium distachyon]
Length = 665
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 122/289 (42%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ +C + AR + + P+ T L+ G + G V +M+
Sbjct: 108 YNTLVAGYCRYGRLDAARRLIASM--PVPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLR 165
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
R +PSVVTY + ++ CK FG AM++ +EM C P++ T +I+G +
Sbjct: 166 RECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDD 225
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
ARQ+ + + +PD +Y ++ L + L EM E + VT+ +
Sbjct: 226 ARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVR 285
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +E ++ DRM E T +++ C RVD + G P
Sbjct: 286 FFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSP 345
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ GLC GRWE+A E +M+ + +E ++ L Q
Sbjct: 346 DTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQ 394
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 136/311 (43%), Gaps = 7/311 (2%)
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L++ C + +A V AP + N L+ G+ G + A M +
Sbjct: 76 LIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP- 134
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P TY I G C +G GDA+ L ++M R C PS+ T T L+ QA
Sbjct: 135 --PDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
++ DEM + P+I YN +I+ + R ++ A ++++ + D V+Y T+ GL
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+ E V L+ M+E VP T ML++FFC V+ + + + + G +
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRM 482
++++ +C +GR ++AFE M SY + + L +A + ED +
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAG---RWEDAKEL 369
Query: 483 IKNLQAVLPPP 493
+ + PP
Sbjct: 370 LNEMVRKNCPP 380
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/393 (22%), Positives = 158/393 (40%), Gaps = 62/393 (15%)
Query: 103 PDAFEKTLHI---LARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEE 157
PDA+ T I R R D A L+ + R PS++T +++L + K + +
Sbjct: 135 PDAYTYTPLIRGLCDRGRVGD-ALSLLDDMLRRECQPSVVT---YTVLLEAVCKSSGFGQ 190
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
++ D M R G +NV++ C + + +AR + +L S F P+
Sbjct: 191 AMKVLDEM--------RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDT 242
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY---------------------- 250
+ +L G + +E+ + EMV P+ VT+
Sbjct: 243 VSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDR 302
Query: 251 -------------NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
NI I+ CK+G DA M C P + TT++ G
Sbjct: 303 MSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGR 362
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
A++L +EM ++N P+ +N I L + ++ A+ L+++M E VTY+
Sbjct: 363 WEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNA 422
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G ++ +L++ + P T T L+ C R+D L ++
Sbjct: 423 LVNGFCVQGRVDSALELFNSL---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQND 479
Query: 418 FCP-HGHALDLLVTGLCSRGRWEEAFECSKQML 449
CP + ++LV+ C +G EEA E +QM+
Sbjct: 480 -CPLNVVTFNVLVSFFCQKGFVEEAIELVQQMM 511
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/243 (26%), Positives = 100/243 (41%), Gaps = 4/243 (1%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P V I C++G DA R+ E + TL+ G +
Sbjct: 64 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDA 123
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+L MP + PD Y +I L + A+ L+D+M + VTY +
Sbjct: 124 ARRLIASMP---VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ KSSG K+ D M P T +++ C RVD + L GF P
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQP 240
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LEDL 479
+ ++ GLC+ RWE+ +M+ +E ++ ML R+ + E+ +E L
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVL 300
Query: 480 DRM 482
DRM
Sbjct: 301 DRM 303
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/371 (18%), Positives = 154/371 (41%), Gaps = 17/371 (4%)
Query: 98 HFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+ P F+ + R ++A E++ + H +I+++ I K ++
Sbjct: 272 NCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSE-HGCTANTTLCNIVINSICKQGRVDD 330
Query: 158 TLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK 213
E + M +G + +L+ C ++A+ + +++ + P N+
Sbjct: 331 AFEFLNNMG--------SYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNE 382
Query: 214 -TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T N + + G + + +M G +VTYN ++G+C +G A+ LF
Sbjct: 383 VTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNS 442
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ C P+ T TTL+ G + A +L EM + + ++ +N ++S +
Sbjct: 443 L---PCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A+EL+ +M E + +T++T+ G+ + E +L ++ T T
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
++ R++ + ++ + D G P + +++ LC R + A + M+
Sbjct: 560 IVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS 619
Query: 453 RQVSEASYRML 463
+E++Y +L
Sbjct: 620 CMPNESTYVIL 630
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 137/313 (43%), Gaps = 15/313 (4%)
Query: 88 EFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
+ F+F + +PD ++ L L R ++ A EL++ + R + P+ +T +
Sbjct: 330 DAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFI 389
Query: 144 IMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+L + ++ + ++M E VGI + N L+ FC Q + A +F
Sbjct: 390 CILCQKGLI---DQAILLIEQMPEYGCSVGIVTY-----NALVNGFCVQGRVDSALELFN 441
Query: 203 KLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
L PN T LL G + + A EM+ +VVT+N+ + +C+KG
Sbjct: 442 SLPCE--PNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGF 499
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A+ L ++M C P+L T TL+ G N +A +L + + + D Y++
Sbjct: 500 VEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSS 559
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
++ L R + A+++ +++ + V Y+ + L K + + M+
Sbjct: 560 IVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNS 619
Query: 383 FVPKTRTVVMLMK 395
+P T V+L++
Sbjct: 620 CMPNESTYVILIE 632
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 22/267 (8%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
L++ +P+ + N L F ALE F P+ + L L
Sbjct: 404 LIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTI----TYTTLLTGL 459
Query: 114 ARMRYFDQAWELMSHV-QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG 172
D A EL++ + Q P L + + ++++S + EE +E +M
Sbjct: 460 CHAERLDAAAELLAEMMQNDCP--LNVVTFNVLVSFFCQKGFVEEAIELVQQM------- 510
Query: 173 IRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM--NILLLGFKESG 226
+ G FN LL +EA + L+S+ + +I+ + +E
Sbjct: 511 -MEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDR 569
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
A++MF H + G RP V YN + CK+ A+ F M +C+P+ T
Sbjct: 570 IEEAVQMF-HAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYV 628
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNL 313
LI G + +AR + E+ R +
Sbjct: 629 ILIEGLAREGLLKEARYVLSELCSRGV 655
>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
Length = 1059
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/366 (26%), Positives = 163/366 (44%), Gaps = 10/366 (2%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
P+ F + L +A+M FD L ++ S L S +I++ + + L
Sbjct: 613 PSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISH-DLYSFTILIHCFCRCSRFSLALA 671
Query: 161 AFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNIL 218
+M + F I GS LL FC +EA S+ + PN N +
Sbjct: 672 LLGKMMKLGFQPSIVTLGS-----LLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTV 726
Query: 219 LLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
+ G ++ D+ A+E+FY M +G VTYN I G C G + DA RL +M +
Sbjct: 727 INGLCKNRDLNNALEIFYG-MEKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRK 785
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P++ T LI N+ +A+ L+ EM +R++ P+I YN++I+ L A
Sbjct: 786 IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAK 845
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
+ D M K D VTY+T+ G KS +E KL+ M V T L+ +
Sbjct: 846 HMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGY 905
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSE 457
C ++++ ++ ++D G P ++L+ LC+ G+ E+A + + + V
Sbjct: 906 CQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDI 965
Query: 458 ASYRML 463
+Y ++
Sbjct: 966 ITYNII 971
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/371 (23%), Positives = 154/371 (41%), Gaps = 37/371 (9%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+F +H R F A L+ + + PS++TL S+ L+ + ++E +
Sbjct: 652 SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSL---LNGFCQGNRFQEAVSLV 708
Query: 163 DRMER---------------------------EIFVGIRKFG----SEEFNVLLQAFCTQ 191
D M EIF G+ K G + +N L+ C
Sbjct: 709 DSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNS 768
Query: 192 KEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
+A + ++ R PN L+ F + G++ + Y EM+ R P+++TY
Sbjct: 769 GRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTY 828
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N I+G+C +G GDA +F+ M C P + T TLI G + + +LF EM
Sbjct: 829 NSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTH 888
Query: 311 RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEG 370
+ L D YN +I + LN A ++ + M + + D VTY+ + L + +E
Sbjct: 889 QGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEK 948
Query: 371 VCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT 430
+ + + + + T ++++ C N +V L+ L +G A +++
Sbjct: 949 ALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMIS 1008
Query: 431 GLCSRGRWEEA 441
GLC G EA
Sbjct: 1009 GLCRNGLRREA 1019
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 96/441 (21%), Positives = 182/441 (41%), Gaps = 24/441 (5%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTL--H 111
L + Q+ PL S + RL A +N + F+ Q F + D + T+ H
Sbjct: 52 LFLEMVQSQPLPSVVD---FTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIH 108
Query: 112 ILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREI 169
R A ++ + + PS++T S+ + F +AF +
Sbjct: 109 CFCRCSRLSLALSILGKMMKLGYDPSIVTFGSL------LHGFCLRNRIHDAF-----SL 157
Query: 170 FVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFK 223
+ K G E +N L+ C ++ A + ++ R A + T N LL G
Sbjct: 158 VASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLC 217
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
SG+ +M R P V T+ ID + K+G +A L+++M + + P+
Sbjct: 218 YSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTV 277
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T +LI+G + ++ A++ FD M + P++ YN +I+ + R + M+L M
Sbjct: 278 TYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRM 337
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
+ + D TY+T+ G + L ++ M+ P T +L+ CVN +
Sbjct: 338 YREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEI 397
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+ + + A ++++ GLC + EEA+E ++ V + +Y ++
Sbjct: 398 GSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIM 457
Query: 464 QRYLVQANANEKLEDLDRMIK 484
L + + ++L R +K
Sbjct: 458 ILGLCKNGPRREADELFRRMK 478
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 123/267 (46%), Gaps = 22/267 (8%)
Query: 180 EFNVLLQAFCTQKEMKEARSV-----FVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
+F+ FC EM ++R + F ++L+ A NK ++ L
Sbjct: 595 KFDDAFGLFC---EMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYL-------------- 637
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+H+M G + ++ I I +C+ F A+ L +M ++ PS+ T+ +L++G
Sbjct: 638 FHKMENLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQ 697
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+A L D M + L+P++ YN +I+ L + RDLN A+E+ ME+K I D VT
Sbjct: 698 GNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVT 757
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+T+ GL S +L M++ K P L+ F + NL+ +I
Sbjct: 758 YNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMI 817
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEA 441
R P+ + L+ G C +GR +A
Sbjct: 818 RRSVHPNILTYNSLINGFCIQGRLGDA 844
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 83/205 (40%), Gaps = 1/205 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + A+ F + S+ PN T N L+ GF +S V + M
Sbjct: 279 YNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMY 338
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G TYN I GYC+ G A +F M P + T L+HG + I
Sbjct: 339 REGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIG 398
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A F++M I AYN MI L + + A EL + + + D TY M
Sbjct: 399 SAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMI 458
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFV 384
GL K+ +L+ RM E +
Sbjct: 459 LGLCKNGPRREADELFRRMKEDGII 483
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 107/254 (42%), Gaps = 19/254 (7%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
FT DAF K ++ D+A EL + ++ P+ +T S+ L + +
Sbjct: 244 FTALIDAFVKQGNL-------DEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAK 296
Query: 157 ETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKT 214
+T FD M + F + +N L+ FC + +++ +F ++ + T
Sbjct: 297 KT---FDLMASKGCFPNV-----VTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFT 348
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N L+ G+ + G + + + MV G P ++T+ I + G C G G AM F +M
Sbjct: 349 YNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMR 408
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ +IHG + +A +LF +P +KPD Y MI L +
Sbjct: 409 SGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRR 468
Query: 335 AAMELMDEMEEKRI 348
A EL M+E I
Sbjct: 469 EADELFRRMKEDGI 482
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 80/166 (48%), Gaps = 1/166 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K +++ +F ++ + + T N L+ G+ ++G + + ++ MV
Sbjct: 863 YNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMV 922
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P +VTYNI +D C G A+ + E++++ + T +I G +
Sbjct: 923 DCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVK 982
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
+A LF + ++ +K D AY MIS L R A +L M+E
Sbjct: 983 EAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKE 1028
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 102/236 (43%), Gaps = 9/236 (3%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F DA+ LF EM + LPS+ T L+ +R +M + D+ ++
Sbjct: 46 FEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTI 105
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDN--VTYHTMFFGLMKSSGLEGVCKLYDRMIE 380
+I RC L+ A+ ++ +M ++G+D VT+ ++ G + + L M++
Sbjct: 106 LIHCFCRCSRLSLALSILGKM--MKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVK 163
Query: 381 GKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-FCPHGHALDLLVTGLCSRGRWE 439
+ P L+ C N V++ L L + +G + L+TGLC G W
Sbjct: 164 SGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWR 223
Query: 440 EAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
+A + M RR ++ ++ ++ Q N +E E +M LQ+ + P T
Sbjct: 224 QAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQM---LQSSIGPNT 276
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 86/436 (19%), Positives = 166/436 (38%), Gaps = 58/436 (13%)
Query: 46 PDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDA 105
PD H LL L + S +V+ F +G K L A
Sbjct: 379 PDIITHCILLHGLCVNGEIGSAMVK------FNDMRSGEKYLGIV--------------A 418
Query: 106 FEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ +H L + ++AWEL V+ P ++ +IM+ + K E E F
Sbjct: 419 YNIMIHGLCKADKVEEAWELFCRLPVEGVKPDA---RTYTIMILGLCKNGPRREADELFR 475
Query: 164 RMEREIFVGIRKFG-------SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMN 216
RM+ + + + G + + ++ C ++ RS+ + ++ T+
Sbjct: 476 RMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRR----RSIMESGDLYYYYSDTTLW 531
Query: 217 ILLLGFKESGDVTAMEMFYHEMVL---RGFRPSVVTYN-----------------IRIDG 256
L+G ++++ F +L RG P +++ +R +
Sbjct: 532 SSLVGLIPIASSSSVKGFVRRHLLLLERGNNPESRSFSGASHHHHHHHHHHYRERLRSEL 591
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C K F DA LF EM + +PS+ T ++ + LF +M + D
Sbjct: 592 HCIK--FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHD 649
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ ++ +I RC + A+ L+ +M + VT ++ G + + + L D
Sbjct: 650 LYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVD 709
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M E P ++ C N ++ L ++ + +G + L++GLC+ G
Sbjct: 710 SMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSG 769
Query: 437 RWEEAFECSKQMLVRR 452
RW +A + M+ R+
Sbjct: 770 RWTDAARLLRDMVKRK 785
>gi|225453152|ref|XP_002272930.1| PREDICTED: pentatricopeptide repeat-containing protein At1g77360,
mitochondrial-like [Vitis vinifera]
Length = 502
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 109/470 (23%), Positives = 197/470 (41%), Gaps = 32/470 (6%)
Query: 26 TTTQSSEIERITRIINDHPFP--DQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNG 83
T S ++ + II + P ++ LH T ++ P+ S L G
Sbjct: 52 TPNLSPKVRLLCEIIANTPSSTVEEVLHDTAIRVSPEDVEDSLKLSYGFPG--------- 102
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMS 143
A++FF+++ + +P ++ + +L + FD W+ + +++ LL+L + +
Sbjct: 103 -SAVKFFRWSGHQLNDNHSPYSWNLVVDMLGKNFLFDAMWDAVKSMKKQ--GLLSLATFA 159
Query: 144 IMLSRISKFQSYEETLEAFDRME-----REIFVGIRKFGSEEFNVLLQAFCTQKEMKEAR 198
+ S E + FD ME R+I N LL A C +A
Sbjct: 160 SIFSSYVIADRVREAIMTFDVMEQYGCPRDIVA---------LNSLLSAICRDGRTVQAA 210
Query: 199 SVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGY 257
+ P+ T ILL G++ G+ A + EMV+ G+ P V+
Sbjct: 211 EFLRNVRGLIRPDADTYAILLEGWESEGNCGAARQTFDEMVMDIGWDPGNVSAYDSFLNA 270
Query: 258 CKKGCFG--DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL-K 314
G G +AM+ FE M C P ++ + + A+ L+ M RN+ +
Sbjct: 271 LLHGPDGRREAMKFFEIMRDRQCSPGMRFYRIGLQECVKTSDSKGAQLLWQTMLSRNICR 330
Query: 315 PDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKL 374
PD YN+MI+ C ++ A ++DEM D+ TY+ +F L++ LE +
Sbjct: 331 PDTEMYNSMIALHCSCDNIVMARGMLDEMVCNGAFPDSETYNVLFRFLIRRRKLEEAFSI 390
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
+ M++ + VP ++ + V + +W Y+I+ +LLVTGL
Sbjct: 391 FSEMVQNECVPDLTNCNAAVRIYLDLGDVYKAIKVWKYIIENHDSGLEETGNLLVTGLRD 450
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
R EA + +K M+VR +++ ++ L+ LV+ ++L R K
Sbjct: 451 HDRIPEAVKYAKDMIVRGIKLTSSTLSKLKHALVEVGKGPVYDELLRKWK 500
>gi|297734265|emb|CBI15512.3| unnamed protein product [Vitis vinifera]
Length = 660
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 100/359 (27%), Positives = 146/359 (40%), Gaps = 45/359 (12%)
Query: 76 LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQA----WELMSHVQR 131
L S+ AL FF + P+ + +H LA R F QA EL+ V+
Sbjct: 107 LLRCQSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKD 166
Query: 132 THPSLLTLKSM--------------SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFG 177
PS K++ +++ + E L +F RM R FV
Sbjct: 167 DLPSEDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITS 226
Query: 178 SEEFNVLLQAFCTQK--EMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFY 235
+ N LL+ T + E+ E F APN T NIL + GD + F
Sbjct: 227 NYLLNGLLKLNYTDRCWEVYEEMERF-----GIAPNLYTFNILTHVLCKDGDTGKVNKFL 281
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+M GF P +VTYN I+ YC+KG DA L++ M R +P L + T L++G
Sbjct: 282 EKMEEEGFDPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKE 341
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A QLF M R L PDI YN +I + + + L+ +M I D+ T
Sbjct: 342 GRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWNGISPDSFTC 401
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+ G K EGKF+ VV L + F V + +++ YLI
Sbjct: 402 WVLVEGYGK---------------EGKFLSALNLVVELQR-----FGVSISQDIYSYLI 440
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/390 (22%), Positives = 153/390 (39%), Gaps = 47/390 (12%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYE 156
F PT L+ L ++ Y D+ WE+ ++R P+L T ++ +L +
Sbjct: 219 FVPTVITSNYLLNGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVN 278
Query: 157 ETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
+ LE +ME E F +N L+ ++C + + +A ++ + R P+ +
Sbjct: 279 KFLE---KMEEEGF----DPDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSY 331
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
L+ G + G V +H MV RG P +VTYN I GYCK+G ++ L +M
Sbjct: 332 TALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIW 391
Query: 276 VACLPSLQTITTLIHGAG---------------------LVRNIHQ-------------- 300
P T L+ G G + ++I+
Sbjct: 392 NGISPDSFTCWVLVEGYGKEGKFLSALNLVVELQRFGVSISQDIYSYLIVALCRENRPFA 451
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
A+ L + M K KP++ YN +I S +C + A+ L EM +K I + TY +
Sbjct: 452 AKNLLERMSKDGHKPELEIYNELIKSFCQCDCIAEALLLKMEMVDKEIKPNLATYRAVIG 511
Query: 361 GLMK-SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L + S +EG L M+ +P L +C +D +L +
Sbjct: 512 CLSRLSRSMEGE-SLVGEMVASGMLPDLEICRALFYGYCRENDIDKAESLLSFFAKEFQI 570
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQML 449
+ + L+ ++G + E ML
Sbjct: 571 HDTESFNALIRITSAKGDIARSLEIQDMML 600
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 89/194 (45%)
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
V +++ + Y + G + +R F M RV +P++ T L++G + + ++++E
Sbjct: 189 VVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLLNGLLKLNYTDRCWEVYEE 248
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M + + P++ +N + L + D + +++MEE+ D VTY+T+ +
Sbjct: 249 MERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFDPDIVTYNTLINSYCRKGR 308
Query: 368 LEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDL 427
L+ LY M VP + LM C RV L+ ++ RG P +
Sbjct: 309 LDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQLFHRMVHRGLSPDIVTYNT 368
Query: 428 LVTGLCSRGRWEEA 441
L+ G C G+ +E+
Sbjct: 369 LIHGYCKEGKMQES 382
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 106/282 (37%), Gaps = 20/282 (7%)
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC--LPS 281
+S TA+ F G RPS Y I + F AM+ E+ + LPS
Sbjct: 111 QSDSFTALSFFNWVKNDLGLRPSTQNYCIVVHTLAWSRNFSQAMKFLCELVELVKDDLPS 170
Query: 282 LQTITTLIHGAG-----------LVR------NIHQARQLFDEMPKRNLKPDIGAYNAMI 324
LI LV+ + + + F M + P + N ++
Sbjct: 171 EDVFKNLILCTEDCNWDPVVFDMLVKAYLRMGRVREGLRSFRRMLRVGFVPTVITSNYLL 230
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
+ L++ + E+ +EME I + T++ + L K V K ++M E F
Sbjct: 231 NGLLKLNYTDRCWEVYEEMERFGIAPNLYTFNILTHVLCKDGDTGKVNKFLEKMEEEGFD 290
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T L+ +C R+D L+ + RG P + L+ GLC GR EA +
Sbjct: 291 PDIVTYNTLINSYCRKGRLDDAFYLYKIMYRRGVVPDLVSYTALMNGLCKEGRVREAHQL 350
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+M+ R +Y ++ Y + E L MI N
Sbjct: 351 FHRMVHRGLSPDIVTYNTLIHGYCKEGKMQESRSLLHDMIWN 392
>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
At2g02150
gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 761
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 122/464 (26%), Positives = 194/464 (41%), Gaps = 42/464 (9%)
Query: 25 STTTQSSEIER--ITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSN 82
T+T S + +R I +++++ + D P L + T L+ V VL L +
Sbjct: 71 GTSTYSEDFDRDWIRKVVHNDLWDD----PGLEKLFDLT--LAPIWVPRVLVEL---KED 121
Query: 83 GLKALEFFKFTLQHPHFTPTPDAFEKTLHIL--ARMRYFDQAWELMSHVQRTHPSLLTLK 140
A +FFK+++ F + +++ HIL ARM Y + LK
Sbjct: 122 PKLAFKFFKWSMTRNGFKHSVESYCIVAHILFCARMYYDANS---------------VLK 166
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
M +LS+ + FD + V + FG F+ L ++EA
Sbjct: 167 EM--VLSKAD--------CDVFDVLWSTRNVCVPGFGV--FDALFSVLIDLGMLEEAIQC 214
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F K+ R P ++ N LL F + G ++ F+ +M+ G RP+V TYNI ID CK
Sbjct: 215 FSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCK 274
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+G A LFEEM+ +P T ++I G G V + F+EM +PD+
Sbjct: 275 EGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVIT 334
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YNA+I+ + L +E EM+ + + V+Y T+ K ++ K Y M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
VP T L+ C + L ++ G + L+ GLC R +
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQRYLVQA-NANEKLEDLDRM 482
EA E +M + ASY L V+A N + LE L+ +
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNEL 498
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 89/385 (23%), Positives = 165/385 (42%), Gaps = 7/385 (1%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
P F+ +L + ++A + S ++R T +S + +L R +K ++
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKT-RSCNGLLHRFAKLGKTDDVK 247
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
F M I G R +N+++ C + +++ AR +F ++ R P+ T N +
Sbjct: 248 RFFKDM---IGAGARP-TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSM 303
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ GF + G + F+ EM P V+TYN I+ +CK G + + EM+
Sbjct: 304 IDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGL 363
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++ + +TL+ + QA + + +M + L P+ Y ++I + + +L+ A
Sbjct: 364 KPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFR 423
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
L +EM + + + VTY + GL + ++ +L+ +M +P + L+ F
Sbjct: 424 LGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFV 483
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
+D L L L RG P + GLCS + E A +M + +
Sbjct: 484 KAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSL 543
Query: 459 SY-RMLQRYLVQANANEKLEDLDRM 482
Y ++ Y N E L LD M
Sbjct: 544 IYTTLMDAYFKSGNPTEGLHLLDEM 568
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/340 (23%), Positives = 140/340 (41%), Gaps = 38/340 (11%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC ++ + ++ PN + + L+ F + G + FY +M
Sbjct: 335 YNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMR 394
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+ TY ID CK G DA RL EM +V ++ T T LI G +
Sbjct: 395 RVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMK 454
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF +M + P++ +YNA+I ++ ++++ A+EL++E++ + I D + Y T
Sbjct: 455 EAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFI 514
Query: 360 FGL---------------MKSSGLEGVCKLY--------------------DRMIEGKFV 384
+GL MK G++ +Y D M E
Sbjct: 515 WGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIE 574
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLI-DRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T +L+ C N V ++ + + D G + ++ GLC + E A
Sbjct: 575 VTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATT 634
Query: 444 CSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRM 482
+QM+ + +Y ++ Q N E L D+M
Sbjct: 635 LFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKM 674
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 103/231 (44%), Gaps = 6/231 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ + C+ ++++ A+ V ++ N+ L+ + +SG+ T EM
Sbjct: 510 YGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMK 569
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTI-TTLIHGAGLVRNI 298
+VVT+ + IDG CK A+ F + L + I T +I G +
Sbjct: 570 ELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQV 629
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A LF++M ++ L PD AY +++ + ++ A+ L D+M E + D + Y ++
Sbjct: 630 EAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDLLAYTSL 689
Query: 359 FFGLMKSSGLEGVCKLYDRMI-EGKFVPKTRTVVMLMKFF---CVNFRVDL 405
+GL + L+ + MI EG + + +L K + C++ V+L
Sbjct: 690 VWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVEL 740
>gi|255660774|gb|ACU25556.1| pentatricopeptide repeat-containing protein [Verbena orcuttiana]
Length = 418
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 147/352 (41%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVFDAIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ + M G +P V TY++ I+G CK+
Sbjct: 164 KWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L D+ YN +I
Sbjct: 224 DANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 130/313 (41%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T ++ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVLEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHSFVKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K +L+P + ++N +++ I+ DL+ L + M+ + D TY
Sbjct: 151 EIRLAQSVFDAITKWSLRPSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
+ L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLSADLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 102/257 (39%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGDLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ + + T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSADLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYMPSV 416
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 50/107 (46%), Gaps = 5/107 (4%)
Query: 181 FNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+ L+ C + +++ A R +K R ++ L+ G + G E E
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAEKMLRE 371
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
M+ G +P + TY + I+ +CKKG +L +EM+R +PS+ T
Sbjct: 372 MLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYMPSVVT 418
>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
lyrata]
Length = 1147
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N+ ++A C + +AR + L S AP+ + N L+ G+ + + + ++
Sbjct: 382 YNIYIRALCEFGRIDDAREL---LSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKA 438
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
PS+VTYN IDG C+ G A RL EEM P + T TTL+ G N+
Sbjct: 439 GNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSM 498
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYHTMF 359
A +++DEM ++ +KPD AY +R D A L +EM E D Y+
Sbjct: 499 ATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRI 558
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K LE + ++ VP T +++ + R + +L+ ++ +
Sbjct: 559 DGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLS 618
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P +L+ G GR E+AF+ S +M R
Sbjct: 619 PSVITYFVLIHGHAKAGRLEQAFQYSTEMKKR 650
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 97/363 (26%), Positives = 150/363 (41%), Gaps = 31/363 (8%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
F P+ L +L R ++A E+ H + T+ + + ML K E
Sbjct: 235 FLPSVRNCNIVLRVLRDSRMMNKAQEVY-ETMVMHGIMPTVITFNTMLDSCFKAGDLERV 293
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNI 217
+ + M+R +F +N+L+ F +M+EAR + S F + N
Sbjct: 294 DKIWLEMKRRNI----EFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNP 349
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G+ + G EM+ G P+ TYNI I C+ G DA L M
Sbjct: 350 LIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM---- 405
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
P + + TL+HG +R +A LFD++ N+ P I YN +I L +L A
Sbjct: 406 AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQ 465
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK-----TRTVVM 392
L +EM + I D +TY T+ G +K+ L ++YD M+ P TRTV
Sbjct: 466 RLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGE 525
Query: 393 LMKFFCVNFRVDLGLNLWGY-LIDRGFCPHGHALDLL-----VTGLCSRGRWEEAFECSK 446
L LG + + L + HA DL + GLC G E+A E +
Sbjct: 526 LR----------LGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQR 575
Query: 447 QML 449
++
Sbjct: 576 KIF 578
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 97/441 (21%), Positives = 171/441 (38%), Gaps = 51/441 (11%)
Query: 66 STLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWEL 125
S + N+L F+ S ++ F +Q F TP +F + + FD+AW +
Sbjct: 308 SEVTYNILINGFSK-SGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGV 366
Query: 126 MSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ +P T + +I + + +F ++ E M V +N
Sbjct: 367 TDEMLNAGIYP---TTSTYNIYIRALCEFGRIDDARELLSSMAAPDVVS--------YNT 415
Query: 184 LLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
L+ + ++ EA +F L P+ T N L+ G ESG++ + EM +
Sbjct: 416 LMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQL 475
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P V+TY + G+ K G A +++EM R P TT G + + +A
Sbjct: 476 IYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSEKAF 535
Query: 303 QLFDEM-PKRNLKPDIGAYNAMISSLIRCRDLNAAME----------------------- 338
+L +EM + + PD+ YN I L + +L A+E
Sbjct: 536 RLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRG 595
Query: 339 ------------LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L DEM KR+ +TY + G K+ LE + M + P
Sbjct: 596 YLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPN 655
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+ C +D + + G P+ ++ +L++ C +WEE + K
Sbjct: 656 VMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYK 715
Query: 447 QMLVRRRQVSEASYRMLQRYL 467
+ML + + ++R L ++L
Sbjct: 716 EMLDKEIEPDGYTHRALFKHL 736
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 181 FNVLLQAFCTQKEMKEA----RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+NV + C +++A R +F L P++ T ++ G+ E G Y
Sbjct: 554 YNVRIDGLCKVGNLEKAIEFQRKIFRVGL---VPDHVTYTTVIRGYLEKGRFKMARDLYD 610
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ + PSV+TY + I G+ K G A + EM++ P++ T L+HG
Sbjct: 611 EMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAG 670
