Query 041829
Match_columns 486
No_of_seqs 262 out of 2784
Neff 9.5
Searched_HMMs 46136
Date Fri Mar 29 11:04:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041829.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041829hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02590 probable tyrosine dec 100.0 9.7E-94 2.1E-98 726.5 54.0 479 1-482 54-536 (539)
2 PLN02880 tyrosine decarboxylas 100.0 7.3E-89 1.6E-93 692.5 53.7 480 1-483 10-489 (490)
3 KOG0628 Aromatic-L-amino-acid/ 100.0 4.7E-86 1E-90 622.3 40.2 464 1-481 1-474 (511)
4 TIGR03799 NOD_PanD_pyr putativ 100.0 3.1E-72 6.7E-77 570.9 48.1 451 5-471 23-518 (522)
5 PF00282 Pyridoxal_deC: Pyrido 100.0 3.7E-73 8.1E-78 559.4 30.7 370 35-412 1-373 (373)
6 KOG0629 Glutamate decarboxylas 100.0 7E-72 1.5E-76 520.3 30.3 462 5-478 32-509 (510)
7 TIGR03811 tyr_de_CO2_Ent tyros 100.0 5.2E-67 1.1E-71 535.6 49.6 460 2-481 15-605 (608)
8 COG0076 GadB Glutamate decarbo 100.0 1.2E-58 2.6E-63 463.1 37.5 438 16-479 3-450 (460)
9 PLN02263 serine decarboxylase 100.0 6.1E-57 1.3E-61 445.9 38.3 359 53-478 75-443 (470)
10 TIGR01788 Glu-decarb-GAD gluta 100.0 2.8E-56 6E-61 445.6 40.1 400 43-479 14-430 (431)
11 PLN03032 serine decarboxylase; 100.0 7.4E-50 1.6E-54 391.2 35.9 356 54-475 9-373 (374)
12 PRK02769 histidine decarboxyla 100.0 4.2E-48 9.2E-53 382.0 37.4 344 76-478 21-372 (380)
13 cd06450 DOPA_deC_like DOPA dec 100.0 3.1E-44 6.6E-49 355.8 35.8 341 79-474 1-344 (345)
14 PRK13520 L-tyrosine decarboxyl 100.0 2.3E-35 5E-40 295.2 35.3 367 51-477 2-370 (371)
15 KOG1383 Glutamate decarboxylas 100.0 2.5E-35 5.4E-40 280.0 29.5 393 44-484 54-452 (491)
16 TIGR03812 tyr_de_CO2_Arch tyro 100.0 1.4E-34 3E-39 289.8 36.0 367 52-474 1-372 (373)
17 COG1104 NifS Cysteine sulfinat 100.0 1.7E-34 3.8E-39 275.2 32.7 343 77-481 2-380 (386)
18 COG0520 csdA Selenocysteine ly 100.0 1.9E-34 4E-39 285.9 33.6 352 78-477 24-404 (405)
19 TIGR00461 gcvP glycine dehydro 100.0 3.6E-32 7.9E-37 287.6 36.7 385 51-481 466-870 (939)
20 PRK04366 glycine dehydrogenase 100.0 4.5E-32 9.7E-37 277.7 34.9 398 35-482 35-452 (481)
21 PRK05367 glycine dehydrogenase 100.0 4.5E-31 9.7E-36 284.6 37.2 383 51-481 478-878 (954)
22 PRK00451 glycine dehydrogenase 100.0 6.9E-30 1.5E-34 261.4 30.4 381 34-476 31-446 (447)
23 TIGR03402 FeS_nifS cysteine de 100.0 6.5E-29 1.4E-33 249.1 31.7 340 79-480 2-374 (379)
24 PRK09295 bifunctional cysteine 100.0 1.3E-28 2.7E-33 249.1 32.1 351 78-477 25-403 (406)
25 PRK10874 cysteine sulfinate de 100.0 1.4E-28 3E-33 248.6 32.3 355 77-479 20-399 (401)
26 TIGR03392 FeS_syn_CsdA cystein 100.0 1.6E-28 3.4E-33 247.9 32.4 353 78-479 18-396 (398)
27 cd06453 SufS_like Cysteine des 100.0 1.2E-28 2.7E-33 246.7 30.4 317 107-472 34-373 (373)
28 TIGR03531 selenium_SpcS O-phos 100.0 1.1E-28 2.4E-33 245.6 29.3 319 110-475 99-443 (444)
29 TIGR01977 am_tr_V_EF2568 cyste 100.0 1.3E-28 2.7E-33 246.9 30.0 312 114-474 42-375 (376)
30 TIGR01979 sufS cysteine desulf 100.0 2.2E-28 4.8E-33 247.3 32.0 354 78-479 20-402 (403)
31 PLN02651 cysteine desulfurase 100.0 1.6E-28 3.5E-33 244.6 29.6 296 111-466 38-364 (364)
32 TIGR02006 IscS cysteine desulf 100.0 3.4E-28 7.4E-33 245.3 27.6 342 77-479 4-378 (402)
33 PLN02855 Bifunctional selenocy 100.0 2.2E-27 4.8E-32 241.2 33.7 356 77-480 33-420 (424)
34 cd06451 AGAT_like Alanine-glyo 100.0 1.5E-27 3.3E-32 237.3 29.3 341 81-476 2-355 (356)
35 PLN02414 glycine dehydrogenase 100.0 6E-27 1.3E-31 251.4 34.3 383 51-481 504-910 (993)
36 PF00266 Aminotran_5: Aminotra 100.0 1.3E-27 2.9E-32 238.8 27.5 317 107-468 34-371 (371)
37 cd00613 GDC-P Glycine cleavage 100.0 4.4E-27 9.5E-32 237.6 30.7 369 55-472 3-398 (398)
38 PRK09331 Sep-tRNA:Cys-tRNA syn 100.0 1.9E-26 4.2E-31 231.2 35.0 314 118-479 65-382 (387)
39 TIGR03403 nifS_epsilon cystein 100.0 7.6E-27 1.6E-31 234.3 32.0 309 114-480 41-377 (382)
40 PLN02409 serine--glyoxylate am 100.0 1.1E-26 2.3E-31 233.8 29.1 350 81-479 12-373 (401)
41 PRK12566 glycine dehydrogenase 100.0 2.8E-26 6.1E-31 241.4 33.0 392 49-482 477-880 (954)
42 PRK02948 cysteine desulfurase; 100.0 1.8E-26 4E-31 231.5 30.0 316 105-481 32-377 (381)
43 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 3.1E-25 6.7E-30 220.9 36.2 314 110-476 42-360 (361)
44 PRK14012 cysteine desulfurase; 100.0 5.7E-26 1.2E-30 229.4 29.2 304 116-479 49-380 (404)
45 TIGR01814 kynureninase kynuren 100.0 1.4E-25 3.1E-30 226.6 32.0 352 77-476 28-405 (406)
46 TIGR02326 transamin_PhnW 2-ami 100.0 1.1E-25 2.4E-30 224.4 29.9 347 82-476 7-360 (363)
47 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.3E-25 2.8E-30 226.8 29.9 339 78-472 19-397 (397)
48 KOG1549 Cysteine desulfurase N 99.9 4.3E-26 9.3E-31 218.4 24.2 352 73-480 40-420 (428)
49 COG0075 Serine-pyruvate aminot 99.9 2.5E-25 5.5E-30 214.3 27.7 323 109-480 31-365 (383)
50 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 3.7E-24 8E-29 213.5 34.8 310 120-478 55-368 (370)
51 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 1.6E-24 3.4E-29 215.6 31.1 346 82-475 3-354 (355)
52 PRK13479 2-aminoethylphosphona 99.9 2.5E-24 5.4E-29 215.1 30.4 349 82-479 9-364 (368)
53 PRK07179 hypothetical protein; 99.9 1.8E-23 4E-28 211.4 30.9 329 74-478 59-398 (407)
54 PLN02724 Molybdenum cofactor s 99.9 1.1E-23 2.3E-28 228.1 29.4 366 77-476 35-486 (805)
55 PTZ00094 serine hydroxymethylt 99.9 1.2E-23 2.7E-28 214.6 26.5 343 79-478 36-408 (452)
56 TIGR03235 DNA_S_dndA cysteine 99.9 2.2E-23 4.8E-28 207.0 27.6 276 111-442 37-320 (353)
57 PLN02721 threonine aldolase 99.9 4.8E-23 1E-27 204.7 29.2 305 110-477 38-351 (353)
58 TIGR01822 2am3keto_CoA 2-amino 99.9 1.6E-22 3.4E-27 204.0 32.9 297 119-479 86-390 (393)
59 PRK03080 phosphoserine aminotr 99.9 2.6E-23 5.6E-28 207.6 26.8 347 77-481 11-376 (378)
60 cd06502 TA_like Low-specificit 99.9 2.7E-23 5.8E-28 205.3 25.4 295 118-474 34-337 (338)
61 COG2008 GLY1 Threonine aldolas 99.9 2.2E-23 4.7E-28 195.0 23.1 306 103-476 26-341 (342)
62 cd06454 KBL_like KBL_like; thi 99.9 5.2E-22 1.1E-26 197.0 32.7 335 74-475 6-348 (349)
63 COG0436 Aspartate/tyrosine/aro 99.9 2.9E-22 6.3E-27 199.3 30.0 338 88-478 41-391 (393)
64 COG0156 BioF 7-keto-8-aminopel 99.9 5.4E-22 1.2E-26 193.3 29.4 336 71-475 41-387 (388)
65 PRK08361 aspartate aminotransf 99.9 5.3E-22 1.2E-26 199.7 29.6 330 90-478 48-390 (391)
66 PRK05367 glycine dehydrogenase 99.9 4.5E-22 9.8E-27 215.1 30.9 363 34-473 42-437 (954)
67 cd00609 AAT_like Aspartate ami 99.9 8.3E-22 1.8E-26 195.4 29.2 318 99-473 23-349 (350)
68 cd00378 SHMT Serine-glycine hy 99.9 5.7E-22 1.2E-26 200.5 26.2 338 79-477 21-384 (402)
69 PRK06108 aspartate aminotransf 99.9 1.9E-21 4.1E-26 195.4 29.5 329 91-477 40-381 (382)
70 PLN02414 glycine dehydrogenase 99.9 4E-21 8.6E-26 206.8 32.8 365 35-474 68-465 (993)
71 TIGR01437 selA_rel uncharacter 99.9 3.8E-21 8.2E-26 190.7 29.9 321 89-475 25-362 (363)
72 PRK05937 8-amino-7-oxononanoat 99.9 6.2E-21 1.3E-25 190.3 31.3 337 72-480 7-352 (370)
73 PLN02822 serine palmitoyltrans 99.9 2.3E-20 5E-25 191.0 36.1 311 116-481 154-480 (481)
74 PRK05764 aspartate aminotransf 99.9 7.5E-21 1.6E-25 191.7 31.4 334 91-478 47-391 (393)
75 PLN02483 serine palmitoyltrans 99.9 8.6E-21 1.9E-25 194.6 32.2 344 72-480 103-468 (489)
76 PRK13580 serine hydroxymethylt 99.9 3E-21 6.4E-26 192.5 27.4 325 107-479 86-446 (493)
77 PF02347 GDC-P: Glycine cleava 99.9 6.8E-22 1.5E-26 193.4 22.5 368 33-472 30-429 (429)
78 cd00616 AHBA_syn 3-amino-5-hyd 99.9 2.8E-21 6E-26 192.0 27.3 307 108-473 14-352 (352)
79 cd00611 PSAT_like Phosphoserin 99.9 3.8E-22 8.1E-27 197.6 20.3 336 81-475 2-353 (355)
80 COG1003 GcvP Glycine cleavage 99.9 8.1E-21 1.7E-25 179.8 28.0 328 110-483 103-452 (496)
81 PRK06939 2-amino-3-ketobutyrat 99.9 2E-20 4.3E-25 189.0 32.0 305 112-479 83-394 (397)
82 TIGR01821 5aminolev_synth 5-am 99.9 2.3E-20 4.9E-25 188.6 31.2 337 73-479 49-397 (402)
83 COG1103 Archaea-specific pyrid 99.9 2.5E-20 5.5E-25 165.6 26.9 310 111-478 60-380 (382)
84 KOG1368 Threonine aldolase [Am 99.9 2.6E-21 5.6E-26 174.2 20.4 303 106-475 50-365 (384)
85 PF01276 OKR_DC_1: Orn/Lys/Arg 99.9 7E-22 1.5E-26 193.7 18.2 285 62-402 6-329 (417)
86 PRK13034 serine hydroxymethylt 99.9 1.3E-20 2.8E-25 190.0 27.6 308 110-477 68-391 (416)
87 PTZ00377 alanine aminotransfer 99.9 1.6E-19 3.4E-24 186.1 36.1 334 105-483 108-480 (481)
88 PRK06207 aspartate aminotransf 99.9 1E-19 2.2E-24 183.7 33.9 329 93-479 58-403 (405)
89 PRK00011 glyA serine hydroxyme 99.9 1.1E-20 2.4E-25 191.8 26.5 307 111-478 66-389 (416)
90 PRK13392 5-aminolevulinate syn 99.9 4.4E-20 9.5E-25 187.0 30.2 298 113-478 92-397 (410)
91 PRK09064 5-aminolevulinate syn 99.9 9.3E-20 2E-24 184.5 32.3 338 73-479 50-398 (407)
92 PRK05355 3-phosphoserine/phosp 99.9 3.9E-21 8.4E-26 189.9 21.1 336 82-477 7-357 (360)
93 cd00615 Orn_deC_like Ornithine 99.9 1.8E-21 4E-26 187.8 18.3 228 114-392 61-294 (294)
94 PRK07324 transaminase; Validat 99.9 5.9E-20 1.3E-24 183.4 29.5 317 96-478 46-370 (373)
95 KOG2862 Alanine-glyoxylate ami 99.9 1.1E-19 2.4E-24 164.7 28.1 342 81-478 20-382 (385)
96 COG0399 WecE Predicted pyridox 99.9 6.5E-20 1.4E-24 177.3 27.9 329 91-477 15-372 (374)
97 PRK05958 8-amino-7-oxononanoat 99.9 1.4E-19 3E-24 182.1 31.5 293 115-475 83-384 (385)
98 PLN00145 tyrosine/nicotianamin 99.9 1E-19 2.3E-24 184.5 30.6 340 92-481 73-427 (430)
99 PLN03227 serine palmitoyltrans 99.9 3.3E-19 7.1E-24 178.6 33.5 346 74-480 3-384 (392)
100 PRK15029 arginine decarboxylas 99.9 1.7E-19 3.6E-24 189.3 32.4 225 123-395 212-466 (755)
101 PLN03226 serine hydroxymethylt 99.9 5.4E-20 1.2E-24 187.0 27.9 325 109-478 73-419 (475)
102 PTZ00433 tyrosine aminotransfe 99.9 3.1E-19 6.6E-24 180.7 32.9 343 89-479 51-409 (412)
103 PRK07682 hypothetical protein; 99.9 8.2E-20 1.8E-24 183.1 28.4 325 94-478 39-376 (378)
104 PLN02656 tyrosine transaminase 99.9 3.3E-19 7.1E-24 180.2 32.5 337 90-479 50-404 (409)
105 PRK11658 UDP-4-amino-4-deoxy-L 99.9 6.7E-20 1.5E-24 183.1 26.5 319 109-476 30-377 (379)
106 PLN02187 rooty/superroot1 99.9 5.1E-19 1.1E-23 180.7 33.3 344 90-483 85-443 (462)
107 PRK13393 5-aminolevulinate syn 99.9 4.1E-19 8.9E-24 179.5 32.3 337 73-479 49-397 (406)
108 TIGR00461 gcvP glycine dehydro 99.9 2.3E-19 5.1E-24 190.8 31.5 364 35-473 31-426 (939)
109 PLN02231 alanine transaminase 99.9 9.4E-19 2E-23 180.7 35.1 338 105-483 161-532 (534)
110 PLN00175 aminotransferase fami 99.9 2.8E-19 6.1E-24 180.7 30.4 329 90-477 69-412 (413)
111 TIGR01825 gly_Cac_T_rel pyrido 99.9 5.7E-19 1.2E-23 177.6 32.4 306 108-478 70-381 (385)
112 PRK13238 tnaA tryptophanase/L- 99.9 7.9E-19 1.7E-23 178.2 33.0 330 93-477 59-432 (460)
113 COG1168 MalY Bifunctional PLP- 99.9 3.9E-19 8.4E-24 166.8 28.2 334 90-477 40-385 (388)
114 TIGR01366 serC_3 phosphoserine 99.9 7.4E-20 1.6E-24 181.2 24.6 308 109-478 34-360 (361)
115 PRK06225 aspartate aminotransf 99.9 3.2E-19 7E-24 178.9 29.5 323 91-480 44-378 (380)
116 PLN02955 8-amino-7-oxononanoat 99.9 7.9E-19 1.7E-23 175.1 31.5 305 113-480 148-463 (476)
117 PRK07681 aspartate aminotransf 99.9 6.4E-19 1.4E-23 177.8 31.3 326 90-476 47-386 (399)
118 PLN02376 1-aminocyclopropane-1 99.9 7.4E-19 1.6E-23 180.5 32.0 322 108-478 90-438 (496)
119 PRK08363 alanine aminotransfer 99.9 4.7E-19 1E-23 178.8 30.0 335 90-478 48-394 (398)
120 TIGR00858 bioF 8-amino-7-oxono 99.9 7.5E-19 1.6E-23 175.1 31.0 290 117-473 62-360 (360)
121 TIGR01364 serC_1 phosphoserine 99.9 9.3E-20 2E-24 179.2 23.9 308 110-477 31-347 (349)
122 PRK13355 bifunctional HTH-doma 99.9 6.5E-19 1.4E-23 183.1 31.2 330 92-478 166-514 (517)
123 PRK06290 aspartate aminotransf 99.9 1.2E-18 2.7E-23 175.6 32.3 316 112-479 81-406 (410)
124 PRK08960 hypothetical protein; 99.9 5E-19 1.1E-23 177.9 29.1 328 90-476 47-385 (387)
125 TIGR01141 hisC histidinol-phos 99.9 3.8E-19 8.2E-24 176.2 27.8 284 115-473 57-346 (346)
126 PRK08912 hypothetical protein; 99.9 7.9E-19 1.7E-23 176.5 30.5 316 106-477 57-385 (387)
127 PRK07309 aromatic amino acid a 99.9 1.8E-18 3.8E-23 174.0 32.9 332 92-479 47-389 (391)
128 COG0403 GcvP Glycine cleavage 99.9 5.9E-19 1.3E-23 167.5 27.2 360 50-475 56-447 (450)
129 PRK07777 aminotransferase; Val 99.9 1E-18 2.2E-23 175.8 30.6 326 95-476 44-384 (387)
130 PLN00143 tyrosine/nicotianamin 99.9 2.1E-18 4.5E-23 174.4 33.0 346 89-481 50-407 (409)
131 TIGR03588 PseC UDP-4-keto-6-de 99.9 6.6E-19 1.4E-23 176.5 29.1 323 108-475 25-379 (380)
132 PRK05957 aspartate aminotransf 99.9 1.8E-18 3.9E-23 173.8 32.2 332 90-480 42-387 (389)
133 PRK09082 methionine aminotrans 99.9 4.3E-19 9.4E-24 178.2 27.6 324 92-474 47-385 (386)
134 PRK08861 cystathionine gamma-s 99.9 4.3E-19 9.4E-24 176.2 27.0 289 110-480 51-385 (388)
135 TIGR01265 tyr_nico_aTase tyros 99.8 2.4E-18 5.2E-23 173.8 32.7 341 91-478 51-401 (403)
136 PF00155 Aminotran_1_2: Aminot 99.8 2.1E-19 4.7E-24 179.2 24.1 318 105-472 37-363 (363)
137 PRK12414 putative aminotransfe 99.8 1.3E-18 2.9E-23 174.5 29.8 326 91-474 45-383 (384)
138 TIGR03537 DapC succinyldiamino 99.8 1.9E-18 4.1E-23 171.3 30.4 322 93-474 18-349 (350)
139 PRK07550 hypothetical protein; 99.8 3E-18 6.5E-23 172.2 32.1 328 90-475 44-384 (386)
140 PRK06107 aspartate aminotransf 99.8 1.6E-18 3.5E-23 175.0 29.4 338 91-479 49-401 (402)
141 TIGR01328 met_gam_lyase methio 99.8 1E-18 2.2E-23 174.7 27.5 288 110-478 57-390 (391)
142 TIGR03540 DapC_direct LL-diami 99.8 4.9E-18 1.1E-22 170.6 32.2 327 90-474 44-382 (383)
143 PRK08134 O-acetylhomoserine am 99.8 9E-19 1.9E-23 176.4 26.7 310 110-480 62-429 (433)
144 PRK07504 O-succinylhomoserine 99.8 1.4E-18 3.1E-23 174.1 27.8 234 110-412 63-318 (398)
145 PRK05942 aspartate aminotransf 99.8 5.7E-18 1.2E-22 170.6 32.2 312 106-474 67-388 (394)
146 cd00614 CGS_like CGS_like: Cys 99.8 6.2E-19 1.3E-23 175.6 24.8 285 110-476 38-368 (369)
147 PRK08133 O-succinylhomoserine 99.8 2E-18 4.3E-23 172.7 28.4 232 110-412 59-313 (390)
148 TIGR01264 tyr_amTase_E tyrosin 99.8 3.2E-18 6.9E-23 172.9 29.9 342 90-478 50-399 (401)
149 PLN02450 1-aminocyclopropane-1 99.8 5.1E-18 1.1E-22 173.7 31.7 327 108-480 82-432 (468)
150 PRK06767 methionine gamma-lyas 99.8 1.3E-18 2.9E-23 173.9 26.7 286 110-477 59-384 (386)
151 PRK08636 aspartate aminotransf 99.8 1.5E-17 3.2E-22 168.0 34.5 340 89-478 48-400 (403)
152 PRK07337 aminotransferase; Val 99.8 4.6E-18 9.9E-23 171.0 30.4 327 91-475 46-386 (388)
153 PRK05613 O-acetylhomoserine am 99.8 9.3E-19 2E-23 176.1 25.3 308 110-477 67-435 (437)
154 KOG0259 Tyrosine aminotransfer 99.8 9E-18 1.9E-22 156.5 29.4 358 76-481 70-436 (447)
155 PRK07568 aspartate aminotransf 99.8 1E-17 2.2E-22 169.2 32.6 327 90-480 45-394 (397)
156 PRK10534 L-threonine aldolase; 99.8 8.9E-19 1.9E-23 172.6 24.3 297 105-476 27-331 (333)
157 PRK06348 aspartate aminotransf 99.8 4.3E-18 9.2E-23 170.9 29.6 326 90-475 45-382 (384)
158 PF01041 DegT_DnrJ_EryC1: DegT 99.8 2.8E-18 6E-23 170.6 27.9 306 111-473 24-363 (363)
159 PRK05968 hypothetical protein; 99.8 3.5E-18 7.6E-23 170.8 28.6 246 110-434 61-324 (389)
160 PRK09028 cystathionine beta-ly 99.8 3.4E-18 7.4E-23 169.6 28.2 289 110-480 59-389 (394)
161 PRK08068 transaminase; Reviewe 99.8 8.3E-18 1.8E-22 169.2 31.4 321 93-474 50-385 (389)
162 PRK09265 aminotransferase AlaT 99.8 6.7E-18 1.4E-22 170.7 30.7 318 106-478 66-401 (404)
163 PRK08056 threonine-phosphate d 99.8 7.8E-18 1.7E-22 167.2 30.4 289 119-476 58-353 (356)
164 cd00617 Tnase_like Tryptophana 99.8 5E-18 1.1E-22 170.0 28.9 325 103-478 44-408 (431)
165 PLN02271 serine hydroxymethylt 99.8 4.9E-18 1.1E-22 170.0 28.4 329 108-477 186-539 (586)
166 PRK15400 lysine decarboxylase 99.8 3.9E-18 8.5E-23 177.1 28.8 355 62-477 135-558 (714)
167 PLN02607 1-aminocyclopropane-1 99.8 1.6E-17 3.5E-22 168.7 32.1 328 109-482 92-441 (447)
168 PRK08114 cystathionine beta-ly 99.8 3.5E-18 7.6E-23 169.0 26.4 288 110-478 60-393 (395)
169 PRK15399 lysine decarboxylase 99.8 1.7E-17 3.6E-22 172.5 32.3 355 62-477 135-558 (713)
170 TIGR01329 cysta_beta_ly_E cyst 99.8 2.8E-18 6E-23 170.9 25.4 285 110-478 45-375 (378)
171 PRK08248 O-acetylhomoserine am 99.8 2.4E-18 5.2E-23 173.5 25.0 309 110-479 62-428 (431)
172 PRK08776 cystathionine gamma-s 99.8 8.9E-18 1.9E-22 168.3 28.7 220 110-399 58-283 (405)
173 PRK14807 histidinol-phosphate 99.8 2.9E-17 6.4E-22 162.8 32.1 286 113-475 60-349 (351)
174 PLN02509 cystathionine beta-ly 99.8 4E-18 8.7E-23 172.1 26.0 216 117-399 134-355 (464)
175 PRK07050 cystathionine beta-ly 99.8 4.7E-18 1E-22 169.9 26.1 291 110-480 63-393 (394)
176 PRK09147 succinyldiaminopimela 99.8 1.4E-17 3.1E-22 167.9 29.9 325 90-476 44-394 (396)
177 PRK07683 aminotransferase A; V 99.8 1.8E-17 4E-22 166.5 30.4 328 91-478 44-383 (387)
178 PRK07812 O-acetylhomoserine am 99.8 6.3E-18 1.4E-22 170.1 26.9 311 110-480 67-433 (436)
179 PRK07811 cystathionine gamma-s 99.8 7.2E-18 1.6E-22 168.5 26.9 234 110-413 59-315 (388)
180 PRK08574 cystathionine gamma-s 99.8 5.3E-18 1.2E-22 169.0 25.9 220 109-398 50-274 (385)
181 PRK08064 cystathionine beta-ly 99.8 7.4E-18 1.6E-22 168.6 26.8 286 110-475 52-383 (390)
182 TIGR01324 cysta_beta_ly_B cyst 99.8 4.6E-18 1E-22 168.7 25.0 285 110-477 48-375 (377)
183 PLN02242 methionine gamma-lyas 99.8 1.2E-17 2.6E-22 167.8 28.3 248 110-433 74-347 (418)
184 PRK09276 LL-diaminopimelate am 99.8 2.5E-17 5.4E-22 165.6 30.5 325 90-474 46-384 (385)
185 PRK07366 succinyldiaminopimela 99.8 2E-17 4.4E-22 166.3 29.9 328 91-475 46-387 (388)
186 PRK05387 histidinol-phosphate 99.8 2.6E-17 5.5E-22 163.6 29.8 284 121-477 65-352 (353)
187 PRK13578 ornithine decarboxyla 99.8 1.4E-17 3.1E-22 173.1 28.3 302 123-477 181-564 (720)
188 PRK06836 aspartate aminotransf 99.8 5.2E-17 1.1E-21 163.6 31.3 330 90-478 48-391 (394)
189 PRK08249 cystathionine gamma-s 99.8 1.5E-17 3.2E-22 166.5 27.0 289 109-479 61-394 (398)
190 PRK07269 cystathionine gamma-s 99.8 7.3E-18 1.6E-22 166.7 24.5 234 110-412 52-288 (364)
191 PRK07810 O-succinylhomoserine 99.8 2.1E-17 4.5E-22 165.7 28.1 233 110-412 68-323 (403)
192 PRK06234 methionine gamma-lyas 99.8 3.3E-17 7.2E-22 164.5 29.6 287 110-478 62-397 (400)
193 PRK06084 O-acetylhomoserine am 99.8 1.8E-17 3.9E-22 166.9 27.3 308 110-478 56-422 (425)
194 PRK04870 histidinol-phosphate 99.8 3.5E-17 7.7E-22 162.7 29.0 311 90-475 41-355 (356)
195 TIGR01325 O_suc_HS_sulf O-succ 99.8 1.5E-17 3.3E-22 165.9 26.4 232 110-412 52-306 (380)
196 TIGR01365 serC_2 phosphoserine 99.8 4.9E-18 1.1E-22 166.9 22.3 317 109-477 32-372 (374)
197 PRK08045 cystathionine gamma-s 99.8 2.3E-17 5E-22 164.4 27.5 292 110-480 50-384 (386)
198 PRK06358 threonine-phosphate d 99.8 7.8E-17 1.7E-21 159.8 31.1 291 112-476 54-353 (354)
199 PRK06855 aminotransferase; Val 99.8 9.3E-17 2E-21 163.4 31.9 347 89-480 49-431 (433)
200 PRK05994 O-acetylhomoserine am 99.8 1.9E-17 4E-22 167.3 26.4 239 110-399 61-318 (427)
201 PRK08247 cystathionine gamma-s 99.8 2.2E-17 4.8E-22 164.0 26.1 232 110-412 50-288 (366)
202 PRK02731 histidinol-phosphate 99.8 4.7E-17 1E-21 162.6 28.6 289 115-477 70-365 (367)
203 PRK08175 aminotransferase; Val 99.8 2.2E-16 4.8E-21 159.1 33.6 334 90-478 45-389 (395)
204 PRK07503 methionine gamma-lyas 99.8 4E-17 8.6E-22 163.9 27.6 221 110-399 63-289 (403)
205 KOG1359 Glycine C-acetyltransf 99.8 3.9E-17 8.4E-22 147.0 24.4 297 115-480 111-414 (417)
206 PRK05939 hypothetical protein; 99.8 8.5E-18 1.8E-22 168.0 22.5 253 110-412 45-320 (397)
207 TIGR02080 O_succ_thio_ly O-suc 99.8 3.6E-17 7.9E-22 162.9 26.8 236 110-412 49-304 (382)
208 PRK06176 cystathionine gamma-s 99.8 2.8E-17 6.1E-22 163.5 26.0 285 109-477 47-377 (380)
209 PRK00950 histidinol-phosphate 99.8 4E-17 8.6E-22 162.7 27.2 283 115-476 72-360 (361)
210 PRK09148 aminotransferase; Val 99.8 2.1E-16 4.5E-21 159.7 32.3 326 97-480 52-392 (405)
211 PRK01688 histidinol-phosphate 99.8 1.2E-17 2.5E-22 165.6 22.6 287 119-473 60-351 (351)
212 PRK03158 histidinol-phosphate 99.8 7.3E-17 1.6E-21 160.7 28.1 289 112-475 64-358 (359)
213 TIGR02379 ECA_wecE TDP-4-keto- 99.8 1E-16 2.2E-21 159.4 28.8 314 110-476 29-375 (376)
214 PRK15481 transcriptional regul 99.8 1.3E-16 2.9E-21 162.5 29.7 303 107-477 116-430 (431)
215 TIGR03538 DapC_gpp succinyldia 99.8 2.2E-16 4.7E-21 159.1 30.8 325 89-475 42-392 (393)
216 PRK07671 cystathionine beta-ly 99.8 7.2E-17 1.6E-21 160.6 26.5 219 110-399 48-272 (377)
217 TIGR03576 pyridox_MJ0158 pyrid 99.8 1.8E-16 3.9E-21 155.8 28.7 329 54-475 8-344 (346)
218 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 8E-17 1.7E-21 160.9 26.6 309 110-476 29-374 (375)
219 PRK07908 hypothetical protein; 99.8 1.5E-16 3.4E-21 157.6 28.4 306 88-476 35-345 (349)
220 PRK06702 O-acetylhomoserine am 99.8 7.1E-17 1.5E-21 161.6 26.0 308 110-477 59-423 (432)
221 PLN02452 phosphoserine transam 99.8 9.9E-17 2.2E-21 157.7 26.4 340 78-478 7-363 (365)
222 PRK05166 histidinol-phosphate 99.8 1.8E-16 3.9E-21 158.4 28.4 286 121-476 76-369 (371)
223 PRK04635 histidinol-phosphate 99.8 5.3E-17 1.1E-21 161.2 24.1 284 114-475 62-352 (354)
224 PLN03026 histidinol-phosphate 99.8 3.4E-16 7.5E-21 156.6 29.9 286 121-475 91-379 (380)
225 PRK07582 cystathionine gamma-l 99.8 8.1E-17 1.8E-21 159.8 25.1 229 110-412 49-300 (366)
226 cd00610 OAT_like Acetyl ornith 99.8 3.8E-16 8.2E-21 158.6 30.6 315 114-475 77-412 (413)
227 PRK03317 histidinol-phosphate 99.8 5E-16 1.1E-20 155.1 30.9 295 111-477 64-363 (368)
228 PRK03244 argD acetylornithine 99.8 5.6E-16 1.2E-20 156.4 31.3 294 119-480 88-396 (398)
229 PRK09105 putative aminotransfe 99.8 3.9E-16 8.5E-21 155.6 29.6 278 123-476 85-368 (370)
230 PRK06434 cystathionine gamma-l 99.8 1.3E-16 2.8E-21 158.0 25.9 282 109-476 61-382 (384)
231 PLN02672 methionine S-methyltr 99.8 4E-16 8.6E-21 168.8 30.6 337 89-477 711-1079(1082)
232 KOG0257 Kynurenine aminotransf 99.8 2.2E-17 4.8E-22 156.7 18.4 290 80-412 36-344 (420)
233 TIGR02618 tyr_phenol_ly tyrosi 99.8 7E-16 1.5E-20 152.0 29.3 348 78-478 39-426 (450)
234 PF00464 SHMT: Serine hydroxym 99.8 1.8E-16 3.9E-21 155.1 25.0 336 79-471 22-398 (399)
235 TIGR01326 OAH_OAS_sulfhy OAH/O 99.8 2E-16 4.3E-21 159.8 26.3 240 110-400 55-312 (418)
236 PRK00854 rocD ornithine--oxo-a 99.8 1.1E-15 2.4E-20 154.4 31.8 301 111-476 82-399 (401)
237 PRK07590 L,L-diaminopimelate a 99.8 4.3E-16 9.4E-21 157.7 28.6 325 90-475 49-408 (409)
238 PRK12566 glycine dehydrogenase 99.8 9.5E-17 2.1E-21 169.9 24.4 362 35-473 46-439 (954)
239 PRK05967 cystathionine beta-ly 99.8 2.3E-16 5E-21 156.3 25.7 290 110-479 62-392 (395)
240 PRK08153 histidinol-phosphate 99.8 8.6E-16 1.9E-20 153.3 29.7 294 114-479 69-366 (369)
241 PLN02368 alanine transaminase 99.8 5.9E-16 1.3E-20 155.3 28.5 281 89-410 82-393 (407)
242 PRK06460 hypothetical protein; 99.8 4.8E-16 1E-20 154.8 27.3 287 109-478 42-374 (376)
243 COG0112 GlyA Glycine/serine hy 99.8 2E-16 4.4E-21 149.2 22.7 314 106-478 62-390 (413)
244 PRK15407 lipopolysaccharide bi 99.8 1.9E-15 4.1E-20 152.9 31.4 326 110-477 61-435 (438)
245 cd01494 AAT_I Aspartate aminot 99.8 1.8E-17 3.9E-22 146.3 14.7 166 120-315 4-170 (170)
246 COG2873 MET17 O-acetylhomoseri 99.8 7E-16 1.5E-20 143.9 25.6 313 101-477 49-424 (426)
247 TIGR01140 L_thr_O3P_dcar L-thr 99.7 4.4E-16 9.6E-21 153.0 25.3 273 119-472 50-329 (330)
248 PRK02610 histidinol-phosphate 99.7 2.3E-15 4.9E-20 150.6 30.8 318 92-479 45-372 (374)
249 PRK01533 histidinol-phosphate 99.7 6.1E-16 1.3E-20 153.9 26.4 288 112-481 64-358 (366)
250 PRK04073 rocD ornithine--oxo-a 99.7 2.2E-15 4.8E-20 151.8 30.8 298 112-476 82-395 (396)
251 PRK04781 histidinol-phosphate 99.7 1.7E-15 3.8E-20 150.7 28.6 291 115-476 62-361 (364)
252 PF01212 Beta_elim_lyase: Beta 99.7 1.9E-17 4.2E-22 157.4 13.8 252 101-405 18-281 (290)
253 PRK06425 histidinol-phosphate 99.7 2.3E-15 5E-20 148.0 28.8 282 113-476 41-331 (332)
254 PRK13237 tyrosine phenol-lyase 99.7 2.8E-15 6.1E-20 148.1 28.6 321 106-478 72-433 (460)
255 PTZ00376 aspartate aminotransf 99.7 2.1E-15 4.5E-20 152.4 28.5 327 90-477 49-402 (404)
256 PRK07505 hypothetical protein; 99.7 5.1E-15 1.1E-19 149.5 31.2 299 114-478 89-399 (402)
257 PRK03321 putative aminotransfe 99.7 1.1E-15 2.5E-20 151.6 25.9 287 112-476 57-349 (352)
258 PF01053 Cys_Met_Meta_PP: Cys/ 99.7 2E-15 4.2E-20 149.2 26.4 287 110-477 53-386 (386)
259 TIGR03246 arg_catab_astC succi 99.7 9.8E-15 2.1E-19 146.9 32.0 335 77-479 46-396 (397)
260 KOG1360 5-aminolevulinate synt 99.7 3.9E-15 8.4E-20 139.5 26.2 302 110-479 214-525 (570)
261 PTZ00125 ornithine aminotransf 99.7 2E-14 4.3E-19 145.3 33.8 313 117-480 74-397 (400)
262 PRK07865 N-succinyldiaminopime 99.7 5.6E-15 1.2E-19 147.4 28.8 309 91-473 43-363 (364)
263 TIGR00707 argD acetylornithine 99.7 8.2E-15 1.8E-19 147.1 29.3 298 117-475 70-378 (379)
264 PRK09275 aspartate aminotransf 99.7 6.9E-15 1.5E-19 150.2 28.8 368 88-485 113-524 (527)
265 TIGR01885 Orn_aminotrans ornit 99.7 4.4E-14 9.5E-19 142.7 34.3 302 119-476 82-400 (401)
266 PRK09257 aromatic amino acid a 99.7 9.2E-15 2E-19 147.4 28.9 319 91-475 47-395 (396)
267 COG1167 ARO8 Transcriptional r 99.7 3.5E-14 7.5E-19 144.8 33.2 332 91-480 107-457 (459)
268 KOG2040 Glycine dehydrogenase 99.7 3.6E-15 7.7E-20 147.2 24.0 340 109-483 575-923 (1001)
269 PRK04311 selenocysteine syntha 99.7 1.9E-14 4.2E-19 145.4 30.2 290 120-476 131-462 (464)
270 PRK07392 threonine-phosphate d 99.7 2.7E-14 5.9E-19 142.2 30.8 288 114-476 59-357 (360)
271 KOG0256 1-aminocyclopropane-1- 99.7 1E-14 2.2E-19 137.5 25.3 325 110-477 119-460 (471)
272 TIGR03539 DapC_actino succinyl 99.7 1.9E-14 4E-19 143.1 28.8 306 91-472 37-356 (357)
273 PRK12462 phosphoserine aminotr 99.7 4.4E-15 9.6E-20 144.4 23.6 338 79-478 5-362 (364)
274 PRK14809 histidinol-phosphate 99.7 3.1E-14 6.7E-19 141.6 30.1 286 112-477 65-356 (357)
275 PRK08637 hypothetical protein; 99.7 3E-14 6.5E-19 143.2 30.2 339 87-479 19-387 (388)
276 TIGR03801 asp_4_decarbox aspar 99.7 1.7E-14 3.8E-19 147.1 28.2 366 89-482 108-520 (521)
277 TIGR00474 selA seryl-tRNA(sec) 99.7 2.6E-14 5.7E-19 144.1 28.8 163 119-317 125-303 (454)
278 PRK05839 hypothetical protein; 99.7 3.7E-14 8.1E-19 141.8 29.6 315 91-477 40-373 (374)
279 COG0079 HisC Histidinol-phosph 99.7 8.3E-14 1.8E-18 136.5 31.2 288 113-477 58-353 (356)
280 PRK01278 argD acetylornithine 99.7 4.6E-14 9.9E-19 142.1 30.3 329 78-478 43-388 (389)
281 PRK09440 avtA valine--pyruvate 99.7 3.8E-14 8.2E-19 144.0 28.9 340 90-481 47-414 (416)
282 PLN02624 ornithine-delta-amino 99.7 2.5E-13 5.5E-18 139.2 34.9 306 119-478 120-444 (474)
283 PRK07049 methionine gamma-lyas 99.7 6.9E-14 1.5E-18 141.3 29.7 225 110-399 81-317 (427)
284 PRK05093 argD bifunctional N-s 99.7 2.4E-13 5.2E-18 137.3 33.0 300 120-479 86-401 (403)
285 PRK03967 histidinol-phosphate 99.7 1E-13 2.2E-18 136.6 29.4 277 112-477 55-333 (337)
286 PLN02397 aspartate transaminas 99.7 2.2E-13 4.7E-18 138.2 31.5 323 92-477 70-420 (423)
287 PRK02627 acetylornithine amino 99.7 1.5E-13 3.3E-18 138.8 30.4 303 115-479 80-395 (396)
288 PRK02936 argD acetylornithine 99.7 9.2E-14 2E-18 139.3 28.4 298 114-475 69-376 (377)
289 COG3844 Kynureninase [Amino ac 99.7 3.9E-14 8.5E-19 129.9 22.7 315 111-480 71-404 (407)
290 COG0626 MetC Cystathionine bet 99.6 1.3E-13 2.7E-18 134.6 26.9 287 110-478 61-394 (396)
291 KOG1357 Serine palmitoyltransf 99.6 1E-14 2.2E-19 139.1 18.2 338 75-478 142-502 (519)
292 PRK03715 argD acetylornithine 99.6 2E-13 4.3E-18 136.9 28.6 308 114-479 76-394 (395)
293 PRK12381 bifunctional succinyl 99.6 2.8E-13 6.1E-18 136.8 29.8 303 120-483 85-404 (406)
294 PRK14808 histidinol-phosphate 99.6 2E-13 4.2E-18 134.4 27.7 278 112-475 56-334 (335)
295 PRK11522 putrescine--2-oxoglut 99.6 9.6E-13 2.1E-17 133.9 33.4 315 115-483 123-456 (459)
296 TIGR03542 DAPAT_plant LL-diami 99.6 3.1E-13 6.6E-18 136.6 29.1 309 107-475 70-401 (402)
297 PF05889 SLA_LP_auto_ag: Solub 99.6 1.3E-13 2.7E-18 132.2 24.2 312 115-477 55-389 (389)
298 PRK05964 adenosylmethionine--8 99.6 1E-12 2.2E-17 133.4 32.4 320 115-479 84-423 (423)
299 TIGR03372 putres_am_tran putre 99.6 2.9E-12 6.2E-17 129.5 33.9 306 115-475 116-441 (442)
300 COG1982 LdcC Arginine/lysine/o 99.6 1.6E-13 3.5E-18 137.3 24.4 232 123-403 77-322 (557)
301 COG0001 HemL Glutamate-1-semia 99.6 1.1E-12 2.3E-17 127.3 29.2 338 76-481 63-431 (432)
302 PRK09264 diaminobutyrate--2-ox 99.6 2.4E-12 5.3E-17 130.5 33.4 317 116-483 82-421 (425)
303 PRK08354 putative aminotransfe 99.6 4.3E-13 9.4E-18 130.6 26.6 148 121-314 45-196 (311)
304 PRK08117 4-aminobutyrate amino 99.6 3.5E-12 7.6E-17 129.9 32.6 318 116-481 86-432 (433)
305 COG4992 ArgD Ornithine/acetylo 99.6 1.6E-12 3.5E-17 124.8 27.8 330 78-481 54-401 (404)
306 PRK06959 putative threonine-ph 99.6 1.1E-12 2.4E-17 129.3 27.5 276 119-481 56-336 (339)
307 PRK05664 threonine-phosphate d 99.6 1.4E-12 2.9E-17 128.2 27.0 267 122-478 55-328 (330)
308 PLN02760 4-aminobutyrate:pyruv 99.6 1.2E-11 2.5E-16 127.2 34.3 331 115-481 132-494 (504)
309 COG0160 GabT 4-aminobutyrate a 99.6 1.3E-11 2.9E-16 122.0 32.9 319 117-479 100-446 (447)
310 PRK08360 4-aminobutyrate amino 99.6 3.2E-11 7E-16 122.5 35.0 317 116-480 84-428 (443)
311 PRK04260 acetylornithine amino 99.6 4.7E-12 1E-16 126.8 28.5 277 143-475 87-374 (375)
312 TIGR00713 hemL glutamate-1-sem 99.5 5.9E-12 1.3E-16 128.1 29.5 310 120-478 92-422 (423)
313 PRK06541 hypothetical protein; 99.5 2.5E-11 5.3E-16 123.9 33.6 330 116-481 95-458 (460)
314 KOG0634 Aromatic amino acid am 99.5 1.4E-11 3E-16 117.6 28.9 332 106-480 94-468 (472)
315 PRK12403 putative aminotransfe 99.5 1E-10 2.3E-15 119.4 36.7 326 116-482 98-456 (460)
316 TIGR02407 ectoine_ectB diamino 99.5 1.9E-11 4.2E-16 123.3 30.8 313 115-477 77-411 (412)
317 PRK04612 argD acetylornithine 99.5 9.1E-11 2E-15 118.0 35.2 308 116-481 82-406 (408)
318 PRK06105 aminotransferase; Pro 99.5 6.1E-11 1.3E-15 121.1 33.9 330 115-481 91-452 (460)
319 PRK05769 4-aminobutyrate amino 99.5 8.4E-11 1.8E-15 119.5 34.5 314 115-479 96-440 (441)
320 PRK08593 4-aminobutyrate amino 99.5 1.5E-10 3.2E-15 117.9 36.1 320 116-481 85-432 (445)
321 PRK08088 4-aminobutyrate amino 99.5 5.5E-11 1.2E-15 120.9 32.3 315 118-478 86-423 (425)
322 PRK06062 hypothetical protein; 99.5 1.1E-10 2.5E-15 118.8 34.1 316 115-480 94-447 (451)
323 KOG0053 Cystathionine beta-lya 99.5 8.4E-12 1.8E-16 120.4 24.2 220 110-399 75-300 (409)
324 PRK05639 4-aminobutyrate amino 99.5 9.2E-11 2E-15 119.5 33.2 315 117-480 97-445 (457)
325 PLN00144 acetylornithine trans 99.5 5.2E-11 1.1E-15 119.0 30.8 302 116-478 57-380 (382)
326 PRK00062 glutamate-1-semialdeh 99.5 2.7E-11 5.9E-16 123.0 28.9 308 116-479 90-425 (426)
327 PRK06058 4-aminobutyrate amino 99.5 1.5E-10 3.3E-15 118.0 34.3 319 115-478 98-442 (443)
328 PRK13360 omega amino acid--pyr 99.5 6.5E-11 1.4E-15 120.3 31.2 325 116-479 89-441 (442)
329 KOG0630 Predicted pyridoxal-de 99.5 1.2E-12 2.7E-17 125.7 16.6 265 114-400 163-440 (838)
330 PRK07495 4-aminobutyrate amino 99.5 4.4E-10 9.6E-15 113.7 36.1 320 115-481 82-424 (425)
331 TIGR00700 GABAtrnsam 4-aminobu 99.5 2.3E-10 4.9E-15 116.1 33.5 315 117-476 77-418 (420)
332 PRK07678 aminotransferase; Val 99.5 3.8E-10 8.2E-15 115.1 34.7 327 116-479 89-450 (451)
333 KOG2467 Glycine/serine hydroxy 99.5 5.1E-11 1.1E-15 111.1 25.4 331 107-477 77-425 (477)
334 PRK09221 beta alanine--pyruvat 99.5 2E-10 4.4E-15 116.8 32.5 326 116-479 92-444 (445)
335 PRK06777 4-aminobutyrate amino 99.5 2.9E-10 6.2E-15 115.2 33.4 313 118-476 85-419 (421)
336 TIGR02617 tnaA_trp_ase tryptop 99.5 1.7E-11 3.7E-16 120.0 23.2 324 105-478 67-441 (467)
337 PRK12389 glutamate-1-semialdeh 99.5 2.2E-10 4.8E-15 116.3 32.3 303 116-478 93-427 (428)
338 PRK05965 hypothetical protein; 99.5 8E-10 1.7E-14 112.9 36.1 333 116-483 90-452 (459)
339 TIGR00709 dat 2,4-diaminobutyr 99.4 8.6E-10 1.9E-14 112.4 35.9 324 115-482 81-439 (442)
340 PRK06149 hypothetical protein; 99.4 2.5E-10 5.5E-15 126.7 34.0 319 117-478 625-970 (972)
341 PRK07036 hypothetical protein; 99.4 7.7E-10 1.7E-14 113.1 35.0 327 115-481 94-455 (466)
342 PRK04013 argD acetylornithine/ 99.4 1.6E-10 3.4E-15 114.2 28.6 283 112-480 66-362 (364)
343 PRK07482 hypothetical protein; 99.4 1.2E-09 2.5E-14 111.8 35.7 333 115-482 93-458 (461)
344 PRK00615 glutamate-1-semialdeh 99.4 2.9E-10 6.3E-15 114.9 30.9 314 115-479 92-429 (433)
345 PRK07480 putative aminotransfe 99.4 1.2E-09 2.6E-14 111.4 35.7 330 115-483 93-453 (456)
346 PLN02482 glutamate-1-semialdeh 99.4 4.7E-10 1E-14 114.4 31.5 306 115-478 138-473 (474)
347 PRK06918 4-aminobutyrate amino 99.4 1.1E-09 2.5E-14 111.9 34.5 323 115-482 96-447 (451)
348 PRK06917 hypothetical protein; 99.4 1.8E-09 3.8E-14 110.0 35.4 332 115-483 73-442 (447)
349 PRK06082 4-aminobutyrate amino 99.4 1.7E-09 3.7E-14 110.4 34.6 317 115-482 112-455 (459)
350 PRK09792 4-aminobutyrate trans 99.4 1.7E-09 3.7E-14 109.6 34.2 316 115-477 82-420 (421)
351 KOG1358 Serine palmitoyltransf 99.4 2.5E-11 5.4E-16 114.2 18.4 311 108-479 135-466 (467)
352 PRK07481 hypothetical protein; 99.4 1.8E-09 3.8E-14 110.2 33.6 333 115-479 85-446 (449)
353 TIGR00508 bioA adenosylmethion 99.4 4.2E-10 9E-15 114.1 28.9 311 118-477 90-425 (427)
354 PRK06943 adenosylmethionine--8 99.4 3.6E-09 7.9E-14 107.8 35.6 326 116-482 97-450 (453)
355 PRK06173 adenosylmethionine--8 99.4 8.8E-10 1.9E-14 111.5 30.8 316 116-479 87-426 (429)
356 PRK06148 hypothetical protein; 99.4 7.9E-10 1.7E-14 122.9 32.9 323 115-479 662-1011(1013)
357 PRK06938 diaminobutyrate--2-ox 99.4 2.7E-09 5.8E-14 109.1 32.9 325 116-481 106-463 (464)
358 KOG0258 Alanine aminotransfera 99.4 1E-09 2.3E-14 103.4 27.0 340 104-482 105-473 (475)
359 PRK07986 adenosylmethionine--8 99.4 1.2E-09 2.7E-14 110.3 29.7 315 115-477 85-422 (428)
360 PRK06916 adenosylmethionine--8 99.4 2.1E-09 4.6E-14 109.9 31.5 331 115-481 98-458 (460)
361 PRK07046 aminotransferase; Val 99.3 2E-09 4.4E-14 109.6 30.9 301 115-480 114-452 (453)
362 PRK08742 adenosylmethionine--8 99.3 5.6E-09 1.2E-13 106.8 34.1 331 116-480 107-469 (472)
363 PRK07030 adenosylmethionine--8 99.3 9.9E-09 2.1E-13 105.0 35.7 330 115-480 89-448 (466)
364 PRK07483 hypothetical protein; 99.3 6.8E-09 1.5E-13 105.6 34.0 329 116-481 73-440 (443)
365 PRK08297 L-lysine aminotransfe 99.3 3.8E-09 8.2E-14 107.5 32.1 314 120-479 96-442 (443)
366 COG3977 Alanine-alpha-ketoisov 99.3 1.2E-09 2.6E-14 99.5 24.5 329 93-480 54-413 (417)
367 PRK06931 diaminobutyrate--2-ox 99.3 1E-08 2.3E-13 104.7 34.4 322 115-481 100-457 (459)
368 TIGR00699 GABAtrns_euk 4-amino 99.3 2.7E-09 5.8E-14 108.3 29.3 313 112-475 101-463 (464)
369 PRK06209 glutamate-1-semialdeh 99.3 2.6E-09 5.6E-14 108.5 28.3 303 115-481 87-408 (431)
370 TIGR03251 LAT_fam L-lysine 6-t 99.3 7.3E-09 1.6E-13 105.2 31.5 291 142-474 105-430 (431)
371 KOG1404 Alanine-glyoxylate ami 99.3 6E-09 1.3E-13 98.6 27.6 290 142-472 111-432 (442)
372 PRK05630 adenosylmethionine--8 99.3 8.5E-09 1.8E-13 104.2 30.9 308 117-477 84-419 (422)
373 COG0161 BioA Adenosylmethionin 99.2 2.3E-08 4.9E-13 98.8 29.6 325 109-482 85-447 (449)
374 COG1932 SerC Phosphoserine ami 99.2 1E-08 2.2E-13 96.9 22.9 306 110-478 44-363 (365)
375 KOG1401 Acetylornithine aminot 99.1 1.1E-07 2.3E-12 90.9 27.6 305 142-480 118-432 (433)
376 KOG1402 Ornithine aminotransfe 99.1 5.6E-08 1.2E-12 90.0 23.8 298 114-476 103-425 (427)
377 PLN02974 adenosylmethionine-8- 99.1 5.9E-07 1.3E-11 96.8 34.4 234 218-476 567-816 (817)
378 KOG3846 L-kynurenine hydrolase 99.1 5.9E-08 1.3E-12 88.8 21.4 324 117-480 112-463 (465)
379 COG3033 TnaA Tryptophanase [Am 99.0 4.3E-07 9.4E-12 85.2 24.0 327 105-478 72-444 (471)
380 KOG2040 Glycine dehydrogenase 99.0 6.8E-08 1.5E-12 96.6 19.6 364 35-473 85-478 (1001)
381 KOG0633 Histidinol phosphate a 98.9 8.8E-08 1.9E-12 85.8 16.8 254 176-475 112-374 (375)
382 PF00202 Aminotran_3: Aminotra 98.9 7.2E-07 1.6E-11 87.8 23.2 188 115-317 58-262 (339)
383 COG1448 TyrB Aspartate/tyrosin 98.8 6.5E-06 1.4E-10 78.6 25.7 303 113-475 70-395 (396)
384 COG1921 SelA Selenocysteine sy 98.8 6.9E-07 1.5E-11 86.4 18.3 149 142-320 85-240 (395)
385 PF12897 Aminotran_MocR: Alani 98.7 7.1E-06 1.5E-10 78.5 21.6 301 123-478 76-415 (425)
386 KOG3843 Predicted serine hydro 98.6 6E-07 1.3E-11 80.7 13.0 231 114-392 55-295 (432)
387 PF06838 Met_gamma_lyase: Meth 98.5 0.0002 4.3E-09 68.4 25.6 252 113-434 55-332 (403)
388 PF03841 SelA: L-seryl-tRNA se 98.4 3.6E-07 7.9E-12 87.6 5.1 161 121-316 52-227 (367)
389 KOG2790 Phosphoserine aminotra 98.3 0.00025 5.4E-09 64.9 20.9 335 89-477 19-367 (370)
390 KOG1403 Predicted alanine-glyo 98.2 0.00036 7.9E-09 64.3 20.3 302 142-477 104-436 (452)
391 KOG1405 4-aminobutyrate aminot 97.4 0.012 2.5E-07 56.0 17.0 221 216-478 254-483 (484)
392 COG4100 Cystathionine beta-lya 97.2 0.0091 2E-07 55.4 13.0 152 115-304 68-236 (416)
393 KOG1412 Aspartate aminotransfe 97.1 0.069 1.5E-06 50.1 17.6 289 142-480 101-407 (410)
394 PF04864 Alliinase_C: Allinase 96.7 0.095 2.1E-06 50.2 15.3 296 113-475 44-362 (363)
395 KOG1411 Aspartate aminotransfe 95.5 0.17 3.7E-06 48.2 10.7 259 174-476 145-423 (427)
396 PLN02994 1-aminocyclopropane-1 93.6 0.18 3.9E-06 43.3 5.9 63 108-186 88-152 (153)
397 cd01455 vWA_F11C1-5a_type Von 73.0 13 0.00028 33.0 6.6 53 218-270 95-149 (191)
398 COG0386 BtuE Glutathione perox 71.6 37 0.00081 28.8 8.5 95 201-304 27-133 (162)
399 TIGR03679 arCOG00187 arCOG0018 69.7 70 0.0015 29.2 11.0 67 186-266 46-115 (218)
400 COG2515 Acd 1-aminocyclopropan 69.7 77 0.0017 30.3 11.1 119 142-274 65-191 (323)
401 PF06506 PrpR_N: Propionate ca 67.9 20 0.00043 31.4 6.8 70 174-267 78-147 (176)
402 cd01994 Alpha_ANH_like_IV This 62.3 1.2E+02 0.0025 27.1 11.5 101 143-267 3-118 (194)
403 PF01972 SDH_sah: Serine dehyd 59.0 67 0.0014 30.3 8.5 52 243-304 98-152 (285)
404 COG0300 DltE Short-chain dehyd 58.9 1.2E+02 0.0026 28.6 10.4 78 174-259 30-112 (265)
405 COG1066 Sms Predicted ATP-depe 58.4 1.1E+02 0.0025 30.7 10.4 132 174-318 120-274 (456)
406 TIGR03573 WbuX N-acetyl sugar 56.5 2.1E+02 0.0045 28.2 12.4 104 142-274 62-171 (343)
407 smart00642 Aamy Alpha-amylase 56.2 27 0.00058 30.4 5.4 31 243-273 63-93 (166)
408 PF00106 adh_short: short chai 54.8 88 0.0019 26.4 8.6 55 201-260 53-109 (167)
409 COG2870 RfaE ADP-heptose synth 53.1 37 0.00081 33.7 6.1 95 180-282 96-196 (467)
410 PF07071 DUF1341: Protein of u 52.9 67 0.0015 28.6 7.1 69 187-268 136-207 (218)
411 COG0329 DapA Dihydrodipicolina 52.9 21 0.00046 34.3 4.6 56 205-262 14-69 (299)
412 TIGR02189 GlrX-like_plant Glut 52.5 95 0.0021 24.2 7.5 72 174-255 8-81 (99)
413 PF08659 KR: KR domain; Inter 51.9 1E+02 0.0023 26.9 8.6 70 174-251 25-99 (181)
414 COG0367 AsnB Asparagine syntha 51.0 1.8E+02 0.004 30.6 11.5 126 114-275 212-349 (542)
415 COG0108 RibB 3,4-dihydroxy-2-b 49.0 46 0.00099 29.7 5.5 51 216-267 139-189 (203)
416 PRK11633 cell division protein 49.0 81 0.0018 28.9 7.4 51 423-475 161-213 (226)
417 PF03162 Y_phosphatase2: Tyros 48.9 29 0.00063 30.1 4.4 83 175-266 34-119 (164)
418 PRK04147 N-acetylneuraminate l 48.5 27 0.00059 33.5 4.6 55 206-262 14-69 (293)
419 TIGR01275 ACC_deam_rel pyridox 48.3 97 0.0021 29.9 8.5 55 143-207 58-113 (311)
420 TIGR02026 BchE magnesium-proto 48.1 70 0.0015 33.4 7.9 63 201-274 39-103 (497)
421 cd00951 KDGDH 5-dehydro-4-deox 47.7 62 0.0013 31.0 6.9 61 206-268 11-74 (289)
422 TIGR01244 conserved hypothetic 47.5 1.1E+02 0.0024 25.4 7.6 69 189-265 50-127 (135)
423 COG3453 Uncharacterized protei 46.9 83 0.0018 25.6 6.1 77 181-264 43-127 (130)
424 COG1748 LYS9 Saccharopine dehy 46.5 1.3E+02 0.0028 30.1 9.0 66 143-227 4-69 (389)
425 cd00950 DHDPS Dihydrodipicolin 46.4 43 0.00093 31.9 5.6 56 205-262 10-65 (284)
426 TIGR00381 cdhD CO dehydrogenas 45.2 1.3E+02 0.0028 29.9 8.5 65 190-270 182-247 (389)
427 cd00758 MoCF_BD MoCF_BD: molyb 45.1 1.2E+02 0.0025 25.1 7.4 62 184-257 20-81 (133)
428 cd00886 MogA_MoaB MogA_MoaB fa 44.9 1.2E+02 0.0027 25.6 7.7 62 186-257 23-84 (152)
429 COG1105 FruK Fructose-1-phosph 44.4 68 0.0015 31.0 6.4 60 213-273 109-169 (310)
430 TIGR01361 DAHP_synth_Bsub phos 43.1 2.9E+02 0.0063 26.0 10.6 83 184-275 120-206 (260)
431 cd00952 CHBPH_aldolase Trans-o 42.7 55 0.0012 31.7 5.8 51 212-262 23-73 (309)
432 TIGR03249 KdgD 5-dehydro-4-deo 42.6 46 0.00099 32.0 5.2 56 205-262 15-70 (296)
433 PF00926 DHBP_synthase: 3,4-di 42.6 61 0.0013 28.9 5.5 51 216-267 135-185 (194)
434 PRK03170 dihydrodipicolinate s 42.4 56 0.0012 31.3 5.7 57 204-262 10-66 (292)
435 PRK03620 5-dehydro-4-deoxygluc 41.4 56 0.0012 31.5 5.6 54 206-261 18-71 (303)
436 cd00408 DHDPS-like Dihydrodipi 40.8 46 0.00099 31.6 4.8 57 204-262 6-62 (281)
437 COG2102 Predicted ATPases of P 40.5 2.2E+02 0.0047 26.0 8.6 100 143-266 4-115 (223)
438 PRK05872 short chain dehydroge 40.0 2.6E+02 0.0057 26.5 10.1 66 177-249 36-101 (296)
439 PF00701 DHDPS: Dihydrodipicol 40.0 59 0.0013 31.0 5.5 57 212-268 16-75 (289)
440 COG0552 FtsY Signal recognitio 40.0 94 0.002 30.2 6.6 76 191-276 189-273 (340)
441 PLN02417 dihydrodipicolinate s 39.3 69 0.0015 30.5 5.8 56 205-262 11-66 (280)
442 TIGR00177 molyb_syn molybdenum 38.9 1.9E+02 0.0041 24.2 7.8 62 184-257 28-89 (144)
443 TIGR00674 dapA dihydrodipicoli 38.8 61 0.0013 30.9 5.4 58 203-262 6-63 (285)
444 PRK12481 2-deoxy-D-gluconate 3 38.4 3E+02 0.0064 25.3 9.9 42 201-247 56-97 (251)
445 PRK06114 short chain dehydroge 38.4 2.8E+02 0.0061 25.4 9.8 39 201-244 59-97 (254)
446 TIGR01536 asn_synth_AEB aspara 38.4 4.6E+02 0.01 27.0 12.6 123 114-271 235-364 (467)
447 COG0541 Ffh Signal recognition 38.2 3.9E+02 0.0085 27.2 10.7 95 175-275 129-227 (451)
448 PLN02672 methionine S-methyltr 38.0 5.2E+02 0.011 29.9 12.9 141 103-271 417-565 (1082)
449 smart00852 MoCF_biosynth Proba 38.0 1.9E+02 0.0042 23.7 7.7 61 184-256 19-79 (135)
450 PRK12595 bifunctional 3-deoxy- 38.0 3.2E+02 0.007 27.1 10.3 82 185-275 214-299 (360)
451 PF06153 DUF970: Protein of un 37.6 89 0.0019 25.0 5.1 51 422-477 10-65 (109)
452 COG1504 Uncharacterized conser 37.2 58 0.0013 25.9 3.8 49 213-269 47-95 (121)
453 PF00289 CPSase_L_chain: Carba 37.0 69 0.0015 25.6 4.5 31 242-276 53-83 (110)
454 COG1606 ATP-utilizing enzymes 36.9 54 0.0012 30.4 4.3 97 143-274 21-124 (269)
455 TIGR00506 ribB 3,4-dihydroxy-2 36.8 97 0.0021 27.8 5.8 51 216-267 140-190 (199)
456 COG0027 PurT Formate-dependent 36.7 1.2E+02 0.0025 29.3 6.5 80 177-270 77-156 (394)
457 PRK10638 glutaredoxin 3; Provi 36.4 1.7E+02 0.0038 21.5 7.2 68 175-255 3-72 (83)
458 TIGR01274 ACC_deam 1-aminocycl 36.3 2.1E+02 0.0045 28.1 8.8 56 143-208 68-131 (337)
459 TIGR00334 5S_RNA_mat_M5 ribonu 36.2 43 0.00093 29.2 3.4 53 213-276 10-62 (174)
460 PRK13396 3-deoxy-7-phosphohept 35.6 3.2E+02 0.0069 27.0 9.6 83 185-276 197-284 (352)
461 COG0296 GlgB 1,4-alpha-glucan 35.1 30 0.00064 36.8 2.7 43 231-275 197-239 (628)
462 PF05913 DUF871: Bacterial pro 35.1 52 0.0011 32.6 4.2 58 216-273 12-70 (357)
463 PF02603 Hpr_kinase_N: HPr Ser 35.0 48 0.001 27.3 3.5 47 214-268 64-110 (127)
464 COG1091 RfbD dTDP-4-dehydrorha 34.9 2.8E+02 0.006 26.4 8.8 49 214-267 36-96 (281)
465 PF05368 NmrA: NmrA-like famil 34.9 1.2E+02 0.0027 27.5 6.6 76 175-268 24-99 (233)
466 PF01301 Glyco_hydro_35: Glyco 34.8 71 0.0015 31.1 5.1 20 250-269 63-82 (319)
467 PF12818 Tegument_dsDNA: dsDNA 34.6 3.7E+02 0.0079 25.7 9.6 26 245-270 248-274 (282)
468 TIGR02667 moaB_proteo molybden 34.6 2.4E+02 0.0052 24.3 7.9 62 184-256 23-85 (163)
469 TIGR02313 HpaI-NOT-DapA 2,4-di 34.5 72 0.0016 30.6 5.1 56 204-261 9-64 (294)
470 TIGR00683 nanA N-acetylneurami 34.4 75 0.0016 30.4 5.2 56 205-262 10-66 (290)
471 PF00128 Alpha-amylase: Alpha 34.4 26 0.00057 33.4 2.1 33 241-273 43-75 (316)
472 PF01645 Glu_synthase: Conserv 33.6 2.2E+02 0.0047 28.4 8.2 81 187-276 159-241 (368)
473 cd01991 Asn_Synthase_B_C The C 33.5 3.9E+02 0.0085 24.7 10.5 106 142-273 18-126 (269)
474 COG1954 GlpP Glycerol-3-phosph 33.3 45 0.00097 28.9 3.0 48 216-274 12-61 (181)
475 PRK05876 short chain dehydroge 33.0 4E+02 0.0087 24.9 10.0 44 201-249 56-99 (275)
476 cd00954 NAL N-Acetylneuraminic 32.7 95 0.002 29.6 5.6 56 205-262 10-66 (288)
477 PF03599 CdhD: CO dehydrogenas 32.6 1.6E+02 0.0035 29.4 7.1 45 216-270 107-151 (386)
478 PRK08265 short chain dehydroge 32.5 4E+02 0.0087 24.5 9.9 60 176-244 32-91 (261)
479 cd07021 Clp_protease_NfeD_like 32.2 1.2E+02 0.0027 26.6 5.8 76 217-305 15-93 (178)
480 cd02007 TPP_DXS Thiamine pyrop 31.9 3.5E+02 0.0076 24.0 8.8 43 188-240 146-188 (195)
481 PF14488 DUF4434: Domain of un 31.7 2E+02 0.0044 24.9 7.0 56 214-269 16-84 (166)
482 PRK08057 cobalt-precorrin-6x r 31.7 44 0.00095 31.2 3.0 29 246-274 48-76 (248)
483 PRK00910 ribB 3,4-dihydroxy-2- 31.6 1.3E+02 0.0028 27.4 5.8 47 219-266 154-200 (218)
484 PF06415 iPGM_N: BPG-independe 31.3 83 0.0018 28.8 4.6 49 216-264 12-60 (223)
485 cd06007 R3H_DEXH_helicase R3H 31.2 98 0.0021 21.6 3.9 40 95-134 6-45 (59)
486 PRK09441 cytoplasmic alpha-amy 30.9 37 0.0008 35.2 2.6 30 243-272 74-103 (479)
487 PRK00014 ribB 3,4-dihydroxy-2- 30.7 1.3E+02 0.0029 27.5 5.8 49 220-270 159-207 (230)
488 TIGR01832 kduD 2-deoxy-D-gluco 30.7 4.1E+02 0.0089 24.0 9.9 40 201-245 53-92 (248)
489 PRK10494 hypothetical protein; 30.2 1.4E+02 0.003 28.1 6.1 71 118-209 138-211 (259)
490 PRK07067 sorbitol dehydrogenas 30.0 4.3E+02 0.0093 24.1 9.6 50 187-244 42-91 (257)
491 PRK01792 ribB 3,4-dihydroxy-2- 29.9 1.4E+02 0.0031 27.0 5.8 50 216-266 150-199 (214)
492 PRK04452 acetyl-CoA decarbonyl 29.6 2.7E+02 0.0057 27.1 7.9 46 214-269 136-181 (319)
493 PF04577 DUF563: Protein of un 29.3 2.9E+02 0.0063 24.3 8.0 88 219-314 86-179 (206)
494 PRK03353 ribB 3,4-dihydroxy-2- 29.2 1.5E+02 0.0032 27.1 5.8 49 220-270 154-202 (217)
495 PF02310 B12-binding: B12 bind 29.1 2.2E+02 0.0048 22.6 6.5 71 188-274 20-92 (121)
496 PF02571 CbiJ: Precorrin-6x re 28.7 53 0.0011 30.7 3.0 29 246-274 49-77 (249)
497 cd00953 KDG_aldolase KDG (2-ke 28.5 1E+02 0.0022 29.3 5.0 55 205-262 10-64 (279)
498 smart00839 ELFV_dehydrog Gluta 28.5 2.1E+02 0.0045 22.5 5.9 56 428-484 40-100 (102)
499 KOG0630 Predicted pyridoxal-de 28.5 3.3E+02 0.0072 28.0 8.4 58 420-480 638-696 (838)
500 TIGR03581 EF_0839 conserved hy 28.4 2.1E+02 0.0045 26.0 6.4 70 187-269 136-208 (236)
No 1
>PLN02590 probable tyrosine decarboxylase
Probab=100.00 E-value=9.7e-94 Score=726.51 Aligned_cols=479 Identities=70% Similarity=1.186 Sum_probs=447.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCC
Q 041829 1 MDAEQLRENAHKMVDFIADYYKSIEN----FPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQS 76 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 76 (486)
||.++||+.++++++++.+|++++.+ +||.+..+|++++..++.++|++|.+.+++++ ++.+.+.++.++|+|
T Consensus 54 m~~~~~r~~~~~~~d~i~~~~~~~~~~~~~~pv~~~~~p~~l~~~l~~~~P~~g~~~~~il~---~~~~~i~p~~~~~~h 130 (539)
T PLN02590 54 MDSELLREQGHIMVDFIADYYKNLQDSPQDFPVLSQVQPGYLRDMLPDSAPERPESLKELLD---DVSKKIMPGITHWQS 130 (539)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhhccccccCCCCCCCCChHHHHHhcCCCCCCCCCCHHHHHH---HHHHHHhccCCcCCC
Confidence 78999999999999999999999887 79999999999999999999999999999999 999999999999999
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVV 156 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~a 156 (486)
|+|+||+|++++++++++|++++.+|++...|..+|+++++|+++++|+++++|+|..|...+.++|+||+|||+||++|
T Consensus 131 P~f~a~~~~~~~~~~~lgd~l~sa~n~~~~~~~~sPa~t~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~a 210 (539)
T PLN02590 131 PSYFAYYASSTSVAGFLGEMLNAGLSVVGFTWLTSPAATELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVV 210 (539)
T ss_pred CCeeEeccCCCcHHHHHHHHHHHhcccccCCcccCchhHHHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999865433446899999999999999
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEE
Q 041829 157 LLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFF 236 (486)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~ 236 (486)
|.+||++..+..+..+.++.+||+|+++|+|+.|+|+++|+|.++++.||+|..++++||+++|+++|++++++|..|++
T Consensus 211 l~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~KAa~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~ 290 (539)
T PLN02590 211 VLAARDRILKKVGKTLLPQLVVYGSDQTHSSFRKACLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFF 290 (539)
T ss_pred HHHHHHHHHhhhcccCCCCEEEEecCCchHHHHHHHHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEE
Confidence 99999988766565666888999999999999999999999999999999986556899999999999999999999999
Q ss_pred EEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeC
Q 041829 237 LCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKD 316 (486)
Q Consensus 237 vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~ 316 (486)
|++|+|||.+|++|||++|+++|++||+|+||||||||++++++++++++.|+++|||+++|+|||+++|++||++++|+
T Consensus 291 VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~cg~llvr~ 370 (539)
T PLN02590 291 ICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAAYAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQTCSPLWVKD 370 (539)
T ss_pred EEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecchhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcCEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCe
Q 041829 317 RNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRF 396 (486)
Q Consensus 317 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~ 396 (486)
+..+.+++...++|+..........+++.+|++++|||++++++|++|+.+|.+||+++++++.++|++|.+.|++.|+|
T Consensus 371 ~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~f 450 (539)
T PLN02590 371 RYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQISLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSF 450 (539)
T ss_pred HHHHHHHhhcCHHHhCCcccccccCCCccccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCe
Confidence 98888889999999965433334467899999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 397 EVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 397 ~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+++.+|.+++||||+.|...+++..+++|.+|.++|.++|.++++++.++|+.+||+|++|+.|+++||+.+++.|.+.+
T Consensus 451 el~~~~~l~iVcFr~~~~~~~~~~~~~ln~~l~~~l~~~G~~~vs~t~~~g~~~lR~~i~n~~T~~~dv~~~~~~i~~~a 530 (539)
T PLN02590 451 EVVTTRYFSLVCFRLAPVDGDEDQCNERNRELLAAVNSTGKIFISHTALSGKFVLRFAVGAPLTEEKHVTEAWQIIQKHA 530 (539)
T ss_pred EEecCCceEEEEEEecCCCCCHHHHHHHHHHHHHHHHhCCCEEEEeeEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHH
Confidence 99999999999999987543334468899999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHh
Q 041829 477 SALLAR 482 (486)
Q Consensus 477 ~~l~~~ 482 (486)
+++.++
T Consensus 531 ~~~~~~ 536 (539)
T PLN02590 531 SKFTRN 536 (539)
T ss_pred HHhccc
Confidence 887643
No 2
>PLN02880 tyrosine decarboxylase
Probab=100.00 E-value=7.3e-89 Score=692.54 Aligned_cols=480 Identities=87% Similarity=1.356 Sum_probs=447.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCccc
Q 041829 1 MDAEQLRENAHKMVDFIADYYKSIENFPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~ 80 (486)
||.++||+.++++++++.+|+++++++||.+..+|++++..++..+|++|.+.+++++ ++.+.+.++.++++||+|+
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~pv~~~~~p~~l~~~~~~~~p~~~~~~~~~l~---~~~~~i~~~~~~~~hP~f~ 86 (490)
T PLN02880 10 MDAEQLRECGHRMVDFIADYYKSIENFPVLSQVQPGYLRELLPDSAPNQPETLDQVLD---DVQAKILPGVTHWQSPNYF 86 (490)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhccccCCCCCCCCHHHHHHhccccCCCCCCCHHHHHH---HHHHHHhcCCCCCCCCCee
Confidence 7899999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAA 160 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 160 (486)
||+++++.+++.++|++++.+|+++..|..+|..+++|+++++|+++++|+|..|...+.++|++|+|||+||++||.+|
T Consensus 87 ~~~~~~~~~~~~lad~l~~~~n~~~~~~~~sp~~~~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~A 166 (490)
T PLN02880 87 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAA 166 (490)
T ss_pred EeccCCCcHHHHHHHHHHHhhccCCcccccCcccHHHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998765444568999999999999999999
Q ss_pred HHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEe
Q 041829 161 RDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCAT 240 (486)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~ 240 (486)
|++..+..+..+.++.+||+|+.+|+|+.|+|+++|+|.++++.||+|.+++++||+++|+++|++++++|..|++||+|
T Consensus 167 R~~~~~~~g~~~~~~~vv~~S~~aH~Sv~Kaa~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvat 246 (490)
T PLN02880 167 RDRVLRKVGKNALEKLVVYASDQTHSALQKACQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCAT 246 (490)
T ss_pred HHHHHHHhcccccCCeEEEEcCCchHHHHHHHHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEe
Confidence 99887766655667889999999999999999999999999999999875568999999999999999999999999999
Q ss_pred cCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHH
Q 041829 241 VGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 241 ~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
+|||.+|++|||++|+++|++||+|+||||||||+.++++++++.+.|+++|||+++|+|||+++|++||++++|+...+
T Consensus 247 aGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~~g~llvr~~~~l 326 (490)
T PLN02880 247 VGTTSSTAVDPLLELGKIAKSNGMWFHVDAAYAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFDCSLLWVKDRNAL 326 (490)
T ss_pred cCCCcCcccCcHHHHHHHHHHcCCEEEEehhhHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCccEEEEEEeCHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998877
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
...+...++|+...........++.+|++++|||++++++|++++.+|.+|++++++++.++|+++.+.|++.|+|+++.
T Consensus 327 ~~~~~~~~~Yl~~~~~~~~~~~~~~~~~i~~~rr~~alklw~~l~~~G~~g~~~~i~~~~~lA~~~~~~l~~~~~~el~~ 406 (490)
T PLN02880 327 IQSLSTNPEFLKNKASQANSVVDYKDWQIPLGRRFRSLKLWMVLRLYGVENLQSYIRNHIKLAKEFEQLVAQDSRFEVVT 406 (490)
T ss_pred HHHHccCHHHhcCccccccCCCChhccCcCCCCcccHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEec
Confidence 78888899999765433344678889999999999999999999999999999999999999999999999999999999
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+|.+++|||++.|...+.+..+.+|.++.++|.++|.++++.+.++|+.++|+++.++.|+++|++.+++.|.++++++.
T Consensus 407 ~~~~~iv~Fr~~~~~~~~~~~~~~n~~l~~~l~~~g~~~v~~t~~~g~~~lR~~~~n~~tt~~di~~~~~~i~~~~~~~~ 486 (490)
T PLN02880 407 PRIFSLVCFRLVPPKNNEDNGNKLNHDLLDAVNSSGKIFISHTVLSGKYVLRFAVGAPLTEERHVTAAWKVLQDEASKLL 486 (490)
T ss_pred CCceEEEEEEEeCCCCChhhHHHHHHHHHHHHHhCCCEEEEEEEECCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875443445688899999999999999999999999999999999999999999999999999999887
Q ss_pred Hhh
Q 041829 481 ARL 483 (486)
Q Consensus 481 ~~~ 483 (486)
.+.
T Consensus 487 ~~~ 489 (490)
T PLN02880 487 GKS 489 (490)
T ss_pred Hhc
Confidence 643
No 3
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=100.00 E-value=4.7e-86 Score=622.27 Aligned_cols=464 Identities=53% Similarity=0.993 Sum_probs=443.2
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCccc
Q 041829 1 MDAEQLRENAHKMVDFIADYYKSIENFPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYF 80 (486)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~ 80 (486)
|+.++||+.+++|+|+|+||+++++++||.|+++|++++..+|.+.|++|+++++|++ +++..++|+.+||+||+|+
T Consensus 1 Md~~efR~~gk~mVD~IadY~e~ir~r~v~P~v~PGYl~~llP~~aPe~pE~~~~Il~---D~ekiI~PGitHw~hP~fh 77 (511)
T KOG0628|consen 1 MDSEEFREEGKEMVDYIADYLENIRKRRVLPDVKPGYLRDLLPSKAPEKPESWEDILG---DLEKIIMPGITHWQHPHFH 77 (511)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCCcchhhhhCCCCCCCChhhHHHHHH---HHHHHccCCCcccCCCcee
Confidence 8999999999999999999999999999999999999999999999999999999999 9999999999999999999
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcC--CCCCCeEEcCchhHHHHHHHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLS--SGQGGGVIQGTASEAVLVVLL 158 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~--~~~~~~~~t~ggt~a~~~al~ 158 (486)
+|+|++.+++++++|++...++.-++.|..+|+.++||..+++|+++++++|..|.. .+.++|++.+++|++++.+++
T Consensus 78 Ayfpa~~s~~siladmLs~~i~~vGFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvall 157 (511)
T KOG0628|consen 78 AYFPAGNSYPSILADMLSGGIGCVGFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALL 157 (511)
T ss_pred eEccCccchHHHHHHHHhcccccccceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998766 457899999999999999999
Q ss_pred HHHHHHHHHhCcc--------CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC
Q 041829 159 AARDKALKRVGKN--------SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI 230 (486)
Q Consensus 159 ~a~~~~~~~~~~~--------~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~ 230 (486)
+||..+..+.+.. -..+.++|+|+++|.|++|+|.+.|+ +++.+|+|. +|.|+.+.|+++|+++.++
T Consensus 158 aaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~SDqahssveka~~i~~V---klR~l~td~--n~~mr~~~L~~AIe~D~ar 232 (511)
T KOG0628|consen 158 AARTEKIEEIKSRPPELHESSVLARLVAYCSDQAHSSVEKACLIAGV---KLRALPTDE--NFGMRGDTLRKAIEEDIAR 232 (511)
T ss_pred HHHHHHHHHhhcCCCcccchhhhhhheEEecCcccchHHHhHhhcce---eEEEeeccc--CcCCCHHHHHHHHHHHHhC
Confidence 9999888775433 13688999999999999999999999 999999986 6899999999999999999
Q ss_pred CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcce
Q 041829 231 GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCS 310 (486)
Q Consensus 231 g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g 310 (486)
|.+|++|++|.|||.+.++|+|++|..||+++|+|+|||+||+|.++.||+++.+++|++.|||+.+++|||+.+...|+
T Consensus 233 GlIPf~v~at~GTT~~ca~D~l~elg~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfDCs 312 (511)
T KOG0628|consen 233 GLIPFFVCATLGTTSSCAFDELEELGPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFDCS 312 (511)
T ss_pred CCccEEEEEeecCccccccccHHHhcchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeeeee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 041829 311 ALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLV 390 (486)
Q Consensus 311 ~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l 390 (486)
.+++|+...+.++++..+-||.+..... ..|+..|.+..||||+++++|..++.+|.+++++.++++.++++.+.+.+
T Consensus 313 ~lWvkd~~~~~~~~~vdp~yL~h~~~~~--~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv 390 (511)
T KOG0628|consen 313 PLWVKDGTKLSRAFNVDPLYLKHAYQGS--APDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLV 390 (511)
T ss_pred cceeecCceeeeeeecChHhhcchhhcc--CCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999888889999999998876544 78999999999999999999999999999999999999999999999999
Q ss_pred hcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHH
Q 041829 391 AQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWE 470 (486)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~ 470 (486)
.+.+.||+.++..+++||||..+ .|+.|++|+++++.+|++.+.+..+.|+.++|++++++.++++||+..++
T Consensus 391 ~~d~~FE~~~~~~lgLvcFRlk~-------~N~~ne~Ll~~in~~g~i~l~~~~l~gk~vlRf~V~s~~t~~~di~~a~~ 463 (511)
T KOG0628|consen 391 RADPRFEIVNKRILGLVCFRLKG-------DNEINEALLNRLNSSGRIHLVPASLHGKFVLRFAVCSPLTNESDIDEAWK 463 (511)
T ss_pred hcCCcceeecccccceeEEeecC-------CcHHHHHHHHHHHhcCcEEEEEeeecceEEEEEEecCCCCcHHHHHHHHH
Confidence 99999999999999999999987 58899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 041829 471 VMQDKASALLA 481 (486)
Q Consensus 471 ~l~~~~~~l~~ 481 (486)
.|.+.+.++.+
T Consensus 464 ~I~~~a~~l~~ 474 (511)
T KOG0628|consen 464 IIFEAADELFE 474 (511)
T ss_pred HHHHHHHHHHh
Confidence 99999887553
No 4
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=100.00 E-value=3.1e-72 Score=570.94 Aligned_cols=451 Identities=24% Similarity=0.367 Sum_probs=380.8
Q ss_pred HHHHHHHHHHHHHHHHHHh--cCCCCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCccccc
Q 041829 5 QLRENAHKMVDFIADYYKS--IENFPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAY 82 (486)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~--~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~ 82 (486)
++..+.+++.+.+++|+.+ ....|+.+++.++.. ...+|++|.+.+++++ ++.+.+.++.++|+||+|+||
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~~~~~~---~~~~~~~~~~~~~~hP~f~g~ 95 (522)
T TIGR03799 23 TLGRIEQKISQNLAGFLQEHIVAIEKPLSEIEKDFS----SAEIPEQPTFVSEHTQ---FLLDKLVAHSVHTASPSFIGH 95 (522)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhccCCCchhhhhccc----ccCCCCCCCChHHHHH---HHHHHHHcCCCCCCCCCeEEe
Confidence 4445555555555554444 333366666554433 4578999999999999 988999999999999999999
Q ss_pred CCCC-CCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCC-CCCCc-----CCCCCCeEEcCchhHHHHH
Q 041829 83 YPSN-SSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKL-PEDFL-----SSGQGGGVIQGTASEAVLV 155 (486)
Q Consensus 83 ~~~~-~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~-~~~~~-----~~~~~~~~~t~ggt~a~~~ 155 (486)
++++ +.....+++ +.+.+|+|...|+.+|.++++|+++++|++++++. ++.|. ....++|++|+|||+||++
T Consensus 96 ~~~~~p~~~~~l~~-l~~~lN~n~~~~~~spa~t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~ 174 (522)
T TIGR03799 96 MTSALPYFMLPLSK-LMVALNQNLVKIETSKAFTPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANIT 174 (522)
T ss_pred ccCCCchHHHHHHH-HHHHhcCCcceeecCcchHHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHH
Confidence 9986 444445777 66689999999999999999999999999999963 22221 1123579999999999999
Q ss_pred HHHHHHHHHHHHhC------cc---------CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHH
Q 041829 156 VLLAARDKALKRVG------KN---------SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSL 220 (486)
Q Consensus 156 al~~a~~~~~~~~~------~~---------~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L 220 (486)
||++||++.++..+ .. +.++.+||+|+.+|+|+.|+++++|+|.++++.||+|.+ ++||+++|
T Consensus 175 Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~v~~S~~~H~S~~kaa~~lglg~~~v~~vp~d~~--g~~d~~~L 252 (522)
T TIGR03799 175 ALWVARNRLLKADGDFKGVAREGLFAALKHYGYDGLAILVSERGHYSLGKAADVLGIGRDNLIAIKTDAN--NRIDVDAL 252 (522)
T ss_pred HHHHHHHHhccccccccccccccchhhhhhccCCceEEEECCCchHHHHHHHHHcCCCcccEEEEEeCCC--CcCCHHHH
Confidence 99999998764321 11 235789999999999999999999999989999999864 59999999
Q ss_pred HHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecc
Q 041829 221 AEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAH 300 (486)
Q Consensus 221 ~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~h 300 (486)
+++|+++.++|.+|++|+.++|+|.+|++|||++|+++|+++|+|+|||||||++.++++++++++.+++++||+++|+|
T Consensus 253 ~~~i~~~~~~g~~~~~vvataGtt~tGaiDpl~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~H 332 (522)
T TIGR03799 253 RDKCAELAEQNIKPLAIVGVAGTTETGNIDPLDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAH 332 (522)
T ss_pred HHHHHHHHHCCCCcEEEEEEecCcCCCCcCCHHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChh
Confidence 99999998889999999999999999999999999999999999999999999999899999999999999999999999
Q ss_pred cccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHH
Q 041829 301 KWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHI 380 (486)
Q Consensus 301 K~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~ 380 (486)
||+++|++||++++|++.. .+.+...++|+.... ..++.++++++||++.++++|++++.+|.+|+++++++..
T Consensus 333 K~l~~P~g~G~llvr~~~~-~~~~~~~~~Yl~~~~-----~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~ 406 (522)
T TIGR03799 333 KQLYVPMGAGMVLFKDPAL-MSAIEHHAEYILRKG-----SKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSI 406 (522)
T ss_pred hcCCcCcccEEEEEeCHHH-HHHhccCcchhcCCC-----CCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 9999999999999999865 456777889985421 2356778999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCC--------------cccchHHHHHHHHHHHccCcEEEEeeeEC
Q 041829 381 QLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHND--------------EDHGNKLNHKLLDDINSTGKIFISHTVLS 446 (486)
Q Consensus 381 ~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~--------------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 446 (486)
+++++|.+.|++.|+|+++.+|.+++|||++.|.... ....+.+|.++.+++.++|..+++.+.++
T Consensus 407 ~la~~l~~~L~~~~~~el~~~p~l~iv~Fr~~p~~~~~~l~~~~~~~~~~~~~~~~~ln~~i~~~~~~~G~~~vs~t~l~ 486 (522)
T TIGR03799 407 EKAKYFADLIQQQPDFELVTEPELCLLTYRYVPEEVQQALAKADEEQREKINELLDRLTKFIQKRQREAGKSFVSRTRLT 486 (522)
T ss_pred HHHHHHHHHHhhCCCeEEecCCCccEEEEEEeChhhcccccccchhhhhhHHHHHHHHHHHHHHHHHhcCCEEEEEEEec
Confidence 9999999999999999999999999999999875321 12257788999999999999999988775
Q ss_pred -------CEeEEEEEecCCCCCHHHHHHHHHH
Q 041829 447 -------GKYILRFAVGAPLTEWRHVNAAWEV 471 (486)
Q Consensus 447 -------~~~~lRi~~~~~~~t~~di~~~~~~ 471 (486)
+..+||++++||.||++||+.+++.
T Consensus 487 ~~~~~g~~~~~lR~~~~np~tt~~~i~~~l~~ 518 (522)
T TIGR03799 487 PAQYDHQPTVVFRVVLANPLTTHEILQDILDE 518 (522)
T ss_pred ccccCCCCcEEEEEEecCCCCCHHHHHHHHHH
Confidence 3478999999999999999998875
No 5
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=100.00 E-value=3.7e-73 Score=559.41 Aligned_cols=370 Identities=40% Similarity=0.728 Sum_probs=331.7
Q ss_pred hhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhh
Q 041829 35 PGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAA 114 (486)
Q Consensus 35 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~ 114 (486)
|++++..++..+|++|.+.++|++ ++.+.+.++..+|+||+|+||++++++++++++|++++.+|+|...|+.+|..
T Consensus 1 P~~l~~~~~~~lp~~~~~~~~vl~---~~~~~l~~~~~~~~~P~~~~~~~~~~~~~~i~~~~l~~~~n~n~~~~~~~P~~ 77 (373)
T PF00282_consen 1 PGELRARLDEELPEEGESLEEVLK---DLREILAPGVTHWHHPRFFGFVPGGPSPASILADLLASALNQNGFTWEASPAA 77 (373)
T ss_dssp TTSSGGGCHCCHHSSHH-HHHHHH---HHHHHTHGCS-TTTSTTBESSSHT--CHHHHHHHHHHHHHT-BTTSTTTSHHH
T ss_pred ChhhhhcCccccccCCCCHHHHHH---HHHHHhhccCCCCCChhHhhhccCCccHHHHHHHHHHhhhccccccccccccc
Confidence 788899999999999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccC---CCCeEEEecCCCchhHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNS---LEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~---~~~~~v~~s~~~H~s~~~a 191 (486)
+++|+++++|+++++|+|.++...+.++|++|+|||+||++|+++||++..++.+..+ .++++||+|+.+|+|+.|+
T Consensus 78 ~~~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~Ka 157 (373)
T PF00282_consen 78 TEIEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIEKA 157 (373)
T ss_dssp HHHHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHHHH
T ss_pred ccchHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHHHh
Confidence 9999999999999999996654333468999999999999999999999887755555 4688999999999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
|.++|+ .++.||++++ ++||+++|+++|+++.++|..|++|++++|||.+|++|||++|+++|+++++|+|||||
T Consensus 158 a~~lGl---g~~~I~~~~~--~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA 232 (373)
T PF00282_consen 158 ARILGL---GVRKIPTDED--GRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAA 232 (373)
T ss_dssp HHHTTS---EEEEE-BBTT--SSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEET
T ss_pred cceeee---EEEEecCCcc--hhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeeccc
Confidence 999999 6999999974 69999999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPL 351 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (486)
|||..+++|.++++..++++|||+++|+|||+++|++||++++|++..+...+...++|+.....+.....++.++++++
T Consensus 233 ~gg~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~ 312 (373)
T PF00282_consen 233 YGGSALLSPEYRHLLFGIERADSITIDPHKWLGVPYGCGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQG 312 (373)
T ss_dssp TGGGGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS-EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSS
T ss_pred ccccccccccccccccccccccccccchhhhhcCCccceeEEeecccchHHHhccChhhhcccccccccccccccccccc
Confidence 99998899999999999999999999999999999999999999999888888889999986554445566788899999
Q ss_pred CCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEec
Q 041829 352 GRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLL 412 (486)
Q Consensus 352 sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~ 412 (486)
||+++++++|++|+.+|.+|+++++++..++|++|++.|++.|+|+++.+|.+++||||++
T Consensus 313 SR~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~~el~~~~~~~~vcFr~k 373 (373)
T PF00282_consen 313 SRRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPRFELVNEPDLNIVCFRYK 373 (373)
T ss_dssp SGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTEEESSTTSSSEEEEEES
T ss_pred cccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEcCCCceEEEEEeC
Confidence 9999999999999999999999999999999999999999999999999999999999984
No 6
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=7e-72 Score=520.35 Aligned_cols=462 Identities=24% Similarity=0.373 Sum_probs=416.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCC--CCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCccccc
Q 041829 5 QLRENAHKMVDFIADYYKSIEN--FPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAY 82 (486)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~ 82 (486)
..+.++.++++.+.+|...--+ ..+...+.|++++..+..++|+++.++++|+. +.++.+... +...||+|++.
T Consensus 32 ~te~fl~~v~~~ll~~v~~~~dr~~kv~~fhhP~~L~~l~nlel~~~~esl~qil~---~cr~tl~y~-vKTgHprffNQ 107 (510)
T KOG0629|consen 32 VTEPFLRAVVDILLDYVKKGFDRSQKVLDFHHPDELKELFNLELRDQPESLAQILE---DCRDTLKYS-VKTGHPRFFNQ 107 (510)
T ss_pred hhHhhhHHHHHHHHHhhccCCcccceeecccChHHHHHHhCcccCCChhhHHHHHH---HHHHHHHhh-hccCCCcchhh
Confidence 3467889999999999765434 46889999999999999999999999999999 777766554 56789999999
Q ss_pred CCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHH
Q 041829 83 YPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARD 162 (486)
Q Consensus 83 ~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 162 (486)
+.++.++.+..++++++..|.+...|+..|.+..+|.+++..+.++.|++.. ++|+|++||+.+|++++.+||.
T Consensus 108 l~~glD~~~Lag~wlT~t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~------~DgIf~pggsisn~Ya~~~Ary 181 (510)
T KOG0629|consen 108 LSSGLDPIGLAGEWLTSTANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEG------GDGIFAPGGSISNMYAMNCARY 181 (510)
T ss_pred hccCCCHHHHHHHHHHhccCCCCceEEecceEEeehHHHHHHHHHHhCCCCC------CCceecCCchhHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999999999874 4799999999999999999999
Q ss_pred HHHHHhC---ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEE
Q 041829 163 KALKRVG---KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCA 239 (486)
Q Consensus 163 ~~~~~~~---~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~ 239 (486)
+.+++.. ..+.|..++++|+.+|||+.|+++.+|+|.++++.|++++.| .|++++||++|.+.+++|..|++|.+
T Consensus 182 k~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~G--km~~~dLe~kile~k~kg~~Pf~vna 259 (510)
T KOG0629|consen 182 KNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERG--KMIPDDLEKKILEAKAKGGVPFFVNA 259 (510)
T ss_pred hcCchhhhhhhhcCCcEEEEecccchhhHHHHHHHhccCCceeEEecccccC--ccchHHHHHHHHHHHhcCCCCeEEEe
Confidence 9888754 445699999999999999999999999999999999999764 99999999999999999999999999
Q ss_pred ecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchH
Q 041829 240 TVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNT 319 (486)
Q Consensus 240 ~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~ 319 (486)
|+|||+.|++|||+.|+++|++|++|+||||||||+.+++..+++++.|++++||++++|||++++|..||.+++|....
