Query 041823
Match_columns 374
No_of_seqs 190 out of 1190
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 18:57:35 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041823.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/041823hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g22_A Hydroxycinnamoyl-COA sh 100.0 4.5E-69 1.5E-73 531.3 33.2 349 1-365 40-434 (439)
2 2bgh_A Vinorine synthase; VS, 100.0 1.4E-67 4.9E-72 518.0 33.4 351 1-374 39-416 (421)
3 2xr7_A Malonyltransferase; xen 100.0 1.3E-63 4.5E-68 494.5 26.0 350 1-365 36-444 (453)
4 2e1v_A Acyl transferase; BAHD 100.0 2.7E-62 9.2E-67 485.2 26.9 347 1-365 41-444 (454)
5 2rkv_A Trichothecene 3-O-acety 100.0 3.3E-60 1.1E-64 469.9 25.1 358 1-374 20-448 (451)
6 1q9j_A PAPA5, polyketide synth 98.8 1.2E-06 4.2E-11 84.3 22.7 242 24-287 36-314 (422)
7 2jgp_A Tyrocidine synthetase 3 98.5 1.2E-05 4.2E-10 79.8 20.7 239 23-286 132-400 (520)
8 1l5a_A Amide synthase, VIBH; n 98.4 3.8E-05 1.3E-09 74.3 21.7 235 24-286 35-304 (436)
9 4hvm_A Tlmii; PSI-biology, mid 98.3 3E-05 1E-09 76.4 19.1 246 23-286 48-327 (493)
10 2xhg_A Tyrocidine synthetase A 98.3 0.00028 9.5E-09 68.7 25.6 243 23-287 51-336 (466)
11 2vsq_A Surfactin synthetase su 97.8 0.0012 4.3E-08 72.8 21.7 240 23-286 48-327 (1304)
12 3fot_A 15-O-acetyltransferase; 97.6 0.0014 4.8E-08 65.0 15.8 153 109-262 177-365 (519)
13 3cla_A Type III chloramphenico 78.5 1.4 4.9E-05 37.9 3.4 29 110-138 181-209 (213)
14 2i9d_A Chloramphenicol acetylt 77.7 1.6 5.4E-05 37.8 3.4 28 110-137 189-216 (217)
15 1q23_A Chloramphenicol acetylt 77.1 1.7 5.7E-05 37.7 3.4 44 95-138 168-213 (219)
16 3rqc_A Probable lipoamide acyl 73.3 2 7E-05 37.2 3.0 30 110-139 187-216 (224)
17 1scz_A E2, dihydrolipoamide su 73.2 2.4 8.1E-05 37.1 3.4 30 110-139 196-225 (233)
18 1dpb_A Dihydrolipoyl-transacet 73.1 2.4 8.2E-05 37.3 3.4 30 110-139 208-237 (243)
19 2ii3_A Lipoamide acyltransfera 71.6 2.7 9.2E-05 37.4 3.4 30 110-139 224-253 (262)
20 3b8k_A PDCE2;, dihydrolipoylly 71.4 2.1 7.3E-05 37.5 2.7 29 110-138 204-232 (239)
21 3mae_A 2-oxoisovalerate dehydr 66.1 4.1 0.00014 36.1 3.4 30 110-139 210-239 (256)
22 3l60_A Branched-chain alpha-ke 64.9 4.5 0.00015 35.7 3.4 30 110-139 205-234 (250)
23 1x93_A Hypothetical protein HP 50.8 15 0.00051 23.2 3.0 38 174-218 2-39 (55)
24 3dva_I Dihydrolipoyllysine-res 46.6 4.1 0.00014 39.0 0.0 30 110-139 391-420 (428)
25 2k1o_A Putative; repressor, tr 46.3 35 0.0012 22.3 4.4 43 171-220 13-55 (66)
26 2xl1_A Arginine attenuator pep 41.0 16 0.00054 19.1 1.7 18 199-216 7-24 (26)
27 2kl8_A OR15; structural genomi 30.5 37 0.0013 22.7 2.7 34 22-55 10-47 (85)
28 2xt6_A 2-oxoglutarate decarbox 24.7 43 0.0015 36.1 3.4 30 110-139 192-221 (1113)
No 1
>4g22_A Hydroxycinnamoyl-COA shikimate/quinate hydroxycinnamoyltransferase; BAHD superfamily; 1.70A {Coffea canephora} PDB: 4g2m_A 4g0b_A
Probab=100.00 E-value=4.5e-69 Score=531.34 Aligned_cols=349 Identities=23% Similarity=0.363 Sum_probs=285.4
Q ss_pred CCcEEEEeeCCCCCCCCCCchhhHHHHHHHHHHhchhhccCCCcccC---CCeeEeecCCCceEEEEEEccchhhhcCCC
Q 041823 1 YNPLVLFYTADDEINNNNNTETLGNFIKQSLSEVFTCFYPLAGRIHK---DNNFIECNDEGIPFKKARVKCQLLHLLQNP 77 (374)
Q Consensus 1 y~~~v~fy~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~---~~~~i~~~~~gv~f~~a~~~~~~~~~~~~p 77 (374)
|++.+|||+.++. + ....+++||+||+++|++||||||||+. |+++|+||++||.|+||+++++++|+....
T Consensus 40 ~~~~~~~y~~~~~-~----~~~~~~~Lk~sLs~~L~~f~plAGRl~~~~~g~~~i~c~~~Gv~fv~A~~d~~l~~l~~~~ 114 (439)
T 4g22_A 40 HTPSVYFYRPTGS-S----NFFDAKVLKDALSRALVPFYPMAGRLKRDEDGRIEIECNGEGVLFVEAESDGVVDDFGDFA 114 (439)
T ss_dssp CCCEEEEECCCSC-T----TTTCHHHHHHHHHHHTTTTGGGGCEEEECTTSCEEEECCCCCEEEEEEEESSCGGGGTTCC
T ss_pred ceeeEEEEcCCCC-c----cccHHHHHHHHHHHHHhhccccceeeeeCCCCCEEEEECCCCCEEEEEEcCCcHHHhcCCC
Confidence 7899999997543 2 2356899999999999999999999975 579999999999999999999999997632
Q ss_pred ChhhhcccCCCcc-c-c-CCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhcCCCCCCCccccccccc
Q 041823 78 NPNELNKLLPFDL-A-E-AKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATARGEKHTVRVEFVSATLF 154 (374)
Q Consensus 78 ~~~~~~~l~p~~~-~-~-~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~~r~~l~ 154 (374)
....+++|+|..+ . + .+.|++.+|||+|+|||++||+++||.++||.|+++|+++||++|||......|++||+.+.
T Consensus 115 p~~~~~~l~p~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~rg~~~~~~P~~dr~~l~ 194 (439)
T 4g22_A 115 PTLELRRLIPAVDYSQGISSYALLVLQVTYFKCGGVSLGVGMRHHAADGFSGLHFINSWSDMARGLDVTLPPFIDRTLLR 194 (439)
T ss_dssp CCGGGGGGSCCCCTTSCTTSSCSEEEEEEECTTSCEEEEEEECTTTCCHHHHHHHHHHHHHHHTTCCCSSCCBCCGGGGC
T ss_pred CCHHHHhcCCCCCcccccccCceeEEEEEEecCCCEEEEEEeeeccCcHHHHHHHHHHHHHHhCCCCCCCCCcccccccc
Confidence 2235678888654 2 2 36899999999999999999999999999999999999999999999766678999998654
Q ss_pred CCCCCCC-------CCCCC----C-----CCC-CCeEEEEEEeCHHHHHHHHHhccCCC-CCCCChhhHHHHHHHHHHHH
Q 041823 155 PPKNILG-------FEPST----G-----ITK-QNVVTKRFVFTAPKIEEIRSNYTHSE-SCTPSRVEALSAFIWSRFVA 216 (374)
Q Consensus 155 ~~~~~p~-------~~~~~----~-----~~~-~~~~~~~f~f~~~~l~~Lk~~~~~~~-~~~~S~~d~l~A~iW~~~~~ 216 (374)
+ ++.|. +.+.+ . ... .++++++|+|++++|++||+++.++. ..++|+||+|+||+|||+++
T Consensus 195 ~-~~pp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~fs~~~i~~LK~~a~~~~~~~~~St~dal~A~iWr~~~r 273 (439)
T 4g22_A 195 A-RDPPQPQFQHIEYQPPPALAVSPQTAASDSVPETAVSIFKLTREQISALKAKSKEDGNTISYSSYEMLAGHVWRCACK 273 (439)
T ss_dssp C-CSSCCCSSCCGGGSCCC---------------CEEEEEEEECHHHHHHHHHGGGGGGCCCCCCHHHHHHHHHHHHHHH
T ss_pred C-CCCCCCCcCcccccCCCCCcccccccccCCcccceEEEEEECHHHHHHHHHHhhccCCCCCccHHHHHHHHHHHHHHH
Confidence 2 22221 11110 0 112 57899999999999999999997653 46799999999999999999
Q ss_pred hcCCCCCCCCCceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCC-CCcCCChHHHHHHHHHHHHhhcHHHHHHh
Q 041823 217 ATKPSHKTSDHRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDN-EDEERYNHIIISQMRDSLRKVDKDYVKKL 295 (374)
Q Consensus 217 ar~~~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~-~~~~l~~~~~A~~ir~~i~~~~~~~~~~~ 295 (374)
||... +++.+++.++||+|+|++||+|++||||++..+.+.+++++ .+.+|++ +|.+||+++++++++|+++.
T Consensus 274 Ar~~~----~~~~~~l~~~vd~R~rl~Pplp~~Y~GN~v~~~~~~~~~~el~~~~L~~--~A~~Ir~ai~~~~~e~~~~~ 347 (439)
T 4g22_A 274 ARGLE----VDQGTKLYIATDGRARLRPSLPPGYFGNVIFTATPIAIAGDLEFKPVWY--AASKIHDALARMDNDYLRSA 347 (439)
T ss_dssp HTTCC----TTCEEEEEEEEECTTTSSSCCCTTBCSCCEEEECCEEEHHHHHHSCHHH--HHHHHHHHHHTCSHHHHHHH
T ss_pred hcCCC----CCCcEEEEEEEcccCCCCCCCCCCcccceeehhhcceEHHHHhhCcHHH--HHHHHHHHHHhhCHHHHHHH
Confidence 99763 46899999999999999999999999999999988888887 6789999 99999999999999999998
Q ss_pred hcccchhhHHHHHHh---hhc-CCCcceEEEecCCCCCC-------C-C---------CCcEEEEEecCCCCCcEEEEEE
Q 041823 296 QQGDEHLGFIRDRAE---KFA-RGEIVSFSFTSLCRFPL-------L-S---------FKNLVTFMDTVSGDHGVEAWIN 354 (374)
Q Consensus 296 ~~~~~~~~~~~~~~~---~~~-~~~~~~~~~ssw~~~g~-------G-p---------~~g~~~l~p~~~g~gg~ev~v~ 354 (374)
++ |++..++... ... .+. ..+.+|||++|++ | | .+|.++++|+++++|||||.|+
T Consensus 348 ~~---~~~~~~~~~~~~~~~~~~~~-~~~~vssw~r~~~y~~DFGwGkP~~~~~~~~~~~g~~~~~p~~~~~ggi~v~v~ 423 (439)
T 4g22_A 348 LD---YLELQPDLKALVRGAHTFKC-PNLGITSWVRLPIHDADFGWGRPIFMGPGGIAYEGLSFILPSPTNDGSMSVAIS 423 (439)
T ss_dssp HH---HHHTCSCSTTCCCCHHHHCT-TCEEEEECTTSCTTCCCCSSCCCSEEEESSCCSTTEEEEEECTTCSSCEEEEEE
T ss_pred HH---HHHhCccchhhcccCCcCcC-CcEEEeecCcCCccccccCCCCcceeeccccCCCcEEEEeecCCCCCcEEEEEE
Confidence 77 6543321110 000 012 2489999998765 4 3 4688999999887889999999
Q ss_pred cCHHHHHhhhc
Q 041823 355 LKEEDMAKLEA 365 (374)
Q Consensus 355 L~~~~m~~l~~ 365 (374)
|++++|++|++
T Consensus 424 L~~~~m~~f~~ 434 (439)
T 4g22_A 424 LQGEHMKLFQS 434 (439)
T ss_dssp EEHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999986
No 2
>2bgh_A Vinorine synthase; VS, BAHD, acetyltransferase, auto-rickshaw, transferase; 2.6A {Rauvolfia serpentina}
Probab=100.00 E-value=1.4e-67 Score=517.97 Aligned_cols=351 Identities=36% Similarity=0.633 Sum_probs=290.2
Q ss_pred CCcEEEEeeCCCCCCCCCCchhhHHHHHHHHHHhchhhccCCCcccCCCeeEeecCCCceEEEEEEccchhhhcCC-CCh
Q 041823 1 YNPLVLFYTADDEINNNNNTETLGNFIKQSLSEVFTCFYPLAGRIHKDNNFIECNDEGIPFKKARVKCQLLHLLQN-PNP 79 (374)
Q Consensus 1 y~~~v~fy~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~~~~~i~~~~~gv~f~~a~~~~~~~~~~~~-p~~ 79 (374)
|++.+|||+.++... ...+..+++||+||+++|++||||||||+ ++++|+||++||.|++|+++++++|+... |+.
