BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041827
(138 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5XF09|PT311_ARATH Probable sugar phosphate/phosphate translocator At3g11320
OS=Arabidopsis thaliana GN=At3g11320 PE=2 SV=1
Length = 308
Score = 177 bits (449), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 94/141 (66%), Positives = 112/141 (79%), Gaps = 7/141 (4%)
Query: 5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A AL++VLQGILLS K+NSMNLL+YMAP+A +FL+PA LIMEK+VVGITIALA+ D
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVFLLPATLIMEKNVVGITIALARDDF 227
Query: 61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
+WYL+FNS+LAYFV LTNFL HT + L KGA+AVVVSILIFRN V +TGM
Sbjct: 228 RIVWYLLFNSALAYFVNLTNFLVTKHTSALTLQVLGNAKGAVAVVVSILIFRNPVSVTGM 287
Query: 118 SGYTLTIIGVILYKEAKKQSK 138
GY+LT+ GVILY EAKK+SK
Sbjct: 288 LGYSLTVCGVILYSEAKKRSK 308
>sp|Q6DBP3|PT505_ARATH Probable sugar phosphate/phosphate translocator At5g05820
OS=Arabidopsis thaliana GN=At5g05820 PE=2 SV=1
Length = 309
Score = 169 bits (428), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 90/141 (63%), Positives = 110/141 (78%), Gaps = 7/141 (4%)
Query: 5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A AL++VLQGILLS K+NSMNLL+YMAP+A + L+PA LIMEK+VVGITIALA+ D
Sbjct: 168 ARALKSVLQGILLSSEGEKLNSMNLLLYMAPIAVVLLLPATLIMEKNVVGITIALARDDF 227
Query: 61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
+WYL+FNS+LAY V LTNFL HT + L KGA+AVVVSILIF+N V +TGM
Sbjct: 228 RIVWYLLFNSALAYLVNLTNFLVTNHTSALTLQVLGNAKGAVAVVVSILIFKNPVSVTGM 287
Query: 118 SGYTLTIIGVILYKEAKKQSK 138
GY+LT+ GVILY EAKK++K
Sbjct: 288 LGYSLTVCGVILYSEAKKRNK 308
>sp|Q9FYE5|PT504_ARATH Probable sugar phosphate/phosphate translocator At5g04160
OS=Arabidopsis thaliana GN=At5g04160 PE=2 SV=1
Length = 309
Score = 124 bits (311), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 9/142 (6%)
Query: 5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A A ++VLQGILLS K+NSMNL++YM+P+A I L+P L ME DV+ +T+ LAKQ
Sbjct: 169 ARAFKSVLQGILLSSEGEKLNSMNLMLYMSPIAVIALLPVTLFMEPDVISVTLTLAKQH- 227
Query: 61 EFLWYLIF-NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
+++W L+ NS +AY L NFL HT + L KGA+AVV+SILIF+N V + G
Sbjct: 228 QYMWILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILIFQNPVTVMG 287
Query: 117 MSGYTLTIIGVILYKEAKKQSK 138
+ GY++T++GV+ Y E K++ +
Sbjct: 288 IGGYSITVLGVVAYGETKRRFR 309
>sp|Q9SS40|PT310_ARATH Probable sugar phosphate/phosphate translocator At3g10290
OS=Arabidopsis thaliana GN=At3g10290 PE=3 SV=1
Length = 355
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 63/139 (45%), Positives = 92/139 (66%), Gaps = 7/139 (5%)
Query: 5 AWALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A A ++VLQGILLS ++NSMNL++YM+P+A I L+P + ME DV+ +T+ L +Q