T Consensus 260 TaGTTV~GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gaplqCsa~l~r~~gl 339 (510)
T KOG0629|consen 260 TAGTTVLGAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAPLQCSAFLTREEGL 339 (510)
T ss_pred cCCceeeeccCcHHHHHHHHHhcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCcchhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
+.++.+..+.|++++.......+|.++..++|||+...+++|..|++-|..|+++.++++.++|+||.++|++.++++++
T Consensus 340 l~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~~~l 419 (510)
T KOG0629|consen 340 LQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGFEML 419 (510)
T ss_pred HHhhcccchhhhhccCceeecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccceeh
Confidence 88888999999998876666678889999999999999999999999999999999999999999999999999998876
Q ss_pred c--CCCceEEEEEecCCCCC--------cccchHHHHHHHHHHHccCcEEEEeeeECC-EeEEEEEecCCCCCHHHHHHH
Q 041829 400 T--PRIFSLVCFRLLPPHND--------EDHGNKLNHKLLDDINSTGKIFISHTVLSG-KYILRFAVGAPLTEWRHVNAA 468 (486)
Q Consensus 400 ~--~~~~~~v~f~~~~~~~~--------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~-~~~lRi~~~~~~~t~~di~~~ 468 (486)
. +|+...|||++.|+... ......+...+..++.++|...++..+... ..++|+.+.++..+.+|+|.+
T Consensus 420 ~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~Mi~YqPl~~~~nffr~v~sn~a~~~ad~dfl 499 (510)
T KOG0629|consen 420 FELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTMIGYQPLGDKPNFFRMVISNPALTEADLDFL 499 (510)
T ss_pred hcCCCceEEEeeccCchHhccCcccchhhhHHHhhCcHHHHHHHhccceeeEecccccccchhheecccchhhhhhHHHH
Confidence 5 47888999999876421 112233445677788999998888876654 358999999999999999999
Q ss_pred HHHHHHHHHH
Q 041829 469 WEVMQDKASA 478 (486)
Q Consensus 469 ~~~l~~~~~~ 478 (486)
++.|+.+.+.
T Consensus 500 ldEIerlgq~ 509 (510)
T KOG0629|consen 500 LDEIERLGQD 509 (510)
T ss_pred HHHHHHhccC
Confidence 9999988654
No 7
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=100.00 E-value=5.2e-67 Score=535.59 Aligned_cols=460 Identities=21% Similarity=0.266 Sum_probs=383.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCC-CCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCC-cc
Q 041829 2 DAEQLRENAHKMVDFIADYYKSIENFPV-LSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSP-NY 79 (486)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p-~~ 79 (486)
|.+.|++.+.++++...+++.+. .|- .+.++|++++. ..+.+...+++++++ ++.+.+.++.++|+|| ||
T Consensus 15 n~~~~~~~~~~~~~~~~~~r~~~--~p~d~~~~~~~~~~~---~~~~~~~~~~~~~l~---~l~~~l~~~sv~~~~P~ry 86 (608)
T TIGR03811 15 NGQLYKDLLNKLVDEHLGWRQNY--MPQDKPVISPQERTS---KSFTKTVNNMKDVLD---ELSSRLRTESVPWHSAGRY 86 (608)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhc--CCCCCCCCCHHHhcc---cccccCccCHHHHHH---HHHHHHhcCCCCCCCccce
Confidence 56789999999999999998883 332 14566666654 345555678999999 9999999999999999 99
Q ss_pred cccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHH
Q 041829 80 FAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLA 159 (486)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~ 159 (486)
+||+++++.+|+++++++++.+|+|...|+.+|.++.+|+++.+|+++++|++.. +|+||+|||+||++||++
T Consensus 87 ~ghm~~~~~~paila~~~a~~~N~n~~~~e~SP~~t~lE~~vi~~la~l~G~~~~-------~G~~TsGGT~ANl~aL~~ 159 (608)
T TIGR03811 87 WGHMNSETLMPAILAYNYAMLWNGNNVAYESSPATSQMEEEVGKEFATLMGYKNG-------WGHIVADGSLANLEGLWY 159 (608)
T ss_pred EEECcCCCCHHHHHHHHHHHHhCCCCCccccCchHHHHHHHHHHHHHHHhCCCCC-------CeEEeCChHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999874 589999999999999999
Q ss_pred HHHHHH-H----HhC---------------------------------------c--cCCCCe-EEEecCCCchhHHHHH
Q 041829 160 ARDKAL-K----RVG---------------------------------------K--NSLEKL-VVYASDQTHSALQKAC 192 (486)
Q Consensus 160 a~~~~~-~----~~~---------------------------------------~--~~~~~~-~v~~s~~~H~s~~~a~ 192 (486)
||+.+. + ... . ....+. ++++|+.+|+|+.|++
T Consensus 160 AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~KAa 239 (608)
T TIGR03811 160 ARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESAGDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWLKAA 239 (608)
T ss_pred HHHhhhccchhhhccccccccccchhhcccccccccccccccccchhhhhhhccccccccccceEEEECCCccHHHHHHH
Confidence 999641 1 100 0 001122 7899999999999999
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHH---HHhCC--EEE
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIA---KSNGM--WFH 267 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia---~~~g~--~lh 267 (486)
.++|+|.++++.||+|.+ ++||+++|+++|+++.++|..|++||+|+|||.+|+||||++|+++| +++|+ |+|
T Consensus 240 ~ilGlG~~~vv~VpvD~~--~rmd~~~L~~~I~~~~~~g~p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lH 317 (608)
T TIGR03811 240 DIIGIGLDQVIPVPVDSN--YRMDINELEKIIRKLAAEKTPILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLH 317 (608)
T ss_pred HHcCCCcccEEEeecCCC--CcCCHHHHHHHHHHHHhcCCCeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEe
Confidence 999999999999999864 69999999999999999999999999999999999999999999999 67887 699
Q ss_pred eeccccchh--ccC------------------------------ccchhcccCCcCCCceeeecccccCCCCcceEEEEe
Q 041829 268 VDAAYAGSA--CIC------------------------------PEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVK 315 (486)
Q Consensus 268 vD~A~g~~~--~~~------------------------------~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r 315 (486)
|||||||++ +++ +++++.+.++++|||+++|+|||+++|++||++++|
T Consensus 318 VDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~~G~ll~R 397 (608)
T TIGR03811 318 VDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKKEYISREVYNAYKAISEAESVTIDPHKMGYIPYSAGGIVIQ 397 (608)
T ss_pred eeccccchhhhhhccccccccccchhhcccccccccccccccccHhHHHHHhcCcCceEEEeCcccccccCCCeEEEEEe
Confidence 999999965 222 345667889999999999999999999999999999
Q ss_pred CchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 316 DRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 316 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
++. +.+.+...++|+.....+. ......++++++|+ ++++++|++++.+ |.+||.+++++++++|+++.+.|++
T Consensus 398 d~~-~~~~~~~~a~Yl~~~~~~~--p~~~g~~~legSR~ga~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~ 474 (608)
T TIGR03811 398 DIR-MRDVISYFATYVFEKGADI--PALLGAYILEGSKAGATAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNN 474 (608)
T ss_pred CHH-HHHHHhcCcchhccccccC--cccccccceecCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 996 6678888999997533211 11346678888886 6799999999998 9999999999999999999999988
Q ss_pred ------CCCeEE--ecCCCceEEEEEecCCCCC-cccchHHHHHHHHHHHc------cCcEEEEeeeEC-----------
Q 041829 393 ------DLRFEV--VTPRIFSLVCFRLLPPHND-EDHGNKLNHKLLDDINS------TGKIFISHTVLS----------- 446 (486)
Q Consensus 393 ------~~~~~~--~~~~~~~~v~f~~~~~~~~-~~~~~~~~~~l~~~l~~------~g~~~~~~~~~~----------- 446 (486)
.|+|++ +.+|++++|||++.+.+.+ ....+++|+++.+++.- ...+.++.|.+.
T Consensus 475 ~~~~~~~~~~el~~~~~pdlniV~Fr~~~~g~~~l~~~n~ln~~i~~~~~~~~g~~~~~~~~~s~t~~~~~~yg~~~~~~ 554 (608)
T TIGR03811 475 LEFKVGDKEIEVHPLTKPDFNMVDYVFNEKGNDDLVKMNKLNHAFYDYASYVKGSIYNNEFITSHTDFAIPDYGDSPFAF 554 (608)
T ss_pred cccccCCCCeeEEecCCCCcceEEEEEecCCCccHHHHHHHHHHHHHhhccccCCCCCcceEeeecccccchhhhhHHHH
Confidence 466777 7799999999999877643 25678999999998761 222345544321
Q ss_pred ---------------CEeEEEEEecCCCCCH-HHHHHHHHHHHHHHHHHHH
Q 041829 447 ---------------GKYILRFAVGAPLTEW-RHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 447 ---------------~~~~lRi~~~~~~~t~-~di~~~~~~l~~~~~~l~~ 481 (486)
.-.++|.++|+|+.++ +.++.+++.|++..++.++
T Consensus 555 ~~~~~~~~~~~~~~~~~~~lr~~~m~p~~~~~~~~~~~~~~~~~~~~~~~~ 605 (608)
T TIGR03811 555 VNSLGFSDEEWQRAGKVTILRASVMTPYMNDKENFDEYAPKIKAAMQEKLE 605 (608)
T ss_pred HHHcCCChhhhccCCceEEEEEEecCcccCChhhHHHHHHHHHHHHHHHHH
Confidence 1368999999998776 6688888888888766543
No 8
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-58 Score=463.06 Aligned_cols=438 Identities=25% Similarity=0.307 Sum_probs=354.9
Q ss_pred HHHHHHHhcCCCCCCCCCChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHh-hcCCCCcCCCCcccccCCCCCCHHHHHH
Q 041829 16 FIADYYKSIENFPVLSQVQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEK-ILPGVTHWQSPNYFAYYPSNSSVAGFLG 94 (486)
Q Consensus 16 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 94 (486)
.+.+++.....++..+...|-.-.......+|+.+.+.++++. ++... +.+...++.||++..|..+.+.++..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~g~p~~~v~~---~l~~~~~~d~~~~~~~p~~~~~~~~~~~~~~~a~ 79 (460)
T COG0076 3 GLIDKDMLNSKRYSGDSLSPLFGALSDSRMAPEKGEPLEEVLD---ELAELLIKDELYLDGHPRANLAGFCPTRVPPVAA 79 (460)
T ss_pred hHHHHHHhhccCCCccccccchhhhhhhccCCccCCchhhHHH---HHHHHhhcccccccCCcceEEEccCCCCCHHHHH
Confidence 4555555556656556666665556666789999999999999 88877 4444445559999999999999999999
Q ss_pred HHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc-cC-
Q 041829 95 EMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK-NS- 172 (486)
Q Consensus 95 ~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~-~~- 172 (486)
+.+..++++|...|+.+|+++++|+++++|+++++|++.+ ..|+||+|||+||++|++++|+++.+.... .+
T Consensus 80 ~~~~~~~~~nl~d~~~~p~a~~~E~~~v~~l~~l~~~~~~------~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~ 153 (460)
T COG0076 80 ELLVSALNKNLGDPDESPAAAELEERVVNMLSDLLGAPEE------ASGTFTSGGTEANLLALLAARERWRKRALAESGK 153 (460)
T ss_pred HHHHHHHhhcCCCcccChhHHHHHHHHHHHHHHHhCCCCC------CceEEEcChHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 9999999999999999999999999999999999999765 369999999999999999999998754322 11
Q ss_pred -CCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC
Q 041829 173 -LEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP 251 (486)
Q Consensus 173 -~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~ 251 (486)
.+.++|++|..+|+|+.|+++++|+ .++.+|+++. +++||+++|+++|++++..| +||+++|||++|.+||
T Consensus 154 ~~~~P~ii~s~~aH~s~~Kaa~~lG~---~~~~v~~~~~-~~~id~~~l~~~i~~~t~~g----~vV~~aGtT~~G~iDd 225 (460)
T COG0076 154 PGGKPNIVCSETAHFSFEKAARYLGL---GLRRVPTVPT-DYRIDVDALEEAIDENTIGG----VVVGTAGTTDTGSIDD 225 (460)
T ss_pred cCCCCeEEecCcchhHHHHHHHHhCC---CceeEEeccC-ccccCHHHHHHHHHhhccCc----eEEEEecCCCCCccCC
Confidence 1345899999999999999999999 7777887764 57999999999999998765 6999999999999999
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhc-ccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY-IDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~-~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
|++|++||+++++|+|||||+||+.+++.+.+.. ..+++++|||++|+|||+++|++||++++||++.+.+......+|
T Consensus 226 i~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~~~~~y 305 (460)
T COG0076 226 IEELADIAEEYGIWLHVDAAFGGFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILIFADYY 305 (460)
T ss_pred HHHHHHHHHHcCCcEEEEccccceeecccCccchhhcCCCCceEEEECcccccCCCCCceEEEEECHHHhhhhhhccccc
Confidence 9999999999999999999999999977777766 678999999999999999999999999999998788777777888
Q ss_pred ccccccccCCccCCCCCccCCCCCC-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRF-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCF 409 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f 409 (486)
+... ....+++.++|.. .++++|+.++.+|.+||+++++++.+++++|++.|++.+.|+++++|.+++|||
T Consensus 306 l~~~--------~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~~~~~~e~~~~p~l~~V~f 377 (460)
T COG0076 306 LPGG--------GIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELEKLGDFELVNEPELPIVAF 377 (460)
T ss_pred CCCC--------CcCceeEeeccchHHHHHHHHHHHHhCHhHHHHHHHHHHHHHHHHHHHHHhCCCcEeecCCccceEEE
Confidence 7653 2234566777775 789999999999999999999999999999999999998899999999999999
Q ss_pred EecCCCC-Cc---ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHN-DE---DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 410 ~~~~~~~-~~---~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
++++... .. ...+..+..+......+|..++..+.+.++.++++.+.++.++.++ +.+...+....+++
T Consensus 378 r~~~~~~~~~~~~~~~~~~gw~v~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 450 (460)
T COG0076 378 RLKDDEDTLADLSERLDRRGWQVPAQLLPKGLAIVFGTHVTGRQGLKFIVANLLITDRE-ESLLALIEEPGREI 450 (460)
T ss_pred EcCCcccchhchHHHHHhcCceeecccCCccceeeeeeEEeeeeeehhhcchhhhhhhh-HHHHHHhhhhhhhh
Confidence 9954210 00 0001111122222333454555566666777888877777777666 55555555544443
No 9
>PLN02263 serine decarboxylase
Probab=100.00 E-value=6.1e-57 Score=445.89 Aligned_cols=359 Identities=21% Similarity=0.273 Sum_probs=305.5
Q ss_pred HHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCH-HHHHHHHHHHhcCcCccccccCh---hhHHHHHHHHHHHHHH
Q 041829 53 LQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSV-AGFLGEMLSAGLNIVGFSWITSP---AATELEMIVLDWLAKL 128 (486)
Q Consensus 53 ~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~~---~~~~le~~~~~~la~l 128 (486)
++++++ ++.+.+.++..+ |+|| |...++ ++.+++++...+|+.+..|..+| ...++|+++++|++++
T Consensus 75 ~~~~l~---~~~~~~~~~~~~-----~~gY-p~n~~~d~s~l~~~l~~~~nN~Gdp~~~s~~~~~s~~~E~~Vi~wla~L 145 (470)
T PLN02263 75 MASVLA---RYRKTLVERTKH-----HLGY-PYNLDFDYGALGQLQHFSINNLGDPFIESNYGVHSRQFEVGVLDWFARL 145 (470)
T ss_pred HHHHHH---HHHHHHHhcccc-----eeCC-CCcccCChhhHHHHHHhhccCCCCccccCCcchhHHHHHHHHHHHHHHH
Confidence 588999 888888887543 9999 777777 79999999999999999999998 7999999999999999
Q ss_pred cCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCC
Q 041829 129 LKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTD 208 (486)
Q Consensus 129 ~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~ 208 (486)
+|++++ ..+|++|+||||||++||++||+.. ++.++|+|+.+|+|+.|+++++|+ +++.||++
T Consensus 146 ~g~p~~-----~~~G~vtsGGTEaNL~Al~aARe~~---------~~~vvy~S~~aH~Sv~KAa~llgi---~~~~Vp~d 208 (470)
T PLN02263 146 WEIEKN-----EYWGYITNCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---ECVKVDTL 208 (470)
T ss_pred hCCCCC-----CCeEEEeCcHHHHHHHHHHHHHhhc---------CCcEEEEcCCccHHHHHHHHhcCC---cceEeccC
Confidence 999763 1258999999999999999999964 456899999999999999999999 99999998
Q ss_pred CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC-----EEEeeccccchhccCccch
Q 041829 209 SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM-----WFHVDAAYAGSACICPEYR 283 (486)
Q Consensus 209 ~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~-----~lhvD~A~g~~~~~~~~~~ 283 (486)
++ ++||+++|+++|.+++ .+|++|++|+|||++|++|||++|+++|+++|+ |+||||||||++++..+..
T Consensus 209 ~~--g~mD~~aL~~aI~~d~---~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~ 283 (470)
T PLN02263 209 VS--GEIDCADFKAKLLANK---DKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRA 283 (470)
T ss_pred CC--CcCcHHHHHHHHHhCC---CCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccc
Confidence 54 6999999999997764 369999999999999999999999999999997 9999999999877443334
Q ss_pred hcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC-CcHHHHH
Q 041829 284 QYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF-RSLKLWM 362 (486)
Q Consensus 284 ~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~ 362 (486)
+.+.+.+.+||+++|+|||+++|++||++++|++. ..++...++|+... +.++.+||++ .++++|+
T Consensus 284 ~~~df~~~vDSIsvD~HK~l~~P~~cgvll~R~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~al~lW~ 350 (470)
T PLN02263 284 PKVTFKKPIGSVSVSGHKFVGCPMPCGVQITRMEH--INVLSSNVEYLASR-----------DATIMGSRNGHAPIFLWY 350 (470)
T ss_pred cccCCCcCccEEEECCccccCCCcCEEEEEEehhh--HhhhccChHhhCCC-----------CCCcCCCCCcHHHHHHHH
Confidence 44556667999999999999999999999999743 35677888998653 2467899996 5899999
Q ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEe
Q 041829 363 VLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISH 442 (486)
Q Consensus 363 ~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~ 442 (486)
+|+.+|.+|++++++++.++|+++.++|++. +++++.+|..++|+|+.+. +. . ..+| +.++.
T Consensus 351 ~L~~~G~~G~~~~i~~~~~~A~~l~~~l~~~-g~~~~~~p~s~~V~f~~p~--------~~----~----~~~g-W~L~~ 412 (470)
T PLN02263 351 TLNRKGYRGFQKEVQKCLRNAHYLKDRLREA-GISAMLNELSSTVVFERPK--------DE----E----FVRR-WQLAC 412 (470)
T ss_pred HHHHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEeCCCceEEEEecCc--------hH----H----hhcc-eEEcc
Confidence 9999999999999999999999999999998 7887778889999998432 11 1 1234 44444
Q ss_pred eeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 443 TVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 443 ~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.. ..+|+++ ++..+++.+|++++.|++....
T Consensus 413 ~~----~~~Hivv-mphv~~~~id~fi~DL~~~~~~ 443 (470)
T PLN02263 413 QG----NIAHVVV-MPSVTIEKLDYFLKELVEKRST 443 (470)
T ss_pred CC----CcEEEEE-cCCCCHHHHHHHHHHHHHHHhh
Confidence 21 3699999 7888999999999999887664
No 10
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=100.00 E-value=2.8e-56 Score=445.62 Aligned_cols=400 Identities=17% Similarity=0.195 Sum_probs=330.7
Q ss_pred CCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHH
Q 041829 43 PDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVL 122 (486)
Q Consensus 43 ~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~ 122 (486)
...+|++|.+.+++++ ++...+.. .+..||+|++|+.+++.+. +.+++..++|.+...+..+|..+++|++++
T Consensus 14 ~~~~p~~~~~~~~~~~---~~~~~iyl--d~~a~~~~~~~~tt~~~p~--~~~~~~~~l~~~~~np~s~~~~~~le~~~~ 86 (431)
T TIGR01788 14 KYRMPEEEMPPDAAYQ---LIHDELSL--DGNPRLNLATFVTTWMEPE--ARKLMDETINKNMIDKDEYPQTAEIENRCV 86 (431)
T ss_pred cccCCCCCCCHHHHHH---HHHHHhhh--cCCcceeeeeeeCCCCCHH--HHHHHHHHHhcCCCCcccCccHHHHHHHHH
Confidence 3479999999999999 88776543 3456899999998766555 588888889877777888888889999999
Q ss_pred HHHHHHcCCC-C-CCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccC--CCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 123 DWLAKLLKLP-E-DFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNS--LEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 123 ~~la~l~g~~-~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~--~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
+|+++++|++ . + ...+++|+||||||++|+.++|.+...+....+ ..+.+|++|+.+|+|+.++++.+|+
T Consensus 87 ~~la~llg~~~~~~-----~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~ka~~~lg~- 160 (431)
T TIGR01788 87 NMLADLWHAPAKDA-----EAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWEKFARYFDV- 160 (431)
T ss_pred HHHHHHhCCCCCCC-----CCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHHHHHHHcCc-
Confidence 9999999998 2 1 125677999999999999998864332211111 2356899999999999999999999
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh------CCEEEeeccc
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN------GMWFHVDAAY 272 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~------g~~lhvD~A~ 272 (486)
+++.||++++ .++||+++|+++|+++ +++|++++++|.+|++||+++|+++|+++ |+|+||||||
T Consensus 161 --~v~~i~~d~~-~~~vd~~~L~~~i~~~------t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq 231 (431)
T TIGR01788 161 --ELREVPMDPG-RYVIDPEQVVEAVDEN------TIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAAS 231 (431)
T ss_pred --eeEEEecCCC-ceeeCHHHHHHHHhhC------CeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEeccc
Confidence 9999999873 3699999999999765 47999999999999999999999999999 9999999999
Q ss_pred cchhcc--CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 273 AGSACI--CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 273 g~~~~~--~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
+|+.+. +++.+..+. ++++||+++|+|||+++|+|||++++|++..+...+...++|+.... .+++++
T Consensus 232 ~g~~~p~~~~~~~~~~~-~~~~DSis~s~HK~~~~P~g~G~l~~r~~~~l~~~~~~~~~yl~~~~---------~~~t~~ 301 (431)
T TIGR01788 232 GGFIAPFVYPDLEWDFR-LPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDE---------PTFTLN 301 (431)
T ss_pred HHHHHHHhCCCchhhcC-CCCceEEEECchhccCCCCCcEEEEEeChHHcchhheecccccCCCC---------CCccee
Confidence 987753 444444443 67899999999999999999999999998656556667778885321 235788
Q ss_pred CCCCC-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCceEEEEEecCCCCCcccchHHHHHH
Q 041829 351 LGRRF-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-RIFSLVCFRLLPPHNDEDHGNKLNHKL 428 (486)
Q Consensus 351 ~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l 428 (486)
++|++ ++++.|+.++.+|.+|++++++++.+++++|.++|++.|+|+++.+ +.+++|||++.+... .+..+.++
T Consensus 302 ~sR~g~~al~~w~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~el~~~~~~~~iV~Fr~~~~~~----~~~~~~~l 377 (431)
T TIGR01788 302 FSRPANQVIAQYYNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPFEIISDGSGIPLVAFKLKDDAD----PGYTLYDL 377 (431)
T ss_pred cCchHHHHHHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeCCCCceEEEEEeCCCCC----CCcCHHHH
Confidence 99986 7789999999999999999999999999999999999999999987 799999999975321 12235778
Q ss_pred HHHHHccCcEE---EEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 429 LDDINSTGKIF---ISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 429 ~~~l~~~g~~~---~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.++|.++|.++ .+++.+++..++|+++ ++.++++.++++++.|.++..++
T Consensus 378 ~~~L~~~G~~~~~~~~p~~~~~~~~lR~~~-~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 378 SHRLRERGWIVPAYTLPKNAEDIVVMRIVV-REGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHCCCcccCCCCCCccCCeEEEEEEe-cCCCCHHHHHHHHHHHHHHHHhh
Confidence 88999999654 4555678889999999 88889999999999999987754
No 11
>PLN03032 serine decarboxylase; Provisional
Probab=100.00 E-value=7.4e-50 Score=391.16 Aligned_cols=356 Identities=21% Similarity=0.260 Sum_probs=282.2
Q ss_pred HHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccc---cccChhhHHHHHHHHHHHHHHcC
Q 041829 54 QNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFS---WITSPAATELEMIVLDWLAKLLK 130 (486)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~---~~~~~~~~~le~~~~~~la~l~g 130 (486)
.++++ .+.+.+.. .+..|+||..+..--++.+..++....|+.+.. +..+..+.++|+++++|+++++|
T Consensus 9 ~~~~~---~~~~~~~~-----~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~gnP~s~~~~g~~a~~~e~~v~~~ia~llg 80 (374)
T PLN03032 9 ADILA---SYDKLLAE-----KSSVHFGYPYNLDFDYGELSQLMKYSINNLGDPFIESNYGVHSRQFEVGVLDWFARLWE 80 (374)
T ss_pred HHHHH---HHHHHHHH-----hhhhccCCCchhccChHHHHHHHHhcccCCCCCcccCCCCccHHHHHHHHHHHHHHHhC
Confidence 45555 55554433 366799997665444456666665544443333 33455789999999999999999
Q ss_pred CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC
Q 041829 131 LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS 210 (486)
Q Consensus 131 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~ 210 (486)
++++. .+|+||+||||||++|+.++|+.. ++.+|++|..+|+|+.|+++.+|+ .++.||++++
T Consensus 81 ~~~~~-----~~G~fTsGGTEaNl~al~~ar~~~---------~~~~vi~s~~~H~Sv~kaa~~lg~---~~~~V~~d~~ 143 (374)
T PLN03032 81 LEKDE-----YWGYITTCGTEGNLHGILVGREVF---------PDGILYASRESHYSVFKAARMYRM---EAVKVPTLPS 143 (374)
T ss_pred CCCcc-----CCEEEeCchHHHHHHHHHHHHHhC---------CCcEEEeCCCceeHHHHHHHHcCC---CCeEeeeCCC
Confidence 97641 248999999999999999998752 345899999999999999999999 7899999865
Q ss_pred CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC-----CEEEeeccccchhccCccchhc
Q 041829 211 TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG-----MWFHVDAAYAGSACICPEYRQY 285 (486)
Q Consensus 211 ~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g-----~~lhvD~A~g~~~~~~~~~~~~ 285 (486)
++||+++|+++|++++ ..|++|++++|+|++|++||+++|+++|+++| +|+|||||+|++.+......+.
T Consensus 144 --g~id~~~L~~~i~~~~---~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~ 218 (374)
T PLN03032 144 --GEIDYDDLERALAKNR---DKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPE 218 (374)
T ss_pred --CcCcHHHHHHHHHHcC---CCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcc
Confidence 5999999999998653 25889999999999999999999999999996 5999999999987654322222
Q ss_pred ccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHH
Q 041829 286 IDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVL 364 (486)
Q Consensus 286 ~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l 364 (486)
+....++||+++|+|||+++|++||++++|++. .+.+...++|+... ++++++||+ +.++++|++|
T Consensus 219 ~~~~~~vDSis~s~HK~~g~P~g~G~ll~r~~~--~~~~~~~~~Yl~~~-----------d~ti~gSR~g~~~l~~w~~l 285 (374)
T PLN03032 219 VTFRKPIGSVSVSGHKFLGCPMPCGVALTRKKH--VKALSQNVEYLNSR-----------DATIMGSRNGHAPLYLWYTL 285 (374)
T ss_pred cCCCcCCcEEEECcccccCCCcCeEEEEEEchh--hHhhccCCcccCCC-----------CCcccCCCchHHHHHHHHHH
Confidence 333457999999999999999999999999743 34567788898642 358899997 6789999999
Q ss_pred HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee
Q 041829 365 RLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV 444 (486)
Q Consensus 365 ~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~ 444 (486)
+.+|.+|++++++++.++|++|.+.|++. +++++..|..++|+|+.+.. + . +. +| +.++...
T Consensus 286 ~~~G~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~p~~~~V~f~~~~~-------~----~----~~-~~-w~l~~~~ 347 (374)
T PLN03032 286 RRKGYRGIKRDVQHCMRNAHYLKDRLTEA-GLTCRLNELSSTVVFERPMD-------E----A----FI-KK-WQLACEG 347 (374)
T ss_pred HHhCHHHHHHHHHHHHHHHHHHHHHHHhC-CCcEEECCCceEEEEcCCCc-------H----h----Hh-he-eeecccC
Confidence 99999999999999999999999999997 88888888899999886521 1 1 11 23 4455321
Q ss_pred ECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 445 LSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 445 ~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
..+|+++ +++++++.+|++++.|++.
T Consensus 348 ----~~~hi~v-m~~~~~~~id~fi~dl~~~ 373 (374)
T PLN03032 348 ----DIAHVVV-MPNVTVEKLDEFVEELVEV 373 (374)
T ss_pred ----CEEEEEE-CCCCCHHHHHHHHHHHhcc
Confidence 3899999 7888999999999998753
No 12
>PRK02769 histidine decarboxylase; Provisional
Probab=100.00 E-value=4.2e-48 Score=381.97 Aligned_cols=344 Identities=19% Similarity=0.263 Sum_probs=278.9
Q ss_pred CCcccccCCCCCCH-HHHHHHHHHHhcCcCccccccC---hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 76 SPNYFAYYPSNSSV-AGFLGEMLSAGLNIVGFSWITS---PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 76 ~p~~~~~~~~~~~~-~~~~~~~l~~~~n~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
||+|+.++|..... .+.+.+++....|+.+..+... ..+.++|+++++|+++++|+++.. ..|+||+||||
T Consensus 21 ~~~~~~g~p~~~~~~~~~~~~~~~~~~~n~gnp~~~~~~g~~~~~~e~~~~~~~a~l~g~~~~~-----~~G~~TsGgTe 95 (380)
T PRK02769 21 NQYFNVGYPEAADFDYSALKRFFSFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNE-----SWGYITNGGTE 95 (380)
T ss_pred hhhcccCCCchhhcCHHHHHHHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHhCCCCCC-----CCEEEecChHH
Confidence 66666665655555 6888888887766544333322 257899999999999999997541 25899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCC
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIG 231 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g 231 (486)
+|+.|+.++|+.. ++.+|++|+.+|+|+.++++.+|+ +.+.||++++ ++||+++|+++|+++ +
T Consensus 96 an~~a~~~ar~~~---------~~~~ii~s~~~H~Sv~ka~~~lg~---~~~~V~~~~~--g~id~~~L~~~i~~~---~ 158 (380)
T PRK02769 96 GNLYGCYLARELF---------PDGTLYYSKDTHYSVSKIARLLRI---KSRVITSLPN--GEIDYDDLISKIKEN---K 158 (380)
T ss_pred HHHHHHHHHHHhC---------CCcEEEeCCCceehHHHHHHHcCC---CCceeccCCC--CcCcHHHHHHHHHhC---C
Confidence 9999999998753 567899999999999999999999 7888998764 699999999999875 5
Q ss_pred CccEEEEEecCCccccccCChHHHHHHHHHhC---CEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc
Q 041829 232 LIPFFLCATVGTTSSTAVDPLLALGNIAKSNG---MWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD 308 (486)
Q Consensus 232 ~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g---~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~ 308 (486)
.+|++|++++|+|.+|.+||+++|+++|+++| +|+|||||+|++.+...+....+...+++||+++|+|||+++|+|
T Consensus 159 ~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~vDsis~s~HK~~~~P~g 238 (380)
T PRK02769 159 NQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMP 238 (380)
T ss_pred CCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCCCCEEEECCcccCCCCCC
Confidence 56889999999999999999999999999998 699999999998775444333344444899999999999999999
Q ss_pred ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Q 041829 309 CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFE 387 (486)
Q Consensus 309 ~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 387 (486)
||++++|++. +. .+....+|+.. .++++++||+ +.++++|++|+.+|.+|++++++++.++++++.
T Consensus 239 ~G~l~~r~~~-~~-~~~~~~~yl~~-----------~d~t~~GSR~g~~~l~lw~aL~~lg~~G~~~~~~~~~~la~~l~ 305 (380)
T PRK02769 239 CGIVLAKKKY-VE-RISVDVDYIGS-----------RDQTISGSRNGHTALLLWAAIRSLGSKGLRQRVQHCLDMAQYAV 305 (380)
T ss_pred cEEEEEehhh-hh-hcccCccccCC-----------CCCCccCCCCcHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH
Confidence 9999999753 32 34445677643 2347789997 578999999999999999999999999999999
Q ss_pred HHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHH
Q 041829 388 GLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNA 467 (486)
Q Consensus 388 ~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~ 467 (486)
+.|++. +++++.+|.+++|+|+.+. ..+. +| +.++... .++|+++ +++++++.||.
T Consensus 306 ~~L~~~-g~~~~~~p~~~~v~f~~~~------------~~~~-----~~-w~l~~~~----~~~hi~~-~~~~~~~~~~~ 361 (380)
T PRK02769 306 DRLQAN-GIPAWRNPNSITVVFPCPS------------ERIW-----KK-WHLATSG----NQAHIIT-MPHHNKQQIDS 361 (380)
T ss_pred HHHHhC-CCEEEcCCCceEEEEcCCC------------HHHH-----hC-eeEcccC----CEEEEEE-CCCCCHHHHHH
Confidence 999886 9999999999999997542 1121 33 4455432 3899999 88899999999
Q ss_pred HHHHHHHHHHH
Q 041829 468 AWEVMQDKASA 478 (486)
Q Consensus 468 ~~~~l~~~~~~ 478 (486)
+++.|.+....
T Consensus 362 f~~dl~~~~~~ 372 (380)
T PRK02769 362 LIDELIFDLKN 372 (380)
T ss_pred HHHHHHHHHhc
Confidence 99999887653
No 13
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=100.00 E-value=3.1e-44 Score=355.81 Aligned_cols=341 Identities=38% Similarity=0.616 Sum_probs=288.3
Q ss_pred ccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHH
Q 041829 79 YFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLL 158 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~ 158 (486)
|++++++++.+++.++|+++..+|++...|..++...++|+++++|+++++|++.. ..++++|+|||+||++++.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~~y~~~~~~~~le~~~~~~~~~~~g~~~~-----~~~~~~t~ggt~a~~~al~ 75 (345)
T cd06450 1 FLAGFVTTMDPPALLLEMLTSAKNAIDFTWDESPAATEMEAEVVNWLAKLFGLPSE-----DADGVFTSGGSESNLLALL 75 (345)
T ss_pred CcccccCCCcHHHHHHHHHHHhcCCCCcccccCchhHHHHHHHHHHHHHHhCCCCC-----CCCEEEeCChhHHHHHHHH
Confidence 67888888999999999999999999888999999999999999999999999721 1269999999999999999
Q ss_pred HHHHHHHHHhCcc---CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccE
Q 041829 159 AARDKALKRVGKN---SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPF 235 (486)
Q Consensus 159 ~a~~~~~~~~~~~---~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~ 235 (486)
+++.+..++.... ..++.+|+++..+|+++.++++.+|. +++.+|++++ +.+|+++|++++++..+++.++.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~ 150 (345)
T cd06450 76 AARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAAAYLDV---KVRLVPVDED--GRMDPEALEAAIDEDKAEGLNPI 150 (345)
T ss_pred HHHHHhhhhhhcccccccCCeEEEEcCcchhHHHHHHHHHhc---CeEEeeeCCC--CCcCHHHHHHHHHHHHHCCCCcE
Confidence 9887543321111 11356899999999999999999999 9999999865 49999999999988777777788
Q ss_pred EEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEe
Q 041829 236 FLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVK 315 (486)
Q Consensus 236 ~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r 315 (486)
+|+++.++|++|.++|+++|+++|+++|+|+|+|+||+++....+.......++.++|++++++|||+++|+++|+++++
T Consensus 151 ~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g~g~~~~~ 230 (345)
T cd06450 151 MVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVDAAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLGCSAVLVR 230 (345)
T ss_pred EEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEechhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcchHHHHHH
Confidence 99999999999999999999999999999999999999877655444433334568999999999999999999987655
Q ss_pred CchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 041829 316 DRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR 395 (486)
Q Consensus 316 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~ 395 (486)
.+++|++++.+|.+++++++++..++++++.+.|+++++
T Consensus 231 -----------------------------------------~~~~~~~l~~l~~~g~~~~~~~~~~~~~~l~~~L~~~~~ 269 (345)
T cd06450 231 -----------------------------------------ALKLWATLRRFGRDGYGEHIDRIVDLAKYLAELIRADPG 269 (345)
T ss_pred -----------------------------------------HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 458899999999999999999999999999999999999
Q ss_pred eEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 396 FEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 396 ~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
++++.++..++++|++.+.. ..+..+.++.++|.++|++++++..+.+..++|++++++.+|++|+++++++|++
T Consensus 270 ~~~~~~~~~~iv~f~~~~~~----~~~~~~~~i~~~L~~~g~~~~~~~~~~~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 270 FELLGEPNLSLVCFRLKPSV----KLDELNYDLSDRLNERGGWHVPATTLGGPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred eEEecCCceeEEEEEECCcc----hhhHHHHHHHHHHHhcCCEEEEeeEECCeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 99988888999999986420 0123456788889888878777766666779999996566799999999999975
No 14
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=100.00 E-value=2.3e-35 Score=295.23 Aligned_cols=367 Identities=20% Similarity=0.273 Sum_probs=270.2
Q ss_pred CCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcC
Q 041829 51 ESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLK 130 (486)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g 130 (486)
.+..++++ .+.+...++... . ++++...+.+. +.++ +.+..++..+.......+...++++++.+++++++|
T Consensus 2 ~~~~~~~~---~~~~~~~~~~~~-~--~~~~~~~~~~~-~~~~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g 73 (371)
T PRK13520 2 LSEEEILE---ELEEYRSEDLKY-E--RILSSMCTEPH-PIAR-KAHEMFLETNLGDPGLFPGTAKLEEEAVEMLGELLH 73 (371)
T ss_pred CCHHHHHH---HHHHHHhcCCCH-H--HeeeeeecCch-HHHH-HHHHHHHhcCCCCcccCccHHHHHHHHHHHHHHHhC
Confidence 46789999 777776676543 2 57887655433 3332 444444433222222235678888999999999999
Q ss_pred CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC
Q 041829 131 LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS 210 (486)
Q Consensus 131 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~ 210 (486)
++.. .+++++|||++|..++.+++....+ +++.|+++..+|+++.++++..|+ +++.||++++
T Consensus 74 ~~~~-------~~~~~~ggt~a~~~a~~~~~~~~~~-------~~~~vl~~~~~h~s~~~~~~~~g~---~~~~v~~~~~ 136 (371)
T PRK13520 74 LPDA-------YGYITSGGTEANIQAVRAARNLAKA-------EKPNIVVPESAHFSFDKAADMLGV---ELRRAPLDDD 136 (371)
T ss_pred CCCC-------CeEEecCcHHHHHHHHHHHHhhccC-------CCceEEecCcchHHHHHHHHHcCc---eEEEecCCCC
Confidence 8764 4799999999999998877653110 356789999999999999999999 9999998754
Q ss_pred CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccc-hhcccCC
Q 041829 211 TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEY-RQYIDGV 289 (486)
Q Consensus 211 ~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~-~~~~~~~ 289 (486)
+.+|+++|+++|+++ +.+|+++.++|++|.++|+++|+++|+++|+++|||+||+++....... ...-...
T Consensus 137 --~~~d~~~l~~~i~~~------~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~ 208 (371)
T PRK13520 137 --YRVDVKAVEDLIDDN------TIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSL 208 (371)
T ss_pred --CcCCHHHHHHHHhhC------CEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccC
Confidence 589999999999764 3467788889999999999999999999999999999998765421111 0011113
Q ss_pred cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhC
Q 041829 290 EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYG 368 (486)
Q Consensus 290 ~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g 368 (486)
.++|++++++|||+.+|.++|+++++++..+. .+....+|+.... .+...+++. ....++|.+++.++
T Consensus 209 ~~vd~~~~s~~K~~~a~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~al~~l~ 277 (371)
T PRK13520 209 PGVDSITIDPHKMGLAPIPAGGILFRDESYLD-ALAVDTPYLTSKK----------QATLTGTRSGAGVAATYAVMKYLG 277 (371)
T ss_pred CCCceEEECCccccCccCCceEEEEcCHHHHH-hhcccCccccCCC----------CcceEeeccChHHHHHHHHHhhhc
Confidence 47899999999999999999999998875443 3443445543211 111223343 34568899999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCE
Q 041829 369 LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGK 448 (486)
Q Consensus 369 ~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~ 448 (486)
.++++++.++..+++++|.+.|+++ +++++.++..++++|.+.+ ..++.+.|.++| +.+... .+.
T Consensus 278 ~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-----------~~~v~~~L~~~g-i~v~~~--~~~ 342 (371)
T PRK13520 278 REGYRKVVERCMENTRWLAEELKER-GFEPVIEPVLNIVAFDDPN-----------PDEVREKLRERG-WRVSVT--RCP 342 (371)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHhC-CCEEecCCCceEEEEecCC-----------HHHHHHHHHHCC-ceeccC--CCC
Confidence 9999999999999999999999998 8985556777888887642 145677777777 444432 223
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 449 YILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 449 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.++|+++ ++++|++||+++++.|+++.+
T Consensus 343 ~~iRis~-~~~~t~edi~~~~~~l~~~~~ 370 (371)
T PRK13520 343 EALRIVC-MPHVTREHIENFLEDLKEVKK 370 (371)
T ss_pred CEEEEEE-ECCCCHHHHHHHHHHHHHHhh
Confidence 5899998 778999999999999987653
No 15
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=100.00 E-value=2.5e-35 Score=280.03 Aligned_cols=393 Identities=16% Similarity=0.183 Sum_probs=300.3
Q ss_pred CCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCc--ccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHH
Q 041829 44 DSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPN--YFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIV 121 (486)
Q Consensus 44 ~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~ 121 (486)
..+|++|.+-+++++ .+.+.++-+.. |.-.+ +..|.- .+.....+.+.+..+ |....+..|....+|.++
T Consensus 54 ~~lP~~gl~~d~v~~---~i~~~~~ld~~-~~~~~vS~~v~~~-~~~~~~l~~~~~~k~---N~l~~d~fp~~~~~e~~~ 125 (491)
T KOG1383|consen 54 FTLPSKGLPKDAVLE---LINDELMLDGN-PRLGLASGVVYWG-EPELDKLIMEAYNKF---NPLHPDEFPVVRKLEAEC 125 (491)
T ss_pred ecCCCCCCCHHHHHH---HHHHHhccCCC-cccCeeeEEEecC-CcchhhHHHHHHhhc---CccCccccchhHHHHHHH
Confidence 479999999999999 87777665543 32222 222222 333334444444333 666778899999999999
Q ss_pred HHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCC
Q 041829 122 LDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQN 201 (486)
Q Consensus 122 ~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~ 201 (486)
++.++.||+.+.+ ..|..|.|||+|.+++....+++.... .++..+.++++...|.++.|+++.+++ +
T Consensus 126 Vnm~~~L~~~~~~------~~g~~t~G~Ses~l~~~k~~~~~r~~~---k~I~~p~iv~~~~v~~a~eK~a~yf~v---~ 193 (491)
T KOG1383|consen 126 VNMIANLFNAPSD------SCGCGTVGGSESGLAAKKSYRNRRKAQ---KGIDKPNIVTPQNVHAAFEKAARYFEV---E 193 (491)
T ss_pred HHHHHHHhcCCcc------ccCccccccchHHHHHHHHHHHHHHhc---cCCCCccccchHHHHHHHHHHHhhEEE---E
Confidence 9999999998854 468999999999888877766654332 566788899999999999999999999 9
Q ss_pred eEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH-hCCEEEeeccccchhccCc
Q 041829 202 FRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS-NGMWFHVDAAYAGSACICP 280 (486)
Q Consensus 202 v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~-~g~~lhvD~A~g~~~~~~~ 280 (486)
++.||++++ +|++|+..+.+.+++++ ++|++.+|++++|.+||+++|+++.-+ +++.+|||+|-||+.....
T Consensus 194 l~~V~~~~~-~~~~D~~k~~~~i~eNt------i~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~ 266 (491)
T KOG1383|consen 194 LREVPLDEG-DYRVDPGKVVRMIDENT------IMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAG 266 (491)
T ss_pred EEeeecccc-ceEecHHHHHHHhccce------EEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCcccccccc
Confidence 999999985 69999999999999875 689999999999999999999999998 9999999999999876411
Q ss_pred cchh--cccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC-Cc
Q 041829 281 EYRQ--YIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF-RS 357 (486)
Q Consensus 281 ~~~~--~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~~ 357 (486)
.+.. .--+..++-|++.|+||++++|.|.|+++.|+++.+..-+...+.|+..- +..+++.+||.. ..
T Consensus 267 ~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~~~~q~~~~~~w~Gg~---------y~s~TlngSR~g~~v 337 (491)
T KOG1383|consen 267 YLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDWLGGI---------YASPTLNGSRPGSQV 337 (491)
T ss_pred ccCccccccCCCCceeEeeccceeeeeecCcEEEEEcccccccceEEEeccccCcc---------ccCcccccCCcccHH
Confidence 1111 11124478999999999999999999999999987665555566666442 345688899884 45
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCc
Q 041829 358 LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK 437 (486)
Q Consensus 358 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 437 (486)
.+.|++|-.+|.+||.+..+++.+.++.|++.|++++++.++.+|...++.|.-.. .+ -.++.+.|.+.|.
T Consensus 338 a~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~-------~~--i~elsd~l~~~GW 408 (491)
T KOG1383|consen 338 AAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSND-------VN--IFELSDLLRKKGW 408 (491)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhhhccccceecCCCcEEEEEccCCc-------cc--hhhhhHHHHhcCc
Confidence 68899999999999999999999999999999999999999999876666554321 11 1456677777784
Q ss_pred EEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhhh
Q 041829 438 IFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARLS 484 (486)
Q Consensus 438 ~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~~ 484 (486)
. +....... .+.+|++--.+.++-.++++..|+++.+++.+..+
T Consensus 409 ~-lnalq~P~--a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~~p~ 452 (491)
T KOG1383|consen 409 I-LNALQFPA--AIHICVTRVHAREDVADRFVADIRKVVEELKSLPE 452 (491)
T ss_pred C-ccccCCCC--ceEEEEEeeeccHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 33222221 34455533333455579999999999999886543
No 16
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=100.00 E-value=1.4e-34 Score=289.81 Aligned_cols=367 Identities=19% Similarity=0.271 Sum_probs=266.4
Q ss_pred CHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCC
Q 041829 52 SLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKL 131 (486)
Q Consensus 52 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~ 131 (486)
+.+++++ .+.+ ++.+..+.++++++..+.+.+.++. .+.+..++..+.......+....+++++.+++++++|+
T Consensus 1 ~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~g~ 74 (373)
T TIGR03812 1 SEEEVLE---ELKE-YRSEDLKYSDGRILGSMCTNPHPIA--VKAYDMFIETNLGDPGLFPGTKKIEEEVVGSLGNLLHL 74 (373)
T ss_pred CHHHHHH---HHHH-HHhcCCCCCCCcEEEEEeCCchHHH--HHHHHHHhhcCCCCcccCccHHHHHHHHHHHHHHHhCC
Confidence 3578888 8887 5566677788888887755544442 22233333222111122356678899999999999999
Q ss_pred CCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCC
Q 041829 132 PEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSST 211 (486)
Q Consensus 132 ~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~ 211 (486)
++. .+++++|||++++.++.+++..... +.+++.|+++..+|+++.++++..|+ +++.+|+++
T Consensus 75 ~~~-------~~~~~~g~~~~~~~~~~~~~~~~~~-----~~~g~~vl~~~~~h~~~~~~~~~~G~---~~~~v~~~~-- 137 (373)
T TIGR03812 75 PDA-------YGYIVSGGTEANIQAVRAAKNLARE-----EKRTPNIIVPESAHFSFEKAAEMLGL---ELRYAPLDE-- 137 (373)
T ss_pred CCC-------CeEEeccHHHHHHHHHHHHHHHHhc-----cCCCcEEEECCcchHHHHHHHHHcCC---eEEEEeeCC--
Confidence 764 4788999999998888766542111 01456888999999999999999999 999999875
Q ss_pred CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccc----hhccc
Q 041829 212 NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEY----RQYID 287 (486)
Q Consensus 212 ~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~----~~~~~ 287 (486)
++.+|+++|++++++.+ ..++.+.++|++|.++|+++|+++|+++|+|+|||+||+++....... .....
T Consensus 138 ~~~~d~~~l~~~l~~~~------~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~ 211 (373)
T TIGR03812 138 DYTVDVKDVEDLIDDNT------IGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDF 211 (373)
T ss_pred CCCcCHHHHHHHHhhCc------EEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccc
Confidence 36899999999997643 345555689999999999999999999999999999998765321110 01101
Q ss_pred CCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHH
Q 041829 288 GVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRL 366 (486)
Q Consensus 288 ~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~ 366 (486)
...++|++++++|||+.+|.++|.+++++++.+. .+....+|+.... .+...+++. ....+++.+++.
T Consensus 212 ~~~~~d~~~~s~~K~~~~~~~~G~~~~~~~~~~~-~l~~~~~~~~~~~----------~~~~~gt~~~~~~~~~~~~l~~ 280 (373)
T TIGR03812 212 SLPGVQSITIDPHKMGLSPIPAGGILFRSKSYLK-YLSVDAPYLTVKK----------QATITGTRSGASAAATYAVIKY 280 (373)
T ss_pred cCCCCCEEEECccccCCCcCCceEEEEeCHHHHh-hhcccCcccCCCC----------CcceEeechhHHHHHHHHHHHH
Confidence 1236899999999999999999988887766443 3333445543211 112234444 345688899999
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC
Q 041829 367 YGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS 446 (486)
Q Consensus 367 ~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 446 (486)
++.++++++.++..+++++|++.|+++ +++.+.++..++++|++.. . ..+.++|.++| +++... .
T Consensus 281 l~~~g~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~v~~~~~~-------~----~~v~~~L~~~g-i~v~~~--~ 345 (373)
T TIGR03812 281 LGREGYRKIVAECMENTRYLVEELKKI-GFEPVIEPVLNIVAFEVDD-------P----EEVRKKLRDRG-WYVSVT--R 345 (373)
T ss_pred hCHHHHHHHHHHHHHHHHHHHHHHHhC-CCeEEcCCCceEEEEEeCC-------H----HHHHHHHHHCC-ceeccC--C
Confidence 999999999999999999999999998 6665556778888888642 1 35777777777 445443 2
Q ss_pred CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 447 GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 447 ~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
+..++|+++ ++.+|++|+++++++|++
T Consensus 346 ~~~~iRis~-~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 346 CPKALRIVV-MPHVTREHIEEFLEDLKE 372 (373)
T ss_pred CCCEEEEEE-ECCCCHHHHHHHHHHHhh
Confidence 345899999 678999999999999975
No 17
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=100.00 E-value=1.7e-34 Score=275.15 Aligned_cols=343 Identities=18% Similarity=0.181 Sum_probs=257.1
Q ss_pred CcccccCCCCCCHHHHHHHHH---HHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHH
Q 041829 77 PNYFAYYPSNSSVAGFLGEML---SAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAV 153 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l---~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~ 153 (486)
+-|+.|..+.+..+.++..++ +..+.++...+..|..+..+-+++++.+++++|.++. +.+||+||||+|
T Consensus 2 miYlD~~ATTp~~~~v~~~m~~~~~~~fgNPsS~H~~G~~A~~~ve~AR~~iA~llga~~~-------eIiFTSG~TEsn 74 (386)
T COG1104 2 MIYLDNAATTPVDPEVLEAMLPYLTEVFGNPSSLHSFGREARKAVEEAREQIAKLLGADPE-------EIIFTSGATESN 74 (386)
T ss_pred cccccccccCCCCHHHHHHHHHHHHhhcCCccchhHhHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEecCCcHHH
Confidence 457777777666666655544 4444454556677888888888899999999999885 699999999999
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh---CCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC
Q 041829 154 LVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG---GIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI 230 (486)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~---g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~ 230 (486)
.+|+..+......+ ..+..|++|..+|+++.+.++.+ |+ +|.++|++.+ |.+|+++|+++|++++
T Consensus 75 NlaI~g~~~a~~~~-----~~~~HIIts~iEH~aVl~~~~~Le~~g~---~Vtyl~V~~~--G~v~~e~L~~al~~~T-- 142 (386)
T COG1104 75 NLAIKGAALAYRNA-----QKGKHIITSAIEHPAVLNTCRYLERQGF---EVTYLPVDSN--GLVDLEQLEEALRPDT-- 142 (386)
T ss_pred HHHHHhhHHhhhcc-----cCCCeEEEcccccHHHHHHHHHHHhcCC---eEEEeCCCCC--CeEcHHHHHHhcCCCc--
Confidence 99998643322110 14568999999999999999999 88 9999999975 5999999999999875
Q ss_pred CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcce
Q 041829 231 GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCS 310 (486)
Q Consensus 231 g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g 310 (486)
.+|.+.+.+|.+|.++||++|+++|+++|++||||++++.+-+..+-.. . ++|.+++++||+. +|.|+|
T Consensus 143 ----~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~-~-----~vD~ls~SaHK~~-GpkGiG 211 (386)
T COG1104 143 ----ILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEE-L-----GVDLLSFSAHKFG-GPKGIG 211 (386)
T ss_pred ----eEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccc-c-----CcceEEeehhhcc-CCCceE
Confidence 5899999999999999999999999999999999999988776654221 1 5999999999965 599999
Q ss_pred EEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCc------HHHHHHHHHhChhhHHHHHHHHHHHHH
Q 041829 311 ALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRS------LKLWMVLRLYGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 311 ~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~------l~~~~~l~~~g~~g~~~~~~~~~~~a~ 384 (486)
++++|+.-.+ .+.+... +.+.++|... .++-.+++ ...+.+.....+...+++
T Consensus 212 aLyv~~~~~~-------~p~i~GG-------------gQE~g~RsGTenv~~Ivg~~~A~~-~a~~~~~~~~~~~~~lr~ 270 (386)
T COG1104 212 ALYVRPGVRL-------EPLIHGG-------------GQERGLRSGTENVPGIVGFGKAAE-IAVEELEEENARLRKLRD 270 (386)
T ss_pred EEEECCCCcc-------CceeccC-------------cCCCCCCCCCccHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 9999764322 1233222 2244455332 23333333 235667778888999999
Q ss_pred HHHHHHhcC-CCeEEecCC---CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---------------
Q 041829 385 HFEGLVAQD-LRFEVVTPR---IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL--------------- 445 (486)
Q Consensus 385 ~l~~~l~~~-~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------------- 445 (486)
+|.+.|.+. |++.+...+ ..++++|.+.... .+.+.-.|...| ++++.+.-
T Consensus 271 ~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~gv~---------gE~ll~~L~~~g-I~vStGSACsS~~~~pShVL~Am 340 (386)
T COG1104 271 RLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPGVE---------GESLLLALDLAG-IAVSTGSACSSGSLEPSHVLRAM 340 (386)
T ss_pred HHHHHHHhcCCcEEEcCCcccCCCCeEEEEeCCCc---------HHHHHHhccccC-eEEeccccccCCCCCccHHHHHc
Confidence 999999975 888887543 2457777776432 134555566666 44443310
Q ss_pred -----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 446 -----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 446 -----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.-+..+|+++ +..||++|||++++.++++.+++.+
T Consensus 341 G~~~e~a~~siR~S~-g~~tt~eei~~~~~~l~~~i~~lr~ 380 (386)
T COG1104 341 GISEELAHGSIRFSL-GRFTTEEEIDAAAEALKEIIKRLRE 380 (386)
T ss_pred CCChHHhCccEEEEc-CCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 0137999999 9999999999999999999988764
No 18
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.9e-34 Score=285.94 Aligned_cols=352 Identities=17% Similarity=0.174 Sum_probs=263.5
Q ss_pred cccccCCCCCCHHHHHHHHHHHhc---CcCc--cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGL---NIVG--FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEA 152 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~---n~~~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a 152 (486)
.|+.+..++. .|..+.+.+..++ +.+. ..+..+..+++.++++++.+++++|.++. .+.+||.|+|++
T Consensus 24 vylD~aa~~~-~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~------~eIvft~~tT~a 96 (405)
T COG0520 24 VYLDNAATSQ-KPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSS------DEIVFTRGTTEA 96 (405)
T ss_pred EEecCccccc-CCHHHHHHHHHHHHhhcCCcCcccchHHHHHHHHHHHHHHHHHHHhCCCCC------CeEEEeCChhHH
Confidence 4666544443 5666666666543 2222 35556677888999999999999999852 269999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh----HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH
Q 041829 153 VLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA----LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL 228 (486)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~ 228 (486)
+.....+.... .+ +++.|+++...|+| +...++..|+ +++.+|++++ +.+|.+++++.+++.+
T Consensus 97 ln~va~~l~~~-~~-------~gdeIv~s~~EH~sn~~pw~~~~~~~Ga---~v~~i~~~~~--g~~~~~~~~~~i~~~T 163 (405)
T COG0520 97 LNLVARGLGRS-LK-------PGDEIVVSDLEHHSNIVPWQELAKRTGA---KVRVIPLDDD--GLLDLDALEKLITPKT 163 (405)
T ss_pred HHHHHHHhhhh-hc-------CCCEEEEccCcchhhHHHHHHHHHhcCc---EEEEEecCCC--CCcCHHHHHHhcCCCc
Confidence 76655543211 11 67899999999987 4456666788 9999999844 5999999999887765
Q ss_pred hCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc
Q 041829 229 TIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD 308 (486)
Q Consensus 229 ~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~ 308 (486)
.+|++++.+|.+|.+.|+++|+++||++|+|+.||+|++.+....+- ..+ ++|.+.+++|||+++|.|
T Consensus 164 ------klvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv-~~l-----~~Df~afsgHKwl~gP~G 231 (405)
T COG0520 164 ------KLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDV-QEL-----GCDFLAFSGHKWLLGPTG 231 (405)
T ss_pred ------eEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCc-hhc-----CCCEEEEcccccccCCCc
Confidence 48999999999999999999999999999999999999988776542 211 799999999999999999
Q ss_pred ceEEEEeCchHHHHHhcCCccccccccc-c-----cCCccCCCCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHH
Q 041829 309 CSALWVKDRNTLIQSLSTNPEFLKNKAS-Q-----ANMVVDYKDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHI 380 (486)
Q Consensus 309 ~g~l~~r~~~~~~~~~~~~~~yl~~~~~-~-----~~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~ 380 (486)
+|++++|+.. +.+. .|+...... . ....+....+.++.|.. ...+.+-++++.+...|++++.++.+
T Consensus 232 iGvLy~r~~~-l~~l----~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~ 306 (405)
T COG0520 232 IGVLYVRKEL-LEEL----EPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHER 306 (405)
T ss_pred eEEEEEchHH-Hhhc----CCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHHHHH
Confidence 9999999853 2221 232222111 0 11112223344455544 33467778888888889999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC---CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECC---------E
Q 041829 381 QLAKHFEGLVAQDLRFEVVTPR---IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSG---------K 448 (486)
Q Consensus 381 ~~a~~l~~~l~~~~~~~~~~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~---------~ 448 (486)
++++++.+.|+++|+++++.++ ..++++|.+.... ..++...|.++| +++....... .
T Consensus 307 ~L~~~~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~~---------~~dv~~~L~~~g-I~vr~g~~ca~p~~~~~~~~ 376 (405)
T COG0520 307 ELTEYLLEGLSELPGVEIYGPPDADRGGIVSFNVKGIH---------PHDVATLLDEKG-IAVRAGHHCAQPLHRLLGVD 376 (405)
T ss_pred HHHHHHHHHHhcCCCeEEecCCcccCceEEEEEeCCCC---------HHHHHHHHHhCC-eEEEeccccccHHHHhcCCC
Confidence 9999999999999999999865 5889999987532 356778888888 5544332211 2
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 449 YILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 449 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
..+|+|+ +.++|++|||+++++|+++.+
T Consensus 377 ~~iR~S~-~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 377 ATIRASL-HLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CceEEEE-eecCCHHHHHHHHHHHHHHhh
Confidence 3499999 999999999999999998754
No 19
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=100.00 E-value=3.6e-32 Score=287.59 Aligned_cols=385 Identities=14% Similarity=0.089 Sum_probs=272.0
Q ss_pred CCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCcc--ccc---cChhhHHHHHHHHHHH
Q 041829 51 ESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGF--SWI---TSPAATELEMIVLDWL 125 (486)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~--~~~---~~~~~~~le~~~~~~l 125 (486)
.++.++++ .+.++..+|..-. + .|++--.. ........+++...++.... .|. .+.+..+++.+...|+
T Consensus 466 ~sE~e~~r---~~~~L~~kn~~~~-~-~fi~lGsc-tmk~na~v~~l~~s~~ef~t~hPyqPe~~sqG~lq~i~elq~~l 539 (939)
T TIGR00461 466 HSETEMLR---YLHRLESKDLALN-N-SMIPLGSC-TMKLNATAEMMPITWPEFSNIHPFQPSNQVEGYQELIAQLEKWL 539 (939)
T ss_pred CCHHHHHH---HHHHHHhcCCCcc-c-cCCCCccC-CCccCHHHHHHHhcchhhcCcCCCCchHHhHHHHHHHHHHHHHH
Confidence 38999999 8877766665422 2 34442222 23344455555444443322 222 4556889999999999
Q ss_pred HHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEE
Q 041829 126 AKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVL 205 (486)
Q Consensus 126 a~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v 205 (486)
++++|++.. ++..++|+.+++++++++|.... ..+. .++.+|++|..+|.+..++++..|+ +++.|
T Consensus 540 ~eltGmd~~--------Sl~p~aGA~gE~agL~aiR~y~~-~rge--~~R~~vlip~saHgtnPasa~~~G~---~Vv~V 605 (939)
T TIGR00461 540 CSITGFDAI--------SLQPNSGAQGEYAGLRVIRSYHE-SRGE--NHRNICLIPVSAHGTNPASAAMAGM---QVVPV 605 (939)
T ss_pred HHHHCCCCc--------ccCCchHHHHHHHHHHHHHHHHH-hcCC--CCCCEEEEEccccCcCHHHHHHCCC---EEEEe
Confidence 999999963 78888899999999988886431 1111 1567899999999999999999999 99999
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-hHHHHHHHHHhCCEEEeeccccchhccCccchh
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQ 284 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~ 284 (486)
|++++ +.+|+++|++++++ .+.++.+|++++++| +|.++| +++|+++||++|.|++||+|+..........
T Consensus 606 ~~d~~--G~iDle~L~~~i~~---~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~P-- 677 (939)
T TIGR00461 606 NCDQD--GNIDLVDLKNKAEQ---HGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSP-- 677 (939)
T ss_pred ccCCC--CCcCHHHHHHHHhh---cCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCc--
Confidence 99854 59999999999975 233478999999998 799977 9999999999999999999996533332221
Q ss_pred cccCCcCCCceeeecccccCCCCcc-----eEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCc--
Q 041829 285 YIDGVEEADSFNMNAHKWFLTNFDC-----SALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRS-- 357 (486)
Q Consensus 285 ~~~~~~~aDs~~~~~hK~l~~p~~~-----g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~-- 357 (486)
+.-++|+++++.||+++.|.|+ |++.+|+. +...+. +.......+..+ ...+.....++.+++
T Consensus 678 ---g~~GaDi~~~s~HKtf~~P~G~GGPg~G~i~vr~~--L~~~lP---g~~v~~t~d~~g--req~Iga~s~~~~g~a~ 747 (939)
T TIGR00461 678 ---GDLGADVCHLNLHKTFCIPHGGGGPGMGPIGVKSH--LIPFLP---KHDVVSMITGIG--GSKSIGSVSAAPYGSAS 747 (939)
T ss_pred ---cccCCCEEEecCCccCCCCCCCCCCCeEEEEEhhh--chhhcC---CCcccccccCCC--CccccccccccccCcHH
Confidence 2238999999999999966654 99999963 222221 111111000000 001111222333444
Q ss_pred --HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCceEEEEEecCCCCCcccchHHHHHHHHH
Q 041829 358 --LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP----RIFSLVCFRLLPPHNDEDHGNKLNHKLLDD 431 (486)
Q Consensus 358 --l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 431 (486)
+++|+.++.+|.+|+++..+....+|+|+.++|++ +++++.+ +.++.++|++.+.. ++.+..+.++.++
T Consensus 748 ~~l~a~~yi~~lG~~GL~~~a~~ailnAnYl~~rL~~--~~~~l~~~~~~~~~hEfv~~~~~~~---~~~g~~~~dIakr 822 (939)
T TIGR00461 748 ILPISWMYIKMMGNEGLPKASVVAILNANYMATRLKD--HYPILFVGTLKHVAHECILDLRPLK---AKTGIEAIDVAKR 822 (939)
T ss_pred HHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHhhc--cCcccccCCCCceeEEEEEeccchh---hhcCCCHHHHHHH
Confidence 89999999999999999999999999999999987 5676654 35677888887521 1133456789999
Q ss_pred HHccCcEEEEee-eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 432 INSTGKIFISHT-VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 432 l~~~g~~~~~~~-~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
|.+.|....+.+ ...+ .+=+.+ +..++++|||++++++.++.+++.+
T Consensus 823 L~d~G~hapt~~~pv~g--~lmiep-TE~eskeelD~f~~al~~I~~e~~~ 870 (939)
T TIGR00461 823 LQDYGFHAPTLSFPVPG--TLMVEP-TESESLEELDRFCDAMIAIKEEINA 870 (939)
T ss_pred HHhCCeeccccCCccCC--eEEEEe-eccCCHHHHHHHHHHHHHHHHHHHH
Confidence 999995543322 2334 344444 5688999999999999999988775
No 20
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=100.00 E-value=4.5e-32 Score=277.67 Aligned_cols=398 Identities=15% Similarity=0.105 Sum_probs=265.2
Q ss_pred hhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHh-cCcCcccc---cc
Q 041829 35 PGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAG-LNIVGFSW---IT 110 (486)
Q Consensus 35 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~---~~ 110 (486)
|+.++..-+..+|+ .++.++++ ++.+....|.... ..|.|.-.+...++..+.+.+... ...+.+.| ..
T Consensus 35 p~~~~~~~~~~~~~--~se~~~~~---~~~~l~~~n~~~~--~~~~g~G~~~~~~~p~i~~~~~~~~~~~~~tpYq~e~~ 107 (481)
T PRK04366 35 PEELLRKEPPELPE--VSELEVVR---HYTRLSQKNYGVD--TGFYPLGSCTMKYNPKINEKVARLPGFAELHPLQPEET 107 (481)
T ss_pred CHHHhcCCCCCCCC--CCHHHHHH---HHHHHHhcCCCCC--cceecCcccCCCCCHHHHHHHHhCcchhcCCCCCChhh
Confidence 44555444556777 89999999 8888777775422 267776533333344444444332 11244556 35
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCC-CCeEEEecCCCchhHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSL-EKLVVYASDQTHSALQ 189 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~~~H~s~~ 189 (486)
+.+..++..++.+|+++++|++.. .+..++|+.+.+.++..++..... .|. ++..|+++...|+++.
T Consensus 108 sqG~lel~~~~~~~la~l~G~~~~--------~l~~~~GA~a~~~~l~~~r~~~~~----~Gd~~~~~Vlv~~~~hp~~~ 175 (481)
T PRK04366 108 VQGALELMYELQEWLKEITGMDAV--------TLQPAAGAHGELTGLLMIRAYHEA----RGDTKRTEVIVPDSAHGTNP 175 (481)
T ss_pred hhHHHHHHHHHHHHHHHHhCCCce--------EEEeCcHHHHHHHHHHHHHHHhhc----cCcCCCCEEEEcCCccHhHH
Confidence 677889999999999999999753 556567777776665544432111 111 3457889999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-CChHHHHHHHHHhCCEEEe
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV-DPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i-d~l~~I~~ia~~~g~~lhv 268 (486)
.+++..|+ +++.+|++. +|.+|+++|++++++++ .+|+++.++ ++|.+ +|+++|+++|+++|+|+||
T Consensus 176 ~~~~~~G~---~vv~v~~~~--~~~~D~e~L~~~i~~~t------~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iV 243 (481)
T PRK04366 176 ASAAMAGF---KVVEIPSNE--DGLVDLEALKAAVGEDT------AALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYY 243 (481)
T ss_pred HHHHHcCC---EEEEeecCC--CCCcCHHHHHhhcccCC------eEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEE
Confidence 99999999 999999974 36999999999997654 467778876 89998 6999999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCcc-----eEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDC-----SALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~-----g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
|+|+....+..-.. +-.++|++++++|||+++|.++ |+++++++ +.+.+ ++.+...... .-...
T Consensus 244 D~a~~~~~~g~~~~-----~~~GaD~~~~~~hK~l~~P~g~Ggp~~G~l~~~~~--~~~~l---p~~~v~~~g~-~~~l~ 312 (481)
T PRK04366 244 DGANLNAILGKARP-----GDMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKEE--LAPFL---PVPVVEKDGD-RYRLD 312 (481)
T ss_pred EecChhhhcccCCc-----cccCCCEEEEechhhcCCCCCCCCCCeeeeeehhh--hHhhC---CCCeeeccCC-ceeec
Confidence 99986542211111 1227999999999999988665 57888764 22222 2221111000 00011
Q ss_pred C-CCCccCCCCCC-----CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEecCCCC
Q 041829 344 Y-KDWQIPLGRRF-----RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPHN 416 (486)
Q Consensus 344 ~-~~~~~~~sr~~-----~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~~ 416 (486)
+ ....+.-.+.+ .++++|..+..+|.+|++++.+++..++++|+++|+++ +++.. .+..+.+.|....-..
T Consensus 313 ~~r~~~i~r~~a~t~~~l~~~~a~~~l~~~G~~Gl~~~a~~~~~~a~~l~~~L~~~--~~~~~~~~~~~~~~~~~~~~~~ 390 (481)
T PRK04366 313 YDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLKARLKDI--YDLPYDRPCMHEFVLSGKKLKE 390 (481)
T ss_pred ccccccCCCcccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhh--CcccCCCCeeEEEEEECccccc
Confidence 1 11111111222 23688999999999999999999999999999999987 44432 2333444444321000
Q ss_pred CcccchHHHHHHHHHHHccCcEEEEeeeE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 417 DEDHGNKLNHKLLDDINSTGKIFISHTVL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 417 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
.+....++.++|.+.|... ....+ .....+|+++ +..+|++|||+++++|+++.+++.++
T Consensus 391 ----~g~~~~~v~~~L~~~Gi~~-~~~~~p~~~~~~l~is~-~e~~t~edid~l~~~l~~i~~~~~~~ 452 (481)
T PRK04366 391 ----TGVRTLDIAKRLLDYGFHP-PTIYFPLIVPEALMIEP-TETESKETLDAFIAAMKQIAEEAKEN 452 (481)
T ss_pred ----cCCCHHHHHHHHHHCCccC-CccccccccCCeEEEcc-cCCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 0112366888888888432 21111 1135799999 89999999999999999998887654
No 21
>PRK05367 glycine dehydrogenase; Provisional
Probab=100.00 E-value=4.5e-31 Score=284.55 Aligned_cols=383 Identities=14% Similarity=0.095 Sum_probs=265.2
Q ss_pred CCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCc--ccc---ccChhhHHHHHHHHHHH
Q 041829 51 ESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVG--FSW---ITSPAATELEMIVLDWL 125 (486)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~---~~~~~~~~le~~~~~~l 125 (486)
.++.++++ .++++..+|....++..++|.... .....+. +....++... +.| +.+.+..+++.+..+|+
T Consensus 478 ~sE~e~~r---~~~~l~~kn~~~~~~~i~lGsct~--~~~p~~~-~~~~~~~~f~~~hP~qp~e~~qG~l~~i~e~q~~l 551 (954)
T PRK05367 478 HSETEMMR---YLRRLEDKDLALDRSMIPLGSCTM--KLNAAAE-MIPITWPEFANLHPFAPAEQAAGYRELIDQLEAWL 551 (954)
T ss_pred CCHHHHHH---HHHHHHhcCcCcccceeeCCcCCC--cCCHHHH-HHHHhCccccccCCCChHHHHHHHHHHHHHHHHHH
Confidence 58999999 888877788765556677887322 2222222 2222233221 222 34556889999999999
Q ss_pred HHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEE
Q 041829 126 AKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVL 205 (486)
Q Consensus 126 a~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v 205 (486)
++++|++.. .+..++|+++++.+|+++|..... .+. .++.+|++++.+|.|+.+++..+|+ +++.|
T Consensus 552 ~eltG~d~~--------sl~~~~ga~ge~agL~a~r~~~~~-~G~--~~r~~vlis~~aH~snp~sa~~~G~---~vv~v 617 (954)
T PRK05367 552 AEITGYDAV--------SLQPNAGAQGEYAGLLAIRAYHES-RGE--GHRDVCLIPSSAHGTNPASAVMAGM---KVVVV 617 (954)
T ss_pred HHHHCCCCE--------EECccHHHHHHHHHHHHHHHHhhc-cCC--CCCCEEEEEchhhhhhHHHHHHCCC---EEEEE
Confidence 999999852 455567889998888777753221 111 1356799999999999999999999 99999
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhc
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY 285 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~ 285 (486)
|++.+ +.+|+++|++++++. +.++++|+++++++..+..+|+++|+++||++|+|+|||+|+.+..+.....
T Consensus 618 ~~d~~--G~iD~~~L~~~i~~~---~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~p--- 689 (954)
T PRK05367 618 ACDEN--GNIDLDDLRAKAEEH---ADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARP--- 689 (954)
T ss_pred CCCCC--CCcCHHHHHHHHhcc---CCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCCh---
Confidence 99864 599999999999753 1247789999999874445899999999999999999999997554332221
Q ss_pred ccCCcCCCceeeecccccCCCCcce-----EEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC----C
Q 041829 286 IDGVEEADSFNMNAHKWFLTNFDCS-----ALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF----R 356 (486)
Q Consensus 286 ~~~~~~aDs~~~~~hK~l~~p~~~g-----~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~----~ 356 (486)
+.-++|++++++|||+++|.|+| ++++++. +. +|+......... +....+...+.++ .
T Consensus 690 --g~~GADi~~~s~HK~f~~P~G~GGPg~G~l~vr~~--l~-------p~lpg~~v~~~~--~~~~~g~v~ta~~g~al~ 756 (954)
T PRK05367 690 --GDIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAH--LA-------PFLPGHPVQIAG--GETGIGAVSAAPFGSASI 756 (954)
T ss_pred --hhcCCCEEEecCcccCCCCcCCCCCceEEEeeccc--cc-------ccCCCCccCcCC--CCCCcCcchhHHHHHHHH
Confidence 12289999999999998887744 8888742 21 233221100000 0000111122222 3
Q ss_pred cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cC--CCceEEEEEecCCCCCcccchHHHHHHHHHH
Q 041829 357 SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV--TP--RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDI 432 (486)
Q Consensus 357 ~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~--~~--~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l 432 (486)
++.+|+.++.+|.+|+++..+++..+|+|++++|++. +++. .+ +..+.++|++.+.... .+..+.++.++|
T Consensus 757 ~~~a~~yi~~~G~~Glr~~a~~~~~~A~Yl~~~L~~~--~~~~~~~~~~~~~~e~i~~~~~~~~~---~g~~~~di~krL 831 (954)
T PRK05367 757 LPISWMYIRMMGAEGLRQATEVAILNANYIAKRLKDH--YPVLYTGANGRVAHECILDLRPLKES---TGITVDDIAKRL 831 (954)
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHhh--cCccccCCCCCcccceEEEeeccccc---CCCCHHHHHHHH
Confidence 4578999999999999999999999999999999875 4442 22 3455666766431100 112236788889
Q ss_pred HccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 433 NSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 433 ~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+.|....+ ..+...+.+|+++ +..++++|||+++++|..+.+++.+
T Consensus 832 ~d~G~~~~t-~~~pv~~~l~i~p-tE~~s~~elDr~~~al~~i~~e~~~ 878 (954)
T PRK05367 832 IDYGFHAPT-MSFPVAGTLMVEP-TESESKAELDRFCDAMIAIRAEIDE 878 (954)
T ss_pred HHCCCeEee-cCCccCCEEEEEe-eecCCHHHHHHHHHHHHHHHHHHHH
Confidence 888854433 2233345799999 8899999999999999999988775
No 22
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.97 E-value=6.9e-30 Score=261.41 Aligned_cols=381 Identities=15% Similarity=0.120 Sum_probs=251.1
Q ss_pred ChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHH------HHHHHHhcCcCccc
Q 041829 34 QPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFL------GEMLSAGLNIVGFS 107 (486)
Q Consensus 34 ~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~------~~~l~~~~n~~~~~ 107 (486)
-|++++...+.++|+++ +.+++++ ++.+...++.....+++++|.-..+...|..+ +++++. ++++...
T Consensus 31 ~p~~~~~~~~~~lp~~~-~~~~v~~---~~~~~~~~~~~~~~~~~~lg~g~~~~~~p~~~~~~~~~~~~~~~-y~~~~~~ 105 (447)
T PRK00451 31 IPEELRLKRPLDLPPGL-SEMELLR---HLRELAAKNKTAEEYPSFLGAGAYDHYIPAVVDHIISRSEFYTA-YTPYQPE 105 (447)
T ss_pred CCHHHHhCCCCCCCCCC-CHHHHHH---HHHHHHhcCCCcCcCcccCcccccCCcCcHHHHHHHhchhHHHh-cCCCCCc
Confidence 47788888888999976 9999999 88777666654455788888422222222222 233333 4443322
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
..++..+...+...|+++++|++.+ .+++|+|||+++..++.+.+.. +++.|++++..|++
T Consensus 106 --~~~g~~~~~~e~~~~la~l~g~~~~-------~v~~~~g~t~~~~~~~~a~~~~----------~g~~Vlv~~~~~~~ 166 (447)
T PRK00451 106 --ISQGTLQAIFEYQTMICELTGMDVA-------NASMYDGATALAEAALMAVRIT----------KRKKVLVSGAVHPE 166 (447)
T ss_pred --cchHHHHHHHHHHHHHHHHhCCCcc-------eEEecCcHHHHHHHHHHHHHhc----------CCCEEEEeCccCHH
Confidence 2455666666777899999999875 5889999997654444433222 56778899999999
Q ss_pred HHHHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC
Q 041829 188 LQKACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG 263 (486)
Q Consensus 188 ~~~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g 263 (486)
+.++++. .|+ +++.+|+++ + .+|+++|+++++++ +.+|+++.+ |+||.++|+++|+++|+++|
T Consensus 167 ~~~~~~~~~~~~G~---~~~~v~~~~--~-~~d~~~l~~~i~~~------t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~ 233 (447)
T PRK00451 167 YREVLKTYLKGQGI---EVVEVPYED--G-VTDLEALEAAVDDD------TAAVVVQYP-NFFGVIEDLEEIAEIAHAGG 233 (447)
T ss_pred HHHHHHHHHHhCCc---EEEEecCCC--C-CCCHHHHHHhcCCC------eEEEEEECC-CCCCeeCCHHHHHHHHHHCC
Confidence 9888765 577 999999875 3 89999999998654 357788887 88999999999999999999
Q ss_pred CEEEe--eccccchhccCccchhcccCCcCCCceeeecccc-----cCCCCcceEEEEeCchHHHHHhcCCccccccccc
Q 041829 264 MWFHV--DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKW-----FLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKAS 336 (486)
Q Consensus 264 ~~lhv--D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~-----l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~ 336 (486)
+|++| |....+ .+..+ +.-++|.++.++||| +++| ++|+++++++ .+. .+. +.+.....
T Consensus 234 ~~~iv~~d~~~~g-~~~~~-------~~~~~D~~~~s~~k~~~~~~~~Gp-g~G~l~~~~~-~~~-~~~---~~~~g~~~ 299 (447)
T PRK00451 234 ALFIVGVDPVSLG-LLKPP-------GEYGADIVVGEGQPLGIPLSFGGP-YLGFFATRKK-LVR-QMP---GRLVGETV 299 (447)
T ss_pred CEEEEEcChHHhc-cCCCc-------ccCCCCEEEECCCcCCCCCCCCCC-CchHHHhhHH-HHh-hCC---CCEeeeec
Confidence 99998 644222 11111 112799999999997 4445 7888887653 222 221 11100000
Q ss_pred ccCCccCC----------CCCccC----CCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 337 QANMVVDY----------KDWQIP----LGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 337 ~~~~~~~~----------~~~~~~----~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
+..+...+ ..+... +++. ..+++.+.+++.++.+|++++.++..++++++.+.|+++++++++..
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aaa~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~g~~~~~~ 379 (447)
T PRK00451 300 DADGKRGFVLTLQAREQHIRREKATSNICTNQALNALAAAIYMSLLGPEGLRELAEQNHQKAHYLAERLAEIGGVELFDG 379 (447)
T ss_pred ccCCCeeeEeeccccccccccccccccccccHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHhhcCCEEecCC
Confidence 00000000 000000 1110 11245555677789999999999999999999999999999998744
Q ss_pred CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEE-EEeeeE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 402 RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIF-ISHTVL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 402 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+.+..+++++.. + ..++.++|.++|++. +....+ ....++|+++ +.++|++|+++++++|+++.
T Consensus 380 ~~~~~~~v~~~~--------~--~~~~~~~L~~~gi~~~~~~~~~~~~~~~~~rvs~-~~~~t~e~i~~l~~~L~~~~ 446 (447)
T PRK00451 380 PFFNEFVVRLPK--------P--AEEVNEALLEKGILGGYDLGRYYPELGNHLLVCV-TEKRTKEDIDALVAALGEVL 446 (447)
T ss_pred CeEEEEEEecCC--------C--HHHHHHHHHhcCCCCCcccccccCCcCCEEEEec-CCCCCHHHHHHHHHHHHHHh
Confidence 444555565521 1 146777888777542 111111 1125899999 88899999999999998753
No 23
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.97 E-value=6.5e-29 Score=249.09 Aligned_cols=340 Identities=17% Similarity=0.147 Sum_probs=234.5
Q ss_pred ccccCCCCCCHHHHHHHHHHHhcC----cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHH
Q 041829 79 YFAYYPSNSSVAGFLGEMLSAGLN----IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVL 154 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~ 154 (486)
||++-.+++.++.+ .+.+..++. ++...+..++...++.+++++++++++|.+++ ..++|+|||+++.
T Consensus 2 yld~aa~~~~~~~v-~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~t~~~t~a~~ 73 (379)
T TIGR03402 2 YLDNNATTRVDPEV-LEAMLPYFTEYFGNPSSMHSFGGEVGKAVEEAREQVAKLLGAEPD-------EIIFTSGGTESDN 73 (379)
T ss_pred cCCCcCCCCCCHHH-HHHHHHHHHhcCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHH
Confidence 55555444444443 444443332 11222233455677788899999999998764 5899999999999
Q ss_pred HHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH---hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCC
Q 041829 155 VVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI---GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIG 231 (486)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g 231 (486)
.++.+..... + ++++|+++..+|+++...+.. .|+ +++.+|++++ +.+|+++|++++++.
T Consensus 74 ~al~~~~~~~-~-------~~~~vv~~~~~~~s~~~~~~~~~~~G~---~v~~v~~~~~--g~~~~~~l~~~i~~~---- 136 (379)
T TIGR03402 74 TAIKSALAAQ-P-------EKRHIITTAVEHPAVLSLCQHLEKQGY---KVTYLPVDEE--GRLDLEELRAAITDD---- 136 (379)
T ss_pred HHHHHHHHhc-C-------CCCeEEEcccccHHHHHHHHHHHHcCC---EEEEEccCCC--CcCCHHHHHHhcCCC----
Confidence 8887654311 1 456788899999987765443 488 9999998754 589999999998653
Q ss_pred CccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceE
Q 041829 232 LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSA 311 (486)
Q Consensus 232 ~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~ 311 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|+|++++.+....+- .. .++|++++++|| +++|.|+|+
T Consensus 137 --~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~-~~-----~~~D~~~~s~~K-~~gp~G~g~ 207 (379)
T TIGR03402 137 --TALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDL-KE-----MNIDMLSLSGHK-LHGPKGVGA 207 (379)
T ss_pred --cEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCc-cc-----CCCCEEEEcHHH-cCCCCceEE
Confidence 458888999999999999999999999999999999999865543321 11 279999999999 678999999
Q ss_pred EEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-C-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Q 041829 312 LWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-F-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGL 389 (486)
Q Consensus 312 l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 389 (486)
+++++... .. +++..... ....+.+.. . ..+.+..+++.. .+++++..++..++++++++.
T Consensus 208 l~v~~~~~------~~-p~~~g~~~---------~~~~~~gt~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~ 270 (379)
T TIGR03402 208 LYIRKGTR------FR-PLLRGGHQ---------ERGRRAGTENVPGIVGLGKAAELA-TEHLEEENTRVRALRDRLEAG 270 (379)
T ss_pred EEECCCCC------CC-CcccCCcc---------CCCcCCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHH
Confidence 99986421 11 22211100 001111211 1 123344445443 456788888999999999999
Q ss_pred Hhc-CCCeEEecCCC---ceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE--------------------
Q 041829 390 VAQ-DLRFEVVTPRI---FSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL-------------------- 445 (486)
Q Consensus 390 l~~-~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~-------------------- 445 (486)
|++ +|++++..++. .+++.|.+.... ..++...|.+.| +.+.+...
T Consensus 271 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~l~~~g-I~v~~g~~c~~~~~~~~~~~~~lg~~~~ 340 (379)
T TIGR03402 271 LLARIPDARLNGDPTKRLPNTVNISFEYIE---------GEAILLLLDMEG-ICASSGSACTSGSLEPSHVLRAMGVPHT 340 (379)
T ss_pred HHhhCCCEEEeCCCccCCCCEEEEEecCCC---------HHHHHHhhccCC-EEEEchhhcCCCCCCcCHHHHHcCCChh
Confidence 986 89999876432 246777764321 145666676666 44443210
Q ss_pred CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 446 SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 446 ~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
...+.+|+|+ ++++|++|||++++.|+++.+++.
T Consensus 341 ~~~~~vR~S~-~~~~t~~di~~~~~~l~~~~~~~~ 374 (379)
T TIGR03402 341 AAHGSIRFSL-SRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred hcCceEEEEc-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 0125899999 999999999999999999887654
No 24
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.97 E-value=1.3e-28 Score=249.08 Aligned_cols=351 Identities=16% Similarity=0.131 Sum_probs=241.2
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcC-----cCccccccChhhHHHHHHHHHHHHHHcCC-CCCCcCCCCCCeEEcCchhH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLN-----IVGFSWITSPAATELEMIVLDWLAKLLKL-PEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n-----~~~~~~~~~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~~~t~ggt~ 151 (486)
-|+++-.+++.+..++ +.+..++. .....+..++...+..+++++.+++++|. +++ +.++|+|+|+
T Consensus 25 iYld~a~~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~~-------~v~~t~g~t~ 96 (406)
T PRK09295 25 AYLDSAASAQKPSQVI-DAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQAALFINARSAE-------ELVFVRGTTE 96 (406)
T ss_pred EEEeCcccccCCHHHH-HHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHcCcCCCC-------eEEEeCCHHH
Confidence 5777766555544443 44433332 21223444566677777888999999997 333 5899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH----HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL----QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
++..++.+......+ +++.|+++...|++. ...++..|+ +++.+|++++ +.+|+++|+++++++
T Consensus 97 ~l~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~ 164 (406)
T PRK09295 97 GINLVANSWGNSNVR-------AGDNIIISEMEHHANIVPWQMLCARVGA---ELRVIPLNPD--GTLQLETLPALFDER 164 (406)
T ss_pred HHHHHHHHhhhhcCC-------CcCEEEECcchhhHHHHHHHHHHHHcCc---EEEEEecCCC--CCCCHHHHHHhcCCC
Confidence 987766543211111 567899999998764 456677898 9999998754 589999999998653
Q ss_pred HhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC
Q 041829 228 LTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF 307 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~ 307 (486)
+.+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ ... .++|++++++|| +++|.
T Consensus 165 ------t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~-~~~-----~~~D~~~~s~~K-~~gp~ 231 (406)
T PRK09295 165 ------TRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVD-VQA-----LDCDFYVFSGHK-LYGPT 231 (406)
T ss_pred ------cEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccC-chh-----cCCCEEEeehhh-ccCCC
Confidence 45899999999999999999999999999999999999977654332 111 168999999999 55688
Q ss_pred cceEEEEeCchHHHHHhcCCccccccccc----ccCCccCC--CCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHH
Q 041829 308 DCSALWVKDRNTLIQSLSTNPEFLKNKAS----QANMVVDY--KDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNH 379 (486)
Q Consensus 308 ~~g~l~~r~~~~~~~~~~~~~~yl~~~~~----~~~~~~~~--~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~ 379 (486)
|+|+++++++. +.. + +++...... .......+ ....++.|.+ ...+++..+++.+...|++++.++.
T Consensus 232 G~G~l~~~~~~-~~~-~---~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~ 306 (406)
T PRK09295 232 GIGILYVKEAL-LQE-M---PPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYE 306 (406)
T ss_pred CcEEEEEchHh-Hhh-C---CCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 99999997642 221 1 222211100 00000000 1112233333 2335777888877667888888999
Q ss_pred HHHHHHHHHHHhcCCCeEEecC-CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---------CCEe
Q 041829 380 IQLAKHFEGLVAQDLRFEVVTP-RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---------SGKY 449 (486)
Q Consensus 380 ~~~a~~l~~~l~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~ 449 (486)
.++++++++.|+++++++++.+ ...++++|.+.... ...+.+.|.+.| +.+..... ...+
T Consensus 307 ~~l~~~l~~~l~~~~~~~~~~~~~~~~iv~~~~~~~~---------~~~~~~~L~~~g-I~v~~g~~c~~~~~~~~~~~~ 376 (406)
T PRK09295 307 QNLMHYALSQLESVPDLTLYGPQNRLGVIAFNLGKHH---------AYDVGSFLDNYG-IAVRTGHHCAMPLMAYYNVPA 376 (406)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCceEEEEEECCcC---------HHHHHHHHHhCC-eEEeccccchHHHHHHHCCCC
Confidence 9999999999999999999864 24678888875311 134555666666 44433211 1124
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 450 ILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 450 ~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
++|+|+ ++++|++|||+++++|+++..
T Consensus 377 ~iRiS~-~~ynt~~did~l~~~l~~i~~ 403 (406)
T PRK09295 377 MCRASL-AMYNTHEEVDRLVAGLQRIHR 403 (406)
T ss_pred EEEEEc-cCCCCHHHHHHHHHHHHHHHH
Confidence 799999 999999999999999998754
No 25
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.97 E-value=1.4e-28 Score=248.58 Aligned_cols=355 Identities=15% Similarity=0.091 Sum_probs=244.3
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcCcC-----ccccccChhhHHHHHHHHHHHHHHcCC-CCCCcCCCCCCeEEcCchh
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLNIV-----GFSWITSPAATELEMIVLDWLAKLLKL-PEDFLSSGQGGGVIQGTAS 150 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~-----~~~~~~~~~~~~le~~~~~~la~l~g~-~~~~~~~~~~~~~~t~ggt 150 (486)
..|+++-..++.+.. +.+.+..++... ...+..+....+..+++++.+++++|. +++ +.++++|+|
T Consensus 20 ~~yld~a~~~~~~~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~~~~~t 91 (401)
T PRK10874 20 GVYLDSAATALKPQA-VIEATQQFYSLSAGNVHRSQFAAAQRLTARYEAAREQVAQLLNAPDAK-------NIVWTRGTT 91 (401)
T ss_pred eEEEeCCcccCCCHH-HHHHHHHHHHhccCCCCCcccHHHHHHHHHHHHHHHHHHHHcCCCCCC-------EEEEECCHH
Confidence 357777666554444 334444444321 122333455677788888999999998 443 588999999
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh----HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHH
Q 041829 151 EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA----LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISR 226 (486)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s----~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~ 226 (486)
+++..++.+......+ +++.|++++..|++ +...++..|+ +++.+|++.+ +.+|++++++++++
T Consensus 92 ~~i~~~~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~ 159 (401)
T PRK10874 92 ESINLVAQSYARPRLQ-------PGDEIIVSEAEHHANLVPWLMVAQQTGA---KVVKLPLGAD--RLPDVDLLPELITP 159 (401)
T ss_pred HHHHHHHHHhhhccCC-------CcCEEEECCcchHHHHHHHHHHHHHhCC---EEEEEecCCC--CcCCHHHHHHhcCc
Confidence 9887766554211001 56789999999976 3456677899 9999998753 58999999999965
Q ss_pred HHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC
Q 041829 227 DLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN 306 (486)
Q Consensus 227 ~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p 306 (486)
+ +.+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ . ..+ ++|.+++++||+ ++|
T Consensus 160 ~------t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~-~----~~~-~~d~~~~s~~K~-~gp 226 (401)
T PRK10874 160 R------TRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPAD-V----QAL-DIDFYAFSGHKL-YGP 226 (401)
T ss_pred C------cEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCC-c----hhc-CCCEEEEecccc-cCC
Confidence 4 35889999999999999999999999999999999999975544322 1 112 589999999995 568
Q ss_pred CcceEEEEeCchHHHHHhcCCccccccccc-ccC--CccCC--CCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKAS-QAN--MVVDY--KDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNH 379 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~-~~~--~~~~~--~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~ 379 (486)
.|+|+++++++ .+.. + .++...... ... ..+.+ ..+.++.|.. ...+++..+++.+...|+.+..++.
T Consensus 227 ~G~G~l~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~~~ 301 (401)
T PRK10874 227 TGIGVLYGKSE-LLEA-M---SPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAESWS 301 (401)
T ss_pred CccEEEEEchH-HHhc-C---CCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHH
Confidence 89999988753 2322 1 122211000 000 00000 1122233322 2345677777777677888888899
Q ss_pred HHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE--------CCEeEE
Q 041829 380 IQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL--------SGKYIL 451 (486)
Q Consensus 380 ~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--------~~~~~l 451 (486)
.++++++.+.|+++|+++++.++..++++|.+... + ..++.+.|.++|.++.++... ...+++
T Consensus 302 ~~l~~~l~~~l~~~~g~~~~~~~~~~i~~~~~~~~-------~--~~~~~~~L~~~gI~v~~g~~~~~~~~~~~g~~~~i 372 (401)
T PRK10874 302 RSLATLAEDALAKLPGFRSFRCQDSSLLAFDFAGV-------H--HSDLVTLLAEYGIALRAGQHCAQPLLAALGVTGTL 372 (401)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCCCcEEEEEECCc-------C--HHHHHHHHHHCCcEEeccccchHHHHHHhCCCCEE
Confidence 99999999999999999988777778888887431 1 145667777777443332211 123689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
|+|+ +.++|++||++++++|+++++.+
T Consensus 373 RiS~-~~~nt~edid~ll~al~~~~~~~ 399 (401)
T PRK10874 373 RASF-APYNTQSDVDALVNAVDRALELL 399 (401)
T ss_pred EEEe-cccCCHHHHHHHHHHHHHHHHHh
Confidence 9999 88899999999999999887653
No 26
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.97 E-value=1.6e-28 Score=247.89 Aligned_cols=353 Identities=15% Similarity=0.073 Sum_probs=242.5
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCc---C--ccccccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNI---V--GFSWITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~---~--~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~ 151 (486)
-|+++-..++.+. .+.+.+..+++. + ...+..++...+...++++.+++++|.+ ++ +.++|+|+|+
T Consensus 18 iyld~a~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~~-------~i~~t~g~t~ 89 (398)
T TIGR03392 18 VYLDSAATALKPQ-AVIDATQQFYRLSSGTVHRSQHQQAQSLTARYELARQQVARFLNAPDAE-------NIVWTRGTTE 89 (398)
T ss_pred EEeeCccccCCCH-HHHHHHHHHHHhcCCCCCCcccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCChHH
Confidence 5777765555443 445555454421 1 1223334455667778888999999985 33 5889999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH----HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL----QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
++..++.+......+ +++.|++++.+|++. ...++..|+ +++.+|++.+ +.+|+++|++++++.
T Consensus 90 ~l~~~~~~~~~~~~~-------~gd~Vl~~~~~~~s~~~~~~~~~~~~g~---~v~~v~~~~~--~~~~~~~l~~~i~~~ 157 (398)
T TIGR03392 90 SINLVAQSYARPRLQ-------PGDEIIVSEAEHHANLIPWLMVAQQTGA---KVVKLPIGAD--LLPDIRQLPELLTPR 157 (398)
T ss_pred HHHHHHHHhhhccCC-------CCCEEEECCcchhHHHHHHHHHHHHcCc---EEEEEecCCC--CCcCHHHHHHHhccC
Confidence 987777654210000 567899999999873 456678899 9999999754 589999999998654
Q ss_pred HhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC
Q 041829 228 LTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF 307 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~ 307 (486)
+.+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ .. .+ ++|.+++++||+ ++|.
T Consensus 158 ------t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~----~~-~~d~~~~s~~K~-~gp~ 224 (398)
T TIGR03392 158 ------TRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPD-VQ----AL-DIDFYAFSGHKL-YGPT 224 (398)
T ss_pred ------ceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCC-hh----hc-CCCEEEEecccc-cCCC
Confidence 35788899999999999999999999999999999999976543221 11 11 589999999995 5688
Q ss_pred cceEEEEeCchHHHHHhcCCccccccccc---ccCCccCC--CCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHH
Q 041829 308 DCSALWVKDRNTLIQSLSTNPEFLKNKAS---QANMVVDY--KDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHI 380 (486)
Q Consensus 308 ~~g~l~~r~~~~~~~~~~~~~~yl~~~~~---~~~~~~~~--~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~ 380 (486)
|+|++++++. .+.+ + .++...... .....+.+ ..+.++.|.. ...+++..+++.+...|++++.++..