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
NI +A + +M + + P+ +Y +IS ++L EM +K I D T+
Sbjct: 671 NIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHR 730
Query: 357 TMFFGLMK 364
+F L K
Sbjct: 731 ALFKHLEK 738
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/192 (22%), Positives = 84/192 (43%)
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y KK + FE+M R LPS++ ++ R +++A+++++ M + P
Sbjct: 214 YTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPT 273
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ +N M+ S + DL ++ EM+ + I VTY+ + G KS +E + +
Sbjct: 274 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHG 333
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M F + L++ +C D + +++ G P ++ + LC G
Sbjct: 334 DMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFG 393
Query: 437 RWEEAFECSKQM 448
R ++A E M
Sbjct: 394 RIDDARELLSSM 405
>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
Length = 650
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/399 (21%), Positives = 165/399 (41%), Gaps = 5/399 (1%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
L +P+ N+L F + L A E ++ L+ P P ++ ++ L
Sbjct: 206 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 265
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ FD+++E+ H + + L + S ++ + L+ R+ +E+
Sbjct: 266 CKCGKFDESFEIW-HRMKKNERGQDLYTYSTLIHGLCG----SGNLDGATRVYKEMAENG 320
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
+N +L + ++E ++ + + NIL+ G E+ V
Sbjct: 321 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAIS 380
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ + + +TY + + G CK G A+ + EE E +++I+G
Sbjct: 381 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 440
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + D+M K KP+ NA+I+ +R L A+ M K V
Sbjct: 441 REGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 500
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ GL K+ L M+ + P T +LM C ++D+ LNLW
Sbjct: 501 TYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 560
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
+++GF P ++++ GLCS G+ E+A + +M R+
Sbjct: 561 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 49/430 (11%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
SN E F + +P + + I R + FD+A EL++ + Q P +
Sbjct: 127 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVF- 185
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
S +++ ++K + L+ FD M ER + + + N+L+ F + ++ A
Sbjct: 186 --SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY-----NILIDGFFKKGDILNA 238
Query: 198 RSVFVKLLS--RFAPNNKTMNILLLG------FKES------------------------ 225
++ +LL PN + N+++ G F ES
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298
Query: 226 -----GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G++ Y EM G P VV YN ++GY + G + + L++ ME+ C
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-R 357
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ + LI G + +A +++ +P+++ D Y ++ L + LN A+ ++
Sbjct: 358 TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+E E R D Y +M GL + L+ V + D+M + P ++ F
Sbjct: 418 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRA 477
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+++ L +G ++ +G P + L+ GL R+ EA+ K+ML + + + +Y
Sbjct: 478 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITY 537
Query: 461 RMLQRYLVQA 470
+L L Q
Sbjct: 538 SLLMNGLCQG 547
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 98/201 (48%), Gaps = 1/201 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C + + E V ++ PN N ++ GF + + F+ MV
Sbjct: 432 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMV 491
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+VVTYN I+G K F +A L +EM P++ T + L++G + +
Sbjct: 492 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLD 551
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L+ + ++ KPD+ +N +I L + A++L EM++++ + VT++T+
Sbjct: 552 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLM 611
Query: 360 FGLMKSSGLEGVCKLYDRMIE 380
G K E K++D +++
Sbjct: 612 EGFYKVRDFERASKIWDHILQ 632
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 60/271 (22%), Positives = 118/271 (43%), Gaps = 2/271 (0%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
P + + ++ K S A+++F + G +P + +YN ++ + + +A
Sbjct: 76 CPEDVALTVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAES 135
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
F E + P+LQT LI + + +A++L + M ++ PD+ +Y +I+SL
Sbjct: 136 FFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLA 195
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKT 387
+ ++ A++L DEM E+ + D Y+ + G K + ++++R+++G V P
Sbjct: 196 KNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNI 255
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
+ +++ C + D +W + + L+ GLC G + A K+
Sbjct: 256 PSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKE 315
Query: 448 MLVRRRQVSEASYR-MLQRYLVQANANEKLE 477
M Y ML YL E LE
Sbjct: 316 MAENGVSPDVVVYNTMLNGYLRAGRIEECLE 346
>gi|255660812|gb|ACU25575.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
Length = 418
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 150/353 (42%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K L L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ +F + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHSFVKEGEIRLAQSVF-DAI 162
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ + G++ + M G +P V TY++ I+G CK+
Sbjct: 163 TKWGLRPSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKM 222
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 223 DDANELFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTL 282
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L DEM K + D +TY T+ G K LE + RMI+
Sbjct: 283 IYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENI 342
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 343 RLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ N+ + +L + M ++PD+ Y+ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KLGNLDEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANELFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLTDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIKENIRLDDVAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/257 (21%), Positives = 103/257 (40%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L + +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKLGNLDEGFRLKNAMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ +P+ T
Sbjct: 226 NELFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY------------------------- 250
N L+ G + GD+ + EM ++G +P +TY
Sbjct: 280 NTLIYGLCKKGDLKQAQDLTDEMSMKGLKPDKITYTTLIDGSCKEGHLETAFEYRKRMIK 339
Query: 251 -NIR---------IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
NIR I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 400 GSKLLKEMQRDGYAPSV 416
Score = 42.4 bits (98), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 34/67 (50%)
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
L+ G + G E EM+ G +P + TY + I+ +CKKG +L +EM+R
Sbjct: 352 LISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDG 411
Query: 278 CLPSLQT 284
PS+ T
Sbjct: 412 YAPSVVT 418
>gi|356561399|ref|XP_003548969.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g12300, mitochondrial-like [Glycine max]
Length = 422
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 175/381 (45%), Gaps = 16/381 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
TP F K L +M+Y+ A L V+ P+L+TL + I+ F
Sbjct: 51 TPPIIKFNKILGSPVKMKYYPAAISLSKQMEVKGIEPNLVTLNIL------INCFCHLGH 104
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMN 216
+F + + + +G + + L++ C + E++++ KL+++ F N+ +
Sbjct: 105 MAFSFSVLGKILKLGYQP-NTLTLTTLIKGLCLKDEVRKSLHFHDKLVAQGFQINHVSCG 163
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
LL G + G++ + R +VV YN IDG CK +A L+ EM+
Sbjct: 164 TLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYNTIIDGLCKDKLVNEAYDLYSEMDVR 223
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA- 335
P++ T TLI G L + +A L EM +N+ PD+ YN ++ +L C++ +
Sbjct: 224 GNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDAL--CKEGKSY 281
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A++L+DE+ +R D VTY ++ G K+ L+ L+ +M E + P T L
Sbjct: 282 ALDLIDEIHRRRQPADVVTYTSLLDGXCKNXYLDKAIALFKKMKERRIQPNVYTHSXLTG 341
Query: 396 FFCV-NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
CV R+ + +L+ +G+C ++++GLC G +EA +M
Sbjct: 342 --CVKGGRLKNAQEFFQHLLVKGYCIDVWTYTVMISGLCKEGMLDEALAMKXKMEDNGCI 399
Query: 455 VSEASYRMLQRYLVQANANEK 475
+ ++ ++ L + + N+K
Sbjct: 400 PNAVTFEIIICSLFEKDENDK 420
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/246 (19%), Positives = 111/246 (45%), Gaps = 35/246 (14%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
+M ++G P++VT NI I+ +C G + + ++ ++ P+ T+TTLI G L
Sbjct: 79 QMEVKGIEPNLVTLNILINCFCHLGHMAFSFSVLGKILKLGYQPNTLTLTTLIKGLCLKD 138
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+ ++ D++ + + + + +++ L + ++ AM+L+ +E++ + V Y+
Sbjct: 139 EVRKSLHFHDKLVAQGFQINHVSCGTLLNGLCKIGEMRGAMKLLRVIEDRSTITNVVMYN 198
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
T+ ++G+CK D+++ + +L+ + R
Sbjct: 199 TI---------IDGLCK--DKLVNEAY------------------------DLYSEMDVR 223
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
G P+ L+ G C G+ EAF K+M+++ +Y +L L + + L
Sbjct: 224 GNFPNVITYHTLICGFCLAGQLMEAFGLLKEMILKNIDPDVYTYNILMDALCKEGKSYAL 283
Query: 477 EDLDRM 482
+ +D +
Sbjct: 284 DLIDEI 289
>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
Length = 616
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 99/397 (24%), Positives = 173/397 (43%), Gaps = 22/397 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS---HVQRTHPSLLTLKSM 142
AL +F L H P F K L + +MR++ A +S + P TL +
Sbjct: 105 ALAYFNHML-HRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
I+ F + F + + I +G+ + FN L+ C + +A +F
Sbjct: 164 ------INCFFQLQRVDLGFSVLAKIIKLGL-QLTIVTFNTLINGLCKVGKFGQAVELFD 216
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+++R + P+ T ++ G + G+ A + +M G +P VVTY+ ID CK
Sbjct: 217 DMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDR 276
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+A+ +F M+ P++ T +LI G +A + +EM N+ P+I ++
Sbjct: 277 RVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFS 336
Query: 322 AMISSLIRCRDLNA--AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+I+ I C++ N A ++ M E + + VTY ++ G + + KL+D MI
Sbjct: 337 LLIN--IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
P + +L+ +C R+ L+ +I +G P + + L+ GLC GR
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454
Query: 440 EAFECSKQMLVRRRQVSEASYRML------QRYLVQA 470
EA + K ML +Y +L Q YL +A
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 149/338 (44%), Gaps = 8/338 (2%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
P ++T S ++ + K + E L+ F M+ + GI +N L+Q C
Sbjct: 259 QPDVVTY---STIIDSLCKDRRVNEALDIFSYMKAK---GISP-NIFTYNSLIQGLCNFS 311
Query: 193 EMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYN 251
+EA ++ +++S PN T ++L+ F + G+V M G P+VVTY+
Sbjct: 312 RWREASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYS 371
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
++GY + +A +LF+ M C P + + LI+G + I +A+QLF+EM +
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
L PDI +YN +I L + L A +L M D TY + G K L
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
+L+ M P +L+ C + + L+ L +G P+ ++ G
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
LC G +EA E + M +E SY ++ R +Q
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQ 589
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 103/211 (48%), Gaps = 1/211 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N+L+ +C K + EA+ +F +++ + P+ + N L+ G + G + + M
Sbjct: 404 SYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNM 463
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G P + TY+I +DG+CK+G A RLF M+ P++ LI RN+
Sbjct: 464 LTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNL 523
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+AR+LF E+ + L+P++ Y +I+ L + L+ A+E MEE + +Y+ +
Sbjct: 524 KEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVI 583
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRT 389
G ++ +L M E FV T
Sbjct: 584 IRGFLQHKDESRAVQLIGEMREKGFVADVAT 614
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/336 (22%), Positives = 146/336 (43%), Gaps = 12/336 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + + L + R ++A ++ S+++ P++ T S+ L S+++
Sbjct: 260 PDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM 319
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
L + M I I F ++L+ FC + + EAR V +K ++ PN T +
Sbjct: 320 LN--EMMSLNIMPNIVTF-----SLLINIFCKEGNVFEARGV-LKTMTEMGVEPNVVTYS 371
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G+ +V + M+ +G +P V +YNI I+GYCK G+A +LF EM
Sbjct: 372 SLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQ 431
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P + + TLI G + + +A LF M PD+ Y+ ++ + L A
Sbjct: 432 GLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKA 491
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
L M+ + + V Y+ + + KS L+ KL+ + P + ++
Sbjct: 492 FRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIING 551
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
C +D L + + + G P+ + ++++ G
Sbjct: 552 LCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/239 (26%), Positives = 121/239 (50%), Gaps = 1/239 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ L+ + Q E+ EAR +F ++++ P+ + NIL+ G+ ++ + + ++EM+
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P +V+YN IDG C+ G +A LF+ M LP L T + L+ G +
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLA 489
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A +LF M LKP++ YN +I ++ + R+L A +L E+ + + + Y T+
Sbjct: 490 KAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTII 549
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
GL K L+ + + M E P + ++++ F + + L G + ++GF
Sbjct: 550 NGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGF 608
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/386 (21%), Positives = 172/386 (44%), Gaps = 80/386 (20%)
Query: 102 TPDAFEKTLHILA----RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
+PD + TLH+L +++ D + +++ + + L T+ + + +++ + K + +
Sbjct: 154 SPDTY--TLHMLINCFFQLQRVDLGFSVLAKIIKLGLQL-TIVTFNTLINGLCKVGKFGQ 210
Query: 158 TLEAFDRM-----------EREIFVGIRKFGSE--------------------EFNVLLQ 186
+E FD M I G+ K G ++ ++
Sbjct: 211 AVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIID 270
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG---FKESGDVTAMEMFYHEMVLRG 242
+ C + + EA +F + ++ +PN T N L+ G F + +AM +EM+
Sbjct: 271 SLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAM---LNEMMSLN 327
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P++VT+++ I+ +CK+G +A + + M + P++ T ++L++G L + +AR
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEAR 387
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
+LFD M + KPD+ +YN +I+ + + + A +L +EM + + D V+Y+T+
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTL---- 443
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
++G+C+L R+ E +L+ ++ G P
Sbjct: 444 -----IDGLCQL-GRLREAH-------------------------DLFKNMLTNGNLPDL 472
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQM 448
+L+ G C +G +AF + M
Sbjct: 473 CTYSILLDGFCKQGYLAKAFRLFRAM 498
>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
Length = 819
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 120/249 (48%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ N L+ + G + E ++ M +G P+ VTY+I ID +CK+G A+
Sbjct: 352 APSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALH 411
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+M V ++ ++LI G + + A+ LFDEM LKP++ Y ++IS
Sbjct: 412 FLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYC 471
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ +L+ A L EM K I + T+ + GL ++ + KL+ M+E +P
Sbjct: 472 KEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEV 531
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
T +L++ C L ++++G P + L++GLCS GR EA E +
Sbjct: 532 TYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDL 591
Query: 449 LVRRRQVSE 457
+++++E
Sbjct: 592 QGEQQKLNE 600
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 140/328 (42%), Gaps = 18/328 (5%)
Query: 161 AFDRMEREIFVGIRKFGSEE----FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
AFD + + ++KFG +N L+ + C ++ EA S+F + + PN+ T
Sbjct: 339 AFDLVNK-----VKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTY 393
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
+IL+ F + G + F +M G + +V Y+ I G+CK G A LF+EM
Sbjct: 394 SILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIA 453
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T+LI G +H A +L+ EM + + P+ + A+IS L +
Sbjct: 454 NGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAE 513
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +L EM E + + VTY+ + G K +L D M+E VP T T L+
Sbjct: 514 ANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLIS 573
Query: 396 FFCVNFRVDLGLNLWGYLIDR--------GFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
C RV L G P+ L+ GLC G ++A ++
Sbjct: 574 GLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCRE 633
Query: 448 MLVRRRQVSEASYRMLQRYLVQANANEK 475
ML ++ +Y YL EK
Sbjct: 634 MLASNSLPNQNTYACFLDYLTSEGNIEK 661
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/293 (26%), Positives = 128/293 (43%), Gaps = 12/293 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGF-KESGDVTAMEMFYHEM 238
F L+ C M EA +F +++ PN T N+L+ G KE V A E+ EM
Sbjct: 498 FTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELL-DEM 556
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM--------ERVACLPSLQTITTLIH 290
V +G P TY I G C G +A ++ E CLP++ T T LI+
Sbjct: 557 VEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALIN 616
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + + +A L EM N P+ Y + L ++ A++L D + E +
Sbjct: 617 GLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLA- 675
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ VTY+ + G K ++ ++ MI+ P + ++ +C + + LW
Sbjct: 676 NTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLW 735
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
+++RG P A + L+ G C G +AFE M+ R + + A+Y L
Sbjct: 736 ESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 788
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 90/389 (23%), Positives = 157/389 (40%), Gaps = 13/389 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P L+ L R+R F A L + + P + ++ L + F E
Sbjct: 178 PQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREV 237
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMN 216
+ + ++ V +NV ++ C + + EA + LLS + T
Sbjct: 238 IGRMESSGCDLSVAT-------YNVFIRGLCKNQRVWEAVEI-KNLLSYKGLRADVGTYC 289
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+LG + + A E +EM+ GF PS + +DG KKG G A L ++++
Sbjct: 290 TLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKF 349
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
PSL LI+ + +A LF+ M + L P+ Y+ +I S + L+ A
Sbjct: 350 GVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVA 409
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
+ + +M E I Y ++ G K L L+D MI P L+
Sbjct: 410 LHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISG 469
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVS 456
+C + L+ + +G P+ + L++GLC R EA + +M+ +
Sbjct: 470 YCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPN 529
Query: 457 EASYRML-QRYLVQANANEKLEDLDRMIK 484
E +Y +L + + + N E LD M++
Sbjct: 530 EVTYNVLIEGHCKEGNTVRAFELLDEMVE 558
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 96/448 (21%), Positives = 179/448 (39%), Gaps = 32/448 (7%)
Query: 58 LPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ------HPHFTPTPDAFEKTLH 111
LPQ LS L NGL + F+ L P + +
Sbjct: 177 LPQIRTLSGVL-------------NGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVR 223
Query: 112 ILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV 171
L ++ F +A E++ ++ + L ++ + ++ + + K Q E +E + + +
Sbjct: 224 SLCELKDFIRAREVIGRMESSGCDL-SVATYNVFIRGLCKNQRVWEAVEIKNLLS---YK 279
Query: 172 GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTA 230
G+R + L+ C +E + + +++ F P+ ++ L+ G ++ G++ +
Sbjct: 280 GLRA-DVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGS 338
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
+++ G PS+ YN I+ CK G +A LF M P+ T + LI
Sbjct: 339 AFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILID 398
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ A +M + +K + Y+++IS + L AA L DEM +
Sbjct: 399 SFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKP 458
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
+ V Y ++ G K L +LY M P T T L+ C R+ L+
Sbjct: 459 NVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLF 518
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ- 469
G +++ P+ ++L+ G C G AFE +M+ + +YR L L
Sbjct: 519 GEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCST 578
Query: 470 ---ANANEKLEDL---DRMIKNLQAVLP 491
+ A E + DL + + ++ LP
Sbjct: 579 GRVSEAREFMNDLQGEQQKLNEIEGCLP 606
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 6/189 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDV-TAMEMFYHEM 238
+ L+ C M +A + ++L S PN T L G++ A+++ H++
Sbjct: 611 YTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQL--HDV 668
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+L GF + VTYNI I G+CK G +A + M P + +T+I+ ++
Sbjct: 669 LLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDL 728
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +L++ M R + PD AYN +I +L A EL D+M + + + TY+++
Sbjct: 729 KEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSL 788
Query: 359 FFG--LMKS 365
G LM S
Sbjct: 789 IHGTCLMSS 797
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 78/179 (43%)
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
D + + M LP ++T++ +++G +R A LFDE+ L+PD+ Y A++
Sbjct: 163 DGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVV 222
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
SL +D A E++ ME TY+ GL K+ + ++ + +
Sbjct: 223 RSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLR 282
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T L+ C + G + +I+ GF P A+ LV GL +G AF+
Sbjct: 283 ADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFD 341
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 100/262 (38%), Gaps = 43/262 (16%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NVL++ C + A + +++ + P+ T L+ G +G V+ F +++
Sbjct: 533 YNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQ 592
Query: 240 --------LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM---------ERVAC---- 278
+ G P+VVTY I+G CK G A L EM AC
Sbjct: 593 GEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDY 652
Query: 279 ---------------------LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
L + T LI G + I +A ++ M + PD
Sbjct: 653 LTSEGNIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712
Query: 318 GAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR 377
+Y+ +I R DL A++L + M + + D V Y+ + +G + L +L D
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772
Query: 378 MIEGKFVPKTRTVVMLMKFFCV 399
M+ P T L+ C+
Sbjct: 773 MMRRGVKPNRATYNSLIHGTCL 794
>gi|255660822|gb|ACU25580.1| pentatricopeptide repeat-containing protein [Mulguraea scoparia]
Length = 418
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/352 (25%), Positives = 145/352 (41%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K + L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVIEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ FC E+ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHNFCKGGEIXLAQSVFDSIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ M G +P V TY++ I+G CK+
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 121/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKGGEIXLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A L DEM + + + V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTYSVLINGLCKESKMDDANALFDEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISXLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/313 (23%), Positives = 128/313 (40%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T I+ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKGG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L M+ + D TY
Sbjct: 151 EIXLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTYS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANALFDEMLDNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++A + +M ++ + + +Y L+ N E
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/257 (20%), Positives = 100/257 (38%), Gaps = 49/257 (19%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L S +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTY---SVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
FD M V G+ F L+ C + A ++ ++LS+ P+ T
Sbjct: 226 NALFDEMLDNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG----------- 264
N L+ G + GD+ + EM ++G +P +TY IDG CK+G
Sbjct: 280 NTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 265 ------------------------DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
DA ++ EM V P + T T +I+ ++
Sbjct: 340 ENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 301 ARQLFDEMPKRNLKPDI 317
+L EM + P++
Sbjct: 400 GSKLLKEMQRDGYLPNV 416
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 59/140 (42%), Gaps = 36/140 (25%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDV----------- 228
+N L+ C + ++K+A+ + ++ + P+ T L+ G + GD+
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMI 338
Query: 229 -----------TAM-------------EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
TA+ E EM+ G +P + TY + I+ +CKKG
Sbjct: 339 KENIRLDDVAYTALISXLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVW 398
Query: 265 DAMRLFEEMERVACLPSLQT 284
+L +EM+R LP++ T
Sbjct: 399 TGSKLLKEMQRDGYLPNVVT 418
>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At4g11690-like [Glycine max]
Length = 556
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 104/429 (24%), Positives = 175/429 (40%), Gaps = 24/429 (5%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ 121
TPL +V + +HS +AL F + H P + F L +L R YFD+
Sbjct: 89 TPLYDAIVNAYV----HSHSTD-QALTFLHHMIHEGH-APLSNTFNNLLCLLIRSNYFDK 142
Query: 122 AWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEE- 180
AW + + ++ +L S IM++ + Y F R+ R + V + +FG
Sbjct: 143 AWWIFNVLKS--KVVLNAYSFGIMITGCCE-AGY------FVRVFRLLAV-LEEFGLSPN 192
Query: 181 ---FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFY 235
+ L+ C ++ A+++F K+ R PN T ++L+ GF + G Y
Sbjct: 193 VVIYTTLIDGCCKNGDVMLAKNLFCKM-DRLGLVPNQHTYSVLMNGFFKQGLQREGFQMY 251
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
M G P+ YN I YC G A ++F EM + T LI G
Sbjct: 252 ENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRG 311
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
+ +A +L ++ K L P+I YN +I+ ++ A+ L ++++ + VTY
Sbjct: 312 KKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTY 371
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G K L G L M E T +L+ F D + +
Sbjct: 372 NTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEK 431
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANE 474
G P + +L+ G C G +EA + K + Q + Y M+ Y + ++
Sbjct: 432 SGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYR 491
Query: 475 KLEDLDRMI 483
L L+ M+
Sbjct: 492 ALRLLNEMV 500
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 138/326 (42%), Gaps = 5/326 (1%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ S++++ K E + ++ M R V + +N L+ +C + +A V
Sbjct: 230 TYSVLMNGFFKQGLQREGFQMYENMNRSGIVP----NAYAYNCLISEYCNDGMVDKAFKV 285
Query: 201 FVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
F ++ + A T NIL+ G H++ G P++VTYNI I+G+C
Sbjct: 286 FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCD 345
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G A+RLF +++ P+L T TLI G V N+ A L EM +R +
Sbjct: 346 VGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVT 405
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + R + A E+ ME+ + D TY + G + ++ K + +
Sbjct: 406 YTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNMKEASKPFKSLG 465
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWE 439
E P + ++ +C L L ++ G P+ + + LC +W+
Sbjct: 466 EMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCSTMGLLCRDEKWK 525
Query: 440 EAFECSKQMLVRRRQVSEASYRMLQR 465
EA QM+ + S + Y+M+ +
Sbjct: 526 EAELLLGQMINSGLKPSVSLYKMVHK 551
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 78/310 (25%), Positives = 135/310 (43%), Gaps = 6/310 (1%)
Query: 178 SEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
S FN LL +A +F L S+ N + I++ G E+G +
Sbjct: 124 SNTFNNLLCLLIRSNYFDKAWWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAV 183
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGL 294
+ G P+VV Y IDG CK G A LF +M+R+ +P+ T + L++G GL
Sbjct: 184 LEEFGLSPNVVIYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGL 243
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
R + Q+++ M + + P+ AYN +IS ++ A ++ EM EK I +T
Sbjct: 244 QR---EGFQMYENMNRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMT 300
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y+ + GL + KL ++ + P T +L+ FC ++D + L+ L
Sbjct: 301 YNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLK 360
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
G P + L+ G A + K+M R S+ +Y +L + N +
Sbjct: 361 SSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTD 420
Query: 475 KLEDLDRMIK 484
K ++ +++
Sbjct: 421 KACEMHSLME 430
>gi|357515141|ref|XP_003627859.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355521881|gb|AET02335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 731
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 107/484 (22%), Positives = 200/484 (41%), Gaps = 64/484 (13%)
Query: 59 PQT-TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMR 117
P+T + L+ST + V+ L FFK+ PH+T + + +H+L + R
Sbjct: 33 PKTASTLTSTTIHQVILHLKQHRYEPFFIFHFFKWAQSIPHYTHSLHSSWSMIHMLTKHR 92
Query: 118 YFDQAWELMSHVQR----THPSLLTL------------KSMSIMLSRISKFQSYEETLEA 161
+F A +++ + + + PS+LT +S ++ +K + + ++
Sbjct: 93 HFKTAQQVLDKMAQREILSSPSVLTSLVRIHDDPEVNSHVLSWIVIHYAKSKMTHDAVQV 152
Query: 162 FDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLL 220
F++M + K VL+ + V+ +++ PN N L+
Sbjct: 153 FEQMS----LCNLKPHLHACTVLMNSLLKDGITSMVWKVYKRMVQDGVVPNIYVYNCLIH 208
Query: 221 GFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA--- 277
+S DV E +EM ++G P + TYN I YCKKG +A+ + ++MER
Sbjct: 209 ACSKSRDVERAEFILNEMEVKGVVPDIFTYNTLIALYCKKGLHYEALSVQDKMEREGINL 268
Query: 278 ------------------------------CLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
+P+ T TTLI G +A +L +
Sbjct: 269 DIVSYNSLIYGFCKEGKMREAMRMFGEIKDAIPNHVTYTTLIDGYCKANEFEEALRLREM 328
Query: 308 MPKRNLKPDIGAYNAMISSLI---RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
M + L P + YN+++ L R RD N +L+ EM E+++ D+VT +T+ K
Sbjct: 329 MVAKGLYPGVVTYNSILRKLCSDGRIRDAN---KLLHEMSERKVQADSVTCNTLINAYCK 385
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
L K +M+E P + T L+ FC ++ L ++D GF P+
Sbjct: 386 IGDLNSALKFKTKMLEAGLTPNSFTYKALIHGFCKTSELESAKELLFGMLDAGFSPNYRT 445
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+V C + + + L + ++ + YR L R L + E++E ++++
Sbjct: 446 YSWIVDSYCKKDNTDAVLALPDEFLSKGFCLNISLYRALIRRLCKI---ERIECAEKLLY 502
Query: 485 NLQA 488
+++
Sbjct: 503 HMEG 506
>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
Length = 715
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ +C ++ AR + + AP+ T ++ G + G V +M+
Sbjct: 147 YNTLVAGYCRYGQLDAARRLIASM--PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 204
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +PSVVTY + ++ CK FG AM + +EM C P++ T +I+G +
Sbjct: 205 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 264
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+ + + +PD +Y ++ L + EL EM EK + VT+ +
Sbjct: 265 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 324
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +E ++ ++M T +++ C RVD + G P
Sbjct: 325 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 384
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ GLC RWE+A E K+M+ + +E ++ L Q
Sbjct: 385 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 433
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 88 EFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
+ F+F + +PD ++ L L R ++ A EL+ + R + P+ +T +
Sbjct: 369 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 428
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L + + +E E+ + +N L+ FC Q + A +F
Sbjct: 429 CILCQKGLIEQATMLIEQMSEHGCEVNI-------VTYNALVNGFCVQGRVDSALELFYS 481
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T LL G + + A EM+ + P+VVT+N+ + +C+KG
Sbjct: 482 MPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 539
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ L E+M C P+L T TL+ G N +A +L + + PDI Y+++
Sbjct: 540 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSI 599