Sbjct: 215 ARAFKSVLQGILLSSEGERLNSMNLMLYMSPIAVIALLPVTIFMEPDVMSVTLTLGRQHK 274
Query: 61 EFLWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
L+ NS +AY L NFL HT + L KGA+AVV+SIL+FRN V + G+
Sbjct: 275 YMYILLLVNSVMAYSANLLNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVMGI 334
Query: 118 SGYTLTIIGVILYKEAKKQ 136
GY++T++GV+ Y E K++
Sbjct: 335 GGYSITVLGVVAYGETKRR 353
>sp|Q9LDH3|PT112_ARATH Probable sugar phosphate/phosphate translocator At1g12500
OS=Arabidopsis thaliana GN=At1g12500 PE=2 SV=1
Length = 361
Score = 115 bits (289), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/139 (46%), Positives = 96/139 (69%), Gaps = 7/139 (5%)
Query: 7 ALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEF 62
AL++V+QGI+L+ K++SMNLL+YMAP+AA L+P L +E +V+ + I A+ D
Sbjct: 218 ALKSVVQGIILTSESEKLHSMNLLLYMAPMAACILLPFTLYIEGNVLRVLIEKARTDPLI 277
Query: 63 LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSG 119
++ L N+++AY V LTNFL HT + L K A+A VS+LIFRN V + G++G
Sbjct: 278 IFLLAGNATVAYLVNLTNFLVTKHTSALTLQVLGNGKAAVAAGVSVLIFRNPVTVMGIAG 337
Query: 120 YTLTIIGVILYKEAKKQSK 138
+ +TI+GV+LY EA+K+SK
Sbjct: 338 FGVTIMGVVLYSEARKRSK 356
>sp|Q9SFE9|GONS5_ARATH GDP-mannose transporter GONST5 OS=Arabidopsis thaliana GN=GONST5
PE=2 SV=1
Length = 341
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 64/134 (47%), Gaps = 9/134 (6%)
Query: 9 RTVLQGILLS--KVNSMNLLMYMAPVAAIFL-IPAVLIMEKDVVGITIALAKQDVEFLWY 65
+T+L LL K +S+N + YMAP A + L +PA L+ ++ A +
Sbjct: 176 KTILAESLLHGYKFDSINTVYYMAPFATMILGLPAFLLERNGILDWFEAHPSPWSALI-- 233
Query: 66 LIFNSS-LAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYT 121
++FNS LA+ + + F T V + + K A+AV VS +IFRN + G
Sbjct: 234 ILFNSGVLAFCLNFSIFYVIQSTTAVTFNVAGNLKVAVAVFVSWMIFRNPISPMNAVGCG 293
Query: 122 LTIIGVILYKEAKK 135
+T++G Y +
Sbjct: 294 ITLVGCTFYGYVRH 307
>sp|Q9C521|UGAL1_ARATH UDP-galactose transporter 1 OS=Arabidopsis thaliana GN=UDP-GALT1
PE=2 SV=1
Length = 336
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/139 (31%), Positives = 69/139 (49%), Gaps = 11/139 (7%)
Query: 5 AWALRTVLQGILLS--KVNSMNLLMYMAPVAAIFL-IPAVLIMEKDVVGITIALAKQDVE 61
A + +T+L LL K +S+N + YMAP A + L IPA+L+ + GI
Sbjct: 166 ATSTKTILAESLLHGYKFDSINTVYYMAPFATMILGIPALLL---EGSGILSWFEAHPAP 222
Query: 62 FLWYLIFNSS--LAYFVKLTNF--LH-TMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
+ +I SS LA+ + + F +H T V + + K A+AV+VS LIFRN +
Sbjct: 223 WSALIIILSSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVAVMVSWLIFRNPISYMN 282
Query: 117 MSGYTLTIIGVILYKEAKK 135
G +T++G Y +
Sbjct: 283 AVGCGITLVGCTFYGYVRH 301
>sp|Q9LRP2|PT317_ARATH Probable sugar phosphate/phosphate translocator At3g17430
OS=Arabidopsis thaliana GN=At3g17430 PE=2 SV=1
Length = 375