T Consensus 39 ~~~~~~~y~~~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~-~~~~i~c~~~Gv~fv~A~~d~~l~~~~~~~p~~ 115 (421)
T 2bgh_A 39 HIPFILFYPNPLDSN--LDPAQTSQHLKQSLSKVLTHFYPLAGRIN-VNSSVDCNDSGVPFVEARVQAQLSQAIQNVVEL 115 (421)
T ss_dssp EEEEEEEECCCSSCC--CCHHHHHHHHHHHHHHHTTTSGGGGSEEE-TTTEEECCCCCEEEEEEEESSCHHHHHSCCSSG
T ss_pred ccceEEEEeCCCccc--cchhhHHHHHHHHHHHHhhhcchhccccC-CCcEEEEcCCceEEEEEEEcCCHHHHhccCCCh
Confidence 688999999654310 11457899999999999999999999994 58999999999999999999999999875 666
Q ss_pred hhhcccCCCcc-c-----cCCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhcCCCCCCCccccc-cc
Q 041823 80 NELNKLLPFDL-A-----EAKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATARGEKHTVRVEFVS-AT 152 (374)
Q Consensus 80 ~~~~~l~p~~~-~-----~~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~~r-~~ 152 (374)
..++.|+|... . ..+.|++.+|||+|+|||++||+++||.++||.|+++|+++||++|||......|.+|| +.
T Consensus 116 ~~~~~l~p~~~~~~~~~~~~~~pll~vQvt~f~cgG~~lg~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~dr~~~ 195 (421)
T 2bgh_A 116 EKLDQYLPSAAYPGGKIEVNEDVPLAVKISFFECGGTAIGVNLSHKIADVLSLATFLNAWTATCRGETEIVLPNFDLAAR 195 (421)
T ss_dssp GGGGGGSSSCSSSSSSSCCCTTCSEEEEEEECTTSCEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCSCCCCCBCSHHHH
T ss_pred HHHHhcCCCCCCccccccccCCceEEEEEEEEcCCCEEEEEEeeEEechHHHHHHHHHHHHHHhcCCCCCCCCccccccc
Confidence 56778888653 1 23689999999999999999999999999999999999999999999975446789999 77
Q ss_pred ccCC-CCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCC-CCCChhhHHHHHHHHHHHHhcCCCCCCCCCceE
Q 041823 153 LFPP-KNILGFEPSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSES-CTPSRVEALSAFIWSRFVAATKPSHKTSDHRFY 230 (374)
Q Consensus 153 l~~~-~~~p~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~-~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~~ 230 (374)
+.|+ ++.|. + .+....++++++|+|++++|++||+++.++.. .++|+||+|+||+|+|+++||.... ++++.+
T Consensus 196 l~p~~~~~~~--~-~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~St~d~l~A~iW~~~~~Ar~~~~--~~~~~~ 270 (421)
T 2bgh_A 196 HFPPVDNTPS--P-ELVPDENVVMKRFVFDKEKIGALRAQASSASEEKNFSRVQLVVAYIWKHVIDVTRAKY--GAKNKF 270 (421)
T ss_dssp HSCCCTTCCC--C-CCCCCSSEEEEEEEECHHHHHHHHHHTC-----CCCCHHHHHHHHHHHHHHHHHHHHS--CCCSCE
T ss_pred cCCCcccCCC--C-ccCCccceEEEEEEECHHHHHHHHHHhhccCCCCCCchhHhHHHHHHHHHHHHhcccC--CCCCce
Confidence 7766 55444 1 22345679999999999999999999986543 6799999999999999999986422 245789
Q ss_pred EEEEEeeCCCCCCCCCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHhhcHHHHHHhhcccchhhHHHHHHh
Q 041823 231 TITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRKVDKDYVKKLQQGDEHLGFIRDRAE 310 (374)
Q Consensus 231 ~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (374)
.+.++||+|+|++||+|++||||++..+.+.+++++ +.+|++ +|.+||+++++++++|++++.+ +. +...
T Consensus 271 ~l~~~vd~R~rl~pplP~~y~GN~~~~~~~~~~~~~-~~~l~~--~a~~ir~ai~~~~~~~~~~~~~---~~---~~~~- 340 (421)
T 2bgh_A 271 VVVQAVNLRSRMNPPLPHYAMGNIATLLFAAVDAEW-DKDFPD--LIGPLRTSLEKTEDDHNHELLK---GM---TCLY- 340 (421)
T ss_dssp EEEEEEESGGGSSSCCCTTBCSCCEEEEEEEECTTC-CCCGGG--GHHHHHHHTCCCSSCHHHHHHH---HH---HHHH-
T ss_pred EEEEEecCccccCCCCCCCccceEEEEEEEEecccc-cccHHH--HHHHHHHHHHHHHHHHHHHHHH---HH---HHhh-
Confidence 999999999999999999999999999988888776 778999 9999999999999888886544 22 1111
Q ss_pred hhcCCCcceEEEecCCCCCC-------C-C---------CCcEEEEEecCCCCCcEEEEEEcCHHHHHhhhcChhhhccc
Q 041823 311 KFARGEIVSFSFTSLCRFPL-------L-S---------FKNLVTFMDTVSGDHGVEAWINLKEEDMAKLEADEKLLSFA 373 (374)
Q Consensus 311 ~~~~~~~~~~~~ssw~~~g~-------G-p---------~~g~~~l~p~~~g~gg~ev~v~L~~~~m~~l~~d~e~~~~~ 373 (374)
. .+..+.+.+|||++|++ | | .+|+++++|+++++ |+||.|+|++++|++|++ ||++|+
T Consensus 341 ~--~~~~~~~~vssw~~~~~y~~DFGwGkP~~v~~~~~~~~g~~~~~p~~~~~-gi~v~v~L~~~~m~~f~~--e~~~~~ 415 (421)
T 2bgh_A 341 E--LEPQELLSFTSWCRLGFYDLDFGWGKPLSACTTTFPKRNAALLMDTRSGD-GVEAWLPMAEDEMAMLPV--ELLSLV 415 (421)
T ss_dssp T--SCGGGEEEEEEETTSCGGGCCSSSCCCSEEECCCCCSTTEEEEEECTTSS-SEEEEEEEEHHHHHHSCH--HHHTTB
T ss_pred c--cCCCCeEEEeccccCCCcccccCCCccCeecccccCcCCEEEEEecCCCC-eEEEEEEcCHHHHHHHHH--HHHHhh
Confidence 1 12235699999988765 4 2 36889999998875 899999999999999988 999998
Q ss_pred C
Q 041823 374 S 374 (374)
Q Consensus 374 s 374 (374)
+
T Consensus 416 ~ 416 (421)
T 2bgh_A 416 D 416 (421)
T ss_dssp C
T ss_pred c
Confidence 5
No 3
>2xr7_A Malonyltransferase; xenobiotics, naphthols; HET: MLC; 3.10A {Nicotiana tabacum}
Probab=100.00 E-value=1.3e-63 Score=494.52 Aligned_cols=350 Identities=17% Similarity=0.268 Sum_probs=278.0
Q ss_pred CCcEEEEeeCCCCCCCCCCchhhHHHHHHHHHHhchhhccCCCcccC-----CCeeEeec-CCCceEEEEEEccchhhhc
Q 041823 1 YNPLVLFYTADDEINNNNNTETLGNFIKQSLSEVFTCFYPLAGRIHK-----DNNFIECN-DEGIPFKKARVKCQLLHLL 74 (374)
Q Consensus 1 y~~~v~fy~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~-----~~~~i~~~-~~gv~f~~a~~~~~~~~~~ 74 (374)
|++.+|||+.++..+ ++.+..+++||+||+++|++||||||||+. |+++|+|| ++||.|+||+++.+++++.
T Consensus 36 ~~~~~~~y~~~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~ 113 (453)
T 2xr7_A 36 RMRRILFYKLPISRP--DFVQTIIPTLKDSLSLTLKYYLPLAGNVACPQDWSGYPELRYVTGNSVSVIFSESDMDFNYLI 113 (453)
T ss_dssp CEEEEEEEECCCCSH--HHHHTHHHHHHHHHHHHHTTSGGGGSCCEEESSTTCCCEEEEETTCCCEEEEEECCSCHHHHT
T ss_pred CccEEEEEeCCCCCc--hhHHHHHHHHHHHHHHHhhhccccCeeEEccCCCCCCEEEEecCCCceEEEEEecCCCHHHhh
Confidence 789999998654311 113467999999999999999999999953 47999999 5999999999999999997
Q ss_pred C-C-CChhhhcccCCCcc-ccCC-----CCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc-CC-C---
Q 041823 75 Q-N-PNPNELNKLLPFDL-AEAK-----ELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR-GE-K--- 141 (374)
Q Consensus 75 ~-~-p~~~~~~~l~p~~~-~~~~-----~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~-~--- 141 (374)
. . +....++.|+|..+ .+.. .|++.+|||+|+|||++||+++||.++||.|+++|+++||++|| |. .