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L R + A+++ +++ + V Y+ + L K +G + M+
Sbjct: 600 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 659
Query: 384 VPKTRTVVMLMK 395
+P T + L++
Sbjct: 660 MPNELTYITLIE 671
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 24/392 (6%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PDA+ T I L +A L+ + + PS++T +++L + K + +
Sbjct: 174 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY---TVLLEAVCKSTGFGQA 230
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+E D M R G +NV++ C + + +AR +L S F P+
Sbjct: 231 MEVLDEM--------RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 282
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ +L G + +E + EM+ + P+ VT+++ + +C+ G A+++ E+M
Sbjct: 283 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 342
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C + +I+ + A Q + M PD +Y ++ L R
Sbjct: 343 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 402
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A EL+ EM K + VT++T L + +E L ++M E T L
Sbjct: 403 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 462
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FCV RVD L L+ + + P+ L+TGLC+ R + A E +ML +
Sbjct: 463 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 519
Query: 454 QVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
+ ++ +L + Q +E +E +++M++
Sbjct: 520 APNVVTFNVLVSFFCQKGLMDEAIELVEQMME 551
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 4/302 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C + ++A+ + +++ + P N+ T N + + G + M +M
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTYN ++G+C +G A+ LF M C P+ T TTL+ G +
Sbjct: 449 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 505
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM +++ P++ +N ++S + ++ A+EL+++M E + +TY+T+
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ K E +L ++ P T ++ RV+ + ++ + D G
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 625
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + ++ LC R + A + M+ +E +Y L L + ++ DL
Sbjct: 626 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 685
Query: 480 DR 481
R
Sbjct: 686 LR 687
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 96/235 (40%), Gaps = 3/235 (1%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P V I C++G DA R+ ER + TL+ G +
Sbjct: 103 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 162
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+L MP + PD Y +I L + A+ L+D+M + VTY +
Sbjct: 163 ARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 219
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ KS+G ++ D M P T +++ C RVD L GF P
Sbjct: 220 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 279
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ ++ GLC+ RWE+ E +M+ + +E ++ ML R+ + E+
Sbjct: 280 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 334
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 62/169 (36%), Gaps = 36/169 (21%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMF---- 234
FNVL+ FC + M EA + +++ PN T N LL G K+ A+E+
Sbjct: 526 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 585
Query: 235 ------------------------------YHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+H + G RP V YN + CK+
Sbjct: 586 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 645
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
A+ F M C+P+ T TLI G + + R L E+ R +
Sbjct: 646 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 694
>gi|410109877|gb|AFV61018.1| pentatricopeptide repeat-containing protein 11, partial [Aloysia
lycioides]
Length = 397
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 148/353 (41%), Gaps = 44/353 (12%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A E ++ T +H + P D K L L +++YF W
Sbjct: 74 AXECYRLTREHKFWVPF-DTCRKVLEHLMKLKYFKLVWGF-------------------- 112
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE LE ++ FN+L+ FC + ++ A+SVF +
Sbjct: 113 ---------YEEILEC--GYPASLYF---------FNILMHRFCKEGDIMVAQSVF-NAI 151
Query: 206 SRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+++ P+ + N L+ G+ GD+ + M G +P V TY++ I+G CK+
Sbjct: 152 TKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKM 211
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA +F+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +
Sbjct: 212 DDANEMFDEMLDKGLVPNGVTFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTL 271
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + DL A +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 272 IYGLCKKGDLKQAHDLIDEMSMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXI 331
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 332 RLDDVAYTALISGLCQEERYLDAEKVLREMLSVGLKPDTGTYTMIINEFCKKG 384
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/262 (24%), Positives = 127/262 (48%), Gaps = 4/262 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK+G A +F + + PS+ + TL++G
Sbjct: 112 FYEEILECGYPASLYFFNILMHRFCKEGDIMVAQSVFNAITKWGLRPSVVSFNTLMNGYI 171
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L + M ++PD+ Y+ +I+ L + ++ A E+ DEM +K + + V
Sbjct: 172 RLGDMDEGFRLKNAMHASGVQPDVYTYSVLINGLCKESKMDDANEMFDEMLDKGLVPNGV 231
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 232 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEM 291
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 292 SMKGLKPDKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVAYTALISGLCQ---E 348
Query: 474 EKLEDLDRMIKNLQAV-LPPPT 494
E+ D +++++ + +V L P T
Sbjct: 349 ERYLDAEKVLREMLSVGLKPDT 370
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 119/283 (42%), Gaps = 23/283 (8%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS--H 128
N+L F + + A F + P+ +F ++ R+ D+ + L + H
Sbjct: 129 NILMHRFCKEGDIMVAQSVFN-AITKWGLRPSVVSFNTLMNGYIRLGDMDEGFRLKNAMH 187
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFV--GIRKFGSEEFNVLLQ 186
P + T S++++ + K ++ E FD M + V G+ F L+
Sbjct: 188 ASGVQPDVYTY---SVLINGLCKESKMDDANEMFDEMLDKGLVPNGVT------FTTLID 238
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
C + A ++ ++LS+ P+ T N L+ G + GD+ EM ++G +P
Sbjct: 239 GHCKNGRVDLAMEIYKQMLSQSLXPDLITYNTLIYGLCKKGDLKQAHDLIDEMSMKGLKP 298
Query: 246 SVVTYNIRIDGYCKKG----CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
+TY IDG CK+G F R+ +E R+ + T LI G A
Sbjct: 299 DKITYTTLIDGCCKEGDLETAFEHRKRMIQEXIRLDDVA----YTALISGLCQEERYLDA 354
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
++ EM LKPD G Y +I+ + D+ +L+ EM+
Sbjct: 355 EKVLREMLSVGLKPDTGTYTMIINEFCKKGDVWTGSKLLKEMQ 397
>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
Length = 424
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 135/328 (41%), Gaps = 5/328 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + + + YE + F ME F GI K+ ++L+ FC + SVF K
Sbjct: 46 LLSSVVRMKKYETVVSLFKEME---FRGI-KYNVCTLSILINCFCFLHHVDYGFSVFGKT 101
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L R F P+ L+ G G EM L G P VVT N + GYC +G
Sbjct: 102 LKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKI 161
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
++F M P + + + I+G V I +A +LFDEM R + P+ YN +
Sbjct: 162 DKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTL 221
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I +L + A L +M + D + Y T+ G K L+ + L+ M
Sbjct: 222 IKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLV 281
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
P +++ C + +V + LI G P H LV GLC G EA
Sbjct: 282 KPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALR 341
Query: 444 CSKQMLVRRRQVSEASYRMLQRYLVQAN 471
++M SY +L + +Q N
Sbjct: 342 LFRKMEEDGCMPGSCSYNVLLQGCLQHN 369
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 103/219 (47%), Gaps = 1/219 (0%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+++ + +C +++ EA +F ++ R PN T N L+ ++ ++ + +M
Sbjct: 182 SYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM 241
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
G P ++ Y+ +DG+CK+G + + LF+EM+R P L T +I+G R +
Sbjct: 242 CACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKV 301
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A+++ + LKPD+ Y A++ L R + A+ L +MEE + +Y+ +
Sbjct: 302 KDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVL 361
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
G ++ + V +L M + F T L F
Sbjct: 362 LQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFLKDFL 400
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/243 (20%), Positives = 104/243 (42%), Gaps = 1/243 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
++ M+ R +P ++ +N + + + + LF+EME ++ T++ LI+
Sbjct: 28 FNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCF 87
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ ++ +F + KR KPD+ + +I + R A L+ EM D VT
Sbjct: 88 LHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVT 147
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
+++ G ++ V K++ M+ P + + + +C ++D + L+ +
Sbjct: 148 CNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMS 207
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANAN 473
RG P+ + L+ LC R +A ++M +Y +L + Q N +
Sbjct: 208 HRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLD 267
Query: 474 EKL 476
E L
Sbjct: 268 EML 270
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/215 (20%), Positives = 86/215 (40%), Gaps = 3/215 (1%)
Query: 259 KKGCFG---DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKP 315
+KG FG DA+ F M P + L+ ++ LF EM R +K
Sbjct: 14 RKGYFGNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKY 73
Query: 316 DIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLY 375
++ + +I+ ++ + + ++ D V + T+ G+ + E L
Sbjct: 74 NVCTLSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLL 133
Query: 376 DRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSR 435
M VP T LM+ +C ++D ++ ++ +G P ++ + + G C
Sbjct: 134 KEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV 193
Query: 436 GRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQA 470
+ +EA E +M R + +Y L + L QA
Sbjct: 194 EKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQA 228
>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
Length = 698
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 1/270 (0%)
Query: 195 KEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ AR ++ ++L R ++ + +++ G G V G P V YN+
Sbjct: 63 ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
IDGYC++G G + L EME +P++ T +IH G ++ + L EM R L
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
P++ YN +I++L +CR + A +++++M + R D VT++TM G + + K
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALK 242
Query: 374 LYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
L I P + L+ FCV + +L ++ RG P L L+ GL
Sbjct: 243 LLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLV 302
Query: 434 SRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G+ +A ++M R+ Y +L
Sbjct: 303 VSGQVNDALIVREKMAERQVMPDANIYNVL 332
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 134/300 (44%), Gaps = 2/300 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ A C + +A + +++ SRF P+ T N ++ GF GDV E +
Sbjct: 189 YNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAI 248
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P+ ++Y I G+C +G A L EM P + T+ LIHG + ++
Sbjct: 249 RRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVN 308
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A + ++M +R + PD YN +IS L + R L+AA L++EM E+++ D Y T+
Sbjct: 309 DALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLI 368
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G ++S L K+++ M E K P +++K +C + + + G
Sbjct: 369 DGFVRSDKLSDARKIFEFM-EEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCI 427
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P LV G +G + M+ RR + + +Y L EDL
Sbjct: 428 PDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDL 487
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 123/269 (45%), Gaps = 2/269 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ ++ + ++ + S+ ++ +R +PN + N ++ + + ++MV
Sbjct: 154 YGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMV 213
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
F P VVT+N I G+C++G +A++L E R P+ + T LIHG +
Sbjct: 214 KSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAM 273
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L EM R PD+ A+I L+ +N A+ + ++M E+++ D Y+ +
Sbjct: 274 VASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLI 333
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L L + M+E K P L+ F + ++ ++ ++ ++ C
Sbjct: 334 SGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA-C 392
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQM 448
P A ++++ G C G +EA C M
Sbjct: 393 PDIVAYNVMIKGYCKFGMMKEAVTCMSSM 421
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/286 (24%), Positives = 124/286 (43%), Gaps = 21/286 (7%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NVL+ C ++ + A+++ ++L + P+ L+ GF S ++ + M
Sbjct: 329 YNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFME 388
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ P +V YN+ I GYCK G +A+ M + C+P T TTL+ G +I
Sbjct: 389 EKAC-PDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDIS 447
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ +L +M KR KP+I Y ++I D +A +L +M+ + + NV ++T+
Sbjct: 448 ASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGL-FPNVVHYTVL 506
Query: 360 FG-LMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG------------ 406
G L K + ++ M+ P TV L+ VN R +
Sbjct: 507 IGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGL-VNCRHGMVNSNRSDTKQAHE 565
Query: 407 ----LNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
L+++ LI G P A + ++ LC +A + +M
Sbjct: 566 KSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKM 611
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 107/250 (42%), Gaps = 29/250 (11%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS--EEFN--VLLQAFCTQKEMKE 196
+ ++M+ KF +E + M RK G +EF L+ + + ++
Sbjct: 397 AYNVMIKGYCKFGMMKEAVTCMSSM--------RKAGCIPDEFTYTTLVDGYAKKGDISA 448
Query: 197 ARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRID 255
+ + ++ R PN T L+ G+ GD + E + +M G P+VV Y + I
Sbjct: 449 SLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIG 508
Query: 256 GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA-----GLV-------RNIHQARQ 303
KK A FE M C P+ T+ L++G G+V + H+
Sbjct: 509 SLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSA 568
Query: 304 LFD---EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
L D + L P I AYNA+I SL R L AM+L D+M K D +T+ ++ +
Sbjct: 569 LLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLY 628
Query: 361 GLMKSSGLEG 370
G S+G G
Sbjct: 629 GF-SSAGESG 637
>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
Length = 514
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 113/237 (47%), Gaps = 8/237 (3%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P ++T ++ L K + E + F + + ++ + N+++ C +
Sbjct: 264 PDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL-------DTATCNIIINGMCKGNK 316
Query: 194 MKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNI 252
+ EA +F L ++ + T NIL+ F + G+ E Y EM+ +G PS VTYN
Sbjct: 317 VDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNS 376
Query: 253 RIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRN 312
+DG+CK+ +A ++ + M C P + T +TLI G + +LF EM +R
Sbjct: 377 MVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRG 436
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
L D YNA+I + DLN A ++ +EM + D +T+ +M GL + L+
Sbjct: 437 LVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQ 493
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/369 (23%), Positives = 152/369 (41%), Gaps = 53/369 (14%)
Query: 143 SIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVF 201
S ++ R+ K ++ + F M E+ IF + + N ++ +C+ + +A +
Sbjct: 84 SAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTY-----NCMIDGYCSYGKWSDAEQLL 138
Query: 202 VKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKK 260
++ R P+ T + L+ F + G V+ E Y EM+ R P+ +TY+ IDG+CK
Sbjct: 139 RDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKH 198
Query: 261 GCFGDAMRLFEEMERVACLPSLQTITTLI-----------HGAGLVRNIHQARQLFDEMP 309
DA +F+ M C P + T+ TLI HG V N++ A+ LF EM
Sbjct: 199 SRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMI 258
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS--- 366
+ PDI N +++ L L A+E+ ++ ++ D T + + G+ K +
Sbjct: 259 SNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVD 318
Query: 367 ------------GLEGVCKLYDRMI-----EGKF---------------VPKTRTVVMLM 394
G+E Y+ +I EG F +P T T ++
Sbjct: 319 EAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMV 378
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
FC R++ + ++ G P L+ G C GR ++ E +M R
Sbjct: 379 DGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLV 438
Query: 455 VSEASYRML 463
+Y L
Sbjct: 439 ADTITYNAL 447
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 90/384 (23%), Positives = 166/384 (43%), Gaps = 24/384 (6%)
Query: 117 RYFDQAWELMSHVQRT-HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRK 175
++ D L ++R P ++T ++ + K EE + + R IF
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYR--EMLRRNIFPTTIT 187
Query: 176 FGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-----------FK 223
+ S ++ FC +++A+ +F ++S+ +P+ T+N L+ G F
Sbjct: 188 YSS-----MIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFC 242
Query: 224 ESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQ 283
+ G+V + + EM+ G P +VT N + G C+ G A+ +F+ ++
Sbjct: 243 QVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTA 302
Query: 284 TITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
T +I+G + +A LF+ +P ++ D+ YN +I ++ + A ++ EM
Sbjct: 303 TCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEM 362
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
K I VTY++M G K + LE ++ D M+ P T L+K +C RV
Sbjct: 363 LCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRV 422
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-M 462
D GL L+ + RG + L+ G C G A + ++M+ ++R M
Sbjct: 423 DDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSM 482
Query: 463 LQRYLVQANANEK---LEDLDRMI 483
L +A + LEDL + +
Sbjct: 483 LAGLCTKAELQKGLTMLEDLQKSV 506
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 140/312 (44%), Gaps = 14/312 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGD-VTAMEMFYHEM 238
F L+ C + + +A ++ +++ P+ T ++ G + GD V+A+ M +M
Sbjct: 13 FTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNML-RKM 71
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ +VV Y+ +D CK G A +F EM P++ T +I G
Sbjct: 72 DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A QL +M +RN+ PD+ ++A+I++ ++ ++ A EL EM + I +TY +M
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK-----------FFCVNFRVDLGL 407
G K S LE ++D M+ P T+ L+ FC V++
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251
Query: 408 NLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYL 467
+L+ +I G P + L+ GLC G+ E+A E K + + A+ ++ +
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311
Query: 468 VQANANEKLEDL 479
+ N ++ DL
Sbjct: 312 CKGNKVDEAWDL 323
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 116/268 (43%), Gaps = 12/268 (4%)
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
K+ + A +F EM +G P+V+TYN IDGYC G + DA +L +M P +
Sbjct: 92 KDGNHIKAQNIFT-EMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDV 150
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T + LI+ + A +L+ EM +RN+ P Y++MI + L A + D
Sbjct: 151 VTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDL 210
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSG--LEGVCK---------LYDRMIEGKFVPKTRTVV 391
M K D +T +T+ G ++ + G C+ L+ MI P T
Sbjct: 211 MVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCN 270
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ C N +++ L ++ ++++ G+C + +EA++ + V
Sbjct: 271 TLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVN 330
Query: 452 RRQVSEASYRMLQRYLVQANANEKLEDL 479
+ +Y +L V+ + ED+
Sbjct: 331 GVETDVVTYNILIGVFVKEGNFLRAEDI 358
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/234 (23%), Positives = 112/234 (47%), Gaps = 7/234 (2%)
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
++A E+ Q++ L T + +I+++ + K +E + F+ + V +
Sbjct: 282 LEKALEMFKVFQKSKMDLDT-ATCNIIINGMCKGNKVDEAWDLFNSLP----VNGVETDV 336
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHE 237
+N+L+ F + A +++++L + P+ T N ++ GF + +
Sbjct: 337 VTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDS 396
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G P VVT++ I GYCK G D + LF EM + + T LIHG V +
Sbjct: 397 MVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGD 456
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
++ A+ +F+EM + PD + +M++ L +L + +++++ +K + H+
Sbjct: 457 LNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDL-QKSVDHE 509
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 88/206 (42%), Gaps = 4/206 (1%)
Query: 238 MVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN 297
MV G +VVT+ ++G C++G A+ L + M P T T+++G + +
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN--AAMELMDEMEEKRIGHDNVTY 355
A + +M + +K ++ Y+A++ L C+D N A + EM EK I + +TY
Sbjct: 61 TVSALNMLRKMDESQIKANVVIYSAIVDRL--CKDGNHIKAQNIFTEMHEKGIFPNVLTY 118
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+ M G +L MIE P T L+ F +V L+ ++
Sbjct: 119 NCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLR 178
Query: 416 RGFCPHGHALDLLVTGLCSRGRWEEA 441
R P ++ G C R E+A
Sbjct: 179 RNIFPTTITYSSMIDGFCKHSRLEDA 204
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/209 (20%), Positives = 86/209 (41%), Gaps = 35/209 (16%)
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M C ++ T TTL++G + QA L D M + +PD Y +++ + + D
Sbjct: 1 MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+A+ ++ +M+E +I + V Y S+ ++ +CK +G +
Sbjct: 61 TVSALNMLRKMDESQIKANVVIY---------SAIVDRLCK------DGNHIKAQ----- 100
Query: 393 LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRR 452
N++ + ++G P+ + ++ G CS G+W +A + + M+ R
Sbjct: 101 ---------------NIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERN 145
Query: 453 RQVSEASYRMLQRYLVQANANEKLEDLDR 481
++ L V+ E+L R
Sbjct: 146 IDPDVVTFSALINAFVKEGKVSGAEELYR 174
>gi|116789117|gb|ABK25122.1| unknown [Picea sitchensis]
Length = 572
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/406 (23%), Positives = 177/406 (43%), Gaps = 15/406 (3%)
Query: 65 SSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWE 124
S LV+ +L RL +G A F++ P ++ T + + IL R FD+ W
Sbjct: 138 SPNLVQKLLRRL---QYDGKAAFRVFQWAGSQPDYSHTVSVYHTMISILGVHRKFDKGWG 194
Query: 125 LMSHVQRTHP-SLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
L +++ H +++ +++ IM+ R + + ++ F M++ S++F
Sbjct: 195 L---IRKMHERAMVNRQTLMIMIKRYAAAHDARKAIKTFHAMDKFKLAA----DSDDFLC 247
Query: 184 LLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKES-GDVTAMEMFYHEMVLRG 242
LL A C ++EA + + K+ N++L G+ DV ++ + EM
Sbjct: 248 LLCALCRNMFVEEAEELIHFNKKCYPLETKSFNVILYGWCNIFVDVYQVKRLWEEMSNLC 307
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
P +Y I + K G F D +RL++EM++ P+L+ +I+ R + +A
Sbjct: 308 ITPDAFSYTTVICCFSKAGKFYDVVRLYDEMKKKGFTPNLKVYNAVIYVLSKERCVKEAL 367
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
LF+++ + P+ Y +I L R A +D+M + YH FF
Sbjct: 368 NLFNKIREMGFHPNAVTYTYLIYLLCRTWKPEEAYSYLDKMIMEGFVPTIDIYHA-FFRF 426
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+++ G +CKL+D+M E P T +M ++ C + LW + F
Sbjct: 427 VENEG--AICKLFDKMFENGCAPTMETYIMSIRRCCSWSDYENAFKLWNDMEKHWFSADS 484
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
LL+ G G+ EEA +C ++M V + +M + + V
Sbjct: 485 SIHYLLLNGFLLNGKPEEACKCYREMKVNGFSLEPKIDKMFESWNV 530
>gi|326499175|dbj|BAK06078.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 153/323 (47%), Gaps = 8/323 (2%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L LF H A+ F+ +Q ++P +F + + ++ +A EL+ +
Sbjct: 202 NKLMDLFIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMD 261
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
S T+ + +I+++ + + + + E R++R+ G+ + ++ +C
Sbjct: 262 EFGCSPDTV-THNILVNGLCRAKEVSKGREVLRRLQRD---GVCMPNVVTYTSVISGYCK 317
Query: 191 QKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
M++A +V+ +++ +PN T N+L+ G+ ++G++ + Y +M+LR P VVT
Sbjct: 318 AGRMEDAMAVYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVT 377
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
++ IDGYC+ G DAM+++ EM + P+ T +IH +A +M
Sbjct: 378 FSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMN 437
Query: 310 KR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFG-LMKSSG 367
R ++ P YN +I L + ++ A ++ EMEEK D TY + G MK
Sbjct: 438 MRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRI 497
Query: 368 LEGVCKLYDRMIEGKFVPKTRTV 390
E V + +M+E P + V
Sbjct: 498 AEAV-TFFHKMVETGCSPDSIVV 519
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 152 FQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--A 209
F + +A E I G+ FNV+++ C ++++A V+ + F +
Sbjct: 208 FIGHGRVQDAVALFEGWIQGGVYSPDVWSFNVVIKGVCKVGDVQKALE-LVERMDEFGCS 266
Query: 210 PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF-RPSVVTYNIRIDGYCKKGCFGDAMR 268
P+ T NIL+ G + +V+ + G P+VVTY I GYCK G DAM
Sbjct: 267 PDTVTHNILVNGLCRAKEVSKGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMA 326
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
++ +M V P++ T LI+G G N+ A ++ +M R PD+ ++++I
Sbjct: 327 VYNDMVAVGTSPNVVTYNVLINGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYC 386
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM-IEGKFVPKT 387
RC L+ AM++ EM + I + T+ + K + +M + P+
Sbjct: 387 RCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQA 446
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++ C +VD + + ++G P + +L+ G C +GR EA
Sbjct: 447 FIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRIAEA 500
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/340 (21%), Positives = 145/340 (42%), Gaps = 20/340 (5%)
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
H Q P + S ++S + + + + L+ FD+M + F + F L
Sbjct: 118 HSQLAMPP--SAHSYRYVISLMCQSGRHTDALQLFDQMTDQS----GYFPNARFLSFLSG 171
Query: 188 FCTQKEMKEARSVFVKLLSRFAPN------NKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
C + +A + + S+F + NK M+ L +G D A+ E ++
Sbjct: 172 SCAAAGLLDAAAALLSKASQFGCSIEAYAYNKLMD-LFIGHGRVQDAVAL----FEGWIQ 226
Query: 242 G--FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G + P V ++N+ I G CK G A+ L E M+ C P T L++G + +
Sbjct: 227 GGVYSPDVWSFNVVIKGVCKVGDVQKALELVERMDEFGCSPDTVTHNILVNGLCRAKEVS 286
Query: 300 QARQLFDEMPKRNL-KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+ R++ + + + P++ Y ++IS + + AM + ++M + VTY+ +
Sbjct: 287 KGREVLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDAMAVYNDMVAVGTSPNVVTYNVL 346
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G K+ + +Y +MI + +P T L+ +C ++D + +W +
Sbjct: 347 INGYGKAGNMGSAVAVYQQMILRRCLPDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHI 406
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
P+ H +++ C + R EA K+M +R +A
Sbjct: 407 QPNAHTFCIIIHTFCKQNRSGEALHFLKKMNMRTDIAPQA 446
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 65/151 (43%), Gaps = 2/151 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F+ L+ +C ++ +A ++ ++ PN T I++ F + F +M
Sbjct: 378 FSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTFCIIIHTFCKQNRSGEALHFLKKMN 437
Query: 240 LR-GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+R P YN ID CK G +A + EME C P T T LI G + I
Sbjct: 438 MRTDIAPQAFIYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTILIIGHCMKGRI 497
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
+A F +M + PD N+ IS L++
Sbjct: 498 AEAVTFFHKMVETGCSPDSIVVNSFISCLLK 528
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 66/168 (39%), Gaps = 11/168 (6%)
Query: 103 PDA--FEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEET 158
PD F + R D A ++ + + + H P+ T I++ K E
Sbjct: 373 PDVVTFSSLIDGYCRCGQLDDAMKIWTEMAQYHIQPNAHTF---CIIIHTFCKQNRSGEA 429
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
L +M + + F +N ++ C ++ EA + +++ + P+ T I
Sbjct: 430 LHFLKKMNMRTDIAPQAF---IYNPVIDVLCKGGKVDEANMILIEMEEKGCRPDKYTYTI 486
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGD 265
L++G G + F+H+MV G P + N I K G G+
Sbjct: 487 LIIGHCMKGRIAEAVTFFHKMVETGCSPDSIVVNSFISCLLKSGMPGE 534
>gi|115466100|ref|NP_001056649.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|6983867|dbj|BAA90802.1| salt-inducible protein-like [Oryza sativa Japonica Group]
gi|113594689|dbj|BAF18563.1| Os06g0125300 [Oryza sativa Japonica Group]
gi|125553869|gb|EAY99474.1| hypothetical protein OsI_21443 [Oryza sativa Indica Group]
gi|125595884|gb|EAZ35664.1| hypothetical protein OsJ_19951 [Oryza sativa Japonica Group]
Length = 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/309 (24%), Positives = 134/309 (43%), Gaps = 6/309 (1%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
N+LL+ ++ A V ++ P+ T +L + GD+ + + +++
Sbjct: 197 NILLKGLVGIGDLDAALKVLDEMPGLGITPDVVTYTTVLSAYCGKGDIEGAQKLFDDIIA 256
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
G RP V Y + IDGYC+ G DA R+ +EME P+ T + +I +
Sbjct: 257 SGRRPDVTMYTVLIDGYCQCGNLQDAARIMDEMEAARVQPNEVTYSVVIEACCKEEKPIE 316
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR EM PD ++ L + A +L ME+K + DN+ T+ +
Sbjct: 317 ARDFMREMLGAGYVPDTALGAKVVDVLCQDGKSEEAYQLWRWMEKKNVPPDNMVTSTLIY 376
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
L K+ + L+D + G F P T L+ C N + +W +++RG+ P
Sbjct: 377 WLCKNGMVREARNLFDELERG-FKPSLLTYNSLISGLCENEELQEAGRVWDDMVERGYEP 435
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLD 480
+ + L+ GLC G+ E ++M+ R + S +L + LV + + + ED
Sbjct: 436 NAMTYEALIKGLCKTGKPNEGATVFEEMVSRGCKPSS----LLFQVLVDSLSEPRHEDTI 491
Query: 481 RMIKNLQAV 489
R I A+
Sbjct: 492 RKILETAAL 500
>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
Length = 913
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 165/398 (41%), Gaps = 5/398 (1%)
Query: 54 LLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHIL 113
L +P+ N+L F + L A E ++ L+ P P ++ ++ L
Sbjct: 181 LFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGL 240
Query: 114 ARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
+ FD+++E+ H + + L + S ++ + L+ R+ +E+
Sbjct: 241 CKCGKFDESFEIW-HRMKKNERGQDLYTYSTLIHGLCG----SGNLDGATRVYKEMAENG 295
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEM 233
+N +L + ++E ++ + + NIL+ G E+ V
Sbjct: 296 VSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAIS 355
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ + + +TY + + G CK G A+ + EE E +++I+G
Sbjct: 356 IWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLC 415
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ + + D+M K KP+ NA+I+ +R L A+ M K V
Sbjct: 416 REGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVV 475
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+T+ GL K+ L M++ + P T +LM C ++D+ LNLW
Sbjct: 476 TYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQA 535
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+++GF P ++++ GLCS G+ E+A + +M R
Sbjct: 536 LEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQR 573
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/430 (21%), Positives = 180/430 (41%), Gaps = 49/430 (11%)
Query: 81 SNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLT 138
SN E F + +P + + I R + FD+A EL++ + Q P +
Sbjct: 102 SNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVF- 160
Query: 139 LKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
S +++ ++K + L+ FD M ER + + + N+L+ F + ++ A
Sbjct: 161 --SYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACY-----NILIDGFFKKGDILNA 213
Query: 198 RSVFVKLLS--RFAPNNKTMNILLLG------FKES------------------------ 225
++ +LL PN + N+++ G F ES
Sbjct: 214 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 273
Query: 226 -----GDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
G++ Y EM G P VV YN ++GY + G + + L++ ME+ C
Sbjct: 274 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGC-R 332
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
++ + LI G + +A +++ +P+++ D Y ++ L + LN A+ ++
Sbjct: 333 TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 392
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+E E R D Y +M GL + L+ V + D+M + P ++ F
Sbjct: 393 EEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRA 452
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+++ L +G ++ +G P + L+ GL R+ EA+ K+ML + + + +Y
Sbjct: 453 SKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITY 512
Query: 461 RMLQRYLVQA 470
+L L Q
Sbjct: 513 SLLMNGLCQG 522
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 122/264 (46%), Gaps = 2/264 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C + + E V ++ PN N ++ GF + + F+ MV
Sbjct: 407 YSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMV 466
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G P+VVTYN I+G K F +A L +EM + P++ T + L++G + +
Sbjct: 467 SKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLD 526