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 5 AWALRTVLQGILLSK----VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A ALR VL +LL K +N + L Y+AP + +FL ++EK + ++ +
Sbjct: 171 AEALRLVLTQVLLQKKGLTLNPITSLYYIAPCSFVFLALPWYVLEKPTMEVS------QI 224
Query: 61 EFLWYLIFNSSL-AYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
+F +++ F+++L A + + FL T V + + K I + +S +IF ITG
Sbjct: 225 QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPEST-ITG 283
Query: 117 M--SGYTLTIIGVILYKEAK 134
+ +GY + + GV++Y K
Sbjct: 284 LNITGYAIALCGVVMYNYIK 303
>sp|Q9LNH5|PT148_ARATH Probable sugar phosphate/phosphate translocator At1g48230
OS=Arabidopsis thaliana GN=At1g48230 PE=2 SV=2
Length = 367
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 72/140 (51%), Gaps = 17/140 (12%)
Query: 5 AWALRTVLQGILLSK----VNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDV 60
A ALR VL +LL K +N + L Y+AP + +FL ++EK + ++ +
Sbjct: 171 AEALRLVLTQVLLQKKGLTLNPVTSLYYIAPCSFVFLSLPWYVLEKPNIDVS------QI 224
Query: 61 EFLWYLIFNSSL-AYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITG 116
+F +++ F+++L A + + FL T V + + K I + +S +IF ITG
Sbjct: 225 QFNFWIFFSNALCALALNFSIFLVIGRTGAVTIRVAGVLKDWILIALSTVIFPEST-ITG 283
Query: 117 M--SGYTLTIIGVILYKEAK 134
+ +GY + + GV++Y K
Sbjct: 284 LNITGYAIALCGVVMYNYIK 303
>sp|Q9C8M1|PT153_ARATH Probable sugar phosphate/phosphate translocator At1g53660
OS=Arabidopsis thaliana GN=At1g53660 PE=3 SV=2
Length = 332
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 67/141 (47%), Gaps = 19/141 (13%)
Query: 7 ALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEF 62
ALR +L IL+ K+N ++L+ YM+P +AI L + +EK +K D
Sbjct: 179 ALRLILMEILVKRKGIKLNPLSLMYYMSPCSAICLFIPWIFLEK---------SKMDTWN 229
Query: 63 LWYLI--FNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIF-RNLVYITG 116
L+ NS + + L+ FL T + + + K + V+VS L+F + I
Sbjct: 230 FHVLVLSLNSLCTFALNLSVFLVISRTSALTIRIAGVVKDWLVVLVSALLFAETKLTIIN 289
Query: 117 MSGYTLTIIGVILYKEAKKQS 137
+ GY + I+GV Y K ++
Sbjct: 290 LFGYAVAIVGVATYNNHKPKN 310
>sp|O94695|YG1B_SCHPO Putative transporter C83.11 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPBC83.11 PE=1 SV=2
Length = 449
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 55/124 (44%), Gaps = 20/124 (16%)
Query: 21 NSMNLLMYMAPVAAIFLIPAVLIMEK----DVVGITIALAKQDVEFLWYLIFNSSLAYFV 76
N +NLL+Y + VA I +IP L E VG + L LI+N +F
Sbjct: 203 NKLNLLLYSSGVAFIVMIPVWLYQEGFAYLPEVGSPVFLN---------LIYNGLSHFFQ 253
Query: 77 KLTNFLHTMC-----VWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYK 131
+ F T+ V S + K +VVSI+ F+ T SG LT IG+ LY
Sbjct: 254 NILAF--TLLSIISPVAYSIASLIKRIFVIVVSIIWFQQATNFTQGSGIFLTAIGLWLYD 311
Query: 132 EAKK 135
+KK
Sbjct: 312 RSKK 315
>sp|P21727|TPT_PEA Triose phosphate/phosphate translocator, chloroplastic OS=Pisum
sativum PE=1 SV=1
Length = 402
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 69/157 (43%), Gaps = 32/157 (20%)