T Consensus 225 G~G~l~~~~~-~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~~~~ 299 (398)
T TIGR03392 225 GIGVLYGKTE-LLEA-M---PPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSV 299 (398)
T ss_pred ceEEEEEcHH-HHhh-C---CCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 9999987653 2322 2 122111000 00000000 0112233332 13457777777776678888889999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---------CCEeEE
Q 041829 381 QLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---------SGKYIL 451 (486)
Q Consensus 381 ~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~~l 451 (486)
++++++.+.|+++|++++..++...+++|.+... + ...+.+.|.++| +.+..... ...+++
T Consensus 300 ~l~~~l~~~l~~l~g~~~~~~~~~~i~~~~~~~~-------~--~~~l~~~L~~~g-I~v~~g~~~~~~~~~~~g~~~~i 369 (398)
T TIGR03392 300 SLADLAEERLAQLPGFRSFRCPGSSLLAFDFAGV-------H--HSDLAALLAESG-IALRAGQHCAQPLMAALGVSGTL 369 (398)
T ss_pred HHHHHHHHHHhcCCCeEEeCCCCCcEEEEEeCCc-------C--HHHHHHHHHhCC-EEEecCccchHHHHHHhCCCCEE
Confidence 9999999999999999988767777888886431 1 145677777776 55543321 113589
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
|+|+ ++++|++||++++++|+++++.+
T Consensus 370 RvS~-~~~~t~~ei~~l~~~l~~~~~~~ 396 (398)
T TIGR03392 370 RASF-APYNTQQDVDALVDAVGAALELL 396 (398)
T ss_pred EEEe-eccCCHHHHHHHHHHHHHHHHHh
Confidence 9999 88999999999999999887653
No 27
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.97 E-value=1.2e-28 Score=246.69 Aligned_cols=317 Identities=14% Similarity=0.124 Sum_probs=225.2
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
.+..++.......++++++++++|.+ +. ..++|+|+|+++..++.+..... .+++.|+++..+|
T Consensus 34 ~~~~~~~~~~~~~~~~~~la~~~~~~~~~-------~v~~~~g~t~a~~~~~~~l~~~~--------~~g~~vl~~~~~~ 98 (373)
T cd06453 34 VHELSARATDAYEAAREKVARFINAPSPD-------EIIFTRNTTEAINLVAYGLGRAN--------KPGDEIVTSVMEH 98 (373)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHhCCCCCC-------eEEEeCCHHHHHHHHHHHhhhcC--------CCCCEEEECcchh
Confidence 44556777888888999999999987 33 58899999999888776654310 1456788899999
Q ss_pred hhH----HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 186 SAL----QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 186 ~s~----~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
++. ...++..|+ +++.||++.+ +.+|+++|++++.++ +.+|++++++|++|.+.|+++|.++|++
T Consensus 99 ~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~------~~~v~~~~~~~~tG~~~~~~~i~~~~~~ 167 (373)
T cd06453 99 HSNIVPWQQLAERTGA---KLKVVPVDDD--GQLDLEALEKLLTER------TKLVAVTHVSNVLGTINPVKEIGEIAHE 167 (373)
T ss_pred HHHHHHHHHHHhhcCc---EEEEeecCCC--CCcCHHHHHHHhcCC------ceEEEEeCcccccCCcCCHHHHHHHHHH
Confidence 885 345567788 9999998753 589999999998653 4588899999999999999999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccccccccccc---
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQA--- 338 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~--- 338 (486)
+|+++|+|++++.+....+ ... .++|++++++|||++. .++|++++++. .+.. +. ++........
T Consensus 168 ~~~~li~D~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~~~-~g~g~~~~~~~-~~~~-~~---~~~~g~~~~~~~~ 235 (373)
T cd06453 168 AGVPVLVDGAQSAGHMPVD-VQD-----LGCDFLAFSGHKMLGP-TGIGVLYGKEE-LLEE-MP---PYGGGGEMIEEVS 235 (373)
T ss_pred cCCEEEEEhhhhcCceeee-ccc-----cCCCEEEeccccccCC-CCcEEEEEchH-Hhhc-CC---CeecCCCcccccc
Confidence 9999999999976543221 111 1689999999999987 67898888653 2322 21 1111000000
Q ss_pred --CCccCCCCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CceEEEEEec
Q 041829 339 --NMVVDYKDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR--IFSLVCFRLL 412 (486)
Q Consensus 339 --~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~--~~~~v~f~~~ 412 (486)
...+......++.+.+ ...+++|.+++.+..++++++.++..++++++++.|+++|+++++.++ ..++++|.+.
T Consensus 236 ~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 315 (373)
T cd06453 236 FEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFNLE 315 (373)
T ss_pred ccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCccccCCeEEEEEC
Confidence 0000000001111111 234678888998888899999999999999999999999999987532 4567888864
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---------CCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---------SGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
.. ...++.+.|.+.| +.+.+... ....++|+++ ++.+|++|+|+++++|
T Consensus 316 ~~---------~~~~i~~~l~~~g-i~i~~g~~~~~~~~~~~~~~~~iRis~-~~~~t~~di~~~~~~l 373 (373)
T cd06453 316 GI---------HPHDVATILDQYG-IAVRAGHHCAQPLMRRLGVPGTVRASF-GLYNTEEEIDALVEAL 373 (373)
T ss_pred Cc---------CHHHHHHHHHHCC-EEeccCccchhHHHHHhCCCCeEEEEe-cCCCCHHHHHHHHhhC
Confidence 21 1246777777777 44433211 1235899999 8999999999999875
No 28
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.97 E-value=1.1e-28 Score=245.61 Aligned_cols=319 Identities=15% Similarity=0.133 Sum_probs=216.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh-HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS-EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
.++....+..+...++++++|.+.. ..++++++|| +++.+++.+++.+. .++..|+++..+|.|+
T Consensus 99 gss~~~~l~~~~e~~~~~~~G~~~~------~~a~~v~~~Tg~al~laL~alr~~~--------~~gd~VI~p~~th~S~ 164 (444)
T TIGR03531 99 GSSLLYKLTNKLVKDFLKLLGLRSI------KSAFVVPLATGMSLSLCLSALRHKR--------PKAKYVIWPRIDQKSC 164 (444)
T ss_pred CccHHHHHHHHHHHHHHHHcCCCCC------CEEEEECCHHHHHHHHHHHHcCCcC--------CCCCEEEEECcChHHH
Confidence 4566788999999999999999842 1378899999 78888888766421 0245677788899999
Q ss_pred HHHHHHhCCCCCCeEEEeC--CCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 189 QKACQIGGIHPQNFRVLKT--DSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 189 ~~a~~~~g~g~~~v~~v~~--~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
.+++.++|+ +++.||+ ++ ++|.||+++|+++|++.+. ..+.+|+.+.++...|..||+++|+++|++||+|+
T Consensus 165 ~kAi~~~G~---~pv~Vd~~~d~-~~~~iD~e~Le~aIt~~~~--kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~l 238 (444)
T TIGR03531 165 IKAISTAGF---EPRVIETVLDG-DELTTDVEDIERAIEEIGP--DNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPH 238 (444)
T ss_pred HHHHHHcCC---eEEEeeeeecC-cCCCcCHHHHHHHHHhccC--CCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEE
Confidence 999999999 9999995 33 3599999999999985321 23445555555566678999999999999999999
Q ss_pred EeeccccchhccCccchhcc-cCC--cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 267 HVDAAYAGSACICPEYRQYI-DGV--EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~-~~~--~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
|||+|||... +...+.. .+. ..+|++++++||++.+|.++|++++++++.+... .. .|...
T Consensus 239 IvDaAyg~~~---~~~~~~~~~g~~~Grad~vv~s~hK~l~~pg~Gg~I~~~d~el~~~i-~~--~y~g~---------- 302 (444)
T TIGR03531 239 IVNNAYGLQS---NKYMELINKAIKVGRVDAVVSSTDKNFMVPVGGAIIYSFDENFIQEI-SK--SYPGR---------- 302 (444)
T ss_pred EEECcCcCcC---hhhhhhhhccccccCCCeEEEeCccCCCCCCCEEEEEECCHHHHHHH-HH--hccCC----------
Confidence 9999998633 2222222 222 2589999999999999999999989888755432 21 12100
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCceEEEEEecCCCCCccc
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL---RFEVVTPRIFSLVCFRLLPPHNDEDH 420 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~ 420 (486)
.....++.+|+++..+|.+++++++++..++++++.+.|+++. |.+++..|. |-+++.+.-......+
T Consensus 303 --------~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~~L~~l~~~~~~~~~~~~~-n~is~~~~~~~~~~~~ 373 (444)
T TIGR03531 303 --------ASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKELLQKLAERHGERLLDTPE-NPISSAMTLSTLKGKD 373 (444)
T ss_pred --------CCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcEeecCCC-CceeEEEecccccccC
Confidence 0112357899999999999999999999999999999998752 456664443 2233332211100111
Q ss_pred chHHHHHHHHHHHccCcEEEEeee---ECCE--------------eEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFISHTV---LSGK--------------YILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~~---~~~~--------------~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
...+-..|+.+-. +|.-.+.++. +.|. .|+-++. ...++++|||.+++.|+++
T Consensus 374 ~~~~g~~l~~~~v-~g~r~v~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~-~~g~~~~~~~~~~~~l~~~ 443 (444)
T TIGR03531 374 PTMLGSMLYSRRV-TGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAA-AIGMTKEDVDTFVSRLEKS 443 (444)
T ss_pred HHHHHHHHHhCCC-CCceeecCCCceEECCEEeecccccccCCCchhHHHHH-HhCCcHHHHHHHHHHHhhc
Confidence 2222223322211 2211222221 1111 2333333 4467999999999999875
No 29
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.97 E-value=1.3e-28 Score=246.93 Aligned_cols=312 Identities=15% Similarity=0.186 Sum_probs=223.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH---
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK--- 190 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--- 190 (486)
......++.+++++++|.+.. ...++|+|+|+++..++.+... +++.|+++..+|.++..
T Consensus 42 ~~~~~~~~~~~la~~~~~~~~------~~v~~~~g~t~al~~~~~~~~~-----------~gd~vl~~~~~~~~~~~~~~ 104 (376)
T TIGR01977 42 ASREVEETRQLLAKLFNAPSS------AHVVFTNNATTALNIALKGLLK-----------EGDHVITTPMEHNSVARPLE 104 (376)
T ss_pred HHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHHHHHHHHhccC-----------CCCEEEECcchhhHHHHHHH
Confidence 345666777889999998643 1488999999988777654221 56788889889988654
Q ss_pred -HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 191 -ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 191 -a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.++..|+ +++.++.+.+ +.+|+++|+++++++ +.+|++++++|+||.+.|+++|.++|+++|++++||
T Consensus 105 ~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~~~~~------~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD 173 (376)
T TIGR01977 105 CLKEQIGV---EITIVKCDNE--GLISPERIKRAIKTN------TKLIVVSHASNVTGTILPIEEIGELAQENGIFFILD 173 (376)
T ss_pred HHHHHcCc---EEEEEecCCC--CCcCHHHHHHhcCCC------CeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEE
Confidence 4555688 9999998753 589999999998543 468899999999999999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+|++.+....+- . ..++|++++++|||+++|.|+|++++++...+.........+ ........ .... ..+
T Consensus 174 ~a~~~g~~~~~~-~-----~~~~D~~~~s~~K~l~~p~g~g~l~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~-~r~ 243 (376)
T TIGR01977 174 AAQTAGVIPIDM-T-----ELAIDMLAFTGHKGLLGPQGTGGLYIREGIKLKPLKSGGTGS-HSALIDQP--SELP-DRF 243 (376)
T ss_pred hhhccCccCCCc-h-----hcCCCEEEecccccccCCCCceEEEEcCCcCcCceecCCCcc-cccccccc--ccch-hhc
Confidence 999876654321 1 127999999999999999999999998865221111100000 00000000 0000 011
Q ss_pred CCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----CceEEEEEecCCCCCcccchH
Q 041829 350 PLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR----IFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 350 ~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~ 423 (486)
+.+.. ....+++.+++.+...|++.+.++..++++++++.|++.++++++.+. ..++++|.+... +
T Consensus 244 ~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~v~~~~~~~-------~- 315 (376)
T TIGR01977 244 ESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEKLLNGLREINKVKIYGPADPANRVGVVSFTVEGI-------D- 315 (376)
T ss_pred cCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcCCCeEEeCCCCccccCCeEEEEECCC-------C-
Confidence 22222 123567778888888899999999999999999999999999988642 356888887431 1
Q ss_pred HHHHHHHHHHcc-CcEEEEeeeE-----------CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINST-GKIFISHTVL-----------SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 424 ~~~~l~~~l~~~-g~~~~~~~~~-----------~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..++.+.|.+. | +.+..... ....++|+++ +.++|++||++++++|++
T Consensus 316 -~~~~~~~L~~~~g-i~v~~g~~~~~~~~~~~g~~~~~~iRis~-~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 316 -SEEVADILDEKFD-IATRTGLHCAPLAHKTIGTFATGTIRLSL-GYFNTEEEIEKLLEALSE 375 (376)
T ss_pred -HHHHHHHHhccCC-EEEEcccccchHHHHHhCCCCCCeEEEec-CCCCCHHHHHHHHHHHhh
Confidence 24577777776 5 55543221 1235899998 899999999999999975
No 30
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.97 E-value=2.2e-28 Score=247.34 Aligned_cols=354 Identities=16% Similarity=0.140 Sum_probs=239.2
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCc-----CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNI-----VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEA 152 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a 152 (486)
.|+++-..++.+. .+.+.+..++.. ....+..++...+..+++++.+++++|.+.. .+.++|+|+|++
T Consensus 20 ~yld~~~~~~~p~-~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~ia~~~~~~~~------~~v~~~~g~t~~ 92 (403)
T TIGR01979 20 VYLDSAATSQKPQ-QVIDAVAEYYRNSNANVHRGIHTLSVRATEAYEAVREKVAKFINAASD------EEIVFTRGTTES 92 (403)
T ss_pred EEEeCccccCCCH-HHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHHHHHHHHHHhCcCCC------CeEEEeCCHHHH
Confidence 4666654444333 344555444321 1122333445556667788889999998731 158999999998
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH
Q 041829 153 VLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL 228 (486)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~ 228 (486)
+..++.+......+ +++.|+++...|++.. +.++..|+ +++.+|++++ +.+|+++|+++++++
T Consensus 93 l~~~~~~~~~~~~~-------~g~~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~- 159 (403)
T TIGR01979 93 INLVAYSWGDSNLK-------AGDEIVISEMEHHANIVPWQLLAERTGA---TLKFIPLDDD--GTLDLDDLEKLLTEK- 159 (403)
T ss_pred HHHHHHHhhhhcCC-------CCCEEEECcchhhHHHHHHHHHHHhcCc---EEEEEecCCC--CCCCHHHHHHHhccC-
Confidence 77666543221111 5678999999998743 56667888 9999998853 589999999998653
Q ss_pred hCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc
Q 041829 229 TIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD 308 (486)
Q Consensus 229 ~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~ 308 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|||++|+.+....+ .. .. ++|++++++||++ +|.|
T Consensus 160 -----~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~~-gp~G 227 (403)
T TIGR01979 160 -----TKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVD-VQ----AL-DCDFYVFSGHKMY-GPTG 227 (403)
T ss_pred -----CeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccC-cc----cc-CCCEEEEeccccc-CCCC
Confidence 46889999999999999999999999999999999999986554321 11 11 6899999999976 5889
Q ss_pred ceEEEEeCchHHHHHhcCCccccccccc-cc----CCccCCCCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHH
Q 041829 309 CSALWVKDRNTLIQSLSTNPEFLKNKAS-QA----NMVVDYKDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQ 381 (486)
Q Consensus 309 ~g~l~~r~~~~~~~~~~~~~~yl~~~~~-~~----~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~ 381 (486)
+|++++++. .+. .+ .++...... .. ...+....+.++.|.+ ...++++.+++.+...|++++.++..+
T Consensus 228 ~g~l~~~~~-~~~-~~---~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~~~~~ 302 (403)
T TIGR01979 228 IGVLYGKEE-LLE-QM---PPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEAHEHE 302 (403)
T ss_pred ceEEEEchH-HHh-cC---CCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 999988753 222 22 112111000 00 0000000111222222 123566777777766688888999999
Q ss_pred HHHHHHHHHhcCCCeEEecCC----CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee---------ECCE
Q 041829 382 LAKHFEGLVAQDLRFEVVTPR----IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV---------LSGK 448 (486)
Q Consensus 382 ~a~~l~~~l~~~~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---------~~~~ 448 (486)
+++++.+.|+++++++++.++ ..++++|.+.... ..++.+.|.+.| +.+.... +...
T Consensus 303 l~~~l~~~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~---------~~~~~~~L~~~g-I~v~~g~~~~~~~~~~~~~~ 372 (403)
T TIGR01979 303 LTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEGVH---------PHDVGTILDEEG-IAVRSGHHCAQPLMRRFGVP 372 (403)
T ss_pred HHHHHHHHHhcCCCEEEeCCCCccccCceEEEEeCCcC---------HHHHHHHHhhCC-EEEcchhhhhHHHHHHhCCC
Confidence 999999999999999998643 3678899875311 134666676677 4444321 1113
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 449 YILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 449 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.++|+++ +.++|++|+++++++|+++.+.+
T Consensus 373 ~~iRiS~-~~~~t~~di~~l~~~l~~~~~~~ 402 (403)
T TIGR01979 373 ATCRASF-YIYNTEEDIDALVEALKKVRKFF 402 (403)
T ss_pred CEEEEEe-ccCCCHHHHHHHHHHHHHHHHHh
Confidence 5899999 88999999999999999877654
No 31
>PLN02651 cysteine desulfurase
Probab=99.97 E-value=1.6e-28 Score=244.63 Aligned_cols=296 Identities=16% Similarity=0.157 Sum_probs=213.0
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
++...++.+++++.+++++|.+++ ..++|+|+|+++..++..+.....+ +++.|+++...|+++..
T Consensus 38 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~t~~~t~a~~~~l~~~~~~~~~-------~g~~vl~~~~~h~s~~~ 103 (364)
T PLN02651 38 GWESEDAVEKARAQVAALIGADPK-------EIIFTSGATESNNLAIKGVMHFYKD-------KKKHVITTQTEHKCVLD 103 (364)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccC-------CCCEEEEcccccHHHHH
Confidence 456677788889999999998764 5899999999998888776442211 56789999999999776
Q ss_pred HHHH---hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 191 ACQI---GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 191 a~~~---~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
.+.. .|+ +++.+|++++ +.+|+++|+++|+++ +.+|++++++|+||.+.|+++|+++||++|+++|
T Consensus 104 ~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~i~~~------t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~ 172 (364)
T PLN02651 104 SCRHLQQEGF---EVTYLPVKSD--GLVDLDELAAAIRPD------TALVSVMAVNNEIGVIQPVEEIGELCREKKVLFH 172 (364)
T ss_pred HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCC------cEEEEEECCCCCceecccHHHHHHHHHHcCCEEE
Confidence 5543 477 8999998754 589999999999654 3588999999999999999999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
||++++.+....+- . .+ ++|++++++||| ++|.|+|+++++++.. . ...+. +..... ..
T Consensus 173 vD~a~~~g~~~~~~-~----~~-~~D~~~~s~hK~-~gp~G~g~l~v~~~~~-~---~l~p~-~~g~~~---------~~ 231 (364)
T PLN02651 173 TDAAQAVGKIPVDV-D----DL-GVDLMSISGHKI-YGPKGVGALYVRRRPR-V---RLEPL-MSGGGQ---------ER 231 (364)
T ss_pred EEcchhhCCcccCc-c----cC-CCCEEEechhhh-CCCCceEEEEEcCCCC-C---CCCcc-ccCCCc---------cC
Confidence 99999887654431 1 12 689999999998 6899999999997531 1 11121 111100 00
Q ss_pred ccCCC-CC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEecC--CC---ceEEEEEecCCCCCcc
Q 041829 348 QIPLG-RR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ-DLRFEVVTP--RI---FSLVCFRLLPPHNDED 419 (486)
Q Consensus 348 ~~~~s-r~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~-~~~~~~~~~--~~---~~~v~f~~~~~~~~~~ 419 (486)
..+.| .. ...+++..+++.+- ++.+++.++..++++++.+.|++ +|+++++.+ +. .++++|.+....
T Consensus 232 ~~~~GT~~~~~~~~l~~al~~~~-~~~~~i~~~~~~l~~~l~~~l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~---- 306 (364)
T PLN02651 232 GRRSGTENTPLVVGLGAACELAM-KEMDYDEKHMKALRERLLNGLRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE---- 306 (364)
T ss_pred CccCCCccHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhhCCCEEEECCCCcccCcCCEEEEEeCCCC----
Confidence 11122 22 22356666776664 34588889999999999999985 789999874 22 358888875321
Q ss_pred cchHHHHHHHHHHHccCcEEEEeee---------------EC-----CEeEEEEEecCCCCCHHHHH
Q 041829 420 HGNKLNHKLLDDINSTGKIFISHTV---------------LS-----GKYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 420 ~~~~~~~~l~~~l~~~g~~~~~~~~---------------~~-----~~~~lRi~~~~~~~t~~di~ 466 (486)
..++...|.+ +.++... +. ..+.+|+|+ +++||++|||
T Consensus 307 -----~~~~~~~L~~---i~v~~g~~c~~~~~~~~~~~~~~g~~~~~~~~~vR~S~-~~~~t~~did 364 (364)
T PLN02651 307 -----GESLLMGLKE---VAVSSGSACTSASLEPSYVLRALGVPEEMAHGSLRLGV-GRFTTEEEVD 364 (364)
T ss_pred -----HHHHHHHhCC---EEEEchhhcCCCCCCcCHHHHHcCCChHHhCceEEEEc-CCCCCHHHcC
Confidence 1345555533 4443221 00 136899999 9999999985
No 32
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.96 E-value=3.4e-28 Score=245.34 Aligned_cols=342 Identities=16% Similarity=0.187 Sum_probs=226.5
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcC-c--Ccc--ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLN-I--VGF--SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n-~--~~~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
+.|+++-.+++.++.++ +.+..++. . +.. .+..+....+..+++++.+++++|.+++ ..+|++|+|+
T Consensus 4 ~~yld~aa~~~~~~~v~-~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~ 75 (402)
T TIGR02006 4 PIYLDYAATTPVDPRVA-EKMMPYLTEKFGNPASRSHSFGWEAEEAVENARNQVAELIGADSR-------EIVFTSGATE 75 (402)
T ss_pred cEEeeCCcCCCCCHHHH-HHHHHHHHhcCCCCChhhhHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHH
Confidence 35777765555555543 33333331 1 111 1112223345667778889999998764 5899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH---hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI---GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL 228 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~---~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~ 228 (486)
++..++.+......+ +++.|+++..+|+++..++.. .|+ +++.||++++ +.+|+++|++++++.
T Consensus 76 a~~~~l~~l~~~~~~-------~g~~Vi~~~~~h~s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~- 142 (402)
T TIGR02006 76 SNNLAIKGIAHFYKS-------KGNHIITSKTEHKAVLDTCRYLEREGF---EVTYLPPKSN--GLIDLEELKAAIRDD- 142 (402)
T ss_pred HHHHHHHHHHHhhcC-------CCCEEEECCCccHHHHHHHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhcCCC-
Confidence 998887665431111 567889999999998876644 477 9999998854 589999999988643
Q ss_pred hCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc
Q 041829 229 TIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD 308 (486)
Q Consensus 229 ~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~ 308 (486)
+.+|++++++|++|.+.|+++|+++|+++|+++|||++++.+....+- . . .++|++++++||++ +|.|
T Consensus 143 -----~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~-~----~-~~~D~~~~s~~K~~-gp~G 210 (402)
T TIGR02006 143 -----TILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINV-N----E-LKVDLMSISGHKIY-GPKG 210 (402)
T ss_pred -----CEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCc-c----c-cCCCEEEEehhhhc-CCCc
Confidence 358899999999999999999999999999999999999876654321 1 1 17999999999965 5999
Q ss_pred ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-C-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHH
Q 041829 309 CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-F-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHF 386 (486)
Q Consensus 309 ~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l 386 (486)
+|+++++++.... .. +.+..... ....+.+.. . ..+++..+++.+ .++++++.++..++++++
T Consensus 211 ~G~l~~~~~~~~~----~~-~~~~g~~~---------~~~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l 275 (402)
T TIGR02006 211 IGALYVRRKPRVR----LE-ALIHGGGH---------ERGMRSGTLPTHQIVGMGEAFRIA-KEEMAQDTAHVLALRDRL 275 (402)
T ss_pred eEEEEEccCCCCC----CC-ceecCCCc---------cCCccCCCccHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHH
Confidence 9999999753211 11 11111000 001111211 1 123444555554 356788889999999999
Q ss_pred HHHHhcCCCeEEecCC--Cc-e--EEEEEecCCCCCcccchHHHHHHHHHHH----ccCcEEEEeeeE------------
Q 041829 387 EGLVAQDLRFEVVTPR--IF-S--LVCFRLLPPHNDEDHGNKLNHKLLDDIN----STGKIFISHTVL------------ 445 (486)
Q Consensus 387 ~~~l~~~~~~~~~~~~--~~-~--~v~f~~~~~~~~~~~~~~~~~~l~~~l~----~~g~~~~~~~~~------------ 445 (486)
++.|++++++++..++ .. + .++|...+ .+ .+...+. ..|.. +++...
T Consensus 276 ~~~l~~~~~v~~~~~~~~~~p~~~~v~f~~~~-------~~----~~~~~l~~i~v~~G~~-c~~~~~~~~~~l~~lg~~ 343 (402)
T TIGR02006 276 LNGIKSIEEVYLNGDLEHRVPGNLNVSFNYVE-------GE----SLIMALKDLAVSSGSA-CTSASLEPSYVLRALGIN 343 (402)
T ss_pred HHHHhcCCCEEEeCCccccCCCeEEEEEeCcC-------HH----HHHHhcCCEEEechhh-cCCCCCCccHHHHHcCCC
Confidence 9999999999887532 22 2 34444221 12 2333331 12222 221100
Q ss_pred --CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 446 --SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 446 --~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
...+++|+|+ ++++|++|||+++++|+++.+++
T Consensus 344 ~~~~~~~vR~S~-~~~~t~edid~l~~~l~~~~~~~ 378 (402)
T TIGR02006 344 DELAHSSIRFTI-GRFTTEEEIDYAVKLVKSAIDKL 378 (402)
T ss_pred hhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 0136899999 89999999999999999998765
No 33
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.96 E-value=2.2e-27 Score=241.23 Aligned_cols=356 Identities=15% Similarity=0.096 Sum_probs=239.4
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcCc---Cc--cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLNI---VG--FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~---~~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
..|+++-..++ ++..+.+.+..++.. +. ..+..+....+..+++++.+++++|.++. .+.++|+|+|+
T Consensus 33 ~iyLd~a~~~~-~p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~la~~~~~~~~------~~v~~t~g~t~ 105 (424)
T PLN02855 33 LVYLDNAATSQ-KPAAVLDALQDYYEEYNSNVHRGIHALSAKATDAYELARKKVAAFINASTS------REIVFTRNATE 105 (424)
T ss_pred eEEeeCccccC-CCHHHHHHHHHHHHhcCCCCCCccchHHHHHHHHHHHHHHHHHHHcCCCCC------CEEEEeCCHHH
Confidence 46777754444 334444555444422 11 11122334455567788889999998532 15899999999
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH----HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL----QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~----~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
++..++........+ +++.|+++...|++. ...++..|+ +++.+|+++++ .+|+++|+++++++
T Consensus 106 al~~i~~~~~~~~~~-------~gd~vl~~~~~~~s~~~~~~~~a~~~g~---~v~~v~~~~~~--~~~~~~l~~~i~~~ 173 (424)
T PLN02855 106 AINLVAYTWGLANLK-------PGDEVILSVAEHHSNIVPWQLVAQKTGA---VLKFVGLTPDE--VLDVEQLKELLSEK 173 (424)
T ss_pred HHHHHHHHhhhhcCC-------CcCEEEECCCccHHHHHHHHHHHHHcCC---EEEEEecCCCC--CcCHHHHHHHhccC
Confidence 977665432100001 567888999999874 345667788 99999997653 79999999998653
Q ss_pred HhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC
Q 041829 228 LTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF 307 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~ 307 (486)
+.+|++++++|+||.+.|+++|+++|+++|++++||++|+.+....+ .. .. ++|.+++++||+ ++|.
T Consensus 174 ------t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~-~~----~~-~~d~~~~s~~K~-~gp~ 240 (424)
T PLN02855 174 ------TKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVD-VQ----TL-GADFLVASSHKM-CGPT 240 (424)
T ss_pred ------ceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCC-ch----hc-CCCEEEeecccc-cCCC
Confidence 45899999999999999999999999999999999999975543322 11 11 589999999995 5688
Q ss_pred cceEEEEeCchHHHHHhcCCcccccccccccC---CccCCC--CCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHH
Q 041829 308 DCSALWVKDRNTLIQSLSTNPEFLKNKASQAN---MVVDYK--DWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHI 380 (486)
Q Consensus 308 ~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~---~~~~~~--~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~ 380 (486)
|+|++++++.. +.+ + .+++........ ....+. ...++.|.+ ....++..+++.+...|++++.++..
T Consensus 241 G~G~l~~~~~~-~~~-~---~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~ 315 (424)
T PLN02855 241 GIGFLWGKSDL-LES-M---PPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHEYEV 315 (424)
T ss_pred ccEEEEEchhh-hhc-C---CCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 99999998642 221 1 222211100000 000000 001222222 22356677777776778999999999
Q ss_pred HHHHHHHHHHhcCCCeEEecCC------CceEEEEEecCCCCCcccchHHHHHHHHHHHcc-CcEEEEeeeE--------
Q 041829 381 QLAKHFEGLVAQDLRFEVVTPR------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST-GKIFISHTVL-------- 445 (486)
Q Consensus 381 ~~a~~l~~~l~~~~~~~~~~~~------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~-------- 445 (486)
++++++++.|+++++++++.+. ..++++|.+.... ..++.+.|.++ | +.+.....
T Consensus 316 ~l~~~l~~~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~---------~~~v~~~L~~~~g-I~v~~g~~c~~~~~~~ 385 (424)
T PLN02855 316 ELGTYLYEKLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH---------PTDLSTFLDQQHG-VAIRSGHHCAQPLHRY 385 (424)
T ss_pred HHHHHHHHHHhcCCCEEEeCCCcccccCcccEEEEEECCcC---------HHHHHHHhcccCC-EEEechhhhhHHHHHH
Confidence 9999999999999999998642 2468888875311 14577777766 5 55543221
Q ss_pred -CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 446 -SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 446 -~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.-..++|+|+ ++++|++||++++++|+++...+.
T Consensus 386 ~g~~~~iRiS~-~~ynt~~di~~l~~~l~~~~~~~~ 420 (424)
T PLN02855 386 LGVNASARASL-YFYNTKEEVDAFIHALKDTIAFFS 420 (424)
T ss_pred hCCCCeEEEEe-ccCCCHHHHHHHHHHHHHHHHHHH
Confidence 1125799999 999999999999999999887653
No 34
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.96 E-value=1.5e-27 Score=237.32 Aligned_cols=341 Identities=14% Similarity=0.061 Sum_probs=236.0
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAA 160 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 160 (486)
.|.++++..+..+.+.+...+. ...++...++.+++.+++++++|.+.. ...++++|||+++..++.+.
T Consensus 2 ~~~~~~~~~~~~v~~a~~~~~~-----~~~~~~~~~~~~~~~~~la~~~g~~~~------~~~~~~~~~t~al~~~~~~~ 70 (356)
T cd06451 2 LLIPGPSNVPPRVLKAMNRPML-----GHRSPEFLALMDEILEGLRYVFQTENG------LTFLLSGSGTGAMEAALSNL 70 (356)
T ss_pred cccCCCcCCCHHHHHHhCCCcc-----CCCCHHHHHHHHHHHHHHHHHhcCCCC------CEEEEecCcHHHHHHHHHHh
Confidence 3556666666777776654321 124666778888899999999999543 13678999999988777654
Q ss_pred HHHHHHHhCccCCCCeEEEecCCCchh--HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEE
Q 041829 161 RDKALKRVGKNSLEKLVVYASDQTHSA--LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLC 238 (486)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv 238 (486)
.. +++.|+++...|++ +...++..|+ +++.+|++++ +.+|++++++++++. +|.+|+
T Consensus 71 ~~-----------~g~~vl~~~~~~~~~~~~~~~~~~g~---~~~~v~~~~~--~~~~~~~l~~~i~~~-----~~~~v~ 129 (356)
T cd06451 71 LE-----------PGDKVLVGVNGVFGDRWADMAERYGA---DVDVVEKPWG--EAVSPEEIAEALEQH-----DIKAVT 129 (356)
T ss_pred CC-----------CCCEEEEecCCchhHHHHHHHHHhCC---CeEEeecCCC--CCCCHHHHHHHHhcc-----CCCEEE
Confidence 32 56678888778887 4567888899 9999998864 589999999999751 245788
Q ss_pred EecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCch
Q 041829 239 ATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRN 318 (486)
Q Consensus 239 ~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~ 318 (486)
++.++|++|.+.|+++|.++|+++|+++++|++|+.+....+- . -.++|.+++++|||++.|.|+|+++++++
T Consensus 130 i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~-~-----~~~~d~~~~s~~K~l~~p~g~G~l~~~~~- 202 (356)
T cd06451 130 LTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRM-D-----EWGVDVAYTGSQKALGAPPGLGPIAFSER- 202 (356)
T ss_pred EeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccc-c-----ccCccEEEecCchhccCCCCcceeEECHH-
Confidence 8899999999999999999999999999999998644322111 1 11689999999999999999999998764
Q ss_pred HHHHHhc--C-CcccccccccccCCccCCCCCc-cCCC-CCC-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 319 TLIQSLS--T-NPEFLKNKASQANMVVDYKDWQ-IPLG-RRF-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 319 ~~~~~~~--~-~~~yl~~~~~~~~~~~~~~~~~-~~~s-r~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
.+..... . ...|....... .+.... ...+ ... ...++.++++.+...+++++.++..++++++.+.|++
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~t~~~~~~~a~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~~ 277 (356)
T cd06451 203 ALERIKKKTKPKGFYFDLLLLL-----KYWGEGYSYPHTPPVNLLYALREALDLILEEGLENRWARHRRLAKALREGLEA 277 (356)
T ss_pred HHHHHHhcCCCCceeecHHHHH-----hhhcccCCCCCCChHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333221 1 11121110000 000000 1111 111 1245667777777788999999999999999999998
Q ss_pred CCCeEEecCCC--ceEE-EEEecCCCCCcccchHHHHHHHHHHHcc-CcEEEEee-eECCEeEEEEEecCCCCCHHHHHH
Q 041829 393 DLRFEVVTPRI--FSLV-CFRLLPPHNDEDHGNKLNHKLLDDINST-GKIFISHT-VLSGKYILRFAVGAPLTEWRHVNA 467 (486)
Q Consensus 393 ~~~~~~~~~~~--~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~~~~~~lRi~~~~~~~t~~di~~ 467 (486)
. +++++.++. .+.+ ++++.+ + .+ ..++.+.|.++ | +.+.+. ......++|+++ ++++|++||++
T Consensus 278 ~-g~~~~~~~~~~~~~~~~~~~~~-~-----~~--~~~~~~~L~~~~g-I~~~~g~~~~~~~~iRis~-~~~~~~e~v~~ 346 (356)
T cd06451 278 L-GLKLLAKPELRSPTVTAVLVPE-G-----VD--GDEVVRRLMKRYN-IEIAGGLGPTAGKVFRIGH-MGEATREDVLG 346 (356)
T ss_pred c-CCeeccCcccCCCceEEEECCC-C-----CC--HHHHHHHHHHhCC-EEEecccccccCCEEEEec-CCCCCHHHHHH
Confidence 7 898875432 3444 344432 1 11 24677788777 6 444433 222235999999 88899999999
Q ss_pred HHHHHHHHH
Q 041829 468 AWEVMQDKA 476 (486)
Q Consensus 468 ~~~~l~~~~ 476 (486)
++++|++++
T Consensus 347 ~~~~l~~~~ 355 (356)
T cd06451 347 VLSALEEAL 355 (356)
T ss_pred HHHHHHHHh
Confidence 999998864
No 35
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.96 E-value=6e-27 Score=251.36 Aligned_cols=383 Identities=13% Similarity=0.008 Sum_probs=255.8
Q ss_pred CCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcC--cCcc---ccccChhhHHHHHHHHHHH
Q 041829 51 ESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLN--IVGF---SWITSPAATELEMIVLDWL 125 (486)
Q Consensus 51 ~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n--~~~~---~~~~~~~~~~le~~~~~~l 125 (486)
.++.++++ .+..+-.++..-.++-.-+| .+..-.-+.+.+...+ +. ...+ .-++..+..++-.++.+|+
T Consensus 504 ~se~~~~r---~~~~l~~~~~~~~~~~~plg--sctmk~n~~~~~~~~~-~~~~~~~hp~~p~~~~~g~~~~~~~~r~~l 577 (993)
T PLN02414 504 HSEHELLR---YLHRLQNKDLSLVHSMIPLG--SCTMKLNATTEMMPVT-WPEFANIHPFAPVDQAQGYQEMFEDLGDLL 577 (993)
T ss_pred cCHHHHHH---HHHHHhhcccccccCCccCc--ccccccCchhhhhhhc-CcchhhcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 68889999 66655545543322222222 1111111222222221 21 1112 2235567888899999999
Q ss_pred HHHcCCCCCCcCCCCCCeEEcCchh----HHHHHHHHHHHHHHHHHhCccCC-CCeEEEecCCCchhHHHHHHHhCCCCC
Q 041829 126 AKLLKLPEDFLSSGQGGGVIQGTAS----EAVLVVLLAARDKALKRVGKNSL-EKLVVYASDQTHSALQKACQIGGIHPQ 200 (486)
Q Consensus 126 a~l~g~~~~~~~~~~~~~~~t~ggt----~a~~~al~~a~~~~~~~~~~~~~-~~~~v~~s~~~H~s~~~a~~~~g~g~~ 200 (486)
++++|++. .+|+.++| +++++++.+..+. .|. .+.+|+++..+|.++...+...|+
T Consensus 578 a~i~g~~~---------v~f~pnaga~ge~a~~~vi~~~~~~-------~Gd~~r~~vli~~~aH~sn~a~a~~~G~--- 638 (993)
T PLN02414 578 CEITGFDS---------FSLQPNAGAAGEYAGLMVIRAYHLS-------RGDHHRNVCIIPVSAHGTNPASAAMCGM--- 638 (993)
T ss_pred HHHhCCCe---------EEEcCCCcHHHHHHHHHHHHHHHhc-------cCCCCCCEEEeCCCcCccCHHHHHHCCC---
Confidence 99999943 89999888 7777776655321 111 345899999999999999999999
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICP 280 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~ 280 (486)
+++.||++++ +.+|+++|++++++.+. ...+|++++++|.+|.++|+++|+++||++|+.++||+|+........
T Consensus 639 ~vv~v~~d~~--G~vDle~L~~~i~~~~~---~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~ 713 (993)
T PLN02414 639 KIVVVGTDAK--GNINIEELRKAAEAHKD---NLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLT 713 (993)
T ss_pred EEEEeccCCC--CCcCHHHHHHHHhccCC---CeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcC
Confidence 9999999864 59999999999985321 246899999999999999999999999999999999999976553222
Q ss_pred cchhcccCCcCCCceeeecccccCCCCc-----ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-
Q 041829 281 EYRQYIDGVEEADSFNMNAHKWFLTNFD-----CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR- 354 (486)
Q Consensus 281 ~~~~~~~~~~~aDs~~~~~hK~l~~p~~-----~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~- 354 (486)
.... -++|+++++.||+++.|.| +|++.++.. +. ..-+++...... +.......+..++++
T Consensus 714 ~p~~-----~GaD~~~~s~HK~f~~P~G~GGPg~G~l~~~~~--L~---p~lPg~~v~~~~---~~~~r~~~s~iGt~~~ 780 (993)
T PLN02414 714 SPGF-----IGADVCHLNLHKTFCIPHGGGGPGMGPIGVKKH--LA---PFLPSHPVVPTG---GIPRPEKTQPLGTISA 780 (993)
T ss_pred Cccc-----cCCCEEEecCCccCCcCcccCCCCeeeEEEchh--hc---ccCCCCccccCC---CcccccCCCCcCCccc
Confidence 1111 1899999999999987765 999988862 22 122222211100 000000001123322
Q ss_pred ------CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEEEEecCCCCCcccchHHHH
Q 041829 355 ------FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 355 ------~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
..++.+|..++.+|.+|+++..+++..+|+|++++|++..++....+ +.++.+.+.+.+... .......
T Consensus 781 a~~g~al~l~~A~~yi~~lG~~Gl~~~a~~a~~nAnYl~~rL~~~~~~~~~~~~~~~~hEfv~~~~~l~~---~~g~~~~ 857 (993)
T PLN02414 781 APWGSALILPISYTYIAMMGSEGLTDASKIAILNANYMAKRLEGHYPVLFRGKNGTCAHEFIIDLRPFKN---TAGIEPE 857 (993)
T ss_pred hhhhhHHHHHHHHHHHHHHCHhHHHHHHHHHHHHHHHHHHHHHhhCCccccCCCCCeeeeEEEecccccc---ccCCCHH
Confidence 12357789999999999999999999999999999988544443333 344555555442110 0001125
Q ss_pred HHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 427 KLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 427 ~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+.++|.+.|..... ..+...+.+|++. +.+.+++|||+++++|..+.+++.+
T Consensus 858 di~krL~d~Gihapt-~~~pv~~~lmiep-TE~~skeelDrf~~al~~i~~e~~~ 910 (993)
T PLN02414 858 DVAKRLMDYGFHAPT-MSWPVPGTLMIEP-TESESKAELDRFCDALISIREEIAD 910 (993)
T ss_pred HHHHHHHHcCcEEee-eccccCCEEEEEe-eeeCCHHHHHHHHHHHHHHHHHHHH
Confidence 577888877743222 2234466899999 9999999999999999999888765
No 36
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.96 E-value=1.3e-27 Score=238.83 Aligned_cols=317 Identities=20% Similarity=0.184 Sum_probs=227.1
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS 186 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (486)
.+..+....++-+++.+.+++++|.+++ ...+|++|+|+++..++...+... + ++..|+++...|+
T Consensus 34 ~~~~~~~~~~~~~~~r~~la~~lg~~~~------~~v~~~~~~t~a~~~~~~~l~~~~-~-------~g~~vl~~~~~~~ 99 (371)
T PF00266_consen 34 VSHRSREFAEILEEAREALAKLLGAPPD------EEVVFTSNGTEALNAVASSLLNPL-K-------PGDEVLVTSNEHP 99 (371)
T ss_dssp SSTTSHHHHHHHHHHHHHHHHHHTSSTT------EEEEEESSHHHHHHHHHHHHHHHG-T-------TTCEEEEEESSHH
T ss_pred ccchhhhhhHHHHHHHHHHHHhcCCccc------cccccccccchhhhhhhhcccccc-c-------ccccccccccccc
Confidence 4445666788888899999999999882 158899999998877776664321 1 5678889999999
Q ss_pred hHH----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 187 ALQ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 187 s~~----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
+.. ..++..|+ +++.+|.+.++ .+|+++++++|.++ +.+|++++.+|.+|.+.|+++|+++||++
T Consensus 100 s~~~~~~~~~~~~g~---~v~~i~~~~~~--~~~~~~~~~~l~~~------~~lv~~~~~~~~tG~~~pi~~I~~~~~~~ 168 (371)
T PF00266_consen 100 SNRYPWEEIAKRKGA---EVRVIPADPGG--SLDLEDLEEALNPD------TRLVSISHVENSTGVRNPIEEIAKLAHEY 168 (371)
T ss_dssp HHHHHHHHHHHHTTE---EEEEEEEGTTS--SCSHHHHHHHHHTT------ESEEEEESBETTTTBBSSHHHHHHHHHHT
T ss_pred ccccccccccccchh---hhccccccccc--hhhhhhhhhhhccc------cceEEeecccccccEEeeeceehhhhhcc
Confidence 877 34446788 99999998654 89999999999654 45899999999999999999999999999
Q ss_pred CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccc--ccccccccCC
Q 041829 263 GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEF--LKNKASQANM 340 (486)
Q Consensus 263 g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~y--l~~~~~~~~~ 340 (486)
|++++||++++.+....+ ... + ++|.+++++|| +++|.|+|+++++++. +.+......++ ........ .
T Consensus 169 ~~~~~vD~~~~~g~~~id-~~~----~-~~D~~~~s~~K-l~gp~G~g~l~v~~~~-~~~~~p~~~~~~~~~~~~~~~-~ 239 (371)
T PF00266_consen 169 GALLVVDAAQSAGCVPID-LDE----L-GADFLVFSSHK-LGGPPGLGFLYVRPEA-IERLRPAKPGGGYLDFPSLQE-Y 239 (371)
T ss_dssp TSEEEEE-TTTTTTSS---TTT----T-TESEEEEESTS-TTSSSTEEEEEEEHHH-HHHHHTSSSSSSTTTHHHHHH-H
T ss_pred CCceeEechhcccccccc-ccc----c-ccceeeecccc-cCCCCchhhheehhhh-hhccccccccccccccccchh-c
Confidence 999999999988776544 221 1 79999999999 8889999999999854 33321111111 11100000 0
Q ss_pred ccCCCCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCceEEEEEecCC
Q 041829 341 VVDYKDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP----RIFSLVCFRLLPP 414 (486)
Q Consensus 341 ~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~----~~~~~v~f~~~~~ 414 (486)
......+.++.|.. ...+++..+++.+...|++++.++..++++++.+.|+++++++++.+ ...++++|.+...
T Consensus 240 ~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 319 (371)
T PF00266_consen 240 GLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRERIRELAEYLREALEELPGIEVLGPDDEPRRPSIVSFNLPGS 319 (371)
T ss_dssp CHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTEEESSSSCGGBGTTEEEEEETTS
T ss_pred ccccccccccccceeeehhhhHHHHHhhhhccccccchhhhhhHHHHHHhhhhcCCceeEeeecccccccceEEEeecCC
Confidence 00011122233322 12245667777777789999999999999999999999999998652 2456899998542
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEEeeeEC---------CEeEEEEEecCCCCCHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFISHTVLS---------GKYILRFAVGAPLTEWRHVNAA 468 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---------~~~~lRi~~~~~~~t~~di~~~ 468 (486)
. . ..+.+.|.++| +.++.+... -.+++|+|+ ++++|++|||++
T Consensus 320 ~-------~--~~~~~~L~~~~-I~~~~G~~~~~~~~~~~~~~~~iRvS~-~~~nt~~dv~~l 371 (371)
T PF00266_consen 320 D-------A--DDVVKYLEERG-IAVSTGSACAGPSLDILGMGGVIRVSL-HYYNTEEDVDRL 371 (371)
T ss_dssp S-------H--HHHHHHHHHHT-EEEEESTTTCHHHHHHHHTTTEEEEE--GTTSSHHHHHHH
T ss_pred C-------H--HHHHHHHhhcC-EEEeccCcccHHHHHHhCCCCEEEEec-cCCCCHHHHhhC
Confidence 2 1 56777777776 555542211 126899998 999999999986
No 37
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.96 E-value=4.4e-27 Score=237.57 Aligned_cols=369 Identities=15% Similarity=0.079 Sum_probs=232.6
Q ss_pred HHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCcccccc-----ChhhHHHHHHHHHHHHHHc
Q 041829 55 NVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWIT-----SPAATELEMIVLDWLAKLL 129 (486)
Q Consensus 55 ~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~-----~~~~~~le~~~~~~la~l~ 129 (486)
+|++ ++...-.++...-.+-..++-...+-.+|..+.+..... . ....|.. ..+..++.+++.+++++++
T Consensus 3 ~~~~---~~~~~~~~~~~~~~~~~~l~~g~~~~~~p~~~~~~~~~~-~-~~~~~~~~~~~~~~g~~~~~~~~~~~la~~~ 77 (398)
T cd00613 3 EVLR---HLKRLASKNKALDQSMSFLGSGTYKHNPPAVIKRNILEN-E-FYTAYTPYQPEISQGRLQALFELQTMLCELT 77 (398)
T ss_pred HHHH---HHHHHHhcCcCcccCcccccccccCCcCcHHHHHHhccc-c-CcccCCCCChhhhhhHHHHHHHHHHHHHHHH
Confidence 6777 665532233222112234443333344455555544433 1 1112222 5677899999999999999
Q ss_pred CCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC----CCCCCeEEE
Q 041829 130 KLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG----IHPQNFRVL 205 (486)
Q Consensus 130 g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g----~g~~~v~~v 205 (486)
|.+.+ ..+++.+|+.+...++.+++... .++++|++++..|.+...++..+| . +++.+
T Consensus 78 g~~~~-------~v~~~~~g~~~~~~~~~~~~~~~--------~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~---~~~~v 139 (398)
T cd00613 78 GMDVA-------NASLQDEATAAAEAAGLAAIRAY--------HKRNKVLVPDSAHPTNPAVARTRGEPLGI---EVVEV 139 (398)
T ss_pred CCCcc-------ceeccCchHHHHHHHHHHHHhcc--------cCCCEEEEcCccCcchHHHHHHhcccCCc---EEEEe
Confidence 98753 35666766655555554444320 037789999999999999988887 7 88999
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCCh-HHHHHHHHHhCCEEEeeccccchhccCccchh
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPL-LALGNIAKSNGMWFHVDAAYAGSACICPEYRQ 284 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l-~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~ 284 (486)
|++++ +.+|+++|++++.++ +.+|+++.++ ++|.+.|+ ++|+++|+++|+|+|+|++++.+.......
T Consensus 140 ~~~~~--~~~d~~~l~~~i~~~------t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~-- 208 (398)
T cd00613 140 PSDEG--GTVDLEALKEEVSEE------VAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPG-- 208 (398)
T ss_pred ccCCC--CCcCHHHHHHhcCCC------eEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChH--
Confidence 98653 489999999988543 3578888875 78999885 999999999999999999987544332211
Q ss_pred cccCCcCCCceeeecccccCCCC-----cceEEEEeCchHHHHHhcCCccccccccc-ccCCccCCC----CCccCCCC-
Q 041829 285 YIDGVEEADSFNMNAHKWFLTNF-----DCSALWVKDRNTLIQSLSTNPEFLKNKAS-QANMVVDYK----DWQIPLGR- 353 (486)
Q Consensus 285 ~~~~~~~aDs~~~~~hK~l~~p~-----~~g~l~~r~~~~~~~~~~~~~~yl~~~~~-~~~~~~~~~----~~~~~~sr- 353 (486)
..++|++++++|||+ .|. ++|++++++. .. +.+.....+...... ......++. ....+.+.
T Consensus 209 ----~~~~d~~~~s~~K~~-~p~g~Ggp~~g~l~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~e~~~~ 281 (398)
T cd00613 209 ----EYGADIVVGNLQKTG-VPHGGGGPGAGFFAVKKE-LV-RFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS 281 (398)
T ss_pred ----HcCCCEEEeeccccC-CCCCCCCCceeEEEEhhh-hH-hhCCCCeeccccccCCCcceEEecccchhhcccccccc
Confidence 126899999999999 664 4667777643 22 222111001100000 000000000 00001111
Q ss_pred ------CCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHH
Q 041829 354 ------RFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHK 427 (486)
Q Consensus 354 ------~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 427 (486)
...+..+|+++..++.++++++.++..++++++++.|+++++......+....++|++... ......+
T Consensus 282 ~~~~~~~~~~~~a~~~l~~~~~~g~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~v~~~~~~~------~~~~~~~ 355 (398)
T cd00613 282 NICTGQALLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPL------YGIRAED 355 (398)
T ss_pred cceecHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhcCCcccCCCCeeEEEEEEcCCc------chHHHHH
Confidence 1223466777888899999999999999999999999998655432234455667776421 0123456
Q ss_pred HHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 428 LLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 428 l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+.++|.++|.. +......+..++|+++ +.++|++|||+++++|
T Consensus 356 ~~~~L~~~gi~-~~~~~~~~~~~lRis~-~~~~t~edid~~~~~L 398 (398)
T cd00613 356 LAKALIDGGFH-APTMYLPVDGTLMIEP-TETETKEELDALLEAL 398 (398)
T ss_pred HHHhhhhcCcc-ccccccCCCCeEEEEc-CCCCCHHHHHHHHHhC
Confidence 78888888743 3322223446899999 9999999999999864
No 38
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.96 E-value=1.9e-26 Score=231.21 Aligned_cols=314 Identities=15% Similarity=0.145 Sum_probs=213.7
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCC
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGI 197 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~ 197 (486)
.+++.+.+++++|.+. .++++|+|++|..++.+... +++.|+++..+|++...+++..|+
T Consensus 65 ~~~l~~~lA~~~g~~~---------~~~~~g~t~a~~~al~~l~~-----------~gd~Vlv~~~~h~s~~~~~~~~G~ 124 (387)
T PRK09331 65 IADFHEDLAEFLGMDE---------ARVTHGAREGKFAVMHSLCK-----------KGDYVVLDGLAHYTSYVAAERAGL 124 (387)
T ss_pred HHHHHHHHHHHhCCCc---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHHHHHHHcCC
Confidence 3444444999999864 67899999999888876533 677899999999999999999999
Q ss_pred CCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh-CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchh
Q 041829 198 HPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT-IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSA 276 (486)
Q Consensus 198 g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~-~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~ 276 (486)
+++.+|.+.+.++.+|+++|++++++... .+..+.+|+++++++++|.+.|+++|+++|+++|+++|||+||+.+.
T Consensus 125 ---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~ 201 (387)
T PRK09331 125 ---NVREVPKTGYPEYKITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGR 201 (387)
T ss_pred ---EEEEEeCccCcCCCcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCC
Confidence 99999983222468999999999976422 23357789999999999999999999999999999999999998765
Q ss_pred ccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-C
Q 041829 277 CICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-F 355 (486)
Q Consensus 277 ~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~ 355 (486)
+..+-. . . ++|.+++++||++++|.+.|++++++ +.+........+|..... . .+.++.+ .
T Consensus 202 ~~~~~~-~----~-g~D~~~~s~~K~l~~~~~~G~l~~~~-~~i~~~~~~~~~~~~~~~-------~----~~~~~~~~~ 263 (387)
T PRK09331 202 MPVDGK-K----L-GADFIVGSGHKSMAASAPSGVLATTE-EYADKVFRTSRKFGVKEV-------E----LLGCTLRGA 263 (387)
T ss_pred cCCCHH-H----c-CCCEEEeeCcccccCCCCEEEEEECH-HHHhhcccccCCCcccce-------e----eeceecCch
Confidence 433211 1 1 68999999999999999999988865 334333232323321110 0 0111111 2
Q ss_pred CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 356 RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 356 ~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
.+..+++++..+- +.. +.+++..++++++++.|++++|++++.+ ...+++.+..................+.+.|.
T Consensus 264 ~~~~~~aal~~~~-~~~-~~~~~~~~~~~~l~~~L~~l~g~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~L~ 341 (387)
T PRK09331 264 PLVTLMASFPHVV-ERV-KRWDEEVKKARWFVDELEKIEGFKQLGEKPRNHDLMKFETPSFDEIAKKHKRRGFFLYEELK 341 (387)
T ss_pred HHHHHHHHHHHHH-HHH-HHHHHHHHHHHHHHHHHhcCCCEEEeccCcCcCCeEEEeCCchhHHhhhccccchhHHHHHH
Confidence 2344445554431 222 3556678899999999999999999842 33456666543100000000111245778888
Q ss_pred ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 434 STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 434 ~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.|...+. .....++|+..+. .|++|+++++++|+++.+++
T Consensus 342 ~~gI~~~~---~~~~~i~ri~~~g--~t~~di~~l~~aL~~i~~~~ 382 (387)
T PRK09331 342 KRGIHGIK---PGATKEFKLSTYG--LTWEQVEYVADAFKEIAEKY 382 (387)
T ss_pred HcCceEEc---cCCceEEEEEecc--CCHHHHHHHHHHHHHHHHhc
Confidence 88753222 2223467776633 69999999999999887653
No 39
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.96 E-value=7.6e-27 Score=234.33 Aligned_cols=309 Identities=17% Similarity=0.191 Sum_probs=211.6
Q ss_pred hHHHHHHHHHHHHHHcCC-CCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKL-PEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~-~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...+++. +..+.+.+|. +++ +.++|+|+|+++..++.+.......+ .++..|+++...|+++....
T Consensus 41 ~~~l~~a-~~~~~~~~~~~~~~-------~i~~t~g~teal~~~~~~~~~~~~~~-----~~~~~vi~~~~e~ps~~~~~ 107 (382)
T TIGR03403 41 HPAIAEA-LDKLYKGINARDLD-------DIIITSCATESNNWVLKGVYFDEILK-----GGKNHIITTEVEHPAVRATC 107 (382)
T ss_pred HHHHHHH-HHHHHHHcCcCCCC-------eEEEeCCHHHHHHHHHHHHHHhhccc-----CCCCEEEEcCCccHHHHHHH
Confidence 3444444 4445556675 333 58999999999888776542110000 03457888999999877664
Q ss_pred H---HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 193 Q---IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 193 ~---~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
. ..|+ +++.||++++ +.+|+++|++++++. +.+|++++++|+||.+.|+++|.++|+++|+++|||
T Consensus 108 ~~~~~~G~---~v~~v~~~~~--g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD 176 (382)
T TIGR03403 108 AFLESLGV---EVTYLPINEQ--GTITAEQVREAITEK------TALVSVMWANNETGMIFPIKEIGEICKERGVLFHTD 176 (382)
T ss_pred HHHHHCCC---EEEEEecCCC--CCCCHHHHHHhcccC------CeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEe
Confidence 4 4677 9999999854 589999999998654 347889999999999999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
++++.+....+.. -.++|++++++||| ++|.|+|++++|+... .. +.+...... ....
T Consensus 177 ~a~~~g~~~~~~~------~~~~D~~~~s~~K~-~gp~G~g~l~vr~~~~------~~-p~~~g~~~~----~~~~---- 234 (382)
T TIGR03403 177 AVQAIGKIPVDVQ------KAGVDFLSFSAHKF-HGPKGVGGLYIRKGVE------LT-PLFHGGEHM----GGRR---- 234 (382)
T ss_pred chhhcCCCccCcc------ccCCCEEEEcchhh-CCCCceEEEEECCCCC------CC-CcccCCCCC----CCcc----
Confidence 9988654433211 12699999999998 5688999999987531 11 122111000 0000
Q ss_pred CCCCCCCc-HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--C-ceEEEEEecCCCCCcccchHHH
Q 041829 350 PLGRRFRS-LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR--I-FSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 350 ~~sr~~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~--~-~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
.++....+ +++..+++.. .+.++...++..++++++.+.|+++|+++++.++ . .+++.|.+... + .
T Consensus 235 ~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~ 304 (382)
T TIGR03403 235 SGTLNVPYIVAMGEAMRLA-NEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIKGV-------E--G 304 (382)
T ss_pred cCCcChHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHHhcCCCEEEECCCCCCcCCEEEEEeCCC-------C--H
Confidence 11111222 2455555543 3457777889999999999999999999998643 2 34667776431 1 1
Q ss_pred HHHHHHHHccCcEEEEeee---------------EC-----CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTV---------------LS-----GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~---------------~~-----~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
..+...|.++| +.++... .. ..+.+|+|+ ++++|++|||+++++|+++.+++.
T Consensus 305 ~~~~~~L~~~g-I~v~~g~~c~~~~~~~~~v~~~~g~~~~~~~~~iR~s~-~~~~t~~did~~~~~l~~~~~~~~ 377 (382)
T TIGR03403 305 EAMLWDLNKAG-IAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSL-SRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred HHHHHhhccCC-EEEEchhccCCCCCCcCHHHHHcCCChHHhCeeEEEEC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 34556666666 5554311 00 125799999 899999999999999999887754
No 40
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.96 E-value=1.1e-26 Score=233.83 Aligned_cols=350 Identities=12% Similarity=0.035 Sum_probs=240.5
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAA 160 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 160 (486)
-+.|++...+..+.+.+...+.. ..++.+.++.+++.+++++++|.+.. ...+++++||.++..++...
T Consensus 12 l~~pGP~~~~~~V~~a~~~~~~~-----~~~~~~~~~~~~~~~~l~~~~g~~~~------~~vi~~~~gt~a~~~a~~~~ 80 (401)
T PLN02409 12 LFVPGPVNIPERVLRAMNRPNED-----HRSPAFPALTKELLEDVKYIFKTKSG------TPFIFPTTGTGAWESALTNT 80 (401)
T ss_pred eccCCCCCCCHHHHHHhcCCCCC-----CCCHHHHHHHHHHHHHHHHHhCCCCC------CEEEEeCCcHHHHHHHHHhc
Confidence 35577766666666665443322 23678889999999999999998753 14788889998877666543
Q ss_pred HHHHHHHhCccCCCCeEEEecCCCchhH--HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEE
Q 041829 161 RDKALKRVGKNSLEKLVVYASDQTHSAL--QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLC 238 (486)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv 238 (486)
.+ +++.|+++...|++. ...++..|+ +++.++.+.++ .+|+++|++++++++. .++.+|+
T Consensus 81 ~~-----------~Gd~Vlv~~~~~~~~~~~~~~~~~g~---~v~~v~~~~~~--~~~~~~l~~~l~~~~~--~~~k~v~ 142 (401)
T PLN02409 81 LS-----------PGDKVVSFRIGQFSLLWIDQMQRLNF---DVDVVESPWGQ--GADLDILKSKLRQDTN--HKIKAVC 142 (401)
T ss_pred CC-----------CCCEEEEeCCCchhHHHHHHHHHcCC---ceEEEECCCCC--CCCHHHHHHHHhhCcC--CCccEEE
Confidence 22 667788888888765 467888899 99999988643 6899999999986321 1256899
Q ss_pred EecCCccccccCChHHHHHH--HHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeC
Q 041829 239 ATVGTTSSTAVDPLLALGNI--AKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKD 316 (486)
Q Consensus 239 ~~~~~t~tG~id~l~~I~~i--a~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~ 316 (486)
+++++|+||.+.|+++|+++ |+++|++++||++++.+....+- .. + ++|.++.++|||+++|.|+|++++++
T Consensus 143 ~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~-~~----~-~~D~~~~s~~K~l~~P~G~G~l~~~~ 216 (401)
T PLN02409 143 VVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRM-DE----W-GVDVALTGSQKALSLPTGLGIVCASP 216 (401)
T ss_pred EEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccc-cc----c-CccEEEEcCccccCcCCCcceeEECH
Confidence 99999999999999999999 99999999999998755443221 11 1 68999999999999999999999876
Q ss_pred chHHHHHhcCC--cccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC
Q 041829 317 RNTLIQSLSTN--PEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD 393 (486)
Q Consensus 317 ~~~~~~~~~~~--~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~ 393 (486)
+. +.+..... +.|+.-..... ......+. ..+.. ....++..+++.+..+|++++.+++.++++++++.|+++
T Consensus 217 ~~-~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~-~~Tp~~~~~~al~~al~~~~~~G~e~i~~~~~~l~~~l~~~L~~~ 292 (401)
T PLN02409 217 KA-LEASKTAKSPRVFFDWADYLK--FYKLGTYW-PYTPSIQLLYGLRAALDLIFEEGLENVIARHARLGEATRLAVEAW 292 (401)
T ss_pred HH-HHHHhcCCCCCeecCHHHHHH--HHhcCCCC-CCCccHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc
Confidence 53 33322211 12221000000 00000000 01111 112355566776667899999999999999999999987
Q ss_pred CCeEEecCC-C--c-eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC-CEeEEEEEecCCCCCHHHHHHH
Q 041829 394 LRFEVVTPR-I--F-SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS-GKYILRFAVGAPLTEWRHVNAA 468 (486)
Q Consensus 394 ~~~~~~~~~-~--~-~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~ 468 (486)
|++++.+. . . .+++|+++. + .+ ..++.+.+.++..+.+.++... ...++|++. +.+++++|+..+
T Consensus 293 -g~~~~~~~~~~~s~~v~~~~~p~-~-----~~--~~~l~~~l~~~~~i~i~~G~~~~~~~~~Rig~-~g~~~~~~~~~~ 362 (401)
T PLN02409 293 -GLKLCTKKPEWRSDTVTAVVVPE-G-----ID--SAEIVKNAWKKYNLSLGLGLNKVAGKVFRIGH-LGNVNELQLLGA 362 (401)
T ss_pred -CCeeccCChhhcccceEEEeCCC-C-----CC--HHHHHHHHHHhCCEEEEcCCCcccCCEEEEcC-CCCCCHHHHHHH
Confidence 89988642 1 3 355666542 1 11 1345566655544666655332 235899999 568899999999
Q ss_pred HHHHHHHHHHH
Q 041829 469 WEVMQDKASAL 479 (486)
Q Consensus 469 ~~~l~~~~~~l 479 (486)
+++|.+++.++
T Consensus 363 ~~~~~~~l~~~ 373 (401)
T PLN02409 363 LAGVEMVLKDV 373 (401)
T ss_pred HHHHHHHHHHc
Confidence 99999887653
No 41
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.96 E-value=2.8e-26 Score=241.38 Aligned_cols=392 Identities=13% Similarity=0.056 Sum_probs=259.2
Q ss_pred CCCCHHHHHhhHHHHHHhhcCCCCcCCCCccccc-----CCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHH
Q 041829 49 HPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAY-----YPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLD 123 (486)
Q Consensus 49 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~-----~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~ 123 (486)
++.++.++++ .+.++..+|..-.++..|+|- .+..-..|....+|.+. .+.. ..+.+.+.-++-.+...
T Consensus 477 ~~~SE~el~r---~~~~La~kn~~~~~~~~~LGsCTmK~n~~~~~~p~s~~eF~t~--hPyq-p~e~sQG~lq~i~elq~ 550 (954)
T PRK12566 477 AHHSETEMLR---YLKQLENKDLALNQSMIPLGSCTMKLNATSEMIPITWPEFAQL--HPFA-PREQAEGYRAMIDELEA 550 (954)
T ss_pred cCCCHHHHHH---HHHHHHhcCcCcccCcccCcccccCcCcHHhhhcccchhhhcC--CCCC-chhhhcCHHHHHHHHHH
Confidence 4679999999 888877777655556677774 33333344455666654 2222 22345555555555558
Q ss_pred HHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeE
Q 041829 124 WLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFR 203 (486)
Q Consensus 124 ~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~ 203 (486)
|+++++|++.. .+--++|+.+++.++++.|.....+ |.. .+.+|+++..+|.+....+...|+ +++
T Consensus 551 ~l~eLtGmd~~--------Sl~p~sGA~gE~A~Lmair~yh~~~-Ge~--~r~~vLIp~saHgtNpasa~~~Gi---eVv 616 (954)
T PRK12566 551 WLCAITGFDAI--------CMQPNSGAQGEYAGLLAIRRYHRSR-GQS--QRDICLIPSSAHGTNPASAQMAGM---RVV 616 (954)
T ss_pred HHHHHHCCCeE--------eecCCchHHHHHHHHHHHHHHHHhc-CCC--CCCEEEecccccccCHHHHHHCCC---EEE
Confidence 89999999873 3444478888888888876533221 211 467889999999887777888999 999
Q ss_pred EEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccch
Q 041829 204 VLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYR 283 (486)
Q Consensus 204 ~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~ 283 (486)
.||+|++ +.+|+++|++++++.. .+..+|+++++++..+..+|+++|+++||++|++++||+|+...........
T Consensus 617 ~Vp~D~~--G~iDle~L~a~I~~~~---~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg 691 (954)
T PRK12566 617 IVECDPD--GNVDLDDLKAKAAAAG---DRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPA 691 (954)
T ss_pred EeccCCC--CCcCHHHHHHHhhccC---CCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChh
Confidence 9999864 5999999999997321 2356788899888877778899999999999999999999974443333222
Q ss_pred hcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccccccccc-ccCCc-cCCCCCccCCCCC-CCcHHH
Q 041829 284 QYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKAS-QANMV-VDYKDWQIPLGRR-FRSLKL 360 (486)
Q Consensus 284 ~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~-~~~~~-~~~~~~~~~~sr~-~~~l~~ 360 (486)
. -++|++++++|||++.|.+.|..+++.-..... -.+|+..... +..+. ...+..+..+.-. ..++.+
T Consensus 692 ~-----~GADi~~~s~HKtf~~P~G~GGP~vG~iav~~~----L~pfLp~~P~~d~~G~~~r~ga~S~~~~gsa~~l~~A 762 (954)
T PRK12566 692 D-----IGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAH----LAPFVANHPVVPVEGPDPNNGAVSAAPWGSASILPIS 762 (954)
T ss_pred h-----cCCCEEEecCCcccCcCccCCCCccchhhhhhh----hhhhccCCCCcCCCCCCCCCCceeecccchHHHHHHH
Confidence 2 289999999999999999999888776221110 1123322110 00000 0000000001000 124688
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC----CCceEEEEEecCCCCCcccchHHHHHHHHHHHccC
Q 041829 361 WMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP----RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTG 436 (486)
Q Consensus 361 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g 436 (486)
|..++.+|.+ +.+....+..+|+|++++|++. +.+... +.++.+.+...+.... ......++.++|.+.|
T Consensus 763 ~~Yi~~lG~e-Lk~aa~~ailnAnYla~rL~~~--~~v~~~~~~~~~~hEfii~~~~l~~~---~g~~~~dvakRL~d~G 836 (954)
T PRK12566 763 WMYIAMMGPQ-LADASEVAILSANYLANQLGGA--FPVLYRGRNERVAHECILDLRPLKAQ---TGISEEDVAKRLMDYG 836 (954)
T ss_pred HHHHHHHCHH-HHHHHHHHHHHHHHHHHHhHhh--CCCCcCCCCCCeeeEEEEEccccccc---cCCCHHHHHHHHHHCC
Confidence 8999999999 8888888899999999999874 444322 2234444444321100 0011245777788777
Q ss_pred cEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 437 KIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 437 ~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
.. .....+.....+|++. +..++++|||+++++|+.+.+++.+-
T Consensus 837 ih-apt~~fPv~~~LmIep-TE~eskeEIDrf~eAL~~I~~e~~~v 880 (954)
T PRK12566 837 FH-APTMSFPVPGTLMVEP-TESESKAELDRFVEAMLSIRAEIGKV 880 (954)
T ss_pred cE-EeEEeeccCCEEEEEe-eeeCCHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2223344466899999 99999999999999999999887643
No 42
>PRK02948 cysteine desulfurase; Provisional
Probab=99.96 E-value=1.8e-26 Score=231.51 Aligned_cols=316 Identities=14% Similarity=0.150 Sum_probs=218.7
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
...+..+.....+.+++++.+++++|.+++ ..++++|+|+++..++.+......+ ++++|+++...
T Consensus 32 ~~~~~~~~~~~~~~~~~r~~la~~~g~~~~-------~i~~~~g~t~a~~~~~~~~~~~~~~-------~g~~vv~~~~~ 97 (381)
T PRK02948 32 SSLHDIGGTASSLLQVCRKTFAEMIGGEEQ-------GIYFTSGGTESNYLAIQSLLNALPQ-------NKKHIITTPME 97 (381)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCcHHHHHHHHHHHHHHhccC-------CCCEEEECCcc
Confidence 344445566677888899999999998764 5889999999998887765432101 46788889999
Q ss_pred chhHHHHH---HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 185 HSALQKAC---QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 185 H~s~~~a~---~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
|+|+.... +..|+ +++.+|++++ +.+|+++|++++++. +.+|++++++|+||.+.|+++|.++|++
T Consensus 98 h~s~~~~~~~~~~~g~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~ 166 (381)
T PRK02948 98 HASIHSYFQSLESQGY---TVTEIPVDKS--GLIRLVDLERAITPD------TVLASIQHANSEIGTIQPIAEIGALLKK 166 (381)
T ss_pred cHHHHHHHHHHHhCCC---EEEEEeeCCC--CCCCHHHHHHhcCCC------CEEEEEECCcCCcEeehhHHHHHHHHHH
Confidence 99877654 44577 9999998754 589999999988643 4589999999999999999999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMV 341 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~ 341 (486)
+|+++|||++++.+....+ +.. .++|++++++||++ +|.|+|+++++++..+. + ......
T Consensus 167 ~~~~vivD~~~~~g~~~~~-----~~~-~~~d~~~~s~~K~~-gp~G~G~l~~~~~~~~~------~-~~~~~~------ 226 (381)
T PRK02948 167 YNVLFHSDCVQTFGKLPID-----VFE-MGIDSLSVSAHKIY-GPKGVGAVYINPQVRWK------P-VFPGTT------ 226 (381)
T ss_pred cCCEEEEEChhhccccccC-----ccc-CCCCEEEecHHhcC-CCCcEEEEEEcCCCCCC------C-cccCCC------
Confidence 9999999998765433221 111 16899999999975 58899999987642110 0 000000
Q ss_pred cCCCCCccCCC-CC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCC---ceEEEEEecCC
Q 041829 342 VDYKDWQIPLG-RR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRI---FSLVCFRLLPP 414 (486)
Q Consensus 342 ~~~~~~~~~~s-r~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~---~~~v~f~~~~~ 414 (486)
....++.+ -. ....++..+++.. .+..++..++..++++++++.|+++ ++++.. ++. ..++.|.....
T Consensus 227 ---~~~~~~~~t~~~~~~~a~~~al~~~-~~~~~~~~~~~~~~~~~l~~~L~~~-~~~v~~~~~~~~~~~~i~~~~~~~~ 301 (381)
T PRK02948 227 ---HEKGFRPGTVNVPGIAAFLTAAENI-LKNMQEESLRFKELRSYFLEQIQTL-PLPIEVEGHSTSCLPHIIGVTIKGI 301 (381)
T ss_pred ---CCCCcCCCCccHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcC-CCCEEEeCCCccCcCCEEEEEeCCC
Confidence 00001111 11 1223444555543 2567888899999999999999998 555442 121 23566665421
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEEeee-----E---------------CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFISHTV-----L---------------SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-----~---------------~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
+ ..++...|.++| +.+.... + ....++|+++ ++++|++|+++++++|++
T Consensus 302 -------~--~~~~~~~l~~~g-I~v~~g~~c~~~~~~p~~~~~~~~~~~~~~~~~lRis~-~~~~t~~di~~l~~~l~~ 370 (381)
T PRK02948 302 -------E--GQYTMLECNRRG-IAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSF-GQQTTKDQIDTTIHALET 370 (381)
T ss_pred -------C--HHHHHHhcccCC-EEEEchHhcCCCCCCCCHHHHHcCCChHHhCceEEEEc-CCCCCHHHHHHHHHHHHH
Confidence 1 134555666666 5554321 1 1136899999 899999999999999999
Q ss_pred HHHHHHH
Q 041829 475 KASALLA 481 (486)
Q Consensus 475 ~~~~l~~ 481 (486)
+.+++.+
T Consensus 371 ~~~~~~~ 377 (381)
T PRK02948 371 IGNQFYR 377 (381)
T ss_pred HHHHHhc
Confidence 8876653
No 43
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.95 E-value=3.1e-25 Score=220.87 Aligned_cols=314 Identities=14% Similarity=0.144 Sum_probs=212.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|...++++. +++++|.+ ..++++|+|+++..++.+... +++.|+++..+|++..
T Consensus 42 ~~~~~~~l~~~----la~~~g~~---------~i~~~~g~t~al~~~l~~~~~-----------~gd~Vl~~~~~~~~~~ 97 (361)
T cd06452 42 EKPPIKDFHHD----LAEFLGMD---------EARVTPGAREGKFAVMHSLCE-----------KGDWVVVDGLAHYTSY 97 (361)
T ss_pred cCchHHHHHHH----HHHHcCCc---------eEEEeCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcchHHH
Confidence 34555566666 89999983 389999999998887765432 6778889999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC-CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI-GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~-g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
.+++..|+ +++.+|++.+++|.+|+++|++++++..+. +..+.+|++++++|++|.+.|+++|+++|+++|+++|+
T Consensus 98 ~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~viv 174 (361)
T cd06452 98 VAAERAGL---NVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLL 174 (361)
T ss_pred HHHHhcCC---EEEEEecCCCCCcccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEE
Confidence 99999999 999999987555799999999999764322 23467899999999999999999999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCc
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQ 348 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (486)
|+||+.+....+. .. . ++|.++.++||+++.|.++|+++.++ +.+.+......+|-.. ...
T Consensus 175 D~a~~~g~~~~~~-~~----~-~~d~~~~s~~K~l~~~~~~G~l~~~~-~~~~~l~~~~~~~~~~------------~~~ 235 (361)
T cd06452 175 NGAYTVGRMPVSG-KE----L-GADFIVGSGHKSMAASAPIGVLATTE-EWADIVFRTSQMFKIK------------EVE 235 (361)
T ss_pred ECCcccCCcCCCH-HH----c-CCCEEEecCCccccCCCCeEEEEECH-HHHHHHhccccccccc------------eee
Confidence 9999864432211 11 1 58999999999999888899888764 3343332222221100 001
Q ss_pred c-CCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEEEEEecCCCCCcccchHH
Q 041829 349 I-PLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLVCFRLLPPHNDEDHGNKL 424 (486)
Q Consensus 349 ~-~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~ 424 (486)
. ..+.+ .....++.++... .+.+ +..++..++++++++.|+++|+++++. +...+++.++..............
T Consensus 236 ~~~~~~~~~~~~~~~~al~~~-~~~~-~~~~~~~~~~~~l~~~L~~l~g~~v~~~~~~~~n~~~~~~~~~~~~~~~~~~~ 313 (361)
T cd06452 236 LLGCTLRGAPLVTLMASFPHV-KERV-KRWDEEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRR 313 (361)
T ss_pred eeccccCchHHHHHHHHHHHH-HHHH-HHHHHHHHHHHHHHHHHhcCCCeEEECCCCCCCceEEEEcCCcchhhhhcccc
Confidence 0 11111 2233445555433 2333 345555677899999999999999874 345567776653100000000011
Q ss_pred HHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 425 NHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 425 ~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
..++.+.|.++|.. +. ......++|++++. .+++|++.++++|+++.
T Consensus 314 ~~~~~~~L~~~gI~-~~--~~~~~~~~ri~~~g--~~~e~~~~l~~al~~~~ 360 (361)
T cd06452 314 GYFLYSELKKRGIH-GI--KPGLTRYFKLSTYG--LTWEQVEYVVDAFKEIA 360 (361)
T ss_pred chhHHHHHHHcCce-EE--cCCCceEEEEEecC--CCHHHHHHHHHHHHHHh
Confidence 12577888888854 21 11223489998833 58999999999998653
No 44
>PRK14012 cysteine desulfurase; Provisional
Probab=99.95 E-value=5.7e-26 Score=229.43 Aligned_cols=304 Identities=17% Similarity=0.203 Sum_probs=206.0
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH-
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI- 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~- 194 (486)
..-+++.+++++++|.+.+ .+++++|||+++..++.+......+ +++.|+++..+|+++..+++.
T Consensus 49 ~~~~~~r~~ia~~~g~~~~-------~v~~~~g~t~al~~~l~~l~~~~~~-------~gd~Vi~~~~~~~s~~~~~~~~ 114 (404)
T PRK14012 49 EAVDIARNQIADLIGADPR-------EIVFTSGATESDNLAIKGAAHFYQK-------KGKHIITSKTEHKAVLDTCRQL 114 (404)
T ss_pred HHHHHHHHHHHHHcCcCcC-------eEEEeCCHHHHHHHHHHHHHHhhcC-------CCCEEEEecCccHHHHHHHHHH
Confidence 3444566779999998764 5899999999998888765432111 567899999999998776654
Q ss_pred --hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 195 --GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 195 --~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
.|+ +++.++++++ +.+|+++|+++|+++ +.+|++++.+|++|.+.|+++|.++|+++|+++|+|+|+
T Consensus 115 ~~~g~---~~~~v~~~~~--g~~d~~~l~~~i~~~------t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~ 183 (404)
T PRK14012 115 EREGF---EVTYLDPQSN--GIIDLEKLEAAMRDD------TILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQ 183 (404)
T ss_pred HhCCC---EEEEEccCCC--CcCCHHHHHHhcCCC------CEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcch
Confidence 488 9999998854 589999999999654 358999999999999999999999999999999999999
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLG 352 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 352 (486)
+.+....+ ... .++|++++++||++ +|.++|++++++.... ...+.+. .... . ..++.+
T Consensus 184 ~~g~~~~~-~~~-----~~~D~~~~s~~K~~-gp~g~G~l~~~~~~~~----~~~~~~~-g~~~------~---~~~~~g 242 (404)
T PRK14012 184 SVGKVPID-LSK-----LKVDLMSFSAHKIY-GPKGIGALYVRRKPRV----RLEAQMH-GGGH------E---RGMRSG 242 (404)
T ss_pred hcCCcccC-ccc-----CCCCEEEEehhhcc-CCCceEEEEEecCCCC----CCCceec-CCCc------c---CCccCC
Confidence 87654332 111 16899999999955 5889999999875321 1111111 1000 0 001111
Q ss_pred CC-C-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CceEEEEEecCCCCCcccchHHH
Q 041829 353 RR-F-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----IFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 353 r~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
.. . ..+.+-.++... ..+..+..++..++++++.+.|++++++.+..++ ....++|...+ .+
T Consensus 243 t~~~~~~~~l~~al~~~-~~~~~~~~~~~~~l~~~l~~~L~~~~~i~~~~~~~~~~~~~~~~~~~~~~-------~~--- 311 (404)
T PRK14012 243 TLPTHQIVGMGEAARIA-KEEMATENERIRALRDRLWNGIKDIEEVYLNGDLEQRVPGNLNVSFNYVE-------GE--- 311 (404)
T ss_pred CcCHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHhcCCCEEEeCCccccCCCEEEEEEeCcC-------HH---
Confidence 11 1 112232344333 3456777888999999999999999998876431 11234444421 12
Q ss_pred HHHHHHHHc----cCcEEEEeee---------E-----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINS----TGKIFISHTV---------L-----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 426 ~~l~~~l~~----~g~~~~~~~~---------~-----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.+...|.. .|..+ .+.. + .....+|+++ ++++|++|+|+++++|+++.+++
T Consensus 312 -~~~~~l~~~~i~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~iRls~-~~~~t~~dvd~~~~~l~~~~~~~ 380 (404)
T PRK14012 312 -SLIMALKDLAVSSGSAC-TSASLEPSYVLRALGLNDELAHSSIRFSL-GRFTTEEEIDYAIELVRKSIGKL 380 (404)
T ss_pred -HHHHhCCCeEEEchhhh-CCCCCCCCHHHHHcCCChhhcCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHH
Confidence 23333321 12111 1110 0 0136899999 88999999999999999988765
No 45
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.95 E-value=1.4e-25 Score=226.58 Aligned_cols=352 Identities=12% Similarity=0.081 Sum_probs=224.8
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcC----cCccccccC-hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLN----IVGFSWITS-PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~-~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
..||++...++. +..+.+.+..+++ +....+..+ .....++++.. .+ +++|.+++ +.+|++|+|+
T Consensus 28 ~iyld~~a~g~~-p~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~l~g~~~~-------~v~~~~~~t~ 97 (406)
T TIGR01814 28 VIYLDGNSLGLM-PKAARNALKEELDKWAKIAIRGHNTGKAPWFTLDESLL-KL-RLVGAKED-------EVVVMNTLTI 97 (406)
T ss_pred cEEecCCCcCcC-cHHHHHHHHHHHHHHHHhhhccCccCCCChhhhhhhhc-cc-cccCCCCC-------cEEEeCCchH
Confidence 456765555544 5555555554432 211122221 22233444333 35 89998764 5899999998
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH----HHHHhCCCCCCe----EEEeCCCCCCCccCHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK----ACQIGGIHPQNF----RVLKTDSSTNYSLSPDSLAEA 223 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~----a~~~~g~g~~~v----~~v~~~~~~~~~id~~~L~~~ 223 (486)
++..++..... .+.++.+|+++..+|.|... .++..|+ ++ +.++.+. ++.+|++++++.
T Consensus 98 ~l~~~~~~~~~--------~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~~~~--~g~~~~~~l~~~ 164 (406)
T TIGR01814 98 NLHLLLASFYK--------PTPKRYKILLEAKAFPSDHYAIESQLQLHGL---TVEESMVQIEPRE--EETLRLEDILDT 164 (406)
T ss_pred HHHHHHHHhcC--------CcCCccEEEecCCCCChHHHHHHHHHHhcCC---CcccceEEeccCC--CCccCHHHHHHH
Confidence 87776654311 11123478889899998554 3456677 76 4566553 358899999998
Q ss_pred HHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeeccccc
Q 041829 224 ISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWF 303 (486)
Q Consensus 224 i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l 303 (486)
+++.. .++.+|++++.++.+|.+.|+++|+++|+++|++++||++++.+....+- .. .++|.+++++|||+
T Consensus 165 ~~~~~---~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~-~~-----~gvD~~~~s~hK~l 235 (406)
T TIGR01814 165 IEKNG---DDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDL-HD-----WGVDFACWCTYKYL 235 (406)
T ss_pred HHhcC---CCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCccccc-cc-----CCCCEEEEcCcccc
Confidence 86431 23568999999999999999999999999999999999999987765432 11 17999999999999
Q ss_pred CCCCcceEEEEeCchHHHHHhcCCcccccccccc-cC--CccCCCCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHH
Q 041829 304 LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQ-AN--MVVDYKDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRN 378 (486)
Q Consensus 304 ~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~-~~--~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~ 378 (486)
++|+| |+++++.+. +........+|....... .. .........++.|.+ .....+..+++.+...|+++..++
T Consensus 236 ~g~pG-~~l~v~~~~-~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~~ 313 (406)
T TIGR01814 236 NAGPG-AGAFVHEKH-AHTERPRLAGWWGHARPTRFKMDNTLGLIPCGFRISNPPILSVAALRGSLDIFDQAGMEALRKK 313 (406)
T ss_pred CCCCC-eEEEEehhh-hhhcCCCCCcccCCCCccccccccccCCCccceeeCCccHHHHHHHHHHHHHHHhcCHHHHHHH
Confidence 87777 666665543 211111111221111000 00 000011111122222 122455567777767788899999
Q ss_pred HHHHHHHHHHHHhcC----CCeEEecCC----CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeE
Q 041829 379 HIQLAKHFEGLVAQD----LRFEVVTPR----IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYI 450 (486)
Q Consensus 379 ~~~~a~~l~~~l~~~----~~~~~~~~~----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~ 450 (486)
..++++++++.|++. ++++++.+. ..++++|.+. .. ..++.+.|.++|. ++. ..+..+
T Consensus 314 ~~~l~~~l~~~l~~~~~~~~~~~i~~~~~~~~r~~~v~~~~~-~~---------~~~~~~~L~~~gi-~v~---~~~~~~ 379 (406)
T TIGR01814 314 SLLLTDYLEELIKARCGGPPVLTIITPRDHAQRGCQLSLTHP-VP---------GKAVFQALIKRGV-IGD---KREPSV 379 (406)
T ss_pred HHHHHHHHHHHHHhhcCCCCceEEeCCCChhhcCCeEEEEec-CC---------HHHHHHHHHHCCE-EEe---ccCCCe
Confidence 999999999999875 468888643 2457888875 11 1456777777774 443 223358
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 451 LRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 451 lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+|+|+++.++|++||++++++|+++.
T Consensus 380 iRiS~~~~~nt~~did~l~~~l~~~~ 405 (406)
T TIGR01814 380 IRVAPVPLYNTFVDVYDAVNVLEEIL 405 (406)
T ss_pred EEEechhccCCHHHHHHHHHHHHHHh
Confidence 99998557999999999999998764
No 46
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.95 E-value=1.1e-25 Score=224.41 Aligned_cols=347 Identities=12% Similarity=0.061 Sum_probs=228.8
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHH
Q 041829 82 YYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAAR 161 (486)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 161 (486)
+.|++......+.+.+...+. .+ .+....+.+++++.+++++|.++++ ...++|+|||+++..++....
T Consensus 7 ~~pgp~~~~~~v~~~~~~~~~----~~--~~~~~~~~~~~r~~la~l~~~~~~~-----~~i~~t~~~t~al~~~~~~l~ 75 (363)
T TIGR02326 7 LTPGPLTTSRTVKEAMLFDWC----TW--DSDYNIVVEQIRQQLLALATAEEGY-----TSVLLQGSGTFAVEAVIGSAV 75 (363)
T ss_pred ecCCCCCCCHHHHHHhCCCCC----CC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCCHHHHHHHHHhcC
Confidence 456665555555554433221 22 3566777788899999999997531 147899999999887776543
Q ss_pred HHHHHHhCccCCCCeEEEecCCCchh-HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEe
Q 041829 162 DKALKRVGKNSLEKLVVYASDQTHSA-LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCAT 240 (486)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~ 240 (486)
.. ++.+|+++...|.+ +.+.++..|+ +++.+|++++ +.+|++++++++++.++ +.+|.++
T Consensus 76 ~~----------~~~vlv~~~~~~~~~~~~~a~~~g~---~~~~v~~~~~--~~~d~~~l~~~l~~~~~----~~~v~~~ 136 (363)
T TIGR02326 76 PK----------DGKLLVVINGAYGARIVQIAEYLGI---PHHVVDTGEV--EPPDVVEVEAILAADPA----ITHIALV 136 (363)
T ss_pred CC----------CCeEEEEeCChhhHHHHHHHHHcCC---ceEEEeCCCC--CCCCHHHHHHHHhhCCC----ccEEEEE
Confidence 21 44556666666655 3577888999 9999998864 48999999999876421 3467888
Q ss_pred cCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHH
Q 041829 241 VGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 241 ~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
+.+|+||.+.|+++|+++||++|++++||++++.+....+ .. .+ ++|.++.++|||+++|.|.|+++++++. +
T Consensus 137 ~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~-~~----~~-~~D~~~~s~~K~l~~p~G~G~l~~~~~~-~ 209 (363)
T TIGR02326 137 HCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPID-IA----EL-HIDYLISSANKCIQGVPGFGFVIARQAE-L 209 (363)
T ss_pred eecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccc-hh----hc-CccEEEecCccccccCCcceEEEECHHH-H
Confidence 8899999999999999999999999999998875443222 11 12 6899999999999999999999997653 3
Q ss_pred HHHhcCCcc-cccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 041829 321 IQSLSTNPE-FLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFE 397 (486)
Q Consensus 321 ~~~~~~~~~-yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~ 397 (486)
.+......+ |+.....-. ......-....+.. ....++..+++.+..+ +++++.+++.++++++++.|+++ |++
T Consensus 210 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~~~~~~l~~~L~~~-g~~ 286 (363)
T TIGR02326 210 AACKGNARSLSLDLYDQWR--CMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQQNQKTLVAGMRAL-GFE 286 (363)
T ss_pred HHhhcCCCceeecHHHHHH--HHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCe
Confidence 222111111 111000000 00000000000111 1234555667666554 58888899999999999999988 888
Q ss_pred EecCC--CceE-EEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 398 VVTPR--IFSL-VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 398 ~~~~~--~~~~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
++.++ ..++ ++|.+.+.. .....++.+.|.++| +++.+....+..++|+++ +.+++.+|+++++++|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~~L~~~g-i~v~~g~~~~~~~iRi~~-~~~~~~edv~~~l~~l~~ 358 (363)
T TIGR02326 287 PLLDDEIQSPIITSFYSPEDP------DYRFADFYQRLKEQG-FVIYPGKVSQVDCFRIGN-IGEVDAADITRLLTAIGK 358 (363)
T ss_pred eccCcccCCceEEEEECCCCC------CCCHHHHHHHHHHCC-EEEECCcCCCCCEEEEec-CCCCCHHHHHHHHHHHHH
Confidence 86543 3443 456654310 011245777777777 555544322346899998 557899999999999987
Q ss_pred HH
Q 041829 475 KA 476 (486)
Q Consensus 475 ~~ 476 (486)
+.
T Consensus 359 ~l 360 (363)
T TIGR02326 359 AM 360 (363)
T ss_pred Hh
Confidence 64
No 47
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.95 E-value=1.3e-25 Score=226.78 Aligned_cols=339 Identities=16% Similarity=0.145 Sum_probs=224.2
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCcC----ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNIV----GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAV 153 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~ 153 (486)
.|+++-.+++.+.. +.+.+...+... ...|..+....++.+++.+.+++++|.+.. ..++++|+|+++
T Consensus 19 ~yl~~~~~~~~p~~-v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ia~~~~~~~~-------~v~~~~~~t~~l 90 (397)
T TIGR01976 19 VFFDNPAGTQIPQS-VADAVSAALTRSNANRGGAYESSRRADQVVDDAREAVADLLNADPP-------EVVFGANATSLT 90 (397)
T ss_pred EEecCCccCCCCHH-HHHHHHHHHHhcCCCCCCCchHHHHHHHHHHHHHHHHHHHcCCCCC-------eEEEeCCHHHHH
Confidence 56666444443333 444444433221 122333445566777888889999998764 488889988886
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh
Q 041829 154 LVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT 229 (486)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~ 229 (486)
..++.+.... . .+++.|+++...|+|.. ..++..|+ +++.++++++ ++.+|+++|++++++.
T Consensus 91 ~~~~~~~~~~-~-------~~gd~vl~~~~~~~s~~~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~i~~~-- 156 (397)
T TIGR01976 91 FLLSRAISRR-W-------GPGDEVIVTRLDHEANISPWLQAAERAGA---KVKWARVDEA-TGELHPDDLASLLSPR-- 156 (397)
T ss_pred HHHHHHHHhc-C-------CCCCEEEEcCCchHhHHHHHHHHHHhcCC---EEEEEecccc-CCCcCHHHHHHhcCCC--
Confidence 6554433211 0 15678888999998754 45677899 9999998763 3689999999998653
Q ss_pred CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcc
Q 041829 230 IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDC 309 (486)
Q Consensus 230 ~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~ 309 (486)
+.+|++++++|++|.+.|+++|+++|+++|++++||++++.+....+ ... .++|.+++++|||++ |. +
T Consensus 157 ----~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~-~~~-----~~~d~~~~s~~K~~g-~~-~ 224 (397)
T TIGR01976 157 ----TRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLID-VQA-----TGADFLTCSAYKFFG-PH-M 224 (397)
T ss_pred ----ceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCC-HHH-----cCCCEEEEechhhcC-Cc-e
Confidence 35899999999999999999999999999999999999865432221 111 168999999999985 43 7
Q ss_pred eEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-C-CcHHHHHHHHHhChh--------------hHH
Q 041829 310 SALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-F-RSLKLWMVLRLYGLE--------------NLQ 373 (486)
Q Consensus 310 g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~-~~l~~~~~l~~~g~~--------------g~~ 373 (486)
|+++++++ .+.........|..... ...++.|.+ + ..+.+..+++.+... +++
T Consensus 225 G~l~~~~~-~~~~l~~~~~~~~~~~~----------~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~ 293 (397)
T TIGR01976 225 GILWGRPE-LLMNLPPYKLTFSYDTG----------PERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQ 293 (397)
T ss_pred EEEEEcHH-HHhhCCCccccCccCCC----------cchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHH
Confidence 88888654 23222111112211110 001222222 1 223455555554222 367
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecC----CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee-----
Q 041829 374 GYIRNHIQLAKHFEGLVAQDLRFEVVTP----RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV----- 444 (486)
Q Consensus 374 ~~~~~~~~~a~~l~~~l~~~~~~~~~~~----~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----- 444 (486)
+..++..++++++++.|+++++++++.+ +..+++.|.+... + ..++.++|.+.| +.+....