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L+ + ++ KPD+ +N +I L + A++L EM+++ + VT++T+
Sbjct: 527 MALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLM 586
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G K E K++D +++ P + + +K C R+ + +DRG
Sbjct: 587 EGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVL 646
Query: 420 PHGHALDLLVTG-LCSRGRWEEAF 442
P ++LV G L +G E F
Sbjct: 647 PTAITWNILVQGYLALKGYMEPVF 670
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 92/414 (22%), Positives = 153/414 (36%), Gaps = 82/414 (19%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ +++F Y T F + + +F + ++ A+ +A +F ++
Sbjct: 29 IFDSVTRFPGYSHTPYVFHHILKRLF---------DPKLVAHAYAKNSMPDQALDIFQRM 79
Query: 205 LSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGC 262
F P ++ N LL ES E F+ G P++ TYNI I C+K
Sbjct: 80 HEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQ 139
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG---- 318
F A L M P + + TLI+ + A +LFDEMP+R + PD+
Sbjct: 140 FDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNI 199
Query: 319 --------------------------------AYNAMISSLIRCRDLNAAMELMDEMEEK 346
+YN MI+ L +C + + E+ M++
Sbjct: 200 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT------------------- 387
G D TY T+ GL S L+G ++Y M E P
Sbjct: 260 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 319
Query: 388 ------------RTVV---MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
RTVV +L++ N +VD +++W L ++ C +LV GL
Sbjct: 320 LELWKVMEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGL 379
Query: 433 CSRGRWEEAFECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
C G +A ++ R + +Y M+ + +E LD+M K+
Sbjct: 380 CKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKH 433
>gi|224140601|ref|XP_002323670.1| predicted protein [Populus trichocarpa]
gi|222868300|gb|EEF05431.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 158/336 (47%), Gaps = 15/336 (4%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNIL 218
E D + R + I F +FN +L A T E ++ L PN+ T +I+
Sbjct: 123 ERVDYIVRVLDKEIGFFNISDFNDVLMALVTANESDLVLKLYSGLSCYSLEPNSWTFSIM 182
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ + D + +M+ +GF P+V T I I+ +CK G + ++FE M+R+ C
Sbjct: 183 VRCHCKKKDPGEAKRVLDQMMQKGFNPNVATLTILINSFCKMGQLQNTFQVFEVMDRIGC 242
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
P++QT L+ G V I +A +L +++ K ++PDI Y AM+ + + AME
Sbjct: 243 KPNIQTYNCLLKGMCYVGRIDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAME 302
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSS----GLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
L++E E + + VT++T+ G K G GV KL M + K +P + L+
Sbjct: 303 LLNEAMEMGLAPNVVTFNTLLDGYAKEGRPLKGF-GVLKL---MKQRKCMPDYISYSTLL 358
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE-----AFECSKQML 449
+ +V GL ++ + G ++ LV GLC + E A+E ++M
Sbjct: 359 HGLLLWGKVLAGLRIFNEMEGSGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMK 418
Query: 450 VRRRQVSEASYRM-LQRYLVQANANEKLEDLDRMIK 484
R + +++Y + +Q V ++ +L +M++
Sbjct: 419 KRGFVIEQSTYALVIQALWVAKKVDDAFINLHQMVR 454
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/326 (23%), Positives = 151/326 (46%), Gaps = 15/326 (4%)
Query: 133 HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQK 192
+P++ TL +I+++ K + T + F+ M+R +G + + +N LL+ C
Sbjct: 208 NPNVATL---TILINSFCKMGQLQNTFQVFEVMDR---IGCKP-NIQTYNCLLKGMCYVG 260
Query: 193 EMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESG-DVTAMEMFYHEMVLRGFRPSVVTY 250
+ EA + + + P+ T ++ GF + G AME+ M + G P+VVT+
Sbjct: 261 RIDEAFELMEDIKKTTVEPDIYTYTAMMDGFCKVGRSDEAMELLNEAMEM-GLAPNVVTF 319
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPK 310
N +DGY K+G + + M++ C+P + +TL+HG L + ++F+EM
Sbjct: 320 NTLLDGYAKEGRPLKGFGVLKLMKQRKCMPDYISYSTLLHGLLLWGKVLAGLRIFNEMEG 379
Query: 311 RNLKPDIGAYNAMISSL----IRCRDL-NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKS 365
L+ D N+++ L I+ DL A E+ ++M+++ + TY + L +
Sbjct: 380 SGLEADERLMNSLVRGLCRKSIKENDLVEVAYEVFEKMKKRGFVIEQSTYALVIQALWVA 439
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
++ +M+ ++P+ T+ +++ CV +VD + + + P +
Sbjct: 440 KKVDDAFINLHQMVRLGYIPRLITINNVIQALCVGGKVDKAFYVLVLMYENSKIPSRMSY 499
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVR 451
DLL+ L + R A LVR
Sbjct: 500 DLLIHELNRQERTLGACNVYGAALVR 525
>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g16880-like, partial [Glycine max]
Length = 594
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 155/359 (43%), Gaps = 44/359 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ + E + ++ SR PN T NI++ F + G + +M
Sbjct: 175 YNTLIDGCFKWRGSTEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKM 234
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
V G P TYN I+G+CK G G+A R+ +EM R P + T+ T++H + +
Sbjct: 235 VESGVSPDCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKP 294
Query: 299 HQARQ-----------------------------------LFDEMPKRNLKPDIGAYNAM 323
+A + L++EM KR + P + +YN +
Sbjct: 295 EEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPL 354
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L + A++ ++E+ EK + D V+ + + G ++ + +++M+ F
Sbjct: 355 IRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSF 414
Query: 384 VPKTRTVVMLMKFFCVNFRVDL---GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEE 440
P T +L++ C RVD+ L+ I + + +++ LC GR +E
Sbjct: 415 KPDIFTRNILLRGLC---RVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDE 471
Query: 441 AFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLED-LDRMIKNLQAVLPPPTRQQV 498
AF+ M V++ + + +Y + R L A E+ E + ++ + QAV T Q++
Sbjct: 472 AFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQEL 530
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/272 (24%), Positives = 112/272 (41%), Gaps = 36/272 (13%)
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N L+ G + G + EM P VVTYN IDG K + RL EEM
Sbjct: 139 TYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLLEEM 198
Query: 274 ERVACL------------------------------------PSLQTITTLIHGAGLVRN 297
+ + P T T+I+G
Sbjct: 199 KSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCKAGK 258
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
+ +A ++ DEM ++ LKPDI N M+ +L + A EL + ++ D VTY T
Sbjct: 259 LGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGT 318
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ G K + KL++ M + VP + L++ C++ + D ++ L+++G
Sbjct: 319 LIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKG 378
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
P + ++++ G C G ++AF+ +M+
Sbjct: 379 LVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMV 410
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 122/277 (44%), Gaps = 15/277 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
N +L C +K+ +EA + VK R + + T L++G FK + A+++ + EM
Sbjct: 281 LNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVTYGTLIMGYFKGKQEDKALKL-WEEM 339
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
RG PSVV+YN I G C G A+ E+ +P + +IHG +
Sbjct: 340 KKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELLEKGLVPDEVSCNIIIHGYCWEGMV 399
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A Q ++M + KPDI N ++ L R L A +L + K+ D VTY+TM
Sbjct: 400 DKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTM 459
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
L K L+ L M KF P T +++ R + L + G
Sbjct: 460 ISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQ 519
Query: 419 CPHGH--------ALDLL----VTGLCSRGRWEEAFE 443
H + D++ ++ LC++G+++EA +
Sbjct: 520 AVKTHDTSQELDASSDIMYSQQISDLCTQGKYKEAMK 556
>gi|326525315|dbj|BAK07927.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 439
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 93/397 (23%), Positives = 183/397 (46%), Gaps = 18/397 (4%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQ--HPHFTPTPDAFEKTLHILARMRYF 119
TPL + V+ L L+ ++ +AL+FF ++ + PTP + + IL + F
Sbjct: 25 TPLDAAAVQETLS-LYT--NDWRRALDFFHWSASPGGGNLRPTPSTLSRAVDILGKHFEF 81
Query: 120 DQAWELM-SHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
QA L+ +H T P+ L ++ +L+R++ ++ + AF+ VG+R S
Sbjct: 82 PQATSLLLAHHDPTDPAFLR-PALRALLNRLAAANLVDDAVRAFESTAAS--VGLRDEAS 138
Query: 179 EEFNVLLQAFCTQKEMKEARSVFV----KLLSRFAPNNKTMNILLLGFKESGDVTAMEMF 234
F++L+ A C + + EA + + F P KT N+LL G+ ++ +
Sbjct: 139 --FHLLIDALCDHRRVDEAHHLCLGGRAAAPPPFPPGTKTHNLLLRGWAKARAWARLRQH 196
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
+ +M RG + +Y+I +D K G A++LF+EM++ + IH GL
Sbjct: 197 WLDMDARGVAKDLHSYSIYMDALAKSGKPWKAVKLFKEMKQKRLPVDIVAYNIAIHAVGL 256
Query: 295 VRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVT 354
+ A +++ +M + +P+ +N ++ L + + +M + + +T
Sbjct: 257 AEGVDFAVRMYRQMIEAGCRPNTATFNTIVKLLCKEGRFKEGYAFVQQMHKAGCEPNELT 316
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
YH F L + + V L+++M++ P+ T VML+K F + +W +
Sbjct: 317 YHCFFQYLSRP---QEVLALFEKMLQRGCRPRMDTYVMLIKRFGRWGFLRPVFFVWKTME 373
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
++G P A + L+ L +G + A + ++ML +
Sbjct: 374 EQGLTPDAFAYNTLIDALLEKGMVDLARKYDEEMLAK 410
>gi|255660800|gb|ACU25569.1| pentatricopeptide repeat-containing protein [Verbena rigida]
Length = 418
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 17/341 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS-HVQRTHPSLLTLKSMSI 144
A+E ++ T +H P D K L L +++YF W +++ +P+ +L +I
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGFYEENLECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 142 LMHSFVK--------EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + + EM+ +G P+ VT+ IDG+CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + P L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I D+V Y + GL + K+ M+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P+ T M++ FC V G L + G+ P
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKP 414
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q +
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + ++K+A+ + +++ + P+ T L+ G + GD+ + M+
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMI 338
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R V Y I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 339 KENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVW 398
Query: 300 QARQLFDEMPKRNLKPDI 317
+L EM + KP +
Sbjct: 399 XGSKLLKEMQRDGYKPSV 416
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR--K 175
D A E+ + Q P L+T ++ L + + +A D ++ I G++ K
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLKPDK 311
Query: 176 FGSEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAME 232
F + L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 312 F---TYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAE 366
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R PS+ T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWXGSKLLKEMQRDGYKPSVVT 418
>gi|219363731|ref|NP_001136745.1| hypothetical protein [Zea mays]
gi|194696880|gb|ACF82524.1| unknown [Zea mays]
gi|414875980|tpg|DAA53111.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
Length = 421
Score = 110 bits (274), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 140/296 (47%), Gaps = 8/296 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNILLLGFKESGDVTAM---EMFY 235
FN+++ FC ++++A V K +S + AP+ T N L+ G+ + G V M +
Sbjct: 71 FNIVISGFCKTGQLRKAGDV-AKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALL 129
Query: 236 HEMVLRGFRPSVVTYNIRIDGY--CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
EM+ G P VVT+N+ I+GY C++G D+++L EEME + L T+ ++++G
Sbjct: 130 KEMIQAGISPDVVTFNVLINGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFC 189
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ +A D + +R +KP++ YN ++ R + A D M K I +
Sbjct: 190 KKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVK 249
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY+ + G S V L D M E T +L+ C V + L +
Sbjct: 250 TYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEM 309
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ G P A + ++ G C +G + A E +M R+++ + +Y + +Y +
Sbjct: 310 VEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCK 365
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/261 (26%), Positives = 128/261 (49%), Gaps = 7/261 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-----FAPNNKTMNILLLGFKESGDVTAMEMFY 235
FNVL+ + +E K S+ KL+ A TMN +L GF + G + E +
Sbjct: 144 FNVLINGYWLCREGKVEDSI--KLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWV 201
Query: 236 HEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLV 295
+ RG +P+V+TYN +DGY + G +A + M P+++T LI G
Sbjct: 202 DGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTS 261
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTY 355
R+ L DEM ++ +K D+ YN +I +L ++ A++L+DEM E + +V Y
Sbjct: 262 RDWRSVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAY 321
Query: 356 HTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLID 415
+T+ G + +G ++ RM + K T + +K+FC ++D + +++
Sbjct: 322 NTIINGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLE 381
Query: 416 RGFCPHGHALDLLVTGLCSRG 436
+G P+ +++ +G+ +G
Sbjct: 382 KGLVPNRITYEIINSGMIEKG 402
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 77/163 (47%), Gaps = 5/163 (3%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R+ P+ ++N LL + V + + + R P + T+NI I G+CK G A
Sbjct: 28 RYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKA 87
Query: 267 MRLFEEMERVACLPSLQTITTLIHGA---GLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+ + + PS+ T TLI G G V ++ L EM + + PD+ +N +
Sbjct: 88 GDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVL 147
Query: 324 ISSLIRCRD--LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
I+ CR+ + +++L++EMEE + T +++ G K
Sbjct: 148 INGYWLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCK 190
>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
Length = 645
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 143/307 (46%), Gaps = 3/307 (0%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
N++LQA C Q + EA + LL F P+ + N +L G + ++ EMV
Sbjct: 185 NLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMV 244
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P++VT++ I C+ G F + +M C P ++ T+I G +
Sbjct: 245 AAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLE 304
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
AR + + MP L P++ YN ++ L A L+ EM +K D+VT++ +
Sbjct: 305 VARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILV 364
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L ++ ++ V ++ ++M+E +P T ++ FC +D + L + G
Sbjct: 365 DFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCR 424
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK-LED 478
P+ + +++ GLCS RW +A E QM+ + + ++ L +L + E+ +E
Sbjct: 425 PNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIEL 484
Query: 479 LDRMIKN 485
L +M+ N
Sbjct: 485 LKQMLVN 491
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 87/406 (21%), Positives = 168/406 (41%), Gaps = 33/406 (8%)
Query: 97 PHFTPTPD--AFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKF 152
P F PD ++ L L R + +LM + P+++T ++ L R F
Sbjct: 209 PSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLF 268
Query: 153 QS-------------------YEETLEAFDRMER-EIFVGI----RKFGSEE----FNVL 184
+ Y ++ + ER E+ GI +G +N L
Sbjct: 269 ERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTL 328
Query: 185 LQAFCTQKEMKEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGF 243
L+ C+ +EA + ++ + P ++ T NIL+ ++G V + +M+ G
Sbjct: 329 LKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGC 388
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
P V+TY I+G+CK+G +A+ L M C P+ + T ++ G A +
Sbjct: 389 MPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEE 448
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
L +M ++ P+ +N +I+ L + + A+EL+ +M D ++Y T+ GL
Sbjct: 449 LMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLG 508
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
K+ + +L + M++ P T + R++ + ++ + D
Sbjct: 509 KAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAV 568
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ +++ LC RG + A E M+ +E++Y +L R L
Sbjct: 569 LYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLAS 614
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 116/282 (41%), Gaps = 42/282 (14%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA----------GL 294
P+ TY + C +G DA+ + ++M R C P+ + A G+
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168
Query: 295 VRNIH--------------------------QARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+R++H R L D +P +PD+ +YNA++ L
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLC 228
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
R +LM+EM + VT+ T+ L ++ E V +++ +M E P R
Sbjct: 229 MARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVR 288
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ C R+++ + + G P+ + L+ GLCS RWEEA +M
Sbjct: 289 MYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEM 348
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVL 490
+ + + ++ +L +L Q +DR+I+ L+ +L
Sbjct: 349 FDKDCPLDDVTFNILVDFLCQNGL------VDRVIEVLEQML 384
>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
Length = 683
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 142/319 (44%), Gaps = 20/319 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTM-NILLLGFKESGDVTAMEMFYHEMV 239
+ LLQ C ++ EA +L R N M N ++ G G + Y M
Sbjct: 285 YGFLLQGLCRTRQADEA----CAMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMG 340
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN-- 297
+G P V TY+I + G CK G FG A+R+ +EME C P++ T +TL+H RN
Sbjct: 341 SKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHS--FCRNGM 398
Query: 298 IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHT 357
AR + D+M + + YN +I +L + L+ A L+ EM+ + D TY+T
Sbjct: 399 WDDARAMLDQMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
M + L + +E ++ +IE V T L+ N R GL L ++
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML--- 515
Query: 418 FCPHGHALDL-----LVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANA 472
HG LD+ L+ LC G + + ++M+ + + + SY ML L +A
Sbjct: 516 --LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGK 573
Query: 473 NEKLEDLDRMIKNLQAVLP 491
+L + + N Q + P
Sbjct: 574 VRDALELSKEMLN-QGLTP 591
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 6/233 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C M+EA +F L+ N T N L+ +G EM+
Sbjct: 456 YNTMIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEML 515
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L G + V++YN I CK+G +M L EEM P+ + LI+ +
Sbjct: 516 LHGCQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVR 575
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM + L PDI YN +I+ L + +AA+ L++++ + + D VTY+ +
Sbjct: 576 DALELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILI 635
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGY 412
K L+ L D+ I G VP RT M+++ F V +NL GY
Sbjct: 636 SWHCKVRLLDDAAMLLDKAISGGIVPNERTWGMMVQNF-----VRQTVNLEGY 683
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 127/294 (43%), Gaps = 9/294 (3%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SI++ + K + + D ME + ++ LL +FC +AR++
Sbjct: 352 SILMHGLCKLGRFGSAVRMLDEMEEKGCAP----NIVTYSTLLHSFCRNGMWDDARAMLD 407
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
++L++ F+ N++ N ++ + G + EM +G +P + TYN I C
Sbjct: 408 QMLAKGFSMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNND 467
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRN--IHQARQLFDEMPKRNLKPDIGA 319
+A +F + + + T TLIH L+RN + +L EM + D+ +
Sbjct: 468 LMEEAEHIFRNLIEEGVVANGITYNTLIHA--LLRNGRWQEGLRLASEMLLHGCQLDVIS 525
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YN +I +L + +++ +M L++EM K I +N +Y+ + L K+ + +L M+
Sbjct: 526 YNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
P T L+ C LNL L + P ++L++ C
Sbjct: 586 NQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHC 639
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/332 (20%), Positives = 141/332 (42%), Gaps = 10/332 (3%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEET 158
P + +H L ++ F A ++ ++ P+++T S +L + +++
Sbjct: 346 PDVHTYSILMHGLCKLGRFGSAVRMLDEMEEKGCAPNIVT---YSTLLHSFCRNGMWDDA 402
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNI 217
D+M + F S+ +N ++ A C ++ +A + ++ S+ P+ T N
Sbjct: 403 RAMLDQMLAKGF----SMNSQGYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNT 458
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA 277
++ + + E + ++ G + +TYN I + G + + +RL EM
Sbjct: 459 MIYHLCNNDLMEEAEHIFRNLIEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHG 518
Query: 278 CLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAM 337
C + + LI N+ ++ L +EM + +KP+ +YN +I+ L + + A+
Sbjct: 519 CQLDVISYNGLIKALCKEGNVDRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDAL 578
Query: 338 ELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFF 397
EL EM + + D VTY+T+ GL K L +++ P T +L+ +
Sbjct: 579 ELSKEMLNQGLTPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWH 638
Query: 398 CVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
C +D L I G P+ ++V
Sbjct: 639 CKVRLLDDAAMLLDKAISGGIVPNERTWGMMV 670
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/315 (20%), Positives = 119/315 (37%), Gaps = 36/315 (11%)
Query: 207 RFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
RFA P+ ++ N++L + + Y M+ P+ T+ + C+ G G
Sbjct: 135 RFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAARALCRLGRAG 194
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA+ L M R C+P T+IH + +A L DEM D+ +N ++
Sbjct: 195 DALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCAADVNTFNDLV 254
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDR------- 377
L + A L+D M + VTY + GL ++ + C + R
Sbjct: 255 LGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAMLGRLPEVNVV 314
Query: 378 ---------MIEGKFV---------------PKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
+ EGK P T +LM C R + + +
Sbjct: 315 MLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRFGSAVRMLDEM 374
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
++G P+ L+ C G W++A QML + ++ Y + L + +
Sbjct: 375 EEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGIIYALCK---D 431
Query: 474 EKLEDLDRMIKNLQA 488
KL+ R+++ +++
Sbjct: 432 GKLDQATRLVQEMKS 446
>gi|298204410|emb|CBI16890.3| unnamed protein product [Vitis vinifera]
Length = 653
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/445 (24%), Positives = 188/445 (42%), Gaps = 27/445 (6%)
Query: 62 TPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQ 121
+ L+ST++ VL L + + FFK+ + + + + +H LA+ + F
Sbjct: 61 SNLTSTILNQVLLNL--SLDGCCVSWAFFKWVESNLNHKHSLQSSWTMIHTLAKHKQFKT 118
Query: 122 AWELMSHVQR----THPSLLTL--------KSMSIMLSRISKFQS----YEETLEAFDRM 165
A L+ + + PS+L S S +LS + F + ++ ++ F+ M
Sbjct: 119 AQNLLERIAVRDYLSSPSVLNAVVRIHDDPDSNSQILSWLVIFYANSRMTQDAIQVFEHM 178
Query: 166 EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKE 224
F K VLL + + V+ K++ PN N+L+ +
Sbjct: 179 RVHGF----KPHLHACTVLLNSLAKARLTNMVWKVYKKMVRVGVVPNIHIFNVLIHACCK 234
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
SGDV E +EM R P + TYN I YCKKG +A+ + + MER P + T
Sbjct: 235 SGDVEKAEQLLNEMESRFIFPDLFTYNTLISLYCKKGMHYEALGIQDRMERGGVSPDIVT 294
Query: 285 ITTLIHG-AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM 343
+LI+G V ++ +A +L + M L P + YN+++ L + A L++EM
Sbjct: 295 YNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEM 354
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRV 403
E+++ DNVT +T+ K + K+ +M+E P T L+ FC V
Sbjct: 355 SERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEV 414
Query: 404 DLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
D ++D GF P LV + E ++ + V + YR L
Sbjct: 415 DSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRAL 474
Query: 464 QRYLVQANANEKLEDLDRMIKNLQA 488
R L + +K+E +R+ +Q
Sbjct: 475 IRRLCKI---DKIESAERIFTLMQG 496
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 118/287 (41%), Gaps = 12/287 (4%)
Query: 100 TPTPDAFEKTLHILARMRYFDQAWELMSHVQR--THPSLLTLKSMSIMLSRISKFQSYEE 157
P F +H + ++A +L++ ++ P L T ++ +S K + E
Sbjct: 219 VPNIHIFNVLIHACCKSGDVEKAEQLLNEMESRFIFPDLFTYNTL---ISLYCKKGMHYE 275
Query: 158 TLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQ-KEMKEA-RSVFVKLLSRFAPNNKTM 215
L DRMER G +N L+ FC + +++EA R V + P T
Sbjct: 276 ALGIQDRMER----GGVSPDIVTYNSLIYGFCREVNDLEEALRLREVMEVEGLHPGVVTY 331
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N +L E G + +EM R P VT N I+ YCK G G AM++ ++M
Sbjct: 332 NSILRKLCEEGKIKDANRLLNEMSERKVEPDNVTCNTLINAYCKIGDMGSAMKVKKKMLE 391
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P T LIHG + + A++ EM P Y+ ++ S + A
Sbjct: 392 AGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSYSTYSWLVDSYYDQDNKEA 451
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L DE+ K + D Y + L K +E +++ M +GK
Sbjct: 452 VIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTLM-QGK 497
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 111/260 (42%), Gaps = 10/260 (3%)
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
V+ HP ++T S+ L K + L ER++ + + N L+ A+
Sbjct: 321 VEGLHPGVVTYNSILRKLCEEGKIKDANRLLNEMS--ERKV-----EPDNVTCNTLINAY 373
Query: 189 CTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
C +M A V K+L + P+ T L+ GF + +V + + F EM+ GF PS
Sbjct: 374 CKIGDMGSAMKVKKKMLEAGLKPDQFTFKALIHGFCKLHEVDSAKEFLFEMLDAGFSPSY 433
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDE 307
TY+ +D Y + +RL +E+ R + LI + I A ++F
Sbjct: 434 STYSWLVDSYYDQDNKEAVIRLPDELSRKGLFVDISVYRALIRRLCKIDKIESAERIFTL 493
Query: 308 MPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSG 367
M + +K D Y ++ + + AA +++DEM+++R+ Y
Sbjct: 494 MQGKGMKGDSVVYTSLAYAYFKAGKAIAASDMLDEMDKRRLMITLKIYRCFSASYAGDGS 553
Query: 368 LEGVCKLYDRMIEGKFVPKT 387
+ G+ +D +IE + + K
Sbjct: 554 ILGL--FWDHVIERRLISKN 571
>gi|255660792|gb|ACU25565.1| pentatricopeptide repeat-containing protein [Verbena bonariensis]
Length = 418
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 150/341 (43%), Gaps = 17/341 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS-HVQRTHPSLLTLKSMSI 144
A+E ++ T +H P D K L L +++YF W +++ +P+ +L +I
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVLEHLMKLKYFKLVWGFYEENLECGYPA--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ K E R+ + +F I K+G FN L+ + ++ E R
Sbjct: 142 LMHSFVK--------EGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYIKLGDLNEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + + EM+ +G P+ VT+ IDG+CK
Sbjct: 194 KNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGVTFTTLIDGHCK 253
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + P L T TLI+G ++ QA+ L DEM + LKPD
Sbjct: 254 NGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFT 313
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + DL A E M ++ I D+V Y + GL + K+ M+
Sbjct: 314 YTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRSVDAEKMLREML 373
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
P+ T M++ FC V G L + G+ P
Sbjct: 374 SVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKP 414
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 124/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + + K+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEENLECGYPASLYFFNILMHSFVKEGEIRLAQSVFDAITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++++ +L + M ++PD+ Y+ +I+ L + ++ A L DEM +K + + V
Sbjct: 183 KLGDLNEGFRLKNAMQASGVQPDVYTYSVLINGLCKESKMDDANVLFDEMLDKGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLKQAQDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
I +G P L+ G C G E AFE K+M+ ++ + +Y L L Q +
Sbjct: 303 IMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDVAYTALISGLCQEGRS 362
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
D ++M++ + +V P
Sbjct: 363 ---VDAEKMLREMLSVGLKP 379
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 1/138 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ C + ++K+A+ + +++ + P+ T L+ G + GD+ + M+
Sbjct: 279 YNTLIYGLCKKGDLKQAQDLIDEMIMKGLKPDKFTYTTLIDGNCKEGDLETAFEYRKRMI 338
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
R V Y I G C++G DA ++ EM V P + T T +I+ ++
Sbjct: 339 KENIRLDDVAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVW 398
Query: 300 QARQLFDEMPKRNLKPDI 317
+L EM + KP +
Sbjct: 399 TGSKLLKEMQRDGYKPSV 416
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 75/172 (43%), Gaps = 18/172 (10%)
Query: 120 DQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR--K 175
D A E+ + Q P L+T ++ L + + +A D ++ I G++ K
Sbjct: 258 DLAMEIYKQMLSQSLSPDLITYNTLIYGLCKKGDLK------QAQDLIDEMIMKGLKPDK 311
Query: 176 FGSEEFNVLLQAFCTQKEMKEA---RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAME 232
F + L+ C + +++ A R +K R ++ L+ G + G E
Sbjct: 312 F---TYTTLIDGNCKEGDLETAFEYRKRMIKENIRL--DDVAYTALISGLCQEGRSVDAE 366
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
EM+ G +P + TY + I+ +CKKG +L +EM+R PS+ T
Sbjct: 367 KMLREMLSVGLKPEIGTYTMIINEFCKKGDVWTGSKLLKEMQRDGYKPSVVT 418
>gi|413939576|gb|AFW74127.1| hypothetical protein ZEAMMB73_460696 [Zea mays]
Length = 581
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 81/341 (23%), Positives = 140/341 (41%), Gaps = 27/341 (7%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
+ + +L+ +++ + FD M R + +N +L + +A ++
Sbjct: 145 ACTALLTALARARMTATARRVFDEMARAGLAAT----THVYNAMLHVCLKAGDAAQAEAI 200
Query: 201 FVKL------LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR------GFRPSVV 248
++ L RF + N ++ + G M Y M R G RP V
Sbjct: 201 VTRMDAAGVTLDRF-----SYNTVIALYCRKG------MGYEAMCARDRMDKEGIRPDTV 249
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
T+N I G CK+G +A +LF EM P T TTLI G N+ +A +L M
Sbjct: 250 TWNSSIHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRM 309
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
+ P + YNA++ L ++ L+ EM+ +++ D+VT +T+ K +
Sbjct: 310 EAAGMLPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDM 369
Query: 369 EGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLL 428
CK+ +M+E T L+ FC +D + ++D GF P+ L
Sbjct: 370 TSACKVKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWL 429
Query: 429 VTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
V G C + + +++ R +A YR L R L +
Sbjct: 430 VDGFCKKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCR 470
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 98/394 (24%), Positives = 159/394 (40%), Gaps = 9/394 (2%)
Query: 102 TPDAFEKT--LHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETL 159
PDA T L LAR R A + + R + T + ML K +
Sbjct: 140 APDAHACTALLTALARARMTATARRVFDEMARAGLAATT-HVYNAMLHVCLKAGDAAQAE 198
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNIL 218
RM+ V + +F +N ++ +C + EA ++ P+ T N
Sbjct: 199 AIVTRMD-AAGVTLDRF---SYNTVIALYCRKGMGYEAMCARDRMDKEGIRPDTVTWNSS 254
Query: 219 LLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC 278
+ G + G V + EMV P VTY IDGYC+ G +A++L ME
Sbjct: 255 IHGLCKEGRVKEAAQLFTEMVAAQATPDNVTYTTLIDGYCRAGNVEEAVKLRGRMEAAGM 314
Query: 279 LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAME 338
LP + T ++ N+ + +L EM R ++ D N +I++ + D+ +A +
Sbjct: 315 LPGVATYNAILRKLCEDGNMKEVHRLLHEMDGRKVQADHVTCNTLINAYCKRGDMTSACK 374
Query: 339 LMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
+ +M E + ++ TY + G K+ L+G + + +M++ F P L+ FC
Sbjct: 375 VKKKMMESGLQLNHFTYKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFC 434
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEA 458
D L + L+ RG P L+ LC +G ++A QM +
Sbjct: 435 KKNNADAVLAIPDELMKRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSL 494
Query: 459 SYRMLQ-RYLVQANANEKLEDLDRMIKNLQAVLP 491
Y L YL + N L LD M KN + P
Sbjct: 495 VYATLAYTYLTKGNPTAALNTLDGMTKNQLYITP 528
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 63/147 (42%), Gaps = 1/147 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+ L+ FC +E+ A+ F +++ + F+PN + L+ GF + + A+ E++
Sbjct: 391 YKALIHGFCKARELDGAKEAFFQMVDAGFSPNYSVFSWLVDGFCKKNNADAVLAIPDELM 450
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
RG P Y I C+KG A R+F++M+ + TL + N
Sbjct: 451 KRGLPPDKAVYRSLIRRLCRKGLVDQAQRVFDQMQSKGLVGDSLVYATLAYTYLTKGNPT 510
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISS 326
A D M K L YN + +S
Sbjct: 511 AALNTLDGMTKNQLYITPQIYNCLCTS 537
>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
Length = 684
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ +C ++ AR + + AP+ T ++ G + G V +M+
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASM--PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +PSVVTY + ++ CK FG AM + +EM C P++ T +I+G +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+ + + +PD +Y ++ L + EL EM EK + VT+ +
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +E ++ ++M T +++ C RVD + G P
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ GLC RWE+A E K+M+ + +E ++ L Q
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 88 EFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
+ F+F + +PD ++ L L R ++ A EL+ + R + P+ +T +
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L + + +E E+ + +N L+ FC Q + A +F
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNI-------VTYNALVNGFCVQGRVDSALELFYS 450