T Consensus 114 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cGG~~lg~~~~H~v~Dg~~~~~Fl~~wa~~~r~G~~~~~~ 193 (453)
T 2xr7_A 114 GYHPRNTKDFYHFVPQLAEPKDAPGVQLAPVLAIQVTLFPNHGISIGFTNHHVAGDGATIVKFVRAWALLNKFGGDEQFL 193 (453)
T ss_dssp CSSCCCGGGGGGGSCCCCCCEEETTEEECCCEEEEEEEETTTEEEEEEEECTTTCCSHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred ccCCCChhhhhcCCCCCCCcccccccccCCeEEEEEEEccCCcEEEEEeeeeeeechhHHHHHHHHHHHHhhcCCCcccC
Confidence 5 2 23445678888754 1112 89999999999999999999999999999999999999999999 76 2
Q ss_pred -CCCCcccccccccCCCCC-----CCC-C-CCC-C----CCCCCeEEEEEEeCHHHHHHHHHhccCCCC--CCCChhhHH
Q 041823 142 -HTVRVEFVSATLFPPKNI-----LGF-E-PST-G----ITKQNVVTKRFVFTAPKIEEIRSNYTHSES--CTPSRVEAL 206 (374)
Q Consensus 142 -~~~~P~~~r~~l~~~~~~-----p~~-~-~~~-~----~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~--~~~S~~d~l 206 (374)
....|.+||+.+.+|... ..+ . +.. . ....++++++|+|++++|++||+++.++.. .++|+||+|
T Consensus 194 ~~~~~P~~dr~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~Lk~~a~~~~~~~~~~St~~~l 273 (453)
T 2xr7_A 194 ANEFIPFYDRSVIKDPNGVGMSIWNEMKKYKHMMKMSDVVTPPDKVRGTFIITRHDIGKLKNLVLTRRPKLTHVTSFTVT 273 (453)
T ss_dssp CGGGSCBCCCSSSCCSSCHHHHTTTTGGGCTTTSCCSCCCCCCSCCCEEEEECHHHHHHHHHHHHHHSCCCSCCCHHHHH
T ss_pred CCCCCCccccccccCCCCcchHHHHhccccCCccccccccCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHHHH
Confidence 134689999877654321 001 0 110 0 123567799999999999999999975432 579999999
Q ss_pred HHHHHHHHHHhcCCCCCC-CCCceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCC-C-CcCCChHHHHHHHHHH
Q 041823 207 SAFIWSRFVAATKPSHKT-SDHRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDN-E-DEERYNHIIISQMRDS 283 (374)
Q Consensus 207 ~A~iW~~~~~ar~~~~~~-~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~-~-~~~l~~~~~A~~ir~~ 283 (374)
+||+|+|+++||...... ++++.+.+.++||+|+|++||+|++||||++..+.+.+++++ . +.+|++ +|.+||++
T Consensus 274 ~A~lW~~~~~Ar~~~~~~~~~~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~--~a~~Ir~a 351 (453)
T 2xr7_A 274 CAYVWTCIIKSEAATGEEIDENGMEFFGCAADCRAQFNPPLPPSYFGNALVGYVARTRQVDLAGKEGFTI--AVELIGEA 351 (453)
T ss_dssp HHHHHHHHHHHHHHTTCCCCTTSEEEEEEECCTTSCSSSCCCTTBCSCCCCEEEEEEEHHHHTSSSHHHH--HHHHHHHH
T ss_pred HHHHHHHHHHHhccccccCCCCcceEEEEEecccccCCCCCCcccccceeeeeeeeeeHHHhcCcchHHH--HHHHHHHH
Confidence 999999999999642100 235789999999999999999999999999999988888887 5 479999 99999999
Q ss_pred HHh--hcHH-HHHHhhcccchhhHHHHHHhhhcCCCcceEEEecCCCCCC-------C-C---------CCc--EEEEEe
Q 041823 284 LRK--VDKD-YVKKLQQGDEHLGFIRDRAEKFARGEIVSFSFTSLCRFPL-------L-S---------FKN--LVTFMD 341 (374)
Q Consensus 284 i~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~g~-------G-p---------~~g--~~~l~p 341 (374)
+++ ++++ |+++ + |++..++ +. ....+.+|||++|++ | | .+| .++++|
T Consensus 352 i~~~~~~~e~~~~~--~---~~~~~~~----~~--~~~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~~~l~~ 420 (453)
T 2xr7_A 352 IRKRMKDEEWILSG--S---WFKEYDK----VD--AKRSLSVAGSPKLDLYAADFGWGRPEKLEFVSIDNDDGISMSLSK 420 (453)
T ss_dssp HTTSSSCHHHHHSS--C---TTSCCCC----SC--GGGEEEECSCSSCCGGGCCCSSCSCSEEEEGGGSSCSSCEEEEEE
T ss_pred HHhhccCCccchhh--H---HHHHHHh----hc--cCCcEEEeccccCCccccccCCCcceEEEeeeecCCCceEEEEee
Confidence 999 5788 8886 4 5432111 11 123599999998765 4 3 367 888999
Q ss_pred cCCCCCcEEEEEEcCHHHHHhhhc
Q 041823 342 TVSGDHGVEAWINLKEEDMAKLEA 365 (374)
Q Consensus 342 ~~~g~gg~ev~v~L~~~~m~~l~~ 365 (374)
+++++|||||.|+|++++|++|++
T Consensus 421 ~~~~~ggi~v~v~L~~~~m~~f~~ 444 (453)
T 2xr7_A 421 SKDSDGDLEIGLSLSKTRMNAFAA 444 (453)
T ss_dssp CSSSTTCEEEEECCCHHHHHHHHH
T ss_pred cCCCCCCEEEEEEeCHHHHHHHHH
Confidence 888888999999999999999964
No 4
>2e1v_A Acyl transferase; BAHD superfamily, seleno-methionine derivative, dendranthema morifolium, DMAT; 1.80A {Chrysanthemum x morifolium} PDB: 2e1u_A 2e1t_A
Probab=100.00 E-value=2.7e-62 Score=485.16 Aligned_cols=347 Identities=19% Similarity=0.269 Sum_probs=273.2
Q ss_pred CCcEEEEeeCCCCCCCCCCchhhHHHHHHHHHHhchhhccCCCccc-C----CCeeEeec-CCCceEEEEEEccchhhhc
Q 041823 1 YNPLVLFYTADDEINNNNNTETLGNFIKQSLSEVFTCFYPLAGRIH-K----DNNFIECN-DEGIPFKKARVKCQLLHLL 74 (374)
Q Consensus 1 y~~~v~fy~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~-~----~~~~i~~~-~~gv~f~~a~~~~~~~~~~ 74 (374)
|++.+|||+.++..+ ++.+..+++||+||+++|++||||||||+ . |+++|+|| ++||.|+||+++.+++++.
T Consensus 41 ~~~~~~~y~~~~~~~--~~~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~g~~~i~c~~~~gv~fv~A~~~~~l~~l~ 118 (454)
T 2e1v_A 41 PINNLFFYELPITRS--QFTETVVPNIKHSLSITLKHFYPFVGKLVVYPAPTKKPEICYVEGDSVAVTFAECNLDLNELT 118 (454)
T ss_dssp CEEEEEEEECCCCHH--HHHHTHHHHHHHHHHHHHTTCGGGGSEEEECSSSSSCCEEEECTTCCEEEEEEEECSCGGGTS
T ss_pred CccEEEEEeCCCCcc--hhhHHHHHHHHHHHHHHhhhccccceeeeeccCCCCCEEEEECCCCcEEEEEEEeCCCHHHhc
Confidence 789999998654310 01235789999999999999999999997 4 37999999 5999999999999999997
Q ss_pred CC-C-ChhhhcccCCCcc-c-c----CCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc-CCC-C--
Q 041823 75 QN-P-NPNELNKLLPFDL-A-E----AKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR-GEK-H-- 142 (374)
Q Consensus 75 ~~-p-~~~~~~~l~p~~~-~-~----~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r-g~~-~-- 142 (374)
.. + +...++.|+|..+ . + .+.|++.+|||+|+|||++||+++||.++||.|+++|+++||++|| |.. .
T Consensus 119 ~~~~~~~~~~~~l~p~~~~~~~~~~~~~~pll~vQvT~f~cgG~~lg~~~~H~v~Dg~~~~~Fl~awa~~~r~g~~~~~~ 198 (454)
T 2e1v_A 119 GNHPRNCDKFYDLVPILGESTRLSDCIKIPLFSVQVTLFPNQGIAIGITNHHCLGDASTRFCFLKAWTSIARSGNNDESF 198 (454)
T ss_dssp SSSCEEGGGGGGGSCCCCCCEECSSCEEEECEEEEEEEETTTEEEEEEEECGGGCCHHHHHHHHHHHHHHHHTTSCCHHH
T ss_pred CCCCCcchhhhcCCCCCCCcccccccccCceEEEEEEEecCCcEEEEEEeeeeecchhHHHHHHHHHHHHhccCCCcccc
Confidence 52 2 3345678888654 1 1 1359999999999999999999999999999999999999999999 863 1
Q ss_pred ---CCCcccccccccCCC-------CCCCCC------CCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCC--CCCChhh
Q 041823 143 ---TVRVEFVSATLFPPK-------NILGFE------PSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSES--CTPSRVE 204 (374)
Q Consensus 143 ---~~~P~~~r~~l~~~~-------~~p~~~------~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~--~~~S~~d 204 (374)
...|.+|| .+..|. ..+... +.....+.+.++++|+|++++|++||+++.++.. .++|+||
T Consensus 199 ~~~~~~P~~dr-~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~~~~~St~d 277 (454)
T 2e1v_A 199 LANGTRPLYDR-IIKYPMLDEAYLKRAKVESFNEDYVTQSLAGPSDKLRATFILTRAVINQLKDRVLAQLPTLEYVSSFT 277 (454)
T ss_dssp HHHSCCCBCCC-CCCCHHHHHHHHHHTTCTTHHHHCCCCCCCCCCCEEEEEEEECHHHHHHHHHHHHHHCTTCSCCCHHH
T ss_pred CCCCCCCcccc-cCCCCCcchHHHHhhhccccccccCcccCCCCCCceEEEEEECHHHHHHHHHHHhhcCCCCCcccHHH
Confidence 34689998 553221 000000 0000124578899999999999999999975432 5799999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCCCceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCC-C-CcCCChHHHHHHHHH
Q 041823 205 ALSAFIWSRFVAATKPSHKTSDHRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDN-E-DEERYNHIIISQMRD 282 (374)
Q Consensus 205 ~l~A~iW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~-~-~~~l~~~~~A~~ir~ 282 (374)
+|+||+|+|+++|| . ++.+++.++||+|+|++||+|++||||++..+.+.+++++ . +.+|++ +|.+||+
T Consensus 278 ~l~A~lWr~~~~Ar--~-----~~~~~l~~~vd~R~rl~pplP~~Y~GN~~~~~~~~~~~~el~~~~~l~~--~a~~Ir~ 348 (454)
T 2e1v_A 278 VACAYIWSCIAKSR--N-----DKLQLFGFPIDRRARMKPPIPTAYFGNCVGGCAAIAKTNLLIGKEGFIT--AAKLIGE 348 (454)
T ss_dssp HHHHHHHHHHHHHH--C-----CSEEEEEEEEECGGGSSSCCCTTBCSCCEEEEEEEEEGGGTSHHHHHHH--HHHHHHH
T ss_pred HHHHHHHHHHhhhc--C-----CCceEEEEEecchhccCCCCCcccccceeeeEEeecchhhccccccHHH--HHHHHHH
Confidence 99999999999999 2 4789999999999999999999999999999999888888 5 378999 9999999
Q ss_pred HHHhhcHHHHHHhhcc--cchhhHHHHHHhhhcCCCcceEEEecCCCCCC-------C-C---------CCcEEEEEecC
Q 041823 283 SLRKVDKDYVKKLQQG--DEHLGFIRDRAEKFARGEIVSFSFTSLCRFPL-------L-S---------FKNLVTFMDTV 343 (374)
Q Consensus 283 ~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ssw~~~g~-------G-p---------~~g~~~l~p~~ 343 (374)
++++++++|+++.+.. ..|++. .. .+ .+. ..+.+|||++|++ | | .+|.++++|++
T Consensus 349 ai~~~~~~~~~~~~~~~~~~~~~~---~~-~~-~~~-~~~~vssw~~~~~y~~DFG~G~P~~v~~~~~~~~g~~~l~p~~ 422 (454)
T 2e1v_A 349 NLHKTLTDYKDGVLKDDMESFNDL---VS-EG-MPT-TMTWVSGTPKLRFYDMDFGWGKPKKLETVSIDHNGAISINSCK 422 (454)
T ss_dssp HHHHHHHHHHTTCCCC-----CHH---HH-HC-CCS-EEEEEECCTTSCGGGCCSSSCSCSEEEEGGGGGSSEEEEEECS
T ss_pred HHHhhhhhhhHHHHHHHHHHHHHH---HH-hh-cCC-ceEEEecCCCCCcccccccCccceEEEeeeeCCCCeEEEEecC
Confidence 9999987777665431 113321 11 11 122 2599999998765 4 3 36889999998
Q ss_pred CCCCcEEEEEEcCHHHHHhhhc
Q 041823 344 SGDHGVEAWINLKEEDMAKLEA 365 (374)
Q Consensus 344 ~g~gg~ev~v~L~~~~m~~l~~ 365 (374)
+++|||||.|+|++++|++|++
T Consensus 423 ~~~ggi~v~v~L~~~~m~~f~~ 444 (454)
T 2e1v_A 423 ESNEDLEIGVCISATQMEDFVH 444 (454)
T ss_dssp SCTTSEEEEEEEEHHHHHHHHH
T ss_pred CCCCCEEEEEEECHHHHHHHHH
Confidence 8888999999999999999954
No 5
>2rkv_A Trichothecene 3-O-acetyltransferase; BAHD superfamily, deoxyniv T-2, acetyl COA, fusarium; HET: COA MPO ZBA; 1.60A {Gibberella zeae} PDB: 3b2s_A* 3b30_A* 2rkt_A* 2zba_A*
Probab=100.00 E-value=3.3e-60 Score=469.89 Aligned_cols=358 Identities=19% Similarity=0.214 Sum_probs=272.0
Q ss_pred CCcEEEEeeCCCCCCCCCCchhhHHHHHHHHHHhchhhccCCCcccC--------CCeeEeecCCCceEEEEEEcc----
Q 041823 1 YNPLVLFYTADDEINNNNNTETLGNFIKQSLSEVFTCFYPLAGRIHK--------DNNFIECNDEGIPFKKARVKC---- 68 (374)
Q Consensus 1 y~~~v~fy~~~~~~~~~~~~~~~~~~Lk~sLs~~L~~~p~LaGrl~~--------~~~~i~~~~~gv~f~~a~~~~---- 68 (374)
|++.+|||+.++..+ .++++++||+||+++|++||||||||+. |+++|+|++.++.|++++++.