T Consensus 294 ~~~~~~~~l~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~--~~~l~~~L~~~g-I~v~~~~~~~~~ 363 (397)
T TIGR01976 294 AIDAYENRLAEYLLVGLSDLPGVTLYGVARLAARVPTVSFTVHGL-------P--PQRVVRRLADQG-IDAWAGHFYAVR 363 (397)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCEEEeCCCCccCCCceEEEEeCCc-------C--HHHHHHHHHHCC-eEEEeCccchHH
Confidence 7788889999999999999988998754 2567787776421 1 245777787777 4444321
Q ss_pred ------E-CCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 445 ------L-SGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 445 ------~-~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
. ....++|+++ ++++|++|+++++++|
T Consensus 364 ~~~~~~~~~~~~~iRis~-~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 364 LLRRLGLNDEGGVVRVGL-AHYNTAEEVDRLLEAL 397 (397)
T ss_pred HHHHhCCCCCCCeEEEEe-eccCCHHHHHHHHHhC
Confidence 1 1235899999 8899999999999875
No 48
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.95 E-value=4.3e-26 Score=218.36 Aligned_cols=352 Identities=17% Similarity=0.148 Sum_probs=222.5
Q ss_pred cCCCCcccccCCCCCCHHHHHHHH---HHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCch
Q 041829 73 HWQSPNYFAYYPSNSSVAGFLGEM---LSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTA 149 (486)
Q Consensus 73 ~~~~p~~~~~~~~~~~~~~~~~~~---l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~gg 149 (486)
+...|-|++....+|..+.++..+ +..++.++... ..+-....--+++++.+|+|+|.++. +++||+|+
T Consensus 40 ~~~~~vyld~~at~p~~~~Vldam~~~~~~~~~nPh~~-~y~w~~~~~~E~aR~~VAklInAd~~-------dIiFts~A 111 (428)
T KOG1549|consen 40 HGTRPVYLDNQATGPMDPRVLDAMLPYLLEYLGNPHSR-SYGWKAEDAVEAAREQVAKLINADPS-------DIVFTSGA 111 (428)
T ss_pred CCCccEEEecCcCCCCCHHHHHHHHHHHHHhhcCCCcc-ccchhhhHHHHHHHHHHHHHhCCCCC-------cEEEeCCc
Confidence 334677888776666666655444 33444333222 12222232234567889999999886 69999999
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh---CCCCCCeEEEeCCCCCCCccCHHHHHHHHHH
Q 041829 150 SEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG---GIHPQNFRVLKTDSSTNYSLSPDSLAEAISR 226 (486)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~---g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~ 226 (486)
||+|.+++...-... . . + .+..|++...+|.++..+++.+ |+ +++.+|++. ++..|.+.+++.|++
T Consensus 112 TEs~Nlvl~~v~~~~-~---~-~-~~k~iitl~~eH~~v~~s~~~l~~~g~---~Vt~lpv~~--~~~~d~~~~~~~i~~ 180 (428)
T KOG1549|consen 112 TESNNLVLKGVARFF-G---D-K-TKKHIITLQTEHPCVLDSCRALQEEGL---EVTYLPVED--SGLVDISKLREAIRS 180 (428)
T ss_pred hHHHHHHHHHhhccc-c---c-c-ccceEEEecccCcchhHHHHHHHhcCe---EEEEeccCc--cccccHHHHHHhcCC
Confidence 999998886532211 0 0 0 2227888999999999988876 77 999999984 469999999999998
Q ss_pred HHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC
Q 041829 227 DLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN 306 (486)
Q Consensus 227 ~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p 306 (486)
++ .+|.+.+.++.+|...|++||+++||++|+.+|+|+||+.+....+- ..+ ++|.++++.|||++.|
T Consensus 181 ~T------~lv~I~~Vnn~~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i~vDV-~el-----n~D~~s~s~HK~ygp~ 248 (428)
T KOG1549|consen 181 KT------RLVSIMHVNNEIGVLQPVKEIVKICREEGVQVHVDAAQAVGKIPVDV-QEL-----NADFLSISAHKIYGPP 248 (428)
T ss_pred Cc------eEEEEEecccCccccccHHHHHHHhCcCCcEEEeehhhhcCCccccH-HHc-----CchheeeecccccCCC
Confidence 75 48999999999999999999999999999999999999988766542 222 7999999999999877
Q ss_pred CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC--CcHHHHHHHHHhC--hhhHHHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF--RSLKLWMVLRLYG--LENLQGYIRNHIQL 382 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~--~~l~~~~~l~~~g--~~g~~~~~~~~~~~ 382 (486)
. +|++++|.+.. .+...+++..+... .+ +..|... .++.+-.+.+..- ..+.+.++. ++
T Consensus 249 ~-iGaLYvr~~~~---~~~~~p~~~GGgq~-----r~-----~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~---~~ 311 (428)
T KOG1549|consen 249 G-IGALYVRRKRP---RLRVEPPLSGGGQE-----RG-----LRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIK---RL 311 (428)
T ss_pred c-ceEEEEccCCC---cccccCcccCCccc-----cc-----cccCCcCchhhhhhHHHHHHHHhhcchhHHHHH---HH
Confidence 5 99999997221 12334454433211 11 1122221 2233334444431 222333332 34
Q ss_pred HHHHHHHH-hcCCCeEEecCC-----CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEe----e---------
Q 041829 383 AKHFEGLV-AQDLRFEVVTPR-----IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISH----T--------- 443 (486)
Q Consensus 383 a~~l~~~l-~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~----~--------- 443 (486)
-..+...+ ...+...+...+ .+..+.|.+.. + ..+...+.+.-..+|..+.+. .
T Consensus 312 ~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-g------~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~ 384 (428)
T KOG1549|consen 312 SEKLLMGIGQSLPEVTLNGSGKSRYPGLVSLSFPYVE-G------ESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVD 384 (428)
T ss_pred HHHHHHHHhhhCchhhccCCcccccccceeeeccccc-C------cchhhhhhhhhhcccchhhcCCCCcchhhhhcCcc
Confidence 44555444 335555554422 23333444211 1 011112222222223222111 1
Q ss_pred eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 444 VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 444 ~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
....+.++||++ ..+|+++|++++.+.+.+.+..+.
T Consensus 385 ~~~~~~~iRis~-G~y~t~~di~~~~~~i~~~v~~~~ 420 (428)
T KOG1549|consen 385 EDLAHSSIRISI-GRYTTEEDIDYLVDAIKKLVSLLR 420 (428)
T ss_pred hhhhcceeEEee-eeeCcHHHHHHHHHHHHHHHHhcc
Confidence 012347899999 889999999999999998876543
No 49
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.95 E-value=2.5e-25 Score=214.32 Aligned_cols=323 Identities=18% Similarity=0.148 Sum_probs=234.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch--
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS-- 186 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-- 186 (486)
..+|.+..+-+++++.+..+|+.+..+ ..+++++||.+...++..... +++.|++....-+
T Consensus 31 h~s~~F~~~~~~~~~~L~~v~~t~~~~------~~ll~gsGt~amEAav~sl~~-----------pgdkVLv~~nG~FG~ 93 (383)
T COG0075 31 HRSPDFVGIMKEVLEKLRKVFGTENGD------VVLLSGSGTLAMEAAVASLVE-----------PGDKVLVVVNGKFGE 93 (383)
T ss_pred CCCHHHHHHHHHHHHHHHHHhcCCCCc------EEEEcCCcHHHHHHHHHhccC-----------CCCeEEEEeCChHHH
Confidence 468999999999999999999987432 367788898777766654443 5666665555544
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
.+.+.++.+|. +++.+...+.. .+|+++++++|+++. .+.+|.++++.|+||...|+++|+++|++||..+
T Consensus 94 R~~~ia~~~g~---~v~~~~~~wg~--~v~p~~v~~~L~~~~----~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~ 164 (383)
T COG0075 94 RFAEIAERYGA---EVVVLEVEWGE--AVDPEEVEEALDKDP----DIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALL 164 (383)
T ss_pred HHHHHHHHhCC---ceEEEeCCCCC--CCCHHHHHHHHhcCC----CccEEEEEeccCcccccCcHHHHHHHHHHcCCEE
Confidence 47889999999 99999998765 899999999998543 2458999999999999999999999999999999
Q ss_pred Eeeccc--cchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcc--cccccccccCCcc
Q 041829 267 HVDAAY--AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPE--FLKNKASQANMVV 342 (486)
Q Consensus 267 hvD~A~--g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~--yl~~~~~~~~~~~ 342 (486)
+||+.- ||--+..+++ ++|.+...+||++++|+|.+++.++++. +........+ |+.-..... .+
T Consensus 165 iVDaVsS~Gg~~~~vd~w--------giDv~itgSQK~l~~PPGla~v~~S~~a-~e~~~~~~~~~~ylDL~~~~~--~~ 233 (383)
T COG0075 165 IVDAVSSLGGEPLKVDEW--------GIDVAITGSQKALGAPPGLAFVAVSERA-LEAIEERKHPSFYLDLKKWLK--YM 233 (383)
T ss_pred EEEecccCCCcccchhhc--------CccEEEecCchhccCCCccceeEECHHH-HHHHhcCCCCceeecHHHHHH--HH
Confidence 999854 4433334444 8999999999999999999999998865 3333333322 442221100 00
Q ss_pred CCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--Cc-eEEEEEecCCCCCc
Q 041829 343 DYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR--IF-SLVCFRLLPPHNDE 418 (486)
Q Consensus 343 ~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~--~~-~~v~f~~~~~~~~~ 418 (486)
+-. .....+-+ ...+++-.+++.+-.+|++.+++|++.+++++++.++++ ||+++.++ .+ .+.++.. |.+
T Consensus 234 ~~~-~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~~~~al-Gl~~~~~~~~~s~tvta~~~-P~g--- 307 (383)
T COG0075 234 EKK-GSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRAGLEAL-GLELFADPERRSPTVTAIKV-PEG--- 307 (383)
T ss_pred hhc-CCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc-CCccccCcccCCCceEEEEC-CCC---
Confidence 000 01111111 122577788888889999999999999999999999999 99998743 23 3445554 433
Q ss_pred ccchHHHHHHHHHHHccCcEEEEeee--ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 419 DHGNKLNHKLLDDINSTGKIFISHTV--LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 419 ~~~~~~~~~l~~~l~~~g~~~~~~~~--~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.+. .++...+.++..+.+++.. +.|+ ++||..|. ..+.+|+..++++|+.++.++-
T Consensus 308 --~~~--~~~~~~~~~~~g~~i~gg~~~l~gk-ifRIGhMG-~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 308 --VDD--KKVRRALLKEYGVEIAGGQGPLKGK-IFRIGHMG-NVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred --CCc--HHHHHHHHHhCCEEecccccccCcc-EEEEecCc-cCCHHHHHHHHHHHHHHHHHcC
Confidence 121 2333356666556666553 3444 99999966 8899999999999999887653
No 50
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=3.7e-24 Score=213.50 Aligned_cols=310 Identities=15% Similarity=0.134 Sum_probs=208.9
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCC
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHP 199 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~ 199 (486)
+..+.+++++|.+. ..+++||++++..++.+... +++.|+++...|++...+++..|+
T Consensus 55 ~~~e~lA~~~g~~~---------~~i~~g~~~a~~~~~~~l~~-----------~gd~Vl~~~~~h~s~~~~~~~~g~-- 112 (370)
T TIGR02539 55 DFLEDLAEFLGMDE---------ARVTHGAREGKFAVMHALCK-----------EGDWVVLDGLAHYTSYVAAERAGL-- 112 (370)
T ss_pred HHHHHHHHHhCCCc---------eEEECChHHHHHHHHHHhhC-----------CCCEEEECCcccHHHHHHHHHcCC--
Confidence 33444999999875 57789999998877765432 677899999999999999999999
Q ss_pred CCeEEEeCCCCCCCccCHHHHHHHHHHHHhC-CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 200 QNFRVLKTDSSTNYSLSPDSLAEAISRDLTI-GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 200 ~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~-g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
+++.+|.+.+.+|.+|+++|++++++.++. +..+.+|+++++++++|.+.|+++|+++|+++|++++||+||+.+.+.
T Consensus 113 -~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~ 191 (370)
T TIGR02539 113 -NVKEVPHTGHPEYKVDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMP 191 (370)
T ss_pred -EEEEEecCCcccCCcCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcC
Confidence 999999875445899999999999764322 234678999999999999999999999999999999999999865322
Q ss_pred CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCc
Q 041829 279 CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRS 357 (486)
Q Consensus 279 ~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~ 357 (486)
.+ ... .++|.++.++||+++.+.++|+++.++ +.+........+|...... .+..+.. ..+
T Consensus 192 ~~-~~~-----~~~di~v~s~sK~~~~~g~~G~l~~~~-~~i~~l~~~~~~~~~~~~~-----------~~~~~~~~~~~ 253 (370)
T TIGR02539 192 VS-AKE-----IGADFIVGSGHKSMAASGPCGVLGMSE-EWEDIVLRKSRYSPVKEVE-----------LLGCTSRGAPI 253 (370)
T ss_pred CC-HHH-----cCCCEEEeeCcccccCCCCEEEEEECH-HHHhhhcccccCCccceee-----------eecccccccHH
Confidence 11 111 158999999999998777789888764 3333222222233221100 0011111 122
Q ss_pred HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCceEEEEEecCCCCCcccchHHHHHHHHHHHcc
Q 041829 358 LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV--TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST 435 (486)
Q Consensus 358 l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~ 435 (486)
..++.++... .+.++ ..++..+++++|++.|+++ |++++ .++..+++.++++...............+.+.|.++
T Consensus 254 ~~~~~al~~~-~~~l~-~~~~~~~~~~~l~~~L~~~-g~~~~~~~~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~ 330 (370)
T TIGR02539 254 VTMMASFPHV-VERVK-RWDEEVKKTRWFVAELEDI-GFIQLGQKPKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKR 330 (370)
T ss_pred HHHHHHHHHH-HHHHH-HHHHHHHHHHHHHHHHHhC-CcEEEccCCCcCceEEEECCchhHHhhhhccccHHHHHHHHhC
Confidence 3334444321 22232 2344556678999999998 79875 356677887775321000000011224678888888
Q ss_pred CcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 436 GKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 436 g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
|.+.+.+ ....++|+++ . ..+++|+++++++|+++.++
T Consensus 331 GI~~ir~---~~~~~iRis~-~-~~t~e~i~~l~~~L~~~~~~ 368 (370)
T TIGR02539 331 GIHGIRS---GQTKYFKLSV-Y-GLTKEQVEYVVDSFEEIVEE 368 (370)
T ss_pred CCccccC---CcceEEEEEe-c-CCCHHHHHHHHHHHHHHHHh
Confidence 8542332 2235899998 4 35999999999999987654
No 51
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.94 E-value=1.6e-24 Score=215.58 Aligned_cols=346 Identities=15% Similarity=0.118 Sum_probs=225.3
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHH
Q 041829 82 YYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAAR 161 (486)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 161 (486)
|.|++..++..+.+.+...++. + .+...++..++.+.+++++|.++.. ...++++|||+++..++....
T Consensus 3 ~~p~p~~~~~~~~~~~~~~~~~----~--~~~~~~~~~~~~~~la~~~~~~~~~-----~~i~~~~~gt~~l~~~~~~~~ 71 (355)
T TIGR03301 3 LTPGPLSTSATVRDAMLVDWCH----W--DSEFNDVTDQVRDRLLALAGGDDNH-----TCVLLQGSGTFAVEATIGSLV 71 (355)
T ss_pred CcCCCCCCCHHHHHHhhhhccC----C--CHHHHHHHHHHHHHHHHHhcCCCCC-----cEEEEeCCcHHHHHHHHHhcc
Confidence 3466666666666666553332 1 2333467777888899999998641 136689999999888776543
Q ss_pred HHHHHHhCccCCCCeEEEecCCCchh-HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEe
Q 041829 162 DKALKRVGKNSLEKLVVYASDQTHSA-LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCAT 240 (486)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s-~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~ 240 (486)
.. ++.+++++...+.+ +..+++..|+ +++.++.+.+ +.+|+++|++++++.+ .+.+|+.+
T Consensus 72 ~~----------~~~vi~~~~~~~~~~~~~~a~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~~ 132 (355)
T TIGR03301 72 PR----------DGKLLVLINGAYGERLAKICEYLGI---PHTDLNFSEY--EPPDLNRIEEALAADP----DITHVATV 132 (355)
T ss_pred CC----------CCeEEEECCCchhhHHHHHHHHcCC---ceEEEecCCC--CCCCHHHHHHHHHhCC----CceEEEEE
Confidence 31 33445555555544 5677888999 9999998753 5899999999997532 24577788
Q ss_pred cCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHH
Q 041829 241 VGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 241 ~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
+++|++|.+.|+++|+++|+++|+++++|++++.+....+ . ... ++|.++.++|||+++|.|+|+++++++ .+
T Consensus 133 ~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~-~----~~~-~~d~~~~s~~K~l~~~~G~g~~~~~~~-~~ 205 (355)
T TIGR03301 133 HHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPID-I----EEL-DVDALIASANKCLEGVPGFGFVIARRD-LL 205 (355)
T ss_pred ecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccc-h----hhc-CccEEEecCCcccccCCceeEEEECHH-HH
Confidence 8999999999999999999999999999997754332211 1 111 689999999999988889999988764 23
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLEN-LQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
........++........... ........+.. ....++..+++.+..+| +++..++..++++++.+.|+++ ++++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~~~L~~~-g~~~ 282 (355)
T TIGR03301 206 EASAGNARSLYLDLYDQWAYM--EKTGKWRFTPPTHTVYAFAQALEELEAEGGVPARIARYRRNRELLVDGLRAL-GFQP 282 (355)
T ss_pred HHhhCCCCCceeeHHHHHHHh--hhcCCCCCCCcHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHc-CCee
Confidence 322211112211100000000 00000001111 11234455677665565 8888999999999999999987 8887
Q ss_pred ecCCC--ce-EEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 399 VTPRI--FS-LVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 399 ~~~~~--~~-~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+.++. .+ +++|+++... +....++.++|.++| +.+.+.......++|+++ +.+++++|++++++.|+++
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~~g-i~i~~~~~~~~~~iRis~-~~~~~~~~i~~~~~~l~~~ 354 (355)
T TIGR03301 283 LLPERWQSPIIVSFLYPDDP------DFDFDDFYQELKERG-FVIYPGKLTLADTFRIGT-IGEIDAADIERLLEAIKDA 354 (355)
T ss_pred ecCCCCCCCcEEEEECCCCC------cchHHHHHHHHHHCC-EEEECCccccccEEEEec-CCCCCHHHHHHHHHHHHhh
Confidence 65432 22 3456654211 112246777888887 445444322236899998 7778999999999999864
No 52
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.94 E-value=2.5e-24 Score=215.10 Aligned_cols=349 Identities=13% Similarity=0.073 Sum_probs=227.0
Q ss_pred cCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHH
Q 041829 82 YYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAAR 161 (486)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~ 161 (486)
+.|++..+...+.+.+...+ ..+ ++...+...++.+.+++++|.+++. ...+++++||+++..++....
T Consensus 9 ~~pgP~~~~~~~~~a~~~~~----~~~--~~~~~~~~~~~~~~l~~l~~~~~~~-----~~i~~~~~gt~~l~~~~~~l~ 77 (368)
T PRK13479 9 LTPGPLTTSRTVREAMLRDW----GSW--DDDFNALTASVRAKLVAIATGEEGY-----TCVPLQGSGTFSVEAAIGSLV 77 (368)
T ss_pred ecCCCCCCCHHHHHHhCCCC----CCC--ChHHHHHHHHHHHHHHHHhCCCCCc-----eEEEEcCCcHHHHHHHHHhcc
Confidence 45665555555555543322 122 3445567788888999999986531 136789999999888776653
Q ss_pred HHHHHHhCccCCCCeEEEecCCCchhH--HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEE
Q 041829 162 DKALKRVGKNSLEKLVVYASDQTHSAL--QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCA 239 (486)
Q Consensus 162 ~~~~~~~~~~~~~~~~v~~s~~~H~s~--~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~ 239 (486)
. +++.+++....++.. ...++..|+ +++.||.+++ +.+|++++++++++.. .+.+|.+
T Consensus 78 ~-----------~~~~vlv~~~~~~~~~~~~~~~~~g~---~~~~i~~~~~--~~~d~~~l~~~l~~~~----~~~~v~~ 137 (368)
T PRK13479 78 P-----------RDGKVLVPDNGAYGARIAQIAEYLGI---AHVVLDTGED--EPPDAAEVEAALAADP----RITHVAL 137 (368)
T ss_pred C-----------CCCeEEEEeCCchHHHHHHHHHHcCC---cEEEEECCCC--CCCCHHHHHHHHHhCC----CCcEEEE
Confidence 2 344455544555543 478888999 9999998754 4899999999987532 1346888
Q ss_pred ecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchH
Q 041829 240 TVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNT 319 (486)
Q Consensus 240 ~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~ 319 (486)
++++|+||.+.|+++|+++|+++|++++||++++.+....+ +... ++|.+++++|||+++|.|+|+++++++.
T Consensus 138 ~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~-----~~~~-~~d~~v~s~~K~l~g~~G~G~l~~~~~~- 210 (368)
T PRK13479 138 VHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPID-----IAEL-GIDALISSANKCIEGVPGFGFVIARRSE- 210 (368)
T ss_pred EcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCcccc-----cccc-CceEEEecCccccccCCCceEEEECHHH-
Confidence 99999999999999999999999999999987654332211 1111 5899999999999999999999997642
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFE 397 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~ 397 (486)
+........+|..+.............+ ..+.. .....+..+++.+..+ ++++.+++..++++++++.|+++ |++
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~ 287 (368)
T PRK13479 211 LEACKGNSRSLSLDLYDQWAYMEKTGQW--RFTPPTHVVAAFYQALLELEEEGGVPARGARYANNQRTLVAGMRAL-GFE 287 (368)
T ss_pred HHHhhcCCCCeeecHHHHHhhhcccCCC--CCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHc-CCc
Confidence 3322222222211100000000000000 01111 1223556666665444 57888899999999999999998 888
Q ss_pred EecCCC--c-eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 398 VVTPRI--F-SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 398 ~~~~~~--~-~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
++.++. . .+++|.+.... .....++.++|.++|. .+.+.......++|+++ ..+++++|+++++++|++
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~~L~~~gi-~v~~g~~~~~~~iRis~-~~~~t~edi~~~l~~L~~ 359 (368)
T PRK13479 288 PLLDAEIQSPIIVTFHAPADP------AYDFKEFYERLKEQGF-VIYPGKLTQVDTFRIGC-IGDVDAADIRRLVAAIAE 359 (368)
T ss_pred ccCCchhcCceEEEEECCCCC------CcCHHHHHHHHHHCCE-EEecCCCCCCCEEEEec-CCCCCHHHHHHHHHHHHH
Confidence 764432 2 24566654211 0112467888888884 44443222235799987 567899999999999998
Q ss_pred HHHHH
Q 041829 475 KASAL 479 (486)
Q Consensus 475 ~~~~l 479 (486)
+.+++
T Consensus 360 ~l~~~ 364 (368)
T PRK13479 360 ALYWM 364 (368)
T ss_pred HHHHc
Confidence 87654
No 53
>PRK07179 hypothetical protein; Provisional
Probab=99.93 E-value=1.8e-23 Score=211.37 Aligned_cols=329 Identities=12% Similarity=0.106 Sum_probs=215.4
Q ss_pred CCCCcccccCCCCCCHHHHHHHHHHHhcCcC--ccccc-cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh
Q 041829 74 WQSPNYFAYYPSNSSVAGFLGEMLSAGLNIV--GFSWI-TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS 150 (486)
Q Consensus 74 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~--~~~~~-~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt 150 (486)
+.+-.|+|+. ..|.....+.+.+..+.+.. ...+. ..+...++|++ +++++|.+. .++++||+
T Consensus 59 ~~~~~YL~l~-~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~----la~~~g~~~---------~~~~~sG~ 124 (407)
T PRK07179 59 LQSNDYLNLS-GHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKK----LAAFTGFES---------CLLCQSGW 124 (407)
T ss_pred eecCCccCCC-CCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHH----HHHHhCCCc---------EEEECCHH
Confidence 3345576664 33444455555554432221 11122 22456677765 888898754 68899999
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC
Q 041829 151 EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI 230 (486)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~ 230 (486)
+||..++.+... +++.|+++...|.++...++..|. +++.++ ..|+++|++++++..
T Consensus 125 ~An~~~l~~l~~-----------~g~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~-- 181 (407)
T PRK07179 125 AANVGLLQTIAD-----------PNTPVYIDFFAHMSLWEGVRAAGA---QAHPFR-------HNDVDHLRRQIERHG-- 181 (407)
T ss_pred HHHHHHHHHhCC-----------CCCEEEEECCcCHHHHHHHHHCCC---eEEEec-------CCCHHHHHHHHHhcC--
Confidence 999888876543 566788899999999999888888 655432 469999999986521
Q ss_pred CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCC-cCCCceeeecccccCCCC
Q 041829 231 GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGV-EEADSFNMNAHKWFLTNF 307 (486)
Q Consensus 231 g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~-~~aDs~~~~~hK~l~~p~ 307 (486)
+.+|++..+++++|.+.|+++|.++|+++|+++|+|++|+.+... +..+..+ .++ ..+|.++.++||+++.+
T Consensus 182 ---~~lV~v~~v~n~tG~i~pl~~I~~l~~~~~~~livDea~~~g~~g-~~g~g~~~~~~~~~~vdi~~~S~sK~~g~~- 256 (407)
T PRK07179 182 ---PGIIVVDSVYSTTGTIAPLADIVDIAEEFGCVLVVDESHSLGTHG-PQGAGLVAELGLTSRVHFITASLAKAFAGR- 256 (407)
T ss_pred ---CeEEEECCCCCCCCccccHHHHHHHHHHcCCEEEEECcccccCcC-CCCCchHHhcCCCCCCCEEEeechHhhhcc-
Confidence 457888889999999999999999999999999999999754321 1111111 122 25799999999999753
Q ss_pred cceEEEEeCchHHHHHhc-CCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHH
Q 041829 308 DCSALWVKDRNTLIQSLS-TNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKH 385 (486)
Q Consensus 308 ~~g~l~~r~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 385 (486)
+|+++.++ +.. +.+. ...++... ++-. .....+.++++.+. ...++.++..+++++
T Consensus 257 -~G~l~~~~-~~~-~~~~~~~~~~~~~-----------------~t~~~~~~aa~~aal~~~~--~~~~~~~~l~~~~~~ 314 (407)
T PRK07179 257 -AGIITCPR-ELA-EYVPFVSYPAIFS-----------------STLLPHEIAGLEATLEVIE--SADDRRARLHANARF 314 (407)
T ss_pred -CeEEEeCH-HHH-HHHHHhCcCeeeC-----------------CCCCHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHH
Confidence 78887754 222 2221 11111110 1101 11122334454442 224577888999999
Q ss_pred HHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEE---EEeeeECCEeEEEEEecCCCCCH
Q 041829 386 FEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIF---ISHTVLSGKYILRFAVGAPLTEW 462 (486)
Q Consensus 386 l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~---~~~~~~~~~~~lRi~~~~~~~t~ 462 (486)
|++.|+++ ++++.. ..+++.+.+.. ......+.+.|.++|... ..+....+..++|+++ +..+|+
T Consensus 315 l~~~L~~~-g~~v~~--~~~i~~l~~~~--------~~~~~~~~~~L~~~GI~~~~~~~p~~~~~~~~lRis~-~~~~t~ 382 (407)
T PRK07179 315 LREGLSEL-GYNIRS--ESQIIALETGS--------ERNTEVLRDALEERNVFGAVFCAPATPKNRNLIRLSL-NADLTA 382 (407)
T ss_pred HHHHHHHc-CCCCCC--CCCEEEEEeCC--------HHHHHHHHHHHHHCCceEeeecCCCCCCCCceEEEEE-CCCCCH
Confidence 99999998 787652 34677776532 122356777787888531 1222223457999999 888999
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASA 478 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~ 478 (486)
+||++++++|+++.++
T Consensus 383 edi~~~~~~l~~~~~~ 398 (407)
T PRK07179 383 SDLDRVLEVCREARDE 398 (407)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 9999999999988765
No 54
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.93 E-value=1.1e-23 Score=228.14 Aligned_cols=366 Identities=12% Similarity=0.014 Sum_probs=232.6
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcC----cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLN----IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEA 152 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n----~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a 152 (486)
-.||.+-.+++.++..+.+++..++. ++...+..+..+.++.+++++.+++++|.++.. -..+||+|+|+|
T Consensus 35 ~iYLD~Aatt~~~~~~V~~~~~~~~~~~~~np~s~~~~s~~~~~~~e~aR~~ia~~lga~~~~-----~~VvFtsnaT~a 109 (805)
T PLN02724 35 VVYLDHAGATLYSESQLEAALADFSSNVYGNPHSQSDSSMRSSDTIESARQQVLEYFNAPPSD-----YACVFTSGATAA 109 (805)
T ss_pred CEeEeCCCCCCCCHHHHHHHHHHHHhhccCCCCcCcchhhhHHHHHHHHHHHHHHHhCCCccc-----eEEEEeCChHHH
Confidence 35777776666556666666544332 222234455667778888999999999996531 036999999999
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH---HHHhCCCCCCeEEEeCCCC------CCCccCH--HHHH
Q 041829 153 VLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA---CQIGGIHPQNFRVLKTDSS------TNYSLSP--DSLA 221 (486)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a---~~~~g~g~~~v~~v~~~~~------~~~~id~--~~L~ 221 (486)
+..+...... + +++.|+++...|.|+... ++..|+ +++.+|++.. +.+.+++ ++|+
T Consensus 110 lnlva~~l~~---~-------~gd~Iv~t~~eH~svl~~~~~a~~~G~---~v~~v~~~~~~~~~~~~~g~~~~~~~~l~ 176 (805)
T PLN02724 110 LKLVGETFPW---S-------SESHFCYTLENHNSVLGIREYALEKGA---AAIAVDIEEAANQPTNSQGSVVVKSRGLQ 176 (805)
T ss_pred HHHHHHHCCC---C-------CCCeEEEeeccccchHHHHHHHHHcCC---eEEeccchhccccccccccccccchhhhh
Confidence 7765433211 1 566788888899886643 334588 8999988621 1234443 6677
Q ss_pred HHHHHHH----hCCCccEEEEEecCCccccccCChHHHHHHHHHh-------C-CEEEeeccccchhccCccchhcccCC
Q 041829 222 EAISRDL----TIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN-------G-MWFHVDAAYAGSACICPEYRQYIDGV 289 (486)
Q Consensus 222 ~~i~~~~----~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~-------g-~~lhvD~A~g~~~~~~~~~~~~~~~~ 289 (486)
+.+++.. ..+.++.+|++++.+|.+|.+.|+++|..+++.. | ++++||||++.+....+- .. +
T Consensus 177 ~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDaaQ~~g~~piDv-~~----~ 251 (805)
T PLN02724 177 RRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDAAKGCGTSPPDL-SR----Y 251 (805)
T ss_pred hhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeehhhhcCCCCCCh-hh----c
Confidence 6653211 1122346899999999999999999876665542 3 579999999887765542 11 1
Q ss_pred cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccc---cC-C---ccCCCCCccCCCCC--CCcHHH
Q 041829 290 EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQ---AN-M---VVDYKDWQIPLGRR--FRSLKL 360 (486)
Q Consensus 290 ~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~---~~-~---~~~~~~~~~~~sr~--~~~l~~ 360 (486)
++|.+++++|||++.|.|+|++++|++. +.. ..+.|....... .. . ........++.|.. ...+++
T Consensus 252 -~~Dfl~~S~HK~~GgP~G~G~L~vr~~~-~~~---l~p~~~GGg~~~~~~~~~~~~~~~~~~~~rfE~GT~n~~~i~~l 326 (805)
T PLN02724 252 -PADFVVVSFYKIFGYPTGLGALLVRRDA-AKL---LKKKYFGGGTVAASIADIDFVKRRERVEQRFEDGTISFLSIAAL 326 (805)
T ss_pred -CCCEEEEecceeccCCCCceEEEEehhh-hhh---hcCCccCCCceEEEecccceeeccccHHHHhcCCCcchhHHHHH
Confidence 7999999999999999999999999743 221 123333221100 00 0 00001122333433 233566
Q ss_pred HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC------CeEEecCC--------CceEEEEEecCCCCCcccc-hHHH
Q 041829 361 WMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL------RFEVVTPR--------IFSLVCFRLLPPHNDEDHG-NKLN 425 (486)
Q Consensus 361 ~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~------~~~~~~~~--------~~~~v~f~~~~~~~~~~~~-~~~~ 425 (486)
..+++.+-..|++++.++..++++++.+.|++++ +++++.+. ..++|+|.+....... . ....
T Consensus 327 ~aal~~l~~ig~~~I~~~~~~L~~~l~~~L~~l~~~~g~~~v~iyg~~~~~~~~~~r~~ivsFnv~~~~~~~--v~~~~v 404 (805)
T PLN02724 327 RHGFKLLNRLTISAIAMHTWALTHYVANSLRNLKHGNGAPVCVLYGNHTFKLEFHIQGPIVTFNLKRADGSW--VGHREV 404 (805)
T ss_pred HHHHHHHHHhChHHHHHHHHHHHHHHHHHHHhccCCCCCeEEEEcCCCCCCCCcccccCEEEEEEEcCCCCE--eCHHHH
Confidence 7777777666888888999999999999999986 58887542 4579999987532110 1 1111
Q ss_pred HHHHHHHHccCcE-----EEEee-e---------------------------ECC--EeEEEEEecCCCCCHHHHHHHHH
Q 041829 426 HKLLDDINSTGKI-----FISHT-V---------------------------LSG--KYILRFAVGAPLTEWRHVNAAWE 470 (486)
Q Consensus 426 ~~l~~~l~~~g~~-----~~~~~-~---------------------------~~~--~~~lRi~~~~~~~t~~di~~~~~ 470 (486)
..+. ...|+. ++.+. . ..+ .+++|+|+ ++++|.+|||++++
T Consensus 405 ~~l~---~~~gI~vR~G~~Ca~~~~~~~lg~~~~~l~~~~~~~~~c~~~~~~~~~~~~G~vRvS~-g~ynt~eDvd~lv~ 480 (805)
T PLN02724 405 EKLA---SLSGIQLRTGCFCNPGACAKYLGLSHKDLQANFEAGHVCWDDQDVIHGRPTGAVRVSF-GYMSTFEDCQKFID 480 (805)
T ss_pred HHHH---HhcCcEEeeccccCchHHHHHcCCCHHHHHHHhhcCCccCchhheecCcccceEEEEc-CccCCHHHHHHHHH
Confidence 1221 122311 11111 0 011 37899999 99999999999999
Q ss_pred HHHHHH
Q 041829 471 VMQDKA 476 (486)
Q Consensus 471 ~l~~~~ 476 (486)
+|++..
T Consensus 481 ~l~~~~ 486 (805)
T PLN02724 481 FIISSF 486 (805)
T ss_pred HHHHHh
Confidence 999865
No 55
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.93 E-value=1.2e-23 Score=214.57 Aligned_cols=343 Identities=13% Similarity=0.068 Sum_probs=217.9
Q ss_pred ccccCCCCCCHHHHHHHHHHHhc------CcCcccc-ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEc---Cc
Q 041829 79 YFAYYPSNSSVAGFLGEMLSAGL------NIVGFSW-ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQ---GT 148 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~------n~~~~~~-~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t---~g 148 (486)
.+..+++..-+...+.+.+.+.+ .+++..| ........+|+.+++.++++||.+.+ ...++ +|
T Consensus 36 ~l~l~~sen~~s~~v~~~~~~~l~~~y~~g~p~s~~~~g~~~~~~iE~~ar~~~a~lf~a~~~-------~~~~~~~~~s 108 (452)
T PTZ00094 36 GLELIASENFTSRAVLECLGSCFTNKYAEGLPGNRYYGGNEVVDKIENLCQKRALEAFGLDPE-------EWGVNVQPYS 108 (452)
T ss_pred CeeEecccccCCHHHHHHhcchhhccccCCCCCccccccchHHHHHHHHHHHHHHHHhCCCcc-------cceeecCCCc
Confidence 44445554444444444444433 2222233 33345678887888999999998764 23344 78
Q ss_pred hhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh--------CCCCCCeEEEeCCCCCCCccCHHHH
Q 041829 149 ASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG--------GIHPQNFRVLKTDSSTNYSLSPDSL 220 (486)
Q Consensus 149 gt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~--------g~g~~~v~~v~~~~~~~~~id~~~L 220 (486)
||++|..++.+... +++.|+++...|.+....+..+ |.+. ++..++++.+ +.+|+++|
T Consensus 109 gt~an~~v~~al~~-----------~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~-~~~~~~~~~~--g~id~~~L 174 (452)
T PTZ00094 109 GSPANFAVYTALLQ-----------PHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYF-ESLPYQVNEK--GLIDYDKL 174 (452)
T ss_pred hHHHHHHHHHHhcC-----------CCCEEEecccccCCcccccccccccccccceeee-eeeecccCCC--CCcCHHHH
Confidence 99999988876532 6778999999997765443211 1100 3445556653 59999999
Q ss_pred HHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecc
Q 041829 221 AEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAH 300 (486)
Q Consensus 221 ~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~h 300 (486)
++++++.. |.+|+++ .+.+|.+.|+++|+++|+++|+++|||+||+.+.+..+-... .+.++|.+++++|
T Consensus 175 ~~~l~~~~-----~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~---~~~~~D~l~~S~h 244 (452)
T PTZ00094 175 EELAKAFR-----PKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPS---PFPYADVVTTTTH 244 (452)
T ss_pred HHHHHHhC-----CCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCC---CCCCCcEEEcCCc
Confidence 99997532 3345443 456999999999999999999999999999988765432211 1237999999999
Q ss_pred cccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHH
Q 041829 301 KWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNH 379 (486)
Q Consensus 301 K~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~ 379 (486)
||+++|.| |++++++.. ...........+.. .+.++-. ....++..+++.+...+++++.++.
T Consensus 245 K~l~GP~G-g~l~~~~~~-~~~l~~~~~~~~~p--------------~~~G~~~~~~iaal~~al~~~~~~~~~~~~~~i 308 (452)
T PTZ00094 245 KSLRGPRS-GLIFYRKKV-KPDIENKINEAVFP--------------GLQGGPHNHQIAAIAVQLKEVQSPEWKEYAKQV 308 (452)
T ss_pred cCCCCCCc-eEEEEeccc-chHHHHhhccccCC--------------CCCCCchHHHHHHHHHHHHHHhChhHHHHHHHH
Confidence 99999996 888876542 11110000001100 0112222 2334666777777666778888999
Q ss_pred HHHHHHHHHHHhcCCCeEEecCC-CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEee-eEC-----CEeEEE
Q 041829 380 IQLAKHFEGLVAQDLRFEVVTPR-IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT-VLS-----GKYILR 452 (486)
Q Consensus 380 ~~~a~~l~~~l~~~~~~~~~~~~-~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~-----~~~~lR 452 (486)
.+++++|.+.|++. |+++..+. ...++.+.+...+ .+ ...+...|.+.| ++++.. ... ..+++|
T Consensus 309 ~~l~~~l~~~L~~~-g~~v~~~~~~~~~~~v~~~~~~-----~~--~~~~~~~L~~~g-I~vs~~~~p~~~~~~~~~~vR 379 (452)
T PTZ00094 309 LKNAKALAAALEKR-GYDLVTGGTDNHLVLVDLRPFG-----IT--GSKMEKLLDAVN-ISVNKNTIPGDKSALNPSGVR 379 (452)
T ss_pred HHHHHHHHHHHHhC-CcEEecCCCCCceEeecCCcCC-----CC--HHHHHHHHHHCC-cEEecccCCCCCcCCCCCeEE
Confidence 99999999999886 89887422 1223333332211 11 134555565556 555321 111 126899
Q ss_pred EEecCCCCC----HHHHHHHHHHHHHHHHH
Q 041829 453 FAVGAPLTE----WRHVNAAWEVMQDKASA 478 (486)
Q Consensus 453 i~~~~~~~t----~~di~~~~~~l~~~~~~ 478 (486)
+++ +..|| ++||+++++.|.++++.
T Consensus 380 is~-~~~tt~g~~~~di~~l~~~l~~~~~~ 408 (452)
T PTZ00094 380 LGT-PALTTRGAKEKDFKFVADFLDRAVKL 408 (452)
T ss_pred ECC-HHHHhCCCCHHHHHHHHHHHHHHHHH
Confidence 999 77776 99999999999998874
No 56
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.93 E-value=2.2e-23 Score=206.99 Aligned_cols=276 Identities=15% Similarity=0.174 Sum_probs=192.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
+.....+.+++.+++++++|.+.+ ..++++|+|+++..++.+....... .++..|+++...|+++..
T Consensus 37 ~~~~~~~~~~~r~~la~~~g~~~~-------~v~~~~g~t~a~~~~l~~l~~~~~~------~g~~~vi~~~~~~~s~~~ 103 (353)
T TIGR03235 37 GHNAKKAVERARKQVAEALGADTE-------EVIFTSGATESNNLAILGLARAGEQ------KGKKHIITSAIEHPAVLE 103 (353)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCC-------eEEEeCCHHHHHHHHHHHHHHhccc------CCCCeeeEcccccHHHHH
Confidence 344556778899999999999764 5899999999988877665432100 023678899999999776
Q ss_pred HHH---HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 191 ACQ---IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 191 a~~---~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
... ..|+ +++.+|++++ +.+|+++|++++++. +.+|++++++|++|.+.|+++|+++|+++|+|+|
T Consensus 104 ~~~~~~~~G~---~v~~v~~~~~--~~~d~~~l~~~l~~~------~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~i 172 (353)
T TIGR03235 104 PIRALERNGF---TVTYLPVDES--GRIDVDELADAIRPD------TLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFH 172 (353)
T ss_pred HHHHHHhcCC---EEEEEccCCC--CcCCHHHHHHhCCCC------CEEEEEEcccCCceeccCHHHHHHHHHHcCCEEE
Confidence 544 4577 9999998854 589999999988543 4688899999999999999999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
||++++.+....+- . ..++|++++++||| ++|.|+|+++++++.... ....+.+..... . .
T Consensus 173 vD~a~~~g~~~~~~-~-----~~~~D~~~~s~~K~-~gp~g~g~l~~~~~~~~~--~~~~~~~~~~~~---------~-~ 233 (353)
T TIGR03235 173 VDAAQVVGKITVDL-S-----ADRIDLISCSGHKI-YGPKGIGALVIRKRGKPK--APLKPIMFGGGQ---------E-R 233 (353)
T ss_pred EEchhhcCCccccc-c-----ccCCCEEEeehhhc-CCCCceEEEEEccCcccc--cccCceeeCCCC---------c-C
Confidence 99998876654331 1 12699999999998 469899999999763211 111221111100 0 0
Q ss_pred ccCCCC-C-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---ceEEEEEecCCCCCcccch
Q 041829 348 QIPLGR-R-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI---FSLVCFRLLPPHNDEDHGN 422 (486)
Q Consensus 348 ~~~~sr-~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~---~~~v~f~~~~~~~~~~~~~ 422 (486)
.++.+. . ...+++..+++.+ .++.+++.++..++++++++.|++ +|++++.++. ..+++|.+... +
T Consensus 234 ~~~~gt~~~~~~~al~~al~~~-~~~~~~~~~~~~~l~~~l~~~l~~-~g~~~~~~~~~~~~~i~~~~~~~~-------~ 304 (353)
T TIGR03235 234 GLRPGTLPVHLIVGMGEAAEIA-RRNAQAWEVKLRAMRNQLRDALQT-LGVKLNGDPAETIPHILNFSIDGV-------N 304 (353)
T ss_pred ccccCCCChHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHhcc-CCeEEeCCcccccCCEEEEEeCCc-------C
Confidence 111121 1 1224555556654 357888899999999999999988 6999886432 34777775421 1
Q ss_pred HHHHHHHHHHHccCcEEEEe
Q 041829 423 KLNHKLLDDINSTGKIFISH 442 (486)
Q Consensus 423 ~~~~~l~~~l~~~g~~~~~~ 442 (486)
...+...|.+ + +.+++
T Consensus 305 --~~~v~~~L~~-~-i~v~~ 320 (353)
T TIGR03235 305 --SEALIVNLRA-D-AAVST 320 (353)
T ss_pred --HHHHHHHHhC-C-eEEEc
Confidence 1456666643 4 44443
No 57
>PLN02721 threonine aldolase
Probab=99.92 E-value=4.8e-23 Score=204.73 Aligned_cols=305 Identities=17% Similarity=0.156 Sum_probs=197.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|...++|++ +++++|.+. ++++++||++++.++.+.... +++.|++++.+|+++.
T Consensus 38 ~~~~~~~l~~~----la~~~~~~~---------~~~~~~Gs~a~~~~l~~~~~~----------~gd~Vl~~~~~~~~~~ 94 (353)
T PLN02721 38 YDPTALRLEEE----MAKIFGKEA---------ALFVPSGTMGNLISVLVHCDV----------RGSEVILGDNSHIHLY 94 (353)
T ss_pred CCHHHHHHHHH----HHHHhCCce---------eEEecCccHHHHHHHHHHccC----------CCCeEEEcCccceehh
Confidence 45666777777 788888753 688888999988777654321 5678889999999888
Q ss_pred H---HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCC-CccEEEEEec-CCccccccCC---hHHHHHHHHH
Q 041829 190 K---ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIG-LIPFFLCATV-GTTSSTAVDP---LLALGNIAKS 261 (486)
Q Consensus 190 ~---a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g-~~p~~vv~~~-~~t~tG~id~---l~~I~~ia~~ 261 (486)
+ .+...|+ +++.+|.+++ +.+|+++|+++|++....+ .++.+|+++. .++++|.+-| +++|.++|++
T Consensus 95 ~~~~~~~~~g~---~~~~v~~~~~--~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~ 169 (353)
T PLN02721 95 ENGGISTLGGV---HPRTVKNNED--GTMDLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKR 169 (353)
T ss_pred cccchhhhcCc---eeEecCCCcC--CCcCHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHH
Confidence 7 4677788 9999987753 6899999999997432111 2355677766 4566887744 7899999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMV 341 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~ 341 (486)
+|+++|+|+||........... ......++|++++++||++++|. |.+++.+++.+... .....+..
T Consensus 170 ~g~~livD~a~~~~~~~~~~~~-~~~~~~~~d~~~~s~sK~l~~~~--G~~~~~~~~~~~~~-~~~~~~~~--------- 236 (353)
T PLN02721 170 HGLKLHIDGARIFNASVALGVP-VHRLVKAADSVSVCLSKGLGAPV--GSVIVGSKSFIRKA-KRLRKTLG--------- 236 (353)
T ss_pred cCCEEEEEchhhhcchhhhCCC-HHHHhhhCCEEEEecccccCCce--eeEEecCHHHHHhH-HHHHHhcC---------
Confidence 9999999998753221111111 01112368999999999998774 44445555433321 11000000
Q ss_pred cCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCceEEEEEecCCCCCccc
Q 041829 342 VDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV-VTPRIFSLVCFRLLPPHNDEDH 420 (486)
Q Consensus 342 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~-~~~~~~~~v~f~~~~~~~~~~~ 420 (486)
++.........+++..+ +...+.+++..++++++.+.|++++++++ +.++..+++.+++....
T Consensus 237 ---------~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~----- 300 (353)
T PLN02721 237 ---------GGMRQVGVLAAAALVAL--QENVPKLEDDHKKAKLLAEGLNQIKGLRVNVAAVETNIVYFDITDGS----- 300 (353)
T ss_pred ---------CCeehhHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhCCCcEEecCCccceEEEEEccCCc-----
Confidence 00000111111122111 12222345556788999999999988876 55666777777774310
Q ss_pred chHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
......+.++|.+.|.. +.+. +..++|+++ +..++++|+++++++|++++.
T Consensus 301 -~~~~~~~~~~L~~~gi~-v~~~---~~~~lR~~~-~~~~~~~~i~~~~~~l~~~~~ 351 (353)
T PLN02721 301 -RITAEKLCKSLEEHGVL-LMPG---NSSRIRVVT-HHQISDSDVQYTLSCFQQAAL 351 (353)
T ss_pred -cccHHHHHHHHHhCCcE-EecC---CCceEEEEe-cCcCCHHHHHHHHHHHHHHhh
Confidence 01235678888877744 4332 345899999 778899999999999988754
No 58
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.92 E-value=1.6e-22 Score=203.98 Aligned_cols=297 Identities=11% Similarity=0.066 Sum_probs=200.0
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++.+.+++++|.+. .++++||++|+..++.+..+ +++.|+++...|.++..+++.++.
T Consensus 86 ~~le~~ia~~~g~~~---------~ii~~~~~~a~~~~~~~l~~-----------~gd~vi~~~~~~~s~~~~~~~~~~- 144 (393)
T TIGR01822 86 KELEAKIAAFLGTED---------TILYASCFDANGGLFETLLG-----------AEDAIISDALNHASIIDGVRLCKA- 144 (393)
T ss_pred HHHHHHHHHHhCCCc---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHhcCC-
Confidence 334445899999753 67778889998866554322 678899999999999999988877
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
+.+.++ .+|+++|++++++..+.+.++.+|+.....+++|.+.|+++|+++|++||+++++|++|+.+...
T Consensus 145 --~~~~~~-------~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l~~i~~la~~~~~~li~De~~~~g~~~ 215 (393)
T TIGR01822 145 --KRYRYA-------NNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPLDEICDLADKYDALVMVDECHATGFLG 215 (393)
T ss_pred --ceEEeC-------CCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCHHHHHHHHHHcCCEEEEECCccccCcC
Confidence 554432 57999999999875433335678888888899999999999999999999999999999644321
Q ss_pred Cccchh--cccCC-cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC
Q 041829 279 CPEYRQ--YIDGV-EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF 355 (486)
Q Consensus 279 ~~~~~~--~~~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 355 (486)
. .... ...++ ..+|.++.++||+++++ ..|+++.+ +...........+|.. .++...
T Consensus 216 ~-~~~~~~~~~~~~~~~di~~~s~sK~l~g~-r~G~~~~~-~~~~~~l~~~~~~~~~-----------------~~~~~~ 275 (393)
T TIGR01822 216 P-TGRGSHELCGVMGRVDIITGTLGKALGGA-SGGFTTAR-KEVVELLRQRSRPYLF-----------------SNSLPP 275 (393)
T ss_pred C-CCCchHHhcCCCCCCeEEEEEChHHhhCC-CcEEEEeC-HHHHHHHHHhCcccee-----------------cCCCCH
Confidence 1 1111 01122 25789999999998765 45776654 3333222111112211 111111
Q ss_pred -CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc
Q 041829 356 -RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS 434 (486)
Q Consensus 356 -~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~ 434 (486)
...++..+++.. +..+++.++..++++++.+.|++. ++++. ++..+++.+.+.+ .....++.+.|.+
T Consensus 276 ~~~~a~~~al~~~--~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------~~~~~~l~~~L~~ 343 (393)
T TIGR01822 276 AVVGASIKVLEML--EASNELRDRLWANTRYFRERMEAA-GFDIK-PADHPIIPVMLYD--------AVLAQRFARRLLE 343 (393)
T ss_pred HHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------HHHHHHHHHHHHH
Confidence 112233444433 234667788899999999999886 78765 3344566665432 1234678888888
Q ss_pred cCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 435 TGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 435 ~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+| +++.+..+ .+...+|+++ +..+|++||++++++|+++.+++
T Consensus 344 ~g-I~v~~~~~~~~~~~~~~iRis~-~~~~t~edi~~~~~~l~~~~~~~ 390 (393)
T TIGR01822 344 EG-IYVTGFFYPVVPKGQARIRVQI-SAAHTEEQLDRAVEAFTRIGREL 390 (393)
T ss_pred CC-eeEeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 87 55543322 2445799999 88899999999999999887643
No 59
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.92 E-value=2.6e-23 Score=207.57 Aligned_cols=347 Identities=13% Similarity=-0.011 Sum_probs=221.0
Q ss_pred CcccccCCCCCCHHHH-HHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEc-CchhHHHH
Q 041829 77 PNYFAYYPSNSSVAGF-LGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQ-GTASEAVL 154 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~-~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t-~ggt~a~~ 154 (486)
|.-..|.|++...+.. +-+.+...+- .....++.+.++.+++++.+++++|.++.+ ..+|+ +|||.++.
T Consensus 11 ~~~~~f~~Gp~~~~~~~v~~a~~~~~~---~~~hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~~~~gs~T~~~~ 81 (378)
T PRK03080 11 PADPRFSSGPCKKRPGWQLEALADALL---GRSHRQKPVKALLKRVIEGTRELLSLPEGY------EVGIVPGSDTGAWE 81 (378)
T ss_pred CCCCCcCCCCcCCChHHHHHHHHhhhc---ccCcCCHHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchHHHHH
Confidence 4333355655444433 5555543221 111345678899999999999999986531 36666 58888877
Q ss_pred HHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH--HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCC
Q 041829 155 VVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK--ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGL 232 (486)
Q Consensus 155 ~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~--a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~ 232 (486)
.++..... . ++..+++ ...|.+-.. +++.+|+ .+++.++.++++ .+|+++++. +
T Consensus 82 ~~~~~l~~----~------~~~~vi~-~g~f~~~~~~~~~~~~g~--~~v~~~~~~~g~--~~d~~~i~~-----~---- 137 (378)
T PRK03080 82 MALWSLLG----A------RRVDHLA-WESFGSKWATDVVKQLKL--EDPRVLEADYGS--LPDLSAVDF-----D---- 137 (378)
T ss_pred HHHHhcCC----C------CcceEEE-eCHHHHHHHHHHHhhcCC--CCceEeccCCCC--CCCHhhcCC-----C----
Confidence 66644311 0 2444444 457766443 2345554 267777776543 778776432 1
Q ss_pred ccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEE
Q 041829 233 IPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSAL 312 (486)
Q Consensus 233 ~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l 312 (486)
..|++++.+|.||.+.|+++|++ +++|++++||++++.+....+- +.+|.+.+++|||+++|.|+|++
T Consensus 138 --~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv--------~~iD~~~~s~~K~l~~P~G~g~l 205 (378)
T PRK03080 138 --RDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDW--------SKLDVYTFSWQKVLGGEGGHGMA 205 (378)
T ss_pred --CCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCH--------HHCcEEEEehhhhCCCCCceEEE
Confidence 24889999999999999999999 8899999999999887765542 14799999999999999999999
Q ss_pred EEeCchHHHHHhcCCc-----ccccccccccCCccCCCCCccCCCCC--CC---cHHHHHHHHHhChh-hHHHHHHHHHH
Q 041829 313 WVKDRNTLIQSLSTNP-----EFLKNKASQANMVVDYKDWQIPLGRR--FR---SLKLWMVLRLYGLE-NLQGYIRNHIQ 381 (486)
Q Consensus 313 ~~r~~~~~~~~~~~~~-----~yl~~~~~~~~~~~~~~~~~~~~sr~--~~---~l~~~~~l~~~g~~-g~~~~~~~~~~ 381 (486)
+++++. +.+.-.... .|+.-... ........+.+.. .. ...+..+++.+-.+ |++++.+++.+
T Consensus 206 ~v~~~~-~~~~~p~~~~~~~~~~~~~~~~-----~~~~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gG~e~i~~r~~~ 279 (378)
T PRK03080 206 ILSPRA-VERLESYTPARPIPKFFRLTKG-----GKAIENSFKGQTINTPSMLTVEDYLDQLDWANSIGGLDALIARTAA 279 (378)
T ss_pred EECHHH-HHhhhcccCCCCCchhheeccc-----hHHhhhhhcCCcccCchHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 999753 332211111 12110000 0000001112211 11 12345678877676 89999999999
Q ss_pred HHHHHHHHHhcCCCeEEecC-C--Cc-eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecC
Q 041829 382 LAKHFEGLVAQDLRFEVVTP-R--IF-SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGA 457 (486)
Q Consensus 382 ~a~~l~~~l~~~~~~~~~~~-~--~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~ 457 (486)
+++++++.|+++++++++.+ + .. .+++|++... ......++...+.+++.+...+......+++|+++ +
T Consensus 280 l~~~l~~~l~~~~~~~~~~~~~~~~s~~i~~~~~~~~------~~~~~~~~~~~l~~~~i~v~~g~~~~~~~~vRis~-~ 352 (378)
T PRK03080 280 NASVLYDWAEKTPWATPLVADPATRSNTSVTLDFVDA------QAAVDAAAVAKLLRENGAVDIEPYRDAPNGLRIWC-G 352 (378)
T ss_pred HHHHHHHHHHhCCCcccccCCccccCccEEEEEcCCc------hHHHHHHHHHHHHHcCCeeccccccCCCCcEEEec-C
Confidence 99999999999987877642 2 22 4778876420 00122345566666664332221111235899998 8
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 458 PLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 458 ~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.++|++||++++++|+++.+++.+
T Consensus 353 ~~~t~~di~~l~~al~~~~~~~~~ 376 (378)
T PRK03080 353 PTVEPADVEALTPWLDWAFERLKA 376 (378)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999998776654
No 60
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.92 E-value=2.7e-23 Score=205.29 Aligned_cols=295 Identities=16% Similarity=0.110 Sum_probs=195.6
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH---HHHH
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK---ACQI 194 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~---a~~~ 194 (486)
.+++.+++++++| +. ..++++|||+++..++.+... +++.|+++...|+++.. .++.
T Consensus 34 ~~~l~~~~a~~~g-~~--------~~~~~~~gt~a~~~~~~~l~~-----------~gd~v~~~~~~~~~~~~~~~~~~~ 93 (338)
T cd06502 34 TAKLEARAAELFG-KE--------AALFVPSGTAANQLALAAHTQ-----------PGGSVICHETAHIYTDEAGAPEFL 93 (338)
T ss_pred HHHHHHHHHHHhC-CC--------eEEEecCchHHHHHHHHHhcC-----------CCCeEEEecCcceeeecCCcHHHH
Confidence 4444456999999 44 489999999998887765432 67788899999988664 3556
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC-CCccEEEEEecCCccccc--cCChHHHHHHHHHhCCEEEeecc
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI-GLIPFFLCATVGTTSSTA--VDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~-g~~p~~vv~~~~~t~tG~--id~l~~I~~ia~~~g~~lhvD~A 271 (486)
.|+ +++.+|.+. +.+|+++|++++++..+. ..++.+|+++.++|+.|. .+++++|+++|+++|+++|+|+|
T Consensus 94 ~g~---~~~~v~~~~---~~~d~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~g~~~~~~~l~~i~~~~~~~~~~livDea 167 (338)
T cd06502 94 SGV---KLLPVPGEN---GKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTEGGTVYPLDELKAISALAKENGLPLHLDGA 167 (338)
T ss_pred cCc---eEEeecCCC---CcCCHHHHHHHhhccCCCcCCcceEEEEEeecCCccccCHHHHHHHHHHHHHcCCeEeechH
Confidence 788 899998753 589999999999753211 123567888888876442 46788999999999999999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPL 351 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (486)
|..+....... .......++|+++.++||+++.|. |.+++.+++.+.........+ ..
T Consensus 168 ~~~~~~~~~~~-~~~~~~~~~d~~~~s~sK~~~~~~--g~~~~~~~~~~~~~~~~~~~~-------------------~~ 225 (338)
T cd06502 168 RLANAAAALGV-ALKTYKSGVDSVSFCLSKGGGAPV--GAVVVGNRDFIARARRRRKQA-------------------GG 225 (338)
T ss_pred HHHHHHHhcCC-CHHHHHhcCCEEEEeccccCCCcc--ceEEECCHHHHHHHHHHHHHh-------------------CC
Confidence 85432211110 111111368999999999999875 445555554433221111111 00
Q ss_pred CCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHH
Q 041829 352 GRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDD 431 (486)
Q Consensus 352 sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 431 (486)
+.+..++..++++..+...++.+++++..++++++.+.|+++ ++.+ .++..+++++++.. ......++.++
T Consensus 226 ~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~-~~~~~~~~~v~~~~-------~~~~~~~l~~~ 296 (338)
T cd06502 226 GMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEALEEL-GGLE-SEVQTNIVLLDPVE-------ANAVFVELSKE 296 (338)
T ss_pred ChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhc-CCCc-ccccCCeEEEecCC-------ccHHHHHHHHH
Confidence 111223344555555555567778889999999999999998 5543 35677888887642 12233444444
Q ss_pred HH---ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 432 IN---STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 432 l~---~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
+. +.| +.+.+. .. .++|+++ +..+|++|++++++++++
T Consensus 297 l~~~~~~g-i~~~~~--~~-~~lRi~~-~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 297 AIERRGEG-VLFYAW--GE-GGVRFVT-HWDTTEEDVDELLSALKA 337 (338)
T ss_pred HHHhhhCC-EEEEec--CC-CeEEEEe-ecCCCHHHHHHHHHHHhc
Confidence 43 456 444332 22 6899999 888899999999999864
No 61
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.2e-23 Score=195.05 Aligned_cols=306 Identities=17% Similarity=0.162 Sum_probs=204.3
Q ss_pred cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecC
Q 041829 103 IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASD 182 (486)
Q Consensus 103 ~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 182 (486)
.....|..+|....+|+. +++++|. .. ++|+.|||+||..+|.+..+ ++..|++.+
T Consensus 26 ~~~~~YG~D~~~~~~e~~----~ae~~g~-~a--------~~Fv~sGT~aN~lal~~~~~-----------~~~~vi~~~ 81 (342)
T COG2008 26 VGDDVYGEDPTTNALEQR----IAELFGK-EA--------ALFVPSGTQANQLALAAHCQ-----------PGESVICHE 81 (342)
T ss_pred cCCCCCCCCHHHHHHHHH----HHHHhCC-ce--------EEEecCccHHHHHHHHHhcC-----------CCCeEEEec
Confidence 344678888888888888 9999998 43 89999999999999988764 777899999
Q ss_pred CCchhHHHH--HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH-hCCCccEEEEEecCCccccccCC---hHHHH
Q 041829 183 QTHSALQKA--CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL-TIGLIPFFLCATVGTTSSTAVDP---LLALG 256 (486)
Q Consensus 183 ~~H~s~~~a--~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~-~~g~~p~~vv~~~~~t~tG~id~---l~~I~ 256 (486)
.+|...+++ ...++- +.+++++++.++.|++++++++|+.+- -....|.++..+..+ ..|.+-| |++|.
T Consensus 82 ~aHi~~~E~Ga~~~~~~----~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~~~~~~e~~~t-e~GtVy~l~el~~i~ 156 (342)
T COG2008 82 TAHIYTDECGAPEFFGG----GQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPTPLAVLENTAT-EGGTVYPLDELEAIS 156 (342)
T ss_pred cccceecccCcHHHHcC----CceeccCCCCCCCcCHHHHHHhhcCCCcccCCCceEEEeeccC-CCceecCHHHHHHHH
Confidence 999888874 444442 234555554467999999999988632 223456666666555 7799865 56777
Q ss_pred HHHHHhCCEEEeeccccchhcc--CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccccccc
Q 041829 257 NIAKSNGMWFHVDAAYAGSACI--CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNK 334 (486)
Q Consensus 257 ~ia~~~g~~lhvD~A~g~~~~~--~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~ 334 (486)
++||++|+.||+|||--+..+. .+..... ..++|++++.+.|.++.| .|.+++-+.+...+. .|....
T Consensus 157 ~~~k~~~l~LHmDGAR~~nA~valg~~~~~~---~~~~D~v~~~~tK~g~~~--~gAiv~gn~~~~~~a-----~~~rK~ 226 (342)
T COG2008 157 AVCKEHGLPLHMDGARLANALVALGVALKTI---KSYVDSVSFCLTKGGGAP--VGAIVFGNRDFAKRA-----RRWRKR 226 (342)
T ss_pred HHHHHhCCceeechHHHHHHHHHcCCCHHHH---HhhCCEEEEecccCCcce--eeeEEEcCHHHHHHH-----HHHHHH
Confidence 7899999999999984333222 1211111 237999999999999988 466666666544332 222111
Q ss_pred ccccCCccCCCCCccCCCCCCCcH-HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecC
Q 041829 335 ASQANMVVDYKDWQIPLGRRFRSL-KLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLP 413 (486)
Q Consensus 335 ~~~~~~~~~~~~~~~~~sr~~~~l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~ 413 (486)
.. ++-|..+.+ +.|. -.+...-.....++..++|++|.+.+.+.||+++..+++.|+|.++++.
T Consensus 227 ~G-------------gl~~k~r~laA~~~--~~l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~ 291 (342)
T COG2008 227 AG-------------GLMRKARFLAAQGL--YALEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPE 291 (342)
T ss_pred hc-------------ccHhhhhHHHHHHH--HHHhccHHHHHHHHHHHHHHHHHHhhhhcCCceeccCCcccEEEEECCh
Confidence 10 011111111 1121 1222333455556666789999999999899999988899999888752
Q ss_pred CCCCcccchHHHHHHHHHHHccCcEEEEeeeECCE-eEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 414 PHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGK-YILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 414 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~-~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
...+.+...|..+..+-..... ..+|++. ++.+|++||++++..++++.
T Consensus 292 -------------~~i~~l~~~~~~~~~~~~~~~~~~~vRfvt-s~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 292 -------------SAIEALRLAGALFYRGVLIGAHGEIVRFVT-SWATSEEDVDELVAAIKALL 341 (342)
T ss_pred -------------HHHHHHHhhchhheeeeeccCCCceEEEEe-eccCCHHHHHHHHHHHHHhh
Confidence 1124444444332221111111 4799998 99999999999999998764
No 62
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.92 E-value=5.2e-22 Score=196.96 Aligned_cols=335 Identities=13% Similarity=0.050 Sum_probs=213.7
Q ss_pred CCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHH
Q 041829 74 WQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAV 153 (486)
Q Consensus 74 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~ 153 (486)
+.+..|+|.- .++.....+.+.+..+.++.+ .+....+......++.+.+++++|.+. .+++++||+++
T Consensus 6 ~~~~~~~~~~-~~~~v~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~---------~iv~~sg~~a~ 74 (349)
T cd06454 6 FCSNDYLGLA-NHPEVIEAAKEALDKYGVGAG-GSRLISGTSDLHEELEEELAEFHGKEA---------ALVFSSGYAAN 74 (349)
T ss_pred cccCCccccC-CCHHHHHHHHHHHHHhCCCCC-CcCeecCCchHHHHHHHHHHHHhCCCC---------EEEeccHHHHH
Confidence 3455577763 223444455555544322211 111111234444555566899998753 57777888888
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCc
Q 041829 154 LVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLI 233 (486)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~ 233 (486)
..++.+... +++.|+++...|+++..+++..|+ +++.++ .+|++.+++++++.. +..+
T Consensus 75 ~~~~~~~~~-----------~gd~Vl~~~~~~~~~~~~~~~~g~---~~~~~~-------~~~~~~le~~i~~~~-~~~~ 132 (349)
T cd06454 75 DGVLSTLAG-----------KGDLIISDSLNHASIIDGIRLSGA---KKRIFK-------HNDMEDLEKLLREAR-RPYG 132 (349)
T ss_pred HHHHHHhcC-----------CCCEEEEehhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHHHhh-ccCC
Confidence 877655442 677888999999999999999998 887775 358889999987643 1234
Q ss_pred cEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchh--ccc-CCcCCCceeeecccccCCCCcce
Q 041829 234 PFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQ--YID-GVEEADSFNMNAHKWFLTNFDCS 310 (486)
Q Consensus 234 p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~--~~~-~~~~aDs~~~~~hK~l~~p~~~g 310 (486)
+.+|+++.+++++|.+.|+++|+++|+++|+++++|++|+.+... +.... ... ...+.|+++.++||+++.+ + |
T Consensus 133 ~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~livD~a~~~g~~~-~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~-g-G 209 (349)
T cd06454 133 KKLIVTEGVYSMDGDIAPLPELVDLAKKYGAILFVDEAHSVGVYG-PHGRGVEEFGGLTDDVDIIMGTLGKAFGAV-G-G 209 (349)
T ss_pred CeEEEEeccccCCCCccCHHHHHHHHHHcCCEEEEEccccccccC-CCCCChhhhccccccCcEEEeechhhhccc-C-C
Confidence 678888889999999999999999999999999999999743321 11000 011 1236799999999999864 3 5
Q ss_pred EEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH
Q 041829 311 ALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGL 389 (486)
Q Consensus 311 ~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~ 389 (486)
+++.+ +..+........+|.. ..+.. .....+..+++..-. +++..++..++++++.+.
T Consensus 210 ~i~~~-~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~a~~~~l~~~~~--~~~~~~~~~~~~~~l~~~ 269 (349)
T cd06454 210 YIAGS-KELIDYLRSYARGFIF-----------------STSLPPAVAAAALAALEVLQG--GPERRERLQENVRYLRRG 269 (349)
T ss_pred EEECC-HHHHHHHHHhchhhhc-----------------cCCCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHH
Confidence 55544 4433322111111110 01111 112234445554422 456778889999999999
Q ss_pred HhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHH
Q 041829 390 VAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHV 465 (486)
Q Consensus 390 l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di 465 (486)
|+++ ++++..++...++++...+ .....++.+.|.++|. ++.+... .+..++|+++ +.+++++|+
T Consensus 270 l~~~-g~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~L~~~gI-~~~~~~~~~~~~~~~~iRi~~-~~~~~~~~i 338 (349)
T cd06454 270 LKEL-GFPVGGSPSHIIPPLIGDD--------PAKAVAFSDALLERGI-YVQAIRYPTVPRGTARLRISL-SAAHTKEDI 338 (349)
T ss_pred HHhc-CCcccCCCCCcEEEEeCCC--------hHHHHHHHHHHHhCCc-eEEEecCCccCCCCCeEEEEE-eCCCCHHHH
Confidence 9987 7877655444444444321 1234678888888874 4443221 1236899999 788899999
Q ss_pred HHHHHHHHHH
Q 041829 466 NAAWEVMQDK 475 (486)
Q Consensus 466 ~~~~~~l~~~ 475 (486)
++++++|+++
T Consensus 339 ~~~~~~l~~~ 348 (349)
T cd06454 339 DRLLEALKEV 348 (349)
T ss_pred HHHHHHHHHh
Confidence 9999999875
No 63
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.92 E-value=2.9e-22 Score=199.34 Aligned_cols=338 Identities=13% Similarity=0.098 Sum_probs=238.2
Q ss_pred CHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 88 SVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
..|..+.+.+...++.....|....+..++.+.+.+++.+.+|.+.+- ..+.++|+|+++|+..++.+..+
T Consensus 41 ~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~~~~~~~----~~eiivt~Ga~~al~~~~~a~~~----- 111 (393)
T COG0436 41 PTPEHIIEAAIEALEEGGTHYTPSAGIPELREAIAEKYKRRYGLDVDP----EEEIIVTAGAKEALFLAFLALLN----- 111 (393)
T ss_pred CCCHHHHHHHHHHHhcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCCHHHHHHHHHHHhcC-----
Confidence 445555555555555443256678899999999999999999854321 12499999999999999887766
Q ss_pred hCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC-CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 168 VGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS-TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~-~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|+++++.+.++.....++|. +++.+|++.. .+|.+|++.|++++++++ .+|+++.|+|||
T Consensus 112 ------pGDeVlip~P~Y~~y~~~~~~~gg---~~v~v~l~~~~~~f~~d~~~l~~~i~~kt------k~i~ln~P~NPT 176 (393)
T COG0436 112 ------PGDEVLIPDPGYPSYEAAVKLAGG---KPVPVPLDEEENGFKPDLEDLEAAITPKT------KAIILNSPNNPT 176 (393)
T ss_pred ------CCCEEEEeCCCCcCHHHHHHhcCC---EEEEEeCCcCccCCcCCHHHHHhhcCccc------eEEEEeCCCCCc
Confidence 788899999999999999999999 9999998654 369999999999998854 489999999999
Q ss_pred cccC---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC-ceee-ecccccCCC-CcceEEEEeCchH
Q 041829 247 TAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD-SFNM-NAHKWFLTN-FDCSALWVKDRNT 319 (486)
Q Consensus 247 G~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD-s~~~-~~hK~l~~p-~~~g~l~~r~~~~ 319 (486)
|.+- .+++|+++|++||+|++.|.+|.........+..... +.. .| .+++ +..|.++.+ .-+|+++..++..
T Consensus 177 Gav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~~s~~~-~~~~~~~~i~i~s~SK~~~mtGwRvG~~v~~~~~l 255 (393)
T COG0436 177 GAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILE-LAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred CcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCcCCHhh-cCCCcceEEEEecccccccccccceeEeecChHHH
Confidence 9994 4889999999999999999999886653211222221 112 12 4444 578988755 4588888775443
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
.. .+..-..|+. .|...+...++-.+|+.-. .+.++++.+...++++.+.+.|.+++|+++
T Consensus 256 ~~-~~~~~~~~~~-----------------~~~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rrd~l~~~l~~~~g~~~ 317 (393)
T COG0436 256 IA-ALRKLKSYLT-----------------SCAPTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSV 317 (393)
T ss_pred HH-HHHHHHHhcc-----------------cCCCHHHHHHHHHHhcCccchHHHHHHHHHHHHHHHHHHHHHHhcCCeee
Confidence 32 2221112211 1221122223333333211 245666778889999999999999989999
Q ss_pred ecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee-EC---CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 399 VTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV-LS---GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 399 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..+|...+..|--.+.. ....+++.+|.++.++.+.|+. +. |.+++|+++ .++.+++++.++.|.+
T Consensus 318 ~~~p~Ga~Y~~~~i~~~-------~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~---~~~~~~l~~a~~rl~~ 387 (393)
T COG0436 318 VKPPEGAFYLFPKIPEL-------LDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSL---ATSEETLEEALRRLAR 387 (393)
T ss_pred ccCCCeeEEEEeecCCC-------CCHHHHHHHHHHhCCEEEecccccCCCCCCCeEEEEE---ecCHHHHHHHHHHHHH
Confidence 87787777766544321 1225677777776656665553 32 457999999 3355899999999988
Q ss_pred HHHH
Q 041829 475 KASA 478 (486)
Q Consensus 475 ~~~~ 478 (486)
..+.
T Consensus 388 ~~~~ 391 (393)
T COG0436 388 FLAE 391 (393)
T ss_pred HHHh
Confidence 7654
No 64
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.91 E-value=5.4e-22 Score=193.28 Aligned_cols=336 Identities=17% Similarity=0.144 Sum_probs=237.9
Q ss_pred CCcCCCCcccccCCCCCCHHHHHHHHHHHh-cCcCc--cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcC
Q 041829 71 VTHWQSPNYFAYYPSNSSVAGFLGEMLSAG-LNIVG--FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQG 147 (486)
Q Consensus 71 ~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~--~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ 147 (486)
...+.+-.|+|.-.. +.....+.+.+..+ ....+ ......+...+||++ +|+++|.+. .++.+
T Consensus 41 ~~nf~SNdYLGLa~~-~~~~~a~~~~~~~~g~g~~gsR~i~G~~~~h~~LE~~----lA~f~g~e~---------al~f~ 106 (388)
T COG0156 41 VLNFCSNDYLGLASH-PELIEAAKAAIRRYGVGAGGSRLISGTSDLHVELEEE----LADFLGAEA---------ALLFS 106 (388)
T ss_pred eEeeeccCcccccCC-HHHHHHHHHHHHHhCCCCCCcCcccCCcHHHHHHHHH----HHHHhCCCc---------EEEEc
Confidence 345667779988422 23334444444442 22111 223455677788888 999999876 57777
Q ss_pred chhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 148 TASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 148 ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
+|-.||+.++.+... ++++|+.++..|.|+..+++..+. +++..+ +.|+++||+.+++.
T Consensus 107 SGy~AN~~~i~~l~~-----------~~dli~~D~lnHASiidG~rls~a---~~~~f~-------HnD~~~Le~~l~~~ 165 (388)
T COG0156 107 SGFVANLGLLSALLK-----------KGDLIFSDELNHASIIDGIRLSRA---EVRRFK-------HNDLDHLEALLEEA 165 (388)
T ss_pred ccchhHHHHHHHhcC-----------CCcEEEEechhhhhHHHHHHhCCC---cEEEec-------CCCHHHHHHHHHhh
Confidence 789999887766544 688999999999999999999988 888776 46999999999986
Q ss_pred HhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhccc--CCc--CCCceeeeccccc
Q 041829 228 LTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYID--GVE--EADSFNMNAHKWF 303 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~--~~~--~aDs~~~~~hK~l 303 (486)
...+.++.+|++....++.|.+.||++|.++|++||+|+.||.||+.+.+ .+..+.... |+. ..|++..+.-|.+
T Consensus 166 ~~~~~~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~-G~~GrG~~e~~g~~~~~vdi~~gTlsKAl 244 (388)
T COG0156 166 RENGARRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVL-GPNGRGLAEHFGLEPEEVDIIVGTLGKAL 244 (388)
T ss_pred hccCCCceEEEEeccccCCCCcCCHHHHHHHHHHhCcEEEEEcccccccc-CCCCccHHHHhCCCCccceEEEEEchhhh
Confidence 54332567899999999999999999999999999999999999987654 333333221 332 4589999999999
Q ss_pred CCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHH
Q 041829 304 LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLA 383 (486)
Q Consensus 304 ~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 383 (486)
+ +.|.++..+............+|++.... .+..+.++-.+++.+- ...++.++..+++
T Consensus 245 G---s~Gg~v~g~~~~~d~L~~~ar~~ifStal----------------pP~~aaa~~~al~~l~--~~~~~r~~L~~~~ 303 (388)
T COG0156 245 G---SSGGYIAGSAALIDYLRNRARPFIFSTAL----------------PPAVAAAALAALRILE--EGPERRERLQELA 303 (388)
T ss_pred c---ccCceeeCcHHHHHHHHHhCCceeccCCC----------------CHHHHHHHHHHHHHHH--hCHHHHHHHHHHH
Confidence 8 35666666655443333445677765321 0122233444555442 3356778888899
Q ss_pred HHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEE----eeeECCEeEEEEEecCCC
Q 041829 384 KHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFIS----HTVLSGKYILRFAVGAPL 459 (486)
Q Consensus 384 ~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~----~~~~~~~~~lRi~~~~~~ 459 (486)
.+++..++.. ++.+ .+...+++.+.+.. +....++...|.++| +++. |+..+|...+|+++ +..
T Consensus 304 ~~~~~~~~~~-~~~~-~~s~s~I~pv~~gd--------~~~a~~~s~~l~~~G-i~v~~i~~PTVp~gtarlRi~l-ta~ 371 (388)
T COG0156 304 AFFRSLLKAL-GLVL-LPSESPIIPVILGD--------EERALEASRALLEEG-IYVSAIRPPTVPKGTARLRITL-TAA 371 (388)
T ss_pred HHHHHHHHhc-CCcc-CCCCCCeeeeEeCC--------HHHHHHHHHHHHHCC-eeEeeecCCCCCCCcceEEEEe-cCC
Confidence 9999666665 6655 35667788777753 345577778888886 5443 55667888999999 888
Q ss_pred CCHHHHHHHHHHHHHH
Q 041829 460 TEWRHVNAAWEVMQDK 475 (486)
Q Consensus 460 ~t~~di~~~~~~l~~~ 475 (486)
.|++||+++++++.++
T Consensus 372 ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 372 HTEEDIDRLAEALSEV 387 (388)
T ss_pred CCHHHHHHHHHHHHhh
Confidence 9999999999999875
No 65
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.91 E-value=5.3e-22 Score=199.72 Aligned_cols=330 Identities=11% Similarity=0.090 Sum_probs=219.0
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+...+......|...++..++++++.+++.+.+|.+.+ ....++|+|+++++..++.+...
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 115 (391)
T PRK08361 48 PKNIKEAAKRALDEGWTHYTPNAGIPELREAIAEYYKKFYGVDVD-----VDNVIVTAGAYEATYLAFESLLE------- 115 (391)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cccEEEeCChHHHHHHHHHHhcC-------
Confidence 345555555555443344655677889999999999888775332 12689999999998877665432
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|++++.+|.++...++..|+ +++.+|++.+++|.+|+++|++++++. +.+|+++.++|+||.+
T Consensus 116 ----~g~~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~i~~~------~~~v~i~~p~NPtG~~ 182 (391)
T PRK08361 116 ----EGDEVIIPDPAFVCYVEDAKIAEA---KPIRIPLREENEFQPDPDELLELITKR------TRMIVINYPNNPTGAT 182 (391)
T ss_pred ----CCCEEEEcCCCCcccHHHHHHcCC---EEEEEecCCccCCCCCHHHHHHhcccc------cEEEEEeCCCCCCCcC
Confidence 677888999999999999999999 999999987656889999999988754 3477888999999999
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhc
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLS 325 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~ 325 (486)
-| +++|+++|+++++++++|++|+.+.................+.++.+++|.++.| ..+|+++..+ ..+.....
T Consensus 183 ~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~GlRiG~~~~~~-~~~~~~~~ 261 (391)
T PRK08361 183 LDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKHYPMIKYAPDNTILANSFSKTFAMTGWRLGFVIAPE-QVIKDMIK 261 (391)
T ss_pred cCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCCCCHhhcCCCCEEEEecCchhcCCcHhhhhhhccCH-HHHHHHHH
Confidence 88 8899999999999999999997654321111111111112456788999988765 2278888743 33332211
Q ss_pred CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--Ch--hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 326 TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GL--ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~--~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
...+... ....+...++...+ +. +.+++..++..++.+.+.+.|++++++++. +
T Consensus 262 -~~~~~~~--------------------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~~-~ 319 (391)
T PRK08361 262 -LHAYIIG--------------------NVASFVQIAGIEALRSKESWKAVEEMRKEYNERRKLVLKRLKEMPHIKVF-E 319 (391)
T ss_pred -HHhhhcc--------------------CCChHHHHHHHHHhcCCcccHHHHHHHHHHHHHHHHHHHHHHhCCCCeec-C
Confidence 1111100 00112223333332 21 356777778888899999999998888765 4
Q ss_pred CCceEEE-EEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 402 RIFSLVC-FRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 402 ~~~~~v~-f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
|..+.++ .++.+.. .+ ..++.+.+.+ .| +.+.+. .+ .+..++|++++ .++++++..++.|+++.
T Consensus 320 p~g~~~~~~~l~~~~-----~~--~~~l~~~l~~~~g-v~v~pg~~f~~~~~~~iRi~~~---~~~~~l~~al~~l~~~l 388 (391)
T PRK08361 320 PKGAFYVFANIDETG-----MS--SEDFAEWLLEKAR-VVVIPGTAFGKAGEGYIRISYA---TSKEKLIEAMERMEKAL 388 (391)
T ss_pred CCEEEEEEEECCCCC-----CC--HHHHHHHHHHhCC-EEEcCchhhCCCCCCEEEEEec---CCHHHHHHHHHHHHHHH
Confidence 5545444 3554211 11 2456666665 45 555443 23 23469999993 26778888888888776
Q ss_pred HH
Q 041829 477 SA 478 (486)
Q Consensus 477 ~~ 478 (486)
++
T Consensus 389 ~~ 390 (391)
T PRK08361 389 EE 390 (391)
T ss_pred hc
Confidence 53
No 66
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.91 E-value=4.5e-22 Score=215.12 Aligned_cols=363 Identities=17% Similarity=0.122 Sum_probs=234.1
Q ss_pred ChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccc--cCCCCCCHHHHH-------HHHHHHhcCcC
Q 041829 34 QPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFA--YYPSNSSVAGFL-------GEMLSAGLNIV 104 (486)
Q Consensus 34 ~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~-------~~~l~~~~n~~ 104 (486)
-|+.++..-+..+|+ +.++.++++ ++.+...+|.. ...|.| |++. ..|.++ .+|+++ +.++
T Consensus 42 iP~~i~~~~~l~lp~-~~sE~e~~~---~~~~la~~N~~---~~~~ig~G~y~~--~~P~vi~~~i~~~~~~~t~-ytPy 111 (954)
T PRK05367 42 VPASIRLAEPLDLPA-ALSEAEALA---ELRAIASKNKV---FRSYIGQGYYGT--HTPPVILRNILENPAWYTA-YTPY 111 (954)
T ss_pred CCHHHhcCCCCCCCC-CCCHHHHHH---HHHHHHhcCCC---CCcccCCCCCCC--cCcHHHHHHHHhCcchhhc-cCCC
Confidence 356666555667775 579999999 88887777754 234554 3322 222222 234554 3444
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
+....+|.....+|.+ .++++|+|++.+ +..++.++|.+...+++ ++... +. ++..|++++..
T Consensus 112 Q~EisQG~Leal~~~Q--t~la~LtG~~~a-------naSl~d~aTAa~ea~~~-a~~~~-~~------~~~~vlv~~~~ 174 (954)
T PRK05367 112 QPEISQGRLEALLNFQ--TMVADLTGLEIA-------NASLLDEATAAAEAMAL-AKRVS-KS------KSNRFFVDDDV 174 (954)
T ss_pred ChHHHHHHHHHHHHHH--HHHHHHHCCChh-------hccccccHHHHHHHHHH-hhhhc-cC------CCCEEEEcCcc
Confidence 4444455666666666 459999999985 67888888876554433 33221 00 13689999999
Q ss_pred chhHHHH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHH
Q 041829 185 HSALQKA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAK 260 (486)
Q Consensus 185 H~s~~~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~ 260 (486)
|++...+ ++..|+ +++.+|.+.+ ++ .++ .+.+ +...++.+|.+.|+++|+++||
T Consensus 175 hP~~~~v~~t~a~~~G~---ev~~~~~~~d----~~--------~~~------~~~v-lvq~p~~~G~i~d~~~i~~~ah 232 (954)
T PRK05367 175 HPQTLDVLRTRAEPLGI---EVVVGDAAKA----LD--------HDD------VFGV-LLQYPGTSGEVRDYTALIAAAH 232 (954)
T ss_pred CHHHHHHHHHHHHhCCC---EEEEecCccC----CC--------ccc------EEEE-EEecCCCCeeeccHHHHHHHHH
Confidence 9997754 456788 9999987531 11 111 2334 4444678999999999999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCceeeeccccc-----CCCCcceEEEEeCchHHHHHhcCCcccccccc
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWF-----LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l-----~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
++|++++||+.+.+..+..+ .... ++|+++.++|||+ ++| ++|++++|+. +.+.+ ++-+..-.
T Consensus 233 ~~Gal~~vda~~~Al~~l~~-pge~-----GaDi~vgs~qkfg~P~g~GGP-~aGflavr~~--~~r~l---pgrivG~s 300 (954)
T PRK05367 233 ARGALVAVAADLLALTLLTP-PGEM-----GADIAVGSAQRFGVPMGFGGP-HAAYFAVRDA--YKRSM---PGRIVGVS 300 (954)
T ss_pred HcCCEEEEEehhhhccCCCC-hhhc-----CCCEEEeeCcccCCCCCCCCC-CEEEEEECHH--HHhhC---CCCeeeee
Confidence 99999999996644333322 1222 8999999999994 444 4999999974 22222 22222211
Q ss_pred cccCCccCCC--CCccC-CCCCC-------Cc-----HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 336 SQANMVVDYK--DWQIP-LGRRF-------RS-----LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 336 ~~~~~~~~~~--~~~~~-~sr~~-------~~-----l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
.+..+...+. -.+.+ .-|+- .+ +.+++.+.++|.+|++++.++...+++++++.|++ +|+++..
T Consensus 301 ~d~~g~~~~~lalqtReqhiRrekaTsNict~qaL~a~~a~~y~~~~g~~Gl~~Ia~~~~~la~~l~~~L~~-~G~~~~~ 379 (954)
T PRK05367 301 VDAAGNPALRLALQTREQHIRREKATSNICTAQVLLAVMASMYAVYHGPEGLKAIARRVHRLAAILAAGLRA-LGLEVVH 379 (954)
T ss_pred cccCCCcccccccccccccccccccccccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh-cCcccCC
Confidence 1111111110 00111 11221 11 22333346689999999999999999999999988 5999887
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
++.+..+++++.. ...++.++|.++|... .. . ....+|+|+ +.++|++||++++++|.
T Consensus 380 ~~~f~~~~~~~~~----------~~~~i~~~l~~~gi~~-~~--~-~~~~l~is~-~e~~t~~did~l~~~l~ 437 (954)
T PRK05367 380 DSFFDTLTVEVGG----------DAAAVLARALAAGINL-RR--V-DDDHVGISL-DETTTREDLAALLAVFG 437 (954)
T ss_pred CCCCCeEEEeCCC----------CHHHHHHHHHHCCcee-cc--c-cCCEEEEEe-cccCCHHHHHHHHHHHc
Confidence 7778888888631 1256778888888433 21 1 124699999 99999999999999996
No 67
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.91 E-value=8.3e-22 Score=195.36 Aligned_cols=318 Identities=16% Similarity=0.098 Sum_probs=212.4
Q ss_pred HhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEE
Q 041829 99 AGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVV 178 (486)
Q Consensus 99 ~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v 178 (486)
...+.+...|...++..++++++.+++...+|.+.. ....++++|||+++..++.+... ++++|
T Consensus 23 ~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~-----~~~~~~~~~~t~a~~~~~~~~~~-----------~g~~v 86 (350)
T cd00609 23 AALRAGLLGYYPDPGLPELREAIAEWLGRRGGVDVP-----PEEIVVTNGAQEALSLLLRALLN-----------PGDEV 86 (350)
T ss_pred HhhccCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhCC-----------CCCEE
Confidence 345555566777888999999999999988875322 13588999999888777765533 56789
Q ss_pred EecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCH--HHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHH
Q 041829 179 YASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSP--DSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALG 256 (486)
Q Consensus 179 ~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~--~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~ 256 (486)
+++...|.++..+++..|. +++.+|++.++ .++. +.+++.+.+ .+.+|+++.+++++|.+.|++++.
T Consensus 87 l~~~~~~~~~~~~~~~~~~---~~~~i~~~~~~--~~~~~~~~~~~~~~~------~~~~v~i~~~~~~tG~~~~~~~l~ 155 (350)
T cd00609 87 LVPDPTYPGYEAAARLAGA---EVVPVPLDEEG--GFLLDLELLEAAKTP------KTKLLYLNNPNNPTGAVLSEEELE 155 (350)
T ss_pred EEcCCCchhHHHHHHHCCC---EEEEEeccccc--CCccCHHHHHhhcCc------cceEEEEECCCCCCCcccCHHHHH
Confidence 9999999999999999999 99999998654 4444 555544332 356888888999999999866555
Q ss_pred ---HHHHHhCCEEEeeccccchhccCccchh-cccCCcCCCceeeecccccC-CCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 257 ---NIAKSNGMWFHVDAAYAGSACICPEYRQ-YIDGVEEADSFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 257 ---~ia~~~g~~lhvD~A~g~~~~~~~~~~~-~~~~~~~aDs~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
++|+++|+++|+|+||+++......... ...+....|.+..+.||+++ .+.++|++++++..... .+.....+.
T Consensus 156 ~l~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~K~~~~~g~~~G~i~~~~~~~~~-~~~~~~~~~ 234 (350)
T cd00609 156 ELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLE-RLKKLLPYT 234 (350)
T ss_pred HHHHHHHhCCeEEEEecchhhceeCCcccccccCcCccCcEEEEeecccccCCcccceEEEecCHHHHHH-HHHHHHHhc
Confidence 8999999999999999876543211100 11122357888899999998 45568888887644332 222111111
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEe
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRL 411 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~ 411 (486)
. ..........++.+++... ++++++.++..++++++.+.|++.+...+..++....+++++
T Consensus 235 ~-----------------~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~g~~~~~~~ 296 (350)
T cd00609 235 T-----------------SGPSTLSQAAAAAALDDGE-EHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDL 296 (350)
T ss_pred c-----------------cCCChHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCccEEEEEec
Confidence 0 0111112234444444332 678888899999999999999998655433344445556665
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
... .....+.+.+.+.|........+. +..++|+++..+ ++|+++++++|+
T Consensus 297 ~~~--------~~~~~~~~~l~~~gi~i~~~~~~~~~~~~~iRi~~~~~---~~~i~~~~~al~ 349 (350)
T cd00609 297 PEG--------DDEEFLERLLLEAGVVVRPGSAFGEGGEGFVRLSFATP---EEELEEALERLA 349 (350)
T ss_pred CCC--------ChHHHHHHHHHhCCEEEecccccccCCCCeEEEEeeCC---HHHHHHHHHHhh
Confidence 431 111334455555574333333332 567999999433 999999999986
No 68
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.90 E-value=5.7e-22 Score=200.47 Aligned_cols=338 Identities=14% Similarity=0.088 Sum_probs=210.6
Q ss_pred ccccCCCCCCHHHHHHHHHHHhcC-c------CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 79 YFAYYPSNSSVAGFLGEMLSAGLN-I------VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n-~------~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
++.+.++....+..+.+.+...+. . ....+...+...++|+.+.+++++++|.+.. .++++|||+
T Consensus 21 ~~~~~~~~~~~~~~v~~a~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~g~~~~--------~v~~~sgt~ 92 (402)
T cd00378 21 TLELIASENFTSPAVMEAMGSDLTNKYAEGYPGKRYYGGCEYVDEIEDLAIERAKKLFGAEYA--------NVQPHSGSQ 92 (402)
T ss_pred CeeeeccCCcCCHHHHHHhcccccccccCCCCCCcccCCchHHHHHHHHHHHHHHHHhCCCce--------eeecCCcHH
Confidence 555566655445555555544331 1 1222335566778888888999999998753 355556789
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH-----HHHhCCCCCCeEEEeCCCCC-CCccCHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA-----CQIGGIHPQNFRVLKTDSST-NYSLSPDSLAEAIS 225 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-----~~~~g~g~~~v~~v~~~~~~-~~~id~~~L~~~i~ 225 (486)
++..++.+... +++.|+++...|.+.... ++..|. +++.++++.+. ++.+|+++|+++++
T Consensus 93 a~~~~l~~l~~-----------~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~---~~~~~~~~~~~~~~~id~~~l~~~i~ 158 (402)
T cd00378 93 ANLAVYFALLE-----------PGDTIMGLDLSHGGHLTHGSFTKVSASGK---LFESVPYGVDPETGLIDYDALEKMAL 158 (402)
T ss_pred HHHHHHHHhcC-----------CCCEEEEecCccCccccccccccccccce---eEEEecCCcCcccCCcCHHHHHHHHH
Confidence 98877766533 677888888887654332 555676 77777776541 47999999999986
Q ss_pred HHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCC
Q 041829 226 RDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLT 305 (486)
Q Consensus 226 ~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~ 305 (486)
+.. |.+|+++.+ .+|...|+++|+++|+++|+++++|++|..+.......... +..+|+++.++||++.+
T Consensus 159 ~~~-----~~~v~~~~~--~~~~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~---~~~~dv~~~s~sK~l~G 228 (402)
T cd00378 159 EFK-----PKLIVAGAS--AYPRPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNP---LPGADVVTTTTHKTLRG 228 (402)
T ss_pred hCC-----CCEEEecCc--ccCCCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCc---ccCCcEEEeccccCCCC
Confidence 421 345665554 34677899999999999999999999975443322111111 12579899999999977
Q ss_pred CCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 041829 306 NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 306 p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~ 384 (486)
|. +|+++..++....+......++.. .+.. .....+..++...-..+++++.++..++++
T Consensus 229 ~~-gg~i~~~~~~~~~~l~~~~~~~~~------------------~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~ 289 (402)
T cd00378 229 PR-GGLILTRKGELAKKINSAVFPGLQ------------------GGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAK 289 (402)
T ss_pred CC-ceEEEeccHHHHHHHHHHhCcccc------------------CCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 65 455556553433322111111111 0001 111122233333323356778888999999
Q ss_pred HHHHHHhcCCCeEEec-CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEee----eE---CCEeEEEEEec
Q 041829 385 HFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT----VL---SGKYILRFAVG 456 (486)
Q Consensus 385 ~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~----~~---~~~~~lRi~~~ 456 (486)
++.+.|++. |++++. +...+.+.+++.+.+ .+ ..++.+.|.+.| +.+.+. .. .+..++|+++
T Consensus 290 ~l~~~L~~~-g~~~~~~~~~~~~v~v~~~~~~-----~~--~~~~~~~l~~~g-I~v~~~~~p~~~~~~~~~~~lRi~~- 359 (402)
T cd00378 290 ALAEALKER-GFKVVSGGTDNHLVLVDLRPKG-----IT--GKAAEDALEEAG-ITVNKNTLPWDPSSPFVPSGIRIGT- 359 (402)
T ss_pred HHHHHHHhC-CCeEeecCCCCeEEEEeCCccC-----CC--HHHHHHHHHHcC-cEEcCCcCCCCCCCCCCCCeeEecC-
Confidence 999999997 898864 344566666665322 11 134445555566 444321 11 1235899988
Q ss_pred CCC----CCHHHHHHHHHHHHHHHH
Q 041829 457 APL----TEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 457 ~~~----~t~~di~~~~~~l~~~~~ 477 (486)
+.. .+++||+.+++.|+++.+
T Consensus 360 ~~~~~~~~~~~di~~~~~~l~~~~~ 384 (402)
T cd00378 360 PAMTTRGMGEEEMEEIADFIARALK 384 (402)
T ss_pred HHHHHhCCCHHHHHHHHHHHHHHHh
Confidence 443 379999999999998764
No 69
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.9e-21 Score=195.38 Aligned_cols=329 Identities=15% Similarity=0.107 Sum_probs=217.6
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|....+..++.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+...
T Consensus 40 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~-----~~~i~~t~g~~~al~~~~~~l~~-------- 106 (382)
T PRK06108 40 DFIRDAAAAALADGETFYTHNLGIPELREALARYVSRLHGVATP-----PERIAVTSSGVQALMLAAQALVG-------- 106 (382)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCcC-----cceEEEeCChHHHHHHHHHHhcC--------
Confidence 44555555555444445766778899999999999999884321 12588999999988777665433
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC-CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS-TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~-~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..+|..+...++.+|+ +++.+|.+.+ ++|.+|+++|++.+++. +.+|+++.++|+||.+
T Consensus 107 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~i~l~~p~NPtG~~ 174 (382)
T PRK06108 107 ---PGDEVVAVTPLWPNLVAAPKILGA---RVVCVPLDFGGGGWTLDLDRLLAAITPR------TRALFINSPNNPTGWT 174 (382)
T ss_pred ---CCCEEEEeCCCccchHHHHHHCCC---EEEEeeCCCCCCCccCCHHHHHHhcCcc------ceEEEEECCCCCCCcc
Confidence 567788899999999999999999 9999999753 35789999999988543 3477888999999987
Q ss_pred C---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCC---cCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 250 D---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGV---EEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 250 d---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~---~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
- ++++|+++|+++|+|+++|++|+.+..........+..+ ..-..+..+++|.++.| ..+|+++.+. +.+.