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T LL G + + A EM+ + P+VVT+N+ + +C+KG
Sbjct: 451 MPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ L E+M C P+L T TL+ G N +A +L + + PDI Y+++
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSI 568
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L R + A+++ +++ + V Y+ + L K +G + M+
Sbjct: 569 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 628
Query: 384 VPKTRTVVMLMK 395
+P T + L++
Sbjct: 629 MPNELTYITLIE 640
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 24/392 (6%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PDA+ T I L +A L+ + + PS++T +++L + K + +
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY---TVLLEAVCKSTGFGQA 199
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+E D M R G +NV++ C + + +AR +L S F P+
Sbjct: 200 MEVLDEM--------RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ +L G + +E + EM+ + P+ VT+++ + +C+ G A+++ E+M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C + +I+ + A Q + M PD +Y ++ L R
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A EL+ EM K + VT++T L + +E L ++M E T L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FCV RVD L L+ + + P+ L+TGLC+ R + A E +ML +
Sbjct: 432 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 488
Query: 454 QVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
+ ++ +L + Q +E +E +++M++
Sbjct: 489 APNVVTFNVLVSFFCQKGLMDEAIELVEQMME 520
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/302 (21%), Positives = 135/302 (44%), Gaps = 4/302 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C + ++A+ + +++ + P N+ T N + + G + M +M
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTYN ++G+C +G A+ LF M C P+ T TTL+ G +
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM +++ P++ +N ++S + ++ A+EL+++M E + +TY+T+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ E +L ++ P T ++ RV+ + ++ + D G
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + ++ LC R + A + M+ +E +Y L L + ++ DL
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654
Query: 480 DR 481
R
Sbjct: 655 LR 656
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 96/235 (40%), Gaps = 3/235 (1%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P V I C++G DA R+ ER + TL+ G +
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+L MP + PD Y +I L + A+ L+D+M + VTY +
Sbjct: 132 ARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ KS+G ++ D M P T +++ C RVD L GF P
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ ++ GLC+ RWE+ E +M+ + +E ++ ML R+ + E+
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 63/170 (37%), Gaps = 38/170 (22%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKE--------------- 224
FNVL+ FC + M EA + +++ PN T N LL G
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLV 554
Query: 225 ----SGDVT-----------------AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
S D+ A++MF H + G RP V YN + CK+
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMF-HIVQDLGMRPKAVIYNKILLALCKRCNT 613
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
A+ F M C+P+ T TLI G + + R L E+ R +
Sbjct: 614 DGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|224089100|ref|XP_002308636.1| predicted protein [Populus trichocarpa]
gi|222854612|gb|EEE92159.1| predicted protein [Populus trichocarpa]
Length = 607
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 171/402 (42%), Gaps = 15/402 (3%)
Query: 62 TPLSSTLVENVLG---RLFAAHSNGLKAL-EFFKFTLQHPHFTPTPDAFEKTLHILARMR 117
T L T +E LG +F + K L F + + P F + F ++ L + R
Sbjct: 102 TALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQSSAALFNSMVNFLGKAR 161
Query: 118 YFDQAWELMSHVQRTHPS----LLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGI 173
F AW L+ + R + L++ + +I++ R ++ E + F+ +
Sbjct: 162 EFGSAWCLL--LDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAIRTFEYASSLDLIHN 219
Query: 174 RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR---FAPNNKTMNILLLGFKESGDVTA 230
+ G+ F +LL + C + ++ A F + + + + P+ + NILL G+ S +
Sbjct: 220 SEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKH 279
Query: 231 MEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIH 290
E + EM + +PSVVTY ++GY + A+ L +EM+R + +I
Sbjct: 280 AERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELVDEMKREGIKSNAIVYNPIID 339
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
+ + + P I YN+++ + DL A +++ M + +
Sbjct: 340 ALAEAGRFKEVLGMMEHFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFP 399
Query: 351 DNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLW 410
TY+ F K +E LY +MIE + P T +L+K C R+DL + +
Sbjct: 400 TPTTYNYFFRHFSKCRKIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQIS 459
Query: 411 GYLIDRGFCPHGHALDLLVTG-LCSRGRWEEAFECSKQMLVR 451
+ RG C A + T LC R+EEAF + ML R
Sbjct: 460 KEMRARG-CDMDLATSTMFTHLLCKMQRFEEAFAEFEDMLRR 500
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 120/312 (38%), Gaps = 14/312 (4%)
Query: 86 ALEFFKFTLQH-PHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSM 142
A ++F ++ P + P+ + L+ R R A L +++ + PS++T ++
Sbjct: 243 ATDYFDRKVEKDPCWVPSVRIYNILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTL 302
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
SR+ + E +E D M+RE GI K + +N ++ A KE +
Sbjct: 303 VEGYSRMRRV---ERAIELVDEMKRE---GI-KSNAIVYNPIIDALAEAGRFKEVLGMME 355
Query: 203 KL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
L P T N L+ G+ ++GD+ M+ R P+ TYN + K
Sbjct: 356 HFFLCEEGPTISTYNSLVKGYCKAGDLVGASKILKMMISREVFPTPTTYNYFFRHFSKCR 415
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
+ M L+ +M P T L+ + A Q+ EM R D+
Sbjct: 416 KIEEGMNLYTKMIESGYTPDRLTYHLLLKMLCEEERLDLAVQISKEMRARGCDMDLATST 475
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE---GVCKLYDRM 378
L + + A ++M + I +T+H + K E +CKL +
Sbjct: 476 MFTHLLCKMQRFEEAFAEFEDMLRRGIVPQYLTFHRLNDEFRKQGLTELARRLCKLMSSV 535
Query: 379 IEGKFVPKTRTV 390
K +P T V
Sbjct: 536 SHSKNLPNTYNV 547
>gi|357442909|ref|XP_003591732.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480780|gb|AES61983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 344
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/318 (25%), Positives = 149/318 (46%), Gaps = 20/318 (6%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ C K + +A ++ ++++ + +P+ T N L+ GF G + + +MV
Sbjct: 20 YNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFGLFSQMV 79
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ PSV T+ I +DG CK+G +A + M + LP++ T T+++ G LV ++
Sbjct: 80 LKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYCLVNEVN 139
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ + +F + + + P+ +YN MI+ + + +N A+ L EM + I VTY ++
Sbjct: 140 KTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLI 199
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-- 417
GL KS+ L + M+ P T V+ + C + +D + L + D+G
Sbjct: 200 DGLCKSTMLGSLLMRCMLMVNHLIYPLT---VLYIDALCKSNHLDKAIALVKKIKDQGRL 256
Query: 418 ---------FCPHGHAL-----DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G++L ++++ GLC G ++EA +M +Y
Sbjct: 257 KNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETN 316
Query: 464 QRYLVQANANEKLEDLDR 481
R L + NEK E L R
Sbjct: 317 IRALFHKDENEKAEKLFR 334
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/299 (24%), Positives = 127/299 (42%), Gaps = 27/299 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSH--VQRTHPSLLTLKSMSIMLSRISKFQSYE 156
+P F ++ + A+ L S ++ +PS+ T +I++ + K +
Sbjct: 48 ISPDVATFNSLIYGFCIIGQLKDAFGLFSQMVLKNINPSVYTF---TILVDGLCKEGKMK 104
Query: 157 ETLEAFDRMERE-IFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNK 213
E M ++ + + + S +++ +C E+ + + VF + +SR APN +
Sbjct: 105 EAKSVIAMMMKDGVLPNVVTYTS-----IMEGYCLVNEVNKTKHVF-RTISRMGVAPNTQ 158
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA-MRLFEE 272
+ NI++ GF + V + + EM RG P VTY+ IDG CK G MR
Sbjct: 159 SYNIMINGFCKIKIVNEALILFKEMCCRGIVPITVTYSSLIDGLCKSTMLGSLLMRCMLM 218
Query: 273 MER------VACLPSLQTITTLIHGAGLVRNIH------QARQLFDEMPKRNLKPDIGAY 320
+ V + +L L LV+ I A+ +F ++ + +I Y
Sbjct: 219 VNHLIYPLTVLYIDALCKSNHLDKAIALVKKIKDQGRLKNAQDVFQDLLIKGYSLNIQTY 278
Query: 321 NAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
N MI+ L + + A L+ +M++ I D VTY T L E KL+ +MI
Sbjct: 279 NIMINGLCKEGLFDEAEALLSKMDDYGIIPDAVTYETNIRALFHKDENEKAEKLFRKMI 337
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/190 (24%), Positives = 83/190 (43%)
Query: 244 RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQ 303
VV YN IDG CK DA L+ EM P + T +LI+G ++ + A
Sbjct: 14 NSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYGFCIIGQLKDAFG 73
Query: 304 LFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLM 363
LF +M +N+ P + + ++ L + + A ++ M + + + VTY ++ G
Sbjct: 74 LFSQMVLKNINPSVYTFTILVDGLCKEGKMKEAKSVIAMMMKDGVLPNVVTYTSIMEGYC 133
Query: 364 KSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGH 423
+ + ++ + P T++ +++ FC V+ L L+ + RG P
Sbjct: 134 LVNEVNKTKHVFRTISRMGVAPNTQSYNIMINGFCKIKIVNEALILFKEMCCRGIVPITV 193
Query: 424 ALDLLVTGLC 433
L+ GLC
Sbjct: 194 TYSSLIDGLC 203
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 51/105 (48%)
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKF 396
M + D++E K + D V Y+T+ GL K + +LY MI K P T L+
Sbjct: 2 MLVNDQIEGKLVNSDVVMYNTIIDGLCKDKLVNDAYELYSEMIAEKISPDVATFNSLIYG 61
Query: 397 FCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
FC+ ++ L+ ++ + P + +LV GLC G+ +EA
Sbjct: 62 FCIIGQLKDAFGLFSQMVLKNINPSVYTFTILVDGLCKEGKMKEA 106
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 47/92 (51%)
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
K+ G + + + +++++G+ ++ TYNI I+G CK+G F +A L +M+ +P
Sbjct: 250 IKDQGRLKNAQDVFQDLLIKGYSLNIQTYNIMINGLCKEGLFDEAEALLSKMDDYGIIPD 309
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
T T I +A +LF +M R L
Sbjct: 310 AVTYETNIRALFHKDENEKAEKLFRKMIARGL 341
>gi|255660938|gb|ACU25638.1| pentatricopeptide repeat-containing protein [Citharexylum
montevidense]
Length = 481
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 114/468 (24%), Positives = 194/468 (41%), Gaps = 64/468 (13%)
Query: 68 LVENVL-GRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELM 126
LV NVL G + H AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVLHGAKKSEH-----ALQFFRWVZRSNLFEHNRETHLKIIEILGRASKLNHARCIL 68
Query: 127 SHVQRT----HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFN 182
+ + L L M+ K +E+++ F +ME +G+ + + ++
Sbjct: 69 LDMPKKGLQWDEDLWVL-----MIDSYGKAGIVQESVKLFHKMEE---LGVER-TIKSYD 119
Query: 183 VLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR 241
VL + + A+ F K+LS P T NI++ GF SG V F+ +M R
Sbjct: 120 VLFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNIMIWGFFLSGKVETAXRFFEDMKSR 179
Query: 242 GFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQA 301
P V+TYN I+GY + +A + F EM+ P++ T TTLI G V + A
Sbjct: 180 DITPDVITYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTHTTLIKGYVAVDRVDDA 239
Query: 302 RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFF 360
+L +EM +KP+ Y+ + L ++ A + EM +K I DN + +
Sbjct: 240 LRLVEEMKGFGIKPNAITYSTXLPGLCNAEKMSEARSXLKEMVDKYIAPTDNSIFLRLIS 299
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG--- 417
G K+ L+ + MI + +L++ +C + D ++L LI++
Sbjct: 300 GQCKAGNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAVQYDKAISLLDKLIEKDIIL 359
Query: 418 -------------------FCPHGH--------------------ALDLLVTGLCSRGRW 438
C +G AL+ L+ G G
Sbjct: 360 RPQSTSHMEPSAYNPLIEYLCNNGQTAKAETLVRQLMKLGVQDATALNTLIRGHSQEGSP 419
Query: 439 EEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRMIKN 485
+ AFE K ML R+ +++Y ++Q YL ++ + LD MI+N
Sbjct: 420 DSAFELLKIMLRRKXDSEKSAYNSLVQCYLKKSEPADAKTALDSMIEN 467
>gi|224149779|ref|XP_002336862.1| predicted protein [Populus trichocarpa]
gi|222837029|gb|EEE75408.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 144/315 (45%), Gaps = 24/315 (7%)
Query: 34 ERITRIINDH-------PFPDQPLH--PTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGL 84
E++ +I DH P P + P+L QT ++ +++ R S G+
Sbjct: 63 EKLHSLIKDHYRNNPNKTLPPDPTYTIPSLSLDFSQTISTVHSISPSII-RHVIEQSGGV 121
Query: 85 K-------ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLL 137
+ L FF + F +P+AF + + ++R FD AW ++ + + +
Sbjct: 122 RHGIPVPQVLAFFNWASYQDGFDKSPEAFNEMVDFAGKVRMFDLAWHVID-LMKARDVEI 180
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+++ SI++ R + E + AF+RME K F++L+ C ++ EA
Sbjct: 181 TVETFSILMRRYVRAGLAAEAIHAFNRMEDYNC----KPDKIAFSILISILCRKRRASEA 236
Query: 198 RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGY 257
+ F L +F P+ L+ G+ +G+++ E + EM + G +P+V TY+I ID
Sbjct: 237 QEFFDSLKDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSL 296
Query: 258 CKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDI 317
C+ G A +F EM C P+ T +L+ + Q++++M + +PD
Sbjct: 297 CRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDT 356
Query: 318 GAYNAMISSLIRCRD 332
YN +I + C+D
Sbjct: 357 VTYNFLIET--HCKD 369
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 1/186 (0%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
+T +IL+ + +G ++ M +P + ++I I C+K +A F+
Sbjct: 183 ETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDS 242
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
+ + P + T L+ G NI +A ++F EM +KP++ Y+ +I SL RC
Sbjct: 243 L-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQ 301
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
+ A ++ EM + +++TY+++ +K+ E V ++Y++M P T T
Sbjct: 302 ITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAGRTEKVLQVYNQMKRLGCEPDTVTYNF 361
Query: 393 LMKFFC 398
L++ C
Sbjct: 362 LIETHC 367
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 87/212 (41%), Gaps = 4/212 (1%)
Query: 225 SGDVTAMEMFYHEMVL---RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+G V ++ +H + L R +V T++I + Y + G +A+ F ME C P
Sbjct: 157 AGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAFNRMEDYNCKPD 216
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
+ LI R +A++ FD + K +PD+ Y ++ R +++ A +
Sbjct: 217 KIAFSILISILCRKRRASEAQEFFDSL-KDKFEPDVIVYTNLVRGWCRAGNISEAERVFG 275
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
EM+ I + TY + L + + ++ M++ P + T LM+
Sbjct: 276 EMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITYNSLMRIHVKAG 335
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLC 433
R + L ++ + G P + L+ C
Sbjct: 336 RTEKVLQVYNQMKRLGCEPDTVTYNFLIETHC 367
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 85/206 (41%), Gaps = 1/206 (0%)
Query: 281 SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELM 340
S + ++ AG VR A + D M R+++ + ++ ++ +R A+
Sbjct: 146 SPEAFNEMVDFAGKVRMFDLAWHVIDLMKARDVEITVETFSILMRRYVRAGLAAEAIHAF 205
Query: 341 DEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVN 400
+ ME+ D + + + L + + +D + + KF P L++ +C
Sbjct: 206 NRMEDYNCKPDKIAFSILISILCRKRRASEAQEFFDSL-KDKFEPDVIVYTNLVRGWCRA 264
Query: 401 FRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+ ++G + G P+ + +++ LC G+ A + +ML Q + +Y
Sbjct: 265 GNISEAERVFGEMKVAGIKPNVYTYSIVIDSLCRCGQITRAHDVFAEMLDAGCQPNSITY 324
Query: 461 RMLQRYLVQANANEKLEDLDRMIKNL 486
L R V+A EK+ + +K L
Sbjct: 325 NSLMRIHVKAGRTEKVLQVYNQMKRL 350
>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
Length = 684
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 69/289 (23%), Positives = 124/289 (42%), Gaps = 2/289 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N L+ +C ++ AR + + AP+ T ++ G + G V +M+
Sbjct: 116 YNTLVAGYCRYGQLDAARRLIASM--PVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLH 173
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG +PSVVTY + ++ CK FG AM + +EM C P++ T +I+G +
Sbjct: 174 RGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDD 233
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+ + + +PD +Y ++ L + EL EM EK + VT+ +
Sbjct: 234 AREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVR 293
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ +E ++ ++M T +++ C RVD + G P
Sbjct: 294 FFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSP 353
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+ ++ GLC RWE+A E K+M+ + +E ++ L Q
Sbjct: 354 DTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQ 402
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 136/312 (43%), Gaps = 13/312 (4%)
Query: 88 EFFKFTLQHPHFTPTPD--AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMS 143
+ F+F + +PD ++ L L R ++ A EL+ + R + P+ +T +
Sbjct: 338 DAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFI 397
Query: 144 IMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK 203
+L + + +E E+ + +N L+ FC Q + A +F
Sbjct: 398 CILCQKGLIEQATMLIEQMSEHGCEVNI-------VTYNALVNGFCVQGRVDSALELFYS 450
Query: 204 LLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ + PN T LL G + + A EM+ + P+VVT+N+ + +C+KG
Sbjct: 451 MPCK--PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLM 508
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A+ L E+M C P+L T TL+ G N +A +L + + PDI Y+++
Sbjct: 509 DEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSI 568
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I L R + A+++ +++ + V Y+ + L K +G + M+
Sbjct: 569 IGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGC 628
Query: 384 VPKTRTVVMLMK 395
+P T + L++
Sbjct: 629 MPNELTYITLIE 640
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 90/392 (22%), Positives = 168/392 (42%), Gaps = 24/392 (6%)
Query: 103 PDAFEKTLHI--LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEET 158
PDA+ T I L +A L+ + + PS++T +++L + K + +
Sbjct: 143 PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTY---TVLLEAVCKSTGFGQA 199
Query: 159 LEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
+E D M R G +NV++ C + + +AR +L S F P+
Sbjct: 200 MEVLDEM--------RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTV 251
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
+ +L G + +E + EM+ + P+ VT+++ + +C+ G A+++ E+M
Sbjct: 252 SYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQM 311
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
C + +I+ + A Q + M PD +Y ++ L R
Sbjct: 312 SGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERW 371
Query: 334 NAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVML 393
A EL+ EM K + VT++T L + +E L ++M E T L
Sbjct: 372 EDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNAL 431
Query: 394 MKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRR 453
+ FCV RVD L L+ + + P+ L+TGLC+ R + A E +ML +
Sbjct: 432 VNGFCVQGRVDSALELFYSMPCK---PNTITYTTLLTGLCNAERLDAAAELLAEMLQKDC 488
Query: 454 QVSEASYRMLQRYLVQAN-ANEKLEDLDRMIK 484
+ ++ +L + Q +E +E +++M++
Sbjct: 489 APNVVTFNVLVSFFCQKGLMDEAIELVEQMME 520
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/302 (22%), Positives = 136/302 (45%), Gaps = 4/302 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNK-TMNILLLGFKESGDVTAMEMFYHEMV 239
+ +L+ C + ++A+ + +++ + P N+ T N + + G + M +M
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G ++VTYN ++G+C +G A+ LF M C P+ T TTL+ G +
Sbjct: 418 EHGCEVNIVTYNALVNGFCVQGRVDSALELFYSM---PCKPNTITYTTLLTGLCNAERLD 474
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L EM +++ P++ +N ++S + ++ A+EL+++M E + +TY+T+
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ K E +L ++ P T ++ RV+ + ++ + D G
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
P + ++ LC R + A + M+ +E +Y L L + ++ DL
Sbjct: 595 PKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDL 654
Query: 480 DR 481
R
Sbjct: 655 LR 656
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 96/235 (40%), Gaps = 3/235 (1%)
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
RG P V I C++G DA R+ ER + TL+ G +
Sbjct: 72 RGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDA 131
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFF 360
AR+L MP + PD Y +I L + A+ L+D+M + VTY +
Sbjct: 132 ARRLIASMP---VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLE 188
Query: 361 GLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCP 420
+ KS+G ++ D M P T +++ C RVD L GF P
Sbjct: 189 AVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQP 248
Query: 421 HGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEK 475
+ ++ GLC+ RWE+ E +M+ + +E ++ ML R+ + E+
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVER 303
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 62/169 (36%), Gaps = 36/169 (21%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGF-KESGDVTAMEMF---- 234
FNVL+ FC + M EA + +++ PN T N LL G K+ A+E+
Sbjct: 495 FNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLV 554
Query: 235 ------------------------------YHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
+H + G RP V YN + CK+
Sbjct: 555 SNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTD 614
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
A+ F M C+P+ T TLI G + + R L E+ R +
Sbjct: 615 GAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRGV 663
>gi|255660924|gb|ACU25631.1| pentatricopeptide repeat-containing protein [Lampayo castellani]
Length = 484
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 110/464 (23%), Positives = 193/464 (41%), Gaps = 56/464 (12%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HGAKNSEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 128 HVQRTHPSLLTLKSMSI-MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQ 186
+ + L + M + M+ K +E+++ F +ME +G+ + + ++ L +
Sbjct: 70 DMPKK--GLEWDEDMWVLMIDSYGKEGIVQESVKLFQKMEE---LGVER-TIKSYDALFK 123
Query: 187 AFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRP 245
+ A+ F K+LS P T N+++ GF SG V F+ +M R P
Sbjct: 124 VIMRRGRFMMAKRYFNKMLSXGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISP 183
Query: 246 SVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF 305
V+TYN I+GY + +A + F EM+ P++ T TTLI G V + A +L
Sbjct: 184 DVITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPTVVTYTTLIKGYVSVDQVDDALRLV 243
Query: 306 DEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMK 364
+EM +KP+ Y+ ++ L ++ A ++ EM +K I DN + + K
Sbjct: 244 EEMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCK 303
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG------- 417
+ L+ + MI + +L++ +C + D + L LI++
Sbjct: 304 AGNLDAAADVLKSMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQS 363
Query: 418 ---------------FCPHGH--------------------ALDLLVTGLCSRGRWEEAF 442
C +G AL+ L+ G G + AF
Sbjct: 364 TLHMEPSAYNPIVEYLCNNGQTSKAEALVRQLMKLGVQDPTALNTLIRGHSQEGSPDSAF 423
Query: 443 ECSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
E K ML R+ +++Y ++Q YL ++ + LD MI+N
Sbjct: 424 ELLKIMLRRKVGSEKSAYDSLVQSYLKKSEPADAKAALDSMIEN 467
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/268 (20%), Positives = 118/268 (44%), Gaps = 18/268 (6%)
Query: 130 QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFC 189
+ P+++T ++ I + S ++ +A +E GI K + ++ LL C
Sbjct: 214 KNIEPTVVTYTTL------IKGYVSVDQVDDALRLVEEMKGYGI-KPNAITYSTLLPGLC 266
Query: 190 TQKEMKEARSVFVKLLSRF-APNNKTMNILLLGFK-ESGDVTAMEMFYHEMVLRGFRPSV 247
++M EARS+ +++ ++ AP + ++ + L+ + ++G++ A M+
Sbjct: 267 NAEKMSEARSILKEMVDKYIAPTDNSIFMRLISSQCKAGNLDAAADVLKSMIRLSVPTEA 326
Query: 248 VTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG------LVRN--IH 299
Y + I+ YCK G + A++L +++ + Q+ + A L N
Sbjct: 327 GHYGVLIENYCKAGQYDQAVKLLDKLIEKDIIVRPQSTLHMEPSAYNPIVEYLCNNGQTS 386
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L ++ K ++ D A N +I + ++A EL+ M +++G + Y ++
Sbjct: 387 KAEALVRQLMKLGVQ-DPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVGSEKSAYDSLV 445
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+K S D MIE +P +
Sbjct: 446 QSYLKKSEPADAKAALDSMIENDHLPDS 473
>gi|410109933|gb|AFV61046.1| pentatricopeptide repeat-containing protein 11, partial [Lippia
micromera]
Length = 431
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 150/352 (42%), Gaps = 17/352 (4%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A+E ++ T +H P D K L L +++YF W + + +P +L +I
Sbjct: 91 AIECYRLTREHKFXXPF-DTCRKVLEHLMKLKYFKLVWGFYKEILECGYPX--SLYFFNI 147
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K + R+ +F I K+G +N L+ + ++ E R
Sbjct: 148 LMHRFCK--------DGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRL 199
Query: 200 VFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
S P+ T ++L+ G + + + EM+++G P+ VT+ IDG+CK
Sbjct: 200 KSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCK 259
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
G AM ++++M + LP L T LI+G ++ QA L EM + LKPD
Sbjct: 260 NGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKIT 319
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
Y +I + +LB A E M E+ I D+V Y + GL + K+ M+
Sbjct: 320 YTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXML 379
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
P T M++ FC V G L + G P ++L+ G
Sbjct: 380 SVGLKPDAXTYTMIINEFCKKGDVWKGSKLLKEMQRDGHVPSVVTYNVLMNG 431
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 64/248 (25%), Positives = 108/248 (43%)
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
NIL+ F + GD+ + + G RPSVV+YN ++GY + G + RL M
Sbjct: 146 NILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYIRLGDLDEGFRLKSAMXA 205
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P + T + LI+G + A +LFDEM + L P+ + +I + ++
Sbjct: 206 SGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXVTFTTLIDGHCKNGRVDL 265
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
AME+ +M + + D +TY+ + +GL K L+ L M P T L+
Sbjct: 266 AMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEMSMKGLKPDKITYTTLID 325
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C +B +I+ A L++GLC GR +A + + ML +
Sbjct: 326 GCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEGRXVDAEKMLRXMLSVGLKP 385
Query: 456 SEASYRML 463
+Y M+
Sbjct: 386 DAXTYTMI 393
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 122/260 (46%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ S+ +NI + +CK G A +F+ + + PS+ + TL++G
Sbjct: 129 FYKEILECGYPXSLYFFNILMHRFCKDGDIRVAXSVFDAITKWGLRPSVVSYNTLMNGYI 188
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A EL DEM K + + V
Sbjct: 189 RLGDLDEGFRLKSAMXASGVQPDVYTYSVLINGLCKEXKMDDANELFDEMLVKGLVPNXV 248
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 249 TFTTLIDGHCKNGRVDLAMEIYKQMLSQSLLPDLITYNXLIYGLCKKGDLKQANDLIXEM 308
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G + AFE +M+ ++ + +Y L L Q
Sbjct: 309 SMKGLKPDKITYTTLIDGCCKEGNLBTAFEHRXRMIEENIRLDDVAYTALISGLCQEG-- 366
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 367 -RXVDAEKMLRXMLSVGLKP 385
>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
[Vitis vinifera]
Length = 2037
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 147/352 (41%), Gaps = 12/352 (3%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQ 153
+P P F+ + + + D A E V PS+ T +++L+ + K +
Sbjct: 907 YPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTC---NMILASMVKDK 963
Query: 154 SYEETLEAFDRMEREIFVGI-RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
E F M + GI G+ FN+L+ C + +K+A ++ ++ F P
Sbjct: 964 RTELVWSLFREMSDK---GICPNVGT--FNILINGLCVEGNLKKAGNLLKQMEENGFVPT 1018
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N LL + + G A M+ +G V TYN+ ID C A L +
Sbjct: 1019 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 1078
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M + P+ T TLI+G I A Q+F+EM K +L P+ YNA+I
Sbjct: 1079 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 1138
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
D A+ L+D ME + + VTY T+ GL K E +L +RM V
Sbjct: 1139 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 1198
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+L+ C N +D + L G + G P L+ G C G + A E
Sbjct: 1199 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 1250
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 5/305 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + + +L+ K Y+ +E D M I GI +NV + CT +A
Sbjct: 1018 TIVTYNTLLNWYCKKGRYKAAIELIDYM---ICKGIEA-DVCTYNVFIDNLCTNHRSAKA 1073
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ K+ +PN T N L+ GF + G + ++EM P+ VTYN I G
Sbjct: 1074 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 1133
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C G F +A+RL + ME + T TL++G A++L + M ++
Sbjct: 1134 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 1193
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
AY +I L + L+ A++L+ M + + D +TY ++ G + ++ ++
Sbjct: 1194 HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 1253
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
RM V L+ FC + V + ++ + G ++LV+ LC G
Sbjct: 1254 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 1313
Query: 437 RWEEA 441
+ EA
Sbjct: 1314 KLGEA 1318
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 20/348 (5%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ FE +L RMR D ++ H+ T +++ + K +E ++
Sbjct: 1173 EKFELAKRLLERMRVNDM---VVGHIAYT-----------VLIDGLCKNGMLDEAVQLVG 1218
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
M ++ G+ ++ L+ FC +K A+ + ++ S N + L+ F
Sbjct: 1219 NMYKD---GVNP-DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 1274
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ G+VT Y M G T N+ + C+ G G+A + M R+ +P+
Sbjct: 1275 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 1334
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +I+G G + + A FD+M K P Y +++ L + +L A + ++
Sbjct: 1335 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 1394
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ D+V Y+T+ KS L L+D+M++ +P + T L+ C +
Sbjct: 1395 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 1454
Query: 403 VDLGLNLWGYLIDRGFCPHGHAL-DLLVTGLCSRGRWEEAFECSKQML 449
+ L+G + RG H + LV GL G + AF ++M+
Sbjct: 1455 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 1502
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 109/498 (21%), Positives = 192/498 (38%), Gaps = 50/498 (10%)
Query: 5 KRLKRSDKFPGISDRLAL--LFSTTTQSSEIERIT----RIINDHPFPDQPLHPTLLQHL 58
K L R PG D + L + T +S + +++ ++ PD + +LL L
Sbjct: 1390 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 1449
Query: 59 PQT--TPLSSTLVENVLGR--LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILA 114
+ + L +GR LF H +T D K H A
Sbjct: 1450 CRKGKAVTAVCLFGTAMGRGTLFP----------------NHVMYTCLVDGLSKAGHPKA 1493
Query: 115 RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
+F+ E+M + T P + ++ SR + + F +R
Sbjct: 1494 AFYFFE---EMMK--KGTCPDTVAFNAIIDSCSRRGQMMK-----------ANDFFSTMR 1537
Query: 175 KFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
+G +N+LL F ++ + S++ ++ P+ T + L+LG +SG
Sbjct: 1538 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 1597
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+M++ G T+NI I+ Y + G A L M + P T +
Sbjct: 1598 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 1657
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G ++ + EM + + P Y +I+ + R D+ A +L DEME G
Sbjct: 1658 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 1717
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
V M GL+ E + D M+ + +P T LM FC + ++ L L
Sbjct: 1718 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1777
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G + G A ++L+ G+C+ G AFE ++M R + +Y +L +
Sbjct: 1778 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1837
Query: 470 ANANEKLEDLDRMIKNLQ 487
AN L ++++ +LQ
Sbjct: 1838 AN---NLIQGEKLLTDLQ 1852
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 10/297 (3%)
Query: 197 ARSVFVKLLSRFAPNNK---TMNILLLGFKESGDVT-AMEMFYHEMV-LRGFRPSVVTYN 251
++S+F L+ + N ++L+ + + G + A+E F E+V L GF+PSV T N
Sbjct: 896 SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETF--ELVGLVGFKPSVYTCN 953
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ + K LF EM P++ T LI+G + N+ +A L +M +
Sbjct: 954 MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 1013
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P I YN +++ + AA+EL+D M K I D TY+ L +
Sbjct: 1014 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 1073
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L +M + P T L+ F ++ + ++ + P+ + L+ G
Sbjct: 1074 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 1133
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
C G +EEA M +++E +Y L L + +EK E R+++ ++
Sbjct: 1134 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK---HEKFELAKRLLERMRV 1187
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 42/107 (39%)
Query: 207 RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDA 266
R P T L+ F + M L G + VV YN+ I G C G A
Sbjct: 1750 RLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAA 1809
Query: 267 MRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
L+EEM P++ T L+ N+ Q +L ++ +R L
Sbjct: 1810 FELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856
>gi|359491272|ref|XP_003634254.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74900,
mitochondrial-like [Vitis vinifera]
Length = 450
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 103/400 (25%), Positives = 167/400 (41%), Gaps = 22/400 (5%)
Query: 48 QPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFE 107
Q L TL ++ + TP LV+ VL L+ ++G KAL+FFK HP + +F+
Sbjct: 52 QTLTRTLEKYPVEWTP---NLVDRVLKLLW---NHGPKALQFFKSLDYHPTYAHVSSSFD 105
Query: 108 KTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMER 167