T Consensus 20 y~~~~~~y~~~~~~~----~~~~~~~Lk~sLs~~L~~~~plAGRl~~~~~~~~~~g~~~i~~~~~~~~~~va~~~~d~~~ 95 (451)
T 2rkv_A 20 YTQISLLYPVSDSSQ----YPTIVSTFEQGLKRFSEAVPWVAGQVKAEGISEGNTGTSFIVPFEDVPRVVVKDLRDDPSA 95 (451)
T ss_dssp EEEEEEEEECSCGGG----HHHHHHHHHHHHHHHHHHSGGGGCEEEEESCBTTBCCEEEEECCCSSCEEEEEECTTCTTS
T ss_pred ceeEEEEEECCCCCC----HHHHHHHHHHHHHHHHHhCCceeEEEEECCCCCCCCCcEEEeecCCCCeEEEEeCCCCCCC
Confidence 789999999543212 5678999999999999999999999964 368999888777799998865
Q ss_pred -chhhhcC-CCChhhhc--ccCCCc-----c-c--cCCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHH
Q 041823 69 -QLLHLLQ-NPNPNELN--KLLPFD-----L-A--EAKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAAT 136 (374)
Q Consensus 69 -~~~~~~~-~p~~~~~~--~l~p~~-----~-~--~~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~ 136 (374)
+++++.. .+....++ .|.|.. . . ..+.|++.+|||+ .|||++||+++||+++||.|+++|+++||++
T Consensus 96 p~~~~l~~~~~p~~~~~~~~~~p~~~~p~~~~~~~~~~~pll~vQvT~-~~GG~~lg~~~~H~v~Dg~g~~~Fl~awa~~ 174 (451)
T 2rkv_A 96 PTIEGMRKAGYPMAMFDENIIAPRKTLPIGPGTGPDDPKPVILLQLNF-IKGGLILTVNGQHGAMDMVGQDAVIRLLSKA 174 (451)
T ss_dssp CBHHHHHHHTSCGGGSBHHHHCSSCSSSCSTTCSTTSCCBSEEEEEEE-EBTEEEEEEEEETTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHcCCChhhcCHhhcCCcccCCCCcccCCCCCCceEEEEEEE-ecCceeeeeeehhccccHHHHHHHHHHHHHH
Confidence 5777753 22111121 233321 1 1 2258999999995 4799999999999999999999999999999
Q ss_pred hcCCCCC----CCcccccccccCCC--CCCC-------CCCC-----CCCCCCCeEEEEEEeCHHHHHHHHHhccCCC--
Q 041823 137 ARGEKHT----VRVEFVSATLFPPK--NILG-------FEPS-----TGITKQNVVTKRFVFTAPKIEEIRSNYTHSE-- 196 (374)
Q Consensus 137 ~rg~~~~----~~P~~~r~~l~~~~--~~p~-------~~~~-----~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~-- 196 (374)
|||.... ..|++||+.+.|.. ..|. +.+. ......++++++|+|++++|++||+++.++.
T Consensus 175 ~rg~~~~~~~~~~p~~dr~~~~p~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~f~~~~i~~LK~~a~~~~~~ 254 (451)
T 2rkv_A 175 CRNDPFTEEEMTAMNLDRKTIVPYLENYTIGPEVDHQIVKADVAGGDAVLTPVSASWAFFTFSPKAMSELKDAATKTLDA 254 (451)
T ss_dssp HHTCCCCHHHHHHTTCCSTTSSCCCTTCCCCGGGTTCBCCTTSCC-------CCEEEEEEEECHHHHHHHHHHHHTTCCT
T ss_pred hcCCCCCccccccccCchhhccccccccCCCccccccccCCCCCCCCCCCCCCCceEEEEEECHHHHHHHHHHHhhhccC
Confidence 9996532 25788887655421 1121 1110 1122456889999999999999999997653
Q ss_pred -CCCCChhhHHHHHHHHHHHHhcCCCCCCCCCceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCC-CCcCCChH
Q 041823 197 -SCTPSRVEALSAFIWSRFVAATKPSHKTSDHRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDN-EDEERYNH 274 (374)
Q Consensus 197 -~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~-~~~~l~~~ 274 (374)
..++|+||+|+||+|||+++||.... ++++.+++.++||+|+|++ +|++||||++..+.+.+++++ .+.+|++
T Consensus 255 ~~~~~St~d~l~A~~Wr~~~~Ar~~~~--~~~~~~~l~~~vd~R~rl~--lP~~y~GN~~~~~~~~~~~~el~~~~L~~- 329 (451)
T 2rkv_A 255 STKFVSTDDALSAFIWKSASRVRLERI--DGSAPTEFCRAVDARPAMG--VSNNYPGLLQNMTYHNSTIGEIANESLGA- 329 (451)
T ss_dssp TCSCCCHHHHHHHHHHHHHHHHHTTTS--CTTSEEEEEEEEECHHHHT--CCTTCCSCCEEEEEEEEEHHHHHHSCHHH-
T ss_pred CCCCccHHHHHHHHHHHHHHHHHhccC--CCCCceEEEEEecccccCC--CCCCCcccceeeecccCcHHHhccchHHH-
Confidence 35799999999999999999982101 3568999999999999997 899999999999988888877 6789999
Q ss_pred HHHHHHHHHHHhhcHHH-HHHhhcccchhhHHHHHHhh-hc---CCCcceEEEecCCCCCC---------C-C-------
Q 041823 275 IIISQMRDSLRKVDKDY-VKKLQQGDEHLGFIRDRAEK-FA---RGEIVSFSFTSLCRFPL---------L-S------- 332 (374)
Q Consensus 275 ~~A~~ir~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~ssw~~~g~---------G-p------- 332 (374)
+|.+||+++++++.+| +++.++ |++..++.... +. .... .+.+|||++|++ | |
T Consensus 330 -~a~~ir~ai~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~~~~ssw~~~~~y~~DFG~gwG~P~~v~~~~ 404 (451)
T 2rkv_A 330 -TASRLRSELDPASMRQRTRGLAT---YLHNNPDKSNVSLTADADPST-SVMLSSWAKVGLWDYDFGLGLGKPETVRRPI 404 (451)
T ss_dssp -HHHHHHTTCCHHHHHHHHHHHHH---HHHHCSCCTTBCTTTTCCTTT-CEEEEECTTCCGGGCCTTCSSCSCSEEECCB
T ss_pred -HHHHHHHHhcccCchhHHHHHHH---HHhcCCCccccccccccCCCC-CEEEeccccCCccccccCCCCCCceEEEcCC
Confidence 9999999999999888 888776 55432211110 11 1122 389999987654 4 2
Q ss_pred ---CCcEEEEEecCCCCCcEEEEEEcCHHHHHhhhcChhhhcccC
Q 041823 333 ---FKNLVTFMDTVSGDHGVEAWINLKEEDMAKLEADEKLLSFAS 374 (374)
Q Consensus 333 ---~~g~~~l~p~~~g~gg~ev~v~L~~~~m~~l~~d~e~~~~~s 374 (374)
.+|.++++|++ ++||+||.|+|++++|++|++|+||++|++
T Consensus 405 ~~~~~g~~~~~p~~-~~ggi~v~v~L~~~~m~~f~~d~ef~~~~~ 448 (451)
T 2rkv_A 405 FEPVESLMYFMPKK-PDGEFCAALSLRDEDMDRLKADKEWTKYAQ 448 (451)
T ss_dssp CSCCTTEEEECCCC-TTSCEEEEEEEEHHHHHHHHHCHHHHTTCE
T ss_pred ccCCCCEEEEecCC-CCCCEEEEEEeCHHHHHHHhcCHHHHhhhe
Confidence 35788888754 457999999999999999999999999985
No 6
>1q9j_A PAPA5, polyketide synthase associated protein 5; conjugating enzyme PAPA5, structural genomics, PSI protein structure initiative; 2.75A {Mycobacterium tuberculosis} SCOP: c.43.1.2 c.43.1.2
Probab=98.77 E-value=1.2e-06 Score=84.33 Aligned_cols=242 Identities=14% Similarity=0.104 Sum_probs=138.2
Q ss_pred HHHHHHHHHHhchhhccCCCcccC--CCe-eEeecCCCce-EEEEEEccchhhhcCCCChhhh-cccCCCccccCCCCce
Q 041823 24 GNFIKQSLSEVFTCFYPLAGRIHK--DNN-FIECNDEGIP-FKKARVKCQLLHLLQNPNPNEL-NKLLPFDLAEAKELPI 98 (374)
Q Consensus 24 ~~~Lk~sLs~~L~~~p~LaGrl~~--~~~-~i~~~~~gv~-f~~a~~~~~~~~~~~~p~~~~~-~~l~p~~~~~~~~P~l 98 (374)
.+.|+++|.+++..+|.|-.++.. +.. .+........ +.+ .|+........+ +.-.|. + ...|++
T Consensus 36 ~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~-------~d~~~~~~~~~~~~~~~~~--d-~~~pl~ 105 (422)
T 1q9j_A 36 VDALSDAFDALLETHPVLASHLEQSSDGGWNLVADDLLHSGICV-------IDGTAATNGSPSGNAELRL--D-QSVSLL 105 (422)
T ss_dssp HHHHHHHHHHHHHHCGGGSEEEEECTTSSEEEEECCSSSCCCEE-------EC------------CCCCC--C-TTTCSE
T ss_pred HHHHHHHHHHHHHhCccceEEEEecCCcceeeeccCCCCCceEE-------EECCCCCcchhhhcccCcc--C-CCCCcE
Confidence 789999999999999999998843 221 1111111111 111 111110000001 100111 2 467899
Q ss_pred EEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc-----CCCCCCC--cccc--------ccccc---C---C-
Q 041823 99 GIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR-----GEKHTVR--VEFV--------SATLF---P---P- 156 (374)
Q Consensus 99 ~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r-----g~~~~~~--P~~~--------r~~l~---~---~- 156 (374)
.+.+.. ..++..|.+.+||.++||.|+..|++.|.+.++ |.....+ +.-+ +.... + .