Query: 5 AWALRTVLQGILLSKVNSMNLLMYMAPVAAIFLIPAVLIMEKDVV---GITIALAKQD-V 60
++ R++ ++ ++S N+ Y++ +A I IP LI+E + G A+AK V
Sbjct: 253 SFTYRSIYSKKAMTDMDSTNIYAYISIIALIVCIPPALIIEGPTLLKTGFNDAIAKVGLV 312
Query: 61 EF--------LWYLIFN----SSLAYFVKLTNFLHTMCVWLSSSWKCKGAIAVVVSILIF 108
+F ++Y ++N ++L LT+ + + K + SI+IF
Sbjct: 313 KFVSDLFWVGMFYHLYNQVATNTLERVAPLTHAVGNVL---------KRVFVIGFSIIIF 363
Query: 109 RNLVYITGMSGYTLTIIGVILYK-------EAKKQSK 138
N + G + I GV LY E K+Q+K
Sbjct: 364 GNKISTQTGIGTGIAIAGVALYSFIKAQIEEEKRQAK 400
>sp|Q8C811|S35E2_MOUSE Solute carrier family 35 member E2 OS=Mus musculus GN=Slc35e2 PE=2
SV=1
Length = 405
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 62/136 (45%), Gaps = 8/136 (5%)
Query: 8 LRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPA-VLIMEKDVVGITIALAKQDVEF 62
L+ V LLS + ++ L Y + A LIPA M+ V+G + +
Sbjct: 237 LQNVFSKKLLSGDKYRFSAPELQFYTSAAAVALLIPAWTFFMDIPVIGRSGKSFSYSQDI 296
Query: 63 LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSG 119
+ L+ + +L + +T + V S + K A+++ +SI++F N + G
Sbjct: 297 VLLLLTDGALFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSIIVFGNKITSLSAIG 356
Query: 120 YTLTIIGVILYKEAKK 135
L +GV+LY +A++
Sbjct: 357 TILVTLGVLLYNKARQ 372
>sp|P0CK96|S352B_HUMAN Solute carrier family 35 member E2B OS=Homo sapiens GN=SLC35E2B
PE=2 SV=1
Length = 405
Score = 29.6 bits (65), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 31/139 (22%), Positives = 63/139 (45%), Gaps = 8/139 (5%)
Query: 8 LRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPA-VLIMEKDVVGITIALAKQDVEF 62
L+ V LLS + ++ L Y + A L+PA V + V+G + + +
Sbjct: 237 LQNVFSKKLLSGDKYRFSAPELQFYTSAAAVAMLVPARVFFTDVPVIGRSGKSFSYNQDV 296
Query: 63 LWYLIFNSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSG 119
+ L+ + L + +T + V S + K A+++ +S+++F N + G
Sbjct: 297 VLLLLTDGVLFHLQSVTAYALMGKISPVTFSVASTVKHALSIWLSVIVFGNKITSLSAVG 356
Query: 120 YTLTIIGVILYKEAKKQSK 138
L +GV+LY +A++ +
Sbjct: 357 TALVTVGVLLYNKARQHQQ 375
>sp|P54870|HMCS2_BLAGE Hydroxymethylglutaryl-CoA synthase 2 OS=Blattella germanica
GN=HMGCS-2 PE=2 SV=1
Length = 455
Score = 29.3 bits (64), Expect = 6.9, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 79 TNFLHTMCVWL-SSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIG 126
T L +W+ SSSW + AI V I I+ TG +G L +IG
Sbjct: 124 TAALFNALIWIESSSWDGRYAIVVAADIAIYAKECSPTGGAGALLMLIG 172
>sp|Q9LF61|XPT_ARATH Xylulose 5-phosphate/phosphate translocator, chloroplastic
OS=Arabidopsis thaliana GN=XPT PE=2 SV=1
Length = 417
Score = 29.3 bits (64), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 22/43 (51%)
Query: 96 KGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK 138
K + ++ ++L+FRN V G + I G LY +A + K
Sbjct: 365 KRVVVIISTVLVFRNPVRPLNALGSAIAIFGTFLYSQATAKKK 407