+ I R+R + W L+ + RT K+ +I+ R + ++ F M
Sbjct: 106 HAIDIAGRLRDYKTLWTLVDRM-RTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHE 164
Query: 168 EIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESG 226
V FN +L C K ++ A + K+ RF ILL GF +G
Sbjct: 165 HGCVQ----DLNSFNTILDVLCKSKRVEMADNKLFKVFRGRF-------RILLKGFFRAG 213
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
+ F+ +M R VVTY + G+ G A R+F EM LPS+ T
Sbjct: 214 QLKEAWEFFLQMKKRKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYN 273
Query: 287 TLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEK 346
I N+ A +F+EM ++ P+ YN +I L + AME M M++
Sbjct: 274 AFIQVLCKKDNVENAISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDD 333
Query: 347 RIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLG 406
+ Y+ + + +E ++++M + +P T +L+ V + D
Sbjct: 334 ECEPNVQIYNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYL 393
Query: 407 LNLWGYLI---DRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
L LI +RGF P + ++ GL G + A E
Sbjct: 394 LTAGKLLIEMVERGFLPRKFTFNRVLDGLLLTGNQDFAKE 433
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 56/262 (21%), Positives = 109/262 (41%), Gaps = 16/262 (6%)
Query: 227 DVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTIT 286
D + M R P+ T+ I + Y G A+++F M C+ L +
Sbjct: 116 DYKTLWTLVDRMRTRRLGPNPKTFAIITERYVSAGKPDRAIKIFFSMHEHGCVQDLNSFN 175
Query: 287 TLIHGAGLVRNIHQA-RQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEE 345
T++ + + A +LF K G + ++ R L A E +M++
Sbjct: 176 TILDVLCKSKRVEMADNKLF--------KVFRGRFRILLKGFFRAGQLKEAWEFFLQMKK 227
Query: 346 KRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDL 405
++ D VTY T+ G + + ++++ MI +P T ++ C V+
Sbjct: 228 RKCEIDVVTYTTVVHGFGVAGEVRKAQRVFNEMIGEGVLPSVATYNAFIQVLCKKDNVEN 287
Query: 406 GLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQR 465
++++ ++ +G+ P+ ++++ GLC GR E+A E +M + + Y ++ R
Sbjct: 288 AISVFEEMLRKGYMPNSTTYNVVIRGLCHVGRMEKAMEFMARMKDDECEPNVQIYNVVIR 347
Query: 466 YLVQA-------NANEKLEDLD 480
Y A N EK+ D D
Sbjct: 348 YFCDAEEIEKGLNVFEKMGDAD 369
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 49/104 (47%), Gaps = 4/104 (3%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF---KESGDVTAMEMFYH 236
+NV+++ FC +E+++ +VF K+ + PN T NIL+ K+S +
Sbjct: 342 YNVVIRYFCDAEEIEKGLNVFEKMGDADCLPNLDTYNILISAMFVRKKSDYLLTAGKLLI 401
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP 280
EMV RGF P T+N +DG G A + R LP
Sbjct: 402 EMVERGFLPRKFTFNRVLDGLLLTGNQDFAKEILRLQSRCGRLP 445
>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Glycine max]
Length = 525
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 77/321 (23%), Positives = 158/321 (49%), Gaps = 6/321 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ + K + +E +ME+ G+R +N+++ C + + EA + ++
Sbjct: 167 LINGLCKMGKTRDAIELLRKMEKG---GVRP-NLIMYNMVVDGLCKEGLVTEACGLCSEM 222
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLR-GFRPSVVTYNIRIDGYCKKGC 262
+ + + T N L+ GF +G +EMV++ RP V T+NI +D CK G
Sbjct: 223 VGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGM 282
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
+A +F M + P + + L++G L + +A+++FD M +R P++ +Y+
Sbjct: 283 VAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYST 342
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I+ + + ++ A+ L+ EM ++ + D VTY+ + GL KS + L + M
Sbjct: 343 LINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASG 402
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P T +L+ + +D L L+ +++D G P+ ++L+ GLC GR + A
Sbjct: 403 QAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAK 462
Query: 443 ECSKQMLVRRRQVSEASYRML 463
E + + V+ + + +Y ++
Sbjct: 463 EIFQLLSVKGCRPNIRTYNIM 483
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 64/254 (25%), Positives = 123/254 (48%), Gaps = 2/254 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR--FAPNNKTMNILLLGFKESGDVTAMEMFYHEM 238
+N L+ FC + + A + +++ + P+ T NIL+ + G V + M
Sbjct: 234 YNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLM 293
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ RG P VV+ N ++G+C +GC +A +F+ M LP++ + +TLI+G V+ +
Sbjct: 294 IKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMV 353
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +L EM +RNL PD YN ++ L + + +L++ M D +TY+ +
Sbjct: 354 DEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVL 413
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
+K L+ L+ +++ P RT +L+ C R+ ++ L +G
Sbjct: 414 LDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGC 473
Query: 419 CPHGHALDLLVTGL 432
P+ ++++ GL
Sbjct: 474 RPNIRTYNIMINGL 487
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/362 (22%), Positives = 155/362 (42%), Gaps = 16/362 (4%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSY 155
H H P+ + K L + + +++ L SH+ +L ++SI ++ ++
Sbjct: 48 HLHPPPSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQM 107
Query: 156 EETLEAFDRMEREIFVGIRKFGSEEFNV--LLQAFCTQKEMKEARSVFVKLLSR-FAPNN 212
++ + R FG + F + L++ C + EA +++ +S+ F+ +
Sbjct: 108 GLAFSVMAKIVK------RGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDE 161
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
L+ G + G +M G RP+++ YN+ +DG CK+G +A L E
Sbjct: 162 VCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSE 221
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP-KRNLKPDIGAYNAMISSLIRCR 331
M + T +LIHG A +L +EM K +++PD+ +N ++ +L +
Sbjct: 222 MVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLG 281
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A + M ++ + D V+ + + G + +++DRM+E +P +
Sbjct: 282 MVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYS 341
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGR----WE--EAFECS 445
L+ +C VD L L + R P + L+ GL GR W+ EA S
Sbjct: 342 TLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRAS 401
Query: 446 KQ 447
Q
Sbjct: 402 GQ 403
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/353 (23%), Positives = 139/353 (39%), Gaps = 41/353 (11%)
Query: 113 LARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVG 172
L + FD A + HP ++ S++ +LS I K + Y + ++ + G
Sbjct: 30 LPKTPTFDDAVSTFHRMLHLHPPP-SIVSLNKLLSSIMKTKHYPTVVSLCSHLDSK---G 85
Query: 173 IRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAM 231
K ++ + + +M A SV K++ R F + T+ L+ G G
Sbjct: 86 TPKPSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEA 145
Query: 232 EMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG 291
Y V +GF V Y I+G CK G DA+ L +ME
Sbjct: 146 LNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKME----------------- 188
Query: 292 AGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHD 351
K ++P++ YN ++ L + + A L EM K I D
Sbjct: 189 ------------------KGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICID 230
Query: 352 NVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLW 410
TY+++ G + +G +L + M+ + V P T +L+ C V N++
Sbjct: 231 VFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVF 290
Query: 411 GYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
G +I RG P + + L+ G C RG EA E +M+ R + + SY L
Sbjct: 291 GLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTL 343
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 7/176 (3%)
Query: 156 EETLEAFDRM-EREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
E E FDRM ER + + + L+ +C K + EA + ++ R P+
Sbjct: 319 SEAKEVFDRMVERGKLPNVISYST-----LINGYCKVKMVDEALRLLTEMHQRNLVPDTV 373
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N LL G +SG V M G P ++TYN+ +D Y K+ C A+ LF+ +
Sbjct: 374 TYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHI 433
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIR 329
P+++T LI G + A+++F + + +P+I YN MI+ L R
Sbjct: 434 VDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRR 489
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 104/245 (42%), Gaps = 36/245 (14%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L+ A C + EAR+VF ++ R P+ + N L+ G+ G ++ + + MV
Sbjct: 270 FNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMV 329
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHG---AGLV- 295
RG P+V++Y+ I+GYCK +A+RL EM + +P T L+ G +G V
Sbjct: 330 ERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVL 389
Query: 296 -------------------------------RNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
+ +A LF + + P+I YN +I
Sbjct: 390 YEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILI 449
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + + AA E+ + K + TY+ M GL + L+ L M++ F
Sbjct: 450 DGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFP 509
Query: 385 PKTRT 389
P T
Sbjct: 510 PNAVT 514
>gi|255660894|gb|ACU25616.1| pentatricopeptide repeat-containing protein [Glandularia flava]
Length = 481
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 186/446 (41%), Gaps = 52/446 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FF++ + F + K + IL R + A ++ + + L + M +M
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK--GLEWDEDMWVM 85
Query: 146 -LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ K +E+++ F +ME +G+ + + +N L + + A+ F K+
Sbjct: 86 MIDSYGKQGIVQESVKMFQKMEE---LGVER-TIKSYNALFKVILRRGRYMMAKRYFNKM 141
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
LS P T N+++ GF SG V F+ +M R P VVTYN I+GY +
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKM 201
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + F EM+ P++ T TTLI G V + A +L +EM +KP+ Y+ +
Sbjct: 202 EEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTL 261
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L ++ A ++ EM +K + DN + + KS L+ + MI
Sbjct: 262 LPGLCNAEKMSEARVILKEMMDKYLAPTDNSIFMRLISSHCKSGNLDAAADVLKAMIRLS 321
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG----------------------FCP 420
+ +L++ FC + D + L LI++ C
Sbjct: 322 VPTEAGHYGVLIENFCKVGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPXIEYLCN 381
Query: 421 HGH--------------------ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+G AL+ L+ G G + AFE K ML R+ +++Y
Sbjct: 382 NGQAXKAETLVRQLXKLGVQDPTALNTLIRGXSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++Q YL + + LD MI+N
Sbjct: 442 NSLVQSYLKKNEPXDAKAALDSMIEN 467
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 41/230 (17%), Positives = 101/230 (43%), Gaps = 4/230 (1%)
Query: 266 AMRLFEEMERVACLP-SLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
A++ F +ER + +T +I G ++ AR + +MPK+ L+ D + MI
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKKGLEWDEDMWVMMI 87
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
S + + ++++ +MEE + +Y+ +F +++ + +++M+
Sbjct: 88 DSYGKQGIVQESVKMFQKMEELGVERTIKSYNALFKVILRRGRYMMAKRYFNKMLSEGIE 147
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P T +++ F ++ +V+ + + R P + ++ G + EEA +
Sbjct: 148 PTRHTFNVMIWGFFLSGKVETXNRFFEDMKSREISPDVVTYNTMINGYYRVKKMEEAEKY 207
Query: 445 SKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLPPPT 494
+M R + + +Y L + V ++++D R+++ ++ P
Sbjct: 208 FVEMKGRNIEPTVVTYTTLIKGYVSV---DQVDDALRLVEEMKGFGIKPN 254
>gi|255660896|gb|ACU25617.1| pentatricopeptide repeat-containing protein [Glandularia subincana]
Length = 484
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 186/446 (41%), Gaps = 52/446 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
AL+FF++ + F + K + IL R + A ++ + + L + M +M
Sbjct: 28 ALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILLDMPKK--GLEWDEDMWVM 85
Query: 146 -LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+ K +E+++ F +ME +G+ + + +N L + + A+ F K+
Sbjct: 86 MIDSYGKEGIVQESVKMFQKMEE---LGVER-TIKSYNALFKVILRRGRYMMAKRYFNKM 141
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
LS P T N+++ GF SG V F+ +M R P VVTYN I+GY +
Sbjct: 142 LSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPDVVTYNTMINGYYRVKKM 201
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
+A + F EM+ P++ T TTLI G V + A +L +EM +KP+ Y+ +
Sbjct: 202 EEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQVDDALRLVEEMKGFGIKPNAITYSTL 261
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+ L ++ A ++ EM +K + DN + + KS L+ + MI
Sbjct: 262 LPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFMRLISSHCKSGNLDAAADVLKAMIRLS 321
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG----------------------FCP 420
+ +L++ FC + D + L LI++ C
Sbjct: 322 VPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEKDIILRPQSTLHLEPSAYNPMIEYLCN 381
Query: 421 HGH--------------------ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASY 460
+G AL+ L+ G G + AFE K ML R+ +++Y
Sbjct: 382 NGQAXKAETLVRQLXKLGVQDPTALNTLIRGHSQEGSPDSAFELLKIMLRRKVDSEKSAY 441
Query: 461 R-MLQRYLVQANANEKLEDLDRMIKN 485
++Q YL + + LD MI+N
Sbjct: 442 NSLVQSYLKKNEPXDAKAALDSMIEN 467
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/288 (22%), Positives = 126/288 (43%), Gaps = 9/288 (3%)
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
K+ N L G + ++++M+ G P+ T+N+ I G+ G A R FE+
Sbjct: 116 KSYNALFKVILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFED 175
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRD 332
M+ P + T T+I+G V+ + +A + F EM RN++P + Y +I +
Sbjct: 176 MKSREISPDVVTYNTMINGYYRVKKMEEAEKYFVEMKGRNIEPTVVTYTTLIKGYVSVDQ 235
Query: 333 LNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVM 392
++ A+ L++EM+ I + +TY T+ GL + + + M++ P + M
Sbjct: 236 VDDALRLVEEMKGFGIKPNAITYSTLLPGLCNAEKMSEARVILKEMMDKYLAPTDNXIFM 295
Query: 393 -LMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE-----CSK 446
L+ C + +D ++ +I +L+ C G++++A + K
Sbjct: 296 RLISSHCKSGNLDAAADVLKAMIRLSVPTEAGHYGVLIENFCKXGQYDKAVKLLDKLIEK 355
Query: 447 QMLVRRR---QVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVLP 491
+++R + + ++Y + YL K E L R + L P
Sbjct: 356 DIILRPQSTLHLEPSAYNPMIEYLCNNGQAXKAETLVRQLXKLGVQDP 403
>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
Length = 987
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/316 (26%), Positives = 137/316 (43%), Gaps = 33/316 (10%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++VLLQA C QK++ EA S+ ++ +S N I++ + G + ++EM+
Sbjct: 633 YSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMI 692
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G +PS TY + I YCK G +A L EMER P + T I+G G + I
Sbjct: 693 SSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYID 752
Query: 300 QARQLFDEMPKRNLKPD----------------IGAYNAMISSLIRCRDLNAAMELMDEM 343
+A M + +P+ I A+ S + +LN +L++ M
Sbjct: 753 RAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERM 812
Query: 344 EEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFC----- 398
+ + VTY ++ G K++ LE C L D M+ P ML+K C
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLF 872
Query: 399 ---VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
V+F D +I+ GF P + L+ GLC G ++ A +L
Sbjct: 873 GKAVSFVTD--------MIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNH 924
Query: 456 SEASYRMLQRYLVQAN 471
+E ++++L L++A
Sbjct: 925 NEVAWKILNDGLLKAG 940
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 161/386 (41%), Gaps = 28/386 (7%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRY---FD-----------------QAWEL 125
AL FF+ + P F T + L +LAR R +D +A +
Sbjct: 69 ALAFFECVARRPGFRHTAASHAALLQLLARRRAPANYDKLVLSMISCSGTAEDVREAVDA 128
Query: 126 MSHVQRTHPSLLTL--KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNV 183
+ ++R L L K ++ L + +F E + + + +E + + +N
Sbjct: 129 IQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLP----DTVTYNT 184
Query: 184 LLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRG 242
++ A+C + + A F L S + T N LLLG+ + D+ M L G
Sbjct: 185 MIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMG 244
Query: 243 FRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
R + +Y I I G C+ C +A+ L M C +L T T LI G IH AR
Sbjct: 245 CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDAR 304
Query: 303 QLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGL 362
L DEMP R + P + YNAMI + + A+ + ME+ D+ TY+++ +GL
Sbjct: 305 GLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL 364
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
L+ +L + I F P T L+ +C R+D L + +I
Sbjct: 365 CGGK-LDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDL 423
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQM 448
A +L+ L + R +EA E +M
Sbjct: 424 QAYGVLINVLIKKCRLKEAKETLNEM 449
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 129/300 (43%), Gaps = 4/300 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNN-KTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ +C + + +A V ++S + + +L+ + + + +EM
Sbjct: 391 FTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMF 450
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P+VVTY IDGYCK G G A+ +F+ ME C P+ T +LI+G + +H
Sbjct: 451 ANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLH 510
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A L +M + + P + Y +I + + + A L + ME+ + D Y+ +
Sbjct: 511 KAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLT 570
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L KS E + Y ++ V T L+ F D L +++ G
Sbjct: 571 DALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCK 627
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
+ +L+ LC + + EA QM V + + +Y ++ +++ ++ + L
Sbjct: 628 ADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSL 687
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 86/405 (21%), Positives = 161/405 (39%), Gaps = 40/405 (9%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
FTPT F ++ + D A + S++ ++ L L++ ++++ + K +E
Sbjct: 384 FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKL-DLQAYGVLINVLIKKCRLKEA 442
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKTMN 216
E + E+F + ++ +C + A VF KL+ PN T
Sbjct: 443 KETLN----EMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVF-KLMEHEGCHPNAWTYG 497
Query: 217 ILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + + +M G P V+TY I G CKK F +A RLFE ME+
Sbjct: 498 SLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQN 557
Query: 277 ACLPSLQ--------------------------------TITTLIHGAGLVRNIHQARQL 304
P Q T T+L+ G N A L
Sbjct: 558 GLTPDEQAYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVL 617
Query: 305 FDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMK 364
++M K D+ Y+ ++ +L + + LN A+ ++D+M + + V Y + ++K
Sbjct: 618 IEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIK 677
Query: 365 SSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHA 424
+ L++ MI P T + + +C R++ +L G + G P
Sbjct: 678 EGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVT 737
Query: 425 LDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
++ + G G + AF K+M+ + + +Y +L ++ ++
Sbjct: 738 YNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLK 782
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 78/339 (23%), Positives = 136/339 (40%), Gaps = 41/339 (12%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ +C MK+A + + P++ T N L+ G G + E + +
Sbjct: 322 YNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-GGKLDEAEELLNGAI 380
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVAC--------------------- 278
RGF P+V+T+ I+GYCK DA+R+ M C
Sbjct: 381 ARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLK 440
Query: 279 --------------LPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
P++ T T++I G V + A ++F M P+ Y ++I
Sbjct: 441 EAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLI 500
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
LI+ + L+ AM L+ +M+E I +TY T+ G K + +L++ M +
Sbjct: 501 YGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLT 560
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFEC 444
P + +L C + R + + +L+ +G LV G G + A
Sbjct: 561 PDEQAYNVLTDALCKSGRAE---EAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVL 617
Query: 445 SKQMLVRRRQVSEASYR-MLQRYLVQANANEKLEDLDRM 482
++M+ + +Y +LQ Q NE L LD+M
Sbjct: 618 IEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQM 656
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 55/251 (21%), Positives = 97/251 (38%), Gaps = 31/251 (12%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMERE------IFVGIRKFGSEEFNVLLQAFCTQKEM 194
+ ++ +S K EE MER+ + I G + +AF T K M
Sbjct: 702 TYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRM 761
Query: 195 KEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTA-------------MEMFYH---EM 238
+A PN T +LL F + + A + M + M
Sbjct: 762 VDASC---------EPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERM 812
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+ G P+VVTY+ I G+CK +A L + M P+ + T LI ++
Sbjct: 813 MKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLF 872
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
+A +M + +P + +Y+ +I L D + A L ++ H+ V + +
Sbjct: 873 GKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKIL 932
Query: 359 FFGLMKSSGLE 369
GL+K+ ++
Sbjct: 933 NDGLLKAGHVD 943
>gi|255660856|gb|ACU25597.1| pentatricopeptide repeat-containing protein [Bouchea fluminensis]
Length = 418
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 93/320 (29%), Positives = 142/320 (44%), Gaps = 19/320 (5%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV-QRTHPSLLTLKSMSI 144
A++ F+ T +H + P D K L L ++RYF W + + +P +L +I
Sbjct: 85 AIQCFRLTKKHKIWVPF-DTCRKVLEHLMKLRYFRLVWGFYKEILECGYPP--SLYFFNI 141
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEA-RS 199
++ R K E R+ + +F I K+ FN L+ + ++ E R
Sbjct: 142 LMHRFCK--------EGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYIRLGDLDEGFRL 193
Query: 200 VFVKLLSRFAPNNKTMNILLLGF-KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYC 258
+ P+ T ++L+ G KES A EM +EM+ G P+ VT+ IDG+C
Sbjct: 194 KSAMHATGVQPDVYTYSVLINGLCKESKMDEANEML-NEMLDNGLVPNGVTFTTLIDGHC 252
Query: 259 KKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIG 318
K G AM ++++M LP L T TLI+G ++ QAR L +EM + LKPD
Sbjct: 253 KNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCRRGDLGQARDLVEEMIMKGLKPDKI 312
Query: 319 AYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRM 378
Y +I + DL EL M + I D VTY + GL + K+ M
Sbjct: 313 TYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREGRAGDAEKMLREM 372
Query: 379 IEGKFVPKTRTVVMLMKFFC 398
+ P T M+M FC
Sbjct: 373 LTVGLKPDNGTYTMIMNEFC 392
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 130/262 (49%), Gaps = 7/262 (2%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E++ G+ PS+ +NI + +CK+G A +F+ + + + PS+ + TL++G
Sbjct: 123 FYKEILECGYPPSLYFFNILMHRFCKEGEMRLAQMVFDAITKWSLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ Y+ +I+ L + ++ A E+++EM + + + V
Sbjct: 183 RLGDLDEGFRLKSAMHATGVQPDVYTYSVLINGLCKESKMDEANEMLNEMLDNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGL--NLWG 411
T+ T+ G K+ ++ ++Y +M+ F+P T L+ C R DLG +L
Sbjct: 243 TFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNTLIYGLCR--RGDLGQARDLVE 300
Query: 412 YLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQAN 471
+I +G P L+ G C G E FE K+M+ ++ E +Y L L +
Sbjct: 301 EMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIRENIRLDEVTYTALISGLCREG 360
Query: 472 ANEKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + V P
Sbjct: 361 ---RAGDAEKMLREMLTVGLKP 379
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/255 (21%), Positives = 100/255 (39%), Gaps = 45/255 (17%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ R+ D+ + L S H P + T S++++ + K +E
Sbjct: 169 PSVVSFNTLMNGYIRLGDLDEGFRLKSAMHATGVQPDVYTY---SVLINGLCKESKMDEA 225
Query: 159 LEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNI 217
E + M V F L+ C ++ A ++ ++LS+ F P+ T N
Sbjct: 226 NEMLNEMLDNGLVP----NGVTFTTLIDGHCKNGKVDLAMEIYKQMLSQGFLPDLITYNT 281
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY--------------------------N 251
L+ G GD+ EM+++G +P +TY N
Sbjct: 282 LIYGLCRRGDLGQARDLVEEMIMKGLKPDKITYTTLIDGSCKEGDLEITFELRKRMIREN 341
Query: 252 IRID---------GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQAR 302
IR+D G C++G GDA ++ EM V P T T +++ ++ A
Sbjct: 342 IRLDEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTYTMIMNEFCKTGDVKTAS 401
Query: 303 QLFDEMPKRNLKPDI 317
+L EM + P +
Sbjct: 402 KLLREMQRNGPVPGV 416
Score = 39.3 bits (90), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 12/154 (7%)
Query: 134 PSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKE 193
P L+T ++ L R +A D +E I G++ + L+ C + +
Sbjct: 274 PDLITYNTLIYGLCRRGDLG------QARDLVEEMIMKGLKP-DKITYTTLIDGSCKEGD 326
Query: 194 MK---EARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTY 250
++ E R ++ R + T L+ G G E EM+ G +P TY
Sbjct: 327 LEITFELRKRMIRENIRL--DEVTYTALISGLCREGRAGDAEKMLREMLTVGLKPDNGTY 384
Query: 251 NIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
+ ++ +CK G A +L EM+R +P + T
Sbjct: 385 TMIMNEFCKTGDVKTASKLLREMQRNGPVPGVVT 418
>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 988
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/414 (23%), Positives = 172/414 (41%), Gaps = 50/414 (12%)
Query: 84 LKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT----------- 132
L AL FF++ + P+F + AF L ILA+ + A+ +M
Sbjct: 66 LTALRFFRWVEKQPNFHRSETAFVAILDILAKNGFMKPAYWVMEKAIEVKVDGGVLDVLV 125
Query: 133 -----HPSLLTLKSMSIMLSRISKFQSYEETLEAFDRM-EREIFVGIRKFGS-------- 178
S +++K + +++ +K E+ L F +M + +R
Sbjct: 126 GIGCGRNSEVSVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDK 185
Query: 179 ------EE----------------FNVLLQAFCTQKEMKEARSVFVKLLSRFA--PNNKT 214
EE FN ++ + C + E+ A V + ++ F PN+ +
Sbjct: 186 SMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEV-LDVMRMFGCDPNDVS 244
Query: 215 MNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N+L+ G G+ + +M + G + S TYN I G+CKK F +A L EM
Sbjct: 245 YNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREML 304
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
LP++ T T+++ + + AR+ D M +L PD+ +YN +I R +
Sbjct: 305 GRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFA 364
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A+ L E+ K + VTY+T+ G ++ L+ + D MI+ P T +L+
Sbjct: 365 EALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ FC + + L+ ++ RG P A + G G +AF ++M
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEM 478
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/368 (22%), Positives = 152/368 (41%), Gaps = 6/368 (1%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLE 160
PT + ++ L R+ A + V + L S + ++ S+ ++ E L
Sbjct: 310 PTVVTYNTIMYSLCRLGRVSDARRYLD-VMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368
Query: 161 AFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILL 219
F + + V +N L+ C + A+ + ++ P+ T IL+
Sbjct: 369 LFSELRSKNLVP----SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILV 424
Query: 220 LGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACL 279
GF + G++ + + EM+ RG +P + Y RI G K G A + EEM+
Sbjct: 425 RGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFP 484
Query: 280 PSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMEL 339
P L T LI+G + N A +L +M + PD Y ++I + + L A E+
Sbjct: 485 PDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEV 544
Query: 340 MDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCV 399
+M +K I VTY + L+ K +D M + P T L+ C
Sbjct: 545 FSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCK 604
Query: 400 NFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEAS 459
+D+ NL+ + +G P+ + +L+ + W++A + K ML R + +
Sbjct: 605 ENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCT 664
Query: 460 YRMLQRYL 467
+ L ++L
Sbjct: 665 HSALMKHL 672
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 89/195 (45%), Gaps = 1/195 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+NVL+ C +A + K+ L P++ T ++ SG + E + +M+
Sbjct: 490 YNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDML 549
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+G PSVVTY + I Y +G A + F+EM+ P++ T LI+G +
Sbjct: 550 KKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMD 609
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF EM + + P+ Y +I+ + A++L +M ++ I D+ T+ +
Sbjct: 610 VAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669
Query: 360 FGLMKSSGLEGVCKL 374
L K L V +L
Sbjct: 670 KHLSKDYKLLAVLRL 684
>gi|255660922|gb|ACU25630.1| pentatricopeptide repeat-containing protein [Dipyrena glaberrima]
Length = 484
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/463 (23%), Positives = 190/463 (41%), Gaps = 54/463 (11%)
Query: 68 LVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMS 127
LV NVL N AL+FF++ + F + K + IL R + A ++
Sbjct: 14 LVYNVL----HGAKNAEHALQFFRWVERSNLFEHNRETHLKIIEILGRASKLNHARCILL 69
Query: 128 HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQA 187
+ + +M+ K +E+++ F +ME +G+ + + ++ L +
Sbjct: 70 DMPKKGLEW-DXDMWVLMIDSYGKAGIVQESVKLFQKMEE---LGVER-TIKSYDALFKV 124
Query: 188 FCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPS 246
+ A+ F K+LS P T N+++ GF SG V F+ +M R P
Sbjct: 125 ILRRGRYMMAKRYFNKMLSEGIEPTRHTFNVMIWGFFLSGKVETANRFFEDMKSREISPD 184
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
V+TYN I+GY + +A + F EM+ P++ T TTLI G V + A +L +
Sbjct: 185 VITYNTMINGYYRVKKMEEAEKYFVEMKGKNIEPNVVTYTTLIKGYVSVDQVDDALRLVE 244
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG-HDNVTYHTMFFGLMKS 365
EM +KP+ Y+ ++ L ++ A ++ EM +K I DN + + K+
Sbjct: 245 EMKGYGIKPNAITYSTLLPGLCNAEKMSEARSILKEMLDKYIAPTDNSIFMRLISSQCKA 304
Query: 366 SGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG-------- 417
L+ + MI + +L++ +C + D + L LI++
Sbjct: 305 GNLDAAADVLKAMIRLSVPTEAGHYGVLIENYCKAGQYDQAVKLLDKLIEKDIILRPQST 364
Query: 418 --------------FCPHGH--------------------ALDLLVTGLCSRGRWEEAFE 443
C +G AL+ L+ G G + AFE
Sbjct: 365 LHMEPSAYNXMIEYLCNNGQXAKAETLVRQLLKLGVQDPTALNTLIRGHSREGSPDSAFE 424
Query: 444 CSKQMLVRRRQVSEASY-RMLQRYLVQANANEKLEDLDRMIKN 485
K ML R+ +++Y ++Q YL ++ + LD MI+N
Sbjct: 425 LLKIMLRRKVDSEKSAYDSLVQSYLKKSEPXDAKAALDSMIEN 467
>gi|242094080|ref|XP_002437530.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
gi|241915753|gb|EER88897.1| hypothetical protein SORBIDRAFT_10g028820 [Sorghum bicolor]
Length = 540
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 127/279 (45%), Gaps = 3/279 (1%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
+AP+ + NILL G+ + + +E + M G RP+VVTY ID YC AM
Sbjct: 180 WAPDVRVYNILLNGWSRARRLDKVEKLWAAMRDEGVRPTVVTYGTFIDAYCVMRRPDQAM 239
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
L ++M +L T +++ A ++ ++ P + P+I +N+++
Sbjct: 240 TLLDQMREEGIQANLLTCNPIVYALAQAGRFGDAHKVLEKFPLYGVSPNISTFNSLVFGY 299
Query: 328 IRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKT 387
+ DL A ++ M + I TY+ F ++ +E LY +M+ + P
Sbjct: 300 CKHGDLAGASGVLKAMLGRGISPTARTYNYFFMVFSRNRSIELGMNLYVKMVSNGYAPDQ 359
Query: 388 RTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQ 447
T +L+K C R++L L + + + GF P +L+ LC R +EEAF +Q
Sbjct: 360 FTYHLLIKMLCEANRLELTLQMLQEMRNNGFEPDQATSTMLIHLLCRRHHFEEAFAEFEQ 419
Query: 448 MLVRRRQVSEASYRMLQRYLVQ---ANANEKLEDLDRMI 483
M R +YRML + L + +KL DL R +
Sbjct: 420 MFERGIVPQYITYRMLMKELKRLGLVKLVQKLADLMRSV 458
>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
Length = 1356
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/352 (26%), Positives = 147/352 (41%), Gaps = 12/352 (3%)
Query: 96 HPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQ 153
+P P F+ + + + D A E V PS+ T +++L+ + K +
Sbjct: 156 YPLCNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTC---NMILASMVKDK 212
Query: 154 SYEETLEAFDRMEREIFVGI-RKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
E F M + GI G+ FN+L+ C + +K+A ++ ++ F P
Sbjct: 213 RTELVWSLFREMSDK---GICPNVGT--FNILINGLCVEGNLKKAGNLLKQMEENGFVPT 267
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
T N LL + + G A M+ +G V TYN+ ID C A L +
Sbjct: 268 IVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLK 327
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M + P+ T TLI+G I A Q+F+EM K +L P+ YNA+I
Sbjct: 328 KMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVG 387
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
D A+ L+D ME + + VTY T+ GL K E +L +RM V
Sbjct: 388 DFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYT 447
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
+L+ C N +D + L G + G P L+ G C G + A E
Sbjct: 448 VLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKE 499
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 132/305 (43%), Gaps = 5/305 (1%)
Query: 138 TLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEA 197
T+ + + +L+ K Y+ +E D M I GI +NV + CT +A
Sbjct: 267 TIVTYNTLLNWYCKKGRYKAAIELIDYM---ICKGIEA-DVCTYNVFIDNLCTNHRSAKA 322
Query: 198 RSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
+ K+ +PN T N L+ GF + G + ++EM P+ VTYN I G
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 382
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
+C G F +A+RL + ME + T TL++G A++L + M ++
Sbjct: 383 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVG 442
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
AY +I L + L+ A++L+ M + + D +TY ++ G + ++ ++
Sbjct: 443 HIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIIC 502
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
RM V L+ FC + V + ++ + G ++LV+ LC G
Sbjct: 503 RMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDG 562
Query: 437 RWEEA 441
+ EA