T Consensus 175 ~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~~~~~~-~~~~- 252 (382)
T PRK06108 175 ASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPP-ALGQ- 252 (382)
T ss_pred cCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCCCCCCHhhcCCCcCCEEEEeechhhccCcccceeeeeCCH-HHHH-
Confidence 4 578899999999999999999987654201110111111 11235677899988644 5689988753 2222
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.+.....|.. .+........+..++. .+.+.++++.++..++.+++.+.|++++++++.. |
T Consensus 253 ~~~~~~~~~~-----------------~~~~~~~q~a~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~-p 313 (382)
T PRK06108 253 VLEKLIEYNT-----------------SCVAQFVQRAAVAALD-EGEDFVAELVARLRRSRDHLVDALRALPGVEVAK-P 313 (382)
T ss_pred HHHHHHHhcc-----------------cCCChHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHHHhCCCCcccC-C
Confidence 2211111110 0010111112222232 2455677888888999999999999888888764 4
Q ss_pred CceEE-EEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEe-eeE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 403 IFSLV-CFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISH-TVL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 403 ~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~-~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
..+++ .+++.+.. ...++.+.|.+ .| +.+.+ ..+ .+..++|+++ +. ++++++++++.|+++++
T Consensus 314 ~~g~~~~~~l~~~~--------~~~~~~~~ll~~~g-V~v~pg~~f~~~~~~~~Ris~-~~--~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 314 DGAMYAFFRIPGVT--------DSLALAKRLVDEAG-LGLAPGTAFGPGGEGFLRWCF-AR--DPARLDEAVERLRRFLA 381 (382)
T ss_pred CeeEEEEEeCCCCC--------CHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEe-cC--CHHHHHHHHHHHHHHHh
Confidence 44444 44554211 12456777654 46 55543 333 2356999999 43 88999999999987653
No 70
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.90 E-value=4e-21 Score=206.78 Aligned_cols=365 Identities=13% Similarity=0.057 Sum_probs=231.6
Q ss_pred hhhhhhcCCCCCCC--CCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHH-------HHHHHhcCcCc
Q 041829 35 PGYLHNLIPDSAPH--HPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLG-------EMLSAGLNIVG 105 (486)
Q Consensus 35 ~~~~~~~~~~~~p~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~ 105 (486)
|+.++.. +.++|+ .+.++.++++ ++.+....|.. +.+|.|.-+-+-..|..+- +++++ +.+++
T Consensus 68 P~~i~~~-~l~lp~~~~~~sE~e~~~---~~~~la~kN~~---~~~fiG~G~y~~~~P~~v~~~i~~~~~~~Ta-ytPYq 139 (993)
T PLN02414 68 PKSIRLD-SMKLSKYDEGLTESQMLE---HMKSLASKNKV---FKSYIGMGYYNTHVPPVILRNILENPGWYTQ-YTPYQ 139 (993)
T ss_pred CHHHhcC-CCCCCCCCCCCCHHHHHH---HHHHHHhcCCc---cccccCCCCCCccCCHHHHHHHHhChHHHhh-cCCCc
Confidence 4444332 456772 4789999999 88887777754 3445552211112333332 22333 23333
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
....++.....+|.+ ..+++|+|++.+ +..++.++|.+...++++.+.. .| ++.+|++++..|
T Consensus 140 aEisQG~lqal~~~Q--t~ia~LtG~~~a-------naSL~d~aTAaaea~~~a~~~~-------~g-~~~~VlVs~~~h 202 (993)
T PLN02414 140 AEIAQGRLESLLNYQ--TMITDLTGLPMS-------NASLLDEGTAAAEAMAMCNNIL-------KG-KKKKFLIASNCH 202 (993)
T ss_pred hHHHHHHHHHHHHHH--HHHHHHhCCChh-------hEeecCChHHHHHHHHHHHhcc-------cC-CCCEEEEcCccC
Confidence 222244444455555 559999999886 6899999987765444433221 00 346799999999
Q ss_pred hhHHHHHH----HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 186 SALQKACQ----IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 186 ~s~~~a~~----~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
++...+++ ..|+ +++.+|.+.. + ...++ .+ .++++-++.+|.+.|+++|+++||+
T Consensus 203 P~~~~v~~t~a~~~Gi---eV~~v~~~~~-----~------~~~~~------v~-~vlvq~P~~~G~v~dv~~I~~~ah~ 261 (993)
T PLN02414 203 PQTIDVCQTRADGLGL---EVVVADEKDF-----D------YSSGD------VC-GVLVQYPATDGEVLDYAEFVKNAHA 261 (993)
T ss_pred HhHHHHHHHhhhhcCC---EEEEecchhh-----c------cccCc------eE-EEEEecCCCCeEEcCHHHHHHHHHH
Confidence 99776554 4588 9999887521 1 01111 22 3345556789999999999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeeccccc-----CCCCcceEEEEeCchHHHHHhcCCccccccccc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWF-----LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKAS 336 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l-----~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~ 336 (486)
+|++++| +|+............. +||+++.++|||+ ++|. .|++++|++. .+ ..++.+.+-..
T Consensus 262 ~GaL~iV-aad~lal~~l~~pge~-----GADi~vgsgqKwg~P~G~GGP~-aGflavr~~~--~r---~~PgriVG~s~ 329 (993)
T PLN02414 262 NGVKVVM-ATDLLALTMLKPPGEW-----GADIVVGSAQRFGVPMGYGGPH-AAFLATSQEY--KR---LMPGRIIGVSV 329 (993)
T ss_pred cCCEEEE-EECHHHhcCCCCHhhc-----cCcEEEECCCccccCCCCCCCC-eeEEEECHHH--Hh---hCCCcccCccc
Confidence 9999999 8877655555322222 8999999999998 4454 8999998753 22 22222222111
Q ss_pred ccCCccCCC---CCccCCCCCC-------CcHHHHHHH-----HHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 337 QANMVVDYK---DWQIPLGRRF-------RSLKLWMVL-----RLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 337 ~~~~~~~~~---~~~~~~sr~~-------~~l~~~~~l-----~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
+..+...+. ..-.+.-|+- ...++++++ ..+|..|++++.+++..++.++++.|++. |+++..+
T Consensus 330 d~~g~~~~~l~LqtReqhiRrEkaTsNict~qaL~A~la~~y~~~~g~~Gl~~Ia~ri~~la~~l~~~L~~~-G~~~~~~ 408 (993)
T PLN02414 330 DSSGKPALRMAMQTREQHIRRDKATSNICTAQALLANMAAMYAVYHGPEGLKTIAQRVHGLAGVFAAGLKKL-GFQVQSL 408 (993)
T ss_pred CCCCCcccccccccccchhhhcccccchhHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhhc-CCccCCC
Confidence 111111110 0011111221 122344333 35689999999999999999999999885 8999888
Q ss_pred CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 402 RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 402 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
+.+.+|+|++.. . .++.++|.++|+ .++.. . ...+|+|+ +..+|++|||+++++|..
T Consensus 409 ~~f~~vt~~~~~-------~----~~v~~~L~~~gI-~l~~~--~-~~~lrvs~-~e~~T~edId~L~~~l~~ 465 (993)
T PLN02414 409 PFFDTVKVKCSD-------A----DAIADAAAKVGI-NLRVV--D-ANTVTVSF-DETTTLEDVDKLFKVFAG 465 (993)
T ss_pred CCcCeEEEecCC-------H----HHHHHHHHHCCC-eeEEe--c-CCeEEEEe-eccCCHHHHHHHHHHHcc
Confidence 888999998731 1 567778888884 33322 1 23699999 999999999999999964
No 71
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.90 E-value=3.8e-21 Score=190.66 Aligned_cols=321 Identities=13% Similarity=0.099 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHH----
Q 041829 89 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKA---- 164 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~---- 164 (486)
++..+.+.+..+.+. |. ...++.+++.+++++++|.+. +++|+|+|+|+..++.+....-
T Consensus 25 ~~~~v~~a~~~~~~~----~~---~~~~~~~~~~~~~a~~~g~~~---------~~~~~g~t~al~~al~al~~~Gd~~~ 88 (363)
T TIGR01437 25 VSDEVADAQKRGAQN----YF---EIKELVNKTGEYIANLLGVED---------AVIVSSASAGIAQSVAAVITRGNRYL 88 (363)
T ss_pred CCHHHHHHHHHHHhc----CC---CHHHHHHHHHHHHHHhhCCCe---------EEEEcCHHHHHHHHHHHHhcCCCcch
Confidence 455555555554432 11 235677778888999999753 7999999999999888764310
Q ss_pred HHHhCccCCCCeEEEecCCCchh-----HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEE
Q 041829 165 LKRVGKNSLEKLVVYASDQTHSA-----LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCA 239 (486)
Q Consensus 165 ~~~~~~~~~~~~~v~~s~~~H~s-----~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~ 239 (486)
..+......++..|+++. .|+. +..++...|+ +++.++++ +.+|+++++++|+++++ .++.+
T Consensus 89 ~~~~~~s~~~~~eVi~~~-~~~~~~~~~~~~~~~~~g~---~~v~v~~~----~~~d~~~le~ai~~~t~-----ai~~v 155 (363)
T TIGR01437 89 VENLHDSKIEVNEVVLPK-GHNVDYGAPVETMVRLGGG---KVVEAGYA----NECSAEQLEAAITEKTA-----AILYI 155 (363)
T ss_pred hhcccccccccceEEEEC-ccchhcCCchHHHHHhcCC---eEEEEcCC----CCCCHHHHHHhcChhce-----EEEEE
Confidence 000000001223566665 4443 3467778898 88888763 37999999999987654 23445
Q ss_pred ecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchH
Q 041829 240 TVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNT 319 (486)
Q Consensus 240 ~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~ 319 (486)
+.+++++|.+.|+++|+++|+++|+++|+|+||+... ..... + ++|.+++++||++++|. .|+++.+ ++.
T Consensus 156 ~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~---~~~~~----~-g~D~~~~S~~K~l~gp~-~G~l~~~-~~~ 225 (363)
T TIGR01437 156 KSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL---QKYYR----L-GADLVIYSGAKAIEGPT-SGLVLGK-KKY 225 (363)
T ss_pred ecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch---HHHHH----c-CCCEEEEeCCcccCCCc-eEEEEEc-HHH
Confidence 6777899999999999999999999999999997211 11101 1 58999999999999997 7776654 333
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
+... .. +..... . .++.+. ...+.+..++..+-..+ .+.+++..++++++.+.|+++||+++.
T Consensus 226 i~~~-~~---~~~~~~------~-----~~~~~~-~~~~gl~aAl~~~~~~~-~~~~~~~~~~~~~l~~~L~~i~g~~~~ 288 (363)
T TIGR01437 226 IEWV-KL---QSKGIG------R-----AMKVGK-ENILGLTAALEQYLSTG-KESGAEMVAKLTPFIEALNTLKGVSAS 288 (363)
T ss_pred HHHH-Hh---ccCCCc------c-----eeccCH-HHHHHHHHHHHHHHccC-cccHHHHHHHHHHHHHHHhcCCCeEEE
Confidence 3321 11 000000 0 001110 11245555665543222 233334445677899999999999987
Q ss_pred cCCC-------ceEEEEEecCCCCCcccchHHHHHHHHHHHccCc-EEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHH
Q 041829 400 TPRI-------FSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK-IFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEV 471 (486)
Q Consensus 400 ~~~~-------~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~ 471 (486)
.++. ...+.|.....+ ....++.+.|.+.+. ++.... ....+.+|+.+ . .++++|++.++++
T Consensus 289 ~~~~~~~~~~~~~~v~~~~~~~g-------~~~~~l~~~L~~~~~~I~~r~~-~~~~~~~~l~~-~-~~~~~e~~~~~~~ 358 (363)
T TIGR01437 289 IVQDEAGRDIARAEIRFDESELG-------MTAADVVQALRQGEPAIYTRGY-KANEGIIEIDP-R-SVTGGQLDIIVER 358 (363)
T ss_pred EecCCCCCcCceEEEEEeccCCC-------CCHHHHHHHHhcCCCCEEEeee-eecCCeEEEEe-e-cCCHHHHHHHHHH
Confidence 4221 123334332111 112567777766553 333332 33345788887 3 4679999999999
Q ss_pred HHHH
Q 041829 472 MQDK 475 (486)
Q Consensus 472 l~~~ 475 (486)
|.++
T Consensus 359 l~~~ 362 (363)
T TIGR01437 359 IREI 362 (363)
T ss_pred HHHh
Confidence 9875
No 72
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.90 E-value=6.2e-21 Score=190.32 Aligned_cols=337 Identities=12% Similarity=0.039 Sum_probs=205.7
Q ss_pred CcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCc--cccccCh----hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEE
Q 041829 72 THWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVG--FSWITSP----AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVI 145 (486)
Q Consensus 72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~--~~~~~~~----~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~ 145 (486)
..+.+-.|+|+-.. +.....+.+.+..+..+.. .....+. +...+-+++.+.+++++|.+. .++
T Consensus 7 ~~~~s~~YL~~~~~-~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~---------~l~ 76 (370)
T PRK05937 7 IDFVTNDFLGFSRS-DTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPE---------AFI 76 (370)
T ss_pred EEeECCCccCCCCC-HHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCe---------EEE
Confidence 45667789998544 4444555566655532210 0112222 245556666666999999864 466
Q ss_pred cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHH
Q 041829 146 QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAIS 225 (486)
Q Consensus 146 t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~ 225 (486)
.++|+.+|+. +..+... +++.|+++...|.|+..+++.+.. ..+.++ ..|+++|+++++
T Consensus 77 ~~sG~~a~~~-~~~~~~~----------~~d~ii~d~~~H~sv~~~~~~~~~---~~~~~~-------~~d~~~l~~~l~ 135 (370)
T PRK05937 77 VPSGYMANLG-LCAHLSS----------VTDYVLWDEQVHISVVYSLSVISG---WHQSFR-------HNDLDHLESLLE 135 (370)
T ss_pred ECChHHHHHH-HHHHhCC----------CCCEEEEEhhhhHHHHHHHHHcCC---ceEEec-------CCCHHHHHHHHH
Confidence 6667778753 3222111 467788889999999999887643 333332 569999999998
Q ss_pred HHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCCcCCCceeeeccccc
Q 041829 226 RDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWF 303 (486)
Q Consensus 226 ~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l 303 (486)
+..+.+....+|+++.+++++|.+.|+++|.++|+++|+++|||+||+.+.+..+ .+... .+....+.+..+++|.+
T Consensus 136 ~~~~~~~~~~~v~v~~v~s~~G~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~-g~g~~~~~~~~~~~~~~~tlsK~~ 214 (370)
T PRK05937 136 SCRQRSFGRIFIFVCSVYSFKGTLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDD-GKGFCHSLGYENFYAVLVTYSKAL 214 (370)
T ss_pred hhhccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECCccccccCCC-CCchHHhhCCCCCcEEEEechhhh
Confidence 6543223345677889999999999999999999999999999999986543221 11100 12223345567778987
Q ss_pred CCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCC-CCCcHHHHHHHHHhChhhHHHHHHHHHHH
Q 041829 304 LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGR-RFRSLKLWMVLRLYGLENLQGYIRNHIQL 382 (486)
Q Consensus 304 ~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 382 (486)
+ |.|+++++.++ ..........+|.+. .+- .....++..+++.+-.++ +...++..++
T Consensus 215 g-~~G~~vl~~~~--~~~~~~~~~~~~~~s-----------------~~~~~~~~~a~~aal~~l~~~~-~~~~~~l~~l 273 (370)
T PRK05937 215 G-SMGAALLSSSE--VKQDLMLNSPPLRYS-----------------TGLPPHLLISIQVAYDFLSQEG-ELARKQLFRL 273 (370)
T ss_pred h-cCceEEEcCHH--HHHHHHHhCCCCeec-----------------CCCCHHHHHHHHHHHHHHHhCc-HHHHHHHHHH
Confidence 5 56777655432 111111112233211 111 112234445565554344 4456778888
Q ss_pred HHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCH
Q 041829 383 AKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEW 462 (486)
Q Consensus 383 a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~ 462 (486)
++++.+.|.... + ...+.+.+.. . ....+.+.|.++| ++++........++|+++ +.++|+
T Consensus 274 ~~~l~~~l~~~~-------~-~~~~~i~~~~-------~--~~~~~~~~L~~~g-i~v~~~~~~~~~~iRis~-~~~~t~ 334 (370)
T PRK05937 274 KEYFAQKFSSAA-------P-GCVQPIFLPG-------I--SEQELYSKLVETG-IRVGVVCFPTGPFLRVNL-HAFNTE 334 (370)
T ss_pred HHHHHHhcCCCC-------C-CCEEEEEeCC-------h--hHHHHHHHHHHCC-eeEEeeCCCCCCEEEEEc-CCCCCH
Confidence 888888875431 0 0112234332 1 1246677777777 455543333345899999 999999
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASALL 480 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~l~ 480 (486)
+||++++++|+++.+++-
T Consensus 335 edid~l~~~L~~~~~~~~ 352 (370)
T PRK05937 335 DEVDILVSVLATYLEKYQ 352 (370)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 999999999999887653
No 73
>PLN02822 serine palmitoyltransferase
Probab=99.90 E-value=2.3e-20 Score=191.01 Aligned_cols=311 Identities=11% Similarity=0.061 Sum_probs=201.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
....++.+.+++++|.+.. .++++|++ ++..++.+... ++++|+++...|+++..++++.
T Consensus 154 ~~~~~Lee~La~~~~~~~~--------i~~s~G~~-a~~sai~a~~~-----------~gd~Ii~d~~~H~s~~~~~~ls 213 (481)
T PLN02822 154 DVHLDCETKIAKFLGTPDS--------ILYSYGLS-TIFSVIPAFCK-----------KGDIIVADEGVHWGIQNGLYLS 213 (481)
T ss_pred HHHHHHHHHHHHHhCCCCE--------EEECCHHH-HHHHHHHHhCC-----------CCCEEEEeCCccHHHHHHHHHc
Confidence 3344444449999987652 56666554 66555553322 6778889999999999999998
Q ss_pred CCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC---CCcc-EEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 196 GIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI---GLIP-FFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 196 g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~---g~~p-~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
|. +++.++.+ |.++|+..+++..+. ...+ .+|++....+++|.+.|+++|.++|++||+++++|++
T Consensus 214 ~~---~~~~~~~n-------d~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~i~~L~~i~~l~~k~~~~LIvDEa 283 (481)
T PLN02822 214 RS---TIVYFKHN-------DMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQIAPLDEIVRLKEKYRFRVLLDES 283 (481)
T ss_pred CC---eEEEECCC-------CHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCCccCHHHHHHHHHHcCCEEEEECC
Confidence 87 88888754 566677766553322 1123 5788888889999999999999999999999999999
Q ss_pred ccchhccCccchhcc--cCC--cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 272 YAGSACICPEYRQYI--DGV--EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~--~~~--~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
|+.+.+ ....+... .++ ...|.++.+..|.++.+. |+++. +++.+.........|.+.
T Consensus 284 ~s~gvl-G~~G~G~~e~~~v~~~~~dii~~s~sKalg~~G--G~i~g-~~~ii~~~~~~~~~~~fs-------------- 345 (481)
T PLN02822 284 NSFGVL-GKSGRGLSEHFGVPIEKIDIITAAMGHALATEG--GFCTG-SARVVDHQRLSSSGYVFS-------------- 345 (481)
T ss_pred cccccc-CCCCCChHHHcCCCCCCCeEEEecchhhhhhCC--eEEEc-CHHHHHHHHhcCCceeec--------------
Confidence 984332 21111111 122 357899999999997542 55554 433333211122222221
Q ss_pred ccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHH
Q 041829 348 QIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 348 ~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
.+.+ ..+.++..+++.+. ...++.++..+++++|++.|++.+|+++..++...++.+.+...............
T Consensus 346 ---a~lPp~~~~Aa~~aL~~l~--~~~~~~~~l~~~~~~l~~~L~~~~g~~~~~~~~spi~~l~l~~~~~~~~~~~~~~~ 420 (481)
T PLN02822 346 ---ASLPPYLASAAITAIDVLE--DNPSVLAKLKENIALLHKGLSDIPGLSIGSNTLSPIVFLHLEKSTGSAKEDLSLLE 420 (481)
T ss_pred ---cccCHHHHHHHHHHHHHHH--hCHHHHHHHHHHHHHHHHHHHhcCCcccCCCCCCCEEEEEeCCCcccccchHHHHH
Confidence 1111 11122223444332 22567888999999999999998888886666777777777432100001123346
Q ss_pred HHHHHHH-ccCcEEEEeeeE---C---CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 427 KLLDDIN-STGKIFISHTVL---S---GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 427 ~l~~~l~-~~g~~~~~~~~~---~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
++.++|. ++| +++.+..+ . +...+|+++ +..+|++||++++++|+++..+++.
T Consensus 421 ~~~~~Ll~e~G-V~v~~~~~~~~~~~~~~~~lRi~i-s~~~t~edI~~~~~~l~~~~~~~~~ 480 (481)
T PLN02822 421 HIADRMLKEDS-VLVVVSKRSTLDKCRLPVGIRLFV-SAGHTESDILKASESLKRVAASVLK 480 (481)
T ss_pred HHHHHHHhcCC-EEEEeeCCCCcCCCCCCCcEEEEE-CCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 7888887 556 55654322 1 234799998 7788999999999999999887653
No 74
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.90 E-value=7.5e-21 Score=191.75 Aligned_cols=334 Identities=11% Similarity=0.049 Sum_probs=219.8
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|....+...+++.+.+|+.+.+|.... ....++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~~~g~~~a~~~~~~~~~~-------- 113 (393)
T PRK05764 47 EHIKEAAIEALDDGKTKYTPAAGIPELREAIAAKLKRDNGLDYD-----PSQVIVTTGAKQALYNAFMALLD-------- 113 (393)
T ss_pred HHHHHHHHHHHhcCCCCcCCCCChHHHHHHHHHHHHHHhCCCCC-----HHHEEEeCCcHHHHHHHHHHhcC--------
Confidence 45556666555544445666667789999999998888775321 12589999999998777665433
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++...|..+..+++.+|+ +++.+|.++++.+.+|+++|++++++. +.+|+++.++|+||.+-
T Consensus 114 ---~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~------~~~v~~~~p~NPtG~~~ 181 (393)
T PRK05764 114 ---PGDEVIIPAPYWVSYPEMVKLAGG---VPVFVPTGEENGFKLTVEQLEAAITPK------TKALILNSPSNPTGAVY 181 (393)
T ss_pred ---CCCEEEecCCCCcchHHHHHHcCC---EEEEEecCcccCCcCCHHHHHHhhCcc------ceEEEEECCCCCCCccc
Confidence 567788999999999999999999 999999986556889999999988543 34678889999999984
Q ss_pred ---ChHHHHHHHHHhCCEEEeeccccchhccCcc---chhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHH
Q 041829 251 ---PLLALGNIAKSNGMWFHVDAAYAGSACICPE---YRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQS 323 (486)
Q Consensus 251 ---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~---~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~ 323 (486)
++++|+++|++||+|+++|.+|+.+...... ......+...-+.+..++.|.++.|. .+|+++. ++..+...
T Consensus 182 ~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~i~~-~~~~~~~~ 260 (393)
T PRK05764 182 SPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEFTSIASLSPELRDRTITVNGFSKAYAMTGWRLGYAAG-PKELIKAM 260 (393)
T ss_pred CHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCcccHHHcCCCCcCCEEEEecCcccccCccceeEEEec-CHHHHHHH
Confidence 5889999999999999999999765431111 11111112234566777899997552 3777764 33333221
Q ss_pred hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 324 LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
......+ +.....+..+++.+.+ ..+.+++..++..++++.+.+.|++++++++..
T Consensus 261 ~~~~~~~---------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~~- 318 (393)
T PRK05764 261 SKLQSHS---------------------TSNPTSIAQYAAVAALNGPQDEVEEMRQAFEERRDLMVDGLNEIPGLECPK- 318 (393)
T ss_pred HHHHhhc---------------------ccCCChHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhhCCCCcccC-
Confidence 1111000 0011233445555444 245566777778888999999999988888764
Q ss_pred CCce-EEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 402 RIFS-LVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 402 ~~~~-~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
|..+ .+.+.+.+.... ......++.+.+.+ .|..+.++..+...+++|++++ .+++++++++++|.++.++
T Consensus 319 ~~g~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~gi~v~~g~~f~~~~~vRis~~---~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 319 PEGAFYVFPNVSKLLGK---SITDSLEFAEALLEEAGVAVVPGIAFGAPGYVRLSYA---TSLEDLEEGLERIERFLES 391 (393)
T ss_pred CCcceEEEEeccccccc---ccCCHHHHHHHHHHhCCEEEccccccCCCCEEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 4444 334444321100 00012456666654 4644334333443569999993 3699999999999988764
No 75
>PLN02483 serine palmitoyltransferase
Probab=99.90 E-value=8.6e-21 Score=194.58 Aligned_cols=344 Identities=13% Similarity=0.093 Sum_probs=219.3
Q ss_pred CcCCCCcccccCCCCCCHHHHHHHHHHHhcCcC---ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCc
Q 041829 72 THWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIV---GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGT 148 (486)
Q Consensus 72 ~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~g 148 (486)
.++.+-.|+|+-...+.....+.+.+..+-... ...+...+...++|+. +++++|.+. .+++++
T Consensus 103 ~n~~s~~YLgl~~~~~~~~~~~~~ai~~~g~~~~~sr~~~g~~~~~~ele~~----lA~~~g~~~---------ai~~~~ 169 (489)
T PLN02483 103 LNLGSYNYLGFAAADEYCTPRVIESLKKYSASTCSSRVDGGTTKLHRELEEL----VARFVGKPA---------AIVFGM 169 (489)
T ss_pred EEeecCCccCcCCCCHHHHHHHHHHHHHhCCCCCccccccCCcHHHHHHHHH----HHHHhCCCc---------EEEECC
Confidence 445667788886444445556666666542211 1223344556666666 899999654 466666
Q ss_pred hhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH
Q 041829 149 ASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL 228 (486)
Q Consensus 149 gt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~ 228 (486)
|+.+|+.++.+... +++.|++++..|.++..+++..|+ +++.+|.+ |+++|++.+++..
T Consensus 170 G~~an~~~i~al~~-----------~Gd~Vi~d~~~h~s~~~~~~~~Ga---~v~~~~~~-------d~~~le~~l~~~i 228 (489)
T PLN02483 170 GYATNSTIIPALIG-----------KGGLIISDSLNHNSIVNGARGSGA---TIRVFQHN-------TPSHLEEVLREQI 228 (489)
T ss_pred HHHHHHHHHHHhCC-----------CCCEEEEcchhhHHHHHHHHHcCC---eEEEEeCC-------CHHHHHHHHHhhh
Confidence 78788766554332 678899999999999999999999 99998853 6788888776543
Q ss_pred hCC-------CccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchh--cccCC--cCCCceee
Q 041829 229 TIG-------LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQ--YIDGV--EEADSFNM 297 (486)
Q Consensus 229 ~~g-------~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~--~~~~~--~~aDs~~~ 297 (486)
..+ ....+|++....+++|.+.++++|+++|++||+++++|+||+.+.. .+..+. ...++ ...|.++.
T Consensus 229 ~~~~p~t~~p~~k~livve~v~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~-G~~G~g~~~~~~v~~~~~dI~~~ 307 (489)
T PLN02483 229 AEGQPRTHRPWKKIIVIVEGIYSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAV-GKTGRGVCELLGVDPADVDIMMG 307 (489)
T ss_pred hccccccccCCceEEEEECCCCCCCCcccCHHHHHHHHHHcCCEEEEECcCccCcc-CCCCCchHHhcCCCcccCcEEEE
Confidence 211 1124566666678999999999999999999999999999974332 111110 01111 35789999
Q ss_pred ecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh----ChhhHH
Q 041829 298 NAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY----GLENLQ 373 (486)
Q Consensus 298 ~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~----g~~g~~ 373 (486)
+++|.++.+ .|+++ .+++.+.........+.... .........+.++++.+ |.+...
T Consensus 308 SfSKs~g~~--GG~i~-~~~~li~~l~~~~~~~~~~~----------------~~~p~~~~~~~aaL~~l~~~~g~~~~~ 368 (489)
T PLN02483 308 TFTKSFGSC--GGYIA-GSKELIQYLKRTCPAHLYAT----------------SMSPPAVQQVISAIKVILGEDGTNRGA 368 (489)
T ss_pred ecchhcccC--ceEEE-cCHHHHHHHHHhCccccccC----------------CcCHHHHHHHHHHHHHHHhCccccchH
Confidence 999999764 26655 44443332211122221110 00001111222334332 223345
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE----CCEe
Q 041829 374 GYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL----SGKY 449 (486)
Q Consensus 374 ~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~ 449 (486)
++.++..+++++|++.|+++ |+++..+....++.+.+.. .....++.+.|.++|...+ +..+ .+..
T Consensus 369 ~~~~~l~~~~~~l~~~L~~~-G~~v~~~~~sp~~~l~l~~--------~~~~~~~~~~Ll~~GI~v~-~~~fp~~p~~~~ 438 (489)
T PLN02483 369 QKLAQIRENSNFFRSELQKM-GFEVLGDNDSPVMPIMLYN--------PAKIPAFSRECLKQNVAVV-VVGFPATPLLLA 438 (489)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCCCEEEEEECC--------HHHHHHHHHHHHHCCcEEe-eeCCCCCCCCCc
Confidence 66788999999999999998 8887655444555555432 1123467777888885544 3322 2236
Q ss_pred EEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 450 ILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 450 ~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.+|+++ +..+|++||++++++|+++.+.+.
T Consensus 439 ~vRi~i-sa~~t~edId~~l~~L~~~~~~~~ 468 (489)
T PLN02483 439 RARICI-SASHSREDLIKALEVISEVGDLVG 468 (489)
T ss_pred eEEEEe-CCCCCHHHHHHHHHHHHHHHHHhC
Confidence 899999 777899999999999999887643
No 76
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.89 E-value=3e-21 Score=192.50 Aligned_cols=325 Identities=15% Similarity=0.093 Sum_probs=211.8
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHH-----HHHhC------------
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKA-----LKRVG------------ 169 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~-----~~~~~------------ 169 (486)
.|.......++|..+.+...++||.+.. .+=.-||+.||+.+..+..... +.+.|
T Consensus 86 yy~g~~~~d~ie~l~~~ra~~lf~a~~a--------nvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~ 157 (493)
T PRK13580 86 FYAGCQNVDTVEWEAAEHAKELFGAEHA--------YVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDW 157 (493)
T ss_pred ccCCCchHHHHHHHHHHHHHHHhCCCcc--------cccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhh
Confidence 3445667889999999999999998764 4566678999998887765420 00000
Q ss_pred cc---CCCCeEEEe---cCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCC
Q 041829 170 KN---SLEKLVVYA---SDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGT 243 (486)
Q Consensus 170 ~~---~~~~~~v~~---s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~ 243 (486)
++ -..++.|+. +...|.+.-......|... +++..+++++ ++.+|++++++++++.+ | .|++++.+
T Consensus 158 ~~~~~~~~gd~i~~l~l~~GGHlthg~~~n~~~~~~-~~~~y~vd~~-~g~iD~d~l~~~~~~~~-----p-lvii~g~S 229 (493)
T PRK13580 158 EALRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMF-HQRSYGVDPD-TGLLDYDEIAALAREFK-----P-LILVAGYS 229 (493)
T ss_pred hhhhccCCCCEEEeecCCCCCeeecCcccchhhhee-eeEecccCcc-cCccCHHHHHHHHhhcC-----C-EEEEeCcc
Confidence 00 012344543 2334544433333334211 5566777754 46899999999998754 3 45666666
Q ss_pred ccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHH
Q 041829 244 TSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQS 323 (486)
Q Consensus 244 t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~ 323 (486)
+. |.+.|+++|+++|+++|++++||+||+.+.+....+........++|++++++||++++|.| |++++++. +.+.
T Consensus 230 ~~-~~~~dl~~i~eia~~~gA~L~VD~AH~~Gligg~~~~~~~~~~~~~D~vtgT~hKaL~GP~G-G~I~~~~~--l~~~ 305 (493)
T PRK13580 230 AY-PRRVNFAKLREIADEVGAVLMVDMAHFAGLVAGKVFTGDEDPVPHADIVTTTTHKTLRGPRG-GLVLAKKE--YADA 305 (493)
T ss_pred cc-CCCcCHHHHHHHHHHcCCEEEEECchhhceeccccchhhcCCCCCCcEEEeCChhhccCCCe-EEEEecHH--HHHH
Confidence 66 55779999999999999999999999987765333221112234799999999999988874 77777643 2223
Q ss_pred hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC
Q 041829 324 LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PR 402 (486)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~ 402 (486)
+....+|+.... -.....+...+++..-...++++.++..+++++|++.|.+. ||.++. ..
T Consensus 306 L~~a~P~i~gg~-----------------l~p~iAA~avAl~e~~~~ef~~y~~~l~~Na~~La~~L~~~-G~~vv~ggT 367 (493)
T PRK13580 306 VDKGCPLVLGGP-----------------LPHVMAAKAVALAEARTPEFQKYAQQVVDNARALAEGFLKR-GARLVTGGT 367 (493)
T ss_pred HhhCCCcccCCC-----------------ccHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHhc-CCCccCCCC
Confidence 322234543321 01111222334444433455778889999999999999997 898864 35
Q ss_pred CceEEEEEecCCCCCcccchHHH-HHHHHHHHccCcEEEE----eeeECC---EeEEEEEecCCC----CCHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLN-HKLLDDINSTGKIFIS----HTVLSG---KYILRFAVGAPL----TEWRHVNAAWE 470 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~-~~l~~~l~~~g~~~~~----~~~~~~---~~~lRi~~~~~~----~t~~di~~~~~ 470 (486)
+.+++.+.+.+ .... ..+.+.|.+.| +++. |+...+ ...||+++ +.. .+++|++++++
T Consensus 368 dshIV~V~lg~--------~~~~g~~a~~~L~e~G-I~vn~i~~Ptvp~g~~~~srLRIg~-~A~ttrg~teedi~~iad 437 (493)
T PRK13580 368 DNHLVLIDVTS--------FGLTGRQAESALLDAG-IVTNRNSIPSDPNGAWYTSGIRLGT-PALTTLGMGSDEMDEVAE 437 (493)
T ss_pred CCCEEEEEeCC--------HHHHHHHHHHHHHHCC-eEEccccCCCCCCCCCCCceEEecc-chhhhcCCCHHHHHHHHH
Confidence 66888888753 2222 34556777777 4444 333344 56899998 553 36999999999
Q ss_pred HHHHHHHHH
Q 041829 471 VMQDKASAL 479 (486)
Q Consensus 471 ~l~~~~~~l 479 (486)
.|.++.+..
T Consensus 438 ~l~~~l~~~ 446 (493)
T PRK13580 438 LIVKVLSNT 446 (493)
T ss_pred HHHHHHHhh
Confidence 998887643
No 77
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.89 E-value=6.8e-22 Score=193.41 Aligned_cols=368 Identities=13% Similarity=0.098 Sum_probs=197.7
Q ss_pred CChhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHH-H------HHHhcCcCc
Q 041829 33 VQPGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGE-M------LSAGLNIVG 105 (486)
Q Consensus 33 ~~~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~------l~~~~n~~~ 105 (486)
.-|++++..-+.++|+. .++.++++ ++.....+|.. ...|+|--...--.|+.+.+ . +++ +.+++
T Consensus 30 ~IP~~i~~~~~~~lp~~-~sE~e~~r---~~~~la~kN~~---~~~fiG~G~y~~~~P~~i~~~i~~~~ef~Ta-YtPYQ 101 (429)
T PF02347_consen 30 DIPEEIRLKKPLNLPEP-LSEYELLR---HLERLASKNKS---YTSFIGAGSYTHYVPAVIDRNILSRPEFYTA-YTPYQ 101 (429)
T ss_dssp TS-GGG-SS-----------HHHHHH---HHHHHHTTS-----TTS---CTTT-----HHHHH-HHCCHHCCCS--STTS
T ss_pred hCCHhhcCCCCCCCCCC-CCHHHHHH---HHHHHHhcCCC---CCccccccccCceeChhhcCccccChhhhcc-CCCCC
Confidence 34677766656778774 89999999 99888877765 44566633223344445544 2 222 22333
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
..-++|.....+|.+.+ ++++.|++.. +..+..++|.+-..++++.|... + ++..|+++...|
T Consensus 102 pEisQG~Lq~lfe~Qs~--i~eLTGmdva-------NaSlyd~atA~aEa~~ma~r~~~-~-------~~~~vlv~~~~h 164 (429)
T PF02347_consen 102 PEISQGRLQALFEYQSM--ICELTGMDVA-------NASLYDGATAAAEAMLMAVRATK-R-------KRNKVLVPESLH 164 (429)
T ss_dssp GGGBHHHHHHHHHHHHH--HHHHHTSSEE--------SEBSSCCHHHHHHHHHHHHHHT-T----------EEEEETTS-
T ss_pred cHHHHHHHHHHHHHHHH--HHHhhCCCcc-------CCCCCChhHHHHHHHHHHHHhcc-c-------CCcEEEEcCCcC
Confidence 33345566667777754 9999999974 46677777744443334333321 0 234799999999
Q ss_pred hhHHHHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 186 SALQKACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 186 ~s~~~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
+.....++. .|+ +++.+|.++++ ..| .+ ....|+++.|+ ..|.++++++|++++|+
T Consensus 165 P~~~~v~~t~a~~~g~---~iv~~~~~~~~--~~d--------~~------~~a~v~vq~Pn-~~G~~ed~~~i~~~~h~ 224 (429)
T PF02347_consen 165 PQTRAVLRTYAAPLGI---EIVEVPLDEDG--TTD--------DD------DTAAVMVQNPN-TFGVFEDIKEIADIAHA 224 (429)
T ss_dssp CHHHHHHHHHCCHCCE---EEEEE-BBTTC--SB---------ST------TEEEEEEESS--TTSB--THHHHHHHHHH
T ss_pred hhhHHHHHHhhhhCCe---EEEEecccccC--Ccc--------cc------CeEEEEeecCC-CCceEeeHHHHHHHHHH
Confidence 998876664 566 89999987654 666 22 24678888876 67999999999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-----cceEEEEeCchHHHHHhcCCccccccccc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-----DCSALWVKDRNTLIQSLSTNPEFLKNKAS 336 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-----~~g~l~~r~~~~~~~~~~~~~~yl~~~~~ 336 (486)
+|..+++ +|.--........... +||.+ ++-||.++.|. ++|++.+|+. ....-|+.+.....
T Consensus 225 ~gal~~~-~ad~~aL~~l~~Pge~-----GADI~-vg~~Q~fg~p~~~GGP~~G~~a~~~~-----l~r~lPGRiVG~t~ 292 (429)
T PF02347_consen 225 AGALVIV-GADPNALGGLKSPGEY-----GADIV-VGEHQTFGIPMGFGGPGAGFFAVRED-----LVRQLPGRIVGQTK 292 (429)
T ss_dssp TT-EEEE-CGGCCGCCTC--GGGG-----T-SEE-EECCTTTT---CCC-S--EEEEE-GG-----GGGGS-S-EEEEEE
T ss_pred cCCEEEE-ecCHHHHhCcCChhhc-----CccEE-eeCCCCCcccCCCCCCCeeeEEEhhh-----hhhhCCCceecccc
Confidence 9999988 7654333322222222 89999 55688887774 4788888875 22334555544332
Q ss_pred ccCCccCCCCCccC----CCCC------------CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 337 QANMVVDYKDWQIP----LGRR------------FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 337 ~~~~~~~~~~~~~~----~sr~------------~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
+..+...+. .+++ .-|| ..++.+++.+..+|.+|+++..+++..+|+|++++|++..++.+ .
T Consensus 293 D~~G~~~~~-ltLqtREQHIrReKAtSNIctnqaL~A~~a~~Yl~~~G~~GL~~iA~~~~~~A~yl~~~L~~~~~~~~-~ 370 (429)
T PF02347_consen 293 DADGKRAFV-LTLQTREQHIRREKATSNICTNQALLALAAAIYLAYLGPEGLREIAERIHLNAHYLAERLKKIYGLPF-D 370 (429)
T ss_dssp BCCCSCCEE-EE-GGGTCHHHGCCSTT---SS-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTBECS-S
T ss_pred cccccceee-eccccccccccccchhhhhhhhHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhcCccc-C
Confidence 222222211 0111 1112 12346677888899999999999999999999999999734433 3
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
.+.+.-+.....+ . ....++.++....| +.. .... ...+-+|+ ...+|++|||++++++
T Consensus 371 ~~~f~e~v~~~~~-------~-~~~~~l~~~~~~~g-l~~--~~~~-~~~~li~~-TE~~t~edid~lv~~f 429 (429)
T PF02347_consen 371 NPFFFEFVVVFSK-------D-KEVEELLKRGIEGG-LNL--RYPD-DGALLICV-TETRTKEDIDRLVEAF 429 (429)
T ss_dssp SSSBSSEEEEESS---------HHHHHHHHTT-----EEE--GGG--SSEEEEE---TT--HHHHHHHHH--
T ss_pred CCCceeeeeecCC-------c-HHHHHHHHHHHhcC-CCc--cccC-CCeEEEEc-cCCCCHHHHHHHHhcC
Confidence 3444433333332 1 11223555555555 222 1112 23788999 8999999999999875
No 78
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.89 E-value=2.8e-21 Score=192.02 Aligned_cols=307 Identities=18% Similarity=0.172 Sum_probs=202.2
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
+..++...++|+. +++++|.+. .++++|||+|+..++.+.+.. +++.|+++..+|.+
T Consensus 14 ~~~~~~~~~~~~~----la~~~~~~~---------~~~~~sgt~al~~~l~~l~~~----------~gd~vl~~~~~~~~ 70 (352)
T cd00616 14 LTLGPKVREFEKA----FAEYLGVKY---------AVAVSSGTAALHLALRALGIG----------PGDEVIVPSFTFVA 70 (352)
T ss_pred ccCCHHHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHH
Confidence 3456777778877 888888643 788899999988888765321 67789999999999
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
+..++...|+ +++.++++++ ++.+|+++|+++++++ +.+|+++ +++|.+.|+++|.++|+++|++++
T Consensus 71 ~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~------~~~v~~~---~~~G~~~~~~~i~~l~~~~~i~li 137 (352)
T cd00616 71 TANAILLLGA---TPVFVDIDPD-TYNIDPELIEAAITPR------TKAIIPV---HLYGNPADMDAIMAIAKRHGLPVI 137 (352)
T ss_pred HHHHHHHcCC---eEEEEecCCC-cCCcCHHHHHHhcCcC------CeEEEEE---CCCCCcCCHHHHHHHHHHcCCeEE
Confidence 9999999999 9999999763 4799999999988543 3456655 368999999999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeee--cccccCCCCcceEEEEeCchHHHHHhcCC-cccccccccccCCccCC
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMN--AHKWFLTNFDCSALWVKDRNTLIQSLSTN-PEFLKNKASQANMVVDY 344 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~--~hK~l~~p~~~g~l~~r~~~~~~~~~~~~-~~yl~~~~~~~~~~~~~ 344 (486)
+|+||+.+...... . + + ...|..+++ .||++..+ ..|++++++++...+..... ..+... ...+
T Consensus 138 ~D~a~~~g~~~~~~--~-~-~-~~~d~~~~S~~~~K~~~~~-~gg~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 204 (352)
T cd00616 138 EDAAQALGATYKGR--K-V-G-TFGDAGAFSFHPTKNLTTG-EGGAVVTNDEELAERARLLRNHGRDRD-------RFKY 204 (352)
T ss_pred EECCCCCCCeECCE--E-c-c-cCcceeEEcCCCCCCCccc-CceEEEECCHHHHHHHHHHHHcCCCCC-------CCcc
Confidence 99999755433211 0 1 1 124555555 56999544 35667777655433221110 010000 0000
Q ss_pred CCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----CceEEEEEecCCCCCcc
Q 041829 345 KDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----IFSLVCFRLLPPHNDED 419 (486)
Q Consensus 345 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----~~~~v~f~~~~~~~~~~ 419 (486)
.......+-+...+.....+ ...++++++.++..++++++++.|+++|+++++.++ ...+++|.+....
T Consensus 205 ~~~~~~~~~~~~~~~aa~~~--~~l~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~---- 278 (352)
T cd00616 205 EHEILGYNYRLSEIQAAIGL--AQLEKLDEIIARRREIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEA---- 278 (352)
T ss_pred ccceeeeccCcCHHHHHHHH--HHHHhhHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCceeeEEEEEEECCcC----
Confidence 00011111122233333333 234667888889999999999999999999987543 2356777765310
Q ss_pred cchHHHHHHHHHHHccCcEEEE----eeeEC--------------------CEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 420 HGNKLNHKLLDDINSTGKIFIS----HTVLS--------------------GKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 420 ~~~~~~~~l~~~l~~~g~~~~~----~~~~~--------------------~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.....++.+.|.+.|. .++ +.... ....+|+++ ++++|++||++++++|+
T Consensus 279 --~~~~~~v~~~L~~~gI-~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~l~l~~-~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 279 --GESRDELIEALKEAGI-ETRVHYPPLHHQPPYKKLLGYPPGDLPNAEDLAERVLSLPL-HPSLTEEEIDRVIEALR 352 (352)
T ss_pred --CCCHHHHHHHHHHCCC-CeeeecCccccCHhhhhccCCCcCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHhC
Confidence 1122456777777764 222 11000 025899999 99999999999999874
No 79
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.89 E-value=3.8e-22 Score=197.61 Aligned_cols=336 Identities=14% Similarity=0.063 Sum_probs=217.1
Q ss_pred ccCCCCCCHHHHHHHHHHHhc----CcCccccccC---hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCc-hhHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGL----NIVGFSWITS---PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGT-ASEA 152 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~----n~~~~~~~~~---~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~g-gt~a 152 (486)
.|.|++...|..+.+.+..++ |.+...+..+ +.+.++.+++++.+++++|.+.+ ...+||.| ||++
T Consensus 2 ~~~pGp~~~p~~V~~a~~~~~~~~~~~~rg~~~~~~r~~~~~~~~~~~r~~l~~l~~~~~~------~~vvf~~gs~T~a 75 (355)
T cd00611 2 NFSAGPAALPEEVLEQAQKELLDFNGLGMSVMEMSHRSKDFEAIVNEAESDLRELLNIPDN------YKVLFLQGGATGQ 75 (355)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCC------ceEEEEcCCchHH
Confidence 356777777777777776665 4444455555 66778889999999999998543 25788876 8988
Q ss_pred HHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccC-HHHHHHHHHHHHhCC
Q 041829 153 VLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLS-PDSLAEAISRDLTIG 231 (486)
Q Consensus 153 ~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id-~~~L~~~i~~~~~~g 231 (486)
+..++..... .+.+.++|++....|.+ .+.++..|+ +++.++++.++. ..+ ++..+..++++
T Consensus 76 ~~~~~~~l~~--------~~~~~~~i~~g~~~~~~-~~~a~~~g~---~~~~~~~~~~g~-~~~~~~~~~~~~~~~---- 138 (355)
T cd00611 76 FAAVPLNLLG--------DKGTADYVVTGAWSAKA-AKEAKRYGG---VVVIVAAKEEGK-YTKIPDVETWDLAPD---- 138 (355)
T ss_pred HHHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHhcCC---CcEEEecccccC-CCCCCCHhhcCCCCC----
Confidence 7776654311 11245667666555544 446677798 999999864321 113 22222333322
Q ss_pred CccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceE
Q 041829 232 LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSA 311 (486)
Q Consensus 232 ~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~ 311 (486)
+.+|++++.+|.||.+ + .++++.+|+.++||++++.+....+- +..|.+..++||+++ |.|.|+
T Consensus 139 --~~lV~~~h~~t~tG~~--~---~~i~~~~g~~~~VDa~qs~g~~~idv--------~~~~~~~ss~~K~lG-P~G~g~ 202 (355)
T cd00611 139 --AAYVHYCSNETIHGVE--F---DEVPDTGGVPLVADMSSNILSRPIDV--------SKFGVIYAGAQKNLG-PAGVTV 202 (355)
T ss_pred --CCEEEEeCCcccccEE--c---ceecccCCCeEEEEccccccCCCCCH--------HHhCEEEeecccccC-CCceEE
Confidence 4589999999999997 2 24556699999999999887765542 123444555999875 999999
Q ss_pred EEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC--CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHH
Q 041829 312 LWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR--FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEG 388 (486)
Q Consensus 312 l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~--~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~ 388 (486)
++++++. +.+.-...+.+..... ...... ..+.+ ....++..+++.+-.+ |++++.+++.++++++++
T Consensus 203 l~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~---~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l~~~l~~ 273 (355)
T cd00611 203 VIVRKDL-LGKARKITPSMLNYKT-----HADNNS---LYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYD 273 (355)
T ss_pred EEECHHH-HhhcccCCCCcccHHH-----HHhcCC---CCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 9998754 2221111111110000 000000 01111 2345777888888777 799999999999999999
Q ss_pred HHhcCCCeE-EecC--CCc-eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHH
Q 041829 389 LVAQDLRFE-VVTP--RIF-SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRH 464 (486)
Q Consensus 389 ~l~~~~~~~-~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~d 464 (486)
.|+++||+. ...+ ... .+++|.+... .+..++.+.+.+.|.+ .... ....+.+|+|+ .+++|++|
T Consensus 274 ~l~~~~gl~~~~~~~~~rs~~vvsf~~~~~--------~l~~~~~~~~~r~G~~-~~~~-~~~~g~vR~S~-~~~nt~ed 342 (355)
T cd00611 274 TIDNSNGFYRGPVDKRARSRMNVPFRLGKE--------ELEKEFLKEAEAAGMI-GLKG-HRSVGGIRASI-YNALSLEG 342 (355)
T ss_pred HHHhCccccccCCCHHHcCceEEEEEcCCh--------hhhHHHHHHHHHCCCc-ccCC-CcccCeEEEEc-cCCCCHHH
Confidence 999998863 2211 133 3588887531 2334555667778854 3222 11235899999 89999999
Q ss_pred HHHHHHHHHHH
Q 041829 465 VNAAWEVMQDK 475 (486)
Q Consensus 465 i~~~~~~l~~~ 475 (486)
|++++++|+++
T Consensus 343 i~~l~~al~~~ 353 (355)
T cd00611 343 VQALADFMKEF 353 (355)
T ss_pred HHHHHHHHHHH
Confidence 99999999885
No 80
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.89 E-value=8.1e-21 Score=179.77 Aligned_cols=328 Identities=16% Similarity=0.128 Sum_probs=227.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
+..+..++-.++.+||+++.|++.- .+-.+.|+.+-+++|++.|.....+ +.. .+.+|++++.+|-...
T Consensus 103 ~vqG~l~li~~Lq~~L~~ITG~Dav--------sLQP~AGAqGE~aGll~Ir~YHe~r-G~~--~R~~~LIP~SAHGTNP 171 (496)
T COG1003 103 QVQGYLELIYELQEWLKEITGMDAV--------SLQPNAGAQGEYAGLLAIRAYHESR-GEG--HRNICLIPDSAHGTNP 171 (496)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCcee--------eccCCCCcchhhHHHHHHHHHHHHc-CCC--cCcEEEeeccccCCCh
Confidence 4567788999999999999999873 3444567778888888777644322 211 6788999999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-CChHHHHHHHHHhCCEEEe
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV-DPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i-d~l~~I~~ia~~~g~~lhv 268 (486)
..|.+.|. +|+.|+++++| .+|+++|++++.++++ ++.+|.++| .|.+ .+|.+|++|.+++|..+..
T Consensus 172 ASAam~G~---~VV~V~~~~~G--~VDlddLk~k~~~~~A------alMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~ 239 (496)
T COG1003 172 ASAAMAGF---KVVVVKCDENG--NVDLDDLRAKAEDNLA------ALMITNPST-LGVFEEDIREICEIVHEAGGQVYY 239 (496)
T ss_pred hhHhhcCc---eEEEEecCCCC--CccHHHHHHHhcccee------EEEeccCcc-cccchhhHHHHHHHHHHcCCEEEe
Confidence 99999999 99999999765 9999999999987654 677888776 4777 6799999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCC-----cceEEEEeCchHHHHHhcCCccccccc----ccccC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-----DCSALWVKDRNTLIQSLSTNPEFLKNK----ASQAN 339 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-----~~g~l~~r~~~~~~~~~~~~~~yl~~~----~~~~~ 339 (486)
|||.--..+-.-+.. .=++|.+.++.||++..|- |.|.+.++.. + .+|+... .....
T Consensus 240 DGANlNA~vG~~rPG-----d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~--L-------~pfLP~p~~~~~~~~y 305 (496)
T COG1003 240 DGANLNAIVGLARPG-----DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAH--L-------APFLPGPVVYHDVGEY 305 (496)
T ss_pred cCcchhhhhcccccc-----ccccceEEeecccccccCCCCCCCCCCceehHhh--c-------cccCCCCcccCCCccc
Confidence 998643322111111 1289999999999998875 4566666531 2 2344321 10000
Q ss_pred CccCC-CCCccCCCCCC----C-cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC---ceEEEEE
Q 041829 340 MVVDY-KDWQIPLGRRF----R-SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI---FSLVCFR 410 (486)
Q Consensus 340 ~~~~~-~~~~~~~sr~~----~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~---~~~v~f~ 410 (486)
..+. ..+++.-++.+ . -...|+.++.+|.+|+++.-+...-+|+|+.++|+. .+++.-.+. ...+.+.
T Consensus 306 -~~~~~~~~s~g~~~a~~Gs~~il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~--~y~~~y~~~~~~~HE~ild 382 (496)
T COG1003 306 -RLDYDGKKSIGVSAAPYGSASILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKG--YYPVPYTGENRVAHECILD 382 (496)
T ss_pred -cccCCCCccceeeccccCcchHHHHHHHHHHHHhHHHHHHHHHHHHHhHHHHHHHhhh--cCccccCCCCcceeEEEee
Confidence 0000 11111112221 1 258899999999999999999999999999999987 467654333 3455555
Q ss_pred ecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC---CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 411 LLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS---GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
..+.. ++..-....+.++|++.|. -.||..- -.+.+=|=. ...-+++++|++++++.++.++..+..
T Consensus 383 ~r~l~---~~~Gv~~~DvAKrLlD~Gf--HaPT~~FPliV~~tLMIEP-TEsEsk~eLDrf~dami~I~~Ea~~~~ 452 (496)
T COG1003 383 ARPLK---KETGVRALDVAKRLLDYGF--HAPTMYFPLIVAGTLMIEP-TESESKEELDRFIDAMIAIREEADAVP 452 (496)
T ss_pred chHhH---hhcCCcHHHHHHHHHhcCC--CCCcccCccccccceeecC-CCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 44311 0122233567888888883 2333221 223455555 667789999999999999998877543
No 81
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.89 E-value=2e-20 Score=189.00 Aligned_cols=305 Identities=12% Similarity=0.055 Sum_probs=201.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
.+..++.+++.+++++++|.+. .+++++|++++..++.+... +++.|++++..|+++...
T Consensus 83 ~G~~~l~~~l~~~la~~~g~~~---------~i~~tsG~~a~~~~~~~l~~-----------~gd~vi~~~~~~~~~~~~ 142 (397)
T PRK06939 83 CGTQDLHKELEEKLAKFLGTED---------AILYSSCFDANGGLFETLLG-----------KEDAIISDALNHASIIDG 142 (397)
T ss_pred cCCcHHHHHHHHHHHHHhCCCc---------EEEEcChHHHHHHHHHHhCC-----------CCCEEEEEhhhhHHHHHH
Confidence 3456788888899999999653 34444458888776654322 678899999999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
++.+|. +++.++. +|+++|++++++....+.++.+|+.....+++|.++++++|.++|+++|+|+++|++
T Consensus 143 ~~~~~~---~~~~~~~-------~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~ 212 (397)
T PRK06939 143 VRLCKA---KRYRYAN-------NDMADLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDS 212 (397)
T ss_pred HHhcCC---ceEEeCC-------CCHHHHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECc
Confidence 999988 7776653 589999999876433333466777766788999999999999999999999999999
Q ss_pred ccchhccC-ccchhcccCC-cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 272 YAGSACIC-PEYRQYIDGV-EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 272 ~g~~~~~~-~~~~~~~~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
|+.+.... ........++ ...|.++.++||+++++ ..|+++.+. ..+........++..
T Consensus 213 ~~~g~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~~g~-r~G~v~~~~-~~~~~l~~~~~~~~~----------------- 273 (397)
T PRK06939 213 HAVGFVGENGRGTVEHFGVMDRVDIITGTLGKALGGA-SGGYTAGRK-EVIDWLRQRSRPYLF----------------- 273 (397)
T ss_pred ccccCcCCCCCCHHHHcCCCCCCcEEEEECHHHhCcc-CceEEEeCH-HHHHHHHHhCccccc-----------------
Confidence 96332211 0000111122 25788999999999655 457776653 333322111111211
Q ss_pred CCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHH
Q 041829 350 PLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKL 428 (486)
Q Consensus 350 ~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l 428 (486)
.++.. ....++..+++.+. . ..++.++..++++++.+.|+++ ++++. ++...++.+.+.. .....++
T Consensus 274 ~~~~~~~~~~a~~~al~~~~-~-~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------~~~~~~~ 341 (397)
T PRK06939 274 SNSLAPAIVAASIKVLELLE-E-SDELRDRLWENARYFREGMTAA-GFTLG-PGEHPIIPVMLGD--------AKLAQEF 341 (397)
T ss_pred cCCCCHHHHHHHHHHHHHHh-c-CHHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEECC--------HHHHHHH
Confidence 11111 11123334444432 1 2466778888999999999887 67654 3444555444321 1234678
Q ss_pred HHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 429 LDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 429 ~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.+.|.++|.. +.+..+ .+..++|+++ +..++++||++++++|+++.+++
T Consensus 342 ~~~L~~~gI~-v~~~~~~~~~~~~~~iRi~~-~~~~~~~~i~~~l~~L~~~~~~~ 394 (397)
T PRK06939 342 ADRLLEEGVY-VIGFSFPVVPKGQARIRTQM-SAAHTKEQLDRAIDAFEKVGKEL 394 (397)
T ss_pred HHHHHHCCce-EeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 8888888744 434322 2346899999 77789999999999999887654
No 82
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.89 E-value=2.3e-20 Score=188.62 Aligned_cols=337 Identities=16% Similarity=0.112 Sum_probs=212.9
Q ss_pred cCCCCcccccCCCCCCHHHHHHHHHHHhcCcCc-c--ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCch
Q 041829 73 HWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVG-F--SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTA 149 (486)
Q Consensus 73 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~gg 149 (486)
.+.+-.|+|.-. .|.....+.+.+..+-...+ . .+...+...++|++ +++++|.+. .+++++|
T Consensus 49 ~~~sn~ylgl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~----la~~~g~~~---------~l~~~sG 114 (402)
T TIGR01821 49 VWCSNDYLGMGQ-HPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAE----LADLHGKES---------ALVFTSG 114 (402)
T ss_pred EeEccCcCCCCC-CHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHH----HHHHhCCCe---------EEEECch
Confidence 455667888742 23334444444444211111 1 11123444555555 899998543 6888889
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh
Q 041829 150 SEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT 229 (486)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~ 229 (486)
++||..++..++... ++.+|+++...|.++...+...|. ++..++ ..|+++|++.++...
T Consensus 115 ~~an~~ai~~l~~~~---------~~~~v~~~~~~h~s~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~- 174 (402)
T TIGR01821 115 YVANDATLATLAKII---------PGCVIFSDELNHASMIEGIRHSGA---EKFIFR-------HNDVAHLEKLLQSVD- 174 (402)
T ss_pred HHHHHHHHHHhhCCC---------CCCEEEEcchHhHHHHHHHHHcCC---eEEEEC-------CCCHHHHHHHHHhcc-
Confidence 999998887665321 456777777789999999888888 666554 237888988886431
Q ss_pred CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCC-cCCCceeeecccccCCC
Q 041829 230 IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGV-EEADSFNMNAHKWFLTN 306 (486)
Q Consensus 230 ~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~-~~aDs~~~~~hK~l~~p 306 (486)
...+.+|+++.+++++|.+.|+++|.++|+++|++++||+||+.+.+ .+...... .++ ...|.+..++.|.++.+
T Consensus 175 -~~~~~~v~~e~~~~~~G~~~~l~~i~~l~~~~~~~livDea~~~G~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~ 252 (402)
T TIGR01821 175 -PNRPKIIAFESVYSMDGDIAPIEEICDLADKYGALTYLDEVHAVGLY-GPRGGGIAERDGLMHRIDIIEGTLAKAFGVV 252 (402)
T ss_pred -CCCCeEEEEcCCCCCCCCccCHHHHHHHHHHcCCEEEEeCccccccc-CCCCCccchhccCCCCCeEEEEechhhhccC
Confidence 12356889999999999999999999999999999999999984322 12111111 122 24688877899999865
Q ss_pred CcceEEEEeCchHHHHHhc-CCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLS-TNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~ 384 (486)
. |+++. +++... .+. ...+|.+. .+.. ....++.++++.+... .++.++..++++
T Consensus 253 G--G~i~~-~~~~~~-~l~~~~~~~~~t-----------------~~~~~~~~aaa~aaL~~~~~~--~~~~~~~~~~~~ 309 (402)
T TIGR01821 253 G--GYIAA-SRKLID-AIRSYAPGFIFT-----------------TSLPPAIAAGATASIRHLKES--QDLRRAHQENVK 309 (402)
T ss_pred C--ceeec-CHHHHH-HHHHhCcCceec-----------------CcCCHHHHHHHHHHHHHhhcC--HHHHHHHHHHHH
Confidence 3 55544 333332 221 11222110 1111 1122334455544222 445556678999
Q ss_pred HHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee----ECCEeEEEEEecCCCC
Q 041829 385 HFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV----LSGKYILRFAVGAPLT 460 (486)
Q Consensus 385 ~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~----~~~~~~lRi~~~~~~~ 460 (486)
++.+.|+++ +++++ ++..+++.+.+.. .....++.++|.++.++++.+.. ..+..++|+++ +..+
T Consensus 310 ~l~~~L~~~-g~~~~-~~~~~i~~i~~~~--------~~~a~~~~~~L~~~~Gi~v~~~~~p~~~~g~~~lRis~-~~~~ 378 (402)
T TIGR01821 310 RLKNLLEAL-GIPVI-PNPSHIVPVIIGD--------AALCKKVSDLLLNKHGIYVQPINYPTVPRGTERLRITP-TPAH 378 (402)
T ss_pred HHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------HHHHHHHHHHHHhcCCEEEEeECCCCCCCCCceEEEEe-CCCC
Confidence 999999987 77765 3455677665431 22345678887755336665532 23456899999 8889
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~l 479 (486)
|++||++++++|+++.+++
T Consensus 379 t~edi~~~~~~l~~~~~~~ 397 (402)
T TIGR01821 379 TDKMIDDLVEALLLVWDRL 397 (402)
T ss_pred CHHHHHHHHHHHHHHHHHc
Confidence 9999999999999987654
No 83
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.89 E-value=2.5e-20 Score=165.60 Aligned_cols=310 Identities=16% Similarity=0.151 Sum_probs=220.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
-|....+-.. +++++|++. .-+|.|+-++-+.+|.+... +++.|+++..+||+..-
T Consensus 60 kPpI~~F~~d----laeFlg~D~---------~R~t~GARe~KfavMhal~~-----------~gd~vV~D~~aHYttyv 115 (382)
T COG1103 60 KPPIKDFLED----LAEFLGMDE---------VRVTAGAREAKFAVMHALCK-----------EGDWVVVDSLAHYTTYV 115 (382)
T ss_pred CCcHHHHHHH----HHHHhCCce---------eeecccchhhHHHHHHHhcc-----------CCCEEEEcCcchHHHHH
Confidence 3444444444 899999986 68899999998888776554 78889999999999999
Q ss_pred HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCC-CccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 191 ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIG-LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 191 a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g-~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
+|...|+ ++..||-.....|.+++|...+.|++.++++ ..|.+..+|++....|.+.|.+++++||+++|+.+.+.
T Consensus 116 AAEragl---~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN 192 (382)
T COG1103 116 AAERAGL---NVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLN 192 (382)
T ss_pred HHHhcCC---eEEecCCCCCCceEecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEee
Confidence 9999999 9999996654569999999999999987664 77999999999999999999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+||..+-+.... +.. ++|+++.++||.+.+..+||++.++..- ....+..+..+..... --.+
T Consensus 193 ~AYt~Grmpvs~-ke~-----g~DFiVgSGHKsmAAs~PiGvl~~~eE~-ae~V~r~Sg~~~~~KE----------vell 255 (382)
T COG1103 193 CAYTVGRMPVSG-KEI-----GADFIVGSGHKSMAASAPIGVLAMSEEW-AEIVLRRSGRAFPKKE----------VELL 255 (382)
T ss_pred cceeeccccccc-ccc-----CCCEEEecCccchhccCCeeEEeehhHH-HHHHHhhcccccccce----------eeee
Confidence 999877665431 221 8999999999999998899999998752 2222333322221110 0123
Q ss_pred CCCCCCCc-HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEEEEEecCCCCCcccchHHHH
Q 041829 350 PLGRRFRS-LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 350 ~~sr~~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
.|+.+... ..+.+++-.. .+..+ +.++..+.+++|.+.|+++.|++.+. |-...++-|..+. ..++.+
T Consensus 256 GCT~rGapivTlmASfP~V-~eRVk-rWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~-------f~eIak 326 (382)
T COG1103 256 GCTVRGAPIVTLMASFPHV-VERVK-RWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPV-------FHEIAK 326 (382)
T ss_pred cccccCchHHHHHhcCHHH-HHHHH-HHHHHHHHHHHHHHHHHHhhhHHHhCCCCcccceeeecCch-------HHHHHH
Confidence 45543222 2222222221 33333 33556678999999999998888765 3333455554332 222222
Q ss_pred -------HHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 427 -------KLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 427 -------~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
-|.+.|.++|+.-+.+ .-..++.+++ ...++|+++..++++++++++
T Consensus 327 k~~r~gyFlY~ELK~RgI~GI~~---G~Tk~~K~sv--yGl~~Eqve~V~~afkeI~ek 380 (382)
T COG1103 327 KHKRKGYFLYEELKKRGIHGIQP---GQTKYFKLSV--YGLSWEQVEYVVDAFKEIAEK 380 (382)
T ss_pred hCcCCceeeHHHHHhcCcccccc---CceeEEEEEe--ecCCHHHHHHHHHHHHHHHHh
Confidence 2455666666433332 2235889988 567999999999999998875
No 84
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.88 E-value=2.6e-21 Score=174.16 Aligned_cols=303 Identities=16% Similarity=0.192 Sum_probs=209.8
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
..|...|....||++ +|+++|-+. |+|+.+||++|+.++++.... ++..|++.+.+|
T Consensus 50 dVyGeD~tt~rLE~~----vA~l~GKEA---------gLFv~SGTmgNllaIm~Hc~~----------rg~eii~gd~~H 106 (384)
T KOG1368|consen 50 DVYGEDPTTNRLEQR----VAELFGKEA---------GLFVPSGTMGNLLAIMVHCHQ----------RGSEIIVGDRAH 106 (384)
T ss_pred ccccCCccHHHHHHH----HHHHhCccc---------eeeecccccccHHHHHHHhcC----------CCceEEeccchh
Confidence 577888999999999 899999654 899999999999999987764 677899999999
Q ss_pred hhHHHHHH---HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH-h-CCCccEEEEEecCCcccc-ccCCh---HHHH
Q 041829 186 SALQKACQ---IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL-T-IGLIPFFLCATVGTTSST-AVDPL---LALG 256 (486)
Q Consensus 186 ~s~~~a~~---~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~-~-~g~~p~~vv~~~~~t~tG-~id~l---~~I~ 256 (486)
.-.++... +.|+ .++.|...+ ++.||++++|++++... . .+....+|++..-.+++| .+-|| .+|.
T Consensus 107 I~~~E~gg~s~l~gv---~~~tv~~e~--dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~ 181 (384)
T KOG1368|consen 107 IHRYEQGGISQLAGV---HVRTVKNEN--DGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVK 181 (384)
T ss_pred eeehhccChhhhccc---eeEeeeeCC--CCeeeHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHH
Confidence 77666443 4455 666666554 45999999999998432 1 123345777776666666 66665 5677
Q ss_pred HHHHHhCCEEEeeccccc--hh-ccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccc
Q 041829 257 NIAKSNGMWFHVDAAYAG--SA-CICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKN 333 (486)
Q Consensus 257 ~ia~~~g~~lhvD~A~g~--~~-~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~ 333 (486)
++|+++|+.+|+|||--. .. .-+| .+.. .+.+||+++...|.+++|. |-+++.+++.+.++ .+++.
T Consensus 182 ~lak~~glkLH~DGARi~NAavasgV~-vk~i---~~~fDSVsiCLSKglgAPV--GSViVG~k~FI~kA-----~~~RK 250 (384)
T KOG1368|consen 182 ALAKRHGLKLHMDGARIFNAAVASGVP-VKKI---CSAFDSVSICLSKGLGAPV--GSVIVGSKDFIDKA-----RHFRK 250 (384)
T ss_pred HHHhccCCeeecchhhhhhHHHHcCCC-HHHH---HHhhhhhhhhhhccCCCCc--ccEEEccHHHHHHH-----HHHHH
Confidence 789999999999998322 11 1122 1111 2368999999999999994 66677777655543 22221
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCceEEEEEec
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-RIFSLVCFRLL 412 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~~~~~v~f~~~ 412 (486)
.+.+|-|-...-+.+++-.+. +.+. .+++-++.|+.+.+.+++.+++++-.+ .+.|++.+.+.
T Consensus 251 --------------alGGGmRQsGvLaaaaLval~-~~~~-~L~~dHk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~ 314 (384)
T KOG1368|consen 251 --------------ALGGGMRQSGVLAAAALVALD-ENVP-LLRADHKRAKELAEYINTPEEIRVEVPAVETNIVNMVLC 314 (384)
T ss_pred --------------HhcCchhHHHHHHHHHHHHhh-cchH-HHHHHHHHHHHHHHHhccccceeeecchhhcceeeeecc
Confidence 123343333333333333332 2233 667778899999999998877887544 56777776654
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
... -....+.+.+.+.|...+.... ..+|+++ ++..|.++++.++..+++.
T Consensus 315 q~~-------~~~~~l~~~~~k~gi~lm~~~s----~r~Rivl-h~Qvt~~~ve~~~~~~~k~ 365 (384)
T KOG1368|consen 315 QAR-------LTAEELCKFLEKNGILLMGGAS----RRIRIVL-HHQVTDEDVEYVKSVLSKK 365 (384)
T ss_pred ccc-------CCHHHHHHHHHHCCeEEeeccc----cceEEEE-EEecCHHHHHHHHHHHHHH
Confidence 322 1226788888888866555432 2499999 9999999999999999543
No 85
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.88 E-value=7e-22 Score=193.66 Aligned_cols=285 Identities=16% Similarity=0.164 Sum_probs=184.1
Q ss_pred HHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCc-----------CccccccChhhHHHHHHHHHHHHHHcC
Q 041829 62 DIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNI-----------VGFSWITSPAATELEMIVLDWLAKLLK 130 (486)
Q Consensus 62 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~-----------~~~~~~~~~~~~~le~~~~~~la~l~g 130 (486)
.|.+....+...|+.|.+-+-..-...+ ++..+..++.. .....-..|.....| ..+.+|+.||
T Consensus 6 aL~~y~~~~~~~fh~PGHk~G~~~~~~p---~g~~~~~f~G~~~~~~Dl~te~~~lD~L~~p~G~I~e--Ae~~aA~~fG 80 (417)
T PF01276_consen 6 ALKKYAEEGPYSFHMPGHKGGRGFDKSP---AGRLFYDFFGENLFRADLSTEVPGLDDLHDPEGIIKE--AEELAARAFG 80 (417)
T ss_dssp HHHHHHHTT-EESSSSTTTTTTCGGGSH---HHHHHHHHH-HHHHHT---TTSTTCBBTTTTBTHHHH--HHHHHHHHHT
T ss_pred HHHHHHhCCCceeecCccCCCCCCCcch---HHHHHHHHHhhHHHHHHHhhcccccCcccCCccHHHH--HHHHHHHhcC
Confidence 6666777888889988776532111222 22222221111 111111233222222 3345999999
Q ss_pred CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC
Q 041829 131 LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS 210 (486)
Q Consensus 131 ~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~ 210 (486)
.+.+ -++++|+|.+|..++.++.. +++.|++++.+|.|+..++.+.|+ .+++++...+
T Consensus 81 Ad~t--------~flvnGsT~g~~a~i~a~~~-----------~gd~VLv~RN~HkSv~~alil~ga---~Pvyi~p~~~ 138 (417)
T PF01276_consen 81 ADKT--------FFLVNGSTSGNQAMIMALCR-----------PGDKVLVDRNCHKSVYNALILSGA---IPVYIPPEDN 138 (417)
T ss_dssp ESEE--------EEESSHHHHHHHHHHHHHTT-----------TTCEEEEETT--HHHHHHHHHHTE---EEEEEEEEE-
T ss_pred CCeE--------EEEecCchHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHHHHHcCC---eEEEecCCcc
Confidence 9886 58888888999888887765 788999999999999999999999 9998877522
Q ss_pred C---CCccCH-----HHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccc
Q 041829 211 T---NYSLSP-----DSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEY 282 (486)
Q Consensus 211 ~---~~~id~-----~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~ 282 (486)
. -+.+++ +.++++|++..... .|.+|++|.+| +.|.+-|+++|+++|+++|+.++||+|||+.+.+.+-.
T Consensus 139 ~~gi~~~i~~~~~~~~~i~~~l~~~p~~k-~~~~vvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp 216 (417)
T PF01276_consen 139 EYGIIGGISPDEFNEEDIEEALKEHPDAK-APRLVVLTSPT-YYGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLP 216 (417)
T ss_dssp TTS-BEEB-GGGGSHHHHHHHHHHCTTCH-CESEEEEESS--TTSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGG
T ss_pred ccCCccCCChhhhhHHHHHHHHHhCcccc-CceEEEEeCCC-CCeEEECHHHHHHHhcccCCEEEEEccccccccCCCCc
Confidence 1 124566 99999998764321 15567777764 78999999999999999999999999999988777433
Q ss_pred hhcccCCcCCC-------ceeeecccccCCCCcceEEEEeCch-----HHHHHh----cCCcccccccccccCCccCCCC
Q 041829 283 RQYIDGVEEAD-------SFNMNAHKWFLTNFDCSALWVKDRN-----TLIQSL----STNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 283 ~~~~~~~~~aD-------s~~~~~hK~l~~p~~~g~l~~r~~~-----~~~~~~----~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
+..+. -++| .++.+.||++.+..+++++.+++.. .+.+++ +.+|+|+...
T Consensus 217 ~~a~~--~gad~~~~~~~~vvqS~HKtL~altQts~lh~~~~~~v~~~~~~~~l~~~~TTSPSY~lmA------------ 282 (417)
T PF01276_consen 217 RSALA--LGADRPNDPGIIVVQSTHKTLPALTQTSMLHVKGDRIVDHERVNEALSMHQTTSPSYPLMA------------ 282 (417)
T ss_dssp TTCSS--TTSS-CTSBEEEEEEEHHHHSSS-TT-EEEEEETCCCTTHHHHHHHHHHHS-SS--HHHHH------------
T ss_pred cchhh--ccCccccccceeeeechhhcccccccceEEEecCCCcccHHHHHHHHHHHcCCChHHHHHH------------
Confidence 33221 2788 9999999999999999999999874 222222 2234443211
Q ss_pred CccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHH---hcCCCeEEecCC
Q 041829 347 WQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLV---AQDLRFEVVTPR 402 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l---~~~~~~~~~~~~ 402 (486)
.+=.+.+.+ +.+| ++++++..++++.+++.| ++.++|+++.++
T Consensus 283 ------------SlD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~i~~~~~~~~~~~~~~~ 329 (417)
T PF01276_consen 283 ------------SLDVARAQMEEEEG-RELLEEAIELAEEFRKKINRLNDIWGFKVLGPE 329 (417)
T ss_dssp ------------HHHHHHHHHSHHHH-HHHHHHHHHHHHHHHHHHHHHCCT-SSEESS-S
T ss_pred ------------HHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhcCCCceEecCCcc
Confidence 222333344 3344 567788888888999888 678888887643
No 86
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=1.3e-20 Score=189.99 Aligned_cols=308 Identities=13% Similarity=0.080 Sum_probs=197.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh-H
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-L 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-~ 188 (486)
..|...++|+.+.+.+++++|.+.. .++++|||.||+.++.+... +++.|+++...|.+ +
T Consensus 68 G~~~~~~lE~~~~~~la~l~g~~~a--------lv~~~SG~~A~~~~l~al~~-----------~GD~Vl~~~~~~~~~~ 128 (416)
T PRK13034 68 GCEFVDEVEALAIERAKQLFGCDYA--------NVQPHSGSQANGAVYLALLK-----------PGDTILGMSLSHGGHL 128 (416)
T ss_pred CChHHHHHHHHHHHHHHHHhCCCce--------EEecCCcHHHHHHHHHHhcC-----------CCCEEEEcCccceeee
Confidence 3477889998677779999998752 35578999999988876532 78899999999987 3
Q ss_pred HHHHHHhCCCCCCe--EEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 189 QKACQIGGIHPQNF--RVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 189 ~~a~~~~g~g~~~v--~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
...++....+. .+ +.++++.. ++.+|+++|++++++. +|.+|+++. +.+|..-|+++|.++|+++|+++
T Consensus 129 ~~g~~~~~~~~-~~~~~~~~~~~~-~~~~d~~~le~~l~~~-----~~klVi~~~--~~~g~~~dl~~l~~la~~~g~~l 199 (416)
T PRK13034 129 THGAKVSLSGK-WYNAVQYGVDRL-TGLIDYDEVEELAKEH-----KPKLIIAGF--SAYPRELDFARFREIADEVGALL 199 (416)
T ss_pred ecCCcceeccc-eeeeEEcccccc-cCCcCHHHHHHHHhhc-----CCeEEEECC--CccccccCHHHHHHHHHHcCCEE
Confidence 33333211111 22 34455443 3579999999988642 245665433 45788889999999999999999
Q ss_pred EeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 267 HVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
+||+||+.+....+.. ...+..+|.+++++||++.+|.| |+++..++..... ... +++..
T Consensus 200 ivD~Aha~G~~~~g~~---~~~~~~~Di~~~s~~K~l~g~~G-G~v~~~~~~~~~~-~~~---~~~~~------------ 259 (416)
T PRK13034 200 MVDMAHIAGLVAAGEH---PNPFPHAHVVTTTTHKTLRGPRG-GMILTNDEEIAKK-INS---AVFPG------------ 259 (416)
T ss_pred EEeCcccccCcccCCC---CCCCCCceEEEEeCcccCCCCCC-eEEEECcHHHHHH-HHh---hcCCc------------
Confidence 9999998766543321 11234699999999999988875 5666655432221 111 11110
Q ss_pred CccCCCCCCC-cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCceEEEEEecCCCCCcccchHH
Q 041829 347 WQIPLGRRFR-SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-RIFSLVCFRLLPPHNDEDHGNKL 424 (486)
Q Consensus 347 ~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~~~~~v~f~~~~~~~~~~~~~~~ 424 (486)
+..+..+. ..++..++...-.....++.++..+++++|++.|++. |+++..+ ++.+++.+.+.... ..
T Consensus 260 --~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~-G~~~~~~~~~t~i~~v~~~~~~-------~~ 329 (416)
T PRK13034 260 --LQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKER-GYDLVSGGTDNHLLLVDLRPKG-------LS 329 (416)
T ss_pred --ccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHc-CCEeccCCCCCcEEEEEcCCCC-------CC
Confidence 01111111 1122222222211233466789999999999999998 9998743 56677777664321 11
Q ss_pred HHHHHHHHHccCcEEEEeee-------ECCEeEEEEEecCC----CCCHHHHHHHHHHHHHHHH
Q 041829 425 NHKLLDDINSTGKIFISHTV-------LSGKYILRFAVGAP----LTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 425 ~~~l~~~l~~~g~~~~~~~~-------~~~~~~lRi~~~~~----~~t~~di~~~~~~l~~~~~ 477 (486)
...+.+.|.+.| +++.... ......+|+++ +. ..+++||++++++|.++..
T Consensus 330 ~~~~~~~L~~~G-I~v~~~~~p~~~~~p~~~~~lR~~~-~~~t~~~~~~~di~~l~~~l~~~~~ 391 (416)
T PRK13034 330 GKDAEQALERAG-ITVNKNTVPGDTESPFVTSGIRIGT-PAGTTRGFGEAEFREIANWILDVLD 391 (416)
T ss_pred HHHHHHHHHhCC-cEEeccCCCCCCcCCCCCCeeEeCc-HHHHhCCCCHHHHHHHHHHHHHHHh
Confidence 134446666677 4444311 11134799997 55 5679999999999998865
No 87
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.88 E-value=1.6e-19 Score=186.10 Aligned_cols=334 Identities=12% Similarity=0.094 Sum_probs=216.5
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
...|....+..++.+++.+|+.+..|.+.+ ..+.++|+|+++++..++.+.... +++.|+++..+
T Consensus 108 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~----------~gD~Vlv~~P~ 172 (481)
T PTZ00377 108 TGAYTDSAGYPFVRKAVAAFIERRDGVPKD-----PSDIFLTDGASSGIKLLLQLLIGD----------PSDGVMIPIPQ 172 (481)
T ss_pred ccCcCcccCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcCCHHHHHHHHHHHhccC----------CCCEEEECCCC
Confidence 345777778899999999999988786543 136899999999988877665411 67889999999
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKS 261 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~ 261 (486)
+..+...++..|. +++.||++++++|.+|+++|++++++..+++.++.+|+++.++||||.+-+ +++|+++|++
T Consensus 173 y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~ 249 (481)
T PTZ00377 173 YPLYSAAITLLGG---KQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYE 249 (481)
T ss_pred chhHHHHHHHcCC---EEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 999999987656899999999999865444445677888899999999977 8899999999
Q ss_pred hCCEEEeeccccchhccC-ccc---hhcccCCcC-----CCce-eeecccccC--CCCcceEEEEe--CchHHHHHhcCC
Q 041829 262 NGMWFHVDAAYAGSACIC-PEY---RQYIDGVEE-----ADSF-NMNAHKWFL--TNFDCSALWVK--DRNTLIQSLSTN 327 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~-~~~---~~~~~~~~~-----aDs~-~~~~hK~l~--~p~~~g~l~~r--~~~~~~~~~~~~ 327 (486)
+|+|+++|.+|+...+.. ..+ .....++.. ...+ ..++.|.++ ...-+|++++. +++.+.......
T Consensus 250 ~~~~iI~De~Y~~l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~ 329 (481)
T PTZ00377 250 KGIVLMADEVYQENIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLA 329 (481)
T ss_pred CCCEEEEehhhHhhccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHh
Confidence 999999999997643311 111 111111111 1133 346799753 34568988762 444333221111
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-----Chh-------hHHHHHHHHHHHHHHHHHHHhcCCC
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-----GLE-------NLQGYIRNHIQLAKHFEGLVAQDLR 395 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-----g~~-------g~~~~~~~~~~~a~~l~~~l~~~~~ 395 (486)
..++ +. ..+...++...+ +.. .+++..++..++++.+.+.|+++++
T Consensus 330 ~~~~-------------------~~---~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~g 387 (481)
T PTZ00377 330 SINL-------------------CS---NVVGQLMTGLMCNPPREGDASYPLYKRERDAIFTSLKRRAELLTDELNKIEG 387 (481)
T ss_pred heec-------------------CC---ChHHHHHHHHHhCCCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 1111 00 112222222222 111 1223333456778888999999989
Q ss_pred eEEecCCCceEEEE-Eec-CCCCCc----ccchHHHHHHHHH-HHccCcEEEEeeeEC---CEeEEEEEecCCCCCHHHH
Q 041829 396 FEVVTPRIFSLVCF-RLL-PPHNDE----DHGNKLNHKLLDD-INSTGKIFISHTVLS---GKYILRFAVGAPLTEWRHV 465 (486)
Q Consensus 396 ~~~~~~~~~~~v~f-~~~-~~~~~~----~~~~~~~~~l~~~-l~~~g~~~~~~~~~~---~~~~lRi~~~~~~~t~~di 465 (486)
+++. +|..+++.| ++. +..... ..... ...++.. +.+.|..++.+..+. +..++|+++ . ++++++
T Consensus 388 ~~~~-~p~gg~fl~~~~~l~~~~~~~~~~~~~~~-~~~~~~~ll~~~gV~v~pG~~F~~~~~~~~~Rls~-~--~~~e~l 462 (481)
T PTZ00377 388 VSCQ-PVEGAMYAFPRIELPEKAIQEAKERGLAP-DVLYCLELLESTGIVVVPGSGFGQKPGTYHFRITI-L--PPEEQI 462 (481)
T ss_pred cEee-cCCeeEEEEeeccCchhhHHHHHhcCCCc-HHHHHHHHHHHcCEEEeCCcccCCCCCCCEEEEEE-C--CCHHHH
Confidence 8876 555555544 332 111000 00000 1223333 445565555444443 346899999 3 578999
Q ss_pred HHHHHHHHHHHHHHHHhh
Q 041829 466 NAAWEVMQDKASALLARL 483 (486)
Q Consensus 466 ~~~~~~l~~~~~~l~~~~ 483 (486)
++.+++|.++.++..+++
T Consensus 463 ~~~l~rl~~~~~~~~~~~ 480 (481)
T PTZ00377 463 EEMVKKIKEFHESFMKKY 480 (481)
T ss_pred HHHHHHHHHHHHHHHHhh
Confidence 999999999999888765
No 88
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.88 E-value=1e-19 Score=183.69 Aligned_cols=329 Identities=14% Similarity=0.081 Sum_probs=214.1
Q ss_pred HHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCC-CCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 93 LGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQ-GGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 93 ~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~-~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
+.+.+...++.. ...|....+..++.+.+.+|+++.+|.+.+ . ...++|+|+++++..++.+..+
T Consensus 58 ~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~-----~~~~I~it~Ga~~al~~~~~~l~~-------- 124 (405)
T PRK06207 58 AFELFSAGVERGGVQAYTEYRGDADIRELLAARLAAFTGAPVD-----AADELIITPGTQGALFLAVAATVA-------- 124 (405)
T ss_pred HHHHHHHHHhcCCCccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCCEEEeCCcHHHHHHHHHHhcC--------
Confidence 333333444332 234655567889999999999999996432 1 2589999999988777665433
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCC---CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTD---SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST 247 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~---~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG 247 (486)
+++.|++...+|+.+...++.+|. +++.||++ .++++.+|+++|++++++. +.+|+++.++|+||
T Consensus 125 ---~Gd~Vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG 192 (405)
T PRK06207 125 ---RGDKVAIVQPDYFANRKLVEFFEG---EMVPVQLDYLSADKRAGLDLDQLEEAFKAG------VRVFLFSNPNNPAG 192 (405)
T ss_pred ---CCCEEEEeCCCchhHHHHHHHcCC---EEEEEeccccCcccCCCcCHHHHHHhhhhc------CeEEEECCCCCCCC
Confidence 678899999999999999999999 99999986 2334799999999988654 34788899999999
Q ss_pred ccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CCC--ceeeecccccCCC-CcceEEEEeCchHH
Q 041829 248 AVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EAD--SFNMNAHKWFLTN-FDCSALWVKDRNTL 320 (486)
Q Consensus 248 ~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~ 320 (486)
.+-+ +++|+++|+++|+++++|.+|+-+.+....+... ..+. ..| .++.++.|.++.| .-+|+++.. +..+
T Consensus 193 ~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~~~~-~~~~~~~~~vi~i~SfSK~~~lpGlRiG~ii~~-~~l~ 270 (405)
T PRK06207 193 VVYSAEEIAQIAALARRYGATVIVDQLYSRLLYDGTSYTHL-RALPIDPENVITIMGPSKTESLSGYRLGVAFGS-PAII 270 (405)
T ss_pred cCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCch-hcCCCCcCcEEEEecchhhccCcccceEEEEcC-HHHH
Confidence 9966 7788999999999999999998654322111111 1111 112 4566789999855 348887653 3333
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
. .+.....+... + ...+...++...+ +...+++.+++..+.++.+.+.|++++++++
T Consensus 271 ~-~~~~~~~~~~~-----------------~---~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~ 329 (405)
T PRK06207 271 D-RMEKLQAIVSL-----------------R---AAGYSQAVLRTWFSEPDGWMKDRIARHQAIRDDLLRVLRGVEGVFV 329 (405)
T ss_pred H-HHHHHHhHhcc-----------------C---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCcee
Confidence 2 22211111100 0 0111122222222 3344677788888888999999998888876
Q ss_pred ecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 399 VTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 399 ~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
..+.....+.+++.+.. .+ ..++.+.|. +.|..+..+..+. +.+++|+++ .. +.++++..+++|.++
T Consensus 330 ~~p~gg~fl~~~l~~~~-----~~--~~~~~~~l~~~~gV~v~pG~~F~~~~~~~~Ris~-~~--~~~~l~~al~rl~~~ 399 (405)
T PRK06207 330 RAPQAGSYLFPRLPRLA-----VS--LHDFVKILRLQAGVIVTPGTEFSPHTADSIRLNF-SQ--DHAAAVAAAERIAQL 399 (405)
T ss_pred cCCCeeEEEEEeCcccC-----CC--HHHHHHHHHHhcCEEEeCchHhCCCCCCeEEEEe-cC--CHHHHHHHHHHHHHH
Confidence 53333344455554211 11 245677776 4564444333332 346999999 33 688999999999887
Q ss_pred HHHH
Q 041829 476 ASAL 479 (486)
Q Consensus 476 ~~~l 479 (486)
.+++
T Consensus 400 l~~~ 403 (405)
T PRK06207 400 IERY 403 (405)
T ss_pred HHHh
Confidence 7654
No 89
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.88 E-value=1.1e-20 Score=191.82 Aligned_cols=307 Identities=14% Similarity=0.053 Sum_probs=196.4
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
.+....+|+.+++++++++|.+.. .+++++||+++..++.+... +++.|+++..+|.++..
T Consensus 66 ~~~~~~~e~~~~~~la~~~g~~~~--------~i~~~sgt~al~~~l~~l~~-----------~gd~Vl~~~~~~~~~~~ 126 (416)
T PRK00011 66 CEYVDVVEQLAIDRAKELFGAEYA--------NVQPHSGSQANAAVYFALLK-----------PGDTILGMDLAHGGHLT 126 (416)
T ss_pred chHHHHHHHHHHHHHHHHhCCCce--------eeecCCchHHHHHHHHHhcC-----------CCCEEEEeccccCCccc
Confidence 345677888788899999998763 35555678888776655422 67789899888865432
Q ss_pred ---HH--HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 191 ---AC--QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 191 ---a~--~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
.. ...|+ +++.+|++.+ ++.+|+++|++++++.. |.+|+++. +.+|...|+++|+++|+++|++
T Consensus 127 ~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~-----~k~v~~~~--~~~~~~~~~~~I~~la~~~~~~ 195 (416)
T PRK00011 127 HGSPVNFSGKLY---NVVSYGVDEE-TGLIDYDEVEKLALEHK-----PKLIIAGA--SAYSRPIDFKRFREIADEVGAY 195 (416)
T ss_pred ccccccccccee---eEeecCcCcc-cCCcCHHHHHHHHHhcC-----CCEEEECC--CcCCCccCHHHHHHHHHHcCCE
Confidence 11 12244 7778888743 37999999999997521 33555542 4567778999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|+||+.+.......... +..+|.++.++||++.+|. .|+++..++....+.......+..
T Consensus 196 livD~a~~~g~~~~g~~~~~---~~~~di~~~S~~K~l~g~~-gg~i~~~~~~~~~~l~~~~~~~~~------------- 258 (416)
T PRK00011 196 LMVDMAHIAGLVAAGVHPSP---VPHADVVTTTTHKTLRGPR-GGLILTNDEELAKKINSAVFPGIQ------------- 258 (416)
T ss_pred EEEECcchhcccccCccCCC---CCCCcEEEecCCcCCCCCC-ceEEEeCCHHHHHHHHHHhCcccc-------------
Confidence 99999986544322111111 2268999999999997765 466666554433322111111111
Q ss_pred CCccCCCCCC-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEecCCCCCcccchH
Q 041829 346 DWQIPLGRRF-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 346 ~~~~~~sr~~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~ 423 (486)
.+... ...+++.++.....+++++++++..++++++++.|++. |+++.. .+..+++.+.+.+.. .
T Consensus 259 -----~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~~~~~~~~~~~i~~~~~~-----~-- 325 (416)
T PRK00011 259 -----GGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAER-GFRVVSGGTDNHLVLVDLRSKG-----L-- 325 (416)
T ss_pred -----CCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhC-CCeeeecCCCCeEEEEeCcccC-----C--
Confidence 00011 11233344444445678889999999999999999997 888763 234466666664321 1
Q ss_pred HHHHHHHHHHccCcEEEEee--eE-----CCEeEEEEEecC---CCCCHHHHHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINSTGKIFISHT--VL-----SGKYILRFAVGA---PLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 424 ~~~~l~~~l~~~g~~~~~~~--~~-----~~~~~lRi~~~~---~~~t~~di~~~~~~l~~~~~~ 478 (486)
....+.+.|.+.|. .+... .+ .....+|++... ...|++|+++++++|+++...
T Consensus 326 ~~~~~~~~L~~~GI-~v~~~~~p~~~~~~~~~~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 326 TGKEAEAALEEANI-TVNKNAVPFDPRSPFVTSGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CHHHHHHHHHHcCc-EEccCcCCCCCCCCCCCCceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 11456677777774 34311 11 123468986411 245799999999999987543
No 90
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.88 E-value=4.4e-20 Score=186.95 Aligned_cols=298 Identities=15% Similarity=0.087 Sum_probs=195.7
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...++|++ +++++|.+. .+++++|++||..++....... ++++|+++...|.++..++
T Consensus 92 ~~~~Le~~----la~~~g~~~---------~i~~~sG~~a~~~~i~~l~~~~---------~g~~vi~~~~~h~s~~~~~ 149 (410)
T PRK13392 92 PHVLLERE----LADLHGKES---------ALLFTSGYVSNDAALSTLGKLL---------PGCVILSDALNHASMIEGI 149 (410)
T ss_pred HHHHHHHH----HHHHhCCCC---------EEEECcHHHHHHHHHHHHhcCC---------CCCEEEEehhhhHHHHHHH
Confidence 44556655 899999643 5777778989888776432110 4567888888999999988
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
+..|. ++..++.+ |.+.+++.+++.. ..++.+|+++.++|++|.+-|+++|.++|+++|+++++|+||
T Consensus 150 ~~~g~---~~~~~~~~-------d~~~l~~~l~~~~--~~~t~~v~i~~~~n~tG~~~~l~~i~~l~~~~~~~livDea~ 217 (410)
T PRK13392 150 RRSGA---EKQVFRHN-------DLADLEEQLASVD--PDRPKLIAFESVYSMDGDIAPIEAICDLADRYNALTYVDEVH 217 (410)
T ss_pred HHcCC---eEEEEeCC-------CHHHHHHHHHhcc--CCCCEEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEECCc
Confidence 88888 77766532 6677777776432 123568999999999999999999999999999999999999
Q ss_pred cchhccCccchhcc--cC-CcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 273 AGSACICPEYRQYI--DG-VEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 273 g~~~~~~~~~~~~~--~~-~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+.+.+ .+...... .+ .+..|.++.+++|+++.+. |++.. +++.+........+|....
T Consensus 218 ~~g~~-g~~g~g~~~~~~~~~~~div~~tlsK~~g~~G--G~~~~-~~~~~~~l~~~~~~~~~s~--------------- 278 (410)
T PRK13392 218 AVGLY-GARGGGIAERDGLMDRIDMIQGTLAKAFGCLG--GYIAA-SADLIDFVRSFAPGFIFTT--------------- 278 (410)
T ss_pred cccCc-CCCCCchhhhccCCCCCcEEEEEChHhhhccc--chhhc-CHHHHHHHHHhCcchhccC---------------
Confidence 84332 12111111 11 2357888889999998763 55543 4443332222222332111
Q ss_pred CCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHH
Q 041829 350 PLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLL 429 (486)
Q Consensus 350 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 429 (486)
...+....++..+++.... ..+..++..++++++.+.|++. |+++. ++..+++.+.+.. .....++.
T Consensus 279 -~~~~~~~~a~~aaL~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~i~~~~--------~~~~~~~~ 345 (410)
T PRK13392 279 -ALPPAVAAGATAAIRHLKT--SQTERDAHQDRVAALKAKLNAN-GIPVM-PSPSHIVPVMVGD--------PTLCKAIS 345 (410)
T ss_pred -cCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEeCC--------HHHHHHHH
Confidence 0001112334455554322 2344567788899999999987 78765 4556666555431 22345678
Q ss_pred HHHHc-cCcEEEEeee----ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 430 DDINS-TGKIFISHTV----LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 430 ~~l~~-~g~~~~~~~~----~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
++|.+ .| +++.+.. ..+..++|+++ +...|++|+++++++|+++.++
T Consensus 346 ~~L~~~~G-I~v~~~~~p~~~~~~~~lRis~-~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 346 DRLMSEHG-IYIQPINYPTVPRGTERLRITP-TPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred HHHHHhCC-EEEeeeCCCCCCCCCceEEEEE-CCCCCHHHHHHHHHHHHHHHHH
Confidence 88864 56 5655432 23456899999 7788999999999999988764
No 91
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.88 E-value=9.3e-20 Score=184.53 Aligned_cols=338 Identities=14% Similarity=0.074 Sum_probs=212.1
Q ss_pred cCCCCcccccCCCCCCHHHHHHHHHHHhcCcCc-c--ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCch
Q 041829 73 HWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVG-F--SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTA 149 (486)
Q Consensus 73 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~-~--~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~gg 149 (486)
.+.+-.|+|+-+. |.....+.+.+..+-...+ . .+...+...++|++ +++++|.+. .+++++|
T Consensus 50 ~~~s~dylgl~~~-p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~l~~~----la~~~g~~~---------~~~~~sG 115 (407)
T PRK09064 50 VWCSNDYLGMGQH-PKVIEAMIEALDRCGAGAGGTRNISGTNHYHVELERE----LADLHGKEA---------ALVFTSG 115 (407)
T ss_pred EEECCCCcCCCCC-HHHHHHHHHHHHHcCCCCCCcCcCccCHHHHHHHHHH----HHHHhCCCc---------EEEECcH
Confidence 3455668887432 2233333343333211111 1 11123445555555 888888543 5777778
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh
Q 041829 150 SEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT 229 (486)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~ 229 (486)
++||..++..++... ++.+|+.+...|.++...++..|. ++..++. .|+++|++.++...