T Consensus 106 r~~l~~-~~~~~~l~l~~hH~i~Dg~S~~~l~~~l~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (422)
T 1q9j_A 106 HLQLIL-REGGAELTLYLHHCMADGHHGAVLVDELFSRYTDAVTTGDPGPITPQPTPLSMEAVLAQRGIRKQGLSGAERF 184 (422)
T ss_dssp EEEEEC-CSSSCEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHHSSSCCCCCCCCCCBCHHHHHHHSSCCC-----CTTS
T ss_pred EEEEEe-cCCCeEEEEEeceEEEchhhHHHHHHHHHHHHHHhhccCCCCCCCCCCCCCCHHHHHHhcCCcccccchhhhh
Confidence 888877 778899999999999999999999999999876 3322111 1111 00000 0 0
Q ss_pred -CC-----CC-CCC-C--CCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCCCCCCCC
Q 041823 157 -KN-----IL-GFE-P--STGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKPSHKTSD 226 (374)
Q Consensus 157 -~~-----~p-~~~-~--~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~ 226 (374)
++ ++ ... | .............+.++.+..++|++.|.. ..+|.+.++.|.+-..+.+-+.. .
T Consensus 185 ~~~~W~~~l~~~~~lp~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~l~r~~~~-----~ 256 (422)
T 1q9j_A 185 MSVMYAYEIPATETPAVLAHPGLPQAVPVTRLWLSKQQTSDLMAFGRE---HRLSLNAVVAAAILLTEWQLRNT-----P 256 (422)
T ss_dssp STTTTCC-------------CCSBCCCCEEEECCCHHHHHHHHHHHTT---TTCCHHHHHHHHHHHHHHHHHTC-----S
T ss_pred hhhhhcccCCCcccCCCCCCCCCCCCccceEEEeCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHhcccC-----C
Confidence 00 01 100 0 000112224568889999999999999975 35899999988765555544222 2
Q ss_pred CceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHhh
Q 041823 227 HRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRKV 287 (374)
Q Consensus 227 ~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~~ 287 (374)
.....+.++++.|....|+++..=+.|.+.+....++... +.++.+ ++..+++.+.+.
T Consensus 257 ~~~v~~g~~~~~R~~~~~~~~~~~~~~~vG~f~n~lp~~~-~~~~~~--~l~~v~~~~~~~ 314 (422)
T 1q9j_A 257 HVPIPYVYPVDLRFVLAPPVAPTEATNLLGAASYLAEIGP-NTDIVD--LASDIVATLRAD 314 (422)
T ss_dssp SCCEEEEEEEETTTTSSSCCCTTTBSCCEEEEEEEECCCS-SCCHHH--HHHHHHHHHHHH
T ss_pred CceEEEeeeeecccccCCCCChhhhhhhheeeeeeeeccC-CCCHHH--HHHHHHHHHHHH
Confidence 3668899999999987665542223344433333333322 335556 777777776553
No 7
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=98.47 E-value=1.2e-05 Score=79.83 Aligned_cols=239 Identities=9% Similarity=-0.008 Sum_probs=140.0
Q ss_pred hHHHHHHHHHHhchhhccCCCcccC--CCee-EeecCCCceEEEEEEccchhhhcCCCChhhhccc-CCCccccCCCCce
Q 041823 23 LGNFIKQSLSEVFTCFYPLAGRIHK--DNNF-IECNDEGIPFKKARVKCQLLHLLQNPNPNELNKL-LPFDLAEAKELPI 98 (374)
Q Consensus 23 ~~~~Lk~sLs~~L~~~p~LaGrl~~--~~~~-i~~~~~gv~f~~a~~~~~~~~~~~~p~~~~~~~l-~p~~~~~~~~P~l 98 (374)
..+.|++++.+++..++.|--++.. +.+. +...+..+.+... +.+-+++.. ..+.+ -|.. -...|++
T Consensus 132 d~~~l~~A~~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~--~~~~~~~~~-----~~~~~~~~fd--l~~~pl~ 202 (520)
T 2jgp_A 132 ERTRVEAAFQRLIARHESLRTSFAVVNGEPVQNIHEDVPFALAYS--EVTEEEARE-----LVSSLVQPFD--LEVAPLI 202 (520)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEEETTEEEEEECSCCCCCCEEE--ECCHHHHHH-----HHHHTCCCCC--TTSSCCE
T ss_pred CHHHHHHHHHHHHHHhHhheeEEEeeCCEEEEEECCCCCCceEEE--eCCHHHHHH-----HHHHhcCCCC--CCCCcce
Confidence 3789999999999999999888743 2221 1111111222111 111111110 00111 1111 1247888
Q ss_pred EEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhcCCCCCCCc-cc-c-----ccc----------------cc-
Q 041823 99 GIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATARGEKHTVRV-EF-V-----SAT----------------LF- 154 (374)
Q Consensus 99 ~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P-~~-~-----r~~----------------l~- 154 (374)
.+.+.....+...|.+.+||.++||.|+..|++.+.+.+++......| .+ + +.. +.
T Consensus 203 r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~el~~~Y~~~~l~~~~~~~~d~~~~~~~~~~~~~~~~~~~yW~~~l~~ 282 (520)
T 2jgp_A 203 RVSLLKIGEDRYVLFTDMHHSISDGVSSGILLAEWVQLYQGDVLPELRIQYKDFAVWQQEFSQSAAFHKQEAYWLQTFAD 282 (520)
T ss_dssp EEEEEEEETTEEEEEEEEBGGGCCHHHHHHHHHHHHHHHTTCCCCCCSCCHHHHHHHHHHHTTSHHHHHHHHHHHHHTSS
T ss_pred eEEEEEEcCCcEEEEEEccceeecHhHHHHHHHHHHHHHccCCCCCCCCCHHHHHHHHHHhhcChhhHHHHHHHHHHhCC
Confidence 888777765778999999999999999999999999999875321111 11 0 100 00
Q ss_pred --CCCCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 041823 155 --PPKNILGFEPSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKPSHKTSDHRFYTI 232 (374)
Q Consensus 155 --~~~~~p~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~~~l 232 (374)
++..+|.-.+.+...........+.++.+..++|++.|.. ..+|.+.++.|.+-..+.+-.+ .....+
T Consensus 283 ~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~T~~~~l~aa~a~~L~~~~~-------~~dv~~ 352 (520)
T 2jgp_A 283 DIPVLNLPTDFTRPSTQSFAGDQCTIGAGKALTEGLHQLAQA---TGTTLYMVLLAAYNVLLAKYAG-------QEDIIV 352 (520)
T ss_dssp CCCCCCCCCSSCCCSSCCCBEEEEEEECCHHHHHHHHHHHHH---HTCCHHHHHHHHHHHHHHHHHT-------CSCEEE
T ss_pred CCCcCCCCCCCCCCCCCCCCccEEEEeCCHHHHHHHHHHHHH---cCCCHHHHHHHHHHHHHHHhcC-------CCCeEE
Confidence 0001121111111122345677889999999999998864 3589999888865444444432 356789
Q ss_pred EEEeeCCCCCCCCCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHh
Q 041823 233 THAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRK 286 (374)
Q Consensus 233 ~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~ 286 (374)
.++++.|.. + --++.+|+++-.......... +.++.+ ++..+++.+.+
T Consensus 353 g~~~~gR~~--~-~~~~~vG~f~n~lplr~~~~~-~~~~~~--~l~~v~~~~~~ 400 (520)
T 2jgp_A 353 GTPITGRSH--A-DLEPIVGMFVNTLAMRNKPQR-EKTFSE--FLQEVKQNALD 400 (520)
T ss_dssp EEEECCCCS--G-GGTTCCSCCCEEEEEEECCCT-TSBHHH--HHHHHHHHHHH
T ss_pred EeccCCCCc--h-hhhccEEeeeeeeeEEecCCC-CCCHHH--HHHHHHHHHHH
Confidence 999999975 2 224566776555444444332 335666 67766666544
No 8
>1l5a_A Amide synthase, VIBH; nonribosomal peptide synthetase, NRPS condensation domain, vibriobactin, biosynthetic protein; 2.55A {Vibrio cholerae} SCOP: c.43.1.2 c.43.1.2
Probab=98.40 E-value=3.8e-05 Score=74.29 Aligned_cols=235 Identities=10% Similarity=-0.012 Sum_probs=138.3
Q ss_pred HHHHHHHHHHhchhhccCCCcccC-CCeeEeecCCCceEEEEEEccchhhhcCCCCh-hhhc----ccC--CCccccCCC
Q 041823 24 GNFIKQSLSEVFTCFYPLAGRIHK-DNNFIECNDEGIPFKKARVKCQLLHLLQNPNP-NELN----KLL--PFDLAEAKE 95 (374)
Q Consensus 24 ~~~Lk~sLs~~L~~~p~LaGrl~~-~~~~i~~~~~gv~f~~a~~~~~~~~~~~~p~~-~~~~----~l~--p~~~~~~~~ 95 (374)
.+.|++++.+++..++.|--++.. +. .| .....+.+.+. ++...++. ..+. ... |.. -...
T Consensus 35 ~~~L~~A~~~lv~rh~~LRt~f~~~~~-~v-~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~fd--l~~~ 103 (436)
T 1l5a_A 35 TTLLLRALHLTVSEIDLFRARFSAQGE-LY-WHPFSPPIDYQ-------DLSIHLEAEPLAWRQIEQDLQRSST--LIDA 103 (436)
T ss_dssp HHHHHHHHHHHHHTCGGGGEEECTTCC-EE-ECSSCCCCEEE-------ECTTCTTHHHHHHHHHHHHHTSCCC--CBTS
T ss_pred HHHHHHHHHHHHHHhheeEEEEEecCC-eE-CCCcCCCccEE-------eCCCCCCHHHHHHHHHHHHhcCCCC--cCCC
Confidence 789999999999999999888843 22 11 11111122111 11111111 0111 111 111 1246
Q ss_pred CceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc----CCCCCCC-cccc------cccccCCC-------
Q 041823 96 LPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR----GEKHTVR-VEFV------SATLFPPK------- 157 (374)
Q Consensus 96 P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~-P~~~------r~~l~~~~------- 157 (374)
|++.+.+.....+...|.+.+||.++||.|+..|++.+.+.+. |.....+ +.+. +..+....
T Consensus 104 pl~r~~l~~~~~~~~~l~~~~HH~i~Dg~S~~~l~~~l~~~Y~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (436)
T 1l5a_A 104 PITSHQVYRLSHSEHLIYTRAHHIVLDGYGMMLFEQRLSQHYQSLLSGQTPTAAFKPYQSYLEEEAAYLTSHRYWQDKQF 183 (436)
T ss_dssp CSCEEEEEEEETTEEEEEEEEETTTCCHHHHHHHHHHHHHHHHHHHHTCCCCCCCCCHHHHHHHHHHHHTSHHHHHHHHH
T ss_pred CCeEEEEEEEcCCEEEEEEeehhheecHhHHHHHHHHHHHHHHHHhcCCCCCCCccCHHHHHHHHHHhhccHhHHHHHHH
Confidence 8888888777667899999999999999999999999999876 4432111 1111 00000000
Q ss_pred ------CCCC-CC-CC-CCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCCCCCCCCCc
Q 041823 158 ------NILG-FE-PS-TGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKPSHKTSDHR 228 (374)
Q Consensus 158 ------~~p~-~~-~~-~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~ 228 (374)
+.|. .. |. ............+.++.+..++|++.|.. ..+|.+.++.|.+-..+.+-. + .