Sbjct: 563 KLGEA 567
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/348 (22%), Positives = 146/348 (41%), Gaps = 20/348 (5%)
Query: 104 DAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFD 163
+ FE +L RMR D ++ H+ T +++ + K +E ++
Sbjct: 422 EKFELAKRLLERMRVNDM---VVGHIAYT-----------VLIDGLCKNGMLDEAVQLVG 467
Query: 164 RMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGF 222
M ++ G+ ++ L+ FC +K A+ + ++ S N + L+ F
Sbjct: 468 NMYKD---GVNP-DVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNF 523
Query: 223 KESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSL 282
+ G+VT Y M G T N+ + C+ G G+A + M R+ +P+
Sbjct: 524 CQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNS 583
Query: 283 QTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDE 342
T +I+G G + + A FD+M K P Y +++ L + +L A + ++
Sbjct: 584 ITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNR 643
Query: 343 MEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFR 402
+ D+V Y+T+ KS L L+D+M++ +P + T L+ C +
Sbjct: 644 LHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGK 703
Query: 403 VDLGLNLWGYLIDRGFCPHGHAL-DLLVTGLCSRGRWEEAFECSKQML 449
+ L+G + RG H + LV GL G + AF ++M+
Sbjct: 704 AVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 751
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 106/482 (21%), Positives = 184/482 (38%), Gaps = 47/482 (9%)
Query: 5 KRLKRSDKFPGISDRLAL--LFSTTTQSSEIERIT----RIINDHPFPDQPLHPTLLQHL 58
K L R PG D + L + T +S + +++ ++ PD + +LL L
Sbjct: 639 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698
Query: 59 PQTTPLSST--LVENVLGR--LFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILA 114
+ + L +GR LF H +T D K H A
Sbjct: 699 CRKGKAVTAVCLFGTAMGRGTLFP----------------NHVMYTCLVDGLSKAGHPKA 742
Query: 115 RMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIR 174
+F+ E+M + T P + ++ SR + + F +R
Sbjct: 743 AFYFFE---EMMK--KGTCPDTVAFNAIIDSCSRRGQMMK-----------ANDFFSTMR 786
Query: 175 KFGS----EEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVT 229
+G +N+LL F ++ + S++ ++ P+ T + L+LG +SG
Sbjct: 787 WWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPD 846
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+M++ G T+NI I+ Y + G A L M + P T +
Sbjct: 847 LGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIF 906
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
+G ++ + EM + + P Y +I+ + R D+ A +L DEME G
Sbjct: 907 NGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFG 966
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
V M GL+ E + D M+ + +P T LM FC + ++ L L
Sbjct: 967 SHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKL 1026
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
G + G A ++L+ G+C+ G AFE ++M R + +Y +L +
Sbjct: 1027 KGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISA 1086
Query: 470 AN 471
AN
Sbjct: 1087 AN 1088
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 128/297 (43%), Gaps = 10/297 (3%)
Query: 197 ARSVFVKLLSRFAPNNK---TMNILLLGFKESGDVT-AMEMFYHEMV-LRGFRPSVVTYN 251
++S+F L+ + N ++L+ + + G + A+E F E+V L GF+PSV T N
Sbjct: 145 SKSIFGALMDTYPLCNSIPSVFDLLIRVYLKEGMIDYAVETF--ELVGLVGFKPSVYTCN 202
Query: 252 IRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR 311
+ + K LF EM P++ T LI+G + N+ +A L +M +
Sbjct: 203 MILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEEN 262
Query: 312 NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGV 371
P I YN +++ + AA+EL+D M K I D TY+ L +
Sbjct: 263 GFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKA 322
Query: 372 CKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTG 431
L +M + P T L+ F ++ + ++ + P+ + L+ G
Sbjct: 323 YLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGG 382
Query: 432 LCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQA 488
C G +EEA M +++E +Y L L + +EK E R+++ ++
Sbjct: 383 HCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCK---HEKFELAKRLLERMRV 436
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 57/141 (40%), Gaps = 3/141 (2%)
Query: 176 FGSEEF--NVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAME 232
FGS E + +++ + ++A V +L R P T L+ F +
Sbjct: 965 FGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEAL 1024
Query: 233 MFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGA 292
M L G + VV YN+ I G C G A L+EEM P++ T L+
Sbjct: 1025 KLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAI 1084
Query: 293 GLVRNIHQARQLFDEMPKRNL 313
N+ Q +L ++ +R L
Sbjct: 1085 SAANNLIQGEKLLTDLQERGL 1105
>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g62910-like [Cucumis sativus]
Length = 588
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/353 (25%), Positives = 161/353 (45%), Gaps = 26/353 (7%)
Query: 105 AFEKTLHILARMRYFDQAWELMS--HVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAF 162
+F + L LA++ ++ Q + L H+ P LLTL +I+++ + E L A
Sbjct: 93 SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTL---NILINCLCNVNRINEGLAAM 149
Query: 163 DRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLG 221
+ R ++ F L++ C + + EA +F+++ PN T L+ G
Sbjct: 150 AGIMRRGYIP----DVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKG 205
Query: 222 FKESGDVTAMEMFYHEMV------LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
G++ ++ EM+ + RP+V++Y+I IDG CK G + +A+ LF EM
Sbjct: 206 LCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVD 265
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
P++ T + LI + +A++L + M + + P++ Y ++I DLN+
Sbjct: 266 QGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNS 325
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A EL M K D ++Y+ + G K+ +E KL++ M+ P +T +L+K
Sbjct: 326 AKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLK 385
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVT-----GLCSRGRWEEAFE 443
+ +VD L+ R P+ DL + GLC G EA +
Sbjct: 386 ALFLAGKVDDAKELF-----RVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMK 433
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 159/350 (45%), Gaps = 40/350 (11%)
Query: 141 SMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV 200
S SI++ + K ++EE + F+ M + G++ F+VL+ C + ++ +A+ +
Sbjct: 239 SYSIIIDGLCKVGNWEEAICLFNEMVDQ---GVQP-NVVTFSVLIDMLCKEGQVIKAKKL 294
Query: 201 FVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ PN T L+ GF GD+ + + + M +G+ P V++YN+ I+GYCK
Sbjct: 295 LEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCK 354
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGA--------------------------- 292
+AM+LF EM V P ++T L+
Sbjct: 355 TLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCI 414
Query: 293 ------GLVRN--IHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
GL +N I +A +LF+E+ N+K DI + +I L + L A EL +++
Sbjct: 415 CCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLY 474
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
E+ I D + Y +M G K ++ L+ +M E P T +LM+ F + +++
Sbjct: 475 EEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLE 534
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+ L +I++ P ++ +C +++E + ++ V++ +
Sbjct: 535 KVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFVQKHR 584
Score = 99.4 bits (246), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 85/338 (25%), Positives = 154/338 (45%), Gaps = 16/338 (4%)
Query: 154 SYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNN 212
S + + FD M R IF FN LL + + S++ ++ L+ P+
Sbjct: 76 SVTQAHQFFDLMMRSIF---------SFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDL 126
Query: 213 KTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE 272
T+NIL+ + ++ RG+ P VVT+ I G C + +A +LF
Sbjct: 127 LTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMR 186
Query: 273 MERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKR------NLKPDIGAYNAMISS 326
M+++ C P++ T TLI G + NI+ A + EM N +P++ +Y+ +I
Sbjct: 187 MQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDG 246
Query: 327 LIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPK 386
L + + A+ L +EM ++ + + VT+ + L K + KL + MI+ VP
Sbjct: 247 LCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306
Query: 387 TRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSK 446
T L+K FC+ ++ L+ + +G+ P + ++L+ G C + EEA +
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366
Query: 447 QMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIK 484
+ML + +L + L A + ++L R+IK
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIK 404
>gi|334183626|ref|NP_176639.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|122242336|sp|Q0WKZ3.1|PP105_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64580
gi|110741328|dbj|BAF02214.1| hypothetical protein [Arabidopsis thaliana]
gi|332196134|gb|AEE34255.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
Length = 523
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 137/305 (44%), Gaps = 5/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+++ + K + LE F ME++ GIR + +N L+ +A + +
Sbjct: 190 VINGLCKNRDLNNALEVFYCMEKK---GIRA-DAVTYNTLISGLSNSGRWTDAARLLRDM 245
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
+ R PN L+ F + G++ Y EM+ R P+V TYN I+G+C GC
Sbjct: 246 VKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCL 305
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
GDA +F+ M C P + T TLI G + + +LF EM + L D YN +
Sbjct: 306 GDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTL 365
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
I + LN A ++ + M + + D VTY+ + L + +E + + + + +
Sbjct: 366 IHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEM 425
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T ++++ C ++ L+ L +G P A +++GLC +G EA +
Sbjct: 426 DVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADK 485
Query: 444 CSKQM 448
++M
Sbjct: 486 LCRRM 490
Score = 108 bits (270), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 99/377 (26%), Positives = 169/377 (44%), Gaps = 16/377 (4%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWEL---MSHVQRTHPSLLTLKSMSIMLSRISKFQSYEE 157
P+ F + L ++A+M FD L M ++ +H L S +I++ +
Sbjct: 77 PSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHD----LYSFTILIHCFCRCSRLSL 132
Query: 158 TLEAFDRMEREIF-VGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTM 215
L +M + F I GS LL FC +EA S+ + F PN
Sbjct: 133 ALALLGKMMKLGFRPSIVTLGS-----LLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIY 187
Query: 216 NILLLGFKESGDVT-AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEME 274
N ++ G ++ D+ A+E+FY M +G R VTYN I G G + DA RL +M
Sbjct: 188 NTVINGLCKNRDLNNALEVFYC-MEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 275 RVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLN 334
+ P++ T LI N+ +AR L+ EM +R++ P++ YN++I+ L
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLG 306
Query: 335 AAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLM 394
A + D M K D VTY+T+ G KS +E KL+ M V T L+
Sbjct: 307 DAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLI 366
Query: 395 KFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQ 454
+C ++++ ++ ++D G P ++L+ LC+ G+ E+A + +
Sbjct: 367 HGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD 426
Query: 455 VSEASYRMLQRYLVQAN 471
V +Y ++ + L + +
Sbjct: 427 VDIITYNIIIQGLCRTD 443
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/190 (22%), Positives = 81/190 (42%)
Query: 263 FGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNA 322
F DA LF EM + +PS+ T ++ + L+ +M + D+ ++
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
+I RC L+ A+ L+ +M + VT ++ G + + + L D M
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFG 179
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
FVP ++ C N ++ L ++ + +G + L++GL + GRW +A
Sbjct: 180 FVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAA 239
Query: 443 ECSKQMLVRR 452
+ M+ R+
Sbjct: 240 RLLRDMVKRK 249
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 1/102 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N+LL C ++++A + L S + T NI++ G + + + +
Sbjct: 397 YNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLT 456
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+G +P + Y I G C+KG +A +L M+ +PS
Sbjct: 457 RKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPS 498
>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
Length = 1152
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 123/272 (45%), Gaps = 4/272 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVL 240
+N+ + A C + +AR + L S AP+ + N L+ G+ + G + + ++
Sbjct: 383 YNIYICALCDFGRIDDAREL---LSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRA 439
Query: 241 RGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQ 300
PS+VTYN IDG C+ G A RL EEM P + T TTL+ G N+
Sbjct: 440 GDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSM 499
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEM-EEKRIGHDNVTYHTMF 359
A +++DEM ++ +KPD AY +R D + A L +EM D Y+
Sbjct: 500 ATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRI 559
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL K L + ++ VP T +++ + N + + NL+ ++ +
Sbjct: 560 DGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 619
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
P +L+ G GR E+AF+ S +M R
Sbjct: 620 PSVITYFVLIYGHAKAGRLEQAFQYSTEMKKR 651
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 134/328 (40%), Gaps = 38/328 (11%)
Query: 156 EETLEAFDRMEREIFV-GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNK 213
E+ L +F++M R+ F+ +R N++L+ + M +A +V+ ++ P
Sbjct: 222 EKFLLSFEKMIRKGFLPSVRNC-----NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 276
Query: 214 TMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEM 273
T N +L ++GD+ ++ + EM R S VTYNI I+G+ K G +A R +M
Sbjct: 277 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 336
Query: 274 ERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDL 333
R + + LI G A + DEM + P YN I +L +
Sbjct: 337 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 396
Query: 334 NAAMELMDEMEEKRIGHDN-------------------------------VTYHTMFFGL 362
+ A EL+ M + N VTY+T+ GL
Sbjct: 397 DDARELLSSMAAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGL 456
Query: 363 MKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHG 422
+S LEG +L + M P T L+K F N + + ++ ++ +G P G
Sbjct: 457 CESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDG 516
Query: 423 HALDLLVTGLCSRGRWEEAFECSKQMLV 450
+A G G ++AF ++M+
Sbjct: 517 YAYTTRAVGELRLGDSDKAFRLHEEMVA 544
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 53/187 (28%), Positives = 88/187 (47%)
Query: 209 APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMR 268
AP+ N+ + G + G++ F ++ G P VTY I GY + G F A
Sbjct: 549 APDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARN 608
Query: 269 LFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
L++EM R PS+ T LI+G + QA Q EM KR ++P++ +NA++ +
Sbjct: 609 LYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMC 668
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ +++ A + +MEE+ I + +Y + E V KLY M++ + P
Sbjct: 669 KAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGY 728
Query: 389 TVVMLMK 395
T L K
Sbjct: 729 THRALFK 735
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 85/188 (45%), Gaps = 7/188 (3%)
Query: 181 FNVLLQAFCTQKEMKEA----RSVFVKLLSRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+NV + C + +A R +F L P++ T ++ G+ E+G Y
Sbjct: 555 YNVRIDGLCKVGNLVKAIEFQRKIFRVGL---VPDHVTYTTVIRGYLENGQFKMARNLYD 611
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM+ + PSV+TY + I G+ K G A + EM++ P++ T L++G
Sbjct: 612 EMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYGMCKAG 671
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
NI +A + +M + + P+ +Y +IS ++L EM +K I D T+
Sbjct: 672 NIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPDGYTHR 731
Query: 357 TMFFGLMK 364
+F L K
Sbjct: 732 ALFKHLEK 739
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 83/192 (43%)
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
Y KK + FE+M R LPS++ ++ R +++A +++ M + + P
Sbjct: 215 YTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPT 274
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
+ +N M+ S + DL ++ EM+ + I VTY+ + G K+ +E + +
Sbjct: 275 VITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHG 334
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M F + L++ +C D + +++ G P ++ + LC G
Sbjct: 335 DMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFG 394
Query: 437 RWEEAFECSKQM 448
R ++A E M
Sbjct: 395 RIDDARELLSSM 406
>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
mitochondrial-like [Brachypodium distachyon]
Length = 810
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 171/398 (42%), Gaps = 13/398 (3%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHV--QRTHPSLLTLKSM 142
+AL F ++ P+ + + L + D+A +L S + + P+++T +
Sbjct: 419 EALNLFD-RMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTY--I 475
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
++M I+K + ++ D M++ G+ +NVL+ C + E +
Sbjct: 476 TLMRGYIAK-KDFDNAYALLDEMKQN---GV-SCNDYTYNVLINGICMVDRVCEVDGMLK 530
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+S F P T N ++ GF ++G + + Y +M +G P+++TY IDGYC+ G
Sbjct: 531 SFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTG 590
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
C A+++ ++ R P + LI+G N+ A QL + K L P+ YN
Sbjct: 591 CSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYN 650
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
++I+ + + + M + I D TY T+ G K + +LY M+
Sbjct: 651 SLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK 710
Query: 382 KFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEA 441
++P T L C + +D L + P+ ++L+ G + +EA
Sbjct: 711 GYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEA 770
Query: 442 FECSKQMLVRRRQVSEASYRML--QRYLVQANANEKLE 477
F +ML Q + +Y +L +++L N + L
Sbjct: 771 FRLHDEMLNMGIQPDDTTYDILVSKKFLEADNCADVLN 808
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 122/305 (40%), Gaps = 6/305 (1%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
M+ + K EE L D M +K L++ +C ++E+ A ++F +
Sbjct: 268 MVDVLVKTGRMEEALRVNDEMRD----AGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 205 L-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCF 263
L P +L+ G + G +M +G PS ++ + G +
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRW 383
Query: 264 GDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAM 323
DA+ LFEEM LP + T LIH + +A LFD M K +KP I YN++
Sbjct: 384 KDAVCLFEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSL 442
Query: 324 ISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKF 383
+ + ++ A++L EM + + VTY T+ G + + L D M +
Sbjct: 443 LMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGV 502
Query: 384 VPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFE 443
T +L+ C+ RV + + GF P + ++ G G AF
Sbjct: 503 SCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFT 562
Query: 444 CSKQM 448
+QM
Sbjct: 563 VYQQM 567
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/245 (22%), Positives = 99/245 (40%), Gaps = 36/245 (14%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
+ EM G P V TYN I +C+ +A+ LF+ M++ PS+ T +L+ G
Sbjct: 389 LFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYC 447
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDN- 352
+ +A +L+ EMP KP++ Y ++ I +D + A L+DEM++ + ++
Sbjct: 448 KKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDY 507
Query: 353 ----------------------------------VTYHTMFFGLMKSSGLEGVCKLYDRM 378
+TY+++ G +K+ + +Y +M
Sbjct: 508 TYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQM 567
Query: 379 IEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRW 438
E P T + +C D+ L + + RG P A + L+ G C G
Sbjct: 568 REKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNM 627
Query: 439 EEAFE 443
A +
Sbjct: 628 SHALQ 632
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 235 YHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGL 294
Y MV RG P + + + + DA+ LF EM L+ A L
Sbjct: 145 YAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDALMS-ACL 203
Query: 295 VRNIHQ-ARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+H+ A +LFDEMP + PD Y I++L + D A+ ++ EM+E +
Sbjct: 204 KEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDF 263
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
TY TM L+K+ +E ++ D M + LM+ +C+ V LNL+
Sbjct: 264 TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKET 323
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
+ G P +L+ G G ++A+E +QM
Sbjct: 324 LKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQM 358
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/252 (21%), Positives = 109/252 (43%), Gaps = 4/252 (1%)
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
EM G + V+ + GYC + G+A+ LF+E + +P+ LI G V
Sbjct: 287 EMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVG 346
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
+A +L +M + L P + ++ L+ R A+ L +EM + + D TY+
Sbjct: 347 MTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYN 405
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ ++ L L+DRM + P T L+ +C +D + L+ +
Sbjct: 406 NLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPME 465
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
GF P+ L+ G ++ ++ A+ +M ++ +Y +L + +++
Sbjct: 466 GFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV---DRV 522
Query: 477 EDLDRMIKNLQA 488
++D M+K+ +
Sbjct: 523 CEVDGMLKSFMS 534
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 61/292 (20%), Positives = 111/292 (38%), Gaps = 45/292 (15%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVA---CLPSLQTITTLIH 290
+ EM P Y + I CK G G A+R+ EM+ V C + +T+ ++
Sbjct: 214 LFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTYRTMVDVLV 273
Query: 291 GAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGH 350
G + +A ++ DEM K D+ ++ +++ A+ L E + I
Sbjct: 274 KTG---RMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLKDGIVP 330
Query: 351 DNVTYHTMFFGL---------------MKSSGL---------------------EGVCKL 374
V Y + G M GL + VC L
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVC-L 389
Query: 375 YDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCS 434
++ M + +P T L+ + C ++ LNL+ + G P + + L+ G C
Sbjct: 390 FEEMADSG-LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCK 448
Query: 435 RGRWEEAFECSKQMLVRRRQVSEASYRMLQR-YLVQANANEKLEDLDRMIKN 485
+G +EA + +M + + + +Y L R Y+ + + + LD M +N
Sbjct: 449 KGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQN 500
>gi|356557763|ref|XP_003547180.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At5g14820, mitochondrial-like [Glycine max]
Length = 492
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 95/417 (22%), Positives = 174/417 (41%), Gaps = 56/417 (13%)
Query: 26 TTTQSSEIERITRIINDHPFPDQPLHPTLLQHLPQTTPLSSTLVENVLGRLFAAHSNGLK 85
+ +E+ER+ ++I++ D+ + L + LS LV ++L R +
Sbjct: 59 SCADPAEVERVCKVIDELFALDRNMEAVLDEC---GVRLSHDLVVDMLQRF----KHAXP 111
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A FF + + P F + + +L R R F+ ++ + LLT+++ S+
Sbjct: 112 AFRFFCWAGKRPGFDHDSRTYNCMMCVLGRTRQFETMVAMLEEMGEM--GLLTMETFSVA 169
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVK-- 203
+ ++ ++ FD M++ F K G + N LL + K KEA++VF K
Sbjct: 170 IKTFAEANQRKKAAGIFDLMKKYEF----KVGVDVINFLLDSLSAAKLGKEAQAVFEKRV 225
Query: 204 ---LLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCK 259
++ R F P+ N++L G + A ++F M + P+V +Y I I +CK
Sbjct: 226 WNEMIDRGFKPDIVAHNVMLEGLLKCKKSDAXKLF-EIMKAKCPSPNVRSYTIMIQDFCK 284
Query: 260 KGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGA 319
+ G+ + +EM C P T LI G G + + L EM KR PD G
Sbjct: 285 QKMMGEVVEYIDEMVDRECQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGT 344
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
YNA+I L + ++ D+ ++Y +M
Sbjct: 345 YNALIK-------LXTSQQMPDD----------------------------AVRIYKKMS 369
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
+ P T M+M+ + V ++G +W + +G CP ++ + + G+ +G
Sbjct: 370 QSGIKPTIHTYNMIMRSYFVTKNYEIGHAIWDXMHQKGCCPDDNSYSVYI-GMLEKG 425
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/270 (21%), Positives = 114/270 (42%), Gaps = 8/270 (2%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F +++T N ++ + M EM G ++ T+++ I + + A
Sbjct: 125 FDHDSRTYNCMMCVLGRTRQFETMVAMLEEMGEMGLL-TMETFSVAIKTFAEANQRKKAA 183
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLF-----DEMPKRNLKPDIGAYNA 322
+F+ M++ + I L+ + +A+ +F +EM R KPDI A+N
Sbjct: 184 GIFDLMKKYEFKVGVDVINFLLDSLSAAKLGKEAQAVFEKRVWNEMIDRGFKPDIVAHNV 243
Query: 323 MISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGK 382
M+ L++C+ +A +L + M+ K + +Y M K + V + D M++ +
Sbjct: 244 MLEGLLKCKKSDAX-KLFEIMKAKCPSPNVRSYTIMIQDFCKQKMMGEVVEYIDEMVDRE 302
Query: 383 FVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
P L+ F ++D+ NL + RG P G + L+ S+ ++A
Sbjct: 303 CQPDAALYTCLITGFGXKKKMDMVYNLLKEMRKRGCSPDGGTYNALIKLXTSQQMPDDAV 362
Query: 443 ECSKQMLVRRRQVSEASYRMLQR-YLVQAN 471
K+M + + +Y M+ R Y V N
Sbjct: 363 RIYKKMSQSGIKPTIHTYNMIMRSYFVTKN 392
>gi|255660820|gb|ACU25579.1| pentatricopeptide repeat-containing protein [Mulguraea
asparagoides]
Length = 418
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/352 (25%), Positives = 146/352 (41%), Gaps = 42/352 (11%)
Query: 86 ALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIM 145
A+E ++ T +H P D K + L +++YF W
Sbjct: 85 AIECYRLTKEHKFRVPF-DTCRKVIEHLMKLKYFKLVWGF-------------------- 123
Query: 146 LSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLL 205
YEE+LE ++ FN+L+ FC + E++ A+SVF +
Sbjct: 124 ---------YEESLEC--GYPASLYF---------FNILMHNFCKEGEIRLAQSVFDSIT 163
Query: 206 S-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFG 264
P+ + N L+ G+ + GD+ M G +P V T+++ I+G CK+
Sbjct: 164 KWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMD 223
Query: 265 DAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMI 324
DA LF+EM +P+ T TTLI G + A +++ +M ++L PD+ YN +I
Sbjct: 224 DANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLI 283
Query: 325 SSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFV 384
L + DL +L+DEM K + D +TY T+ G K LE + RMI+
Sbjct: 284 YGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIR 343
Query: 385 PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
L+ C R + ++ G P +++ C +G
Sbjct: 344 LDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKG 395
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 123/260 (47%), Gaps = 3/260 (1%)
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
FY E + G+ S+ +NI + +CK+G A +F+ + + PS+ + TL++G
Sbjct: 123 FYEESLECGYPASLYFFNILMHNFCKEGEIRLAQSVFDSITKWGLRPSVVSFNTLMNGYI 182
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
+ ++ + +L M ++PD+ ++ +I+ L + ++ A EL DEM + + + V
Sbjct: 183 KIGDLDEGFRLKSVMQASGVQPDVYTHSVLINGLCKESKMDDANELFDEMLBNGLVPNGV 242
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T+ T+ G K+ ++ ++Y +M+ +P T L+ C + +L +
Sbjct: 243 TFTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITYNTLIYGLCKKGDLKQXXDLIDEM 302
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
+G P L+ G C G E AFE K+M+ ++ + +Y L L Q
Sbjct: 303 SMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIKENIRLDDXAYTALISGLCQEG-- 360
Query: 474 EKLEDLDRMIKNLQAVLPPP 493
+ D ++M++ + +V P
Sbjct: 361 -RSVDAEKMLREMLSVGLKP 379
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/313 (23%), Positives = 128/313 (40%), Gaps = 12/313 (3%)
Query: 180 EFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNI---LLLGFKESGDVTAMEMFYH 236
E L+Q ++K A +VF +L + + L+ + ESG + Y
Sbjct: 31 EAKTLIQIVVSRKGKGSASAVFAAILETKGTQRSDIYVFSGLITAYLESGFLRDAIECYR 90
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVR 296
FR T I+ K F +EE SL L+H
Sbjct: 91 LTKEHKFRVPFDTCRKVIEHLMKLKYFKLVWGFYEESLECGYPASLYFFNILMHNFCKEG 150
Query: 297 NIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYH 356
I A+ +FD + K L+P + ++N +++ I+ DL+ L M+ + D T+
Sbjct: 151 EIRLAQSVFDSITKWGLRPSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYTHS 210
Query: 357 TMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDR 416
+ GL K S ++ +L+D M++ VP T L+ C N RVDL + ++ ++ +
Sbjct: 211 VLINGLCKESKMDDANELFDEMLBNGLVPNGVTFTTLIDGHCKNGRVDLAMEIYRQMLSQ 270
Query: 417 GFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE-- 474
P + L+ GLC +G ++ + +M ++ + + +Y L+ N E
Sbjct: 271 SLLPDLITYNTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTT----LIDGNCKEGD 326
Query: 475 ---KLEDLDRMIK 484
E RMIK
Sbjct: 327 LETAFEYRKRMIK 339
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 111/259 (42%), Gaps = 14/259 (5%)
Query: 101 PTPDAFEKTLHILARMRYFDQAWELMSHVQRT--HPSLLTLKSMSIMLSRISKFQSYEET 158
P+ +F ++ ++ D+ + L S +Q + P + T S++++ + K ++
Sbjct: 169 PSVVSFNTLMNGYIKIGDLDEGFRLKSVMQASGVQPDVYT---HSVLINGLCKESKMDDA 225
Query: 159 LEAFDRMEREIFV--GIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTM 215
E FD M V G+ F L+ C + A ++ ++LS+ P+ T
Sbjct: 226 NELFDEMLBNGLVPNGVT------FTTLIDGHCKNGRVDLAMEIYRQMLSQSLLPDLITY 279
Query: 216 NILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
N L+ G + GD+ EM ++G +P +TY IDG CK+G A + M +
Sbjct: 280 NTLIYGLCKKGDLKQXXDLIDEMSMKGLKPDKITYTTLIDGNCKEGDLETAFEYRKRMIK 339
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
T LI G A ++ EM LKP+IG Y +I+ + D+
Sbjct: 340 ENIRLDDXAYTALISGLCQEGRSVDAEKMLREMLSVGLKPEIGTYTMIINEFCKKGDVWT 399
Query: 336 AMELMDEMEEKRIGHDNVT 354
+L+ EM+ + VT
Sbjct: 400 GSKLLKEMQRXGYXPNXVT 418
>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
Length = 798
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 91/379 (24%), Positives = 153/379 (40%), Gaps = 18/379 (4%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
+P + + L++ R D+A ++ + + P+ +T S+ L
Sbjct: 234 LSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSL---LHGYCSSGKPN 290
Query: 157 ETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEARSVFVKLLSR-FAPN 211
+ + F RM R+ G E +N L+ C EAR +F ++ R PN
Sbjct: 291 DAIGVFKRMCRD--------GVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342
Query: 212 NKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFE 271
+ T LL G+ G + M MV G +P +NI I Y K G DAM LF
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+M R P T ++ +V + A F + L PD + +I L
Sbjct: 403 KMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARD 462
Query: 332 DLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVV 391
+ A EL EM + I +N+ ++T+ L K + ++D M+ T
Sbjct: 463 KWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYN 522
Query: 392 MLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
L+ +C++ +VD L ++ G P+ + ++ G C GR E+AF +QM +
Sbjct: 523 TLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASK 582
Query: 452 RRQVSEASYRMLQRYLVQA 470
+Y + + L QA
Sbjct: 583 GVNPGIVTYSTILQGLFQA 601
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 137/315 (43%), Gaps = 8/315 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSRFA-PNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N ++ A + M +A V V+++ A PN T N LL G+ SG + M
Sbjct: 241 YNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMC 300
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
G P V TYN + CK G +A ++F+ M + P+ T TL+HG ++
Sbjct: 301 RDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLV 360
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+ L D M + ++PD +N +I + + ++ AM L +M + + D VTY +
Sbjct: 361 KMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVM 420
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
L ++ + R+I P L+ C + D L +I RG C
Sbjct: 421 DALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGIC 480
Query: 420 PHGHALDLLVTGLCSRG---RWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKL 476
P+ + L+ LC G R + F+ ++ V+R ++ + ++ Y + +E
Sbjct: 481 PNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNT--LIDGYCLHGKVDEAA 538
Query: 477 EDLDRMIKNLQAVLP 491
+ L+ M+ L V P
Sbjct: 539 KLLEGMV--LDGVKP 551
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 175/439 (39%), Gaps = 60/439 (13%)
Query: 63 PLSSTLVENVLGRLF--AAHSNGLKALEFFK--FTLQHPHFTPTPDAFEKTLHILARMRY 118
P +S++V+ L R AA + A+ F+ + P P + + +R+ +
Sbjct: 49 PTTSSIVD--LNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGH 106
Query: 119 FDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGS 178
D A+ + V R+ + + ++ + K + T EA D R + V
Sbjct: 107 LDLAFAALGRVIRSGWTAEAITFSPLLKALCDK----KRTSEAMDIALRRMPVLGCTPNV 162
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLL------SRFAPNNKTMNILLLGFKESGDVTAME 232
+ +LL+ C + ++A + ++ + P+ + N ++ G G ++
Sbjct: 163 FSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREG--RQLD 220
Query: 233 MFYH---EMVLRGFRPSVVTYNIRID---------------------------------- 255
YH +M+ +G P VVTYN I
Sbjct: 221 TAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLL 280
Query: 256 -GYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH--QARQLFDEMPKRN 312
GYC G DA+ +F+ M R P + T TL+ L +N +AR++FD M KR
Sbjct: 281 HGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLM--GYLCKNGRSMEARKIFDSMVKRG 338
Query: 313 LKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
KP+ Y ++ L L+D M I D+ ++ + K ++
Sbjct: 339 HKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAM 398
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