T Consensus 116 ~~an~~ai~~l~~~~---------~~~~i~~~~~~h~s~~~~~~~~~~---~~~~~~~-------~d~~~le~~l~~~~- 175 (407)
T PRK09064 116 YVSNDATLSTLAKLI---------PDCVIFSDELNHASMIEGIRRSRC---EKHIFRH-------NDVAHLEELLAAAD- 175 (407)
T ss_pred HHHHHHHHHHHhCCC---------CCCEEEEeCcchHHHHHHHHHcCC---cEEEECC-------CCHHHHHHHHHhcc-
Confidence 999998887654321 456777787889999888888887 6655542 38899998886431
Q ss_pred CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCC-cCCCceeeecccccCCC
Q 041829 230 IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGV-EEADSFNMNAHKWFLTN 306 (486)
Q Consensus 230 ~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~-~~aDs~~~~~hK~l~~p 306 (486)
..++.+|+++.+.+++|.+.|+++|.++|+++|++++||+||+.+.+ .+..... ..++ +..|.++.+++|.++.+
T Consensus 176 -~~~~~~v~~~~v~s~~G~~~~l~~i~~l~~~~~~~livDEa~~~G~~-g~~g~g~~~~~~~~~~~div~~t~sKa~g~~ 253 (407)
T PRK09064 176 -PDRPKLIAFESVYSMDGDIAPIAEICDLADKYNALTYLDEVHAVGMY-GPRGGGIAERDGLMDRIDIIEGTLAKAFGVM 253 (407)
T ss_pred -CCCCeEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEECCCccccc-CCCCCChHHhcCCCCCCeEEEEecchhhhcc
Confidence 12356899999999999999999999999999999999999973321 1211111 1122 34688888999998754
Q ss_pred CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCC-CCCcHHHHHHHHHhChhhHHHHHHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGR-RFRSLKLWMVLRLYGLENLQGYIRNHIQLAKH 385 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr-~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 385 (486)
. |+++. +++.+........+|.. ..+. ...+.++..+++.+... ....++..+++++
T Consensus 254 G--G~~~~-~~~~~~~l~~~~~~~~~-----------------t~~~~~~~~~aa~~al~~~~~~--~~~~~~~~~~~~~ 311 (407)
T PRK09064 254 G--GYIAG-SAALVDAVRSYAPGFIF-----------------TTSLPPAIAAAALASIRHLKES--NEERERHQERAAK 311 (407)
T ss_pred C--ceEec-CHHHHHHHHHhCccccc-----------------cCcCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHH
Confidence 2 65554 33333221111222221 1111 11223444555554322 3345778889999
Q ss_pred HHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCC
Q 041829 386 FEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTE 461 (486)
Q Consensus 386 l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t 461 (486)
+.+.|++. |++++. +..+++.+.+.. .....++.++|.++.++++.+... .+..++|+++ +..+|
T Consensus 312 l~~~L~~~-g~~~~~-~~~~iv~i~~~~--------~~~~~~l~~~L~~~~gi~v~~~~~p~~~~~~~~lRis~-~~~~t 380 (407)
T PRK09064 312 LKAALDAA-GIPVMP-NESHIVPVMVGD--------PEKCKKASDMLLEEHGIYVQPINYPTVPRGTERLRITP-TPFHT 380 (407)
T ss_pred HHHHHHHc-CCCCCC-CCCCEEEEEeCC--------HHHHHHHHHHHHHhCCEEEeeECCCCCCCCCceEEEEe-CCCCC
Confidence 99999986 787663 445667666531 123456777776553355554321 2446899999 88899
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 041829 462 WRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 462 ~~di~~~~~~l~~~~~~l 479 (486)
++|+++++++|+++.+++
T Consensus 381 ~edi~~l~~~l~~~~~~~ 398 (407)
T PRK09064 381 DEMIDHLVEALVEVWARL 398 (407)
T ss_pred HHHHHHHHHHHHHHHHHc
Confidence 999999999999987654
No 92
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.88 E-value=3.9e-21 Score=189.93 Aligned_cols=336 Identities=14% Similarity=0.036 Sum_probs=214.5
Q ss_pred cCCCCCCHHHHHHHHHHHhcC----cCccc---cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEc-CchhHHH
Q 041829 82 YYPSNSSVAGFLGEMLSAGLN----IVGFS---WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQ-GTASEAV 153 (486)
Q Consensus 82 ~~~~~~~~~~~~~~~l~~~~n----~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t-~ggt~a~ 153 (486)
+.|++...+..+-+.+...+. ..... ...++.+.++-+++.+.+++++|.+.++ ..+++ ++||.++
T Consensus 7 ~~pGP~~~p~~V~~a~~~~~~~~~~~~~g~~~~~hr~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgt~~~ 80 (360)
T PRK05355 7 FSAGPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRSKEFEAVAEEAEADLRELLNIPDNY------KVLFLQGGASLQF 80 (360)
T ss_pred ccCCCCCCCHHHHHHHHHHhhccccCCccccccCCCCHHHHHHHHHHHHHHHHHhCCCCCc------EEEEEcCCchHHH
Confidence 456666666666555554431 11111 2345667789999999999999985432 24455 5566555
Q ss_pred HHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHH-HHHHHHhCCC
Q 041829 154 LVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAE-AISRDLTIGL 232 (486)
Q Consensus 154 ~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~-~i~~~~~~g~ 232 (486)
-.++..... .|.+.++|..+...|.. .+.++.+|. . ..++.++. .+..+..++++ +++++
T Consensus 81 Ea~~~nl~~--------~g~~~l~i~~G~fg~r~-~~~a~~~g~---~-~~~~~~~~-~g~~~~~~~~~~~l~~~----- 141 (360)
T PRK05355 81 AMVPMNLLG--------GGKKADYVDTGSWSKKA-IKEAKKYGE---V-NVAASSED-DGFTYIPPLDEWQLSDD----- 141 (360)
T ss_pred HHHHHhcCC--------CCCeEEEEECCHHHHHH-HHHHHHhCC---c-eEEecccc-cCCCCCCChhhccCCCC-----
Confidence 544443221 11133444445444544 677777887 5 55665531 13555555555 55432
Q ss_pred ccEEEEEecCCccccccC-ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceE
Q 041829 233 IPFFLCATVGTTSSTAVD-PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSA 311 (486)
Q Consensus 233 ~p~~vv~~~~~t~tG~id-~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~ 311 (486)
+.+|.+++..|.||... ||++| +|++++||++++.+....+- +..|.+++++||+++ |.|.|+
T Consensus 142 -~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv--------~~~d~~~~ssqK~lg-P~Glg~ 205 (360)
T PRK05355 142 -AAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTI 205 (360)
T ss_pred -CCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCH--------HHccEEEEecccccc-CCceEE
Confidence 46899999999999997 78777 89999999998877655432 145799999999986 999999
Q ss_pred EEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHH
Q 041829 312 LWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGL 389 (486)
Q Consensus 312 l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~ 389 (486)
++++++. +.+.-...+.|+...... ......++.. ....++..+++.+-.+ |++++.+++.++++++++.
T Consensus 206 l~~s~~~-l~~~~~~~~~~~~~~~~~-------~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~l~~~ 277 (360)
T PRK05355 206 VIVREDL-LGRALPSIPSMLDYKTHA-------DNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAALLYDA 277 (360)
T ss_pred EEECHHH-HhhcccCCChHHHHHHHH-------hcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHH
Confidence 9999864 322111112222211000 0001112212 2335777788888778 8999999999999999999
Q ss_pred HhcCCCeEEecC--CCc-eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHH
Q 041829 390 VAQDLRFEVVTP--RIF-SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 390 l~~~~~~~~~~~--~~~-~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~ 466 (486)
|++++.+..+.+ ... .+++|.+.. ..+..++.+.+.++|..+ .... ...+.+|+|+ .+++|++||+
T Consensus 278 l~~~~~~~~~~~~~~rs~~v~sf~~~~--------~~~~~~~~~~~~~~Gi~~-~~~~-~~~g~vRiS~-~~~nt~eei~ 346 (360)
T PRK05355 278 IDSSDFYRNPVAPEDRSRMNVPFTLAD--------EELDKKFLAEAKAAGLVG-LKGH-RSVGGMRASI-YNAMPLEGVQ 346 (360)
T ss_pred HHhCCCcccCCChhhcCCcEEEEEcCC--------hHHHHHHHHHHHHCCCcc-cCCC-CccCcEEEEC-CCCCCHHHHH
Confidence 999964333322 123 468888753 122355667777888664 2222 2236899999 8899999999
Q ss_pred HHHHHHHHHHH
Q 041829 467 AAWEVMQDKAS 477 (486)
Q Consensus 467 ~~~~~l~~~~~ 477 (486)
+++++|+++..
T Consensus 347 ~l~~~l~~~~~ 357 (360)
T PRK05355 347 ALVDFMKEFER 357 (360)
T ss_pred HHHHHHHHHHH
Confidence 99999998754
No 93
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.88 E-value=1.8e-21 Score=187.76 Aligned_cols=228 Identities=15% Similarity=0.082 Sum_probs=157.8
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+.|+. +++++|.+.. .++++|+|+++..++.+... +++.|+++..+|.|+..++.
T Consensus 61 i~~~~~~----~A~~~ga~~~--------~~~~~Gst~a~~~~l~al~~-----------~gd~Vlv~~~~h~s~~~~~~ 117 (294)
T cd00615 61 IKEAQEL----AARAFGAKHT--------FFLVNGTSSSNKAVILAVCG-----------PGDKILIDRNCHKSVINGLV 117 (294)
T ss_pred HHHHHHH----HHHHhCCCCE--------EEEcCcHHHHHHHHHHHcCC-----------CCCEEEEeCCchHHHHHHHH
Confidence 3444444 8999997653 45588889999887766543 67889999999999999999
Q ss_pred HhCCCCCCeEEEeCCCCCC----CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 194 IGGIHPQNFRVLKTDSSTN----YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~----~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
..|+ +++.++.+.+.+ +.+|++++++++++.. .+.+|+++.+ |++|.+.|+++|+++|+++|++++||
T Consensus 118 ~~g~---~~~~v~~~~~~~~~~~~~i~~~~l~~~l~~~~----~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livD 189 (294)
T cd00615 118 LSGA---VPVYLKPERNPYYGIAGGIPPETFKKALIEHP----DAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVD 189 (294)
T ss_pred HCCC---EEEEecCccCcccCcCCCCCHHHHHHHHHhCC----CceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEE
Confidence 9998 899988765432 3799999999997532 2567888876 68999999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+||++...+.+..+.... ..++|.++.++||++.+|.++|++++++.......+..... +.
T Consensus 190 eA~~~~~~~~~~~~~~~~-~~~~div~~S~hK~l~g~~~~~~l~~~~~~~~~~~~~~~~~-~~----------------- 250 (294)
T cd00615 190 EAHGAHFRFHPILPSSAA-MAGADIVVQSTHKTLPALTQGSMIHVKGDLVNPDRVNEALN-LH----------------- 250 (294)
T ss_pred CcchhhhccCcccCcchh-hcCCcEEEEchhcccchHhHHHHHHhCCCcCCHHHHHHHHH-HH-----------------
Confidence 999876544433221111 12799999999999988888888888765211111111000 00
Q ss_pred CCCCC-C-CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 350 PLGRR-F-RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 350 ~~sr~-~-~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
+.+.+ . ...++-.+++.+..+| .+++++..+++++++++|.+
T Consensus 251 ~ttsps~~~~asl~~a~~~~~~~g-~~~~~~~~~~~~~~r~~l~~ 294 (294)
T cd00615 251 QSTSPSYLILASLDVARAMMALEG-KELVEELIELALYARQEINK 294 (294)
T ss_pred CCCCcHHHHHHHHHHHHHHHHHHh-HHHHHHHHHHHHHHHHHHhC
Confidence 11111 1 1123333444343344 45677888899999988753
No 94
>PRK07324 transaminase; Validated
Probab=99.88 E-value=5.9e-20 Score=183.40 Aligned_cols=317 Identities=11% Similarity=0.045 Sum_probs=203.9
Q ss_pred HHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCC
Q 041829 96 MLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEK 175 (486)
Q Consensus 96 ~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~ 175 (486)
.+...+......|....+..++++.+.+|+. +.+++ +.++|+|+++++..++.+..+ ++
T Consensus 46 ~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~---~~~~~-------~vi~t~G~~~al~~~~~~l~~-----------~g 104 (373)
T PRK07324 46 AFYQELGQKKLTYGWIEGSPEFKEAVASLYQ---NVKPE-------NILQTNGATGANFLVLYALVE-----------PG 104 (373)
T ss_pred HHHHHHhcCCccCCCCCCCHHHHHHHHHHhc---CCChh-------hEEEcCChHHHHHHHHHHhCC-----------CC
Confidence 3333345444566666677888888544432 34443 589999999998888766533 67
Q ss_pred eEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---h
Q 041829 176 LVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---L 252 (486)
Q Consensus 176 ~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l 252 (486)
+.|+++..+|.++...++..|. +++.+|++.+++|.+|+++|+++++++ +.+|+++.++|+||.+-+ +
T Consensus 105 d~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~kli~i~~p~NPtG~~~~~~~l 175 (373)
T PRK07324 105 DHVISVYPTYQQLYDIPESLGA---EVDYWQLKEENGWLPDLDELRRLVRPN------TKLICINNANNPTGALMDRAYL 175 (373)
T ss_pred CEEEEcCCCchhHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhCCCC------CcEEEEeCCCCCCCCCCCHHHH
Confidence 7888899999999999999999 999999987555789999998887543 347889999999999977 8
Q ss_pred HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccc
Q 041829 253 LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 253 ~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
++|+++|+++|+++++|++|...... +....... ...-.....++.|.++.| ..+|+++. ++..+.. +.....+.
T Consensus 176 ~~i~~~a~~~~~~ii~De~y~~l~~~-~~~~s~~~-~~~~~I~~~s~SK~~~~~G~RiG~i~~-~~~li~~-~~~~~~~~ 251 (373)
T PRK07324 176 EEIVEIARSVDAYVLSDEVYRPLDED-GSTPSIAD-LYEKGISTNSMSKTYSLPGIRVGWIAA-NEEVIDI-LRKYRDYT 251 (373)
T ss_pred HHHHHHHHHCCCEEEEEccccccccC-CCCCChhh-ccCCEEEEecchhhcCCccceeEEEec-CHHHHHH-HHHHhCcE
Confidence 99999999999999999999764321 11111111 111124455788988754 34788876 4443332 22111111
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC--hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEE-E
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG--LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLV-C 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v-~ 408 (486)
. + + ...+..+++...+. ..-+++..+...++.+.+.+.|++.+++..+. |..+.. .
T Consensus 252 ~----------------~-~---~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~-p~gg~~~~ 310 (373)
T PRK07324 252 M----------------I-C---AGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVK-PKAVSTSF 310 (373)
T ss_pred E----------------e-c---CChHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEC-CCceEEEE
Confidence 0 0 0 11222233333321 23445555666677888889998888887664 443333 3
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
+++.. . . ...++.+++.+ .|.....+..+...+++|+++ . .+++.+++.+++|.+++++
T Consensus 311 i~~~~-~-----~--~~~~~~~~ll~~~gv~v~pg~~F~~~~~iRis~-~--~~~~~l~~~l~rl~~~l~~ 370 (373)
T PRK07324 311 VKLDV-D-----M--PSEDFCLKLLKETGVLLVPGNRFDLEGHVRIGY-C--CDTETLKKGLKKLSEFLRE 370 (373)
T ss_pred EEeCC-C-----C--CHHHHHHHHHHhcCEEEECccccCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHh
Confidence 33332 1 1 12456777654 464444444454456999999 3 3688899999998887654
No 95
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.88 E-value=1.1e-19 Score=164.75 Aligned_cols=342 Identities=15% Similarity=0.122 Sum_probs=237.0
Q ss_pred ccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHH
Q 041829 81 AYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAA 160 (486)
Q Consensus 81 ~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a 160 (486)
-+.|++.+.+..+.+. ++.+... ..+|.+..+-+++.+-+...|...... --++.++|+.+.-.|+.-.
T Consensus 20 L~gPGPsnl~~~V~~A----~~~~~lg-h~sPe~~qIm~~v~egikyVFkT~n~~------tf~isgsGh~g~E~al~N~ 88 (385)
T KOG2862|consen 20 LLGPGPSNLSGRVQEA----MSRPSLG-HMSPEFVQIMDEVLEGIKYVFKTANAQ------TFVISGSGHSGWEAALVNL 88 (385)
T ss_pred eecCCCcCCCHHHHHh----hcCCccc-cCCHHHHHHHHHHHHHHHHHhccCCCc------eEEEecCCcchHHHHHHhh
Confidence 3457766666655543 4444333 478999999999999999999765542 2466667776665555433
Q ss_pred HHHHHHHhCccCCCCeEEEecCCCchh--HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEE
Q 041829 161 RDKALKRVGKNSLEKLVVYASDQTHSA--LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLC 238 (486)
Q Consensus 161 ~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv 238 (486)
.. +++.+++-...-.+ +...++.+|+ +|..|+.+... ....+.+++++.+. +|.+|.
T Consensus 89 le-----------Pgd~vLv~~~G~wg~ra~D~~~r~ga---~V~~v~~~~G~--~~~le~i~~~lsqh-----~p~~vf 147 (385)
T KOG2862|consen 89 LE-----------PGDNVLVVSTGTWGQRAADCARRYGA---EVDVVEADIGQ--AVPLEEITEKLSQH-----KPKAVF 147 (385)
T ss_pred cC-----------CCCeEEEEEechHHHHHHHHHHhhCc---eeeEEecCccc--CccHHHHHHHHHhc-----CCceEE
Confidence 22 67777766555544 5567888999 99999998765 89999999999874 478999
Q ss_pred EecCCccccccCC-hHHHHHHHHHhCCEEEeecc--ccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEe
Q 041829 239 ATVGTTSSTAVDP-LLALGNIAKSNGMWFHVDAA--YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVK 315 (486)
Q Consensus 239 ~~~~~t~tG~id~-l~~I~~ia~~~g~~lhvD~A--~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r 315 (486)
++++.|.||+.+| ++.+.++|++|++.+.||+. .||.-+..+++ ++|......+|.++.|.|.+.+.+.
T Consensus 148 v~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDew--------gVDvaytgSQKaL~aP~GLsiisfS 219 (385)
T KOG2862|consen 148 VTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEW--------GVDVAYTGSQKALGAPAGLSIISFS 219 (385)
T ss_pred EEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhh--------cccEEEecchhhcCCCCCcceeecC
Confidence 9999999999999 78889999999999999974 44444444555 8999999999999999999998777
Q ss_pred CchHHHHHhcC---CcccccccccccCCccCCCCCccCCC-CC-CC------cHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 041829 316 DRNTLIQSLST---NPEFLKNKASQANMVVDYKDWQIPLG-RR-FR------SLKLWMVLRLYGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 316 ~~~~~~~~~~~---~~~yl~~~~~~~~~~~~~~~~~~~~s-r~-~~------~l~~~~~l~~~g~~g~~~~~~~~~~~a~ 384 (486)
++.. .+.... ...|.+... ... .-|..... |. +. ...+-++|..+-.+|+++.+++++++++
T Consensus 220 ~ka~-~~~~~rK~~~~~~yFd~~----~~~--~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I~eeGL~~~~~rH~e~s~ 292 (385)
T KOG2862|consen 220 DKAL-EAIRDRKTKPVSFYFDIL----RLG--NFWGCDGEPRAYHHTPPVQLLYSLRAALALIAEEGLENSWRRHREMSK 292 (385)
T ss_pred HHHH-HHHhhccCCceEEEEeHH----hhc--chhccCCcccccccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6542 222111 122222110 000 11111111 11 11 1355677888889999999999999999
Q ss_pred HHHHHHhcCCCeEEec---CCCceEE-EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee-ECCEeEEEEEecCCC
Q 041829 385 HFEGLVAQDLRFEVVT---PRIFSLV-CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV-LSGKYILRFAVGAPL 459 (486)
Q Consensus 385 ~l~~~l~~~~~~~~~~---~~~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~~~~~lRi~~~~~~ 459 (486)
+++..|+++ |++++. .+.++.+ .+.. |.+. +-.++..++.+++.+.+++.. .-...++||.++...
T Consensus 293 ~l~~~l~~~-GLq~fv~~e~~rlptvttv~v-p~gv-------Dw~dVv~~~~~~~~vei~gglg~~~gKv~RIGl~gcn 363 (385)
T KOG2862|consen 293 WLKLSLEAL-GLQLFVVDEELRLPTVTTVKV-PYGV-------DWKDVVAYAMSHYVVEIGGGLGPTVGKVFRIGLLGCN 363 (385)
T ss_pred HHHHHHHHh-CccceecChhhccCcceeeec-CCCC-------CHHHHHHHHHHhcCEEeccccCCCcccEEEEEEeecc
Confidence 999999998 888764 2233322 2232 3221 125677777777766665542 122349999998888
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q 041829 460 TEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 460 ~t~~di~~~~~~l~~~~~~ 478 (486)
.+.+-|+..++.|+...++
T Consensus 364 a~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862|consen 364 ANVEYIDNVVELLKLALQR 382 (385)
T ss_pred CCcHHHHHHHHHHHHHHhh
Confidence 8999999999999887664
No 96
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.87 E-value=6.5e-20 Score=177.34 Aligned_cols=329 Identities=17% Similarity=0.143 Sum_probs=226.8
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
+...+.+...+..+ ....||...++|++ +++.+|.+. ++.+++||.|+.++|.+.--.
T Consensus 15 ~~e~~~v~~vl~sg--~i~~G~~v~~FE~~----~ae~~G~k~---------ava~~sgT~AL~laL~al~ig------- 72 (374)
T COG0399 15 EEELAAVQEVLKSG--WLTGGPFVRRFEQA----FAEYLGVKY---------AVAVSSGTAALHLALLALAIG------- 72 (374)
T ss_pred hHHHHHHHHHHHcC--CeecChHHHHHHHH----HHHHhCCCe---------EEEecChHHHHHHHHHhcCCC-------
Confidence 33344444444433 23348999999998 999999886 689999999999998754311
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|++++.+..+..+++-..|+ +++.|++|++ ++.||++.||++|.+.++ .|+..+ ..|...
T Consensus 73 ---~GDeVI~ps~TfvATan~i~~~Ga---~PVFvDid~~-T~nid~~~ie~aIt~~tK------AIipVh---l~G~~~ 136 (374)
T COG0399 73 ---PGDEVIVPSFTFVATANAVLLVGA---KPVFVDIDPD-TLNIDPDLIEAAITPRTK------AIIPVH---LAGQPC 136 (374)
T ss_pred ---CCCEEEecCCchHHHHHHHHHcCC---eEEEEecCCc-ccCCCHHHHHHHcccCCe------EEEEeh---hccCCC
Confidence 788999999999999999999999 9999999987 489999999999998754 555554 568888
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccC-CcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcc
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDG-VEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~-~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
|+++|.+||++||++++.|+|++-+.. ++....| +..+-+++|.+.|.+.+. ..|+++++|++...+....+..
T Consensus 137 dm~~i~~la~~~~l~vIEDaAqa~Ga~----y~gk~vGt~Gd~~~fSF~~~K~ittg-EGGav~tnd~ela~k~~~lr~h 211 (374)
T COG0399 137 DMDAIMALAKRHGLPVIEDAAQAHGAT----YKGKKVGSFGDIGAFSFHATKNLTTG-EGGAVVTNDEELAEKARSLRNH 211 (374)
T ss_pred CHHHHHHHHHHcCCeEEEEcchhccCe----ecCcccccccceEEEEecCCCCcccc-CceEEEeCCHHHHHHHHHHHHh
Confidence 999999999999999999999987653 3333222 334667788889998766 7888888887655443221111
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce----
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS---- 405 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~---- 405 (486)
-.... . .+.-+....|-..+.--+-+++.....+.++++.++..+++++..+.|++++++.+..++...
T Consensus 212 G~~~~-----~--~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~ 284 (374)
T COG0399 212 GLSRD-----A--VFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYAEALKGLPGITLPPEPDGAVHAW 284 (374)
T ss_pred CcCCC-----c--cccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCccccCCCCCceeee
Confidence 11000 0 011112233333444444455555556788999999999999999999999887665443332
Q ss_pred -EEEEEecCCCCCcccchHHHHHHHHHHHccCcE---EEEeee---------------EC-----CEeEEEEEecCCCCC
Q 041829 406 -LVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKI---FISHTV---------------LS-----GKYILRFAVGAPLTE 461 (486)
Q Consensus 406 -~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~---~~~~~~---------------~~-----~~~~lRi~~~~~~~t 461 (486)
....++.+. ......+.+.|.+.|.. +..|.. +. ....+.+-+ ++..+
T Consensus 285 ~~~~i~~~~~-------~~~R~~l~~~L~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~-~p~l~ 356 (374)
T COG0399 285 HLYTILVDEE-------GISRDALMESLKEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPL-HPNLS 356 (374)
T ss_pred eeeEEEecCC-------CCCHHHHHHHHHhCCCCceEEeeccccchhhhcccccccCCCchHHHHhhCeEEccC-CCCCC
Confidence 223333321 12235677777777532 211110 00 124677766 89999
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 462 WRHVNAAWEVMQDKAS 477 (486)
Q Consensus 462 ~~di~~~~~~l~~~~~ 477 (486)
.+|+++++++|+++..
T Consensus 357 ~~~~~~V~~~l~~~~~ 372 (374)
T COG0399 357 EEDVDRVIEALKEVLG 372 (374)
T ss_pred HHHHHHHHHHHHHHhc
Confidence 9999999999998764
No 97
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.87 E-value=1.4e-19 Score=182.14 Aligned_cols=293 Identities=13% Similarity=0.124 Sum_probs=193.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
..+..++.+.+++++|.+ ..+++++|+++++.++....+ +++.|+++...|.++..++..
T Consensus 83 ~~~~~~l~~~la~~~~~~---------~~i~~~~g~~~~~~~l~~~~~-----------~gd~V~~~~~~~~~~~~~~~~ 142 (385)
T PRK05958 83 SPAHEALEEELAEWFGAE---------RALLFSSGYAANLAVLTALAG-----------KGDLIVSDKLNHASLIDGARL 142 (385)
T ss_pred cHHHHHHHHHHHHHhCCC---------cEEEECcHHHHHHHHHHHhCC-----------CCCEEEEeCccCHHHHHHHHh
Confidence 345555666788988853 267777888888776543322 677888999999999999999
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
.|. +++.+|. .|++.+++++++.. ..+.++++....+++|.+.|+++|+++|+++|+|+++|++|+.
T Consensus 143 ~g~---~~~~~~~-------~d~~~l~~~i~~~~---~~~~lvi~~~~~~~~G~~~~l~~i~~ia~~~~~~li~De~~~~ 209 (385)
T PRK05958 143 SRA---RVRRYPH-------NDVDALEALLAKWR---AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGT 209 (385)
T ss_pred cCC---ceEEeCC-------CCHHHHHHHHHhcc---CCCeEEEEEecccCCCCcCCHHHHHHHHHHhCCEEEEECcccc
Confidence 898 8887763 38899999886531 1235666667788999999999999999999999999999965
Q ss_pred hhccC-cc-chhcccCCc-CCC-ceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 275 SACIC-PE-YRQYIDGVE-EAD-SFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 275 ~~~~~-~~-~~~~~~~~~-~aD-s~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
+.+.. .. ... ..++. ..| .+..++||+++.+ | |+++. ++............|.. .
T Consensus 210 g~~~~~g~~~~~-~~~~~~~~~~i~~~s~sK~~~~~-G-g~~~~-~~~~~~~~~~~~~~~~~-----------------~ 268 (385)
T PRK05958 210 GVLGPQGRGLAA-EAGLAGEPDVILVGTLGKALGSS-G-AAVLG-SETLIDYLINRARPFIF-----------------T 268 (385)
T ss_pred cccCCCCCchHH-hhCCCCCCceEEEEechhhcccC-C-cEEEc-CHHHHHHHHHhCcccee-----------------c
Confidence 43211 10 111 01121 234 5678899999753 3 55544 43332221111112211 1
Q ss_pred CCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHH
Q 041829 351 LGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLL 429 (486)
Q Consensus 351 ~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 429 (486)
++.. .....++.+++.+... .++.++..++++++.+.|++. ++++. ++..++++|.+.. .....++.
T Consensus 269 ~~~~~~~~aa~~aal~~~~~~--~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------~~~~~~~~ 336 (385)
T PRK05958 269 TALPPAQAAAARAALRILRRE--PERRERLAALIARLRAGLRAL-GFQLM-DSQSAIQPLIVGD--------NERALALA 336 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHHHHHc-CCCcC-CCCCCEEEEEeCC--------HHHHHHHH
Confidence 1111 1222444555544222 567788899999999999987 67754 4566778877642 12345788
Q ss_pred HHHHccCcEEEEeee----ECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 430 DDINSTGKIFISHTV----LSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 430 ~~l~~~g~~~~~~~~----~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+.|.+.| +.+.+.. ..+..++|+++ +..++++|+++++++|+++
T Consensus 337 ~~l~~~g-I~v~~~~~~~~~~~~~~lRis~-~~~~~~~~i~~~l~~l~~~ 384 (385)
T PRK05958 337 AALQEQG-FWVGAIRPPTVPAGTSRLRITL-TAAHTEADIDRLLEALAEA 384 (385)
T ss_pred HHHHHCC-ceEecccCCCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHhc
Confidence 8888887 4444321 12346899999 7788999999999999765
No 98
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.87 E-value=1e-19 Score=184.53 Aligned_cols=340 Identities=9% Similarity=0.044 Sum_probs=218.6
Q ss_pred HHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 92 FLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 92 ~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
.+.+.+...+... ...|....+..++++.+.+++.+..|.+.+ ..+.++|+|+|+++..++.+..+
T Consensus 73 ~~~~a~~~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~-----~~~v~it~G~~~al~l~~~~l~~-------- 139 (430)
T PLN00145 73 EAEDAVAAALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELS-----TDDIYLTAGCAQAIEIIMSVLAQ-------- 139 (430)
T ss_pred HHHHHHHHHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC--------
Confidence 3444444444332 235555667889999988888877665432 12689999999998887765432
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++...+..+...+...|+ +++.+++.++.+|.+|+++|++++++.+ .+++++.++|+||.+-
T Consensus 140 ---~Gd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~P~NPtG~v~ 207 (430)
T PLN00145 140 ---PGANILLPRPGYPLYEARAVFSGL---EVRHFDLLPERGWEVDLEGVEALADENT------VAMVIINPNNPCGSVY 207 (430)
T ss_pred ---CCCEEEEcCCCCccHHHHHHHcCC---EEEEeeCCcccCCcCCHHHHHHHhCcCc------eEEEEeCCCCCCCCCC
Confidence 677899999999998889999999 9999998665568999999999886543 4788899999999997
Q ss_pred C---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC-ceeeecccccCCC-CcceEEEEeCchHHHHH-
Q 041829 251 P---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQS- 323 (486)
Q Consensus 251 ~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~- 323 (486)
| +++|+++|+++|+++++|++|+.+.+....+... ..+.. .. ....+..|.+..| .-+|+++..++..+...
T Consensus 208 ~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~-~~~~~~~~vi~~~S~SK~~~~pG~RlG~iv~~~~~~~~~~~ 286 (430)
T PLN00145 208 SYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPM-GVFGEVAPVLTLGSISKRWVVPGWRLGWIATCDPNGILKET 286 (430)
T ss_pred CHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccch-hhhcccCcEEEEeccccccCCCCeeEEEEEEecchhhhhhh
Confidence 7 7889999999999999999997654321111111 11111 12 3355578986555 56899887543221110
Q ss_pred --hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 324 --LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 324 --~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
...-..+.. +.. ....+...++...+ ..+.+++..++..+.++.+.+.|++++++..
T Consensus 287 ~~~~~~~~~~~----------------~~~--~~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~ 348 (430)
T PLN00145 287 KVVDSIRNYLN----------------IST--DPATFVQGAIPQIIANTKEEFFTKTLGLLKETADICYEKIKEIKCITC 348 (430)
T ss_pred HHHHHHHHHhc----------------ccC--CCCHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 000000100 000 01122222222222 2456788888889999999999999988876
Q ss_pred ecCCCceEE-EEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 399 VTPRIFSLV-CFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 399 ~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
...|...++ .+++....... .. ...++..+|.+ .|.+++.+..+...+++|+++ . .+.++++..+++|.+++
T Consensus 349 ~~~P~ga~y~~v~l~~~~~~~--~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~lRis~-~--~~~~~l~~al~rl~~~~ 422 (430)
T PLN00145 349 PHKPEGSMFVMVKLDLSCLSG--IK-DDMDFCCKLAKEESVVVLPGSALGMKNWLRITF-A--IDPPSLEDGLERLKSFC 422 (430)
T ss_pred CcCCCeeeEEEeccChhhcCC--CC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEe-C--CCHHHHHHHHHHHHHHH
Confidence 544554444 33443110000 00 12445655554 454444444555567999999 3 37888999999998888
Q ss_pred HHHHH
Q 041829 477 SALLA 481 (486)
Q Consensus 477 ~~l~~ 481 (486)
++..+
T Consensus 423 ~~~~~ 427 (430)
T PLN00145 423 LRHAK 427 (430)
T ss_pred HHhcc
Confidence 76554
No 99
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.87 E-value=3.3e-19 Score=178.59 Aligned_cols=346 Identities=11% Similarity=0.073 Sum_probs=211.3
Q ss_pred CCCCcccccCCCCCCHHHHHHHHHHHhc-Cc--CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh
Q 041829 74 WQSPNYFAYYPSNSSVAGFLGEMLSAGL-NI--VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS 150 (486)
Q Consensus 74 ~~~p~~~~~~~~~~~~~~~~~~~l~~~~-n~--~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt 150 (486)
+.+..|+|.- ..+.....+.+.+..+- +. ....|.......++|++ +++++|.+. .+++++|+
T Consensus 3 f~s~dyLgl~-~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~~~~~~LE~~----lA~~~g~e~---------al~~~sG~ 68 (392)
T PLN03227 3 FATHDFLSTS-SSPTLRQTALESLSHYGCGSCGPRGFYGTIDAHLELEQC----MAEFLGTES---------AILYSDGA 68 (392)
T ss_pred CcCcCccCCC-CCHHHHHHHHHHHHHhCCCCcccccccCChHHHHHHHHH----HHHHhCCCc---------EEEecCcH
Confidence 4455687774 33334444444444311 11 11224444566677777 899999764 57777778
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh-
Q 041829 151 EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT- 229 (486)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~- 229 (486)
.++..++.+..+ +++.|++++..|.++...+...+. +++.++.. |++++++.++....
T Consensus 69 ~a~~~~i~~l~~-----------~GD~Vl~~~~~h~s~~~~~~l~~~---~~~~~~~~-------d~~~l~~~~~~i~~~ 127 (392)
T PLN03227 69 STTSSTVAAFAK-----------RGDLLVVDRGVNEALLVGVSLSRA---NVRWFRHN-------DMKDLRRVLEQVRAQ 127 (392)
T ss_pred HHHHHHHHHhCC-----------CCCEEEEeccccHHHHHHHHHcCC---eEEEeCCC-------CHHHHHHHHHHhhhh
Confidence 888876665322 788999999999999999888777 77766643 55556554433221
Q ss_pred -------CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhc-----ccCCcCCCceee
Q 041829 230 -------IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY-----IDGVEEADSFNM 297 (486)
Q Consensus 230 -------~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~-----~~~~~~aDs~~~ 297 (486)
...++.+|++....+++|.+.|+++|.++|++||+++++|++|+.+. ..+..+.. +....++|.+++
T Consensus 128 ~~a~~~~~~~~t~~vi~E~v~~~~G~i~~l~~i~~l~~~~g~~livDe~~~~g~-~g~~G~g~~~~~g~~p~~~~Div~~ 206 (392)
T PLN03227 128 DVALKRKPTDQRRFLVVEGLYKNTGTLAPLKELVALKEEFHYRLILDESFSFGT-LGKSGRGSLEHAGLKPMVHAEIVTF 206 (392)
T ss_pred ccccccccCCCcEEEEEcCCcCCCCcccCHHHHHHHHHHcCCEEEEECcccccc-cCCCCCcHHHHcCCCCCCCceEEEe
Confidence 11245788888899999999999999999999999999999997322 21110000 111346899999
Q ss_pred ecccccCCCCcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHH
Q 041829 298 NAHKWFLTNFDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGY 375 (486)
Q Consensus 298 ~~hK~l~~p~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~ 375 (486)
+.+|+++ |. .|+++.+ ++.. +.+.. ...+. .+....++.+|+++..+ .....+++
T Consensus 207 slsk~~g-~~-gg~v~~~-~~~~-~~~~~~~~~~~-------------------~~~~~~p~~~~aa~~al~~~~~~~~~ 263 (392)
T PLN03227 207 SLENAFG-SV-GGMTVGS-EEVV-DHQRLSGSGYC-------------------FSASAPPFLAKADATATAGELAGPQL 263 (392)
T ss_pred echhhhh-cc-CcEEecC-HHHH-HHHHHhCcCcc-------------------ccCCCCHHHHHHHHHHHHHHhcCHHH
Confidence 9999876 32 3444433 3322 12211 11111 11111222334443322 11113567
Q ss_pred HHHHHHHHHHHHHHHhcCCCeE----------EecCCCceEEEEEecCCCCCc-ccchHHHHHHHHHHHccCcEEEEee-
Q 041829 376 IRNHIQLAKHFEGLVAQDLRFE----------VVTPRIFSLVCFRLLPPHNDE-DHGNKLNHKLLDDINSTGKIFISHT- 443 (486)
Q Consensus 376 ~~~~~~~a~~l~~~l~~~~~~~----------~~~~~~~~~v~f~~~~~~~~~-~~~~~~~~~l~~~l~~~g~~~~~~~- 443 (486)
+++..+++++|++.|++. ++. +...+..+++.+.+.+..... ........++.+.+.++|.+.....
T Consensus 264 ~~~l~~~~~~l~~~L~~~-~~~~~~~~rg~~~~~~~~~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~ 342 (392)
T PLN03227 264 LNRLHDSIANLYSTLTNS-SHPYALKLRNRLVITSDPISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGG 342 (392)
T ss_pred HHHHHHHHHHHHHHHHhc-CCccccccccccccCCCCCCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEeccc
Confidence 888899999999999852 322 122345667888774311000 0001123577888888885442211
Q ss_pred ------eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 444 ------VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 444 ------~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
..-....+|+++ +..+|++||+++++.|+++.+++.
T Consensus 343 ~~~~~~~~~P~~~iR~~~-~~~~t~eei~~~~~~l~~~~~~~~ 384 (392)
T PLN03227 343 HVKKFLQLVPPPCLRVVA-NASHTREDIDKLLTVLGEAVEAIL 384 (392)
T ss_pred ccCCcCCCCCCceEEEEe-cCCCCHHHHHHHHHHHHHHHHHHH
Confidence 122346899999 899999999999999999998765
No 100
>PRK15029 arginine decarboxylase; Provisional
Probab=99.87 E-value=1.7e-19 Score=189.30 Aligned_cols=225 Identities=15% Similarity=0.153 Sum_probs=165.1
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCe
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNF 202 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v 202 (486)
+..|++||.+.+ -++++|+|.+|..++.++.. +++.|++++++|.|+..++.+.|+ .+
T Consensus 212 ~~aA~~fgA~~t--------~FlvNGST~gn~a~i~a~~~-----------~gd~Vlv~RN~HKSv~~al~L~ga---~P 269 (755)
T PRK15029 212 KYAARVFGADRS--------WSVVVGTSGSNRTIMQACMT-----------DNDVVVVDRNCHKSIEQGLILTGA---KP 269 (755)
T ss_pred HHHHHHhCCCcE--------EEEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eE
Confidence 448999999886 58889999999877776554 788999999999999999999999 99
Q ss_pred EEEeCCCCCC---CccC-----HHHHHHHHHHHH----hCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 203 RVLKTDSSTN---YSLS-----PDSLAEAISRDL----TIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 203 ~~v~~~~~~~---~~id-----~~~L~~~i~~~~----~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
++++...+.. +.++ ++.++++|++.. +.+.+|.++++|.+| +.|.+.++++|+++|+++|+.++||+
T Consensus 270 vyl~P~~~~~Gi~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PT-Y~Gv~~di~~I~~~~h~~~~~llvDE 348 (755)
T PRK15029 270 VYMVPSRNRYGIIGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCT-YDGVCYNAKEAQDLLEKTSDRLHFDE 348 (755)
T ss_pred EEecccccccCCccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCC-CcceeeCHHHHHHHHHhcCCeEEEEC
Confidence 9986543221 2345 999999997642 235678888888865 78999999999999999999999999
Q ss_pred cccchhccCccchh--ccc----CCcCCC-ceeeecccccCCCCcceEEEEeCc------hHHHHHhc----CCcccccc
Q 041829 271 AYAGSACICPEYRQ--YID----GVEEAD-SFNMNAHKWFLTNFDCSALWVKDR------NTLIQSLS----TNPEFLKN 333 (486)
Q Consensus 271 A~g~~~~~~~~~~~--~~~----~~~~aD-s~~~~~hK~l~~p~~~g~l~~r~~------~~~~~~~~----~~~~yl~~ 333 (486)
|||+.+.+.+.++. .+. ...++| .++.|.||+|.+..+++++.+++. +.+.+++. .+|+|+..
T Consensus 349 AhGah~~F~~~~p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQaS~LHv~~~~~~id~~r~~~~l~~~qSTSPSY~Lm 428 (755)
T PRK15029 349 AWYGYARFNPIYADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQASYIHVREGRGAINFSRFNQAYMMHATTSPLYAIC 428 (755)
T ss_pred ccccccccCccccccccccccccccCCCceEEEEchhhcccchhhhhhheeCCCccccCHHHHHHHHHHHcCCCcHHHHH
Confidence 99998888776653 110 114788 889999999999999999999765 22333322 23444322
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCC
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-ENLQGYIRNHIQLAKHFEGLVAQDLR 395 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~l~~~~~ 395 (486)
. .+=.+.+.+-. .| ++++++..+.+..|++.|.++++
T Consensus 429 A------------------------SLD~ar~~m~~~~G-~~l~~~~i~~~~~~r~~l~~~~~ 466 (755)
T PRK15029 429 A------------------------SNDVAVSMMDGNSG-LSLTQEVIDEAVDFRQAMARLYK 466 (755)
T ss_pred H------------------------HHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHhccc
Confidence 1 11112222221 23 45667778888888888877765
No 101
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.87 E-value=5.4e-20 Score=187.03 Aligned_cols=325 Identities=12% Similarity=0.038 Sum_probs=203.6
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecC---CCc
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASD---QTH 185 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~---~~H 185 (486)
.......++|..+.+...++|+...+.+. -.+-+.+|+.||+.++.+... +++.|++.+ ..|
T Consensus 73 ~G~~~~d~lE~~~~~~~~~~f~~~~~~~~----~nv~~~SG~~AN~av~~aL~~-----------pgD~Il~~d~~~gGh 137 (475)
T PLN03226 73 GGNEYIDQIETLCQKRALEAFRLDPEKWG----VNVQPLSGSPANFAVYTALLQ-----------PHDRIMGLDLPHGGH 137 (475)
T ss_pred CCChhHHHHHHHHHHHHHHHhCCCcceeE----EecCcCchHHHHHHHHHHhCC-----------CCCEEEECCCCcCcc
Confidence 34457789999899999999998765210 011137889999988876644 677888733 344
Q ss_pred h---hHHHHHHHhCCCCC-CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 186 S---ALQKACQIGGIHPQ-NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 186 ~---s~~~a~~~~g~g~~-~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
. +....++..+.+.. +++.++.+++ ++.+|+++|++++.+. +|.+|+++ .+.+|..-|+++|.++|++
T Consensus 138 l~H~~~~~g~~~s~~~~~~~~~~y~~~~~-~g~iD~d~Le~~l~~~-----~pklIv~~--~S~~s~~~D~a~i~~ia~~ 209 (475)
T PLN03226 138 LSHGYQTDGKKISATSIYFESMPYRLDES-TGLIDYDKLEKKAMLF-----RPKLIIAG--ASAYPRDWDYARMRKIADK 209 (475)
T ss_pred hhhhhhhcccccccceEEEEeeeeeecCC-CCCcCHHHHHHHHhhc-----CCeEEEEe--cCcCCCccCHHHHHHHHHH
Confidence 4 33333333333100 1113344543 4699999999998653 25555543 4568888999999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCc---cccccccccc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNP---EFLKNKASQA 338 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~---~yl~~~~~~~ 338 (486)
+|++++||+||+.+.+..+..... ++.+|++++++||||.+|.| |++++++.. ......... .|..
T Consensus 210 ~ga~LlvD~AH~~Gli~~~~~~~p---~~~~Div~~t~hK~L~GP~G-g~I~~~~~~-~~~~~~g~~~~~d~~~------ 278 (475)
T PLN03226 210 VGALLMCDMAHISGLVAAQEAASP---FEYCDVVTTTTHKSLRGPRG-GMIFFRKGP-KPPKGQGEGAVYDYED------ 278 (475)
T ss_pred cCCEEEEEchhhhCcccCCCCCCC---CCCCeEEEecCcccccCCCc-eEEEEchhh-cccccCCCccHHHHHH------
Confidence 999999999999877654432211 34799999999999999987 788776531 110000000 1100
Q ss_pred CCccCC-CCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-CCceEEEEEecCCC
Q 041829 339 NMVVDY-KDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-RIFSLVCFRLLPPH 415 (486)
Q Consensus 339 ~~~~~~-~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~~~~~v~f~~~~~~ 415 (486)
..+. ..+.++++-. ....++.++++.+-..+++++.++..+++++|++.|.+. |++++.+ ...+++.+.+.+.+
T Consensus 279 --~i~~a~~~~~~g~p~~~~iaal~aAl~~i~~~~~~~~~~~~~~na~~L~~~L~~~-G~~l~~~~t~~hi~lv~~~~~g 355 (475)
T PLN03226 279 --KINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKAYQKQVKANAAALANRLMSK-GYKLVTGGTDNHLVLWDLRPLG 355 (475)
T ss_pred --HhccccCCccCCCchHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHhC-CCEEEcCCCCCCEEEEEccCCC
Confidence 0000 0011223322 223456677777766778888999999999999999995 9999863 33567767765533
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeee------ECCEeEEEEEe---cCCCCCHHHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTV------LSGKYILRFAV---GAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~------~~~~~~lRi~~---~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
. +. .++.+.|.+.|+. +.... .-....+|+.. ++...+++|++++.+.|.++++.
T Consensus 356 i-----~~--~~~~~~L~~~~I~-~nk~~~p~~~~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~~ 419 (475)
T PLN03226 356 L-----TG--SRVEKVLDLAHIT-LNKNAVPGDSSALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVTI 419 (475)
T ss_pred C-----CH--HHHHHHHHHCCCE-ECCCCCCCCcccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHHH
Confidence 1 11 2344445555533 22111 01124688722 36677999999999999888874
No 102
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.87 E-value=3.1e-19 Score=180.74 Aligned_cols=343 Identities=11% Similarity=0.080 Sum_probs=216.8
Q ss_pred HHHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcC-CCCCCeEEcCchhHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLS-SGQGGGVIQGTASEAVLVVLLAARDKALK 166 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~-~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 166 (486)
++..+.+.+...++.. ...|....+..++.+.+.+|+.+.++.+.+... ......++|+|+++++..++.+..+
T Consensus 51 p~~~~~~a~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~---- 126 (412)
T PTZ00433 51 TPAIQTKALVEAVDSQECNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCD---- 126 (412)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcC----
Confidence 4566666666655542 244555556789999999998876641100000 0012689999999998887765433
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|+++..+|..+...++..|+ +++.+|++++++|.+|+++|++++++. +.+|+++.++|+|
T Consensus 127 -------~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~i~~~~p~NPt 190 (412)
T PTZ00433 127 -------EGDNILVPAPGFPHYETVCKAYGI---EMRFYNCRPEKDWEADLDEIRRLVDDR------TKALIMTNPSNPC 190 (412)
T ss_pred -------CCCEEEEccCCcccHHHHHHHcCC---EEEEEecCccccCcCCHHHHHHHhccC------ceEEEEeCCCCCC
Confidence 677899999999999999999999 999999976556899999999887653 3578888999999
Q ss_pred cccC---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CCC-ceeeecccccCCC-CcceEEEEeCc---
Q 041829 247 TAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EAD-SFNMNAHKWFLTN-FDCSALWVKDR--- 317 (486)
Q Consensus 247 G~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aD-s~~~~~hK~l~~p-~~~g~l~~r~~--- 317 (486)
|.+- ++++|+++|+++|+++++|.+|..+......+.. +..+. ..+ .+..++.|.++.| .-+|+++..++
T Consensus 191 G~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~~i~~~SfSK~~~~pGlRlG~~i~~~p~~~ 269 (412)
T PTZ00433 191 GSNFSRKHVEDIIRLCEELRLPLISDEIYAGMVFNGATFTS-VADFDTTVPRVILGGTAKNLVVPGWRLGWLLLVDPHGN 269 (412)
T ss_pred CcccCHHHHHHHHHHHHHcCCeEEEeccccccccCCCCccc-hhhccCCCceEEEccchhhcCCCCeeEEEEEEeCCccc
Confidence 9874 5788899999999999999999764432111111 11111 112 4456789988544 56899887332
Q ss_pred -hHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcC
Q 041829 318 -NTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQD 393 (486)
Q Consensus 318 -~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~ 393 (486)
..+.+.+........ ....+...++...+ ....+++..++..+..+.+.+.|+++
T Consensus 270 ~~~~~~~~~~~~~~~~---------------------~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~ 328 (412)
T PTZ00433 270 GGDFLDGMKRLGMLVC---------------------GPCSVVQAALGEALLNTPQEHLEQIVAKLEEGAMVLYNHIGEC 328 (412)
T ss_pred HHHHHHHHHHHhhccC---------------------CCChHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 112222111000000 01112222222222 13456677778888889999999887
Q ss_pred CCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 394 LRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 394 ~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
.++++..+.....+.+++...... .. ....++.+.|.+ .|..+..+..+...+++|+++ .. .++++++.++.|
T Consensus 329 ~~~~~~~p~gg~f~~~~l~~~~~~--~~-~~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRis~-~~--~~e~l~~al~~l 402 (412)
T PTZ00433 329 IGLSPTMPRGSMFLMSRLDLEKFR--DI-KSDVEFYEKLLEEENVQVLPGEIFHMPGFTRLTI-SR--PVEVLREAVERI 402 (412)
T ss_pred CCCcccCCCeeEEEEEEechhhcC--CC-CCHHHHHHHHHHhcCEEEeCccccCCCCeEEEEe-cC--CHHHHHHHHHHH
Confidence 677654333334445565421000 00 012467777774 564444434444456999999 32 588899999999
Q ss_pred HHHHHHH
Q 041829 473 QDKASAL 479 (486)
Q Consensus 473 ~~~~~~l 479 (486)
.+++++.
T Consensus 403 ~~~~~~~ 409 (412)
T PTZ00433 403 KAFCERH 409 (412)
T ss_pred HHHHHHh
Confidence 8887643
No 103
>PRK07682 hypothetical protein; Validated
Probab=99.87 E-value=8.2e-20 Score=183.14 Aligned_cols=325 Identities=13% Similarity=0.094 Sum_probs=215.0
Q ss_pred HHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCC
Q 041829 94 GEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSL 173 (486)
Q Consensus 94 ~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~ 173 (486)
.+.+...+......|...++..++.+++.+|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 39 ~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~l~~----------- 103 (378)
T PRK07682 39 REASIRSLEQGYTSYTANAGLLELRQEIAKYLKKRFAVSYDP----NDEIIVTVGASQALDVAMRAIIN----------- 103 (378)
T ss_pred HHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC-----------
Confidence 344433343333446666788999999999999988874320 01589999999988777655433
Q ss_pred CCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC---
Q 041829 174 EKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD--- 250 (486)
Q Consensus 174 ~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id--- 250 (486)
+++.|++++.+|+.+...++..|. +++.++++.++++.+|+++|++++.+. +.+|+++.++|+||.+-
T Consensus 104 ~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~~~s~~ 174 (378)
T PRK07682 104 PGDEVLIVEPSFVSYAPLVTLAGG---VPVPVATTLENEFKVQPAQIEAAITAK------TKAILLCSPNNPTGAVLNKS 174 (378)
T ss_pred CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCCCCHHHHHhhcCcc------cEEEEEECCCCCcCcCcCHH
Confidence 677888999999999999999998 899999875445899999999988653 35677888999999985
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchhccCccchh--cccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQ--YIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~--~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~ 327 (486)
.+++|+++|++|++++++|.+|+.+... +.... .+.+...-..+..++.|.++.| ..+|+++..+ +.+. .+...
T Consensus 175 ~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlR~G~~~~~~-~~i~-~l~~~ 251 (378)
T PRK07682 175 ELEEIAVIVEKHDLIVLSDEIYAELTYD-EAYTSFASIKGMRERTILISGFSKGFAMTGWRLGFIAAPV-YFSE-AMLKI 251 (378)
T ss_pred HHHHHHHHHHHcCcEEEEehhhhhcccC-CCCCChhhcccccCCEEEEecCcccccChhhhhhhhhcCH-HHHH-HHHHH
Confidence 4889999999999999999999865432 11111 1111112235677789999754 3488887643 3232 22111
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS 405 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 405 (486)
..+.. .....+...++...+ |...+++..++..++++++.+.|+++ ++++. +|..+
T Consensus 252 ~~~~~--------------------~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~p~g~ 309 (378)
T PRK07682 252 HQYSM--------------------MCAPTMAQFAALEALRAGNDDVIRMRDSYRKRRNFFVTSFNEI-GLTCH-VPGGA 309 (378)
T ss_pred HHhhc--------------------cCCCHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCee
Confidence 11100 001122333333333 44556777788889999999999997 77754 45555
Q ss_pred EEEEE-ecCCCCCcccchHHHHHHHHHHH-ccCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 406 LVCFR-LLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 406 ~v~f~-~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.+.|. +.+.. .+ ..++.+.+. +.| +.+.++ .+. +..++|+++ + ++++++++.+++|+++.++
T Consensus 310 ~~~~~~~~~~~-----~~--~~~~~~~ll~~~g-v~v~pg~~f~~~~~~~iRis~-~--~~~~~l~~~l~~l~~~l~~ 376 (378)
T PRK07682 310 FYAFPSISSTG-----LS--SEEFAEQLLLEEK-VAVVPGSVFGESGEGFIRCSY-A--TSLEQLQEAMKRMKRFVEN 376 (378)
T ss_pred EEEEEeccCCC-----CC--HHHHHHHHHHhCC-EEEcCchhhCcCCCCeEEEEe-C--CCHHHHHHHHHHHHHHHhh
Confidence 55443 32211 11 245666665 456 444443 332 357999999 3 3689999999999887754
No 104
>PLN02656 tyrosine transaminase
Probab=99.87 E-value=3.3e-19 Score=180.24 Aligned_cols=337 Identities=9% Similarity=0.022 Sum_probs=216.4
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+..+ ...|....+..++++.+.+++.+.+|.+.+ ..+.++|+|+++++..++.+..+
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 118 (409)
T PLN02656 50 THVAQEAVVDALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLS-----LDDVFITSGCTQAIDVALSMLAR------ 118 (409)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----cccEEEeCChHHHHHHHHHHHhC------
Confidence 455555565555443 345666667889999999999888775432 12689999999998777765433
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|++++.+|..+...++..|+ +++.+|++++++|.+|+++|++++++. +.+|+++.++|+||.
T Consensus 119 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~ 184 (409)
T PLN02656 119 -----PGANILLPRPGFPIYELCAAFRHL---EVRYVDLLPEKGWEVDLDAVEALADQN------TVALVIINPGNPCGN 184 (409)
T ss_pred -----CCCeEEEeCCCCCcHHHHHHHcCC---EEEEEeCCCcCCCCCCHHHHHHHhccC------ceEEEEECCCCCCCC
Confidence 677899999999988888899999 999999975445789999999887543 346888889999999
Q ss_pred c---CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC-C-ceeeecccccCCC-CcceEEEEeCc-----
Q 041829 249 V---DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA-D-SFNMNAHKWFLTN-FDCSALWVKDR----- 317 (486)
Q Consensus 249 i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a-D-s~~~~~hK~l~~p-~~~g~l~~r~~----- 317 (486)
+ +++++|+++|+++|+++++|++|+.+.......... ..+... . .+..++.|.++.| .-+|+++..++
T Consensus 185 ~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~-~~~~~~~~vi~~~SfSK~f~~pGlRiG~~i~~~~~~~~~ 263 (409)
T PLN02656 185 VYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPM-GVFGSIVPVLTLGSLSKRWIVPGWRLGWFVTTDPSGSFR 263 (409)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccH-HHhcccCcEEEEcccchhccCcceeEEEEEEeCcccccc
Confidence 9 578999999999999999999998654321111111 011111 1 3456688985544 66899887532
Q ss_pred -hHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcC
Q 041829 318 -NTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQD 393 (486)
Q Consensus 318 -~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~ 393 (486)
..+...+....... . ....+...++...+ ..+.+++..++..+.++.+.+.|+.+
T Consensus 264 ~~~~~~~~~~~~~~~-------------------~--~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~ 322 (409)
T PLN02656 264 DPKIVERIKKYFDIL-------------------G--GPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEI 322 (409)
T ss_pred cHHHHHHHHHHHhhh-------------------c--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 11222221100000 0 01122333333333 23467777888888899999999988
Q ss_pred CCeEEecCCCceEEEE-EecCCCCCcccchHHHHHH-HHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHH
Q 041829 394 LRFEVVTPRIFSLVCF-RLLPPHNDEDHGNKLNHKL-LDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEV 471 (486)
Q Consensus 394 ~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~l-~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~ 471 (486)
+++....+|..+++.| ++...... .... ..++ ...+.+.|..+..+..+...+++|++++ . +++++++.++.
T Consensus 323 ~~~~~~~~p~gg~~~w~~l~~~~~~--~~~~-~~~~~~~~l~~~gV~v~pg~~fg~~~~iRi~~~-~--~~e~l~eal~r 396 (409)
T PLN02656 323 PCITCPHKPEGSMAVMVKLNLSLLE--DISD-DIDFCFKLAREESVIILPGTAVGLKNWLRITFA-A--DPSSLEEALGR 396 (409)
T ss_pred CCCcCCcCCCeEEEEEEecchhhcC--CCCC-HHHHHHHHHHhCCEEEecchhcCCCCeEEEEeC-C--CHHHHHHHHHH
Confidence 6654334565555443 44210000 0000 1233 3444556654444444555579999993 2 68999999999
Q ss_pred HHHHHHHH
Q 041829 472 MQDKASAL 479 (486)
Q Consensus 472 l~~~~~~l 479 (486)
|+++....
T Consensus 397 l~~~~~~~ 404 (409)
T PLN02656 397 IKSFYLRH 404 (409)
T ss_pred HHHHHHHh
Confidence 98877644
No 105
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.87 E-value=6.7e-20 Score=183.08 Aligned_cols=319 Identities=15% Similarity=0.094 Sum_probs=204.1
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
..+|...++|++ +++++|.+. .++++|||+|+..++.+.... +++.|+++..+|.+.
T Consensus 30 ~~g~~~~~le~~----la~~~g~~~---------~v~~~sgt~al~lal~al~~~----------~Gd~Viv~~~~~~~~ 86 (379)
T PRK11658 30 TTGPKNQALEQA----FCQLTGNQH---------AIAVSSATAGMHITLMALGIG----------PGDEVITPSLTWVST 86 (379)
T ss_pred cCCHhHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHcCCC----------CCCEEEECCCcHHHH
Confidence 357888899998 888888763 688999999988887654211 678899999999999
Q ss_pred HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 189 QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 189 ~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
..++...|+ +++.++++++ ++.+|+++|++++++.+ .+|+. ++++|...|+++|.++|+++|+++++
T Consensus 87 ~~~~~~~G~---~~v~vd~~~~-~~~~d~~~l~~~i~~~t------kav~~---~~~~G~~~d~~~i~~~a~~~gi~vi~ 153 (379)
T PRK11658 87 LNMIVLLGA---TPVMVDVDRD-TLMVTPEAIEAAITPRT------KAIIP---VHYAGAPADLDAIRAIGERYGIPVIE 153 (379)
T ss_pred HHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHhcccCC------eEEEE---eCCCCCcCCHHHHHHHHHHcCCeEEE
Confidence 999999999 9999999865 37899999999987543 35553 44689999999999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhc--CCcccccccccccCC-ccCCC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLS--TNPEFLKNKASQANM-VVDYK 345 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~--~~~~yl~~~~~~~~~-~~~~~ 345 (486)
|+|++.+....... .+-.+.+.++++++|.+.++ ..|+++..+++...+... ....+.......... ...+.
T Consensus 154 D~a~a~g~~~~~~~----~g~~g~~~~Sf~~~K~l~~g-~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~ 228 (379)
T PRK11658 154 DAAHAVGTYYKGRH----IGARGTAIFSFHAIKNITCA-EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAE 228 (379)
T ss_pred ECCCccCCeECCee----cCCCCCEEEeCCCCCcCccc-CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcce
Confidence 99998544332111 12224577888899998664 356666666654433221 111111000000000 00000
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-----ceEEEEEecCCCCCccc
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI-----FSLVCFRLLPPHNDEDH 420 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~-----~~~v~f~~~~~~~~~~~ 420 (486)
. ...|..++...+-+++.....+++++..++..++++++.+.|++++...+..+.. ..++++++.+..
T Consensus 229 ~--~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~~~a~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 301 (379)
T PRK11658 229 V--LTPGYKYNLADINAAIALVQLAKLEALNARRREIAARYLQALADLPFQPLSLPAWPHQHAWHLFIIRVDEER----- 301 (379)
T ss_pred e--eccccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCccCcCCCCCCceeEEEEEEEECCcc-----
Confidence 0 1122223333444555555568899999999999999999999886432322211 235556654211
Q ss_pred chHHHHHHHHHHHccCcEEE---Eeee----EC--------------CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFI---SHTV----LS--------------GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~---~~~~----~~--------------~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
......++.+.|.++|+..- .+.. +. ....+.+-+ ++..|++|++++++.|+++.
T Consensus 302 ~~~~r~~~~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~lP~-~~~l~~~~~~~i~~~i~~~~ 377 (379)
T PRK11658 302 CGISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPL-FPDMTDADVDRVITALQQIA 377 (379)
T ss_pred ccCCHHHHHHHHHHCCCCCcccCcCcccChhhhccCCCCCChHHHHHHhCeEEccC-CCCCCHHHHHHHHHHHHHHH
Confidence 01123467777777663211 0100 00 013444544 78899999999999998864
No 106
>PLN02187 rooty/superroot1
Probab=99.87 E-value=5.1e-19 Score=180.71 Aligned_cols=344 Identities=8% Similarity=0.036 Sum_probs=219.3
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+... ...|...++..++.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~-----~~~I~it~G~~~al~~~~~~l~~------ 153 (462)
T PLN02187 85 CIEAEDAVVDVLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLT-----PEDIFLTAGCNQGIEIVFESLAR------ 153 (462)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCC-----cccEEEeCCHHHHHHHHHHHhcC------
Confidence 334445454444322 335556667888999999999887765332 12689999999998877765543
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..+++.+...++..|+ +++.+|+.++++|.+|+++|++++++. +.+++++.|+|+||.
T Consensus 154 -----pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~~~l~~~~~~~~d~~~l~~~~~~~------~~~v~i~nP~NPTG~ 219 (462)
T PLN02187 154 -----PNANILLPRPGFPHYDARAAYSGL---EVRKFDLLPEKEWEIDLEGIEAIADEN------TVAMVVINPNNPCGN 219 (462)
T ss_pred -----CCCEEEEeCCCCccHHHHHHHcCC---EEEEEeCccccCCccCHHHHHHhcCCC------cEEEEEeCCCCCCCC
Confidence 778899999999999889999999 999999865456899999999887543 347888899999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CCCce-eeecccccCCC-CcceEEEEeCchHHH-
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EADSF-NMNAHKWFLTN-FDCSALWVKDRNTLI- 321 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aDs~-~~~~hK~l~~p-~~~g~l~~r~~~~~~- 321 (486)
+-+ +++|+++|+++|+++++|++|+.+.+..+.+... ..+. ....+ ..++.|.++.| .-+|+++..++..+.
T Consensus 220 v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~-~~~~~~~~vi~l~SfSK~f~~pGlRiG~~v~~~p~~~~~ 298 (462)
T PLN02187 220 VYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSM-GKFASIVPVLTLAGISKGWVVPGWKIGWIALNDPEGVFE 298 (462)
T ss_pred ccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeH-HHhccCCcEEEEecchhhcCCccceeEEEEecCchhHHH
Confidence 965 8899999999999999999998754321111111 1111 11233 45679996655 458988875443111
Q ss_pred --HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcCCCe
Q 041829 322 --QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQDLRF 396 (486)
Q Consensus 322 --~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~~~~ 396 (486)
+.+.....+. .+.. ....+..+++...+ ..+.+++..+...+.++.+.+.|++++++
T Consensus 299 ~~~~~~~~~~~~----------------~~~~--~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~~~ 360 (462)
T PLN02187 299 TTKVLQSIKQNL----------------DVTP--DPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIPCV 360 (462)
T ss_pred HHHHHHHHHHhc----------------cccC--CCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCCCC
Confidence 1111100110 0000 00122223333322 34667788888888999999999998655
Q ss_pred EEecCCCceEE-EEEecCCCCCcccchHHHHHHHHHH-HccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 397 EVVTPRIFSLV-CFRLLPPHNDEDHGNKLNHKLLDDI-NSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 397 ~~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..+..|..+++ .+++...... ... ...+++.++ .+.|.++..+..+...+++|++++ +.++.++..+++|.+
T Consensus 361 ~~~~~P~gg~fl~~~l~~~~~~--~~~-~~~~~~~~ll~~~gV~v~pG~~fg~~~~iRis~~---~~~e~l~~al~rL~~ 434 (462)
T PLN02187 361 VCPKKPESCTYLLTKLELSLMD--NIK-DDIDFCVKLAREENLVFLPGDALGLKNWMRITIG---VEAHMLEDALERLKG 434 (462)
T ss_pred cCCCCCCEeEEEEeecChhhCC--CCC-CHHHHHHHHHhhCCEEEECccccCCCCeEEEEeC---CCHHHHHHHHHHHHH
Confidence 43334554333 3444311000 000 113444444 556644444444545679999993 368999999999999
Q ss_pred HHHHHHHhh
Q 041829 475 KASALLARL 483 (486)
Q Consensus 475 ~~~~l~~~~ 483 (486)
++++..++.
T Consensus 435 ~l~~~~~~~ 443 (462)
T PLN02187 435 FCTRHAKKT 443 (462)
T ss_pred HHHHhhhcc
Confidence 988766543
No 107
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.87 E-value=4.1e-19 Score=179.54 Aligned_cols=337 Identities=14% Similarity=0.099 Sum_probs=210.0
Q ss_pred cCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccc---cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCch
Q 041829 73 HWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFS---WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTA 149 (486)
Q Consensus 73 ~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~---~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~gg 149 (486)
.+.+..|+|... .+.....+.+.+..+-...+.. +...+...++|++ +++++|.+. .+++++|
T Consensus 49 ~~~sn~ylgl~~-~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~----la~~~g~~~---------~~~~~SG 114 (406)
T PRK13393 49 VWCSNDYLGMGQ-HPAVLAAMHEALDTCGAGAGGTRNISGTNHYHVLLEAE----LADLHGKEA---------ALLFTSG 114 (406)
T ss_pred EeecccccCCCC-CHHHHHHHHHHHHHcCCCCcccccccCChHHHHHHHHH----HHHHhCCCc---------EEEeCCc
Confidence 345567888742 2334444555554421111111 1112334455544 899998643 6777778
Q ss_pred hHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh
Q 041829 150 SEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT 229 (486)
Q Consensus 150 t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~ 229 (486)
++||..++....... ++.+|+++...|.++..+++..|. +++.+|. .|++++++.++...
T Consensus 115 ~~An~~ai~~l~~~~---------~g~~I~~~~~~H~s~~~~~~~~g~---~~~~~~~-------~d~~~l~~~l~~~~- 174 (406)
T PRK13393 115 YVSNWAALSTLGSRL---------PGCVILSDELNHASMIEGIRHSRA---EKRIFRH-------NDPADLERKLSDLD- 174 (406)
T ss_pred HHHHHHHHHHhhcCC---------CCCEEEEccchhHHHHHHHHHcCC---eEEEeCC-------CCHHHHHHHHHhcc-
Confidence 889998887432210 356788888899999999988887 7776653 37888888876431
Q ss_pred CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCC-cCCCceeeecccccCCC
Q 041829 230 IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGV-EEADSFNMNAHKWFLTN 306 (486)
Q Consensus 230 ~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~-~~aDs~~~~~hK~l~~p 306 (486)
...+.+|+++.+++++|.+.|+++|.++|+++|+++++|++|+.+.+ .+..... ..++ +..|.+..++-|.++.+
T Consensus 175 -~~~~~~v~~~~v~~~~G~~~~l~~i~~l~~~~~~~livDea~~~g~~-g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~ 252 (406)
T PRK13393 175 -PHRPKLVAFESVYSMDGDIAPIAEICDVAEKHGAMTYLDEVHAVGLY-GPRGGGIAEREGLADRLTIIEGTLAKAFGVM 252 (406)
T ss_pred -CCCCEEEEEcCCCCCCCchhCHHHHHHHHHHcCCEEEEECCcccccc-CCCCCchhhhcCCCCCCeEEEEeCchhhccc
Confidence 12356788889999999999999999999999999999999974332 1211111 1111 23577777889998865
Q ss_pred CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKH 385 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~ 385 (486)
. |+++ .++...........+|.. ..+.. .....+.++++.+-..+ ...++..+++++
T Consensus 253 G--G~~~-~~~~~~~~l~~~~~~~~~-----------------t~~~~p~~~aa~~aaL~~~~~~~--~~~~~~~~~~~~ 310 (406)
T PRK13393 253 G--GYIT-GSAALCDFIRSFASGFIF-----------------TTSLPPAVAAGALASVRHLKASS--AERERHQDRVAR 310 (406)
T ss_pred C--ceee-CCHHHHHHHHHhCcCcee-----------------cCccCHHHHHHHHHHHHHHhhCH--HHHHHHHHHHHH
Confidence 3 5554 333322211111112211 11111 12234455565543222 223566788999
Q ss_pred HHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHcc-CcEEEEeee----ECCEeEEEEEecCCCC
Q 041829 386 FEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST-GKIFISHTV----LSGKYILRFAVGAPLT 460 (486)
Q Consensus 386 l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~----~~~~~~lRi~~~~~~~ 460 (486)
+++.|++. +++++ ++..+++.+.+.. .....++.++|.++ | +++.+.. ..+..++|+++ +..+
T Consensus 311 l~~~L~~~-g~~~~-~~~~~i~~v~~~~--------~~~~~~l~~~L~~~~G-i~v~~~~~p~~p~g~~~iRis~-~~~~ 378 (406)
T PRK13393 311 LRARLDKA-GIPHL-PNPSHIVPVMVGD--------PVLCKQISDELLDRYG-IYVQPINYPTVPRGTERLRITP-SPLH 378 (406)
T ss_pred HHHHHHHc-CCCcC-CCCCCeEEEEeCC--------HHHHHHHHHHHHHhCC-EEEEeECCCCCCCCCceEEEEE-CCCC
Confidence 99999886 77765 4455666665421 12345677888775 6 5555432 23556899999 8899
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~l 479 (486)
|++|+++++++|+++.+++
T Consensus 379 t~edid~l~~~l~~~~~~~ 397 (406)
T PRK13393 379 TDADIEHLVQALSEIWARL 397 (406)
T ss_pred CHHHHHHHHHHHHHHHHhc
Confidence 9999999999999987653
No 108
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.86 E-value=2.3e-19 Score=190.78 Aligned_cols=364 Identities=13% Similarity=0.090 Sum_probs=233.9
Q ss_pred hhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccc--cCC----CCCC-HHHHHHHHHHHhcCcCccc
Q 041829 35 PGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFA--YYP----SNSS-VAGFLGEMLSAGLNIVGFS 107 (486)
Q Consensus 35 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~--~~~----~~~~-~~~~~~~~l~~~~n~~~~~ 107 (486)
|+.++..-+..+|+ +.++.++++ ++.+....|.. ...|.| |++ +... ......+|+++ +.+++..
T Consensus 31 P~~i~~~~~l~lp~-~~sE~e~~~---~~~~la~~N~~---~~~fig~G~y~~~~p~~i~r~v~~~p~~~Ta-ytPyQ~E 102 (939)
T TIGR00461 31 PPNILKRRPLQLEA-PSKEYEALA---HLKKIASKNHK---FKSYIGMGYYGTILPPVIQRNLLENPGWYTA-YTPYQPE 102 (939)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHH---HHHHHHhcCCC---ccccCCCCcCCCcCChHHHHHHHhCchhhhc-CCCCChh
Confidence 55565554567777 579999999 88887777754 334554 222 2111 12223345665 3555555
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
..+|.....+|.+.+ +++|.|++.. +..+..++|.+....+++.|... + ++..|++++..|+.
T Consensus 103 isQG~Le~l~e~Qt~--i~eLtGm~~a-------NaSl~d~atA~aEa~~~a~~~~~-~-------~~~~vlv~~~~hP~ 165 (939)
T TIGR00461 103 ISQGRLEALLNFQTV--VSDLTGLPVA-------NASLLDEGTAAAEAMALSFNVSK-K-------KANKFFVAKDLHPQ 165 (939)
T ss_pred hhhHHHHHHHHHHHH--HHHHHCCChh-------hhhccchhhHHHHHHHHHHHhhc-C-------CCCEEEECCCCCcc
Confidence 557777777887755 9999999975 67888888765443333322211 0 34679999999998
Q ss_pred HHHHHH----HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC
Q 041829 188 LQKACQ----IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG 263 (486)
Q Consensus 188 ~~~a~~----~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g 263 (486)
.....+ ..|+ +++.++ +++|++.+ + .+.|+++.| +.+|.+.|+++|++++|++|
T Consensus 166 ~~~v~~t~a~~~g~---~v~~~~----------~~~l~~~~--~------~~~v~~q~P-n~~G~ied~~~i~~~~h~~g 223 (939)
T TIGR00461 166 TKSVLHTRAKPFGI---EVIVVD----------CSDIKKAV--D------VFGCLLQYP-ATDGSILDYKQLIDALHSHK 223 (939)
T ss_pred hHHHHHHHHHhcCc---EEEEEc----------HHHHhhcC--C------EEEEEEECC-CCCeEEecHHHHHHHHHHcC
Confidence 765444 6788 887763 33465554 2 245555555 57899999999999999999
Q ss_pred CEEEeeccccchhccCccchhcccCCcCCCceeeecccccC-----CCCcceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 264 MWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFL-----TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 264 ~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~-----~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
+++++++-.-+..++.+ .... +||.+..+.++|+. +| ..|++.++++ +.+ .-|+.+.....+.
T Consensus 224 al~~~~ad~~al~ll~~-Pge~-----GaDi~vg~~q~fg~p~g~GGP-~aG~~a~~~~--l~r---~lPgrivG~s~D~ 291 (939)
T TIGR00461 224 SLVSVAADLMALTLLTP-PGHY-----GADIVLGSSQRFGVPMGYGGP-HAAFFAVKDE--YNR---KMPGRIVGVSKDA 291 (939)
T ss_pred CEEEEEechHHhCCcCC-HHHc-----CCcEEeeCCCccCCCCCCCCC-ceeeeeecHh--hHh---hCCCCceeEEecC
Confidence 99999654433333322 2222 89999666666553 44 3888888874 222 2233333321111
Q ss_pred CCccCCCCCcc----CCCCCCC------------cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 339 NMVVDYKDWQI----PLGRRFR------------SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 339 ~~~~~~~~~~~----~~sr~~~------------~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.+...+. +++ +.-||-. ++.+.+.+..+|.+|++++.++...++.+|.+.|++ .|++++.++
T Consensus 292 ~G~~~~~-l~LqtReqhIrRekAtSNICt~qaL~a~~a~~Y~~~~G~~GL~~iA~~~~~~a~~l~~~L~~-~G~~~~~~~ 369 (939)
T TIGR00461 292 LGNTALR-LALQTREQHIRRDKATSNICTAQVLLANVASSYCVYHGPKGLKNIARRIHSLTSILANGLEN-DPHELINKT 369 (939)
T ss_pred CCCccce-eecccccccccccccCcchhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHh-CCCcccCCC
Confidence 1111110 111 1223311 123344477789999999999999999999999999 599998888
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.+..+.+++... ...++.+++.++|.. +.. .....+++|+ +..+|++||+.+++.+.
T Consensus 370 fF~~~~v~~~~~---------~~~~i~~~~~~~gi~-l~~---~~~~~i~~s~-~E~~t~~di~~l~~~~~ 426 (939)
T TIGR00461 370 WFDTLTVKVGNG---------ISSELLKAAEEFNIN-LRA---VDTTTVGIAL-DETTTKADVENLLKVFD 426 (939)
T ss_pred ccceEEEEeCCC---------CHHHHHHHHHHCCCe-eee---cCCCEEEEEe-ecCCCHHHHHHHHHHhc
Confidence 888888887311 125677788888854 333 1224799999 99999999999999995
No 109
>PLN02231 alanine transaminase
Probab=99.86 E-value=9.4e-19 Score=180.75 Aligned_cols=338 Identities=13% Similarity=0.117 Sum_probs=221.5
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
...|..+.+..++.+.+.+|+.+..|.+.+ ..+.++|+|+++++..++.+.... +++.|+++...
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~-----pe~I~iT~Ga~~ai~~~~~~l~~~----------~gd~Vli~~P~ 225 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPAD-----PNDIFLTDGASPAVHMMMQLLIRS----------EKDGILCPIPQ 225 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCC-----cccEEEeCCHHHHHHHHHHHhccC----------CCCEEEEeCCC
Confidence 345777888999999999999998886543 136999999999988877655431 56789999999
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC---ChHHHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD---PLLALGNIAKS 261 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id---~l~~I~~ia~~ 261 (486)
++.+..+++..|. +++.+|++++++|.+|+++|++++++...++..+.+++++.++||||.+- .+++|+++|++
T Consensus 226 Y~~y~~~~~~~g~---~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~ 302 (534)
T PLN02231 226 YPLYSASIALHGG---TLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQ 302 (534)
T ss_pred ChhHHHHHHHcCC---EEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHH
Confidence 9999999999999 99999998765689999999999987655555677888899999999994 57889999999
Q ss_pred hCCEEEeeccccchhccC-cc---chhccc--CC--cCCCceee-ecccccC--CCCcceEEEEe--CchHHHHHhcCCc
Q 041829 262 NGMWFHVDAAYAGSACIC-PE---YRQYID--GV--EEADSFNM-NAHKWFL--TNFDCSALWVK--DRNTLIQSLSTNP 328 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~-~~---~~~~~~--~~--~~aDs~~~-~~hK~l~--~p~~~g~l~~r--~~~~~~~~~~~~~ 328 (486)
+|+|+++|.+|....+.. .. +..... +. .....+++ +..|.++ ...-+|++.+. ++...........
T Consensus 303 ~~l~lI~DEvY~~l~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~ 382 (534)
T PLN02231 303 EGLVLLADEVYQENVYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS 382 (534)
T ss_pred cCCEEEEEccchhcccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh
Confidence 999999999998654321 11 111111 11 01123444 6789653 34568888763 3433322211110
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHH--hChhhH-------HHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRL--YGLENL-------QGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~--~g~~g~-------~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
..+ ++.......+..+++. .|...+ .++.+...++++.+.+.|++++++++.
T Consensus 383 ~~~-------------------~s~~~~Q~~~~~~l~~p~~~~~~y~~~~~~~~~i~~~~~~r~~~l~~~L~~~~gi~~~ 443 (534)
T PLN02231 383 VNL-------------------CSNISGQILASLVMSPPKPGDESYESYMAEKDGILSSLARRAKTLEDALNSLEGVTCN 443 (534)
T ss_pred hhc-------------------CCChHHHHHHHHHhCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 000 1111111111122210 011222 234567788889999999999898865
Q ss_pred cCCCceEEEE-Eec-CCC-CCcccc--hHHHHHHHHHHHc-cCcEEEEeeeEC---CEeEEEEEecCCCCCHHHHHHHHH
Q 041829 400 TPRIFSLVCF-RLL-PPH-NDEDHG--NKLNHKLLDDINS-TGKIFISHTVLS---GKYILRFAVGAPLTEWRHVNAAWE 470 (486)
Q Consensus 400 ~~~~~~~v~f-~~~-~~~-~~~~~~--~~~~~~l~~~l~~-~g~~~~~~~~~~---~~~~lRi~~~~~~~t~~di~~~~~ 470 (486)
+|..+++.| ++. +.. .+..+. ......++..|.+ .|.+++.+..+. +..++|+++ ..++++++..++
T Consensus 444 -~p~Ggfylw~~l~lp~~~~~~~~~~~~~~d~~~~~~Ll~~~GV~vvPGs~Fg~~~g~~~~Rit~---~~~~e~l~eal~ 519 (534)
T PLN02231 444 -KAEGAMYLFPRIHLPQKAIKAAEAAKTAPDAFYCKRLLNATGIVVVPGSGFGQVPGTWHFRCTI---LPQEDKIPAIVS 519 (534)
T ss_pred -CCCeeeEEeccccCcHHHHHHHhhcCCCcHHHHHHHHHHhcCEEEeCCcccCCCCCCCeEEEEe---CCCHHHHHHHHH
Confidence 677777776 332 210 000000 0001234455554 565555555453 345799998 358999999999
Q ss_pred HHHHHHHHHHHhh
Q 041829 471 VMQDKASALLARL 483 (486)
Q Consensus 471 ~l~~~~~~l~~~~ 483 (486)
+|.++.++++++.
T Consensus 520 RL~~~~~~~~~~~ 532 (534)
T PLN02231 520 RLTEFHKSFMDEF 532 (534)
T ss_pred HHHHHHHHHHHHh
Confidence 9999999888765
No 110
>PLN00175 aminotransferase family protein; Provisional
Probab=99.86 E-value=2.8e-19 Score=180.69 Aligned_cols=329 Identities=14% Similarity=0.119 Sum_probs=218.5
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+...+......|....+..++++.+.+++.+.+|.+.+. ..+.++|+|+++++..++.+..+
T Consensus 69 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~----~~~I~vt~G~~~al~~~~~~l~~------- 137 (413)
T PLN00175 69 PDFVKEAAIQAIRDGKNQYARGFGVPELNSAIAERFKKDTGLVVDP----EKEVTVTSGCTEAIAATILGLIN------- 137 (413)
T ss_pred CHHHHHHHHHHHhcCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCCEEEeCCHHHHHHHHHHHhCC-------
Confidence 3445566655555434567667788999999999999988864320 01488899999988776664432
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|++++..|..+...++..|. +++.||+++++ +.+|+++|++++.+. +.+|+++.++|+||.+
T Consensus 138 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~-~~~~~~~l~~~~~~~------~k~i~i~~p~NPtG~~ 203 (413)
T PLN00175 138 ----PGDEVILFAPFYDSYEATLSMAGA---KIKTVTLRPPD-FAVPEDELKAAFTSK------TRAILINTPHNPTGKM 203 (413)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEEECCccc-CCCCHHHHHHhcCcC------ceEEEecCCCCCCCcC
Confidence 678898999999999999999999 99999998653 799999999988653 3478888999999999
Q ss_pred C---ChHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHH
Q 041829 250 D---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQS 323 (486)
Q Consensus 250 d---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~ 323 (486)
- ++++|+++|++|++|+++|.+|..+.+. +..... +.+...-..+..++.|.++.| .-+|+++... ..+. .
T Consensus 204 ~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~-~~~~s~~~~~~~~~~vi~i~SfSK~~~~~G~RiG~~v~~~-~l~~-~ 280 (413)
T PLN00175 204 FTREELELIASLCKENDVLAFTDEVYDKLAFE-GDHISMASLPGMYERTVTMNSLGKTFSLTGWKIGWAIAPP-HLTW-G 280 (413)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecccCccccC-CcccChhhCCCCcCcEEEEecchhhccCcchheeeeEeCH-HHHH-H
Confidence 5 5788999999999999999999765432 111111 111111234566789999755 4578877643 3222 2
Q ss_pred hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 324 LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
+.....+.. .....+..+++.+.+ +...+++..++..++++.+.+.|++. ++++. +
T Consensus 281 l~~~~~~~~--------------------~~~s~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~ 338 (413)
T PLN00175 281 VRQAHSFLT--------------------FATATPMQWAAVAALRAPESYYEELKRDYSAKKDILVEGLKEV-GFKVY-P 338 (413)
T ss_pred HHHHHhhcc--------------------CCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-C
Confidence 211111110 001122233333333 34557788888888999999999987 78765 4
Q ss_pred CCceE-EEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeE-----CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 402 RIFSL-VCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVL-----SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 402 ~~~~~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~-----~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
|..++ +.+++.+.+ .. ...++.+.|.+ .|..++.+..+ .+..++|+++ . .+++++++.+++|.+
T Consensus 339 p~g~~f~~~~~~~~~-----~~-~~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~~~iRls~-~--~~~e~l~~~~~rL~~ 409 (413)
T PLN00175 339 SSGTYFVMVDHTPFG-----FE-NDIAFCEYLIEEVGVAAIPPSVFYLNPEDGKNLVRFAF-C--KDEETLRAAVERMKT 409 (413)
T ss_pred CCeeEEEEEeccccC-----CC-CHHHHHHHHHHhCCEEEeCchHhCCCCCCCCCEEEEEE-c--CCHHHHHHHHHHHHH
Confidence 55454 444543311 10 12467777764 46544444433 1346899999 3 378999999999987
Q ss_pred HHH
Q 041829 475 KAS 477 (486)
Q Consensus 475 ~~~ 477 (486)
+++
T Consensus 410 ~~~ 412 (413)
T PLN00175 410 KLK 412 (413)
T ss_pred HHh
Confidence 654
No 111
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.86 E-value=5.7e-19 Score=177.60 Aligned_cols=306 Identities=12% Similarity=0.029 Sum_probs=198.1
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
|....+...+.+++.+++++++|.+. .+++++|+++++.++.+..+ +++.|+++...|.+
T Consensus 70 ~~~~~g~~~l~~~l~~~l~~~~g~~~---------~i~~~sG~~a~~~a~~~~~~-----------~gd~vi~~~~~~~~ 129 (385)
T TIGR01825 70 VRTIAGTLRLHEELEEKLAKFKKTEA---------ALVFQSGFNTNQGVLSALLR-----------KGDIVLSDELNHAS 129 (385)
T ss_pred cCcccCCcHHHHHHHHHHHHHhCCCc---------EEEECcHHHHHHHHHHHhCC-----------CCCEEEEEccccHH
Confidence 33344557788888888999998653 35555668888877765433 66788889999999
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
+..++...|. +++.++ .+|++++++.+++... .++.+|+.....+++|.+.|+++|.++|++||++++
T Consensus 130 ~~~~~~~~g~---~~~~~~-------~~d~~~l~~~l~~~~~--~~~~~v~~~~v~~~tG~~~~~~~i~~l~~~~~~~li 197 (385)
T TIGR01825 130 IIDGLRLTKA---TKKIYK-------HADMDDLDRVLRENPS--YGKKLIVTDGVFSMDGDVAPLPEIVELAERYGAVTY 197 (385)
T ss_pred HHHHHHhcCC---ceEEeC-------CCCHHHHHHHHHhhcc--CCCeEEEEecCCcCCCCccCHHHHHHHHHHhCCEEE
Confidence 9988888887 665543 5799999998876431 234577777778999999999999999999999999
Q ss_pred eeccccchhccCccc-hhcccCC-cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 268 VDAAYAGSACICPEY-RQYIDGV-EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 268 vD~A~g~~~~~~~~~-~~~~~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+|++|+.+.+..... .....++ ...|.+..+++|+++.+. |+++. +++.+........+|....
T Consensus 198 ~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~~g--G~~~~-~~~~~~~~~~~~~~~~~~~----------- 263 (385)
T TIGR01825 198 VDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGVVG--GYAAG-HKELIEYLKNRARPFLFST----------- 263 (385)
T ss_pred EECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhcCC--CEEec-CHHHHHHHHHhCccccccC-----------
Confidence 999996543321000 0000011 256788899999997542 65544 3333322111111121100
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
.+......++..+++.+.. ..+..++..++++++.+.|+++ ++++. .+..+++.+.+.+ ....
T Consensus 264 -----~~~~~~~~a~~~al~~~~~--~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------~~~~ 326 (385)
T TIGR01825 264 -----AQPPAVVAALAAAVDELQR--SPELMERLWDNTRFFKAGLGKL-GYDTG-GSETPITPVVIGD--------EKAA 326 (385)
T ss_pred -----CCCHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHHc-CCCCC-CCCCCEEEEEECC--------HHHH
Confidence 0001111233344443311 1245677778899999999887 78765 3444555555432 1123
Q ss_pred HHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
..+.+.|.++|. .+.+..+ .+..++|+++ +..++++|+++++++|+++.++
T Consensus 327 ~~~~~~L~~~gi-~v~~~~~~~~~~~~~~iRi~~-~~~~~~e~i~~~~~~l~~~~~~ 381 (385)
T TIGR01825 327 QEFSRRLFDEGI-FAQSIVFPTVPRGTARIRNIP-TAEHTKDDLDQALDAYEKVGKE 381 (385)
T ss_pred HHHHHHHHHCCc-EEcccCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHHHHHHHHH
Confidence 567888888874 4443222 2446899998 7789999999999999988754
No 112
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.86 E-value=7.9e-19 Score=178.20 Aligned_cols=330 Identities=17% Similarity=0.124 Sum_probs=206.2
Q ss_pred HHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccC
Q 041829 93 LGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNS 172 (486)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~ 172 (486)
+.+...+++..+...|..+++..+++++ +++++|.+. +++|.|||+|+..++.+..+
T Consensus 59 ~~~a~~~a~~~g~~~Y~~~~g~~~Lrea----ia~~~~~~~---------vv~t~ggt~A~~~~~~all~---------- 115 (460)
T PRK13238 59 MSDRQWAAMMRGDEAYAGSRSYYRLEDA----VKDIFGYPY---------TIPTHQGRAAEQILFPVLIK---------- 115 (460)
T ss_pred hhHHHHHHHHhCCcccCCCCCHHHHHHH----HHHHhCCCc---------EEECCCHHHHHHHHHHHhCC----------
Confidence 3444434443444578888999999998 777777643 79999999999888766533
Q ss_pred CCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC------CCC--ccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 173 LEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS------TNY--SLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 173 ~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~------~~~--~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
+++ |+++...+.+....+...|. +++.+|+++. +.| .+|+++|+++|.+... .++.+|+++.++|
T Consensus 116 -pGD-Vii~~p~~~~~~~~i~~~G~---~~v~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~--~~tk~Ivl~~p~N 188 (460)
T PRK13238 116 -KGD-VVPSNYHFDTTRAHIELNGA---TAVDLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGA--ENVPFIVMTITNN 188 (460)
T ss_pred -CCC-EEccCCcccchHHHHHHcCC---EEEEEeccccccccccccccCCcCHHHHHHHHhhcCC--CceeEEEEecCCC
Confidence 666 66676645556666888899 9999998641 124 4999999999975321 2356899999999
Q ss_pred ccc-cc---CChHHHHHHHHHhCCEEEeeccccc-hhccCc----cchhc-ccC-----CcCCCceeeecccccCCCCcc
Q 041829 245 SST-AV---DPLLALGNIAKSNGMWFHVDAAYAG-SACICP----EYRQY-IDG-----VEEADSFNMNAHKWFLTNFDC 309 (486)
Q Consensus 245 ~tG-~i---d~l~~I~~ia~~~g~~lhvD~A~g~-~~~~~~----~~~~~-~~~-----~~~aDs~~~~~hK~l~~p~~~ 309 (486)
++| .+ +++++|+++|++||+++++|+|+.. ..++.. .+... +.. .+.+|++++++||.+++|.|
T Consensus 189 ptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~G- 267 (460)
T PRK13238 189 SAGGQPVSMANLRAVYEIAKKYGIPVVIDAARFAENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNIG- 267 (460)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEECcchhhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcce-
Confidence 998 44 5578999999999999999998743 122211 01110 000 13689999999999999975
Q ss_pred eEEEEeCchHHHHHhcCC---cccccccccccCCccCCCCCccCCCCCCC-cHHHHHHHHH-hChhhHHHHHHHHHHHHH
Q 041829 310 SALWVKDRNTLIQSLSTN---PEFLKNKASQANMVVDYKDWQIPLGRRFR-SLKLWMVLRL-YGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 310 g~l~~r~~~~~~~~~~~~---~~yl~~~~~~~~~~~~~~~~~~~~sr~~~-~l~~~~~l~~-~g~~g~~~~~~~~~~~a~ 384 (486)
|+++.++.+.+.+.-... .+++ ..++-... ..++..+++. ...+ .++...+.++
T Consensus 268 G~i~~~d~~l~~~~~~~~~~~~g~~-----------------t~~g~~~~~~~Ala~~l~e~~~~~----~~~~~~~~~~ 326 (460)
T PRK13238 268 GLLCFRDEDLFTECRTLCILYEGFP-----------------TYGGLAGRDMEALAVGLYEGMDED----YLAYRIGQVE 326 (460)
T ss_pred eEEEcChHHHHHHhhhcccccCCcc-----------------cccCcHHHHHHHHHhhHHHhhChH----HHHHHHHHHH
Confidence 888888755444321111 1111 01111111 1122223332 1222 3333344578
Q ss_pred HHHHHHhcCCCeEEecCCCceEEEEEecCC--CCCcccchHHHHHHHHHHHccCcE-EEEeeeE-------CC------E
Q 041829 385 HFEGLVAQDLRFEVVTPRIFSLVCFRLLPP--HNDEDHGNKLNHKLLDDINSTGKI-FISHTVL-------SG------K 448 (486)
Q Consensus 385 ~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~~-------~~------~ 448 (486)
+|.+.|++. |+.++.+.....+...+..- ........ ..++...|.++.++ .+..+.+ .+ .
T Consensus 327 ~l~~~L~~~-G~~~~~p~Gg~~v~~d~~~~~~~~~~~~~~--~~~~a~~L~~e~GV~~~~~~~f~~~~~~~~~~~~~~~~ 403 (460)
T PRK13238 327 YLGEGLEEA-GVPIQTPAGGHAVFVDAGKFLPHIPAEQFP--AQALACELYLEAGIRGVEIGSLLLGRDPKTGEQLPAPA 403 (460)
T ss_pred HHHHHHHHC-CCCeEccCCceEEEEEchhcCCCCCCCCCc--hHHHHHHHHHHcCeeeecccceecccCCCCccccCCcc
Confidence 999999887 89988655444444444321 00000011 24566666654434 3333321 12 4
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 449 YILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 449 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
..+|+++.-..-|.++++.+.++|+++.+
T Consensus 404 ~~~Rla~~rr~~~~~~~~~~~~~l~~~~~ 432 (460)
T PRK13238 404 ELLRLAIPRRVYTQSHMDYVAEALKAVKE 432 (460)
T ss_pred ceEEEecccccCCHHHHHHHHHHHHHHHH
Confidence 79999995545599999999999998874
No 113
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.86 E-value=3.9e-19 Score=166.85 Aligned_cols=334 Identities=12% Similarity=0.029 Sum_probs=231.0
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
|..+.+.+....+.....|. -...++-+++.+|.++..++.... ...+++.|-- .++..+.+...+
T Consensus 40 pp~i~~Al~~rvdhGvfGY~--~~~~~~~~ai~~w~~~r~~~~i~~-----e~i~~~p~VV----pgi~~~I~~~T~--- 105 (388)
T COG1168 40 PPEIIEALRERVDHGVFGYP--YGSDELYAAIAHWFKQRHQWEIKP-----EWIVFVPGVV----PGISLAIRALTK--- 105 (388)
T ss_pred CHHHHHHHHHHHhcCCCCCC--CCCHHHHHHHHHHHHHhcCCCCCc-----ceEEEcCcch----HhHHHHHHHhCc---
Confidence 34566667766666656665 334679999999999999986541 2456666543 344333333221
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCC-CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTD-SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~-~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|++..+.++.+.++....|- +++..|+. .++.|.||.++||+++.+.. +.+.+.+.|.||+|.
T Consensus 106 ----~gd~Vvi~tPvY~PF~~~i~~n~R---~~i~~pL~~~~~~y~iD~~~LE~~~~~~~-----vkl~iLCnPHNP~Gr 173 (388)
T COG1168 106 ----PGDGVVIQTPVYPPFYNAIKLNGR---KVIENPLVEDDGRYEIDFDALEKAFVDER-----VKLFILCNPHNPTGR 173 (388)
T ss_pred ----CCCeeEecCCCchHHHHHHhhcCc---EEEeccccccCCcEEecHHHHHHHHhcCC-----ccEEEEeCCCCCCCc
Confidence 778888899999999999999998 99999987 45668999999999998753 357899999999999
Q ss_pred c---CChHHHHHHHHHhCCEEEeeccccchhccCccchhcc-cCCcCCC--ceeeecccccCCC-CcceEEEEeCchHHH
Q 041829 249 V---DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI-DGVEEAD--SFNMNAHKWFLTN-FDCSALWVKDRNTLI 321 (486)
Q Consensus 249 i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~-~~~~~aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~ 321 (486)
+ +.|.+|++||++||+.++.|.-|+-..+....+-... .....+| ..+.++.|.++.+ ..|+.+++.+++...