T Consensus 184 W~~~l~~~~~~~~lp~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~~t~~~~l~aa~~~~L~~~~------g--~ 252 (436)
T 1l5a_A 184 WQGYLREAPDLTLTSATYDPQLSHAVSLSYTLNSQLNHLLLKLANA---NQIGWPDALVALCALYLESAE------P--D 252 (436)
T ss_dssp HHHHHHTSCCCCBCCTTCCGGGCCEEEEEEECCHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHS------T--T
T ss_pred HHHHhcCCCCcccCCCCCCCCcccceeeEEecCHHHHHHHHHHHHH---hCCCHHHHHHHHHHHHHHHhh------C--C
Confidence 1111 00 11 11122345678899999999999999875 358999988887544443332 2 5
Q ss_pred eEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHh
Q 041823 229 FYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRK 286 (374)
Q Consensus 229 ~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~ 286 (374)
...+..+++.|.. + --.+.+|+++-.......... +.++.+ ++..+++.+.+
T Consensus 253 dv~ig~~~~~R~~--~-~~~~~vG~f~n~lplr~~~~~-~~t~~~--~l~~v~~~~~~ 304 (436)
T 1l5a_A 253 APWLWLPFMNRWG--S-VAANVPGLMVNSLPLLRLSAQ-QTSLGN--YLKQSGQAIRS 304 (436)
T ss_dssp CCEEEEEECCCTT--S-GGGGSCSCCCEEEEEECCCCT-TCBHHH--HHHHHHHHHHH
T ss_pred ceEEeeecccCCC--h-HHhcCcceEEEEEEEEEecCC-CCCHHH--HHHHHHHHHHH
Confidence 6789999999965 2 234566666555444443322 335666 77777776654
No 9
>4hvm_A Tlmii; PSI-biology, midwest center for structural genomics, MCSG, N product biosynthesis, natPro; 2.70A {Streptoalloteichus hindustanus}
Probab=98.32 E-value=3e-05 Score=76.42 Aligned_cols=246 Identities=11% Similarity=0.028 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHhchhhccCCCcccC--CCeeEeecCCCceEEEEEEccchhhhcCCCCh-hhhc----ccCCCccccCCC
Q 041823 23 LGNFIKQSLSEVFTCFYPLAGRIHK--DNNFIECNDEGIPFKKARVKCQLLHLLQNPNP-NELN----KLLPFDLAEAKE 95 (374)
Q Consensus 23 ~~~~Lk~sLs~~L~~~p~LaGrl~~--~~~~i~~~~~gv~f~~a~~~~~~~~~~~~p~~-~~~~----~l~p~~~~~~~~ 95 (374)
..+.|+++|.+++..++.|--++.. +.+. ......+.+.+.. +...++. ..+. ...-...+-...
T Consensus 48 d~~~L~~A~~~lv~rh~~LRt~f~~~~~~~~-~v~~~~~~~~~~d-------~~~~~~~~~~~~~~~~~~~~~~fdl~~~ 119 (493)
T 4hvm_A 48 DDDRLAAAADEVLDAFPLLRVNFVDDDGLWM-RTRENADALVRSD-------LRGHPDPQARCVELLRADRDRPTDPERD 119 (493)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEEESSSEEE-EECSCCCCEEEEE-------CTTSSSHHHHHHHHHHHHHSSCCCTTTS
T ss_pred CHHHHHHHHHHHHHhchhceeEEEccCCEEE-EecCCCCCceEEE-------CCCCCchHHHHHHHHHHHhcCCCCCCCC
Confidence 3799999999999999999888743 2333 2222223333322 1111111 1111 111111011246
Q ss_pred CceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhcCCCCCCCcccc-----cc--cccCC------------
Q 041823 96 LPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATARGEKHTVRVEFV-----SA--TLFPP------------ 156 (374)
Q Consensus 96 P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~~~~~P~~~-----r~--~l~~~------------ 156 (374)
|++.+.+.....+...|.+.+||.++||.|+..+++.+.+.+.|.... .+..+ +. .+..+
T Consensus 120 pl~r~~l~~~~~~~~~l~l~~HH~i~Dg~S~~~l~~~l~~~Y~g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 198 (493)
T 4hvm_A 120 PLVRLHLVRLSETDVVLGVVAHQMLLDARSRYMVLGAVWQAYYGRFRP-AQYRDFAEVADFHPLDRETVRVARHRWWSRR 198 (493)
T ss_dssp CSEEEEEEECSSSEEEEEEEEETTTCCHHHHHHHHHHHHHHHTTCCCG-GGSBCGGGTTTCCTTCSHHHHHHHHHHHHHH
T ss_pred CeEEEEEEEECCCcEEEEEecchhhccHHHHHHHHHHHHHHhCCCCCC-cCHHHHHHHHhhhhcccChhhHHHHHHHHHh
Confidence 888888877775668999999999999999999999999999876432 11111 11 00000
Q ss_pred -CCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCC--hhhHHHHHHHHHHHHhcCC----CCCCCCCce
Q 041823 157 -KNILGFEPSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPS--RVEALSAFIWSRFVAATKP----SHKTSDHRF 229 (374)
Q Consensus 157 -~~~p~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S--~~d~l~A~iW~~~~~ar~~----~~~~~~~~~ 229 (374)
.+.|.+ +.............+.++.+..++|++.|.. ..+| .+.++.|.+-..+.+-+.- .........
T Consensus 199 l~~~~~l-~~~~~~~~~~~~~~~~l~~~~~~~l~~~a~~---~~vt~~~~~~l~aa~a~~L~~~~~~~~~~~~~~~g~~d 274 (493)
T 4hvm_A 199 LPALPVR-GGDGGPVGPPETSRLRVPGSRWQALTEPGGP---LGGNGSLAMAALTAWWLWTQGAGTGTDTGAGTGTGKDS 274 (493)
T ss_dssp GGGSCCC-C-------CCEEEEEEEEHHHHHHHHCC---------CHHHHHHHHHHHHHHHC----------------CE
T ss_pred ccCCCCC-CCCCCCCCCCeeEEEEcCHHHHHHHHHHHHH---cCCCchHHHHHHHHHHHHHHHhhhcccccccCcCCCCC
Confidence 001111 1000011126678899999999999998875 3588 9998888654433333000 000011367
Q ss_pred EEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCC-CCcCCChHHHHHHHHHHHHh
Q 041823 230 YTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDN-EDEERYNHIIISQMRDSLRK 286 (374)
Q Consensus 230 ~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~-~~~~l~~~~~A~~ir~~i~~ 286 (374)
..+..+++.|.. +--.+.+|+++-.....+.... .+.++.+ ++..+++.+.+
T Consensus 275 v~~g~~~~gR~~---~~~~~~vG~f~n~lplr~~~~~~~~~t~~~--~l~~v~~~~~~ 327 (493)
T 4hvm_A 275 LYLSTEVDLRDH---LQLGSVVGPLTDRVVFGVDLTGLREPSFRD--LMSRTQAGFLD 327 (493)
T ss_dssp EEEEEEEEHHHH---TTCCSBCSCCEEEEEEEEECTTCSSCBHHH--HHHHHHHHHHH
T ss_pred EEEEeeccCCCC---cchhcCeEeeeceeEEEEecCCCcCCCHHH--HHHHHHHHHHH
Confidence 899999999965 2334667776655544444332 0345666 77777766654
No 10
>2xhg_A Tyrocidine synthetase A; isomerase, nonribosomal peptide synthesis, cofactor-independ epimerization; 1.50A {Brevibacillus brevis}
Probab=98.31 E-value=0.00028 Score=68.74 Aligned_cols=243 Identities=13% Similarity=0.076 Sum_probs=139.8
Q ss_pred hHHHHHHHHHHhchhhccCCCcccC--CCee-Eeec--CCCceEEEEEEccchhhhcCCCChh-hhcc----c-CCCccc
Q 041823 23 LGNFIKQSLSEVFTCFYPLAGRIHK--DNNF-IECN--DEGIPFKKARVKCQLLHLLQNPNPN-ELNK----L-LPFDLA 91 (374)
Q Consensus 23 ~~~~Lk~sLs~~L~~~p~LaGrl~~--~~~~-i~~~--~~gv~f~~a~~~~~~~~~~~~p~~~-~~~~----l-~p~~~~ 91 (374)
..+.|+++|.+++...+.|--++.. +.+. +... +..+.+.+. + +....+.+ .++. + -|..
T Consensus 51 d~~~L~~Al~~lv~rh~~LRt~f~~~~~~~~q~v~~~~~~~~~~~~~--d-----~~~~~~~~~~~~~~~~~~~~~fd-- 121 (466)
T 2xhg_A 51 DPKVIQSVMDKIIEHHDALRMVYQHENGNVVQHNRGLGGQLYDFFSY--N-----LTAQPDVQQAIEAETQRLHSSMN-- 121 (466)
T ss_dssp CHHHHHHHHHHHHHHSGGGGEEEECGGGCCEEEECCSSSCCCEEEEE--E-----CTTCSCHHHHHHHHHHHHHTTCC--
T ss_pred CHHHHHHHHHHHHHhChHhheEEecCCCceeeeccccccccceeEEE--e-----cCCcccHHHHHHHHHHHHHhccC--
Confidence 3789999999999999999888754 2221 1111 112222222 1 11111100 0111 1 1111
Q ss_pred cCCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc----CCCCCCCc---ccc------ccccc----
Q 041823 92 EAKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR----GEKHTVRV---EFV------SATLF---- 154 (374)
Q Consensus 92 ~~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~P---~~~------r~~l~---- 154 (374)
-...|++.+.+.... ++-.|-+.+||.++||.|+..|++.+.+.++ |......| .+. +....
T Consensus 122 l~~~pl~r~~l~~~~-~~~~l~l~~HH~i~Dg~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~~y~~~~~~~~~~~~~~~~ 200 (466)
T 2xhg_A 122 LQEGPLVKVALFQTL-HGDHLFLAIHHLVVDGISWRILFEDLATGYAQALAGQAISLPEKTDSFQSWSQWLQEYANEADL 200 (466)
T ss_dssp TTTCCCEEEEEEEET-TEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCSCHHHHHHHHHHHTTSHHH
T ss_pred CCCCCeEEEEEEEcC-CCCEEEEEeeeeeechhhHHHHHHHHHHHHHHHHcCCCCCCCCCCCCHHHHHHHHHHHhcCccc
Confidence 124688888887776 4445779999999999999999999998875 43221111 110 00000
Q ss_pred --------------CCCCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCC
Q 041823 155 --------------PPKNILGFEPSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKP 220 (374)
Q Consensus 155 --------------~~~~~p~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~ 220 (374)
++..+|...+.............+.++++..++|++.+... ..+|.++++.|.+-..+.+-.+
T Consensus 201 ~~~~~~W~~~l~~~~~~~lp~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~--~~~t~~~~llaa~~~~l~~~~~- 277 (466)
T 2xhg_A 201 LSEIPYWESLESQAKNVSLPKDYEVTDCKQKSVRNMRIRLHPEETEQLLKHANQA--YQTEINDLLLAALGLAFAEWSK- 277 (466)
T ss_dssp HTTHHHHHHHHHHCCCCCCCCSSCCSSCBGGGEEEEEEECCHHHHHHHHHTGGGT--TTCCHHHHHHHHHHHHHHHHHC-
T ss_pred hhhhHHHHHhhccCCcccCCccccccccccccceEEEEEcCHHHHHHHHHHhHHh--hCCCHHHHHHHHHHHHHHHHhC-
Confidence 11111211111111223456778899999999999877432 3578899888876555554432
Q ss_pred CCCCCCCceEEEEEEeeCCCCCCC-CCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHhh
Q 041823 221 SHKTSDHRFYTITHAVNLRTKMEP-PLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRKV 287 (374)
Q Consensus 221 ~~~~~~~~~~~l~~~vd~R~r~~p-~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~~ 287 (374)
.....+.++++.|....+ +--.+-+|+.+-.....+.... +.++.+ ++..+++.+..+
T Consensus 278 ------~~dv~ig~~~~gR~~~~~~~~~~~~vG~f~n~lplr~~~~~-~~~~~~--~l~~v~~~~~~~ 336 (466)
T 2xhg_A 278 ------LAQIVIHLEGHGREDIIEQANVARTVGWFTSQYPVLLDLKQ-TAPLSD--YIKLTKENMRKI 336 (466)
T ss_dssp ------CSEEEEEEEECCCCSCSTTCCCTTCCSCCCEEEEEEEECSC-CCSHHH--HHHHHHHHHHHS
T ss_pred ------CCceEEEecCCCCCccccCCCccccccceeeeccEEEecCC-CCCHHH--HHHHHHHHHHhC
Confidence 356889999999976421 1234566776555444443322 346777 888888877665
No 11
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=97.83 E-value=0.0012 Score=72.79 Aligned_cols=240 Identities=8% Similarity=0.009 Sum_probs=139.5
Q ss_pred hHHHHHHHHHHhchhhccCCCcccCC--C--eeEeecCCCceEEEEEEccchhhhcCCCCh---hhhcccC------CCc
Q 041823 23 LGNFIKQSLSEVFTCFYPLAGRIHKD--N--NFIECNDEGIPFKKARVKCQLLHLLQNPNP---NELNKLL------PFD 89 (374)
Q Consensus 23 ~~~~Lk~sLs~~L~~~p~LaGrl~~~--~--~~i~~~~~gv~f~~a~~~~~~~~~~~~p~~---~~~~~l~------p~~ 89 (374)
..+.|+++|.+++..++.|--++..+ . ..+......+.+.+. |+...+.. ..+..++ |..