L+ +M P T T ++M C+ +VD + +G LI G P L+ GL
Sbjct: 399 LLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGL 458
Query: 433 CSRGRWEEAFECSKQMLVR 451
C+R +W++A E + +M+ R
Sbjct: 459 CARDKWDKAEELAVEMIGR 477
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 1/257 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
F L+ C + + +A + V+++ R PNN N LL + G V + + MV
Sbjct: 451 FRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMV 510
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ V+TYN IDGYC G +A +L E M P+ T T+I+G I
Sbjct: 511 RVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIE 570
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A LF +M + + P I Y+ ++ L + R AA EL M + I D TY+ +
Sbjct: 571 DAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIIL 630
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL +++ + +++ + F + RT +++ R D +L+ L+ RG
Sbjct: 631 LGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLV 690
Query: 420 PHGHALDLLVTGLCSRG 436
P+ L++ L +G
Sbjct: 691 PNVVTYWLMMKSLIEQG 707
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 149/332 (44%), Gaps = 13/332 (3%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFV 202
+I++ +K ++ + F +M R+ G+ + + +++ A C ++ +A + F
Sbjct: 382 NILIGTYTKHGKVDDAMLLFSKMRRQ---GLNP-DTVTYGIVMDALCMVGKVDDAMAQFG 437
Query: 203 KLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKG 261
+L+S P+ L+ G E EM+ RG P+ + +N ++ CK+G
Sbjct: 438 RLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEG 497
Query: 262 CFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYN 321
A +F+ M RV + T TLI G L + +A +L + M +KP+ YN
Sbjct: 498 MVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYN 557
Query: 322 AMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEG 381
MI+ + + A L +M K + VTY T+ GL ++ +LY MI+
Sbjct: 558 TMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKS 617
Query: 382 --KFVPKTRTVVMLMKFFCVNFRVDLGLNLWG--YLIDRGFCPHGHALDLLVTGLCSRGR 437
KF T +++L C N D L ++ YLID F ++++ L GR
Sbjct: 618 GIKFDIGTYNIILL--GLCQNNCTDDALRIFQNLYLID--FHLENRTFNIMIDALLKGGR 673
Query: 438 WEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
+EA + +L R + +Y ++ + L++
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIE 705
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/325 (23%), Positives = 135/325 (41%), Gaps = 8/325 (2%)
Query: 167 REIFVGIRKFG----SEEFNVLLQAFCTQKEMKEARSVFVKLL-SRFAPNNKTMNILLLG 221
R+IF + K G S + LL + T+ + + + ++ + P++ NIL+
Sbjct: 328 RKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGT 387
Query: 222 FKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPS 281
+ + G V + + +M +G P VTY I +D C G DAM F + P
Sbjct: 388 YTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPD 447
Query: 282 LQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMD 341
LIHG +A +L EM R + P+ +N +++ L + + A + D
Sbjct: 448 AVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFD 507
Query: 342 EMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNF 401
M + D +TY+T+ G ++ KL + M+ P T ++ +C N
Sbjct: 508 LMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNG 567
Query: 402 RVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR 461
R++ +L+ + +G P ++ GL R A E M+ + +Y
Sbjct: 568 RIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYN 627
Query: 462 MLQRYLVQANANEKLEDLDRMIKNL 486
++ L Q N +D R+ +NL
Sbjct: 628 IILLGLCQNNCT---DDALRIFQNL 649
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 53/116 (45%), Gaps = 1/116 (0%)
Query: 175 KFGSEEFNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEM 233
KF +N++L C +A +F L L F N+T NI++ + G +
Sbjct: 620 KFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKD 679
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ ++ RG P+VVTY + + ++G + LF +E+ C + + + L+
Sbjct: 680 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735
>gi|357455405|ref|XP_003597983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355487031|gb|AES68234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 520
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 93/382 (24%), Positives = 160/382 (41%), Gaps = 23/382 (6%)
Query: 85 KALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSI 144
+ALEFF + F + + + L IL + F Q W L+ +++ SL + +
Sbjct: 92 RALEFFNWVETKFKFQHSTETYNLVLDILGKFFEFQQCWNLIHRMRQNPHSLPNHTTFRV 151
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSV---- 200
M R ++ + F R+ F+ L+ A C K + EA+ +
Sbjct: 152 MFKRYVSAHCVQDAVNTFQRLNE-----FNLKDETSFSNLIDALCEYKHVLEAQDLVFGD 206
Query: 201 --------FVKLLSRF---APNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
V + F + N K NI+L G+ + G + F+ EM RG + +
Sbjct: 207 KKNQTLTWIVDGVDGFVASSKNTKIFNIVLRGWYKLGWWSKCWEFWDEMDRRGVEKDLHS 266
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
Y+I +D K G A++LF+EM+R + +I G+ + + + ++F EM
Sbjct: 267 YSIYMDILSKGGKPWKAVKLFKEMKRKGIQLDVVVYNIVIRAIGVSQGVDFSIRMFCEMK 326
Query: 310 KRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLE 369
L P + YN +I L A+ L+ M + V+Y F L K +
Sbjct: 327 DLGLNPTVVTYNTIIRLLCDSYRYKEALTLIRTMRRDGCSPNAVSYQCFFACLEKP---K 383
Query: 370 GVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLV 429
+ +L+D MIE P T VML+K F + L +W + + G P A + L+
Sbjct: 384 FIIELFDGMIESGVRPTMDTYVMLLKKFARWGFLRLVFLVWNRMEELGCSPDASAYNALI 443
Query: 430 TGLCSRGRWEEAFECSKQMLVR 451
L +G + A + ++ML +
Sbjct: 444 DALVEKGLIDMARKYDEEMLAK 465
>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
Length = 773
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 145/313 (46%), Gaps = 16/313 (5%)
Query: 182 NVLLQAFCTQKEMKEARSVFVKLLSRFA-----PNNKTMNILLLGF---KESGDVTAMEM 233
N++L A C Q + EA V LL + A + + N +L G K GDV E
Sbjct: 185 NLVLNAICEQGCVDEA----VGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDV---EE 237
Query: 234 FYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAG 293
EMV P++VT+N I C+ G F + +M C P ++ T+I G
Sbjct: 238 LMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGIC 297
Query: 294 LVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV 353
++ A ++ + MP LKP++ YN ++ L A EL+ EM +K D+V
Sbjct: 298 KEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDV 357
Query: 354 TYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYL 413
T++ + ++ ++ V +L ++M+ +P T ++ FC +D + L +
Sbjct: 358 TFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSM 417
Query: 414 IDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANAN 473
G P+ + +++ GLCS GRW +A E QM+ + + ++ L +L +
Sbjct: 418 SSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLV 477
Query: 474 EK-LEDLDRMIKN 485
E+ +E L +M+ N
Sbjct: 478 EQAIELLKQMLVN 490
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 90/413 (21%), Positives = 165/413 (39%), Gaps = 66/413 (15%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYEETLEAF 162
++ L L + + ELM + R P+++T ++ L R F+ E L
Sbjct: 218 SYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQM 277
Query: 163 D--------RMEREIFVGIRKFGSEE--------------------FNVLLQAFCTQKEM 194
RM I GI K G E +N +L+ C+ +
Sbjct: 278 SEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERW 337
Query: 195 KEARSVFVKLLSRFAP-NNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
KEA + ++ + P ++ T NIL+ F ++G V + +M+ G P V+TY
Sbjct: 338 KEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTV 397
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I+G+CK+G +A+ L + M C P+ + T ++ G A +L +M ++
Sbjct: 398 INGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGC 457
Query: 314 KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCK 373
P+ +N +I+ L + + A+EL+ +M D ++Y T+ GL K+ E +
Sbjct: 458 PPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALE 517
Query: 374 LYDRMIEGKFVPKT-----------------RTVVM------------------LMKFFC 398
L + M+ P T + + M ++ C
Sbjct: 518 LLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLC 577
Query: 399 VNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ D ++ + Y++ G P+ +L+ GL S G +EA E ++ R
Sbjct: 578 KRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSR 630
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/282 (21%), Positives = 115/282 (40%), Gaps = 43/282 (15%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLP--------------------SLQT 284
P+ T+ + G C +G DA+ + +EM C P S++
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168
Query: 285 ITTLIHGAG---------LVRN-------IHQARQLFDEMPKRNLKPDIGAYNAMISSLI 328
+ + H G LV N + +A L ++ + DI +YNA++ L
Sbjct: 169 LEAM-HAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLC 227
Query: 329 RCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTR 388
+ ELMDEM + VT++T+ L ++ E V ++ +M E P R
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287
Query: 389 TVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
++ C +++ + + G P+ + ++ GLCS RW+EA E +M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347
Query: 449 LVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMIKNLQAVL 490
+ + + ++ +L + Q +DR+I+ L+ +L
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGL------VDRVIELLEQML 383
>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 556
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 150/327 (45%), Gaps = 15/327 (4%)
Query: 143 SIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSE----EFNVLLQAFCTQKEMKEAR 198
+I+L K Y++ ++ D M R G +NV++ C + + +A
Sbjct: 191 TILLEATCKRSGYKQAVKLLDEM--------RDKGCAPDIVTYNVVVNGICQEGRVDDAM 242
Query: 199 SVFVKLLSRFA--PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDG 256
F+K L + PN + NI+L G + E EM +G P+VVT+N+ I
Sbjct: 243 E-FLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISF 301
Query: 257 YCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPD 316
C++G AM + +++ + C P+ + ++H + + +A + M PD
Sbjct: 302 LCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPD 361
Query: 317 IGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYD 376
I +YN ++++L R +++AA+EL+ ++++K ++Y+T+ GL K+ E +L +
Sbjct: 362 IVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLN 421
Query: 377 RMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRG 436
M+ P T + C R++ + + + D G P+ + ++ GLC R
Sbjct: 422 EMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRR 481
Query: 437 RWEEAFECSKQMLVRRRQVSEASYRML 463
A + M+ +E++Y +L
Sbjct: 482 ATHSAIDLFTYMVSNGCMPNESTYTIL 508
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 132/291 (45%), Gaps = 3/291 (1%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLG-FKESGDVTAMEMFYHEM 238
+N L++ C + A +V +L R P+ T ILL K SG A+++ EM
Sbjct: 155 YNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLL-DEM 213
Query: 239 VLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNI 298
+G P +VTYN+ ++G C++G DAM + + C P+ + ++ G
Sbjct: 214 RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERW 273
Query: 299 HQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A +L EM ++ P++ +N +IS L R + AME++D++ + ++++Y+ +
Sbjct: 274 EDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPI 333
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
K ++ + M+ P + L+ C VD + L L D+G
Sbjct: 334 LHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGC 393
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ 469
P + + ++ GL G+ EEA E +M+ + Q +Y + L +
Sbjct: 394 TPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCR 444
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/385 (21%), Positives = 157/385 (40%), Gaps = 15/385 (3%)
Query: 105 AFEKTLHILARMRYFDQAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDR 164
A L +L R ++A L+ + PS + ++ ++ E
Sbjct: 58 ASNDRLRVLVRRGDLEEAIRLVESMAGLEPS--AAGPCAALIKKLCASGRTAEARRVLAS 115
Query: 165 MEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRFAPNNKTMNILLLGFKE 224
E ++ +N ++ +C ++ AR + + P+ T N L+ G
Sbjct: 116 CEPDVM---------SYNAMVAGYCVTGQLDNARRLVAAM--PMEPDTYTYNTLIRGLCG 164
Query: 225 SGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQT 284
G +M+ RG P VVTY I ++ CK+ + A++L +EM C P + T
Sbjct: 165 RGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVT 224
Query: 285 ITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEME 344
+++G + A + +P +P+ +YN ++ L A +LM EM
Sbjct: 225 YNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMS 284
Query: 345 EKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVD 404
K + VT++ + L + +E ++ D++ + P + + ++ FC ++D
Sbjct: 285 RKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMD 344
Query: 405 LGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQ 464
+ ++ G P + + L+T LC G + A E Q+ + SY +
Sbjct: 345 RAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVI 404
Query: 465 RYLVQANANEK-LEDLDRMI-KNLQ 487
L +A E+ LE L+ M+ K LQ
Sbjct: 405 DGLTKAGKTEEALELLNEMVTKGLQ 429
>gi|357442837|ref|XP_003591696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355480744|gb|AES61947.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
Length = 543
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 144/307 (46%), Gaps = 17/307 (5%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ C K + +A ++ ++++ R +P T+N L+ G+ G EMV
Sbjct: 214 YSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFKEAFGLLREMV 273
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
L+ P V T+NI +D CK+G +A M + +P + T ++L+ G LV ++
Sbjct: 274 LKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVN 333
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
+A+ + Y+ +I+ + + ++ A+ L EM +RI D VTY+++
Sbjct: 334 KAKHV---------------YSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 378
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
GL KS + +L D M + T L+ C N VD + L + D+G
Sbjct: 379 DGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQ 438
Query: 420 PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYR-MLQRYLVQANANEKLED 478
+ ++L+ GLC +GR ++A + +L++ ++ +Y M+ ++ NE
Sbjct: 439 LDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETL 498
Query: 479 LDRMIKN 485
L +M N
Sbjct: 499 LSKMEDN 505
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 92/377 (24%), Positives = 158/377 (41%), Gaps = 55/377 (14%)
Query: 145 MLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKL 204
+LS + K + Y + F ++E F GI+ ++L+ +C +M+ A S+F K+
Sbjct: 77 ILSSLVKLKHYPTVISLFYQLE---FNGIKP-NIVSLSILINCYCHLGQMRFAFSIFAKI 132
Query: 205 LSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFR------------------- 244
L + PN T+ L+ GF + V F+ ++ GF
Sbjct: 133 LKMGYHPNTITLTTLVKGFCLNHKVKEALHFHDHVLALGFHFNQVSYGTLINGLCKIGET 192
Query: 245 ----------------PSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTL 288
VV Y+ IDG CK DA L+ EM P++ T+ +L
Sbjct: 193 RAALQMLRQIEGKLVSTDVVMYSTIIDGLCKDKLVNDAYELYSEMITKRISPTVVTLNSL 252
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I+G +V +A L EM +N+ PD+ +N ++ +L + + A + M ++ +
Sbjct: 253 IYGYCIVGQFKEAFGLLREMVLKNINPDVYTFNILVDALCKEGKIKEAKSGIAVMMKEGV 312
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
D VTY SS ++G C L + + + K V +++ FC VD L+
Sbjct: 313 MPDVVTY---------SSLMDGYC-LVNEVNKAKHVYS-----IVINGFCKIKMVDKALS 357
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLV 468
L+ + R P + L+ GLC GR A+E +M + +Y L L
Sbjct: 358 LFYEMRCRRIAPDTVTYNSLIDGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALC 417
Query: 469 QANANEKLEDLDRMIKN 485
+ + +K L + IK+
Sbjct: 418 KNHHVDKAIALVKKIKD 434
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 150/342 (43%), Gaps = 25/342 (7%)
Query: 113 LARMRYFDQAWELMSHV--QRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIF 170
L + + + A+EL S + +R P+++TL S+ + +F+ EAF + +
Sbjct: 221 LCKDKLVNDAYELYSEMITKRISPTVVTLNSLIYGYCIVGQFK------EAFGLLREMVL 274
Query: 171 VGIRKFGSEEFNVLLQAFCTQKEMKEARS-VFVKLLSRFAPNNKTMNILLLGFKESGDVT 229
I FN+L+ A C + ++KEA+S + V + P+ T + L+ G+ +V
Sbjct: 275 KNINP-DVYTFNILVDALCKEGKIKEAKSGIAVMMKEGVMPDVVTYSSLMDGYCLVNEVN 333
Query: 230 AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLI 289
+ Y+I I+G+CK A+ LF EM P T +LI
Sbjct: 334 KAKH---------------VYSIVINGFCKIKMVDKALSLFYEMRCRRIAPDTVTYNSLI 378
Query: 290 HGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIG 349
G I A +L DEM DI YN++I +L + ++ A+ L+ +++++ I
Sbjct: 379 DGLCKSGRISYAWELVDEMRDSGQPADIITYNSLIDALCKNHHVDKAIALVKKIKDQGIQ 438
Query: 350 HDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNL 409
D TY+ + GL K L+ ++ ++ + T +++ C+ ++ L
Sbjct: 439 LDMYTYNILIDGLCKQGRLKDAQVIFQDLLIKGYNLTVWTYTIMINGLCLEGLLNEAETL 498
Query: 410 WGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVR 451
+ D G P + ++ L + E A + ++M+ R
Sbjct: 499 LSKMEDNGCVPDAVTCETIIRALFENDKNERAEKLLREMIAR 540
>gi|242075962|ref|XP_002447917.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
gi|241939100|gb|EES12245.1| hypothetical protein SORBIDRAFT_06g017980 [Sorghum bicolor]
Length = 550
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 6/322 (1%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N L L A A+ F+ +Q ++P +F + + R+ F +A EL+ +
Sbjct: 186 NNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALELVERMT 245
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
S T+ + +I++ + + + + R++R+ G+ + ++ +C
Sbjct: 246 EFGCSPDTI-THNILVDGLCRAKQVNRGHDLLRRLQRD---GVCMPNVVTYTSVISGYCK 301
Query: 191 QKEMKEARSVFVKLL-SRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVT 249
M++A SV+ +L S PN T N+L+ G+ ++ D+ + Y +++LR P VVT
Sbjct: 302 AGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVT 361
Query: 250 YNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMP 309
++ IDGYC+ G DAMR+++EM + P++ T + +IH +A E+
Sbjct: 362 FSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELN 421
Query: 310 KR-NLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGL 368
R ++ P YN +I L + + A ++ +MEEK D TY + G +
Sbjct: 422 MRADIAPQTFIYNPVIDILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRI 481
Query: 369 EGVCKLYDRMIEGKFVPKTRTV 390
L+ +M+E P TV
Sbjct: 482 PEAITLFHKMVETGCRPDKITV 503
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/294 (24%), Positives = 130/294 (44%), Gaps = 5/294 (1%)
Query: 160 EAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSRF--APNNKTMNI 217
+A E I G+ FNV+++ C ++A V+ ++ F +P+ T NI
Sbjct: 200 DAVALFESWIQDGLYSPDGWSFNVVIKGVCRVGNFQKALE-LVERMTEFGCSPDTITHNI 258
Query: 218 LLLGFKESGDVTAMEMFYHEMVLRGF-RPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV 276
L+ G + V + G P+VVTY I GYCK G DA+ ++ +M
Sbjct: 259 LVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLES 318
Query: 277 ACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAA 336
P+ T LI+G G ++ A +++ ++ R PD+ ++++I RC L+ A
Sbjct: 319 GTRPNTVTYNVLINGYGKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDA 378
Query: 337 MELMDEMEEKRIGHDNVTYHTMFFGLMKSS-GLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
M + EM + I + T+ + L K + E + L + + P+T ++
Sbjct: 379 MRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVID 438
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQML 449
C +V+ + + ++G P + +L+ G C +GR EA +M+
Sbjct: 439 ILCKGGQVEEANLIVTDMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMV 492
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/310 (19%), Positives = 131/310 (42%), Gaps = 14/310 (4%)
Query: 140 KSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCTQKEMKEARS 199
+S S +++ + + + + L+ FD+M + F + CT + +A
Sbjct: 112 QSYSHVITLLCRSGRHRDALKLFDQMTDQS----GYLPDAVFFSFVAGSCTNAGLLDAAV 167
Query: 200 VFVKLLSRFA------PNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIR 253
+ S+F N +N+L+ + V E + + + + P ++N+
Sbjct: 168 TLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGL---YSPDGWSFNVV 224
Query: 254 IDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNL 313
I G C+ G F A+ L E M C P T L+ G + +++ L + + +
Sbjct: 225 IKGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGV 284
Query: 314 -KPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVC 372
P++ Y ++IS + + A+ + ++M E + VTY+ + G K+ +E
Sbjct: 285 CMPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAV 344
Query: 373 KLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGL 432
++Y ++I + P T L+ +C ++D + +W + P+ + +++ L
Sbjct: 345 RMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSL 404
Query: 433 CSRGRWEEAF 442
C + R EA
Sbjct: 405 CKQNRSAEAL 414
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/320 (20%), Positives = 136/320 (42%), Gaps = 5/320 (1%)
Query: 179 EEFNVLLQAFCTQKEMKEARSVFVKLL--SRFAPNNKTMNILLLGFKESGDVTAMEMFYH 236
+ ++ ++ C ++A +F ++ S + P+ + + +G + A
Sbjct: 112 QSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGLLDAAVTLLT 171
Query: 237 EMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEE-MERVACLPSLQTITTLIHGAGLV 295
+ G R YN ++ +G DA+ LFE ++ P + +I G V
Sbjct: 172 KASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVIKGVCRV 231
Query: 296 RNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-T 354
N +A +L + M + PD +N ++ L R + +N +L+ ++ + NV T
Sbjct: 232 GNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVCMPNVVT 291
Query: 355 YHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLI 414
Y ++ G K+ +E +Y+ M+E P T T +L+ + ++ + ++ LI
Sbjct: 292 YTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVLINGYGKALDMESAVRMYRQLI 351
Query: 415 DRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANE 474
R P L+ G C G+ ++A K+M Q + ++ ++ L + N +
Sbjct: 352 LRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNVYTFSIIIHSLCKQNRSA 411
Query: 475 KLEDLDRMIKNLQAVLPPPT 494
+ R + N++A + P T
Sbjct: 412 EALGFLREL-NMRADIAPQT 430
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/309 (22%), Positives = 122/309 (39%), Gaps = 46/309 (14%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHI--LARMRYFDQAWELMSH 128
NV+ + N KALE + + F +PD + + L R + ++ +L+
Sbjct: 222 NVVIKGVCRVGNFQKALELVE---RMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRR 278
Query: 129 VQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAF 188
+QR + + + + ++S K E+ L ++ M G R + +NVL+ +
Sbjct: 279 LQRDGVCMPNVVTYTSVISGYCKAGRMEDALSVYNDMLES---GTRP-NTVTYNVLINGY 334
Query: 189 CTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSV 247
+M+ A ++ +L L R P+ T + L+ G+ G + + EM +P+V
Sbjct: 335 GKALDMESAVRMYRQLILRRCPPDVVTFSSLIDGYCRCGQLDDAMRIWKEMGQHHIQPNV 394
Query: 248 VT------------------------------------YNIRIDGYCKKGCFGDAMRLFE 271
T YN ID CK G +A +
Sbjct: 395 YTFSIIIHSLCKQNRSAEALGFLRELNMRADIAPQTFIYNPVIDILCKGGQVEEANLIVT 454
Query: 272 EMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCR 331
+ME C P T T LI G + I +A LF +M + +PD N+ IS +++
Sbjct: 455 DMEEKGCHPDKYTYTILIIGHCMKGRIPEAITLFHKMVETGCRPDKITVNSFISCVLKAG 514
Query: 332 DLNAAMELM 340
N ++M
Sbjct: 515 MPNEVDQIM 523
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 9/225 (4%)
Query: 245 PSVVTYNIRIDGYCKKGCFGDAMRLFEEM-ERVACLPS---LQTITTLIHGAGLVRNIHQ 300
PS +Y+ I C+ G DA++LF++M ++ LP + AGL +
Sbjct: 109 PSEQSYSHVITLLCRSGRHRDALKLFDQMTDQSGYLPDAVFFSFVAGSCTNAGL---LDA 165
Query: 301 ARQLFDEMPKRNLKPDIGAYNAMISSLI-RCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A L + + + + AYN +++ LI R R +A +++ D +++ +
Sbjct: 166 AVTLLTKASQFGRRIEPYAYNNLLNLLIARGRAQDAVALFESWIQDGLYSPDGWSFNVVI 225
Query: 360 FGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFC 419
G+ + + +L +RM E P T T +L+ C +V+ G +L L G C
Sbjct: 226 KGVCRVGNFQKALELVERMTEFGCSPDTITHNILVDGLCRAKQVNRGHDLLRRLQRDGVC 285
Query: 420 -PHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRML 463
P+ +++G C GR E+A ML + + +Y +L
Sbjct: 286 MPNVVTYTSVISGYCKAGRMEDALSVYNDMLESGTRPNTVTYNVL 330
>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis]
Length = 630
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 108/497 (21%), Positives = 190/497 (38%), Gaps = 87/497 (17%)
Query: 61 TTPLSSTLVENVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFD 120
T LSS L ++ AL + + P+F P +E+ L L ++ F+
Sbjct: 45 TATLSSNFTPAQLLDTLRRQNDETAALRLLSWASKQPNFRPNSSIYEEILRKLGKVGSFN 104
Query: 121 QAWELMSHVQRTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMERE------------ 168
+++ ++ + + I + +KF+ YEE L + ME E
Sbjct: 105 SMKDILQEMKGLDCQI-DRGVLLIFIDSYAKFELYEEILCIVEVMEVEFGLALDTLLYNF 163
Query: 169 ---IFVGIRKFGSEE-----------------FNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ V K E FN+L++A C +++ A V ++ S
Sbjct: 164 LLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYG 223
Query: 208 FAPNNKTMNILLLGFKESGDVT-------------------------------------- 229
P+ KT L+ GF E G++
Sbjct: 224 LVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEAL 283
Query: 230 --------------AMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMER 275
A+E+ Y+EM +G +P TYN+ ID C +G +A+ L EME
Sbjct: 284 SFIDEMSNEGKHTMAIEL-YNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEI 342
Query: 276 VACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNA 335
C ++ T TLI G + I +A ++FD+M + L + YN +I L + R +
Sbjct: 343 SGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQE 402
Query: 336 AMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMK 395
A +LMD+M + + D TY++M + ++ + M P T L+
Sbjct: 403 AAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIG 462
Query: 396 FFCVNFRVDLGLNLWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQV 455
C RV++ L + +G HA + ++ L R R +EA ++M +
Sbjct: 463 GLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTP 522
Query: 456 SEASYRMLQRYLVQANA 472
+Y+++ R L +
Sbjct: 523 DAFTYKIVFRGLSNSGG 539
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/220 (29%), Positives = 102/220 (46%), Gaps = 2/220 (0%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKL-LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
+N L+ FC K+++EA +F ++ + + N+ T N L+ G +S V +M+
Sbjct: 352 YNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMI 411
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+ G +P TYN + +C++G A + + M C P + T TLI G +
Sbjct: 412 MEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVE 471
Query: 300 QARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMF 359
A +L + + + AYN +I +L + + AM L EMEEK D TY +F
Sbjct: 472 VASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFTYKIVF 531
Query: 360 FGLMKSSGLEG-VCKLYDRMIEGKFVPKTRTVVMLMKFFC 398
GL S G G MIE F+P+ + ML + C
Sbjct: 532 RGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLC 571
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 130/304 (42%), Gaps = 34/304 (11%)
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
F PN+ +L + G +M+ EM + I ID Y K + + +
Sbjct: 83 FRPNSSIYEEILRKLGKVGSFNSMKDILQEMKGLDCQIDRGVLLIFIDSYAKFELYEEIL 142
Query: 268 RLFEEMERVACLPSLQTI------TTLIHGAGL--VRNIHQARQLFDEMPKRNLKPDIGA 319
+ E ME L +L T+ L+ G L V N+H M + +KPD+
Sbjct: 143 CIVEVMEVEFGL-ALDTLLYNFLLNVLVDGNKLKLVENVHST------MVSKGIKPDVST 195
Query: 320 YNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSSGLEGVCKLYDRMI 379
+N +I +L + + A+ +M+EM + D T+ T+ G ++ ++G ++ ++M+
Sbjct: 196 FNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQML 255
Query: 380 EGKFVPKTRTVVMLMKFFCVNFRVD----------------LGLNLWGYLIDRGFCPHGH 423
+ TV +L+ FC R++ + + L+ + ++G P
Sbjct: 256 DAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEF 315
Query: 424 ALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDLDRMI 483
++L+ LC RG+ +EA ++M + + +Y L + N+K+E+ + +
Sbjct: 316 TYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCK---NKKIEEAEEIF 372
Query: 484 KNLQ 487
++
Sbjct: 373 DQME 376
>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
Length = 479
Score = 108 bits (271), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 133/274 (48%), Gaps = 12/274 (4%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLSR-FAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
++ ++ FC+ + EA+ + ++L R +P+ T + L+ + GD+ + + EM+
Sbjct: 190 YSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMI 249
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERV-----------ACLPSLQTITTL 288
G P+VVT N +DG C G DA+ +F+ M++ P +QT L
Sbjct: 250 SSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNIL 309
Query: 289 IHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRI 348
I G +A +L++EMP R + PD Y++MI+ L + L+ A ++ D M K
Sbjct: 310 ISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSF 369
Query: 349 GHDNVTYHTMFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLN 408
+ VT++T+ G K+ ++ +L+ M V T + L++ F ++ L+
Sbjct: 370 SPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLD 429
Query: 409 LWGYLIDRGFCPHGHALDLLVTGLCSRGRWEEAF 442
++ +I G P + ++TGL S+ ++A
Sbjct: 430 IFQEMISSGVYPDTITIRNMLTGLWSKEELKKAL 463
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 178/429 (41%), Gaps = 24/429 (5%)
Query: 71 NVLGRLFAAHSNGLKALEFFKFTLQHPHFTPTPDAFEKTLHILARMRYFDQAWELMSHVQ 130
N+L + F + S AL F L F PT F LH L +A +L Q
Sbjct: 19 NILIKCFCSCSKLPFALSTFG-KLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH--Q 75
Query: 131 RTHPSLLTLKSMSIMLSRISKFQSYEETLEAFDRMEREIFVGIRKFGSEEFNVLLQAFCT 190
P+++T ++ L R + +EA ++R + G++ + ++ C
Sbjct: 76 MCKPNVVTFTTLMNGLCREGR------VVEAVALLDRMVEDGLQP-NQITYGTIVDGMCK 128
Query: 191 QKEMKEARSVFVKL--LSRFAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVV 248
+ A ++ K+ LS P+ + ++ G + G T + + EM +G P +V
Sbjct: 129 MGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIV 188
Query: 249 TYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEM 308
TY+ I+G+C G + +A RL +EM P + T + LI+ +++ A+ L EM
Sbjct: 189 TYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEM 248
Query: 309 PKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNV-----------TYHT 357
+ P++ N ++ L L A+E+ M++ + D TY+
Sbjct: 249 ISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNI 308
Query: 358 MFFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRG 417
+ GL+ +LY+ M VP T T ++ C R+D ++ + +
Sbjct: 309 LISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKS 368
Query: 418 FCPHGHALDLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQ-ANANEKL 476
F P+ + L+TG C G ++ E +M R + +Y L R + N N L
Sbjct: 369 FSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSL 428
Query: 477 EDLDRMIKN 485
+ MI +
Sbjct: 429 DIFQEMISS 437
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 124/270 (45%), Gaps = 6/270 (2%)
Query: 181 FNVLLQAFCTQKEMKEARSVFVKLLS-RFAPNNKTMNILLLGFKESGDVTAMEMFYHEMV 239
FN+L++ FC+ ++ A S F KL F P T N LL G V+ +H+M
Sbjct: 18 FNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMC 77
Query: 240 LRGFRPSVVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIH 299
+P+VVT+ ++G C++G +A+ L + M P+ T T++ G + +
Sbjct: 78 ----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTV 133
Query: 300 QARQLFDEMPK-RNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTM 358
A L +M + ++KPD+ Y+A+I L + A L EM++K I D VTY M
Sbjct: 134 SALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCM 193
Query: 359 FFGLMKSSGLEGVCKLYDRMIEGKFVPKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGF 418
G S +L M+ K P T L+ ++ +L +I G
Sbjct: 194 INGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGV 253
Query: 419 CPHGHALDLLVTGLCSRGRWEEAFECSKQM 448
CP+ + L+ GLC G+ ++A E K M
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/257 (22%), Positives = 116/257 (45%), Gaps = 15/257 (5%)
Query: 99 FTPTPDAFEKTLHILARMRYFDQAWELMSHVQRTH--PSLLTLKSMSIMLSRISKFQSYE 156
+P F ++ L + + A +L+ + + P+++T ++ L + +
Sbjct: 218 ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTL---LDGLCDSGKLK 274
Query: 157 ETLEAFDRMEREI--------FVGIRKFGSEEFNVLLQAFCTQKEMKEARSVFVKLLSR- 207
+ LE F M++ + F G+ + +N+L+ + + EA ++ ++ R
Sbjct: 275 DALEMFKAMQKSMMDIDATHAFNGVEP-DVQTYNILISGLINEGKFLEAEELYEEMPHRG 333
Query: 208 FAPNNKTMNILLLGFKESGDVTAMEMFYHEMVLRGFRPSVVTYNIRIDGYCKKGCFGDAM 267
P+ T + ++ G + + + M + F P++VT+N I GYCK G D +
Sbjct: 334 IVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGL 393
Query: 268 RLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFDEMPKRNLKPDIGAYNAMISSL 327
LF EM R + + T TLI G V NI+ + +F EM + PD M++ L
Sbjct: 394 ELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL 453
Query: 328 IRCRDLNAAMELMDEME 344
+L A+ +++E++
Sbjct: 454 WSKEELKKALAMLEELQ 470
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 5/234 (2%)
Query: 247 VVTYNIRIDGYCKKGCFGDAMRLFEEMERVACLPSLQTITTLIHGAGLVRNIHQARQLFD 306
+ ++NI I +C A+ F ++ ++ P+L T TL+HG + + +A LF
Sbjct: 15 IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74
Query: 307 EMPKRNLKPDIGAYNAMISSLIRCRDLNAAMELMDEMEEKRIGHDNVTYHTMFFGLMKSS 366
+M KP++ + +++ L R + A+ L+D M E + + +TY T+ G+ K
Sbjct: 75 QM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130
Query: 367 GLEGVCKLYDRMIEGKFV-PKTRTVVMLMKFFCVNFRVDLGLNLWGYLIDRGFCPHGHAL 425
L +M E + P ++ + R NL+ + D+G P
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190
Query: 426 DLLVTGLCSRGRWEEAFECSKQMLVRRRQVSEASYRMLQRYLVQANANEKLEDL 479
++ G CS G+W EA ++MLVR+ ++ L LV+ +DL
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,330,580,276
Number of Sequences: 23463169
Number of extensions: 289548227
Number of successful extensions: 1014494
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5936
Number of HSP's successfully gapped in prelim test: 4558
Number of HSP's that attempted gapping in prelim test: 899067
Number of HSP's gapped (non-prelim): 53862
length of query: 500
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 353
effective length of database: 8,910,109,524
effective search space: 3145268661972
effective search space used: 3145268661972
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 79 (35.0 bits)