T Consensus 174 vwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSKtFNlaGL~~a~~Ii~n~~lr~ 253 (388)
T COG1168 174 VWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASKTFNLAGLKCAYIIISNRELRA 253 (388)
T ss_pred cccHHHHHHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhhhcceEEEeeccccccchhhhheeEEecCHHHHH
Confidence 9 7899999999999999999999876554432221111 1111234 4456679999866 458888888775322
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-CCCeEEec
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ-DLRFEVVT 400 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~-~~~~~~~~ 400 (486)
.+...-.... ..+-..-++.++.+.-..|.+.+.++.+...++.+++.+.+.+ +|++++..
T Consensus 254 -~~~~~l~~~~-----------------~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~v~v~~ 315 (388)
T COG1168 254 -KFLKRLKRNG-----------------LHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPGVKVTE 315 (388)
T ss_pred -HHHHHHHHhc-----------------CCCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhhCCCcEEec
Confidence 2111111110 0111111223333333459999999999999999999999976 78999987
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---SGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+....+....+.+-+. + ..++.+.|.++.++.++.+.. .|++++|+.+ .++++-+++.++.|....+
T Consensus 316 p~gTYL~WLD~r~l~l-----~--d~~l~~~ll~~akVal~~G~~FG~~g~gf~RlN~---acpr~~L~eal~ri~~al~ 385 (388)
T COG1168 316 PQGTYLAWLDCRELGL-----D--DSELAEFLLEEAKVALSPGSTFGEEGSGFVRLNF---ACPRAILEEALERLKRALK 385 (388)
T ss_pred CCCceeeeeeccccCC-----C--hHHHHHHHHHhhcEeccCCCccCcCCCceEEEec---CCCHHHHHHHHHHHHHHHh
Confidence 7777777777765331 1 146677777777788776532 4678999977 5577788888888876654
No 114
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.86 E-value=7.4e-20 Score=181.20 Aligned_cols=308 Identities=14% Similarity=0.062 Sum_probs=198.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEE-cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVI-QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
..++.+.++-+++.+.+++++|.++++ ..+| ++|||.++..++..... ++ .++++...|.+
T Consensus 34 hr~~~f~~~~~~~r~~l~~l~~~~~~~------~v~f~~gs~T~a~~~~~~~l~~-----------~~-~l~i~~G~~~~ 95 (361)
T TIGR01366 34 HRQAPVKNLVGRVREGLAELFSLPDGY------EVILGNGGATAFWDAATFGLIE-----------KK-SLHLSFGEFSS 95 (361)
T ss_pred cCChHHHHHHHHHHHHHHHHhCCCCCc------eEEEECCchhHHHHHHHHhccc-----------cc-ccEEecCHHHH
Confidence 457888899999999999999986532 3666 47799888777754321 12 23333344433
Q ss_pred -HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 188 -LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 188 -~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
+.+.+....... ++..+++++.+ .++.+ +. ..+.+|++++.+|.+|.+.|+++| +|++|+++
T Consensus 96 ~~~~~a~~~~~~~-~~~~~~~~~~~--~~~~~-----~~------~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~ 158 (361)
T TIGR01366 96 KFAKAVKLAPWLG-EPIIVTADPGS--APEPQ-----AD------PGVDVIAWAHNETSTGVAVPVRRP---EGSDDALV 158 (361)
T ss_pred HHHHHHHhhhccC-CceEEecCCCC--CCCCc-----cC------CCCCEEEEcccCCccceecccccc---cccCCCeE
Confidence 444555432211 56777776532 34432 22 235689999999999999999998 58999999
Q ss_pred EeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCC------cccccccccccCC
Q 041829 267 HVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTN------PEFLKNKASQANM 340 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~------~~yl~~~~~~~~~ 340 (486)
+||++++.+...++- +.+|.+++++||+++.|.|.++++++++. +.+..... +.|+.....
T Consensus 159 iVDavqs~g~~~idv--------~~~D~~~~s~~K~lg~~~Gl~~~~~s~~~-~~~~~~~~~~~~~~p~~~d~~~~---- 225 (361)
T TIGR01366 159 VIDATSGAGGLPVDI--------AETDVYYFAPQKNFASDGGLWLAIMSPAA-LERIEAIAASGRWVPEFLSLPTA---- 225 (361)
T ss_pred EEEcCccccCCCCCH--------HHCCEEEEEchhhcCCCCceEEEEECHHH-HhhhhcccCCCCCCchhhhHHHH----
Confidence 999999877665441 24899999999999998777777777643 32221110 112211100
Q ss_pred ccCCCCCccCCCCCC----C-cHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C--Cce-EEEEE
Q 041829 341 VVDYKDWQIPLGRRF----R-SLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-R--IFS-LVCFR 410 (486)
Q Consensus 341 ~~~~~~~~~~~sr~~----~-~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~--~~~-~v~f~ 410 (486)
.....+.+... . .+++-.+++.+-.+ |++.+.++..++++++++.+.+.+.++++.+ + ... +.++.
T Consensus 226 ----~~~~~~~~t~~tp~i~~i~~l~~al~~l~~~gg~e~~~~r~~~l~~~l~~~l~~~~~~~~~~~~~~~~s~~v~~v~ 301 (361)
T TIGR01366 226 ----VDNSLKNQTYNTPAIATLALLAEQIDWMNGNGGLDWAVARTADSSSRLYSWAQERPYATPFVTDPGKRSQVVGTID 301 (361)
T ss_pred ----HhccccCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhCCCcccCCCChhhcccceEEEE
Confidence 00001111111 1 13566777777666 6899999999999999999999976776532 2 122 23344
Q ss_pred ecCCCCCcccchHHHHHHHHHHHccCcEEEEee-eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 411 LLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT-VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
+ +.+ . ...++.+.|.++|.+...+. .+. ..++|+++ +.++|.+||++++++|+++.++
T Consensus 302 ~-~~g-----~--~~~~v~~~L~~~gI~i~~~~~~l~-~~~vRis~-~~~~t~~di~~l~~al~~~~~~ 360 (361)
T TIGR01366 302 F-VDD-----I--DAATVAKILRANGIVDTEPYRKLG-RNQLRVAM-FPAIDPDDVEALTECVDWVVER 360 (361)
T ss_pred C-CCc-----c--CHHHHHHHHHHCCCeeccCccccC-CCcEEEEc-CCCCCHHHHHHHHHHHHHHHhh
Confidence 4 222 1 12456677777775432222 222 35899999 7799999999999999998765
No 115
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.86 E-value=3.2e-19 Score=178.88 Aligned_cols=323 Identities=14% Similarity=0.115 Sum_probs=202.4
Q ss_pred HHHHHHHHHhcCcCc-cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 91 GFLGEMLSAGLNIVG-FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~-~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
..+.+.+...++... ..|....+..++++. +++++|.+++ +.++|+|+|+++..++.+...
T Consensus 44 ~~~~~a~~~~~~~~~~~~y~~~~g~~~lr~~----ia~~l~~~~~-------~v~~~~g~t~al~~~~~~~~~------- 105 (380)
T PRK06225 44 EEVREAMIRCIEEGEYCKYPPPEGFPELREL----ILKDLGLDDD-------EALITAGATESLYLVMRAFLS------- 105 (380)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCcchHHHHHH----HHHhcCCCCC-------cEEEeCCHHHHHHHHHHHhcC-------
Confidence 334455555554322 223222234445544 8888898764 699999999998887765432
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCC-CCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDS-STNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~-~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|++++..|.....+++..|. +++.+|++. .++|.+|+++|++++++. +.+|+++.++|+||.
T Consensus 106 ----~gd~vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~ 172 (380)
T PRK06225 106 ----PGDNAVTPDPGYLIIDNFASRFGA---EVIEVPIYSEECNYKLTPELVKENMDEN------TRLIYLIDPLNPLGS 172 (380)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHhCc---eEEeeccccccCCccCCHHHHHhhcCCC------ceEEEEeCCCCCCCc
Confidence 566788888888888888999999 999999753 234789999999988653 346777889999999
Q ss_pred c---CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCC-cCCCceeeecccccCCC-CcceEEEEeCchHHHHH
Q 041829 249 V---DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGV-EEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQS 323 (486)
Q Consensus 249 i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~-~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~ 323 (486)
+ +++++|+++|+++|+++++|++|+.+....+. ...+ .....+..++.|+++.| ..+|+++.++ ..+. .
T Consensus 173 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~----~~~~~~~~~i~~~s~SK~~g~~G~RiG~i~~~~-~l~~-~ 246 (380)
T PRK06225 173 SYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTL----AAEYAPEHTVTSYSFSKIFGMAGLRIGAVVATP-DLIE-V 246 (380)
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCc----hhhcCCCCEEEEeechhhcCCccceeEEEecCH-HHHH-H
Confidence 7 45999999999999999999998654321110 0111 12234556778999644 3478888753 3332 2
Q ss_pred hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cCC
Q 041829 324 LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV-TPR 402 (486)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~~~ 402 (486)
+.. +.... + +........+...+.. ..+.+++..+...++.+.+.+.|++++++.+. .++
T Consensus 247 ~~~---~~~~~------------~---~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~ 307 (380)
T PRK06225 247 VKS---IVIND------------L---GTNVIAQEAAIAGLKV-KDEWIDRIRRTTFKNQKLIKEAVDEIEGVFLPVYPS 307 (380)
T ss_pred HHH---HHhcc------------c---CCCHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHHHHHHhCcCCccccCCC
Confidence 211 00000 0 0001111122222322 22334444455556677888899887776442 344
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
..+++.+.+.+.+ .+ ..++.+.|.+.| +++.+... .+..++|+++ + .+++++++++++|+++.++
T Consensus 308 ~g~~~~~~~~~~~-----~~--~~~l~~~l~~~g-i~v~~g~~~~~~~~~~~iR~s~-~--~~~e~l~~~~~~l~~~~~~ 376 (380)
T PRK06225 308 HGNMMVIDISEAG-----ID--PEDLVEYLLERK-IFVRQGTYTSKRFGDRYIRVSF-S--IPREQVEVFCEEFPDVVET 376 (380)
T ss_pred CCeEEEEEccccc-----CC--HHHHHHHHHHCC-EEEcCCcccCcCCCCceEEEEe-C--CCHHHHHHHHHHHHHHHHH
Confidence 5556666664321 11 246777777777 45544321 2346899999 3 3789999999999999886
Q ss_pred HH
Q 041829 479 LL 480 (486)
Q Consensus 479 l~ 480 (486)
+.
T Consensus 377 ~~ 378 (380)
T PRK06225 377 LR 378 (380)
T ss_pred hh
Confidence 64
No 116
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.86 E-value=7.9e-19 Score=175.08 Aligned_cols=305 Identities=14% Similarity=0.062 Sum_probs=199.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHH--HHHhCccC-CCCeEEEecCCCchhHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKA--LKRVGKNS-LEKLVVYASDQTHSALQ 189 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~--~~~~~~~~-~~~~~v~~s~~~H~s~~ 189 (486)
...++|++ |++++|.+. .+++++|..||+.++.+..... +...+... .+++.|+.....|.|+.
T Consensus 148 ~h~~LE~~----LA~f~g~e~---------all~sSGy~AN~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~ 214 (476)
T PLN02955 148 YHRLLESS----LADLKKKED---------CLVCPTGFAANMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASII 214 (476)
T ss_pred HHHHHHHH----HHHHHCCCc---------EEEECChHHHHHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHH
Confidence 33456666 999999876 6888899999988876542100 00000000 15668899999999999
Q ss_pred HHHHHhCC-CCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 190 KACQIGGI-HPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~~g~-g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
.++++... |..+++.++ +-|+++|++++++... ...+|++....++.|.+-|+++|.++|++||++++|
T Consensus 215 dG~~ls~~~~~a~~~~f~-------HND~~~Le~~L~~~~~---~~~~Vv~EgV~SmdGdiapL~eL~~L~~~~ga~LiV 284 (476)
T PLN02955 215 DGVRLAERQGNVEVFVYR-------HCDMYHLNSLLSSCKM---KRKVVVTDSLFSMDGDFAPMEELSQLRKKYGFLLVI 284 (476)
T ss_pred HHHHhccccCCceEEEeC-------CCCHHHHHHHHHhCCC---CceEEEEeCCCCCCCCcCCHHHHHHHHHHcCcEEEE
Confidence 99998732 111566555 4599999999976532 235678888899999999999999999999999999
Q ss_pred eccccchhccCccchhcc--cCC-cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 269 DAAYAGSACICPEYRQYI--DGV-EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~--~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
|.||+.+.+ .+..+... .++ ...|.++.+.-|.++.. .|+++.+ +...........+|++....
T Consensus 285 DEAH~~Gv~-G~~G~G~~e~~g~~~di~ii~~TLsKA~G~~--GGfi~gs-~~~~~~l~~~~~~~ifStal--------- 351 (476)
T PLN02955 285 DDAHGTFVC-GENGGGVAEEFNCEADVDLCVGTLSKAAGCH--GGFIACS-KKWKQLIQSRGRSFIFSTAI--------- 351 (476)
T ss_pred cccccCcee-cCCCCcHHHHhCCCCCCcEEEEeCccchhcc--CceeecH-HHHHHHHHHhCCCCeecccc---------
Confidence 999986543 22222211 122 36788999999998754 3555544 33332222234455443210
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
....+.+..++++.+-.+ ..+.++..++.++|++.+ |+.+ ..+++.+.+.. +...
T Consensus 352 -------pp~~aaa~laal~l~~~~--~~~r~~L~~n~~~fr~~~----G~~~----~sPI~pI~ig~--------~~~a 406 (476)
T PLN02955 352 -------PVPMAAAAYAAVVVARKE--KWRRKAIWERVKEFKALS----GVDI----SSPIISLVVGN--------QEKA 406 (476)
T ss_pred -------cHHHHHHHHHHHHHHhcC--HHHHHHHHHHHHHHHHhc----CCCC----CCCEEEEEeCC--------HHHH
Confidence 001111222333333222 245677788888888742 5542 35677766642 4455
Q ss_pred HHHHHHHHccCcEEEE----eeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFIS----HTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~----~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
..+.++|.++|. ++. |+...+...+|+++ +..+|++||++++++|.++.+.+.
T Consensus 407 ~~~~~~L~~~Gi-~v~~i~yPtVP~g~~rLRi~l-sA~Ht~edId~lv~~L~~~~~~~~ 463 (476)
T PLN02955 407 LKASRYLLKSGF-HVMAIRPPTVPPNSCRLRVTL-SAAHTTEDVKKLITALSSCLDFDN 463 (476)
T ss_pred HHHHHHHHHCCC-EEEEECCCCCCCCCceEEEee-CCCCCHHHHHHHHHHHHHHHhhhc
Confidence 678888999984 444 33446777899999 888999999999999998876543
No 117
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.86 E-value=6.4e-19 Score=177.78 Aligned_cols=326 Identities=10% Similarity=0.041 Sum_probs=212.7
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...++.. ...|. .++..++.+.+.+|+.+..|.+.+. ..+.++|+|+++++..++.+..+
T Consensus 47 ~~~~~~~~~~~~~~~~~~~y~-~~G~~~lr~aia~~~~~~~g~~~~~----~~~I~it~G~~~al~~~~~~~~~------ 115 (399)
T PRK07681 47 ADFVREEMVHTANQKESYGYT-LSGIQEFHEAVTEYYNNTHNVILNA----DKEVLLLMGSQDGLVHLPMVYAN------ 115 (399)
T ss_pred CHHHHHHHHHHHhccccCCCC-CCCcHHHHHHHHHHHHHHhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 344566665555432 22232 3577889999999999888864320 02588899999887766654433
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..+|+.+...++.+|+ +++.+|+++++.|.+|+++|++++.+. +.+|+++.++||||.
T Consensus 116 -----~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~v~l~~P~NPTG~ 181 (399)
T PRK07681 116 -----PGDIILVPDPGYTAYETGIQMAGA---TSYYMPLKKENDFLPDLELIPEEIADK------AKMMILNFPGNPVPA 181 (399)
T ss_pred -----CCCEEEECCCCccchHHHHHhcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCcCc
Confidence 678899999999999999999999 999999987656889999999888543 357888889999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC---CCceeeecccccCCC-CcceEEEEeCchHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE---ADSFNMNAHKWFLTN-FDCSALWVKDRNTLI 321 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~---aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~ 321 (486)
+-+ +++|+++|+++|+|+++|.+|+.+........... .+.. -..+..++.|.++.| .-+|+++. ++..+.
T Consensus 182 ~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~~~~-~~~~~~~~~i~~~S~SK~~~~~GlRiG~~i~-~~~l~~ 259 (399)
T PRK07681 182 MAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFL-SVPGAKEVGVEINSLSKSYSLAGSRIGYMIG-NEEIVR 259 (399)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCCChh-hCCCCcccEEEEeecccccCCccceeEEEec-CHHHHH
Confidence 966 78899999999999999999986543211111111 1111 224456789998744 45888875 443332
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.+.....+.. . ....+...++...+ +.+.+++..++..++.+.+.+.|+++ ++++.
T Consensus 260 -~~~~~~~~~~------------------~--~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~ 317 (399)
T PRK07681 260 -ALTQFKSNTD------------------Y--GVFLPIQKAACAALRNGAAFCEKNRGIYQERRDTLVDGFRTF-GWNVD 317 (399)
T ss_pred -HHHHHHhhcc------------------c--CCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 2221111000 0 01112222333332 34556677777788888999999987 78765
Q ss_pred cCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 400 TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 400 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+.....+.+++.+ . .+ ..++...+.+ .| +.+.+. .+. +.+++|++++ .+++++++++++|++.
T Consensus 318 ~p~~g~f~~~~l~~-~-----~~--~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~iRis~~---~~~~~~~~~l~~l~~~ 385 (399)
T PRK07681 318 KPAGSMFVWAEIPK-G-----WT--SLSFAYALMDRAN-VVVTPGHAFGPHGEGFVRIALV---QDEEVLQQAVENIRNS 385 (399)
T ss_pred CCCeeeEEEEECCC-C-----CC--HHHHHHHHHHhCC-EEEeCChhhCcCCCCeEEEEec---CCHHHHHHHHHHHHHh
Confidence 44444444445532 1 11 2457777776 56 444443 332 3468999993 3689999999999885
Q ss_pred H
Q 041829 476 A 476 (486)
Q Consensus 476 ~ 476 (486)
.
T Consensus 386 ~ 386 (399)
T PRK07681 386 G 386 (399)
T ss_pred c
Confidence 4
No 118
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.86 E-value=7.4e-19 Score=180.49 Aligned_cols=322 Identities=14% Similarity=0.099 Sum_probs=210.8
Q ss_pred cccChhhHHHHHHHHHHHHHHcC----CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCC
Q 041829 108 WITSPAATELEMIVLDWLAKLLK----LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQ 183 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (486)
|....+..++.+++.+|+.+.+| ++++ ..++|+|+++++..++.+..+ +++.|+++..
T Consensus 90 y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe-------~Ivit~Ga~~al~~l~~~l~~-----------pGD~Vlv~~P 151 (496)
T PLN02376 90 FQDYHGLKKFRQAIAHFMGKARGGKVTFDPE-------RVVMSGGATGANETIMFCLAD-----------PGDVFLIPSP 151 (496)
T ss_pred cCCCCCcHHHHHHHHHHHHHHhCCCCcCChh-------hEEEccchHHHHHHHHHHhCC-----------CCCEEEECCC
Confidence 44456678899999999999887 4443 689999999988777765544 7888999999
Q ss_pred CchhHHHHHH-HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHH
Q 041829 184 THSALQKACQ-IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIA 259 (486)
Q Consensus 184 ~H~s~~~a~~-~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia 259 (486)
.+..+...++ ..|+ +++.||++.+++|.+|++++++++++..+.+.++.+|+++.++||||.+-+ +++|+++|
T Consensus 152 ~Y~~~~~~~~~~~G~---~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a 228 (496)
T PLN02376 152 YYAAFDRDLRWRTGV---EIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFV 228 (496)
T ss_pred CccchHHHHHhhCCC---EEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHH
Confidence 9999998777 4899 999999976556899999999887655444556778888999999999966 67788899
Q ss_pred HHhCCEEEeeccccchhccCccchhcccCCc-------CCC--ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcc
Q 041829 260 KSNGMWFHVDAAYAGSACICPEYRQYIDGVE-------EAD--SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-------~aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|+++++|.+|+...+..+.+.....-+. ..+ .+..++.|.++.| .-+|+++..++. +.........
T Consensus 229 ~~~~i~lI~DEiY~~~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~glpGlRvG~li~~~~~-l~~~~~~~~~ 307 (496)
T PLN02376 229 TRKNIHLVVDEIYAATVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDMGLPGFRVGIVYSFNDS-VVSCARKMSS 307 (496)
T ss_pred HHcCCEEEEEcCccccccCCCCcccHHHhhccccccccCCCeEEEEEeccccCCCCcceEEEEEECCHH-HHHHHHHHhh
Confidence 9999999999999876443222222111011 112 2356899999755 669998886544 3222211111
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-----hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-----ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIF 404 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 404 (486)
+. ....+..+++...+.. +.+++..++..+..+.+.+.|++. +++++. +..
T Consensus 308 ~~----------------------~vs~~~Q~a~~~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~-gi~~~~-~~a 363 (496)
T PLN02376 308 FG----------------------LVSSQTQLMLASMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA-DIACLT-SNA 363 (496)
T ss_pred cC----------------------CCCHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCcccC-CCc
Confidence 10 0112233333333322 123334555666777788888876 777654 454
Q ss_pred eEEE-EEecCCCCCcccchHHHHHHHHHHHccCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 405 SLVC-FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 405 ~~v~-f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
++++ +++..... ....-+...++.+.+.++.++.+.++ .+. +.+++|+++++ .+++.++..+++|.++.++
T Consensus 364 G~flwi~l~~~~~-~~~~~~~e~~l~~~ll~~~gV~v~pGs~F~~~~~g~~Ri~fa~--~~~~~l~~al~rl~~~l~~ 438 (496)
T PLN02376 364 GLFAWMDLRHLLR-DRNSFESEIELWHIIIDKVKLNVSPGSSFRCTEPGWFRICFAN--MDDDTLHVALGRIQDFVSK 438 (496)
T ss_pred eEEEEEEchhhhc-cCCchhHHHHHHHHHHHcCCEEEeCccccCCCCCCEEEEEeeC--CCHHHHHHHHHHHHHHHHH
Confidence 4444 44432110 00011122467777776533555554 342 35799999943 3578999999999888764
No 119
>PRK08363 alanine aminotransferase; Validated
Probab=99.86 E-value=4.7e-19 Score=178.79 Aligned_cols=335 Identities=9% Similarity=0.050 Sum_probs=213.0
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+...+......|...++..++++.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 115 (398)
T PRK08363 48 PEHMKEAYCRAIKEGHNYYGPSEGLPELREAIVKREKRKNGVDIT-----PDDVRVTAAVTEALQLIFGALLD------- 115 (398)
T ss_pred CHHHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhCC-------
Confidence 344445555444332234555677899999999988887775332 12688999999988877765432
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEE-eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVL-KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v-~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..+|..+...++.+|. .++.+ +.+++ ++.+|++.|++++++. +.+|+++.++|+||.
T Consensus 116 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~v~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~ 181 (398)
T PRK08363 116 ----PGDEILIPGPSYPPYTGLVKFYGG---VPVEYRTIEEE-GWQPDIDDIRKKITEK------TKAIAVINPNNPTGA 181 (398)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHcCC---EEEEecccccc-CCcCCHHHHHhhCCcc------eEEEEEECCCCCCCc
Confidence 678899999999999999999998 88887 45543 4789999999888543 357888899999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCC-ce-eeecccccC-CCCcceEEEEe-CchHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEAD-SF-NMNAHKWFL-TNFDCSALWVK-DRNTLI 321 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aD-s~-~~~~hK~l~-~p~~~g~l~~r-~~~~~~ 321 (486)
+-+ +++|+++|+++|+++++|++|+.+.+. +.... ...+...+ .+ ..++.|+++ ....+|++++. ++..+.
T Consensus 182 ~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~-~~~~~-~~~~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~~~~~~~ 259 (398)
T PRK08363 182 LYEKKTLKEILDIAGEHDLPVISDEIYDLMTYE-GKHVS-PGSLTKDVPVIVMNGLSKVYFATGWRLGYIYFVDPEGKLA 259 (398)
T ss_pred CcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccC-CcccC-HHHcCcCCcEEEEecchhccCCccceEEEEEEeCcHHHHH
Confidence 866 889999999999999999999864321 11111 11121222 33 567899954 45678998873 332221
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
........+... .. +...+....+..++.. ..+.+++..++..++.+++.+.|++++++++. +
T Consensus 260 ~l~~~~~~~~~~--------------~~-~~s~~~q~~~~~~l~~-~~~~l~~~~~~~~~~~~~l~~~L~~~~~~~~~-~ 322 (398)
T PRK08363 260 EVREAIDKLARI--------------RL-CPNTPAQFAAIAGLTG-PMDYLEEYMKKLKERRDYIYKRLNEIPGISTT-K 322 (398)
T ss_pred HHHHHHHHHhcc--------------cc-cCChHHHHHHHHHHhC-ChHHHHHHHHHHHHHHHHHHHHHhcCCCCEec-C
Confidence 111000000000 00 0001111122222322 35667777888888999999999998888754 5
Q ss_pred CCceEEEE-EecCCCCCcccchHHHHHHH-HHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 402 RIFSLVCF-RLLPPHNDEDHGNKLNHKLL-DDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 402 ~~~~~v~f-~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
|..+++.| ++.+... .+ ..++. ..+.+.|.....+..+. +..++|+++ . .++++++..++.|+++.+
T Consensus 323 p~g~~~~~~~l~~~~~----~~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~-~--~~~~~l~~~l~~l~~~~~ 393 (398)
T PRK08363 323 PQGAFYIFPRIEEGPW----KD--DKEFVLDVLHEAHVLFVHGSGFGEYGAGHFRLVF-L--PPVEILEEAMDRFEEFMR 393 (398)
T ss_pred CCeEEEEEEEeccCCC----CC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHH
Confidence 66676665 4543100 01 12343 33456674444444332 346999999 3 368999999999988776
Q ss_pred H
Q 041829 478 A 478 (486)
Q Consensus 478 ~ 478 (486)
+
T Consensus 394 ~ 394 (398)
T PRK08363 394 E 394 (398)
T ss_pred H
Confidence 5
No 120
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.86 E-value=7.5e-19 Score=175.07 Aligned_cols=290 Identities=14% Similarity=0.125 Sum_probs=188.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG 196 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g 196 (486)
+..++.+.+++++|.+. .+++++|+++++.++.+... +++.|+++...|.+...+++..|
T Consensus 62 ~~~~l~~~la~~~~~~~---------~i~~~~G~~~~~~~l~~~~~-----------~gd~v~~~~~~~~~~~~~~~~~g 121 (360)
T TIGR00858 62 LHEELEEELAEWKGTEA---------ALLFSSGYLANVGVISALVG-----------KGDLILSDALNHASLIDGCRLSG 121 (360)
T ss_pred HHHHHHHHHHHHhCCCC---------EEEECchHHHHHHHHHHhCC-----------CCCEEEEEccccHHHHHHHHhcC
Confidence 33444455788787543 46666678887766554322 67788889999999999999999
Q ss_pred CCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchh
Q 041829 197 IHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSA 276 (486)
Q Consensus 197 ~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~ 276 (486)
+ +++.++ .+|+++|++++++.. +.++.+|++....+++|.+.|+++|.++|+++|+++++|++|+.+.
T Consensus 122 ~---~~~~~~-------~~d~~~l~~~~~~~~--~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~li~De~~~~~~ 189 (360)
T TIGR00858 122 A---RVRRYR-------HNDVEHLERLLEKNR--GERRKLIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGV 189 (360)
T ss_pred C---ceEEec-------CCCHHHHHHHHHHcc--cCCCeEEEEeCCccCCCCCcCHHHHHHHHHHcCcEEEEECcccccC
Confidence 8 887766 358999999986532 1124577777788999999999999999999999999999997443
Q ss_pred ccCccch-hcccCC--cCCCceeeecccccCCCCcceEEEEeCchHHHHHhc-CCcccccccccccCCccCCCCCccCCC
Q 041829 277 CICPEYR-QYIDGV--EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLS-TNPEFLKNKASQANMVVDYKDWQIPLG 352 (486)
Q Consensus 277 ~~~~~~~-~~~~~~--~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~~s 352 (486)
+...... ....++ ...|.+..+++|+++.+ | |+++.+ ++... .+. ....+. ...+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~~-g-G~~~~~-~~~~~-~~~~~~~~~~-----------------~~~~ 248 (360)
T TIGR00858 190 LGEDGRGTLEHFGLKPEPVDIQVGTLSKALGSY-G-AYVAGS-QALID-YLINRARTLI-----------------FSTA 248 (360)
T ss_pred cCCCCCchHHhcCCCccCCcEEEEechhhhhcc-C-cEEEcC-HHHHH-HHHHhCccce-----------------ecCC
Confidence 2111000 001112 25678888999999764 3 666543 33222 221 111111 0111
Q ss_pred CC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHH
Q 041829 353 RR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDD 431 (486)
Q Consensus 353 r~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 431 (486)
.. ....++.++++.+. ..+++.++..++++++.+.|+++ ++++. ++..+++.+.+.. .....++.++
T Consensus 249 ~~~~~~~a~~~al~~~~--~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~~~~~~~~~~~--------~~~~~~~~~~ 316 (360)
T TIGR00858 249 LPPAVAAAALAALELIQ--EEPWRREKLLALIARLRAGLEAL-GFTLM-PSCTPIVPVIIGD--------NASALALAEE 316 (360)
T ss_pred CCHHHHHHHHHHHHHHh--hCHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCCCEEEEEeCC--------HHHHHHHHHH
Confidence 11 11123334444332 23567788999999999999987 67765 4555677777642 1223568888
Q ss_pred HHccCcEEEEeee----ECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 432 INSTGKIFISHTV----LSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 432 l~~~g~~~~~~~~----~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
|.++| +++.+.. ..+..++|+++ +..++++|+++++++|+
T Consensus 317 l~~~g-I~v~~~~~~~~~~~~~~iRis~-~~~~~~~~i~~~l~~l~ 360 (360)
T TIGR00858 317 LQQQG-IFVGAIRPPTVPAGTSRLRLTL-SAAHTPGDIDRLAEALK 360 (360)
T ss_pred HHHCC-eeEeeeCCCCCCCCCceEEEEE-cCCCCHHHHHHHHHhhC
Confidence 88777 4444321 13445899999 77889999999999873
No 121
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.86 E-value=9.3e-20 Score=179.21 Aligned_cols=308 Identities=12% Similarity=0.045 Sum_probs=200.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEc-CchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQ-GTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
.++.+.++-+++.+.++++|+.+.++ ..+++ +|||+|+..++..... .+.+.+++..+...|. +
T Consensus 31 r~~~f~~~~~~~~~~l~~l~~~~~~~------~v~~~~gsgT~a~ea~~~nl~~--------~~~~~l~i~~G~fg~r-~ 95 (349)
T TIGR01364 31 RSKEFEAVANEAESDLRELLNIPDNY------EVLFLQGGATGQFAAVPLNLLA--------EGKVADYIVTGAWSKK-A 95 (349)
T ss_pred CchHHHHHHHHHHHHHHHHhCCCCCc------eEEEEcCCchHHHHHHHHhcCC--------CCCeEEEEECCHHHHH-H
Confidence 45667789999999999999985432 35555 5599888777654321 1112334443444443 4
Q ss_pred HHHHHHhCCCCCCeEEEeCCCCCC--CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 189 QKACQIGGIHPQNFRVLKTDSSTN--YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 189 ~~a~~~~g~g~~~v~~v~~~~~~~--~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
.+.|+.+|+ +..++.++... -.+|++.++. + ..+.+|.+++..|.||...| ++++.+++.+
T Consensus 96 ~~~a~~~g~----~~~~~~~~~~~~~~~~~~~~~~~--~------~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~ 158 (349)
T TIGR01364 96 AKEAKKYGV----VNVVASGKEGNYTKIPDPSTWEI--S------EDAAYVHYCANETIHGVEFR-----ELPDVKNAPL 158 (349)
T ss_pred HHHHHHhCC----cEEEeccccCCCCCCCCHHhcCC--C------CCCCEEEEcCCCCcccEecc-----eecccCCCeE
Confidence 677777777 23334321110 1456665552 1 13568999999999999876 7777889999
Q ss_pred EeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 267 HVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
+||++++.+....+- +..|.+.+++||+++ |.|.|+++++++. +.+.-...+.|..... ....
T Consensus 159 iVDavss~g~~~id~--------~~~d~~~~ssqK~lg-P~Glg~l~~s~~~-~~~~~~~~~~~~~~~~-------~~~~ 221 (349)
T TIGR01364 159 VADMSSNILSRPIDV--------SKFGLIYAGAQKNIG-PAGLTVVIVRKDL-LGRASRITPSMLNYKI-------HAEN 221 (349)
T ss_pred EEEccccccCccCCH--------HHccEEEEecccccC-CCceEEEEECHHH-HhhcccCCCCcchHHH-------HHhc
Confidence 999998877665432 245799999999986 9999999998764 3222111112210000 0000
Q ss_pred CccCCCCC-CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CC--Cc-eEEEEEecCCCCCccc
Q 041829 347 WQIPLGRR-FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PR--IF-SLVCFRLLPPHNDEDH 420 (486)
Q Consensus 347 ~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~--~~-~~v~f~~~~~~~~~~~ 420 (486)
....++-. ....++..+++.+-.+ |++++.+++.++++++++.|++++|+.... ++ .. .+++|.+...
T Consensus 222 ~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~~l~~~l~~~~gl~~~~~~~~~rs~~v~sf~~~~~------ 295 (349)
T TIGR01364 222 DSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQLLYDTIDNSNGFYRNPVDPRNRSRMNVVFTLGNE------ 295 (349)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCeeccCCCHHHcCCeEEEEecCCh------
Confidence 01111111 2335777788888777 799999999999999999999998876553 22 23 4577876531
Q ss_pred chHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+..++.+.+.++|. ++..... ..+.+|+|+ .+++|++|||+++++|+++.+
T Consensus 296 --~~~~~~~~~~~~~Gi-~~~~~~~-~~g~vRvS~-~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 296 --ELEKRFLKEAEERGL-VSLKGHR-SVGGMRASI-YNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred --hHhHHHHHHHHHCCC-cccCCcc-ccCeeEEEC-cCCCCHHHHHHHHHHHHHHHH
Confidence 223566677778886 4443322 124899999 889999999999999998654
No 122
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.86 E-value=6.5e-19 Score=183.08 Aligned_cols=330 Identities=10% Similarity=0.051 Sum_probs=210.2
Q ss_pred HHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcC--CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 92 FLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLK--LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g--~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
.+.+.+...+.. ...|....+..++.+.+.+++.+..+ ++.+ +.++|+|+++++..++.+..+
T Consensus 166 ~~~~~~~~~~~~-~~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~-------~I~it~G~~eal~~~~~~l~~------- 230 (517)
T PRK13355 166 EVVYDMAQQLTD-TEGYSDSKGLFSARKAIMQYAQLKGLPNVDVD-------DIYTGNGVSELINLSMSALLD------- 230 (517)
T ss_pred HHHHHHHHHhhc-CCCCCCCcChHHHHHHHHHHHHhcCCCCCChh-------HEEEeCcHHHHHHHHHHHhCC-------
Confidence 333444433432 23566666788999998888866553 3332 689999999988777765433
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++...++.+..+++..|. +++.++++++++|.+|+++|++++.+. +.+|+++.|+|+||.+
T Consensus 231 ----~Gd~Vli~~P~y~~y~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~k~i~i~nP~NPTG~v 297 (517)
T PRK13355 231 ----DGDEVLIPSPDYPLWTACVNLAGG---TAVHYRCDEQSEWYPDIDDIRSKITSR------TKAIVIINPNNPTGAL 297 (517)
T ss_pred ----CCCEEEEcCCCCcCHHHHHHHCCC---EEEEeecCcccCCCCCHHHHHHhcCcC------ceEEEEECCCCCCCcC
Confidence 678899999999999999999999 999999987667999999999988654 3478889999999999
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCcee-eecccccCCC-CcceEEEEe-CchHH---
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFN-MNAHKWFLTN-FDCSALWVK-DRNTL--- 320 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~-~~~hK~l~~p-~~~g~l~~r-~~~~~--- 320 (486)
-+ +++|+++|++|++++++|++|.-+.+....+..........-.++ .++.|.++.| .-+|++++. +...+
T Consensus 298 ~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~s~~~~~~~~~vi~~~S~SK~~~~~G~RiG~~i~~~~~~~~~~~ 377 (517)
T PRK13355 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHTSIASLAPDLFCVTFSGLSKSHMIAGYRIGWMILSGNKRIAKDY 377 (517)
T ss_pred cCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcccHHHhCCCCeEEEEecchhhccCcccceEEEEeeCchhhHHHH
Confidence 76 889999999999999999999765432111111111111122333 4568987544 458988764 23211
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHH---HHHHHHHHHHHHHHHhcCCCe
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGY---IRNHIQLAKHFEGLVAQDLRF 396 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~---~~~~~~~a~~l~~~l~~~~~~ 396 (486)
...+..... .. .+ ...+..+++...+. .+.+.+. .++..+.++++.+.|+++|++
T Consensus 378 ~~~l~~~~~-~~-----------------~~---~~~~~q~a~~~aL~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~g~ 436 (517)
T PRK13355 378 IEGLNMLAN-MR-----------------LC---SNVPAQSIVQTALGGHQSVKDYLVPGGRVYEQRELVYNALNAIPGI 436 (517)
T ss_pred HHHHHHHhc-Cc-----------------CC---cChHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 111110000 00 00 12233444444442 1112222 234555678899999999898
Q ss_pred EEecCCCceEEEE-EecCCCCCcccchHHHHHHH-HHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 397 EVVTPRIFSLVCF-RLLPPHNDEDHGNKLNHKLL-DDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 397 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
++. +|..++++| ++....... .+ ...+. +.|.+.|..++.+..+. +.+++|+++ . .+++++++.++.|
T Consensus 437 ~~~-~p~g~fy~~~~l~~~~~~~--~~--~~~~~~~ll~~~gV~v~pg~~F~~~~~~~~Ris~-~--~~~~~l~~a~~rl 508 (517)
T PRK13355 437 SAV-KPKAAFYIFPKIDVKKFNI--HD--DEQFALDLLHDKKVLIVQGTGFNWDKPDHFRVVY-L--PRLEDLEDAMDRL 508 (517)
T ss_pred ccC-CCCeeeEEEeecCcccCCC--CC--HHHHHHHHHHhCCEEEeCcchhCCCCcCEEEEEe-C--CCHHHHHHHHHHH
Confidence 865 667777766 543211000 01 12333 44556675554444443 467999999 3 5889999999999
Q ss_pred HHHHHH
Q 041829 473 QDKASA 478 (486)
Q Consensus 473 ~~~~~~ 478 (486)
.++++.
T Consensus 509 ~~~~~~ 514 (517)
T PRK13355 509 ADFFSY 514 (517)
T ss_pred HHHHHH
Confidence 887754
No 123
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.86 E-value=1.2e-18 Score=175.59 Aligned_cols=316 Identities=11% Similarity=0.009 Sum_probs=211.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCC-CCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 112 PAATELEMIVLDWLAKLLKLP-EDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~-~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+..++.+.+.+|+.+.+|.+ .+ .. +.++|+|+++++..++.+..+ +++.|+++...+..+.
T Consensus 81 ~G~~~lr~aia~~~~~~~g~~~~~-----~~~~I~it~Gs~~al~~~~~~~~~-----------~gd~Vlv~~P~y~~~~ 144 (410)
T PRK06290 81 NGIQEFKEAAARYMEKVFGVKDID-----PVTEVIHSIGSKPALAMLPSCFIN-----------PGDVTLMTVPGYPVTG 144 (410)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcCC-----CcceEEEccCHHHHHHHHHHHhCC-----------CCCEEEEeCCCCccHH
Confidence 677899999999999888865 22 11 488899888887666654333 6778888999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEE
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWF 266 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~l 266 (486)
..++..|. +++.+|+++++++.+|+++|++++.+. +.+|+++.|+||||.+-+ +++|.++|++||+|+
T Consensus 145 ~~~~~~g~---~v~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NPTG~v~s~e~l~~l~~la~~~~~~i 215 (410)
T PRK06290 145 THTKYYGG---EVYNLPLLEENNFLPDLDSIPKDIKEK------AKLLYLNYPNNPTGAVATKEFYEEVVDFAKENNIIV 215 (410)
T ss_pred HHHHHcCC---EEEEEecCCCcCCcCCHHHHHHhhccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCeEE
Confidence 99999999 999999987666889999999888543 457888889999999966 678888899999999
Q ss_pred EeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 267 HVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++|.+|+.+.... ...... .+....+.+..++.|.++.| .-+|+++. ++..+. .+.....+..
T Consensus 216 I~DEaY~~~~~~~-~~~s~~~~~~~~~~~I~i~SfSK~~g~~GlRiG~ii~-~~~l~~-~l~~~~~~~~----------- 281 (410)
T PRK06290 216 VQDAAYAALTFDG-KPLSFLSVPGAKEVGVEIHSLSKAYNMTGWRLAFVVG-NELIVK-AFATVKDNND----------- 281 (410)
T ss_pred EEecchhhceeCC-CCcChhcCCCccccEEEEeechhhcCCchhheEeEEe-CHHHHH-HHHHHHhccc-----------
Confidence 9999998654311 111111 11123456777889999655 34777765 333332 2211111100
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEE-EecCCCCCcccc
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCF-RLLPPHNDEDHG 421 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f-~~~~~~~~~~~~ 421 (486)
.+ ...+...++...+- .+.+++..++..++++++.+.|++. ++.+. +|..+++.| ++++...... .
T Consensus 282 -------~~--~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~p~g~f~l~v~lp~~~~~~~-~ 349 (410)
T PRK06290 282 -------SG--QFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEV-GFKAE-MPGGTFYLYVKAPKGTKSGI-K 349 (410)
T ss_pred -------cC--CcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCCeeeEEEEECCCccccCC-C
Confidence 00 00112222222221 2345667777788899999999987 77765 455566554 5432110000 0
Q ss_pred hHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 422 NKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 422 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.....++.+.|.++|.+++.+.... ..++||+++.+..++++.++++++|++.+.++
T Consensus 350 ~~~~~~~~~~Ll~~~~v~~~p~~~~-~~~lRi~~~~~~~~~~~~~~~~~~l~~~~~~~ 406 (410)
T PRK06290 350 FENAEEFSQYLIKEKLISTVPWDDA-GHFLRFSVTFEAKDEEEEDRILEEIKRRLSDV 406 (410)
T ss_pred CCCHHHHHHHHHHhCCEEEECCccc-cCeEEEEEEcccccccchhHHHHHHHHHHhhc
Confidence 0123568888888886665443211 24899999888889999999999999887654
No 124
>PRK08960 hypothetical protein; Provisional
Probab=99.85 E-value=5e-19 Score=177.91 Aligned_cols=328 Identities=12% Similarity=0.043 Sum_probs=208.0
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+...+......|...++..++.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+...
T Consensus 47 ~~~v~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 114 (387)
T PRK08960 47 AEPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGVDVD-----PERILVTPGGSGALLLASSLLVD------- 114 (387)
T ss_pred CHHHHHHHHHHHhcCCCccCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccCcHHHHHHHHHHhcC-------
Confidence 455556666655544345666677889999999999888776432 13689999999998776654432
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..+|.+....++..|. +++.+|++.+++|.+|++.|++++++.+ .+++++.++|+||.+
T Consensus 115 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~~------~~i~i~~p~NPtG~~ 181 (387)
T PRK08960 115 ----PGKHWLLADPGYPCNRHFLRLVEG---AAQLVPVGPDSRYQLTPALVERHWNADT------VGALVASPANPTGTL 181 (387)
T ss_pred ----CCCEEEEcCCCCcchHHHHHhcCC---eEEEEecCcccCCCCCHHHHHHHhCccc------eEEEEECCCCCCCcC
Confidence 678899999999999999999999 9999999876568999999999886543 467788899999999
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCC-ceeeecccccCCC-CcceEEEEeCchHHHHHh
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEAD-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSL 324 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aD-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~ 324 (486)
-+ +++|+++|+++|+++++|.+|..+... +..... ..+. .+ .+..+++|.++.| .-+|+++..+ ..+....
T Consensus 182 ~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~-~~~~~~-~~~~-~~vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~ 257 (387)
T PRK08960 182 LSRDELAALSQALRARGGHLVVDEIYHGLTYG-VDAASV-LEVD-DDAFVLNSFSKYFGMTGWRLGWLVAPP-AAVPELE 257 (387)
T ss_pred cCHHHHHHHHHHHHHcCCEEEEEccccccccC-CCCCCh-hhcc-CCEEEEeecccccCCcccEEEEEEcCH-HHHHHHH
Confidence 66 567777899999999999999764321 111111 1121 23 4566789988644 3488887754 3232211
Q ss_pred cCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Q 041829 325 STNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIF 404 (486)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 404 (486)
.....+. . +...+....+...+.......+++..+...+..+.+.+.|+++ ++.+...|..
T Consensus 258 ~~~~~~~-----------------~-~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~~~~~l~~~L~~~-~~~~~~~p~g 318 (387)
T PRK08960 258 KLAQNLY-----------------I-SASTPAQHAALACFEPETLAILEARRAEFARRRDFLLPALREL-GFGIAVEPQG 318 (387)
T ss_pred HHHhhhc-----------------c-CCCHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHHHHHHhc-CCcCCcCCCe
Confidence 1111110 0 0001111122222322113455666667777888899999887 6665334444
Q ss_pred eEE-EEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC---CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 405 SLV-CFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS---GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 405 ~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+++ .+++.... .+ ..++.+.+.+ .| +.+.+. .+. +..++|++++ . +.+.+...++.|.++.
T Consensus 319 ~~f~~~~~~~~~-----~~--~~~~~~~ll~~~g-i~v~pg~~f~~~~~~~~iRi~~~-~--~~~~l~~al~~l~~~~ 385 (387)
T PRK08960 319 AFYLYADISAFG-----GD--AFAFCRHFLETEH-VAFTPGLDFGRHQAGQHVRFAYT-Q--SLPRLQEAVERIARGL 385 (387)
T ss_pred eEEEEEeccccC-----CC--HHHHHHHHHHhCC-EEEcCchHhCCCCCCCeEEEEec-C--CHHHHHHHHHHHHHHH
Confidence 444 34443211 11 2456666654 56 444443 332 2359999993 2 5677777777776554
No 125
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.85 E-value=3.8e-19 Score=176.24 Aligned_cols=284 Identities=13% Similarity=0.101 Sum_probs=190.8
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
.++++. +++++|.+.+ ..++++|+|+++..++.+..+ +++.|+++...|..+...++.
T Consensus 57 ~~lr~~----ia~~~~~~~~-------~i~~~~G~~~~l~~~~~~l~~-----------~gd~v~~~~p~y~~~~~~~~~ 114 (346)
T TIGR01141 57 AELKQA----LADYYGVDPE-------QILLGNGSDEIIELLIRAFLE-----------PGDAVLVPPPTYSMYEISAKI 114 (346)
T ss_pred HHHHHH----HHHHhCcChH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCCHHHHHHHHHH
Confidence 455555 8888887654 589999998887666554322 567788888888777778888
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEeeccc
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVDAAY 272 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD~A~ 272 (486)
.|+ +++.+|++.+ +.+|++.|++++.+. +.+|+++.++|+||.+-|++++.++|+.+ |+++++|++|
T Consensus 115 ~g~---~~~~~~~~~~--~~~d~~~l~~~~~~~------~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y 183 (346)
T TIGR01141 115 HGA---EVVKVPLDED--GQLDLEDILVAIDDK------PKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAY 183 (346)
T ss_pred cCC---eEEEeccCCC--CCCCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECch
Confidence 999 9999998764 589999999976432 35788889999999999999999999887 9999999999
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPL 351 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (486)
+.+... +......... .-+.+..+++|+++.| ..+|+++.+ +..+.+.......+ .
T Consensus 184 ~~~~~~-~~~~~~~~~~-~~~i~~~S~sK~~g~~G~r~G~~~~~-~~~~~~~~~~~~~~-----------------~--- 240 (346)
T TIGR01141 184 GEFSGE-PSTLPLLAEY-PNLIVLRTLSKAFGLAGLRIGYAIAN-AEIIDALNKVRAPF-----------------N--- 240 (346)
T ss_pred hhhcCC-ccHHHHHhhC-CCEEEEehhhHhhhchhhhceeeecC-HHHHHHHHhccCCC-----------------C---
Confidence 753321 1111111111 1234566789999654 347888774 33332211111000 0
Q ss_pred CCCCCcHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHH
Q 041829 352 GRRFRSLKLWMVLRLYGL-ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLD 430 (486)
Q Consensus 352 sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~ 430 (486)
...+...++.+.+.. ..+++..++..++++++++.|++++++++. ++....+++.+.. ...++.+
T Consensus 241 ---~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~~~~-~~~g~~~~~~~~~----------~~~~~~~ 306 (346)
T TIGR01141 241 ---LSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLPGLEVY-PSDANFVLIRFPR----------DADALFE 306 (346)
T ss_pred ---CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEC-CCcCCEEEEecCC----------CHHHHHH
Confidence 012222333333322 247777888889999999999998898864 4455666666542 1256777
Q ss_pred HHHccCcEEEEeee-ECC-EeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 431 DINSTGKIFISHTV-LSG-KYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 431 ~l~~~g~~~~~~~~-~~~-~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.|.+.| +.+.+.. +.+ .+++|+++ + +++|+++++++|+
T Consensus 307 ~L~~~g-I~v~~g~~f~~~~~~iRls~-~---~~~~i~~~~~~l~ 346 (346)
T TIGR01141 307 ALLEKG-IIVRDLNSYPGLPNCLRITV-G---TREENDRFLAALR 346 (346)
T ss_pred HHHHCC-eEEEeCCCcCCCCCeEEEec-C---CHHHHHHHHHHhC
Confidence 888887 4444432 212 46899998 3 7899999998873
No 126
>PRK08912 hypothetical protein; Provisional
Probab=99.85 E-value=7.9e-19 Score=176.51 Aligned_cols=316 Identities=14% Similarity=0.072 Sum_probs=204.5
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
..|....+..++.+.+.+|+.+.+|.+.+ .. +.++|+|+++++..++.+..+ +++.|+++..+
T Consensus 57 ~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~~i~~t~G~~~al~~~~~~~~~-----------~gd~Vlv~~p~ 120 (387)
T PRK08912 57 NQYPPMMGLPELRQAVAAHYARFQGLDLD-----PETEVMVTSGATEALAAALLALVE-----------PGDEVVLFQPL 120 (387)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----CcccEEEeCCcHHHHHHHHHHhcC-----------CCCEEEEeCCC
Confidence 44655566789999999999988887432 12 588999999987666554322 67789999999
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKS 261 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~ 261 (486)
|..+...++..|. +++.+|++++ ++.+|+++|++.+.+. +.+|+++.++|+||.+-+ +++|.++|++
T Consensus 121 y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~ 190 (387)
T PRK08912 121 YDAYLPLIRRAGG---VPRLVRLEPP-HWRLPRAALAAAFSPR------TKAVLLNNPLNPAGKVFPREELALLAEFCQR 190 (387)
T ss_pred chhhHHHHHHcCC---EEEEEecCcc-cCcCCHHHHHHHhCcc------ceEEEEeCCCCCcCcccCHHHHHHHHHHHHH
Confidence 9999999999999 9999998753 4789999999988543 347788899999999865 7779999999
Q ss_pred hCCEEEeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
+++++++|.+|+.+......+.... .+...-+.+..++.|.++.| .-+|+++... ............+..
T Consensus 191 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~~l~~~~~~~~~------ 263 (387)
T PRK08912 191 HDAVAICDEVWEHVVFDGRRHIPLMTLPGMRERTVKIGSAGKIFSLTGWKVGFVCAAP-PLLRVLAKAHQFLTF------ 263 (387)
T ss_pred CCeEEEEhhhhhhcccCCCCCcChhhCCCccCceEEEeechhhccCcCceeEEEecCH-HHHHHHHHHHhhccc------
Confidence 9999999999975433211111111 12223457788899998744 4488887643 322221111100000
Q ss_pred CCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce-EEEEEecCCCCC
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS-LVCFRLLPPHND 417 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~-~v~f~~~~~~~~ 417 (486)
..+.. ....+-..+. ...+.+++..++..++++++.+.|++. ++++. ++..+ .+++++.+.+.
T Consensus 264 -----------~~~~~-~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~l~~~l~~~~~- 327 (387)
T PRK08912 264 -----------TTPPN-LQAAVAYGLG-KPDDYFEGMRADLARSRDRLAAGLRRI-GFPVL-PSQGTYFLTVDLAPLGL- 327 (387)
T ss_pred -----------cCChH-HHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCCcceEEEecccccCC-
Confidence 00000 0111111121 123455677788888999999999987 78765 44444 34445543110
Q ss_pred cccchHHHHHHHHHHHc-cCcEEEEeeeEC----CEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 418 EDHGNKLNHKLLDDINS-TGKIFISHTVLS----GKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 418 ~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~----~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.....++.+.+.+ .|.....+..+. +.+++|++++. .+++++..+++|.+.++
T Consensus 328 ----~~~~~~~~~~l~~~~gV~v~pg~~f~~~~~~~~~iRl~~~~---~~~~l~~~l~rl~~~l~ 385 (387)
T PRK08912 328 ----AEDDVAFCRRLVEEAGVAAIPVSAFYEEDPVTSVVRFCFAK---RDATLDEAVERLAAARR 385 (387)
T ss_pred ----CCCHHHHHHHHHhcCCEEEecchhhCCCCCCCCEEEEEEeC---CHHHHHHHHHHHHHHHh
Confidence 0112456777654 564333333332 24699999943 47889998888877543
No 127
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.85 E-value=1.8e-18 Score=174.03 Aligned_cols=332 Identities=11% Similarity=0.107 Sum_probs=208.1
Q ss_pred HHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCcc
Q 041829 92 FLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKN 171 (486)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (486)
.+.+.+...+......|....+..++++.+.+++.+.+|.+... ..+.++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~----~~~i~it~G~~~al~~~~~~~~~--------- 113 (391)
T PRK07309 47 HVKEAAKRAIDANQSHYTGMAGLLELRQAAADFVKEKYNLDYAP----ENEILVTIGATEALSASLTAILE--------- 113 (391)
T ss_pred HHHHHHHHHHhcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhcC---------
Confidence 34444443333222335445567899999999998888863210 02589999999998777665432
Q ss_pred CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC-
Q 041829 172 SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD- 250 (486)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id- 250 (486)
+++.|++...+|..+...++..|+ +++.+|.+.+ ++.+|+++|++++++.. ..+.+|+++.++|+||.+-
T Consensus 114 --~gd~vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~---~~~~~i~l~~P~NPtG~~~s 184 (391)
T PRK07309 114 --PGDKVLLPAPAYPGYEPIVNLVGA---EIVEIDTTEN-DFVLTPEMLEKAILEQG---DKLKAVILNYPANPTGVTYS 184 (391)
T ss_pred --CCCEEEEeCCCCcchHHHHHHcCC---EEEEEecCCc-CCcCCHHHHHHHhhccC---CCeEEEEEECCCCCCCcCcC
Confidence 677788888999999999999999 9999998754 37899999999986531 1256788888999999874
Q ss_pred --ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC
Q 041829 251 --PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 251 --~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~ 327 (486)
++++|+++|++||+++++|++|+.+....+...........--.+..++.|.++.| ..+|+++.. ++.+.... ..
T Consensus 185 ~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRvG~~v~~-~~~~~~~~-~~ 262 (391)
T PRK07309 185 REQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAMTGWRIGLIFAP-AEFTAQLI-KS 262 (391)
T ss_pred HHHHHHHHHHHHHcCcEEEEEccccceeeCCCCCCCHHHhccCCEEEEecChhhccCccceeEEEEeC-HHHHHHHH-HH
Confidence 48999999999999999999998654321111111110111125567789998755 347777654 33333221 11
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS 405 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 405 (486)
..|... + ...+...++...+ +........++..+.++++.+.|++. ++++. +|..+
T Consensus 263 ~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~p~gg 320 (391)
T PRK07309 263 HQYLVT-----------------A---ATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTDL-GFKII-KPDGA 320 (391)
T ss_pred Hhhccc-----------------C---CChHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCee
Confidence 112110 0 1112222222222 22223445566677888899999887 77765 44444
Q ss_pred EE-EEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeee-E--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 406 LV-CFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTV-L--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 406 ~v-~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~-~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.+ .+++++ . ......++.+++. +.| +.+.+.. + .+..++|+++ .. +.++++..+++|.++.+++
T Consensus 321 ~~~~~~l~~-~-----~~~~~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~iRi~~-~~--~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 321 FYIFAKIPA-G-----YNQDSFKFLQDFARKKA-VAFIPGAAFGPYGEGYVRLSY-AA--SMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred EEEEEECCC-C-----CCCCHHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEe-cC--CHHHHHHHHHHHHHHHHhh
Confidence 43 334432 1 1111245666655 456 5554432 2 2346999999 33 6789999999998887654
No 128
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.85 E-value=5.9e-19 Score=167.47 Aligned_cols=360 Identities=18% Similarity=0.125 Sum_probs=243.2
Q ss_pred CCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHH-------HHHHHhcCcCccccccChhhHHHHHHHH
Q 041829 50 PESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLG-------EMLSAGLNIVGFSWITSPAATELEMIVL 122 (486)
Q Consensus 50 ~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-------~~l~~~~n~~~~~~~~~~~~~~le~~~~ 122 (486)
+.++.++++ ++.....+|. ..+.|.|--.-+...|+++- +|+++ |.+++...++|.....||.+.+
T Consensus 56 ~~sE~e~l~---~l~~ia~kN~---~~~sfiG~GyY~~~~P~vI~rnile~pewyTa-YTPYQpEISQGrLqaLfefQtl 128 (450)
T COG0403 56 PLSEYEALA---ELKEIASKNK---VFTSFIGAGYYDTYTPPVILRNILENPEWYTA-YTPYQPEISQGRLEALFEFQTL 128 (450)
T ss_pred CCCHHHHHH---HHHHHHhcCc---hhhhhccCcccCCcCcHHHHHHhhcCcccccc-CCCCchhhhhHHHHHHHHHHHH
Confidence 569999999 9999888886 45667773222222333333 45555 5566666678888999999987
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH----hCCC
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI----GGIH 198 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~----~g~g 198 (486)
+++|.|++.. +..+..++|.+-..++++-|..+ .++..++++...|+......+. +|+
T Consensus 129 --v~dLTGm~VA-------NASm~DeaTAaAEAm~ma~r~~k--------~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~- 190 (450)
T COG0403 129 --VADLTGLDVA-------NASMLDEATAAAEAMLMAKRVTK--------KKRNKFLVPKDVHPQTLDVLRTRAEGLGI- 190 (450)
T ss_pred --HHHHhCCCcc-------cchhhhhHHHHHHHHHHHHHhhc--------CcCceEEecCCCCHHHHHHHHhhcccCce-
Confidence 9999999986 68888888855544444444331 1356799999999998887765 345
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
+++.++.+ |.++|+++ ++. ..+.|++.+|++.-+.+.++.+|.+.+|++|+.++|=+=--+..++
T Consensus 191 --~i~~~~~~-------d~~~l~~~-~~~-----~~~gv~vQyP~~~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL 255 (450)
T COG0403 191 --EIEVVDAD-------DLDDLESA-DDG-----DVFGVLVQYPNTFGIVEEDLRALIEAAHSAGALVIVAADPLALGLL 255 (450)
T ss_pred --EEEEeccc-------hhhhhhhc-ccc-----CeEEEEEecCCCCCccchhHHHHHHHHhhcCCEEEEEechhHhhcc
Confidence 66666543 77788877 321 1468888888754337788999999999999988765422222222
Q ss_pred CccchhcccCCcCCCceeeeccccc----CCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC----
Q 041829 279 CPEYRQYIDGVEEADSFNMNAHKWF----LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP---- 350 (486)
Q Consensus 279 ~~~~~~~~~~~~~aDs~~~~~hK~l----~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~---- 350 (486)
-|.. .. +||++..+.+.++ ++.+.+|++.+|++- .+..|+.|.+...+..+...+. ..+|
T Consensus 256 ~pPG-e~-----GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~-----~R~mPGRlVG~S~D~~G~~A~r-LaLQTREQ 323 (450)
T COG0403 256 KPPG-EF-----GADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF-----KRQMPGRLVGVSVDAAGKRAFR-LALQTREQ 323 (450)
T ss_pred CCcc-cc-----CCceEEecCcccCCCcCCCCcceeeeeEhHhH-----hhcCCCceeeeeecCCCCchhh-hhHHHHHH
Confidence 2221 11 8999999999866 233358999988743 3456777766555544444332 1111
Q ss_pred CCCCCC------------cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCceEEEEEecCCCCC
Q 041829 351 LGRRFR------------SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTPRIFSLVCFRLLPPHND 417 (486)
Q Consensus 351 ~sr~~~------------~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~~~~~~v~f~~~~~~~~ 417 (486)
.-||.. ++.+-+.+-.+|.+|++++.++.++++.+|++.|++.. |++++.+..+..+++++..
T Consensus 324 HIRReKATSNICTnQaLlA~~As~y~~~hGp~GLk~iA~r~~~~a~~la~~L~~~~~g~~~~~~~fFdt~~v~~~~---- 399 (450)
T COG0403 324 HIRREKATSNICTNQALLALAASMYAVYHGPQGLKEIAERIHRLAAYLAAGLKEIGAGVELVFDHFFDTFTVRVPE---- 399 (450)
T ss_pred HHhhhccchhhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhcCCceEeccccceeeEEEecch----
Confidence 123321 23344445568999999999999999999999999653 6898877888888888752
Q ss_pred cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 418 EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 418 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+.+..+.++....| +-+.. +... .+-+++ ...+|++||+.+++++...
T Consensus 400 -----~~~~~l~~~~~~~G-~~L~~--~~~~-~~~ia~-tEt~t~~~i~~l~~~~~~~ 447 (450)
T COG0403 400 -----EVAEALLAAAIAGG-INLRR--VDAD-TVLIAL-TETTTKEDIDALVAAFGGV 447 (450)
T ss_pred -----hHHHHHHHHHHhcC-Cceee--ecCC-ceEEEe-ecccCHHHHHHHHHHHhhh
Confidence 34456666665555 22221 2221 566788 8999999999999998754
No 129
>PRK07777 aminotransferase; Validated
Probab=99.85 E-value=1e-18 Score=175.78 Aligned_cols=326 Identities=13% Similarity=0.076 Sum_probs=211.6
Q ss_pred HHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCC
Q 041829 95 EMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLE 174 (486)
Q Consensus 95 ~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~ 174 (486)
+.+...+......|...++..++++.+.+|+.+.+|.+... ....++|+||++++..++.+... +
T Consensus 44 ~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~----~~~i~~t~G~~~al~~~~~~~~~-----------~ 108 (387)
T PRK07777 44 EAAQEAIAGGVNQYPPGPGIPELRAAIAAQRRRRYGLEYDP----DTEVLVTVGATEAIAAAVLGLVE-----------P 108 (387)
T ss_pred HHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCcHHHHHHHHHHhcC-----------C
Confidence 33444444333456666778999999999999999875320 01488999999998776654322 5
Q ss_pred CeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCC-CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC---
Q 041829 175 KLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSS-TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD--- 250 (486)
Q Consensus 175 ~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~-~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id--- 250 (486)
++.|+++...|..+..+++..|. +++.+|.+++ ++|.+|+++|++++++. +.+|+++.++|+||.+-
T Consensus 109 gd~vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~ 179 (387)
T PRK07777 109 GDEVLLIEPYYDSYAAVIAMAGA---HRVPVPLVPDGRGFALDLDALRAAVTPR------TRALIVNSPHNPTGTVLTAA 179 (387)
T ss_pred CCEEEEeCCCchhhHHHHHHCCC---EEEEeecCCccCCCcCCHHHHHHhcCcc------cEEEEEcCCCCCCCccCCHH
Confidence 67788888899999999999999 9999999865 35789999999988643 35778888999999984
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~ 327 (486)
++++|.++|+++++++++|.+|+.+.+....+... +.+....+.+..+++|.++.| ..+|+++... ..+ +.+...
T Consensus 180 ~~~~l~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~l~-~~~~~~ 257 (387)
T PRK07777 180 ELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMRERTVTISSAAKTFNVTGWKIGWACGPA-PLI-AAVRAA 257 (387)
T ss_pred HHHHHHHHHHhcCcEEEEeccchhcccCCCCcccHhhCCCCcCcEEEEeechhhccCcCceeEEEecCH-HHH-HHHHHH
Confidence 58899999999999999999997654321111111 112223467788899999855 3478776543 222 222211
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEE
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLV 407 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v 407 (486)
..+... ..+ ......+-.++. .+...+++..++..++++++.+.|++. ++++. +|..+.+
T Consensus 258 ~~~~~~----------------~~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~-~~~g~~~ 317 (387)
T PRK07777 258 KQYLTY----------------VGG-APFQPAVAHALD-HEDAWVAALRDSLQAKRDRLAAGLAEA-GFEVH-DSAGTYF 317 (387)
T ss_pred Hhhccc----------------CCC-CHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-CCCcceE
Confidence 111100 000 001111111222 244566777788888999999999987 77765 3444444
Q ss_pred -EEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC-----CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 408 -CFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS-----GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 408 -~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~-----~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
++++.+.+. . ...++.+.|.+ .| +.+.+. .+. +..++|+++ + .+++++++.++.|.++.
T Consensus 318 ~~~~~~~~~~----~--~~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~~~~~Ri~~-~--~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 318 LCADPRPLGY----D--DGTEFCRALPERVG-VAAIPMSVFYDPADAWNHLVRFAF-C--KRDDTLDEAIRRLRALR 384 (387)
T ss_pred EEecccccCC----C--CHHHHHHHHHHhCC-EEEeCchHhCCCCcCCCCeEEEEe-c--CCHHHHHHHHHHHHHHh
Confidence 345432110 1 12567777764 45 555443 221 245899999 3 36899999999887754
No 130
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.85 E-value=2.1e-18 Score=174.35 Aligned_cols=346 Identities=8% Similarity=0.029 Sum_probs=216.1
Q ss_pred HHHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
++..+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+
T Consensus 50 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~~l~~----- 119 (409)
T PLN00143 50 TTNIAEDAIVEAVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLS-----PDDVYLTLGCKHAAEIIIKVLAR----- 119 (409)
T ss_pred CCHHHHHHHHHHHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HhhEEEecChHHHHHHHHHHHcC-----
Confidence 3444555555545433 234655667888999999999888776432 12688999999988877765443
Q ss_pred hCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc
Q 041829 168 VGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST 247 (486)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG 247 (486)
+++.|+++..++..+...++..|+ +++.+++++++++.+|+++|++++++. +..++++.++||||
T Consensus 120 ------~gd~v~v~~P~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~~~~~nP~NPTG 184 (409)
T PLN00143 120 ------PEANILLPRPGFPDVETYAIFHHL---EIRHFDLLPEKGWEVDLDAVEAIADEN------TIAMVIINPGNPCG 184 (409)
T ss_pred ------CCCEEEEcCCCCcCHHHHHHHcCC---EEEEEeccCCCCCcCCHHHHHHhcccC------CEEEEEECCCCCCC
Confidence 677889999999999999999999 999999864445889999999887543 34677888999999
Q ss_pred ccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC-C-ceeeecccccCCC-CcceEEEEeCchHHH
Q 041829 248 AVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA-D-SFNMNAHKWFLTN-FDCSALWVKDRNTLI 321 (486)
Q Consensus 248 ~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a-D-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~ 321 (486)
.+-+ +++|+++|+++++++++|.+|..+..-...+.. +..+... . .++.++.|.++.| .-+|+++..++..+.
T Consensus 185 ~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~-~~~~~~~~~vi~~~SfSK~f~~pGlRvG~~v~~~p~~~~ 263 (409)
T PLN00143 185 SVYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVP-MGLFASIVPVITLGSISKRWMIPGWGLGWLVTCDPSGLL 263 (409)
T ss_pred CccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcc-hhhhcccCcEEEEccchhhcCCCccceEEEEeeCchhhh
Confidence 9966 778888999999999999999865432111111 1111111 1 4556789995544 568998875432221
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
+....... +.... . ...++ ..+...++...+ +.+.+++..++..+..+++.+.|+++++...
T Consensus 264 ~~~~~~~~-~~~~~-------~----~~~~~---~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~~ 328 (409)
T PLN00143 264 QICEIADS-IKKAL-------N----PAPFP---PTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIPCIMC 328 (409)
T ss_pred hhHHHHHH-HHHHH-------h----ccCCC---CchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 11000000 00000 0 00001 112222222222 2456778888888888889999988765433
Q ss_pred ecCCCce-EEEEEecCCCCCcccchHHHHHHHHHH-HccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 399 VTPRIFS-LVCFRLLPPHNDEDHGNKLNHKLLDDI-NSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 399 ~~~~~~~-~v~f~~~~~~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
..+|..+ .+.+++...... ... ...++...+ .+.|..+..+..+...+++|+++ . ++++++++.+++|.++.
T Consensus 329 ~~~p~gg~f~w~~l~~~~~~--~~~-~~~~~~~~ll~~~gV~v~pg~~f~~~~~iRi~~-~--~~~~~l~~al~rl~~~l 402 (409)
T PLN00143 329 PQKAEGAFFALVKLNLLLLE--DIE-DDMEFCLKLAKEESLIILPGVTVGLKNWLRITF-A--VEQSSLEDGLGRLKSFC 402 (409)
T ss_pred CCCCCeeEEEEEecchhhcC--CCC-CHHHHHHHHHHhCCEEEeCccccCCCCeEEEEE-c--CCHHHHHHHHHHHHHHH
Confidence 3445444 444555321000 000 123444444 45665444444455567999999 3 36899999999999887
Q ss_pred HHHHH
Q 041829 477 SALLA 481 (486)
Q Consensus 477 ~~l~~ 481 (486)
++..+
T Consensus 403 ~~~~~ 407 (409)
T PLN00143 403 GRHAK 407 (409)
T ss_pred HHhcc
Confidence 65543
No 131
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.85 E-value=6.6e-19 Score=176.53 Aligned_cols=323 Identities=15% Similarity=0.143 Sum_probs=202.3
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
+..++...++|++ +++++|.+. .++++|||+|+..++.+..-. +++.|+++..+|.+
T Consensus 25 ~~~g~~~~~le~~----la~~~g~~~---------~v~~~sgt~al~~~l~al~~~----------~Gd~Viv~~~~~~~ 81 (380)
T TIGR03588 25 LTQGPTVPAFEEA----LAEYVGAKY---------AVAFNSATSALHIACLALGVG----------PGDRVWTTPITFVA 81 (380)
T ss_pred ccCChhHHHHHHH----HHHHHCCCe---------EEEEcCHHHHHHHHHHHcCCC----------CCCEEEeCCcchHH
Confidence 3457777888888 788888754 567778999988877654211 67789999999999
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
...++...|+ +++.++++++ ++.+|+++|++++++.. ..++.+|+++ +++|...|+++|+++|+++|++++
T Consensus 82 ~~~~~~~~G~---~~~~~~~~~~-~~~~d~~~l~~~i~~~~--~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI 152 (380)
T TIGR03588 82 TANCALYCGA---KVDFVDIDPD-TGNIDEDALEKKLAAAK--GKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKII 152 (380)
T ss_pred HHHHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHhhccc--CCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEE
Confidence 9999999999 9999999764 47899999999997321 1123456554 357999999999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeeecc--cccCCCCcceEEEEeCchHHHHHhcCCc-ccccccccc---cCCc
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMNAH--KWFLTNFDCSALWVKDRNTLIQSLSTNP-EFLKNKASQ---ANMV 341 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~h--K~l~~p~~~g~l~~r~~~~~~~~~~~~~-~yl~~~~~~---~~~~ 341 (486)
+|+||+.+..+-. +.. ......|..++++| |++..+ ..|++++.++....+...... +........ ....
T Consensus 153 ~D~a~a~g~~~~~--~~~-g~~~~~d~~~~S~~~~K~~~~~-~GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 228 (380)
T TIGR03588 153 EDASHALGAEYGG--KPV-GNCRYADATVFSFHPVKIITTA-EGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGP 228 (380)
T ss_pred EECCCcccCccCC--EeC-CCccccceEEEecCCCCccccc-CceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCc
Confidence 9999986543211 111 00124599999988 899776 466777777654432211100 000000000 0000
Q ss_pred cCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC-----ceEEEEEecCCCC
Q 041829 342 VDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI-----FSLVCFRLLPPHN 416 (486)
Q Consensus 342 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~-----~~~v~f~~~~~~~ 416 (486)
..+....+...-+...+.+...+. ..+.+.++.++..++++++.+.|+.+|++++..++. .....+.+....
T Consensus 229 ~~~~~~~~g~n~~m~~l~aa~g~~--qL~~l~~~~~~r~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~- 305 (380)
T TIGR03588 229 WYYEQQELGFNYRMTDIQAALGLS--QLKKLDRFVAKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLDQEF- 305 (380)
T ss_pred ceeeeeccccccCccHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhcCCCCccCCCCCCCCEeEEEEEEEEECCcC-
Confidence 000000011111222233222222 245578899999999999999999998877554321 123333443210
Q ss_pred CcccchHHHHHHHHHHHccCcEEE---Eeee----E----C----------CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 417 DEDHGNKLNHKLLDDINSTGKIFI---SHTV----L----S----------GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 417 ~~~~~~~~~~~l~~~l~~~g~~~~---~~~~----~----~----------~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.....++.+.|.++|+..- .+.. + . ....+++.+ ++..|++|+++++++|+++
T Consensus 306 -----~~~r~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~dv~~i~~~l~~~ 379 (380)
T TIGR03588 306 -----GCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPL-HPALTLEQQQRVVETLRKV 379 (380)
T ss_pred -----CCCHHHHHHHHHHCCCCcccCCcccccChhhhccCCcCCCcHHHHHHhceEEcCC-CCCCCHHHHHHHHHHHHHh
Confidence 0123567777777764211 1100 0 0 015688877 8889999999999999875
No 132
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.85 E-value=1.8e-18 Score=173.83 Aligned_cols=332 Identities=14% Similarity=0.102 Sum_probs=213.9
Q ss_pred HHHHHHHHHHhcCc-CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+..++.. ....|....+..++.+.+.+++++.+|.+... ....++|+|+++++..++.+...
T Consensus 42 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~------ 111 (389)
T PRK05957 42 PPEAIEALNNFLANPENHKYQAVQGIPPLLEAITQKLQQDNGIELNN----EQAIVVTAGSNMAFMNAILAITD------ 111 (389)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCeEEEeCChHHHHHHHHHHhcC------
Confidence 34455555554432 22356556677889999999999999974210 01578899988887766654432
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++...+......++..|+ +++.+|.+. ++.+|+++|++++++. +.+|+++.++|+||.
T Consensus 112 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~--~~~~d~~~l~~~i~~~------~klv~~~~p~NPtG~ 175 (389)
T PRK05957 112 -----PGDEIILNTPYYFNHEMAITMAGC---QPILVPTDD--NYQLQPEAIEQAITPK------TRAIVTISPNNPTGV 175 (389)
T ss_pred -----CCCEEEEeCCCCcCHHHHHHhcCC---EEEEeecCC--CCCcCHHHHHHhcCcC------ceEEEEeCCCCCCCc
Confidence 677888888888888778888899 999999864 4689999999988653 357888899999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhccc--CCcCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYID--GVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~--~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
+-| +++|+++|+++|+++++|++|+.+............ ....-..++.+..|.++.| .-+|+++..+ +.+.
T Consensus 176 ~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~~~-~~~~- 253 (389)
T PRK05957 176 VYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPI-HLLE- 253 (389)
T ss_pred CcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccChhhCCCccCcEEEEecchhhccCccceeEEEecCH-HHHH-
Confidence 977 889999999999999999999865432111101110 1111124455678988644 3488887643 3222
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
.+.....+.. .+ ...+...++...+ +.+.+++..++..++++.+.+.|++++++..+.
T Consensus 254 ~~~~~~~~~~------------------~~--~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ 313 (389)
T PRK05957 254 AIKKIQDTIL------------------IC--PPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLGQLQDRCTLH 313 (389)
T ss_pred HHHHHHhhcc------------------cC--CCcHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhcCCCcccc
Confidence 2211111100 00 0112333333333 344567777888889999999999887753344
Q ss_pred CCCceEEE-EEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 401 PRIFSLVC-FRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 401 ~~~~~~v~-f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+|..++++ +++.+ + .+ ..++.+++.+ .| +.+.++ .+ .+.+++|+++.. .+++++++.++.|.+.
T Consensus 314 ~~~gg~~~~~~~~~-~-----~~--~~~~~~~l~~~~g-v~v~pg~~f~~~~~~~iRis~~~--~~~~~l~~~~~~l~~~ 382 (389)
T PRK05957 314 PANGAFYCFLKVNT-D-----LN--DFELVKQLIREYR-VAVIPGTTFGMKNGCYLRIAYGA--LQKATAKEGIERLVQG 382 (389)
T ss_pred CCCeeEEEEEeCCC-C-----CC--hHHHHHHHHHHCC-EEEccchhhCCCCCCEEEEEEec--CCHHHHHHHHHHHHHH
Confidence 56655544 44432 1 11 2567777764 56 445443 33 224589999943 3688899999988887
Q ss_pred HHHHH
Q 041829 476 ASALL 480 (486)
Q Consensus 476 ~~~l~ 480 (486)
++++.
T Consensus 383 ~~~~~ 387 (389)
T PRK05957 383 LKTIV 387 (389)
T ss_pred HHhhh
Confidence 76653
No 133
>PRK09082 methionine aminotransferase; Validated
Probab=99.85 E-value=4.3e-19 Score=178.23 Aligned_cols=324 Identities=12% Similarity=0.071 Sum_probs=212.5
Q ss_pred HHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCcc
Q 041829 92 FLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKN 171 (486)
Q Consensus 92 ~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (486)
.+.+.+...+......|....+..++++++.+++.+++|.+... ....++|+|+++++..++.+...
T Consensus 47 ~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~----~~~i~~t~G~~~al~~~~~~~~~--------- 113 (386)
T PRK09082 47 YLVEALAYAMAAGHNQYPPMTGVAALREAIAAKTARLYGRQYDA----DSEITVTAGATEALFAAILALVR--------- 113 (386)
T ss_pred HHHHHHHHHHHcCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCCHHHHHHHHHHHHcC---------
Confidence 34455555444333456666778899999999999999875320 01488999999998887765433
Q ss_pred CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc--
Q 041829 172 SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV-- 249 (486)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i-- 249 (486)
+++.|+++...|.++..+++..|. +++.+|++.+ ++.+|++++++++++. +.+|+++.++|+||.+
T Consensus 114 --~gd~Vli~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~ 181 (386)
T PRK09082 114 --PGDEVIVFDPSYDSYAPAIELAGG---RAVRVALQPP-DFRVDWQRFAAAISPR------TRLIILNTPHNPSGTVWS 181 (386)
T ss_pred --CCCEEEEeCCCchhhHHHHHHcCC---EEEEEecCcc-cccCCHHHHHHhcCcc------ceEEEEeCCCCCCCcCCC
Confidence 677899999999999999999999 9999999754 4899999999988643 4577888899999987
Q ss_pred -CChHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhc
Q 041829 250 -DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLS 325 (486)
Q Consensus 250 -d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~ 325 (486)
+++++|.++|+++|+++++|.+|+.+........... .+...-..+..++.|.++.| .-+|+++.. ++.+. .+.
T Consensus 182 ~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~iv~~-~~l~~-~~~ 259 (386)
T PRK09082 182 AADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAP-AALSA-EFR 259 (386)
T ss_pred HHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCCCChhhCcCccCcEEEEeechhhccchhhhhhhhhCC-HHHHH-HHH
Confidence 7789999999999999999999976543211111111 11122235566789998655 347887764 33322 221
Q ss_pred CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 041829 326 TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI 403 (486)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 403 (486)
....+.. .....+..+++...+ ..+.++++.+...++.+++.+.|++. ++++. ++.
T Consensus 260 ~~~~~~~--------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~ 317 (386)
T PRK09082 260 KVHQYNT--------------------FTVNTPAQLALADYLRAEPEHYLELPAFYQAKRDRFRAALANS-RFKLL-PCE 317 (386)
T ss_pred HHHhhhc--------------------CCCChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHhC-CCccc-CCC
Confidence 1111100 001112222222222 34556777777888899999999885 77764 455
Q ss_pred ceEEE-EEecC-CCCCcccchHHHHHHHHHHHccCcEEEEeee-EC----CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 404 FSLVC-FRLLP-PHNDEDHGNKLNHKLLDDINSTGKIFISHTV-LS----GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 404 ~~~v~-f~~~~-~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~----~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
.+++. ++++. .+ .+ ..++.+.|.++.++.+.+.. +. +.+++|+++ +. +++++++.+++|++
T Consensus 318 g~~~~~~~~~~~~~-----~~--~~~~~~~l~~~~~v~v~pg~~f~~~~~~~~~~Ri~~-~~--~~~~l~~~~~rl~~ 385 (386)
T PRK09082 318 GTYFQLVDYSAISD-----LD--DVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRLCF-AK--QEETLDAAAERLCQ 385 (386)
T ss_pred eeEEEEEeccccCC-----CC--HHHHHHHHHHhCCEEEeCcHHhCCCCCCCCEEEEEe-cC--CHHHHHHHHHHHhh
Confidence 55544 45531 11 11 24566666544335555543 32 246899999 33 68889999988865
No 134
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.85 E-value=4.3e-19 Score=176.19 Aligned_cols=289 Identities=15% Similarity=0.185 Sum_probs=197.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++.|.+ .+++++||++++..++.+... +++.|+++...|.+..
T Consensus 51 ~npt~~~Le~~----lA~leg~e---------~ivvt~gg~~Ai~~~l~all~-----------~Gd~Il~~~~~y~~~~ 106 (388)
T PRK08861 51 GNPNRGLLEQT----LSELESGK---------GAVVTNCGTSALNLWVSALLG-----------PDDLIVAPHDCYGGTY 106 (388)
T ss_pred CCchHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCchHHHH
Confidence 56778888888 89999853 389999999998887765432 6778888888887655
Q ss_pred HHHH----HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KACQ----IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~----~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+. ..|+ +++.++ ..|+++++++++++ +.+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 107 ~~~~~~~~~~gi---~v~~vd-------~~d~e~l~~~i~~~------tklV~lesP~NPtG~v~dl~~I~~la~~~gi~ 170 (388)
T PRK08861 107 RLFNTRANKGDF---KVQFVD-------QSDAAALDAALAKK------PKLILLETPSNPLVRVVDIAELCQKAKAVGAL 170 (388)
T ss_pred HHHHHHHhcCCe---EEEEEC-------CCCHHHHHHhcCcC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 4332 2345 666554 34889999888653 45899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||.+|+.+....| .. -++|.++.+.|||+++|.+ .|+++.++++...+. . ++.
T Consensus 171 vIvDea~~~~~~~~p-l~------~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~-~----~~~----------- 227 (388)
T PRK08861 171 VAVDNTFLTPVLQKP-LE------LGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEEL-A----WWG----------- 227 (388)
T ss_pred EEEECCccccccCCC-cc------cCCCEEEeecceeccCCCcceeEEEEecHHHHHHHH-H----HHH-----------
Confidence 999999986543322 11 1799999999999999865 576666665432221 1 010
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
...|.....+..|..++ |.+-+.-+++++.++|..+.++|+++|.++-+.-| ..++
T Consensus 228 -----~~~G~~~~p~~a~l~~r--gl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~ 300 (388)
T PRK08861 228 -----NCIGATGTPFDSYMTLR--GIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSM 300 (388)
T ss_pred -----hccCCCCChHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCce
Confidence 01222334556776665 67888899999999999999999999998644311 2358
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEee-----eE-------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHT-----VL-------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.. + .+...++.+.|.-- |. ....+. .. .| .+.+|+|+ --|
T Consensus 301 ~sf~~~~-~------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsv-----GlE 368 (388)
T PRK08861 301 LSFEFAG-S------FEQLKVFVKALALFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSV-----GLE 368 (388)
T ss_pred EEEEeCC-C------HHHHHHHHhcCCcceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEe-----CcC
Confidence 8898863 1 22234555554321 11 011111 00 11 25799999 335
Q ss_pred HHHHHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKASALL 480 (486)
Q Consensus 464 di~~~~~~l~~~~~~l~ 480 (486)
|++.+++.|++..+.+.
T Consensus 369 ~~~dli~Dl~~al~~~~ 385 (388)
T PRK08861 369 DAQDLIADLDQAFAKAA 385 (388)
T ss_pred CHHHHHHHHHHHHHHHH
Confidence 67777777777766554
No 135
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.85 E-value=2.4e-18 Score=173.77 Aligned_cols=341 Identities=11% Similarity=0.046 Sum_probs=210.4
Q ss_pred HHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 91 GFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 91 ~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
..+.+.+...+... ...|....+..++++.+.+++....|.+.. ....++|+|+|+++..++.+..+
T Consensus 51 ~~~~~~~~~~l~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~ii~t~G~t~al~~~~~~l~~------- 118 (403)
T TIGR01265 51 PEAEEAVKDALRSGKFNGYAPSVGALAAREAVAEYLSSDLPGKLT-----ADDVVLTSGCSQAIEICIEALAN------- 118 (403)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCC-----HHHEEEecChHHHHHHHHHHhCC-------
Confidence 44445554444322 234544556667777766666554443221 12589999999998888776543
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..++..+...++..|+ +++.+++++++++.+|++++++++.+. +.+|+++.++|+||.+
T Consensus 119 ----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~ 185 (403)
T TIGR01265 119 ----PGANILVPRPGFPLYDTRAAFSGL---EVRLYDLLPEKDWEIDLDGLEALADEK------TVAIVVINPSNPCGSV 185 (403)
T ss_pred ----CCCEEEEeCCCchhHHHHHHHcCC---EEEEecCCcccCCccCHHHHHHHhCcC------ccEEEEecCCCCCCCC
Confidence 677788899999988889999999 999998865555789999999988653 2468888999999999
Q ss_pred C---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CCC-ceeeecccccCCC-CcceEEEEeCc-hHHHH
Q 041829 250 D---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EAD-SFNMNAHKWFLTN-FDCSALWVKDR-NTLIQ 322 (486)
Q Consensus 250 d---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aD-s~~~~~hK~l~~p-~~~g~l~~r~~-~~~~~ 322 (486)
- ++++|.++|+++|+++++|++|+.+....+.+.. +..+. ... .++.++.|.++.| ..+|+++..++ ..+..
T Consensus 186 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~-~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~ 264 (403)
T TIGR01265 186 FSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFIP-MASFASIVPVLSLGGISKRWVVPGWRLGWIIIHDPHGIFRD 264 (403)
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCccc-hhhhccCCcEEEEeecccccCCCcceEEEEEEeCchhhhHH
Confidence 5 4899999999999999999999865432111111 11121 112 3456789986555 56899887643 11111
Q ss_pred -HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 323 -SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 323 -~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
.......+... .. +...+....+-.++.......+++..++..+.++++.+.|+.++++++..+
T Consensus 265 ~~~~~~~~~~~~--------------~~-~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~~p 329 (403)
T TIGR01265 265 TVLQGLKNLLQR--------------IL-GPATIVQGALPDILENTPQEFFDGKISVLKSNAELCYEELKDIPGLVCPKP 329 (403)
T ss_pred HHHHHHHHHhhh--------------hc-CCChHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHhcCCCceecCC
Confidence 00000000000 00 000111112222333223455677778888888999999999888876544
Q ss_pred CCceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 402 RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 402 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.....+.++++...... . ....++...+. +.|..+..+..+...+++|+++. ..++.+++.+++|.++.++
T Consensus 330 ~~g~f~~~~~~~~~~~~--~-~~~~~~~~~l~~~~gv~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 330 EGAMYLMVKLELELFPE--I-KDDVDFCEKLVREESVICLPGSAFGLPNWVRITIT---VPESMLEEACSRIKEFCER 401 (403)
T ss_pred CceeEEEEeccccccCC--C-CCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEec---CCHHHHHHHHHHHHHHHHh
Confidence 44555555654211000 0 01245666654 45644444444444579999993 2577888888888877654
No 136
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.85 E-value=2.1e-19 Score=179.23 Aligned_cols=318 Identities=14% Similarity=0.123 Sum_probs=210.9
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
...|....+..++++.+.+|+.+-.|.+.+. ...+++++|+.+++.++..+... .+++.|+++...
T Consensus 37 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~-----~~~i~~~~G~~~~~~~~~~~~~~---------~~~~~vlv~~P~ 102 (363)
T PF00155_consen 37 FLGYPPPQGYPELREAIADFLGRRYGVPVDP-----EANILVTSGAQAALFLLLRLLKI---------NPGDTVLVPDPC 102 (363)
T ss_dssp CTSSTCTTHHHHHHHHHHHHHHHHHTHHTTG-----GEGEEEESHHHHHHHHHHHHHHS---------STTSEEEEEESS
T ss_pred cccCCCchhhHHHHHHHHHHhhhccCccccc-----ceEEEEecccccchhhhhhcccc---------cccccceecCCc
Confidence 3456666678999999888888666654431 11455555665555555443310 056789999999
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKS 261 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~ 261 (486)
|..+...++..|+ +++.+|++..+++.+|+++|++.+++...++.++.+|+++.++|+||..-+ +++|+++|++
T Consensus 103 y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~ 179 (363)
T PF00155_consen 103 YPSYIEAARLLGA---EVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELARE 179 (363)
T ss_dssp STHHHHHHHHTTS---EEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHH
T ss_pred cccccccccccCc---eeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcc
Confidence 9999999999999 999999875556899999999999986655434678888999999999855 5555556999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCc-CCC-ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVE-EAD-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aD-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
||+++++|.+|+.+....+........++ ..+ .++.++.|.++.| ...|++++ ++......-.....+...
T Consensus 180 ~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRvG~i~~-~~~~~~~l~~~~~~~~~~----- 253 (363)
T PF00155_consen 180 YNIIIIVDEAYSDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSFGLPGLRVGYIVA-PPELIERLRRFQRSGLSS----- 253 (363)
T ss_dssp TTSEEEEEETTTTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTTTSGGGTEEEEEE-EHHHHHHHHHHHHHTTSS-----
T ss_pred cccceeeeeceeccccCCCccCcccccccccccceeeeeccccccccccccccccc-hhhhhhhhhhcccccccc-----
Confidence 99999999999876654222211111111 223 6778899998766 35788888 443332211111111110
Q ss_pred CCccCCCCCccCCCCCCCcHHHHHHHHHhC--hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCC
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLWMVLRLYG--LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHN 416 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~ 416 (486)
......+...+...+ .+.++++.++..++++++.+.|++. ++.+..++ .+++++...+
T Consensus 254 ---------------~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~-~~~~~~~~-~~~~~~~~~~--- 313 (363)
T PF00155_consen 254 ---------------SPMQAAAAAALSDPELVEKWLEELRERLRENRDLLREALEEI-GITVLPPE-AGFFLWVRLD--- 313 (363)
T ss_dssp ---------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TSEEEHHS-BSSEEEEEES---
T ss_pred ---------------chhhHHHHHhhhcccccccccccchhhHHHHHHHHHHHHHHh-hhheeecc-CccEEEEEcc---
Confidence 001112222222222 1267888889999999999999998 99988655 5566554432
Q ss_pred CcccchHHHHHHHHHHHcc-CcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 417 DEDHGNKLNHKLLDDINST-GKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 417 ~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
.....++.++|.++ |....++..+....++|+++ ...+++++++++++|
T Consensus 314 -----~~~~~~l~~~L~~~~gi~v~pg~~~~~~~~iRi~~--a~~~~e~~~~~~~~l 363 (363)
T PF00155_consen 314 -----PNDAEELAQELLEEYGILVRPGSYFGVPGYIRISL--ASHSEEDLEEALERL 363 (363)
T ss_dssp -----HHHHHHHHHHHHHHHTEEEEEGGGGTSTTEEEEEG--GCSCHHHHHHHHHHH
T ss_pred -----cchHHHHHHHHHHhCCEEEEecCCCCCCCEEEEEe--ccCCHHHHHHHHhhC
Confidence 11456788888888 75444433333466999998 355999999999886
No 137
>PRK12414 putative aminotransferase; Provisional
Probab=99.85 E-value=1.3e-18 Score=174.49 Aligned_cols=326 Identities=11% Similarity=0.078 Sum_probs=206.9
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|....+..++.+.+.+|+++++|.+... ..+.++|+|+++++..++.+..+
T Consensus 45 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~----~~~i~it~g~~~al~~~~~~l~~-------- 112 (384)
T PRK12414 45 PALVEGVARAMRDGHNQYAPMAGIAALREALAEKTERLYGARYDP----ASEVTVIASASEGLYAAISALVH-------- 112 (384)
T ss_pred HHHHHHHHHHHHhCCCCcCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEECChHHHHHHHHHHhcC--------
Confidence 334444443332222445555677899999999999999985210 01489999999988776655433
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV- 249 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i- 249 (486)
+++.|+++..+|..+...++..|+ +++.+|++++ ++.+|++.|++++++. +.+|+++.++|+||.+
T Consensus 113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~-~~~~d~~~l~~~l~~~------~~~v~i~~p~NPTG~~~ 179 (384)
T PRK12414 113 ---PGDEVIYFEPSFDSYAPIVRLQGA---TPVAIKLSPE-DFRVNWDEVAAAITPR------TRMIIVNTPHNPSATVF 179 (384)
T ss_pred ---CCCEEEEeCCCccchHHHHHHcCC---EEEEEecCcc-ccccCHHHHHhhcCcc------cEEEEEcCCCCCCCcCC
Confidence 677898999999999999999999 9999998754 4789999999988643 4578888999999998
Q ss_pred --CChHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHh
Q 041829 250 --DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSL 324 (486)
Q Consensus 250 --d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~ 324 (486)
+++++|+++|+++|+++++|++|.-+.+......... .....--.++.++.|.++.| .-+|+++..+ .... .+
T Consensus 180 s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~pGlRiG~~v~~~-~l~~-~l 257 (384)
T PRK12414 180 SAADLARLAQLTRNTDIVILSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPA-ELMD-EI 257 (384)
T ss_pred CHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCccCcccCcCccCcEEEEecccccccCccceEEEEecCH-HHHH-HH
Confidence 5789999999999999999999975433211111111 11111125677789998755 4578887654 3222 22
Q ss_pred cCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 041829 325 STNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI 403 (486)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 403 (486)
.....+. ......+..+++...+.. ..+.+..+...+.++.+.+.|++. ++++. ++.
T Consensus 258 ~~~~~~~--------------------~~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~ 315 (384)
T PRK12414 258 RKVHQFM--------------------VFSADTPMQHAFAEALAEPASYLGLGAFYQRKRDLLARELAGS-RFELL-PSE 315 (384)
T ss_pred HHHHhhe--------------------ecCCCcHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhC-CCeec-CCC
Confidence 1111100 001112233333333321 234455667778888999999987 77765 555
Q ss_pred ceEEEE-EecCCCCCcccchHHHHHHH-HHHHccCcEEEEeeeEC--C--EeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 404 FSLVCF-RLLPPHNDEDHGNKLNHKLL-DDINSTGKIFISHTVLS--G--KYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 404 ~~~v~f-~~~~~~~~~~~~~~~~~~l~-~~l~~~g~~~~~~~~~~--~--~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
.+++.| ++.+.. +....++. ..+.+.|..+..+..+. + .+++|+++ +. +++++++.+++|.+
T Consensus 316 gg~~~~~~~~~~~------~~~~~~~~~~~l~~~gV~v~pg~~f~~~~~~~~~iRis~-~~--~~~~~~~~~~rl~~ 383 (384)
T PRK12414 316 GSFFMLARFRHFS------DESDSDFVLRLIRDARVATIPLSAFYTDGTDTGLIRLSF-SK--DDATLVEGARRLCS 383 (384)
T ss_pred cceEEEEcccccC------CCCHHHHHHHHHHhCCEEEecchhhcCCCCCCCEEEEEe-cC--CHHHHHHHHHHHhh
Confidence 555544 553210 00113344 34455675444443332 2 46899999 32 58889888888864
No 138
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.85 E-value=1.9e-18 Score=171.33 Aligned_cols=322 Identities=9% Similarity=0.051 Sum_probs=204.9
Q ss_pred HHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHhCcc
Q 041829 93 LGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRVGKN 171 (486)
Q Consensus 93 ~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (486)
+.+.+..... ....|....+..++++.+.+|+.+.+|.+.+ .. ..++|+|+++++..++.+..+ .