T Consensus 48 d~~~l~~A~~~lv~rH~~LRt~f~~~~~~~p~Q~v~~~~~~~~~~~-------d~~~~~~~~~~~~~~~~~~~~~~~~fd 120 (1304)
T 2vsq_A 48 NIKCLEESMNVIMDRYDVFRTVFIHEKVKRPVQVVLKKRQFHIEEI-------DLTHLTGSEQTAKINEYKEQDKIRGFD 120 (1304)
T ss_dssp CHHHHHHHHHHHHHHCGGGGEEEECSSCSSCEEEEESCCCCCEEEE-------ECTTSCHHHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHHHHHHHhhhhceEEEEEcCCCeEEEEECCCCCCceEEE-------ECCCCCchhHHHHHHHHHHHHhcCCCC
Confidence 37899999999999999998887431 1 122222222222221 12111110 0111111 111
Q ss_pred cccCCCCceEEEEEEeecCceEEEEEEEeeecChhhHHHHHHHHHHHhc----CCCCCCC--ccc-c-----cc------
Q 041823 90 LAEAKELPIGIQFNIFDCGGIGLGICISHKVGDAQSFFTFVKSWAATAR----GEKHTVR--VEF-V-----SA------ 151 (374)
Q Consensus 90 ~~~~~~P~l~vQvt~f~cgG~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r----g~~~~~~--P~~-~-----r~------ 151 (374)
-...|++.+.+.....+...|-+.+||.++||.|+..+++.+.+.++ |.....+ |.+ | ++
T Consensus 121 --l~~~pl~r~~l~~~~~~~~~l~~~~HHii~DG~S~~~l~~el~~~Y~~~~~g~~~~l~~~~~y~d~~~~~~~~~~~~~ 198 (1304)
T 2vsq_A 121 --LTRDIPMRAAIFKKAEESFEWVWSYHHIILDGWCFGIVVQDLFKVYNALREQKPYSLPPVKPYKDYIKWLEKQDKQAS 198 (1304)
T ss_dssp --TTTSCSEEEEEEEEETTEEEEEEEEEGGGCCHHHHHHHHHHHHHHHHHHHTTCCCCCCCCCCTHHHHHHHHTSCHHHH
T ss_pred --CCCCCcEEEEEEEECCCcEEEEEecCceeechhhHHHHHHHHHHHHHHhhcCCCCCCCCcccHHHHHHHHhcchhhHH
Confidence 12468998888888767889999999999999999999999998875 3321111 111 1 00
Q ss_pred ------ccc---CCCCCCCCCCCCCCCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCCCC
Q 041823 152 ------TLF---PPKNILGFEPSTGITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKPSH 222 (374)
Q Consensus 152 ------~l~---~~~~~p~~~~~~~~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~ 222 (374)
.+. ++..+|.. +.+...........+.++++..++||+.|... .+|.+.++.|.+-..+.+-.+
T Consensus 199 ~~yW~~~L~~~~~~~~lp~~-~~~~~~~~~~~~~~~~l~~~~~~~L~~~a~~~---~~T~~~vllaa~a~~L~r~tg--- 271 (1304)
T 2vsq_A 199 LRYWREYLEGFEGQTTFAEQ-RKKQKDGYEPKELLFSPSEAETKAFTELAKSQ---HTTLSTALQAVWSVLISRYQQ--- 271 (1304)
T ss_dssp HHHHHHHHTTCCCCCTTTTT-CCCSSCCCCEEEEEECCCHHHHHHHHHHHHHT---TCCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHHHHHhCCCCccccCCCC-CCccccccCcceEEEecCHHHHHHHHHHHHHc---CCCHHHHHHHHHHHHHHHhcC---
Confidence 000 01111211 01111223346677889999999999999753 588999888865344433332
Q ss_pred CCCCCceEEEEEEeeCCCCCCCCCCCCCcccceeceeeccccCCCCcCCChHHHHHHHHHHHHh
Q 041823 223 KTSDHRFYTITHAVNLRTKMEPPLPDYSFGNLYRTAVTIPCLDNEDEERYNHIIISQMRDSLRK 286 (374)
Q Consensus 223 ~~~~~~~~~l~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~~~~~~~~~l~~~~~A~~ir~~i~~ 286 (374)
.+...+..+++.|..-.+.+ ++.+|+.+-........+. +.++.+ +...+++...+
T Consensus 272 ----~~dvv~G~pvsgR~~~~~~~-~~~vG~fvntlplr~~~~~-~~s~~~--ll~~v~~~~~~ 327 (1304)
T 2vsq_A 272 ----SGDLAFGTVVSGRPAEIKGV-EHMVGLFINVVPRRVKLSE-GITFNG--LLKRLQEQSLQ 327 (1304)
T ss_dssp ----CSEEEEEEEECCCCTTSTTG-GGCCSSCCEEEEEEEECCT-TCBHHH--HHHHHHHHHHH
T ss_pred ----CCCEEEEEEeCCCCccchhh-hcccccceeEEEEEecCCC-CCcHHH--HHHHHHHHHHH
Confidence 35689999999997632222 3556665544433433322 345666 77777766644
No 12
>3fot_A 15-O-acetyltransferase; fusarium head blight, trichothecene mycotoxin, deoxynivaleno toxin, fusarium graminearum, coenzyme A; 1.75A {Fusarium sporotrichioides} PDB: 3fp0_A*
Probab=97.59 E-value=0.0014 Score=65.03 Aligned_cols=153 Identities=12% Similarity=-0.005 Sum_probs=94.8
Q ss_pred ceEEEEEEEeeecChhhHHHHHHHHHHHhcCCC----CCCCcccc----cccccCCC----CCCC--CCC----------
Q 041823 109 GIGLGICISHKVGDAQSFFTFVKSWAATARGEK----HTVRVEFV----SATLFPPK----NILG--FEP---------- 164 (374)
Q Consensus 109 G~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg~~----~~~~P~~~----r~~l~~~~----~~p~--~~~---------- 164 (374)
-.-|.+.+||.++||.|...|++.+=+...... ....|.++ ...|.||- ..|. ..+
T Consensus 177 ~~~lv~~~~H~~~DG~g~~~f~~~ll~~L~~~~~~~~~~~~~~~~~g~E~~~L~P~~e~~~~~p~~~~~~e~~~~~~~~~ 256 (519)
T 3fot_A 177 TVEILFHSNHLFWDGIGCRKFVGDLFRLVGSYIGRSDSREMKKIQWGQEIKNLSPPVVDSLKLDINTLGSEFDDKCTEYT 256 (519)
T ss_dssp EEEEEEEECGGGCCHHHHHHHHHHHHHHHTTSTTC-CGGGSCCCCTTTTGGGSCCCTGGGBSSCGGGCCHHHHHHHHHHH
T ss_pred eEEEEEEeCceeEchHhHHHHHHHHHHHHHhhhccCCccCCCcCCCCcccccCCcCHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 356777889999999999999999876654211 11233332 11233321 1121 000
Q ss_pred ----------C-CC-CCCCCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCCCCCCCCCceEEE
Q 041823 165 ----------S-TG-ITKQNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKPSHKTSDHRFYTI 232 (374)
Q Consensus 165 ----------~-~~-~~~~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~~~~~~~~~~~~l 232 (374)
. +. .....-....+.|++++.++|++.|+...+..+|-+.++.|.+-.++.+...... .........
T Consensus 257 ~~~~~~~~~~~~P~~~~~~~~~~~~~~ls~~~t~~L~~~ck~~~~~g~Tvt~~l~Aa~~~al~~~~~~~~-~~~~~~~~~ 335 (519)
T 3fot_A 257 SALVANYKSRGMKFQPGLALPRCVIHKLSADESIDIVKAVKTRLGPGFTISHLTQAAIVLALLDHLKPND-LSDDEVFIS 335 (519)
T ss_dssp HHHHHHHHSCCSBCCCCCCCEEEEEEECCHHHHHHHHHHHHHHTCTTCCHHHHHHHHHHHHHHHHC-----CCTTCCEEE
T ss_pred HHhhcCCCcccCCCCCCCCCcceEEEEcCHHHHHHHHHHHHhcCCCCeeHHHHHHHHHHHHHHhhcCCcc-cCCCccEEE
Confidence 0 00 1112344578899999999999999875455799999997776555555321101 012346789
Q ss_pred EEEeeCCCCCCCCCCCCCcccceeceeecc
Q 041823 233 THAVNLRTKMEPPLPDYSFGNLYRTAVTIP 262 (374)
Q Consensus 233 ~~~vd~R~r~~p~lp~~y~GN~~~~~~~~~ 262 (374)
.++||+|+.+.++.-.+|||.+........
T Consensus 336 ~~pvnlR~~l~~~~~~n~~~~~~~~~~~~v 365 (519)
T 3fot_A 336 PTSVDGRRWLREDIASNFYAMCQTAAVVRI 365 (519)
T ss_dssp EEEEECGGGBCHHHHTSCCSCCEEEEEEEE
T ss_pred EeeeeccccCCCcccccccceeeeeeeeEe
Confidence 999999999976655678888777554433
No 13
>3cla_A Type III chloramphenicol acetyltransferase; transferase (acyltransferase); HET: CLM; 1.75A {Escherichia coli} SCOP: c.43.1.1 PDB: 1cla_A* 2cla_A 4cla_A* 1cia_A 1qca_A*
Probab=78.50 E-value=1.4 Score=37.90 Aligned_cols=29 Identities=17% Similarity=0.295 Sum_probs=26.3
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhc
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATAR 138 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 138 (374)
+-|++++||.++||.-.+.|++.+.+.+.
T Consensus 181 m~lsls~DHRvvDG~~aa~Fl~~lk~~le 209 (213)
T 3cla_A 181 LPLSVQVHHAVCDGFHVARFINRLQELCN 209 (213)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEcccccChHHHHHHHHHHHHHHH
Confidence 57889999999999999999999998764
No 14
>2i9d_A Chloramphenicol acetyltransferase; structural genomics, PSI- protein structure initiative, midwest center for structural genomics; 2.30A {Bacteroides thetaiotaomicron}
Probab=77.71 E-value=1.6 Score=37.79 Aligned_cols=28 Identities=18% Similarity=0.210 Sum_probs=25.3
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHh
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATA 137 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~ 137 (374)
+-|++++||.++||.-.+.|++.+.+.+
T Consensus 189 m~lsls~DHRvvDG~~aa~Fl~~lk~~l 216 (217)
T 2i9d_A 189 MPIAMTIHHGFIDGHHLSLFYKKVEDFL 216 (217)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHH
T ss_pred EEEEEEecchhhChHHHHHHHHHHHHHh
Confidence 5788999999999999999999998764
No 15
>1q23_A Chloramphenicol acetyltransferase; CAT I, trimer, fusidic acid; HET: FUA; 2.18A {Escherichia coli} SCOP: c.43.1.1 PDB: 1noc_B 1pd5_A* 3u9b_A 3u9f_A*
Probab=77.11 E-value=1.7 Score=37.68 Aligned_cols=44 Identities=11% Similarity=0.027 Sum_probs=32.0
Q ss_pred CCceEEEEEEeecCc--eEEEEEEEeeecChhhHHHHHHHHHHHhc
Q 041823 95 ELPIGIQFNIFDCGG--IGLGICISHKVGDAQSFFTFVKSWAATAR 138 (374)
Q Consensus 95 ~P~l~vQvt~f~cgG--~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 138 (374)
.|++.+--..-+.|. +-|+++++|.++||.-.+.|++.+.+.+.