>sp|P0CW83|EBRB_BACAT Multidrug resistance protein EbrB OS=Bacillus atrophaeus GN=ebrB
PE=1 SV=1
Length = 117
Score = 29.3 bits (64), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 91 SSWKCKG-AIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK 138
++W G A+ +V L+F + + G+ G TL I GV++ ++K +K
Sbjct: 61 ATWSGVGTALTAIVGFLLFGETISLKGVFGLTLVIAGVVVLNQSKAPAK 109
>sp|Q7Z769|S35E3_HUMAN Solute carrier family 35 member E3 OS=Homo sapiens GN=SLC35E3 PE=2
SV=1
Length = 313
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 4/119 (3%)
Query: 19 KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEFLWYLIFNSSLAYFVKL 78
+VNSM LL Y AP+++ L+ AV E V G V L ++ + +A+ V L
Sbjct: 181 QVNSMQLLYYQAPMSSAMLLVAVPFFE-PVFGEGGIFGPWSVSALLMVLLSGVIAFMVNL 239
Query: 79 TNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAK 134
+ + +T V + K I + ++F++ + I G T+ G++ Y K
Sbjct: 240 SIYWIIGNTSPVTYNMFGHFKFCITLFGGYVLFKDPLSINQALGILCTLFGILAYTHFK 298
>sp|P0CW82|EBRB_BACSU Multidrug resistance protein EbrB OS=Bacillus subtilis (strain 168)
GN=ebrB PE=3 SV=1
Length = 117
Score = 28.9 bits (63), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 14/49 (28%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 91 SSWKCKG-AIAVVVSILIFRNLVYITGMSGYTLTIIGVILYKEAKKQSK 138
++W G A+ +V L+F + + G+ G TL I GV++ ++K ++
Sbjct: 61 ATWSGVGTALTAIVGFLLFGETISLKGVFGLTLVIAGVVVLNQSKAHAE 109
>sp|Q9LFN3|PT511_ARATH Probable sugar phosphate/phosphate translocator At5g11230
OS=Arabidopsis thaliana GN=At5g11230 PE=2 SV=1
Length = 351
Score = 28.9 bits (63), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 15/140 (10%)
Query: 7 ALRTVLQGILLS----KVNSMNLLMYMAPVAAIFLIPAVLIMEKDVVGITIALAKQDVEF 62
A R VL ILL K+N + L Y+AP FL + +E V+ T +
Sbjct: 179 ATRLVLIQILLGDKGIKLNPITSLYYVAPCCLAFLFIPWIYVEFPVLRDTSSFH------ 232
Query: 63 LWYLIF--NSSLAYFVKLTNFL---HTMCVWLSSSWKCKGAIAVVVSILIFRNLVYITGM 117
L Y IF NS A+ + L FL T + ++ + K + + S + ++ V +
Sbjct: 233 LDYAIFGANSFCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIKDTVTPINL 292
Query: 118 SGYTLTIIGVILYKEAKKQS 137
GY + +GV Y AK Q+
Sbjct: 293 FGYGIAFLGVAYYNHAKLQA 312
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.328 0.139 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 43,771,550
Number of Sequences: 539616
Number of extensions: 1453932
Number of successful extensions: 4059
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 42
Number of HSP's that attempted gapping in prelim test: 4015
Number of HSP's gapped (non-prelim): 68
length of query: 138
length of database: 191,569,459
effective HSP length: 103
effective length of query: 35
effective length of database: 135,989,011
effective search space: 4759615385
effective search space used: 4759615385
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)