T Consensus 168 ~pIi~~G~~~~~~~r~~m~lsls~DHRvvDG~~aa~Fl~~lk~~le 213 (219)
T 1q23_A 168 APVFTMGKYYTQGDKVLMPLAIQVHHAVCDGFHVGRMLNELQQYCD 213 (219)
T ss_dssp SCEEEECCCEEETTEEEEEEEEEEETTTCCHHHHHHHHHHHHHHHH
T ss_pred eEEEecccEEEECCcEEEEEEEEEEchhhChHHHHHHHHHHHHHHh
Confidence 466654222222122 67889999999999999999999998764
No 16
>3rqc_A Probable lipoamide acyltransferase; alpha beta fold; 4.01A {Thermoplasma acidophilum dsm 1728}
Probab=73.29 E-value=2 Score=37.24 Aligned_cols=30 Identities=13% Similarity=0.197 Sum_probs=27.3
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 187 m~lsls~DHRviDGa~aa~Fl~~l~~~le~ 216 (224)
T 3rqc_A 187 MYLSLSCDHRLIDGAVATRFIVDLKKVIED 216 (224)
T ss_dssp CCEEEEEETTTSCHHHHHHHHHHHHHHHTC
T ss_pred EEEEEEeccceecHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 17
>1scz_A E2, dihydrolipoamide succinyltransferase; COA-dependent acyltransferase, CAT-like, alpha and beta (2 L mixed beta-sheeet of 6 strands; 2.20A {Escherichia coli} SCOP: c.43.1.1 PDB: 1e2o_A 1c4t_A
Probab=73.20 E-value=2.4 Score=37.05 Aligned_cols=30 Identities=13% Similarity=0.215 Sum_probs=27.3
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.++||.-.+.|++.+.+.+..
T Consensus 196 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 225 (233)
T 1scz_A 196 MYLALSYDHRLIDGRESVGFLVTIKELLED 225 (233)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999998754
No 18
>1dpb_A Dihydrolipoyl-transacetylase; dihydrolipoamide acetyltransferase; 2.50A {Azotobacter vinelandii} SCOP: c.43.1.1 PDB: 1dpd_A 1eaa_A 1eab_A* 1eac_A* 1ead_A* 1eae_A* 1eaf_A 1dpc_A
Probab=73.06 E-value=2.4 Score=37.30 Aligned_cols=30 Identities=13% Similarity=0.156 Sum_probs=27.2
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 208 m~lsls~DHRviDGa~aa~Fl~~lk~~le~ 237 (243)
T 1dpb_A 208 LPLSLSYDCRVINGAAAARFTKRLGDLLAD 237 (243)
T ss_dssp EEEEEEEETTTSCHHHHHHHHHHHHHHHHC
T ss_pred EEEEEEECcccccHHHHHHHHHHHHHHHhC
Confidence 579999999999999999999999998753
No 19
>2ii3_A Lipoamide acyltransferase component of branched-C alpha-keto acid dehydrogenase complex...; cubic core, HOMO trimer, oxidized COA-bound form; HET: CAO; 2.17A {Bos taurus} PDB: 2ihw_A* 2ii4_A* 2ii5_A*
Probab=71.63 E-value=2.7 Score=37.44 Aligned_cols=30 Identities=13% Similarity=0.349 Sum_probs=27.0
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 224 m~lsls~DHRviDGa~aa~Fl~~lk~~Le~ 253 (262)
T 2ii3_A 224 MNVSWSADHRIIDGATVSRFSNLWKSYLEN 253 (262)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEECcceecHHHHHHHHHHHHHHHhC
Confidence 568999999999999999999999988753
No 20
>3b8k_A PDCE2;, dihydrolipoyllysine-residue acetyltransferase; central beta-sheet surrounded by five alpha-helices; 8.80A {Homo sapiens}
Probab=71.45 E-value=2.1 Score=37.49 Aligned_cols=29 Identities=10% Similarity=0.189 Sum_probs=26.9
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhc
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATAR 138 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~r 138 (374)
+-|+++++|.++||.-...|++.+.+.+.
T Consensus 204 m~lsls~DHRviDGa~aa~Fl~~lk~~le 232 (239)
T 3b8k_A 204 MSVTLSCDHRVVDGAVGAQWLAEFRKYLE 232 (239)
T ss_dssp EEEEECCCCCSSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEcceeechHHHHHHHHHHHHHHh
Confidence 77999999999999999999999998764
No 21
>3mae_A 2-oxoisovalerate dehydrogenase E2 component, dihydrolipamide acetyltransferase; 2-oxoacid dehydrogenases acyltransferase; 2.50A {Listeria monocytogenes}
Probab=66.11 E-value=4.1 Score=36.07 Aligned_cols=30 Identities=20% Similarity=0.289 Sum_probs=27.4
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.+.||.-...|++.+.+.+..
T Consensus 210 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 239 (256)
T 3mae_A 210 VNLCLSIDHRILDGLLAGKFLQAIKANVEK 239 (256)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHT
T ss_pred EEEEEEEccccccHHHHHHHHHHHHHHHhC
Confidence 458999999999999999999999998764
No 22
>3l60_A Branched-chain alpha-keto acid dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: c.43.1.0
Probab=64.94 E-value=4.5 Score=35.68 Aligned_cols=30 Identities=17% Similarity=0.220 Sum_probs=27.2
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.+.||.-...|++.+.+....
T Consensus 205 m~lsLs~DHRviDGa~aa~Fl~~lk~~Le~ 234 (250)
T 3l60_A 205 MTLTCVFDHRVVDGAQVAQFMCELRDLIES 234 (250)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHHHS
T ss_pred eEEEEEecccccCHHHHHHHHHHHHHHHhC
Confidence 468999999999999999999999998754
No 23
>1x93_A Hypothetical protein HP0222; JHP0208, transcription, regula METJ, MNT, PArg, COPG, REPA; NMR {Helicobacter pylori} SCOP: a.43.1.3
Probab=50.80 E-value=15 Score=23.20 Aligned_cols=38 Identities=11% Similarity=0.197 Sum_probs=27.3
Q ss_pred EEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhc
Q 041823 174 VTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAAT 218 (374)
Q Consensus 174 ~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar 218 (374)
.+..|.|++++-+.|++.|.++ .|.+..+|=|.+.++.
T Consensus 2 ~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l 39 (55)
T 1x93_A 2 RAVSLYFSDEQYQKLEKMANEE-------EESVGSYIKRYILKAL 39 (55)
T ss_dssp EEEEEEECHHHHHHHHHHHHHT-------TSCTTHHHHHHHHHHH
T ss_pred ceEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHH
Confidence 3568999999999999999765 2334455556666554
No 24
>3dva_I Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; oxidoreductase, multienzyme complex; HET: TPW; 2.35A {Bacillus stearothermophilus} PDB: 3dv0_I* 3duf_I* 1b5s_A 1lab_A 1lac_A 1w3d_A
Probab=46.57 E-value=4.1 Score=38.97 Aligned_cols=30 Identities=10% Similarity=0.161 Sum_probs=0.0
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.++||.-...|++.+.+.+..
T Consensus 391 m~lsls~DHRviDG~~aa~Fl~~lk~~Le~ 420 (428)
T 3dva_I 391 LALSLSFDHRMIDGATAQKALNHIKRLLSD 420 (428)
T ss_dssp ------------------------------
T ss_pred EEEEEEecccccchHHHHHHHHHHHHHHhC
Confidence 358999999999999999999999988753
No 25
>2k1o_A Putative; repressor, transcriptional regulator, D binding, ribbon-helix-helix, HP0564, JHP0511, unknown funct regulation; NMR {Helicobacter pylori}
Probab=46.34 E-value=35 Score=22.30 Aligned_cols=43 Identities=12% Similarity=0.206 Sum_probs=34.1
Q ss_pred CCeEEEEEEeCHHHHHHHHHhccCCCCCCCChhhHHHHHHHHHHHHhcCC
Q 041823 171 QNVVTKRFVFTAPKIEEIRSNYTHSESCTPSRVEALSAFIWSRFVAATKP 220 (374)
Q Consensus 171 ~~~~~~~f~f~~~~l~~Lk~~~~~~~~~~~S~~d~l~A~iW~~~~~ar~~ 220 (374)
.+.-+..|.|+.++-+.|.+.|.++ .|.|..+|=|.+.++...
T Consensus 13 k~~~~Vs~Y~SkEey~~L~klA~eE-------~eSV~sfIKR~IlK~l~y 55 (66)
T 2k1o_A 13 KRNFSVTFYLSKEEHDVLRRLADEE-------VESVNSFVKRHILKTIIY 55 (66)
T ss_dssp CCCEEEEEEEEHHHHHHHHHHHHTT-------CSCHHHHHHHHHHHHHCS
T ss_pred ccceEEEEEecHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHH
Confidence 4456788999999999999999865 466777888888877643
No 26
>2xl1_A Arginine attenuator peptide; translation, antibiotic, ribosome, cytomegalovirus; NMR {Neurospora crassa}
Probab=41.01 E-value=16 Score=19.11 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=14.7
Q ss_pred CCChhhHHHHHHHHHHHH
Q 041823 199 TPSRVEALSAFIWSRFVA 216 (374)
Q Consensus 199 ~~S~~d~l~A~iW~~~~~ 216 (374)
-+++.|-++-++|+++..
T Consensus 7 vftsqdylsdhlwralna 24 (26)
T 2xl1_A 7 VFTSQDYLSDHLWRALNA 24 (26)
T ss_pred eeecHHHHHHHHHHHHhc
Confidence 367789999999998753
No 27
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=30.50 E-value=37 Score=22.73 Aligned_cols=34 Identities=15% Similarity=0.108 Sum_probs=26.3
Q ss_pred hhHHHHHHHHHHhchhhccCCCcccC----CCeeEeec
Q 041823 22 TLGNFIKQSLSEVFTCFYPLAGRIHK----DNNFIECN 55 (374)
Q Consensus 22 ~~~~~Lk~sLs~~L~~~p~LaGrl~~----~~~~i~~~ 55 (374)
+..+.+.++|...+.+-..+||.+.. +.++|..+
T Consensus 10 ddleafekalkemirqarkfagtvtytldgndleirit 47 (85)
T 2kl8_A 10 DDLEAFEKALKEMIRQARKFAGTVTYTLDGNDLEIRIT 47 (85)
T ss_dssp SSHHHHHHHHHHHHHHHTTTTCEEEEEECSSCEEEEEE
T ss_pred CcHHHHHHHHHHHHHHHHhhcceEEEEecCCeeEEEEe
Confidence 44788889999999999999999853 35666655
No 28
>2xt6_A 2-oxoglutarate decarboxylase; lyase, KDH, KGD; HET: TPP; 2.74A {Mycobacterium smegmatis}
Probab=24.66 E-value=43 Score=36.07 Aligned_cols=30 Identities=13% Similarity=0.109 Sum_probs=26.7
Q ss_pred eEEEEEEEeeecChhhHHHHHHHHHHHhcC
Q 041823 110 IGLGICISHKVGDAQSFFTFVKSWAATARG 139 (374)
Q Consensus 110 ~~l~~~~~H~v~Dg~~~~~fl~~wa~~~rg 139 (374)
+-|+++++|.|.||.-...|++.+.+.+..
T Consensus 192 m~lsls~DHRviDGa~aa~FL~~lk~~Le~ 221 (1113)
T 2xt6_A 192 ITLTSTYDHRIIQGAESGDFLRTIHQLLLD 221 (1113)
T ss_dssp EEEEEEEETTTCCHHHHHHHHHHHHHHTTC
T ss_pred eEEEEEECcceechHHHHHHHHHHHHHHhC
Confidence 679999999999999999999998887653
Done!