T Consensus 18 ~~~~~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~~Iiit~Gs~~ai~~~~~~~~~--------~ 83 (350)
T TIGR03537 18 IRKALIDAVP-EVSQYPSALGTKALREAISGWFERRFGVKLD-----PDAQVLPSAGSKEAIFHFPLVFID--------P 83 (350)
T ss_pred HHHHHHHHHh-ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCcEEEcCChHHHHHHHHHHHcC--------C
Confidence 4444443332 2344655556789999999999988886543 12 589999999888776654432 1
Q ss_pred CCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC
Q 041829 172 SLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP 251 (486)
Q Consensus 172 ~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~ 251 (486)
|.+++.|+++..++..+..+++.+|+ +++.+|+++++++.+|++++++++++. +.+++++.++|+||.+-|
T Consensus 84 g~~~d~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~~~i~i~~p~NPtG~~~~ 154 (350)
T TIGR03537 84 EEDRRRVIFGTPGYPVYERGALFAGG---EPTAVKLKKEDGFLLRLEKVEKSILEE------TKIVWINYPHNPTGATAP 154 (350)
T ss_pred CCCCceEEEcCCCCcchHHHHHhcCC---EEEEcccCcccCCccCHHHHHHhhhhc------cEEEEEeCCCCCcCcccC
Confidence 11236888999999999999999999 999999975445789999999998764 347788889999999877
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CCceeeecccccCCC-CcceEEEEeCchHHHHHhcC
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-ADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLST 326 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~ 326 (486)
+++|+++|+++|+++++|.+|+..... ..... ...... -..+..+++|.++.| .-.|+++ .++.........
T Consensus 155 ~~~~~~l~~~a~~~~~~ii~De~y~~~~~~-~~~~~-~~~~~~~~~i~~~s~SK~~g~~GlRiG~~~-~~~~~~~~~~~~ 231 (350)
T TIGR03537 155 RSYLKETIAMCREHGIILCSDECYTEIYFG-EPPHS-ALEVGIENVLAFHSLSKRSGMTGYRSGFVA-GDEKLISFLRKL 231 (350)
T ss_pred HHHHHHHHHHHHHcCcEEEEeccccccccC-CCCCc-hhhcCcCCEEEEeecccccCCccccceeee-cCHHHHHHHHHH
Confidence 889999999999999999999754321 11111 111111 124455789988655 3367665 344333222111
Q ss_pred CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce
Q 041829 327 NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS 405 (486)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 405 (486)
...+. .+. ..+...++...+ ..+.+++..++..++.+.+.+.|++. ++++. +|..+
T Consensus 232 ~~~~~-------------------~~~--~~~~q~~~~~~l~~~~~~~~~r~~l~~~~~~~~~~l~~~-g~~~~-~~~g~ 288 (350)
T TIGR03537 232 RANFG-------------------VAS--PDFVQAAAKAAWSDDNHVLERRKIFKRKRDLFIEFFNKV-GLEYL-YPDAT 288 (350)
T ss_pred HHhhc-------------------cCC--CHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCCeE
Confidence 11110 000 011111111222 23445666777778888899999887 77765 45545
Q ss_pred E-EEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 406 L-VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 406 ~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
. +.+++.. . .+ ..++.+.|.++|.....+..+. +..++|+++ . .++++++++++.|++
T Consensus 289 ~~~~~~~~~-~-----~~--~~~l~~~L~~~gv~v~~g~~f~~~~~~~~Ri~~-~--~~~~~~~~~l~~~~~ 349 (350)
T TIGR03537 289 FYLWVKVPS-G-----ID--AKDYALRLLENGIVVAPGENFGSGEEGYVRVAL-V--PTLEECEEALRLWER 349 (350)
T ss_pred EEEEEECCC-C-----CC--HHHHHHHHHHCCEEEcCchhhCCCCCCEEEEEe-c--CCHHHHHHHHHHHhc
Confidence 4 3445432 1 11 2567788888874443433332 246899998 3 478899998888764
No 139
>PRK07550 hypothetical protein; Provisional
Probab=99.85 E-value=3e-18 Score=172.24 Aligned_cols=328 Identities=12% Similarity=0.055 Sum_probs=209.1
Q ss_pred HHHHHHHHHHhc-CcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGL-NIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~-n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+ +.....|...++..++++.+.+++.+..|.+.. ....++|+|+++++..++.+...
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 112 (386)
T PRK07550 44 PPELLRALAEAAADPAAHLYGPVEGLPELREAYAAHYSRLYGAAIS-----PEQVHITSGCNQAFWAAMVTLAG------ 112 (386)
T ss_pred CHHHHHHHHHHHhCcCCcCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHhcC------
Confidence 444555555443 222334555567899999999999998886432 12588899888887766655432
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++...+..+...++..|+ +++.+|.++++++.+|+++|++++++. +.+|+++.++|+||.
T Consensus 113 -----~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~~~~P~NPtG~ 178 (386)
T PRK07550 113 -----AGDEVILPLPWYFNHKMWLDMLGI---RPVYLPCDEGPGLLPDPAAAEALITPR------TRAIALVTPNNPTGV 178 (386)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEecCCCcCCCCCHHHHHHHhccc------CcEEEEeCCCCCCCc
Confidence 677899999999888888899999 999999986445789999999998753 346677789999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CC-CceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EA-DSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~a-Ds~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
+-+ +++|+++|+++|+++++|.+|+.+..........+.... .. ..+..++.|.++.| ..+|+++..+ +.+..
T Consensus 179 ~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~G~RiG~i~~~~-~~~~~ 257 (386)
T PRK07550 179 VYPPELLHELYDLARRHGIALILDETYRDFDSGGGAPHDLFADPDWDDTLVHLYSFSKSYALTGHRVGAVVASP-ARIAE 257 (386)
T ss_pred ccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCCCcchhhCCCccccEEEEecchhhccCcccceEeeecCH-HHHHH
Confidence 865 789999999999999999999765321111111111111 11 23467889998744 4578877653 32222
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC--hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG--LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
... +.... +. + ...+..+++...+. .+..++..++..++++.+.+.|++++++.+.
T Consensus 258 ~~~----~~~~~-------------~~-~---~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~- 315 (386)
T PRK07550 258 IEK----FMDTV-------------AI-C---APRIGQIAVAWGLPNLADWRAGNRAEIARRRDAFRAVFARLPGWELL- 315 (386)
T ss_pred HHH----HHhhc-------------cc-C---CCcHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHhCCCceeC-
Confidence 111 11000 00 0 11223333333322 2344556667778888999999887677543
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
++....+++++...+ . ...++.++|.+ .| +.+.+. .+. +..++|++++. .++++++++++.|.+.
T Consensus 316 ~~g~~~~~~~~~~~~-----~--~~~~l~~~l~~~~g-v~v~pg~~f~~~~~~~iRis~~~--~~~~~~~~~~~~l~~~ 384 (386)
T PRK07550 316 ASGAYFAYVRHPFPD-----R--PSREVARRLAKEAG-ILCLPGTMFGPGQEGYLRLAFAN--ADVAGIGELVERLRAF 384 (386)
T ss_pred CCceEEEEecCCCCC-----C--CHHHHHHHHHHhcC-EEEeCchhhCCCCCCEEEEEeec--CCHHHHHHHHHHHHhh
Confidence 333334444543211 1 12567777654 56 555443 332 34699999943 4689999999999775
No 140
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.6e-18 Score=174.99 Aligned_cols=338 Identities=11% Similarity=0.053 Sum_probs=211.8
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|....+..++.+.+.+++++.+|.+.. ..+.++|+|+++|+..++.+..+
T Consensus 49 ~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~-----~~~i~~t~G~~~al~~~~~~~~~-------- 115 (402)
T PRK06107 49 DHIKQAAVAAIERGETKYTLVNGTPALRKAIIAKLERRNGLHYA-----DNEITVGGGAKQAIFLALMATLE-------- 115 (402)
T ss_pred HHHHHHHHHHHHcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEeCCHHHHHHHHHHHhcC--------
Confidence 33555555555433344655557789999999999999887432 12589999999988777654322
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++...+.....++...|. .++.++++.+++|.+|+++|++++++. +.+|+++.++|+||.+-
T Consensus 116 ---~gd~vl~~~p~y~~y~~~~~~~~~---~~~~v~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 183 (402)
T PRK06107 116 ---AGDEVIIPAPYWVSYPDMVLANDG---TPVIVACPEEQGFKLTPEALEAAITPR------TRWLILNAPSNPTGAVY 183 (402)
T ss_pred ---CCCEEEEecCCCcCHHHHHHHcCC---EEEEecCCcccCCCCCHHHHHhhcCcC------ceEEEEECCCCCCCcCc
Confidence 677888898888777777887887 788888865445789999999988542 45778888999999886
Q ss_pred C---hHHHHHHHHHh-CCEEEeeccccchhccCccchhcc---cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 251 P---LLALGNIAKSN-GMWFHVDAAYAGSACICPEYRQYI---DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 251 ~---l~~I~~ia~~~-g~~lhvD~A~g~~~~~~~~~~~~~---~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
+ +++|+++|+++ |+++++|.+|+...+..+...... .+...--.+..+++|.++.| .-+|+++.. +... +
T Consensus 184 s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~~~~-~~~~-~ 261 (402)
T PRK06107 184 SRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEPTPHLLAAAPELRDRVLVTNGVSKTYAMTGWRIGYAAGP-ADLI-A 261 (402)
T ss_pred CHHHHHHHHHHHHHcCCeEEEEehhccccccCCCCCCCHHHhCcCccCCEEEEeccchhhcCcccceeeeecC-HHHH-H
Confidence 5 67788889998 999999999975432211111111 11111123345569999745 347887654 3322 2
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
.+.....+. +.....+..+++.+.+ +...+++..++..++.+.+.+.|++++++.+.
T Consensus 262 ~~~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~- 320 (402)
T PRK06107 262 AINKLQSQS--------------------SSCPSSISQAAAAAALNGDQSFVTESVAVYKQRRDYALALLNAIPGLSCL- 320 (402)
T ss_pred HHHHHHHhc--------------------ccCCChHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-
Confidence 222111110 0011222333333333 44556777778888889999999988787765
Q ss_pred CCCceEEEE-EecCC-C--CCcccchHHHHHHHHHHH-ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 401 PRIFSLVCF-RLLPP-H--NDEDHGNKLNHKLLDDIN-STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 401 ~~~~~~v~f-~~~~~-~--~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+|..+++.| ++... + ...........++...+. +.|..+.++..+...+++|++++ .+++++++.++.|.++
T Consensus 321 ~p~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~Fg~~~~iRis~~---~~~e~l~~~l~~l~~~ 397 (402)
T PRK06107 321 VPDGAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDSAGVAVVQGTAYGLSPYFRLSIA---TSLETLEEACARIERA 397 (402)
T ss_pred CCCcceEEeeecccccccccccccCCCCHHHHHHHHHHhCCEEEeCccccCCCCeEEEEeC---CCHHHHHHHHHHHHHH
Confidence 455555443 33210 0 000000001234555554 45654444444544569999994 3689999999999887
Q ss_pred HHHH
Q 041829 476 ASAL 479 (486)
Q Consensus 476 ~~~l 479 (486)
++++
T Consensus 398 l~~~ 401 (402)
T PRK06107 398 VAAL 401 (402)
T ss_pred HHhc
Confidence 7654
No 141
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=99.84 E-value=1e-18 Score=174.69 Aligned_cols=288 Identities=17% Similarity=0.184 Sum_probs=194.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-- 187 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (486)
..|...+||+. +++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+
T Consensus 57 ~~p~~~~le~~----lA~l~g~~~---------av~~~sG~~Ai~~~l~al~~-----------~Gd~Vi~~~~~y~~t~ 112 (391)
T TIGR01328 57 GNPTVSNLEGR----IAFLEGTEA---------AVATSSGMGAIAATLLTILK-----------AGDHLISDECLYGCTF 112 (391)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCcchHHH
Confidence 56777888888 999999764 68899999888777655432 67778888887754
Q ss_pred --HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 188 --LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 188 --~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+...+...|+ +++.++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 113 ~~~~~~~~~~G~---~~~~vd~~-------d~e~l~~~i~~~------tklV~le~p~Np~G~v~dl~~I~~la~~~gi~ 176 (391)
T TIGR01328 113 ALLEHALTKFGI---QVDFINMA-------IPEEVKAHIKDN------TKIVYFETPANPTMKLIDMERVCRDAHSQGVK 176 (391)
T ss_pred HHHHHHHhcCCe---EEEEECCC-------CHHHHHHhhccC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3345556777 77777653 788999888654 35888999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||+||+.+....+ . -.++|.++.+++|+++++.. .|++ +.+++.+.+.......++
T Consensus 177 livD~a~a~~~~~~~-~------~~g~Divv~S~sK~lgg~g~~~gG~v-~~~~~li~~l~~~~~~~~------------ 236 (391)
T TIGR01328 177 VIVDNTFATPMLTNP-V------ALGVDVVVHSATKYIGGHGDVVAGLI-CGKAELLQQIRMVGIKDM------------ 236 (391)
T ss_pred EEEECCCchhccCCc-h------hcCCCEEEccccccccCCCCceEEEE-EcCHHHHHHHHHHHHHhC------------
Confidence 999999976443211 1 12799999999999998765 3554 555543332211110000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
.|.......+|.+++ |.+.+..++++..++++++.+.|+++|+++.+.-| ..++
T Consensus 237 -------~g~~l~~~~a~l~l~--~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~ 307 (391)
T TIGR01328 237 -------TGSVISPFDAWLILR--GLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGM 307 (391)
T ss_pred -------CCCCCCcHHHHHHHh--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCce
Confidence 122234556677765 45677788999999999999999999998654322 1348
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------CcE---EEEeee-----E-------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GKI---FISHTV-----L-------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~~~~-----~-------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.+ + .+...++.+.|.-- |.. ...+.. + .| .+.+|+|+ --|
T Consensus 308 ~s~~~~~-~------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~sv-----GlE 375 (391)
T TIGR01328 308 ITFELKG-G------FAGAKKLLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSV-----GLE 375 (391)
T ss_pred EEEEeCC-C------HHHHHHHHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEe-----CcC
Confidence 8998863 1 22234566654321 100 000100 0 01 35799999 345
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKASA 478 (486)
Q Consensus 464 di~~~~~~l~~~~~~ 478 (486)
|++.+++.|++..+.
T Consensus 376 ~~~dl~~dl~~al~~ 390 (391)
T TIGR01328 376 DADDLIADLKQALDA 390 (391)
T ss_pred CHHHHHHHHHHHHhh
Confidence 788888888777653
No 142
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.84 E-value=4.9e-18 Score=170.56 Aligned_cols=327 Identities=11% Similarity=0.065 Sum_probs=205.8
Q ss_pred HHHHHHHHHHhcC-cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLN-IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+. .....|....+..++.+.+.+|+.+.+|.+... ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~vi~t~G~~~~l~~~~~~~~~------ 113 (383)
T TIGR03540 44 PKHIVEALCKAAENPENHRYPSYEGMLAYRQAVADWYKRRFGVELDP----ETEVLSLIGSKEGIAHIPLAFVN------ 113 (383)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCC----CCeEEECCCcHHHHHHHHHHhCC------
Confidence 3444555544433 223445555567889999999999888875320 01367788888887776654332
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..++..+..+++.+|. +++.+|++.++++.+|+++|++++.+. +.+|+++.++|+||.
T Consensus 114 -----~gd~vlv~~P~y~~~~~~~~~~G~---~v~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~i~~P~NPtG~ 179 (383)
T TIGR03540 114 -----PGDIVLVPDPGYPVYRIGTLFAGG---EPYEMPLKEENGFLPDFDAIPEDIAKK------AKLMFINYPNNPTGA 179 (383)
T ss_pred -----CCCEEEEeCCCCcchHHHHHhcCC---EEEEEecCcccCCccCHHHHHhhcccc------ceEEEEeCCCCCcCc
Confidence 678899999999999999999999 999999986545789999999988543 457888889999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
+-+ +++|+++|++||+++++|.+|+............. .+...-.....++.|.++.| .-+|+++. +++.+..
T Consensus 180 ~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~g~~GlRiG~~i~-~~~l~~~ 258 (383)
T TIGR03540 180 VAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVG-NADLIAG 258 (383)
T ss_pred cCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCCCcCcccCCCcccCEEEEEecccccCCccceeeEEeC-CHHHHHH
Confidence 977 78999999999999999999975433111111111 11111234456788988654 33788764 4433322
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
...... +... +........+..++. -+.+.+++..++..++++.+.+.|++. ++.+.. |
T Consensus 259 ~~~~~~-~~~~-----------------~~~~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~-~ 317 (383)
T TIGR03540 259 LGKVKT-NVDS-----------------GVFQAIQYAAIAALN-GPQDVVKEIRKIYQRRRDLLLEALKKI-GIDVEK-P 317 (383)
T ss_pred HHHHHH-hccc-----------------CCChHHHHHHHHHHh-CCHHHHHHHHHHHHHHHHHHHHHHHhC-CCEecC-C
Confidence 211110 0000 000011112222232 235666777778888999999999998 788764 4
Q ss_pred CceE-EEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 403 IFSL-VCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 403 ~~~~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..+. +++++.+ . . ...++.+.+.+ .| +.+.+. .+. +.+++|+++ + .++++++..++.|.+
T Consensus 318 ~~~~~~~~~l~~-~-----~--~~~~~~~~ll~~~g-i~v~~g~~f~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~ 382 (383)
T TIGR03540 318 KATFYVWVPVPE-G-----Y--TSAEFAARLLEETG-VVVTPGVGFGEYGEGYIRISL-T--VPDERLEEAVARIKK 382 (383)
T ss_pred CcceEEEEECCC-C-----C--CHHHHHHHHHHHCC-EEEecchhhCccCCCeEEEEe-c--CCHHHHHHHHHHHhh
Confidence 3444 4455532 1 1 12457777654 56 455443 332 346899999 4 357777777777653
No 143
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.84 E-value=9e-19 Score=176.44 Aligned_cols=310 Identities=15% Similarity=0.163 Sum_probs=199.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|...++|+. ++++.|.+. .++|+|||+|+.+++.+... +++.|+++...|.+..
T Consensus 62 ~~p~~~~le~~----lA~l~g~~~---------av~~sSGt~Al~~al~~ll~-----------~Gd~Vi~~~~~y~~t~ 117 (433)
T PRK08134 62 SNPTVAVLEER----VAALEGGVG---------AIATASGQAALHLAIATLMG-----------AGSHIVASSALYGGSH 117 (433)
T ss_pred cChHHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEeCCccHHHH
Confidence 56788888888 899998754 69999999999888765422 6778999998887765
Q ss_pred HHH----HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KAC----QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~----~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+ ...|+ +++.++++ |+++|+++|++.+ .+|++..++|++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~l~~~Gi---~v~~vd~~-------d~~~l~~~i~~~T------klV~~e~~~np~g~v~Di~~I~~la~~~gi~ 181 (433)
T PRK08134 118 NLLHYTLRRFGI---ETTFVKPG-------DIDGWRAAIRPNT------RLLFGETLGNPGLEVLDIPTVAAIAHEAGVP 181 (433)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHhcCCCC------eEEEEECCCcccCcccCHHHHHHHHHHcCCE
Confidence 544 34688 88888753 8999999997654 4788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCchH-HHHH--h-cCCcccccccccccCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRNT-LIQS--L-STNPEFLKNKASQANM 340 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~~-~~~~--~-~~~~~yl~~~~~~~~~ 340 (486)
++||++++.+....+ .. -++|.++++.|||++++.. .|.+++..... +... + ...++...........
T Consensus 182 livD~t~a~~~~~~p-l~------~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 254 (433)
T PRK08134 182 LLVDSTFTTPYLLRP-FE------HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFAE 254 (433)
T ss_pred EEEECCCcccccCCc-hh------cCCCEEEeccccccCCCCCceEEEEEecCccccccccccccccCCcccccccchhh
Confidence 999999987655322 11 1799999999999987753 44555532210 0000 0 0000000000000000
Q ss_pred ccCCC--------CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----------
Q 041829 341 VVDYK--------DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR---------- 402 (486)
Q Consensus 341 ~~~~~--------~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~---------- 402 (486)
..... ......+.......+|..++ |.+.+..++++..++|..+.+.|+++|.++-+.-|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~--gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~yP~l~~~p~~~~ 332 (433)
T PRK08134 255 ESTVAAFLLRARREGLRDFGACLSPMNAWQLLQ--GIETLPLRMERHVANTRKVVAFLASHPAVARVAHPELESHPDHAL 332 (433)
T ss_pred ccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHH
Confidence 00000 00011233345556666554 67789999999999999999999999987644211
Q ss_pred --------CceEEEEEecCCCCCcccchHHHHHHHHHHHccC------c---EEEEee-----eE-------CC--EeEE
Q 041829 403 --------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTG------K---IFISHT-----VL-------SG--KYIL 451 (486)
Q Consensus 403 --------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g------~---~~~~~~-----~~-------~~--~~~l 451 (486)
..++++|.+... .+...++.+.|.--. . ....+. .. .| .+.+
T Consensus 333 ~~~~~~~g~gg~~s~~l~~~-------~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi~~~li 405 (433)
T PRK08134 333 AKRLLPRGAGSVFSFDLKGG-------RAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTI 405 (433)
T ss_pred HHHhCCCCCceEEEEEecCC-------HHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCCCCCeE
Confidence 135788887531 222345666553211 0 011111 00 11 3579
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
|+|+ --||.+.+++.|.+..+.+.
T Consensus 406 Rlsv-----GlE~~~dli~dl~~Al~~~~ 429 (433)
T PRK08134 406 RLSI-----GLEDADDLIDDLKRALKAAE 429 (433)
T ss_pred EEEe-----ccCCHHHHHHHHHHHHHhhh
Confidence 9999 34567777777777766544
No 144
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.84 E-value=1.4e-18 Score=174.07 Aligned_cols=234 Identities=19% Similarity=0.238 Sum_probs=166.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. ..++++|+.++..++.+... +++.|+++...|.+..
T Consensus 63 ~~p~~~~Le~~----lA~l~G~~~---------~~~~~sG~~Ai~~~l~~~l~-----------~Gd~Vl~~~~~y~~~~ 118 (398)
T PRK07504 63 SNPTVDMFEKR----MCALEGAED---------ARATASGMAAVTAAILCQVK-----------AGDHVVAARALFGSCR 118 (398)
T ss_pred CCchHHHHHHH----HHHHhCCCe---------eeEecCHHHHHHHHHHHHhC-----------CCCEEEEcCCchhHHH
Confidence 46777888887 899999876 35677888888766654322 6778888888877644
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+...|+ +++.++ .+|++++++++++. +.+|+++.++|++|.+-|+++|.++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd-------~~d~e~l~~ai~~~------tklV~lesp~NptG~v~dl~~I~~la~~~gi~ 182 (398)
T PRK07504 119 YVVETLLPRYGI---ESTLVD-------GLDLDNWEKAVRPN------TKVFFLESPTNPTLEVIDIAAVAKIANQAGAK 182 (398)
T ss_pred HHHHHHHhhcCe---EEEEEC-------CCCHHHHHHhcCcC------ceEEEEECCCCCCcEecCHHHHHHHHHHcCCE
Confidence 3 3345677 777774 36899999988654 35899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcccccccccccCCccCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDY 344 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 344 (486)
++||++|+.+....+ . . . ++|.++.++||+++++. ..|.+++.++..+.+.+. .++.
T Consensus 183 lvvD~a~a~~~~~~~-~-~----~-gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~---~~~~------------ 240 (398)
T PRK07504 183 LVVDNVFATPLFQKP-L-E----L-GAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQ---DYFR------------ 240 (398)
T ss_pred EEEECCccccccCCc-h-h----h-CCCEEEeeccccccCCccceEEEEEeCcHHHHHHHH---HHHH------------
Confidence 999999976543221 1 1 1 68999999999998764 244344444443322111 1111
Q ss_pred CCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----CC-----------ceEE
Q 041829 345 KDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-P-----RI-----------FSLV 407 (486)
Q Consensus 345 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~-----~~-----------~~~v 407 (486)
..+.....+.+|..++ |.+.+..++++..++++.+.+.|+++|+++-+. | |. .+++
T Consensus 241 -----~~g~~~s~~~A~~~l~--~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~ 313 (398)
T PRK07504 241 -----HTGPSLSPFNAWTLLK--GLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLV 313 (398)
T ss_pred -----HhCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEE
Confidence 1222345566777765 567788999999999999999999999886332 1 21 4589
Q ss_pred EEEec
Q 041829 408 CFRLL 412 (486)
Q Consensus 408 ~f~~~ 412 (486)
+|.+.
T Consensus 314 s~~~~ 318 (398)
T PRK07504 314 AFELK 318 (398)
T ss_pred EEEeC
Confidence 99985
No 145
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.84 E-value=5.7e-18 Score=170.63 Aligned_cols=312 Identities=12% Similarity=0.099 Sum_probs=195.0
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
..|....+..++++++.+|+.+.+|.+.+. ....++|+|+++++..++.+..+ +++.|+++..+|
T Consensus 67 ~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~----~~~i~vt~G~~~al~~~~~~~~~-----------~gd~Vlv~~P~y 131 (394)
T PRK05942 67 HGYPPFEGTASFRQAITDWYHRRYGVELDP----DSEALPLLGSKEGLTHLALAYVN-----------PGDVVLVPSPAY 131 (394)
T ss_pred ccCCCCCCCHHHHHHHHHHHHHHHCCCcCC----CCeEEEccChHHHHHHHHHHhCC-----------CCCEEEEcCCCC
Confidence 455555567899999999999888864320 01367789989888776654432 678899999999
Q ss_pred hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHh
Q 041829 186 SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSN 262 (486)
Q Consensus 186 ~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~ 262 (486)
..+...+...|+ +++.+|++.+++|.+|+++|++++.+. +.+|+++.++|+||.+-+ +++|.++|+++
T Consensus 132 ~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~ 202 (394)
T PRK05942 132 PAHFRGPLIAGA---QIYPIILKPENDWLIDLSSIPEEVAQQ------AKILYFNYPSNPTTATAPREFFEEIVAFARKY 202 (394)
T ss_pred cchHHHHHHcCC---EEEEeecCCccCCccCHHHHHHhcccc------ceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHc
Confidence 998888889999 999999986556889999999988643 457888889999999976 78999999999
Q ss_pred CCEEEeeccccchhccCccchhc--ccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccC
Q 041829 263 GMWFHVDAAYAGSACICPEYRQY--IDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN 339 (486)
Q Consensus 263 g~~lhvD~A~g~~~~~~~~~~~~--~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~ 339 (486)
|+++++|++|+.+.......... +.+.......+.++.|.++.| ..+|+++.. +..+. .+.....+...
T Consensus 203 ~~~iI~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~SfSK~~~~~GlRiG~i~~~-~~l~~-~l~~~~~~~~~------ 274 (394)
T PRK05942 203 EIMLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGN-RHIIQ-GLRTLKTNLDY------ 274 (394)
T ss_pred CeEEEEeccchhhccCCCCCCChhhCCCccccEEEEecchhccCChhhheeeeecC-HHHHH-HHHHHHhhccc------
Confidence 99999999997554311111111 111112234456678987544 458888764 33332 22211111000
Q ss_pred CccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceE-EEEEecCCCCCc
Q 041829 340 MVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSL-VCFRLLPPHNDE 418 (486)
Q Consensus 340 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~-v~f~~~~~~~~~ 418 (486)
+ .+ ......+-.+++ ...+.+++..++..++.+++.+.|++. ++.+. +|..++ +.+++.. .
T Consensus 275 --------~--~~-~~~q~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~-~~~~~~f~~~~~~~-~--- 336 (394)
T PRK05942 275 --------G--IF-SALQKAAETALQ-LPDSYLQQVQERYRTRRDFLIQGLGEL-GWNIP-PTKATMYLWVPCPV-G--- 336 (394)
T ss_pred --------C--CC-HHHHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCeec-CCCeeeEEEEECCC-C---
Confidence 0 00 001112222222 234566777778888888999999887 77765 455554 4445432 1
Q ss_pred ccchHHHHHHHHHHH-ccCcEEEEeeeE--CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 419 DHGNKLNHKLLDDIN-STGKIFISHTVL--SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 419 ~~~~~~~~~l~~~l~-~~g~~~~~~~~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
.+ ..++..++. +.|..+..+..+ .+..++|+++ . .+.+.+...++.|.+
T Consensus 337 --~~--~~~~~~~~l~~~gV~v~~g~~f~~~~~~~iRis~-~--~~~~~l~~~l~~l~~ 388 (394)
T PRK05942 337 --MG--STDFALNVLQKTGVVVTPGNAFGEGGEGYVRISL-I--ADCDRLGEALDRLKQ 388 (394)
T ss_pred --CC--HHHHHHHHHHHCCEEEeCChhhCcCCCCeEEEEe-c--CCHHHHHHHHHHHHH
Confidence 11 133444444 456433333333 2357999999 3 244445555554443
No 146
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.84 E-value=6.2e-19 Score=175.58 Aligned_cols=285 Identities=20% Similarity=0.211 Sum_probs=195.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .+++++|++|+..++.+... +++.|+++...|.+..
T Consensus 38 ~~p~~~~le~~----la~l~g~~~---------a~~~~sG~~Ai~~~l~~l~~-----------~gd~Vl~~~~~y~~~~ 93 (369)
T cd00614 38 GNPTVDALEKK----LAALEGGEA---------ALAFSSGMAAISTVLLALLK-----------AGDHVVASDDLYGGTY 93 (369)
T ss_pred CChhHHHHHHH----HHHHHCCCC---------EEEEcCHHHHHHHHHHHHcC-----------CCCEEEECCCCcchHH
Confidence 56888888888 888888653 68889999999888876543 6778888888887755
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+...|+ +++.++.+ |++++++++++. +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus 94 ~~~~~~~~~~g~---~~~~v~~~-------d~~~l~~~i~~~------~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~ 157 (369)
T cd00614 94 RLFERLLPKLGI---EVTFVDPD-------DPEALEAAIKPE------TKLVYVESPTNPTLKVVDIEAIAELAHEHGAL 157 (369)
T ss_pred HHHHHHHhhcCe---EEEEeCCC-------CHHHHHHhcCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 4 3456677 77777653 688898888642 45888899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+....+ .. .++|.++.+.+|+++++.. .|+++.+++....+ +.....+
T Consensus 158 livD~t~~~~~~~~~-~~------~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~-l~~~~~~------------- 216 (369)
T cd00614 158 LVVDNTFATPYLQRP-LE------LGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQR-LRFLRLA------------- 216 (369)
T ss_pred EEEECCCcchhcCCh-hh------hCCcEEEeccceeccCCCCceEEEEEeCcHHHHHH-HHHHHHh-------------
Confidence 999999987643211 11 1689999999999987643 67777665343322 1111010
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
.+.......+|+.++. .+.+..++++..++++++.+.|+++|+++-+.-| ..++
T Consensus 217 -------~g~~~~p~~a~~~l~~--l~tl~~r~~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i 287 (369)
T cd00614 217 -------LGTILSPFDAWLLLRG--LKTLPLRMERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGV 287 (369)
T ss_pred -------hCCCCCHHHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceE
Confidence 1112334566766654 4667788999999999999999999887644322 3578
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEee--eE----------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHT--VL----------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~--~~----------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.+. .+...++.+.|.-- |. ....+. .. .| .+.+|+|+ .. |
T Consensus 288 ~s~~l~~~-------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~liR~sv-Gl----E 355 (369)
T cd00614 288 FSFELKGG-------LEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHSQLPPEERAAAGITPGLVRLSV-GI----E 355 (369)
T ss_pred EEEEeCCC-------HHHHHHHHHcCCcceEcccCCCCceeeeCCcccccccCCHHHHHhcCCCCCeEEEEe-Cc----C
Confidence 89988631 23334555554321 10 011111 00 02 35899999 32 6
Q ss_pred HHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKA 476 (486)
Q Consensus 464 di~~~~~~l~~~~ 476 (486)
|++.+++.|++..
T Consensus 356 ~~~dl~~dl~~al 368 (369)
T cd00614 356 DVEDLIADLEQAL 368 (369)
T ss_pred CHHHHHHHHHHhh
Confidence 7888888887653
No 147
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.84 E-value=2e-18 Score=172.65 Aligned_cols=232 Identities=21% Similarity=0.222 Sum_probs=167.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .++|+||++|+..++.+... +++.|+++...|.+..
T Consensus 59 ~~p~~~~le~~----la~l~g~~~---------~v~~ssG~~Ai~~al~al~~-----------~Gd~Vi~~~~~y~~t~ 114 (390)
T PRK08133 59 TNPTVTMFQER----LAALEGAEA---------CVATASGMAAILAVVMALLQ-----------AGDHVVSSRSLFGSTV 114 (390)
T ss_pred CChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCcchhHH
Confidence 45667777777 899998754 68899999999888765432 6778888888886644
Q ss_pred ----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+...|+ +++.++++ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~------tklV~ie~p~NptG~v~dl~~I~~la~~~gi~ 178 (390)
T PRK08133 115 SLFEKIFARFGI---ETTFVDLT-------DLDAWRAAVRPN------TKLFFLETPSNPLTELADIAALAEIAHAAGAL 178 (390)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCCcCCHHHHHHHHHHcCCE
Confidence 35566788 88888753 788898888654 35788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-c-eEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-C-SALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~-g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|++|+......| .. .++|.++.++||+++++.. . |+++. ++..+.+.. .++.
T Consensus 179 livD~t~~~~~~~~p-l~------~g~Divv~S~sK~~~g~g~~~GG~vv~-~~~~~~~~~----~~~~----------- 235 (390)
T PRK08133 179 LVVDNCFCTPALQQP-LK------LGADVVIHSATKYLDGQGRVLGGAVVG-SKELMEEVF----GFLR----------- 235 (390)
T ss_pred EEEECCCcccccCCc-hh------hCCcEEEeecceeecCCcceEeEEEEc-CHHHHHHHH----HHHH-----------
Confidence 999999875543222 11 1689999999999987643 3 44544 433332211 1111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..+.....+.+|..++ |.+.+..++++..+++..+.+.|+++|+++.+.-| ..++
T Consensus 236 ------~~g~~~~~~~a~~~l~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~ 307 (390)
T PRK08133 236 ------TAGPTLSPFNAWVFLK--GLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAI 307 (390)
T ss_pred ------HhCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceE
Confidence 1122234456666664 56788899999999999999999999998754322 1358
Q ss_pred EEEEec
Q 041829 407 VCFRLL 412 (486)
Q Consensus 407 v~f~~~ 412 (486)
++|.+.
T Consensus 308 ~s~~l~ 313 (390)
T PRK08133 308 VSFEVK 313 (390)
T ss_pred EEEEEc
Confidence 889885
No 148
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.84 E-value=3.2e-18 Score=172.93 Aligned_cols=342 Identities=11% Similarity=0.042 Sum_probs=210.2
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+... ...|...++..++.+++.+++.+. |.+.+ ....++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~-~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------ 117 (401)
T TIGR01264 50 DPEVMQAMKDSLDSGKYNGYAPTVGALSAREAIASYYHNP-DGPIE-----ADDVVLCSGCSHAIEMCIAALAN------ 117 (401)
T ss_pred CHHHHHHHHHHHhccCCCCCCCCCCCHHHHHHHHHHHhhc-CCCCC-----HHHEEECcChHHHHHHHHHHhCC------
Confidence 344555555544432 233555567788888877777652 32211 12588999999998777765433
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..++..+...++..|+ +++.++++.++++.+|++.|++++++. +.+|+++.++|+||.
T Consensus 118 -----~gd~v~i~~P~y~~~~~~~~~~g~---~v~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~~p~NPtG~ 183 (401)
T TIGR01264 118 -----AGQNILVPRPGFPLYETLAESMGI---EVKLYNLLPDKSWEIDLKQLESLIDEK------TAALIVNNPSNPCGS 183 (401)
T ss_pred -----CCCEEEEeCCCChhHHHHHHHcCC---EEEEeecCCccCCCCCHHHHHHHhccC------ceEEEEcCCCCCCCC
Confidence 566788888888888999999999 999999876556899999999887643 246788899999999
Q ss_pred cC---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCC-ceeeeccccc-CCCCcceEEEEeCch-HHHH
Q 041829 249 VD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEAD-SFNMNAHKWF-LTNFDCSALWVKDRN-TLIQ 322 (486)
Q Consensus 249 id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aD-s~~~~~hK~l-~~p~~~g~l~~r~~~-~~~~ 322 (486)
+- ++++|+++|+++|+++++|.+|..+............-..... .++.++.|.+ ....-+|+++..+.. .+.+
T Consensus 184 ~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~iv~~~~~~~~~~ 263 (401)
T TIGR01264 184 VFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFEPLASLSSTVPILSCGGLAKRWLVPGWRLGWIIIHDRRGILRD 263 (401)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccccHHHcCCCCcEEEEccCcccCCCccceEEEEEecCcchhHHH
Confidence 95 5889999999999999999999865432111111111111112 4466789974 444568988876421 1111
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.+..... +.... +. .+ ......+-..+.....+.+++..++..+..+++.+.|++++++....+.
T Consensus 264 ~~~~~~~-~~~~~-----------~~--~~-~~~q~a~~~~l~~~~~~~l~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~ 328 (401)
T TIGR01264 264 IRDGLVK-LSQRI-----------LG--PC-TIVQGALPSILLRTPQEYFDGTLSVLESNAMLCYGALAAVPGLRPVMPS 328 (401)
T ss_pred HHHHHHH-Hhhcc-----------CC--CC-cHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHhCCCCcccCCC
Confidence 1100000 00000 00 00 0111122222322224567777888888899999999998787654444
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
....+.+++....... .. ...++.+.+. +.|.....+..+...+++|++++ +.+++++..+++|.++.++
T Consensus 329 ~g~f~~~~~~~~~~~~-~~--~~~~~~~~l~~~~gI~v~pg~~f~~~~~iRis~~---~~~~~l~~~l~rl~~~~~~ 399 (401)
T TIGR01264 329 GAMYMMVGIEMEHFPE-FK--NDVEFTERLVAEQSVFCLPGSCFEYPGFFRVVLT---VPVVMMEEACSRIQEFCER 399 (401)
T ss_pred eeeEEEEEecccccCC-CC--CHHHHHHHHHHhCCEEEeCchhcCCCCeEEEEEc---CCHHHHHHHHHHHHHHHhc
Confidence 4445555553210000 00 1245667765 46644443334444569999993 2578999999999887654
No 149
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.84 E-value=5.1e-18 Score=173.66 Aligned_cols=327 Identities=11% Similarity=0.105 Sum_probs=211.9
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
|....+..++.+++.+|+.+.+|.+... .....++|+|+++++...+.+..+ +++.|+++...+..
T Consensus 82 Y~~~~G~~~LR~aiA~~l~~~~~~~~~v---~~~~Iiit~Ga~~al~~l~~~l~~-----------pGd~Vlv~~P~Y~~ 147 (468)
T PLN02450 82 FQDYHGLPAFKNALAEFMSEIRGNKVTF---DPNKLVLTAGATSANETLMFCLAE-----------PGDAFLLPTPYYPG 147 (468)
T ss_pred CCCCCChHHHHHHHHHHHHHhhCCCCCc---ChHHeEEccChHHHHHHHHHHhCC-----------CCCEEEECCCCCCc
Confidence 4444566789999999999887733110 012588999988887766655433 78889999999998
Q ss_pred HHHHHH-HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhC
Q 041829 188 LQKACQ-IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNG 263 (486)
Q Consensus 188 ~~~a~~-~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g 263 (486)
+...+. ..|+ +++.||++.++++.+|+++|++++++..+++.++.+|+++.++||||.+-+ +++|.++|+++|
T Consensus 148 ~~~~~~~~~g~---~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~ 224 (468)
T PLN02450 148 FDRDLKWRTGV---EIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKN 224 (468)
T ss_pred hHHHHhhcCCc---EEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCC
Confidence 888777 5888 999999875556899999999999876556666788889999999999955 667888899999
Q ss_pred CEEEeeccccchhccCccchhcccCC--------cCCC--ceeeecccccC-CCCcceEEEEeCchHHHHHhcCCccccc
Q 041829 264 MWFHVDAAYAGSACICPEYRQYIDGV--------EEAD--SFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLK 332 (486)
Q Consensus 264 ~~lhvD~A~g~~~~~~~~~~~~~~~~--------~~aD--s~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~ 332 (486)
+|+++|.+|+...+..+.+...+.-+ ...+ .+..++.|.++ ...-+|+++..++... +.+.....|..
T Consensus 225 ~~iI~DE~Y~~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~~l~GlRiG~li~~~~~l~-~~~~~~~~~~~ 303 (468)
T PLN02450 225 IHLISDEIYSGTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDLGLPGFRVGAIYSNDEMVV-SAATKMSSFGL 303 (468)
T ss_pred cEEEEEccccccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccCCCCCccEEEEEECCHHHH-HHHHHHhhcCC
Confidence 99999999986543222221111100 0111 44667899887 4566898887654322 22221111110
Q ss_pred ccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-----hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceE-
Q 041829 333 NKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-----ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSL- 406 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~- 406 (486)
...+...++...+.. ..+++..++..+..+.+.+.|+++ ++.+. +|..++
T Consensus 304 ----------------------~s~~~Q~a~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~-gi~~~-~~~~g~f 359 (468)
T PLN02450 304 ----------------------VSSQTQYLLSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAA-GIKCL-KSNAGLF 359 (468)
T ss_pred ----------------------CCHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CCCceEE
Confidence 011222233333322 245667778888888999999988 77654 555554
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+.+++...- ... .-....++.+++.++.++.+.++ .+. +.+++|+++++ .++++++..+++|+++.++..
T Consensus 360 lwi~l~~~~-~~~-~~~~~~~l~~~ll~~~gV~v~PG~~f~~~~~g~~Rl~f~~--~~~~~l~~~l~ri~~~l~~~~ 432 (468)
T PLN02450 360 CWVDMRHLL-KSN-TFEAEMELWKKIVYEVKLNISPGSSCHCTEPGWFRVCFAN--MSEETLDLAMKRLKSFVESDS 432 (468)
T ss_pred EEEEchHhc-CcC-CchHHHHHHHHHHHhCCEEEeCccccCCCCCCEEEEEecC--CCHHHHHHHHHHHHHHHHhcc
Confidence 444543210 000 01112356666665433555554 332 34699999943 368999999999998876544
No 150
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.84 E-value=1.3e-18 Score=173.94 Aligned_cols=286 Identities=15% Similarity=0.162 Sum_probs=191.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .+++++|+.++..++.+... +++.|+++...|....
T Consensus 59 ~~pt~~~Le~~----lA~l~G~~~---------al~~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~~~y~~~~ 114 (386)
T PRK06767 59 GNPTVKLFEER----MAVLEGGEE---------ALAFGSGMAAISATLIGFLK-----------AGDHIICSNGLYGCTY 114 (386)
T ss_pred CCcchHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 56777888888 899999653 68888888887766654432 6778888988887655
Q ss_pred HHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+.. .|+ ++..++ ..|++++++++++. +.+|+++.++|++|.+.|+++|.++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~~-------~~d~~~l~~~i~~~------tklV~lesp~NptG~v~dl~~I~~la~~~g~~ 178 (386)
T PRK06767 115 GFLEVLEEKFMI---THSFCD-------METEADIENKIRPN------TKLIFVETPINPTMKLIDLKQVIRVAKRNGLL 178 (386)
T ss_pred HHHHHHHhhcCe---EEEEeC-------CCCHHHHHHhhCcC------ceEEEEeCCCCCCceecCHHHHHHHHHHcCCE
Confidence 54433 344 444443 34889999888653 35889999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||+||+......+ . ..++|+++.+.+|+++++.. .|+++.++. .+.+........+
T Consensus 179 vivD~a~a~~~~~~p-l------~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~-~i~~~~~~~~~~~------------ 238 (386)
T PRK06767 179 VIVDNTFCSPYLQRP-L------ELGCDAVVHSATKYIGGHGDVVAGVTICKTR-ALAEKIRPMRKDI------------ 238 (386)
T ss_pred EEEECCCcccccCCc-h------hcCCcEEEecCcceecCCCCceeEEEEeChH-HHHHHHHHHHHHh------------
Confidence 999999975433222 1 12789999999999988755 577766553 2322111100000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CceEEEEEec
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------IFSLVCFRLL 412 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------~~~~v~f~~~ 412 (486)
+.....+.+|+.++ |.+.+..++++..++++++.+.|+++|+++.+.-| ..++++|.+.
T Consensus 239 --------g~~~~~~~a~l~~~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~~~~~~~~~~~~gg~vsf~l~ 308 (386)
T PRK06767 239 --------GGIMAPFDAWLLLR--GLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYPEGELASRQMKRGGGVISFSIK 308 (386)
T ss_pred --------CCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCcHHHHHhCCCCCceEEEEEc
Confidence 11123345666554 44566778899999999999999999999865422 3468999985
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEE--------E-Eee-----eE-------C--CEeEEEEEecCCCCCHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIF--------I-SHT-----VL-------S--GKYILRFAVGAPLTEWRHVNAAW 469 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~--------~-~~~-----~~-------~--~~~~lRi~~~~~~~t~~di~~~~ 469 (486)
. ..+...++.+.|..-+... + .+. .. . ..+.+|+|+ --||++.++
T Consensus 309 ~-------~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv-----GlE~~~dl~ 376 (386)
T PRK06767 309 G-------GKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSV-----GLESWEDIV 376 (386)
T ss_pred C-------CHHHHHHHHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEe-----ccCCHHHHH
Confidence 3 1233456777765432110 1 010 00 0 135899999 345677777
Q ss_pred HHHHHHHH
Q 041829 470 EVMQDKAS 477 (486)
Q Consensus 470 ~~l~~~~~ 477 (486)
+.|.+...
T Consensus 377 ~dl~~al~ 384 (386)
T PRK06767 377 SDLEQALK 384 (386)
T ss_pred HHHHHHHh
Confidence 77777654
No 151
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.84 E-value=1.5e-17 Score=168.02 Aligned_cols=340 Identities=14% Similarity=0.129 Sum_probs=214.2
Q ss_pred HHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
++..+..+.....+.....|....+..++.+.+.+|+.+.+|.+.. .. ..++|+|+++++..++.+..+
T Consensus 48 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~-----~~~~I~it~G~~~al~~~~~~l~~----- 117 (403)
T PRK08636 48 PQHIIDKLCESAQKPKTHGYSVSKGIYKLRLAICNWYKRKYNVDLD-----PETEVVATMGSKEGYVHLVQAITN----- 117 (403)
T ss_pred CHHHHHHHHHHhcCCccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCeEEECCChHHHHHHHHHHhCC-----
Confidence 3334444444332222345665667889999999999999886542 12 488999998888777665433
Q ss_pred hCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC-CCccEEEEEecCCccc
Q 041829 168 VGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI-GLIPFFLCATVGTTSS 246 (486)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~-g~~p~~vv~~~~~t~t 246 (486)
+++.|++++.+++.+...++..|+ +++.||++.++++.+|++.|.+.+++..++ ..++.+++.+.|+|||
T Consensus 118 ------~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPT 188 (403)
T PRK08636 118 ------PGDVAIVPDPAYPIHSQAFILAGG---NVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPT 188 (403)
T ss_pred ------CCCEEEEcCCCCcchHHHHHhcCC---EEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCC
Confidence 678899999999999999999999 999999864445799999776666554322 2346788999999999
Q ss_pred cccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC--ceeeecccccCCC-CcceEEEEeCchH
Q 041829 247 TAVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD--SFNMNAHKWFLTN-FDCSALWVKDRNT 319 (486)
Q Consensus 247 G~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~ 319 (486)
|.+-+ +++|+++|++|++|+++|.+|+.+........ .+..++. .| ..+.++.|.++.| .-+|+++. ++..
T Consensus 189 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~-~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~iv~-~~~l 266 (403)
T PRK08636 189 TATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTP-SILEVEGAKDVAVESYTLSKSYNMAGWRVGFVVG-NKKL 266 (403)
T ss_pred CccCCHHHHHHHHHHHHHcCcEEEEeccchhhccCCCCCC-ChhcCCCccccEEEEEecccccCCccceeeeeeC-CHHH
Confidence 99955 67888899999999999999986543211111 1112222 13 2356789999644 56888764 4333
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
+. .+.....+... ..+.. ....+..++. -..+.++++.+...++.+.+.+.|++. ++++.
T Consensus 267 i~-~~~~~~~~~~~----------------~~~~~-~q~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~ 326 (403)
T PRK08636 267 VG-ALKKIKSWLDY----------------GMFTP-IQVAATIALD-GDQSCVEEIRETYRKRRDVLIESFANA-GWELQ 326 (403)
T ss_pred HH-HHHHHHHHhcc----------------cCChH-HHHHHHHHHh-CcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 32 22211111100 00000 0111111222 124556677777888888999999887 67655
Q ss_pred cCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 400 TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 400 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+.....+.+++++.. . ..+ ..++...+.+ .| +.+.+. .+. +.+++||++ . .+++++++.++.|+++
T Consensus 327 ~p~~g~~~~~~l~~~~-~--~~~--~~~l~~~ll~~~g-V~v~pg~~f~~~~~~~iRi~~-~--~~~~~l~~~~~rl~~~ 397 (403)
T PRK08636 327 KPRASMFVWAKIPEPA-R--HLG--SLEFSKQLLTEAK-VAVSPGIGFGEYGDEYVRIAL-I--ENENRIRQAARNIKKF 397 (403)
T ss_pred CCCcceEEEEECCCcc-C--CCC--HHHHHHHHHHhCC-EEEecchhhCcCCCCeEEEEe-c--CCHHHHHHHHHHHHHH
Confidence 4434445555654211 0 001 2456666554 55 444443 332 346999999 3 4789999999999887
Q ss_pred HHH
Q 041829 476 ASA 478 (486)
Q Consensus 476 ~~~ 478 (486)
++.
T Consensus 398 l~~ 400 (403)
T PRK08636 398 LKE 400 (403)
T ss_pred HHh
Confidence 754
No 152
>PRK07337 aminotransferase; Validated
Probab=99.83 E-value=4.6e-18 Score=171.05 Aligned_cols=327 Identities=13% Similarity=0.067 Sum_probs=208.6
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|....+..++++.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~-------- 112 (388)
T PRK07337 46 EPVVEAAARALRRGVTQYTSALGLAPLREAIAAWYARRFGLDVA-----PERIVVTAGASAALLLACLALVE-------- 112 (388)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hHhEEEecCcHHHHHHHHHHhcC--------
Confidence 34455555555444445665667889999999999988886432 12588999999987766654332
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++..+|......++..|. +++.+|++.+++|.+|+++|++++.+. +.+|+++.++|+||.+-
T Consensus 113 ---~gd~Vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~ 180 (388)
T PRK07337 113 ---RGDEVLMPDPSYPCNRHFVAAAEG---RPVLVPSGPAERFQLTAADVEAAWGER------TRGVLLASPSNPTGTSI 180 (388)
T ss_pred ---CCCEEEEeCCCchhhHHHHHHcCC---EEEEeecCCccCCcCCHHHHHhhcCcc------ceEEEEECCCCCCCcCc
Confidence 677899999999999999999998 999999986556899999999988653 24677889999999985
Q ss_pred C---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCce-eeecccccCCC-CcceEEEEeCchHHHHHhc
Q 041829 251 P---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSF-NMNAHKWFLTN-FDCSALWVKDRNTLIQSLS 325 (486)
Q Consensus 251 ~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~-~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~ 325 (486)
+ +++|+++|+++|+++++|.+|..+... +...... .+ ..+.+ +.+++|.++.| .-+|+++..+. .+. .+.
T Consensus 181 ~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~-~~~~~~~-~~-~~~vi~~~S~SK~~~~~G~RiG~~~~~~~-l~~-~l~ 255 (388)
T PRK07337 181 APDELRRIVEAVRARGGFTIVDEIYQGLSYD-AAPVSAL-SL-GDDVITINSFSKYFNMTGWRLGWLVVPEA-LVG-TFE 255 (388)
T ss_pred CHHHHHHHHHHHHHCCCEEEEeccccccccC-CCCcChh-hc-cCCEEEEEechhhcCCchhheeeeecCHH-HHH-HHH
Confidence 4 788899999999999999999764321 1111111 11 23444 45789999655 34888876542 222 221
Q ss_pred CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC---hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 326 TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG---LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
....++.. ....+..+++...+. .+.+++..++..+.++++.+.|+++ ++.+...|
T Consensus 256 ~~~~~~~~--------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~~~p 314 (388)
T PRK07337 256 KLAQNLFI--------------------CASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVPALESL-GFKVPVMP 314 (388)
T ss_pred HHHHHhcc--------------------CCChHHHHHHHHHhccCchHHHHHHHHHHHHHHHHHHHHHHhc-CCccccCC
Confidence 11111100 011223333333332 2346666777788888999999886 66543334
Q ss_pred C-ceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEee-eEC---CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 403 I-FSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHT-VLS---GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 403 ~-~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~-~~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
. ...+.+++..... .... ...++..++. +.| +.+.+. .+. +.+++|+++ .. +++++...+++|.++
T Consensus 315 ~~g~f~~~~~~~~~~-~~~~--~~~~~~~~ll~~~g-v~v~pg~~f~~~~~~~~~Ri~~-~~--~~~~l~~~l~rl~~~ 386 (388)
T PRK07337 315 DGAFYVYADCRGVAH-PAAG--DSAALTQAMLHDAG-VVLVPGRDFGPHAPRDYIRLSY-AT--SMSRLEEAVARLGKL 386 (388)
T ss_pred CeeEEEEEecccccC-CCCC--CHHHHHHHHHHhCC-EEEeCchhhCCCCCCCEEEEEe-cC--CHHHHHHHHHHHHHH
Confidence 4 3444555542100 0001 1245666654 456 555443 332 246999999 33 578888888888764
No 153
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.83 E-value=9.3e-19 Score=176.15 Aligned_cols=308 Identities=14% Similarity=0.162 Sum_probs=195.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|....+|+. ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 67 ~~pt~~~le~~----la~l~g~~~---------~v~fsSG~~Ai~~al~~ll~-----------~Gd~VI~~~~~y~~t~ 122 (437)
T PRK05613 67 TNPTVEALENR----IASLEGGVH---------AVAFASGQAAETAAILNLAG-----------AGDHIVTSPRLYGGTE 122 (437)
T ss_pred cChHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHhcC-----------CCCEEEECCCccHHHH
Confidence 56777888888 899998754 67777788888766654321 6788999998998764
Q ss_pred ----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+...|+ +++.++ ++ .|+++|+++|++++ .+|++...+|++|.+.||++|+++|+++|+.
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-~~-----~d~e~l~~~l~~~t------k~V~~e~~~Np~~~v~di~~I~~la~~~gi~ 187 (437)
T PRK05613 123 TLFLVTLNRLGI---EVTFVE-NP-----DDPESWQAAVQPNT------KAFFGETFANPQADVLDIPAVAEVAHRNQVP 187 (437)
T ss_pred HHHHHHHHhcCe---EEEEEC-CC-----CCHHHHHHhCCccC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCe
Confidence 44566788 888887 32 28999999987653 3677788899999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCch-HHHHH--hcCCcccccccccccCC-
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRN-TLIQS--LSTNPEFLKNKASQANM- 340 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~-~~~~~--~~~~~~yl~~~~~~~~~- 340 (486)
+|||++++.+....+ . . -++|.+++++||+++++. +.|.+++.+.. .+... .....+++.........
T Consensus 188 livD~t~a~g~~~~p-~-~-----~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (437)
T PRK05613 188 LIVDNTIATAALVRP-L-E-----LGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVFPYFVTPDPAYHGL 260 (437)
T ss_pred EEEECCCccccccCh-H-H-----hCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccCCCCCCCccccccc
Confidence 999999976554322 1 1 179999999999998763 33555553321 11000 00000111110000000
Q ss_pred -ccCCC----------CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-------
Q 041829 341 -VVDYK----------DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR------- 402 (486)
Q Consensus 341 -~~~~~----------~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~------- 402 (486)
..++. .+....|-...+..+|..++ |.+.+..+++++.++|..+.+.|+++|.++-+.-|
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~~~p~ 338 (437)
T PRK05613 261 KYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQ--GLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLKDSPW 338 (437)
T ss_pred cccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcceEECCCCCCCcc
Confidence 00000 01112333455667776665 67888999999999999999999999998543211
Q ss_pred -----------CceEEEEEecCCCCCcccchHHHHHHHHHHHccC------cE---EEEeee-----E-------CC--E
Q 041829 403 -----------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTG------KI---FISHTV-----L-------SG--K 448 (486)
Q Consensus 403 -----------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g------~~---~~~~~~-----~-------~~--~ 448 (486)
..++++|.+.+ ..+...++.+.|.--. .+ ...+.. . .| .
T Consensus 339 ~~~~~~~~~~g~gg~~sf~l~~-------~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~Gi~~ 411 (437)
T PRK05613 339 YATKEKLGLKYTGSVLSFDIKG-------GKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGITQ 411 (437)
T ss_pred HHHHHHhcCCCCceEEEEEecC-------CHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhcCCCC
Confidence 13488888853 1223345666553211 00 011110 0 11 3
Q ss_pred eEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 449 YILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 449 ~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+.+|+|+ --||++.+++.|.+..+
T Consensus 412 ~liRlsv-----GlE~~~dLi~Dl~~Al~ 435 (437)
T PRK05613 412 ATVRLSV-----GIEDIDDIIADLEGGFA 435 (437)
T ss_pred CeEEEEe-----ccCCHHHHHHHHHHHHh
Confidence 5899999 34567777777776654
No 154
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=9e-18 Score=156.52 Aligned_cols=358 Identities=10% Similarity=0.060 Sum_probs=239.6
Q ss_pred CCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHH
Q 041829 76 SPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLV 155 (486)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~ 155 (486)
.|.-++-+++.......+.+.+.+.. ...|..+.+...-.+++.+.+-+-+..+-+ ..+.++|+|.++|+-+
T Consensus 70 DPsv~~~~~ts~~a~~Av~~al~Sgk---~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~-----a~DV~ltsGC~qAIe~ 141 (447)
T KOG0259|consen 70 DPSVYPCFRTSQEAEQAVVDALRSGK---GNGYAPSVGILPARRAVAEYLNRDLPNKLT-----ADDVVLTSGCSQAIEL 141 (447)
T ss_pred CCCccccccCCHHHHHHHHHHHhcCC---CCCcCCccccHHHHHHHHHHhhcCCCCccC-----cCceEEeccchHHHHH
Confidence 46666666666666666666666543 235666777777777765554443332211 2368999999999998
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccE
Q 041829 156 VLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPF 235 (486)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~ 235 (486)
++.+.-+ ++-.|+++...++-....|+..|+ +++..++-++.+|++|++.+|+.+++++ +
T Consensus 142 ~i~~LA~-----------p~aNILlPrPGfp~Y~~~a~~~~l---EVR~ydlLPe~~weIDL~~veal~DENT------~ 201 (447)
T KOG0259|consen 142 AISSLAN-----------PGANILLPRPGFPLYDTRAIYSGL---EVRYYDLLPEKDWEIDLDGVEALADENT------V 201 (447)
T ss_pred HHHHhcC-----------CCCceecCCCCCchHHHhhhhcCc---eeEeecccCcccceechHHHHHhhccCe------e
Confidence 8876544 778899999999888888999999 9999999888889999999999999886 5
Q ss_pred EEEEecCCcccccc---CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeee-cccccCCC-Ccce
Q 041829 236 FLCATVGTTSSTAV---DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMN-AHKWFLTN-FDCS 310 (486)
Q Consensus 236 ~vv~~~~~t~tG~i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~-~hK~l~~p-~~~g 310 (486)
+++++.++|+.|.+ +.|++|+++|+++|+.++.|+.|+-..+-...+-+.-.--..+=.++.+ ..|-..+| .-.|
T Consensus 202 AivviNP~NPcGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlG 281 (447)
T KOG0259|consen 202 AIVVINPNNPCGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLG 281 (447)
T ss_pred EEEEeCCCCCCcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccCCceee
Confidence 78999999999998 6799999999999999999999976554332222211111234455554 35655555 4689
Q ss_pred EEEEeCchHHHHHhc---CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Q 041829 311 ALWVKDRNTLIQSLS---TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFE 387 (486)
Q Consensus 311 ~l~~r~~~~~~~~~~---~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 387 (486)
++++.|+....+.-. .-..++.. +.... .+-.-++=..|..--.+-|...+.-...+++...
T Consensus 282 Wi~~hD~~gvf~~~~~~q~~~~~~~~--------------~~~p~-TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y 346 (447)
T KOG0259|consen 282 WIALHDPRGVFRDTKVVQGIKNFLDI--------------IPGPA-TIIQGALPDILEKTPEEFFDKKLSFLKSNADLCY 346 (447)
T ss_pred eEEEecccccccchHHHHHHHHHHhc--------------cCCcc-HhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHH
Confidence 999988643211000 00011100 00000 0001122233444456778888888899999999
Q ss_pred HHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCc-EEEEeeeECCEeEEEEEecCCCCCHHHHH
Q 041829 388 GLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK-IFISHTVLSGKYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 388 ~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~-~~~~~~~~~~~~~lRi~~~~~~~t~~di~ 466 (486)
++|+++|++.....|+..+..+.-..-+. ..+. +....++.+|.++.. +++.+.-+...+|+|+++ ....+.++
T Consensus 347 ~~Lk~IP~l~cp~kPeg~mylmv~l~~s~-~~~~-~dD~dFc~kL~~Eesv~~LPG~af~~~nw~Ri~i---~~~~~~le 421 (447)
T KOG0259|consen 347 SRLKDIPCLTCPVKPEGCMYLMVKLNLSL-FPDI-EDDVDFCQKLAREESVICLPGQAFGLKNWLRIVI---TVEEEMLE 421 (447)
T ss_pred HHHhcCCCcccCcCCCcceEEEeccchhh-hccc-cccHHHHHHHhhhcceEEeccccccCCCeEEEEE---ccChHHHH
Confidence 99999999996666665544322111000 0001 112467777776554 455666677789999999 45678899
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 467 AAWEVMQDKASALLA 481 (486)
Q Consensus 467 ~~~~~l~~~~~~l~~ 481 (486)
+.+++|++.+.+-.+
T Consensus 422 ea~~Rik~Fc~RH~~ 436 (447)
T KOG0259|consen 422 EAFSRIKEFCDRHSK 436 (447)
T ss_pred HHHHHHHHHHHhhhh
Confidence 999999999887653
No 155
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.83 E-value=1e-17 Score=169.21 Aligned_cols=327 Identities=13% Similarity=0.105 Sum_probs=205.2
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+..... ....|....+..++.+.+.+++.. .|.+.+ ....++|+|+|+++..++.....
T Consensus 45 ~~~~~~a~~~~~~-~~~~Y~~~~g~~~lr~~ia~~~~~-~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~------- 110 (397)
T PRK07568 45 PEVFFEAIKNYDE-EVLAYSHSQGIPELREAFAKYYKK-WGIDVE-----PDEILITNGGSEAILFAMMAICD------- 110 (397)
T ss_pred CHHHHHHHHHHhc-CCcCcCCCCCCHHHHHHHHHHHHH-hCCCCC-----cceEEEcCChHHHHHHHHHHhcC-------
Confidence 3445555554332 223455555678888887777653 443221 12589999999998777654422
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCcc-CHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSL-SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~i-d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++...+..+...++..|+ +++.+|++.++++.+ |+++|++++++. +.+|+++.++|+||.
T Consensus 111 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~~~~~~l~~~~~~~------~~~v~i~~p~NPtG~ 177 (397)
T PRK07568 111 ----PGDEILVPEPFYANYNGFATSAGV---KIVPVTTKIEEGFHLPSKEEIEKLITPK------TKAILISNPGNPTGV 177 (397)
T ss_pred ----CCCEEEEecCCCccHHHHHHHcCC---EEEEeecCcccCCCCCCHHHHHHhcCcc------ceEEEEECCCCCCCc
Confidence 567788888887777778888999 999999874333443 689999888653 347888889999999
Q ss_pred cC---ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC--ceeeecccccCC-CCcceEEEEeCchHHH
Q 041829 249 VD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD--SFNMNAHKWFLT-NFDCSALWVKDRNTLI 321 (486)
Q Consensus 249 id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD--s~~~~~hK~l~~-p~~~g~l~~r~~~~~~ 321 (486)
+- ++++|+++|+++|+++++|++|+.+........... .+.. .+ .++.++.|.++. ...+|+++..++..+.
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~~s~~-~~~~~~~~~i~~~S~SK~~~~~G~R~G~~~~~~~~~~~ 256 (397)
T PRK07568 178 VYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKYTSAL-SLEGLEDRVIIIDSVSKRYSACGARIGCLISKNKELIA 256 (397)
T ss_pred cCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCccChh-hcCCCcCCEEEEecchhhccCCCcceEEEecCCHHHHH
Confidence 86 478999999999999999999987543211111111 1111 22 445678999875 4568888876554433
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.........+ ....+...++...+ +.+.++++.++..+.++.+.+.|++++++.+.
T Consensus 257 ~~~~~~~~~~----------------------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~ 314 (397)
T PRK07568 257 AAMKLCQARL----------------------SPPTLEQIGAAALLDTPESYFDEVREEYKKRRDILYEELNKIPGVVCE 314 (397)
T ss_pred HHHHHhhccC----------------------CCCcHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCceec
Confidence 2211110000 00111222222222 45567777888888999999999998887654
Q ss_pred cCCCceE-EEEEecCCCCCcccchHHHHHHHHHHHc------cCcEEEEee-eE---C--CEeEEEEEecCCCCCHHHHH
Q 041829 400 TPRIFSL-VCFRLLPPHNDEDHGNKLNHKLLDDINS------TGKIFISHT-VL---S--GKYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 400 ~~~~~~~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~~~~~~-~~---~--~~~~lRi~~~~~~~t~~di~ 466 (486)
.|..++ +.++++.. + ..++.+.+.+ .| +.+.+. .+ . +..++|+++ . .++++++
T Consensus 315 -~p~g~~~~~~~l~~~-------~--~~~~~~~l~~~~~~~~~g-v~v~pg~~f~~~~~~~~~~iRls~-~--~~~~~~~ 380 (397)
T PRK07568 315 -KPKGAFYIIAKLPVD-------D--AEDFAKWLLTDFNYNGET-VMVAPASGFYATPGLGKNEIRIAY-V--LNEEDLK 380 (397)
T ss_pred -CCCcceEEEEecCCC-------C--HHHHHHHHHhhcccccce-EEEeCchHhcCCCCCCCCeEEEEE-e--CCHHHHH
Confidence 444444 34555321 1 1344455543 35 444443 23 1 236999999 3 3579999
Q ss_pred HHHHHHHHHHHHHH
Q 041829 467 AAWEVMQDKASALL 480 (486)
Q Consensus 467 ~~~~~l~~~~~~l~ 480 (486)
+.++.|.++.++..
T Consensus 381 ~~~~~l~~~l~~~~ 394 (397)
T PRK07568 381 RAMEILKEALEKYN 394 (397)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999998887654
No 156
>PRK10534 L-threonine aldolase; Provisional
Probab=99.83 E-value=8.9e-19 Score=172.59 Aligned_cols=297 Identities=16% Similarity=0.105 Sum_probs=184.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT 184 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~ 184 (486)
...|...|...++|+. +++++|.+. .++++||++++..++.+... +++.|+++...
T Consensus 27 ~~~Y~~~~~~~~L~~~----la~~~g~~~---------~~v~~~g~~a~~~~l~~~~~-----------~gd~vi~~~~~ 82 (333)
T PRK10534 27 DDVYGDDPTVNALQDY----AAELSGKEA---------ALFLPTGTQANLVALLSHCE-----------RGEEYIVGQAA 82 (333)
T ss_pred CcccCCCHHHHHHHHH----HHHHhCCCe---------EEEeCchHHHHHHHHHHhcC-----------CCCeeEEechh
Confidence 3345567888899998 788899875 57888899998888775432 56667778777
Q ss_pred chhHHHH--HHHhC-CCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHH---HHHH
Q 041829 185 HSALQKA--CQIGG-IHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLA---LGNI 258 (486)
Q Consensus 185 H~s~~~a--~~~~g-~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~---I~~i 258 (486)
|.+...+ +...| + .++.++++. +|.+|+++|++++++....+..+.+|+++. +++|.+.|.++ |+++
T Consensus 83 ~~~~~~~~~~~~~~~~---~~~~~~~~~--~~~~d~~~l~~~i~~~~~~~~~~~lv~l~n--p~~G~v~~~~~l~~i~~~ 155 (333)
T PRK10534 83 HNYLYEAGGAAVLGSI---QPQPIDAAA--DGTLPLDKVAAKIKPDDIHFARTRLLSLEN--THNGKVLPREYLKQAWEF 155 (333)
T ss_pred hhhHhcCCchHHhcCc---eEEeecCCC--CCCCCHHHHHHhhcccCcCcccceEEEEec--CCCCeecCHHHHHHHHHH
Confidence 7544432 34444 4 667777653 479999999999865321111244666664 44699977654 5678
Q ss_pred HHHhCCEEEeeccccchhcc--CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccccccccc
Q 041829 259 AKSNGMWFHVDAAYAGSACI--CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKAS 336 (486)
Q Consensus 259 a~~~g~~lhvD~A~g~~~~~--~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~ 336 (486)
|+++++|++||+||...... ....... ....|.++++++|.++.+ .|+.++.+++.+.........+-
T Consensus 156 ~~~~~~~lvvDEA~~~~~~~~~~~~~~~~---~~~~~~~~~s~SK~~~~~--~G~~~~~~~~~i~~~~~~~~~~~----- 225 (333)
T PRK10534 156 TRERNLALHVDGARIFNAVVAYGCELKEI---TQYCDSFTICLSKGLGTP--VGSLLVGNRDYIKRARRWRKMTG----- 225 (333)
T ss_pred HHHcCCeEEeeHHHHHHHHHHcCCCHHHH---HhcCCEEEEEeEcCCCCc--ccceEEcCHHHHHHHHHHHHHhC-----
Confidence 99999999999997522110 1111111 123576677899988776 56544556654433221111110
Q ss_pred ccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCC
Q 041829 337 QANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHN 416 (486)
Q Consensus 337 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~ 416 (486)
.+-...++.+.+++..+ +...+.+++..+.++++.+.|+++ |+++. +|..+++.+++.+
T Consensus 226 --------------~~~~~~~~~~a~~~~~l--~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~nfv~~~~~~--- 284 (333)
T PRK10534 226 --------------GGMRQAGILAAAGLYAL--KHNVARLQEDHDNAAWLAEQLREA-GADVM-RQDTNMLFVRVGE--- 284 (333)
T ss_pred --------------CchhhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHHHHHHHhC-CCccC-CCCceEEEEECCc---
Confidence 00001112222233222 112344455556678999999997 88866 4567777777642
Q ss_pred CcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 417 DEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 417 ~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.....+.+.|.++| +.+.+. ..+|++. +..+|++++++++++|+++.
T Consensus 285 ------~~~~~~~~~l~~~g-i~v~~~-----~~~rl~~-~~r~t~e~~~~~~~~l~~~~ 331 (333)
T PRK10534 285 ------EQAAALGEYMRERN-VLINAS-----PIVRLVT-HLDVSREQLAEVVAHWRAFL 331 (333)
T ss_pred ------hhHHHHHHHHHHcC-eeecCC-----ceEEEEE-EeCCCHHHHHHHHHHHHHHh
Confidence 11245667777787 444443 2589988 66789999999999998654
No 157
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.83 E-value=4.3e-18 Score=170.91 Aligned_cols=326 Identities=11% Similarity=0.084 Sum_probs=208.3
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+..+.+.+.... .....|....+..++++.+.+|+.+.+|++.+ ..+.++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~-~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~-----~~~i~it~G~~~al~~~~~~~~~------- 111 (384)
T PRK06348 45 ESIINAAFEDAK-KGHTRYTDSGGDVELIEEIIKYYSKNYDLSFK-----RNEIMATVGACHGMYLALQSILD------- 111 (384)
T ss_pred HHHHHHHHHHHh-cCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCC-----hhhEEEcCChHHHHHHHHHHhcC-------
Confidence 344444443322 22345655566678999999999888776433 13689999999988777765433
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++...+..+..+++.+|. +++.+|.+++++|.+|+++|++++++. +.+|+++.++|+||.+
T Consensus 112 ----~gd~vlv~~p~y~~~~~~~~~~g~---~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~~ 178 (384)
T PRK06348 112 ----PGDEVIIHEPYFTPYKDQIEMVGG---KPIILETYEEDGFQINVKKLEALITSK------TKAIILNSPNNPTGAV 178 (384)
T ss_pred ----CCCEEEEeCCCCcchHHHHHHcCC---EEEEecCCcCcCCcCCHHHHHHhhCcC------ccEEEEeCCCCCCCcC
Confidence 677899999999999999999999 899998764445789999999988643 3467777899999999
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCCcCCCceeeecccccCC-CCcceEEEEeCchHHHHH
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGVEEADSFNMNAHKWFLT-NFDCSALWVKDRNTLIQS 323 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~~~aDs~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~ 323 (486)
-+ +++|.++|+++|+++++|.+|+.+.... ..... +.+...-..+..++.|.++. ..-+|+++..+ . +.+.
T Consensus 179 ~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~-~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~v~~~-~-~~~~ 255 (384)
T PRK06348 179 FSKETLEEIAKIAIEYDLFIISDEVYDGFSFYE-DFVPMATLAGMPERTITFGSFSKDFAMTGWRIGYVIAPD-Y-IIET 255 (384)
T ss_pred CCHHHHHHHHHHHHHCCeEEEEecccccceeCC-CccchhhcCCCcCcEEEEecchhccCCccccceeeecCH-H-HHHH
Confidence 54 7888999999999999999998764321 11111 11111122455678999874 45688877643 2 2222
Q ss_pred hcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 324 LSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 324 ~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
+.....+.. .+ ...+...++...+ ..+.++++.+...++++++.+.|++++++++. +
T Consensus 256 ~~~~~~~~~-----------------~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~~L~~~~~~~~~-~ 314 (384)
T PRK06348 256 AKIINEGIC-----------------FS---APTISQRAAIYALKHRDTIVPLIKEEFQKRLEYAYKRIESIPNLSLH-P 314 (384)
T ss_pred HHHHHHhcc-----------------CC---CCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCCceec-c
Confidence 211111100 00 0112222222222 23345666777778888899999988777654 5
Q ss_pred CCceEEEE-EecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 402 RIFSLVCF-RLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 402 ~~~~~v~f-~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
|..++++| +++..+ .+ ..++.+.+.+ .|..+..+..+. +..++|+++ . .++++++..++.|+++
T Consensus 315 p~gg~~~~~~~~~~~-----~~--~~~l~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~-~--~~~~~l~~al~~l~~~ 382 (384)
T PRK06348 315 PKGSIYAFINIKKTG-----LS--SVEFCEKLLKEAHVLVIPGKAFGESGEGYIRLAC-T--VGIEVLEEAFNRIEKM 382 (384)
T ss_pred CCeeEEEEEecccCC-----CC--HHHHHHHHHHhCCEEEcCchhhccCCCCeEEEEe-c--CCHHHHHHHHHHHHhh
Confidence 65565543 443211 11 2456666654 464444333332 346999999 3 4788899998888654
No 158
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.83 E-value=2.8e-18 Score=170.63 Aligned_cols=306 Identities=18% Similarity=0.128 Sum_probs=198.6
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
++...++|++ +++++|.+. ++.+++||.|+..|+.+..-. +++.|+++..+..+...
T Consensus 24 g~~~~~fE~~----~a~~~g~~~---------~~~~~sgt~Al~~al~~l~~~----------~gdeVi~p~~t~~~~~~ 80 (363)
T PF01041_consen 24 GPYVEEFEKE----FAEYFGVKY---------AVAVSSGTSALHLALRALGLG----------PGDEVIVPAYTFPATAS 80 (363)
T ss_dssp SHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHTTGG----------TTSEEEEESSS-THHHH
T ss_pred CHHHHHHHHH----HHHHhCCCe---------EEEeCChhHHHHHHHHhcCCC----------cCceEecCCCcchHHHH
Confidence 8999999999 888898654 799999999999988774332 68899999999999999
Q ss_pred HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 191 ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 191 a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
++..+|+ +++.++++++ ++.||+++|+++|++.++ +|++++ ..|...|+++|.++|+++|++++.|+
T Consensus 81 ai~~~G~---~pv~~Di~~~-~~~id~~~~~~~i~~~t~------ai~~~h---~~G~~~d~~~i~~~~~~~~i~lIeD~ 147 (363)
T PF01041_consen 81 AILWAGA---EPVFVDIDPE-TLNIDPEALEKAITPKTK------AILVVH---LFGNPADMDAIRAIARKHGIPLIEDA 147 (363)
T ss_dssp HHHHTT----EEEEE-BETT-TSSB-HHHHHHHHHTTEE------EEEEE----GGGB---HHHHHHHHHHTT-EEEEE-
T ss_pred HHHHhcc---EEEEEeccCC-cCCcCHHHHHHHhccCcc------EEEEec---CCCCcccHHHHHHHHHHcCCcEEEcc
Confidence 9999999 9999999976 589999999999988763 566654 67888899999999999999999999
Q ss_pred cccchhccCccchhcccCCcCCCceeeec--ccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCc
Q 041829 271 AYAGSACICPEYRQYIDGVEEADSFNMNA--HKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQ 348 (486)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDs~~~~~--hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (486)
|++.+... +....|- ..|..++++ .|.+.+ ...|++++++++...+....+..-..... ...+.
T Consensus 148 a~a~g~~~----~g~~~G~-~gd~~~fSf~~~K~i~~-geGG~v~~~~~~~~~~~~~~~~~g~~~~~--------~~~~~ 213 (363)
T PF01041_consen 148 AQAFGARY----KGRPVGS-FGDIAIFSFHPTKIITT-GEGGAVVTNDPELAERARALRNHGRSRDA--------FRRYR 213 (363)
T ss_dssp TTTTT-EE----TTEETTS-SSSEEEEESSTTSSS-S-SS-EEEEESTHHHHHHHHHHTBTTEETSE--------CSTTE
T ss_pred ccccCcee----CCEeccC-CCCceEecCCCCCCCcC-CCCeeEEecHHHHHHHhhhhhccCcCccc--------ccccc
Confidence 99876533 2222222 347666665 488743 35688888887654443221111110000 00000
Q ss_pred cC--CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC------ceEEEEEecCCCCCccc
Q 041829 349 IP--LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI------FSLVCFRLLPPHNDEDH 420 (486)
Q Consensus 349 ~~--~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~------~~~v~f~~~~~~~~~~~ 420 (486)
-+ .|..++.-.+-+++-....+.+.+.+++..++++++.+.|.+++++..+..+. ...+.+++.+..
T Consensus 214 ~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~----- 288 (363)
T PF01041_consen 214 HELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRYREALAGIPGIKPPPIPDGAERSSYYRFPIRLPDEA----- 288 (363)
T ss_dssp ESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHTTGTTEEEEGCGTTTEEBCESSEEEEETCCG-----
T ss_pred ccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccccccccc-----
Confidence 00 12222222333333333356788999999999999999999999987764222 224455554321
Q ss_pred chHHHHHHHHHHHccCcEEEEee--eE------CC----------------EeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFISHT--VL------SG----------------KYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~--~~------~~----------------~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
. ....++.+.|.++|.-..... .+ .. ...+.+-+ ++..+++|+++++++|+
T Consensus 289 ~-~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~~~~~~~~~~P~ae~l~~r~l~LP~-~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 289 L-ADRDELVEALRARGIETRPHYPKPLHRQPVYRSYPYYAPGDLPNAERLSQRLLSLPI-HPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp C-STHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTTGEEEETSSSHHHHHHHHHEEEEEH-STTSCHHHHHHHHHHHH
T ss_pred c-chHHHHHHHHHHCCCcccccccCchhhhHHHHhcCccccCCCHHHHHHHhCeEECcC-CCCCCHHHHHHHhhccC
Confidence 0 124678888888884322211 00 00 14566666 88999999999999885
No 159
>PRK05968 hypothetical protein; Provisional
Probab=99.83 E-value=3.5e-18 Score=170.84 Aligned_cols=246 Identities=16% Similarity=0.179 Sum_probs=173.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .+++++|+.|+..++.+... +++.|+++...|.+..
T Consensus 61 ~~p~~~~le~~----lA~l~g~~~---------av~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~y~~t~ 116 (389)
T PRK05968 61 DNPTVRAFEEM----LAKLEGAED---------ARGFASGMAAISSTVLSFVE-----------PGDRIVAVRHVYPDAF 116 (389)
T ss_pred CChhHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEeCCCchHHH
Confidence 45667788887 899999865 56778888888777754322 6778888888877533
Q ss_pred ----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+...|+ +++.++.+ |++++++++ +. +.+|+++.++++++.+.|+++|+++|+++|++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i-~~------tklV~ie~pt~~~~~~~dl~~i~~la~~~gi~ 179 (389)
T PRK05968 117 RLFETILKRMGV---EVDYVDGR-------DEEAVAKAL-PG------AKLLYLESPTSWVFELQDVAALAALAKRHGVV 179 (389)
T ss_pred HHHHHHHHHcCc---eEEEeCCC-------CHHHHHHhc-cc------CCEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 46667788 88887632 889998887 22 34788888999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+....+ .. .++|.++.+++|++++|.+ .|+++ .+++.+.+......+++.
T Consensus 180 vivD~a~a~~~~~~p-~~------~g~Divv~S~tK~l~g~~~~~gG~i~-~~~~~~~~l~~~~~~~~g----------- 240 (389)
T PRK05968 180 TMIDNSWASPVFQRP-IT------LGVDLVIHSASKYLGGHSDTVAGVVA-GSKEHIARINAEAYPYLG----------- 240 (389)
T ss_pred EEEECCCcchhccCc-hh------cCCcEEEeeccccccCCCCeEEEEEE-ECHHHHHHHHHHHHHhCC-----------
Confidence 999999976543222 11 1689999999999998855 56555 444433322211111111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------CceEEEEEe
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR------------IFSLVCFRL 411 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~------------~~~~v~f~~ 411 (486)
-....+.+|..++ +.+.+..++++..++++++.+.|+++|+++.+..| ..++++|.+
T Consensus 241 ---------~~~~~~~A~~~l~--~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~g~g~~~sf~~ 309 (389)
T PRK05968 241 ---------AKLSPFEAWLLLR--GLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPAGLSGTSGLFSFIF 309 (389)
T ss_pred ---------CCCChHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHHhCCCCceEEEEEE
Confidence 1123456666554 45677899999999999999999999999766533 135899998
Q ss_pred cCCCCCcccchHHHHHHHHHHHc
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINS 434 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~ 434 (486)
.+ .....++.+.|..
T Consensus 310 ~~--------~~~~~~f~~~L~~ 324 (389)
T PRK05968 310 RE--------GIDVRAFADALKL 324 (389)
T ss_pred CC--------HHHHHHHHHhCCc
Confidence 63 1223567777654
No 160
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.83 E-value=3.4e-18 Score=169.60 Aligned_cols=289 Identities=15% Similarity=0.145 Sum_probs=192.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|....+|+. ++++.|.. +.++++||++|+..++.+..+ +++.|+++...|....
T Consensus 59 ~npt~~~Le~~----iA~le~~~---------~~~~~~sG~~Ai~~~l~all~-----------~GD~Vvv~~~~Y~~t~ 114 (394)
T PRK09028 59 GTPTHFAFQAA----IVELEGGA---------GTALYPSGAAAISNALLSFLK-----------AGDHLLMVDSCYEPTR 114 (394)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEECCHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 36777788888 77776643 378999999998887765433 6788888888886665
Q ss_pred HH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
.. ....|+ ++..++.+ +.+.+++++++. +.+|+++.++|++|.+.|+++|+++||++|++
T Consensus 115 ~l~~~~l~~~Gi---~v~~v~~~-------~~e~l~~~l~~~------TklV~lespsNPtg~v~dl~~I~~la~~~g~~ 178 (394)
T PRK09028 115 DLCDKILKGFGI---ETTYYDPM-------IGEGIRELIRPN------TKVLFLESPGSITMEVQDVPTLSRIAHEHDIV 178 (394)
T ss_pred HHHHHhhhhcce---EEEEECCC-------CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 344677 77666532 557788877654 45899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+...-| .. -++|.+..+.|||++++.+ .|++ +.+++.+.+. .....
T Consensus 179 lvvD~t~a~p~~~~P-l~------~GaDivv~S~tK~l~Gh~d~~~G~~-~~~~~~~~~l-~~~~~-------------- 235 (394)
T PRK09028 179 VMLDNTWASPINSRP-FE------MGVDISIQAATKYIVGHSDVMLGTA-TANEKHWDQL-REHSY-------------- 235 (394)
T ss_pred EEEECCccccccCCc-cc------cCceEEEEeCCeEecCCCCEEEEEE-ECCHHHHHHH-HHHHH--------------
Confidence 999999987643322 21 1799999999999998843 4443 5554432221 10000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..|....+..+|..++ |.+.+.-+++++.++|..+.+.|+++|.++-+.-| ..++
T Consensus 236 ------~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 307 (394)
T PRK09028 236 ------LMGQCTSPDDVYLAMR--GLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGL 307 (394)
T ss_pred ------hcCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCce
Confidence 1222345567776665 66778999999999999999999999988644222 2458
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeee-----EC-----CEeEEEEEecCCCCCHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTV-----LS-----GKYILRFAVGAPLTEWRHVNA 467 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~~-----~~~~lRi~~~~~~~t~~di~~ 467 (486)
++|.+...+ .+...++.+.|.-- |. ....+.. .. ..+.+|+|+ . -||.+.
T Consensus 308 ~sf~l~~~~------~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~~~~~~~~~~liR~sv-G----lEd~~d 376 (394)
T PRK09028 308 FSFVLKQGD------PKAVTALVEGMQHFKMGFSWGGFESLILGVFGINKLRTATNWDFSKPLIRLHI-G----LEDVDD 376 (394)
T ss_pred EEEEECCCC------HHHHHHHHHhCCcceEecccCCCcceeECCCCcCccCchhhhcCCCCeEEEEe-C----cCCHHH
Confidence 999985311 22234566655311 10 0111100 00 114799999 3 345666
Q ss_pred HHHHHHHHHHHHH
Q 041829 468 AWEVMQDKASALL 480 (486)
Q Consensus 468 ~~~~l~~~~~~l~ 480 (486)
+++.|.+..+...
T Consensus 377 Li~Dl~~Al~~~~ 389 (394)
T PRK09028 377 LIADLEAGFERYN 389 (394)
T ss_pred HHHHHHHHHHHHH
Confidence 6777666665543
No 161
>PRK08068 transaminase; Reviewed
Probab=99.83 E-value=8.3e-18 Score=169.20 Aligned_cols=321 Identities=9% Similarity=0.014 Sum_probs=204.7
Q ss_pred HHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 93 LGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 93 ~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
+.+.+...++.. ...|...++..++.+++.+|+.+.+|.+.+ .. +.++|+|+++++..++.+...
T Consensus 50 ~~~~~~~~~~~~~~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~-----~~~~i~it~G~~~~l~~~~~~~~~-------- 116 (389)
T PRK08068 50 IVEALQEAAENPANHKYSPFRGYPFLKEAAADFYKREYGVTLD-----PETEVAILFGGKAGLVELPQCLMN-------- 116 (389)
T ss_pred HHHHHHHHHhCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCccEEEcCCcHHHHHHHHHHhCC--------
Confidence 455555544432 234545567889999999999888886432 12 478899988887765554322
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++..++..+..+++..|+ +++.+|++.++++.+|+++|++++.+. +.+|+++.|+||||.+-
T Consensus 117 ---~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPTG~~~ 184 (389)
T PRK08068 117 ---PGDTILVPDPGYPDYLSGVALARA---QFETMPLIAENNFLPDYTKIPEEVAEK------AKLMYLNYPNNPTGAVA 184 (389)
T ss_pred ---CCCEEEEcCCCCcchHHHHHhcCC---EEEEeecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCCcC
Confidence 677899999999999999999999 999999986545789999999888543 35788888999999996
Q ss_pred Ch---HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc--CCCceeeecccccCCC-CcceEEEEeCchHHHHHh
Q 041829 251 PL---LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE--EADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSL 324 (486)
Q Consensus 251 ~l---~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~--~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~ 324 (486)
+. ++|+++|+++++++++|.+|+.+..............+ .-..++.++.|.++.| .-+|+++. +++.+....
T Consensus 185 s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~~~-~~~l~~~l~ 263 (389)
T PRK08068 185 TKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIELYTLSKTFNMAGWRVAFAVG-NESVIEAIN 263 (389)
T ss_pred CHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCCCcChhhCCCccCCEEEEecchhccCCccceeEeEec-CHHHHHHHH
Confidence 65 67888899999999999999754321111111111111 1224566789999654 44788764 443332211
Q ss_pred cCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 325 STNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.....+.. +. .+....++...+ +.+.+++..++..+.++++.+.|+++ ++.+. +|
T Consensus 264 ~~~~~~~~-------------------~~--~~~~q~~~~~~l~~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-~~ 320 (389)
T PRK08068 264 LLQDHLFV-------------------SL--FGAIQDAAIEALLSDQSCVAELVARYESRRNAFISACREI-GWEVD-AP 320 (389)
T ss_pred HHHhhccC-------------------CC--ChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CC
Confidence 11111110 00 011112222222 34667788888888999999999887 77654 55
Q ss_pred CceEE-EEEecCCCCCcccchHHHHHHHHHHHcc-CcEEEEee-eE--CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 403 IFSLV-CFRLLPPHNDEDHGNKLNHKLLDDINST-GKIFISHT-VL--SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 403 ~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~-~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..+++ .+.+.+. . ...++.+.|.++ | +.+.++ .+ .+..++|+++ . +.++.+...++.|.+
T Consensus 321 ~g~~~~~v~~~~~------~--~~~~~~~~l~~~~g-i~v~pg~~f~~~~~~~iRi~~-~--~~~~~l~~al~~l~~ 385 (389)
T PRK08068 321 KGSFFAWMPVPKG------Y--TSEQFADLLLEKAH-VAVAPGNGFGEHGEGYVRVGL-L--TDEERLREAVERIGK 385 (389)
T ss_pred CeeEEEEEECCCC------C--CHHHHHHHHHHhCC-EEEecchHhCccCCCeEEEEE-c--CCHHHHHHHHHHHHH
Confidence 55554 4555421 1 124677777754 6 555443 22 2346999999 3 355666666666654
No 162
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=6.7e-18 Score=170.68 Aligned_cols=318 Identities=11% Similarity=0.032 Sum_probs=196.5
Q ss_pred cccccChhhHHHHHHHHHHHHHHc--CCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCC
Q 041829 106 FSWITSPAATELEMIVLDWLAKLL--KLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQ 183 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~--g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (486)
..|....+..++.+.+.+|+.+.. +.+++ +.++|+|+++++..++.+... +++.|+++..
T Consensus 66 ~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~Vlv~~p 127 (404)
T PRK09265 66 QGYSDSKGLFSARKAIMQYYQQKGIPDVDVD-------DIYIGNGVSELIVMAMQALLN-----------NGDEVLVPAP 127 (404)
T ss_pred CCCCCCCCcHHHHHHHHHHHhccCCCCCCcc-------cEEEeCChHHHHHHHHHHhCC-----------CCCEEEEeCC
Confidence 345555566788888777765432 34433 588899888887776654422 6778889999
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAK 260 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~ 260 (486)
+|..+..+++..|. +++.++++.+++|.+|+++|++++.+. +.+|+++.++|+||.+-+ +++|+++|+
T Consensus 128 ~y~~~~~~~~~~g~---~~v~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~ 198 (404)
T PRK09265 128 DYPLWTAAVSLSGG---KPVHYLCDEEAGWFPDLDDIRSKITPR------TKAIVIINPNNPTGAVYSKELLEEIVEIAR 198 (404)
T ss_pred CCcChHHHHHHcCC---EEEEEecccccCCCCCHHHHHHhcccc------ceEEEEECCCCCCCcCCCHHHHHHHHHHHH
Confidence 99999999999998 888888875545789999999988543 347888899999999988 899999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCcee-eecccccCCC-CcceEEEEe-CchH---HHHHhcCCccccccc
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFN-MNAHKWFLTN-FDCSALWVK-DRNT---LIQSLSTNPEFLKNK 334 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~-~~~hK~l~~p-~~~g~l~~r-~~~~---~~~~~~~~~~yl~~~ 334 (486)
++|+++++|.+|+.+............-......++ .++.|.++.| .-+|+++.. +... +.+.+... .+..
T Consensus 199 ~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~pGlRiG~~v~~~~~~~~~~~~~~~~~~-~~~~-- 275 (404)
T PRK09265 199 QHNLIIFADEIYDKILYDGAVHISIASLAPDLLCVTFNGLSKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDML-ASMR-- 275 (404)
T ss_pred HCCCEEEEehhhhhccCCCCCcCCHHHcCCCceEEEEecchhhccCcccceEEEEEeCchHHHHHHHHHHHHH-hccc--
Confidence 999999999999765432111111111111223444 4458998655 447888764 3321 11111100 0000
Q ss_pred ccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-hhHHHHH---HHHHHHHHHHHHHHhcCCCeEEecCCCceEE-EE
Q 041829 335 ASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-ENLQGYI---RNHIQLAKHFEGLVAQDLRFEVVTPRIFSLV-CF 409 (486)
Q Consensus 335 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~---~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v-~f 409 (486)
-....+...++...++. +.+.+.+ ++..+.++.+.+.|++++++++. +|..+++ .+
T Consensus 276 ------------------~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~~~~~~-~p~~g~~l~~ 336 (404)
T PRK09265 276 ------------------LCANVPAQHAIQTALGGYQSINELILPGGRLYEQRDRAWELLNAIPGVSCV-KPKGALYAFP 336 (404)
T ss_pred ------------------cCCCcHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHhcCCCCccc-CCCcceEEEE
Confidence 00112223333333321 2222222 35566778888999888888765 4444444 44
Q ss_pred EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
++...... .......+...+.+.|..+..+..+. +..++|+++ . .+++++++.+++|.++.++
T Consensus 337 ~~~~~~~~---~~~~~~~~~~~l~~~gv~v~pg~~F~~~~~~~~Ri~~-~--~~~e~l~~~l~rl~~~l~~ 401 (404)
T PRK09265 337 KLDPKVYP---IHDDEQFVLDLLLQEKVLLVQGTGFNWPEPDHFRIVT-L--PRVDDLEEAIGRIGRFLSG 401 (404)
T ss_pred EecccccC---CCCHHHHHHHHHHhCCEEEECchhhCCCCCCeEEEEe-C--CCHHHHHHHHHHHHHHHHH
Confidence 55431100 00112345555666774444433332 346999999 3 5799999999999887654
No 163
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.83 E-value=7.8e-18 Score=167.23 Aligned_cols=289 Identities=12% Similarity=0.070 Sum_probs=187.9
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++++.+++.+|.+++ +.++|+|+++++..++.+. . ++.+++ ....+..+...++..|+
T Consensus 58 ~~lr~~ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~l-~-----------~g~viv-~~P~y~~~~~~~~~~g~- 116 (356)
T PRK08056 58 RHLHQALARHHQVPAS-------WILAGNGETESIFAVVSGL-K-----------PRRAMI-VTPGFAEYRRALQQVGC- 116 (356)
T ss_pred HHHHHHHHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCEEE-eCCCcHHHHHHHHHcCC-
Confidence 3444557888888765 5889998888876665532 1 344444 45667778888999999
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEeeccccch
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~ 275 (486)
+++.+|.++++++.+| +++.+++.+ ++.+|+++.++|+||.+-+ +++|+++|+++++++++|++|..+
T Consensus 117 --~~~~v~~~~~~~~~~~-~~~~~~~~~------~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~ 187 (356)
T PRK08056 117 --EIRRYSLREADGWQLT-DAILEALTP------DLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDF 187 (356)
T ss_pred --eEEEEecccccCCCcc-HHHHHhccC------CCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhcc
Confidence 9999999765446677 344454532 2347888999999999988 888999999999999999999765
Q ss_pred hccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC
Q 041829 276 ACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 354 (486)
.......-..+... .-..++.+++|+++.| .-+|+++..++..+.........+ .
T Consensus 188 ~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~~G~RiG~~v~~~~~~~~~l~~~~~~~-----------------------~ 243 (356)
T PRK08056 188 IPDETGFIPQLADN-PHLWVLRSLTKFYAIPGLRLGYLVNSDDAAVARMRRQQMPW-----------------------S 243 (356)
T ss_pred CCcchHHHHHhccC-CCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC-----------------------c
Confidence 42111111122222 2356788999999844 568988776544333221111010 0
Q ss_pred CCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 355 FRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 355 ~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
...+...++...+ +.+..++..++..+.++++.+.|++++++.+. ++..+.+.+++... ..++.+.|.
T Consensus 244 ~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~~~~~~~~~~----------~~~~~~~l~ 312 (356)
T PRK08056 244 INAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALPLLTVW-PGRANYLFLRCERP----------DIDLQRALL 312 (356)
T ss_pred hhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCCCcEEEEEcCCC----------hHHHHHHHH
Confidence 1112333333333 34455666777888899999999998888765 45555555555321 145777787
Q ss_pred ccCcEEEEeeeECC--EeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 434 STGKIFISHTVLSG--KYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 434 ~~g~~~~~~~~~~~--~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+.|.....+..+.+ .+++|+++ + +.++.++++++|+++.
T Consensus 313 ~~gI~v~~~~~f~~~~~~~iRis~-~---~~~~~~~l~~~l~~~~ 353 (356)
T PRK08056 313 TQRILIRSCANYPGLDSRYYRVAI-R---SAAENERLLAALRNVL 353 (356)
T ss_pred HCCeEEEECCCCCCCCCCEEEEEE-c---CHHHHHHHHHHHHHHH
Confidence 77744443333322 35899998 3 6789999999998764
No 164
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.83 E-value=5e-18 Score=169.96 Aligned_cols=325 Identities=14% Similarity=0.101 Sum_probs=202.7
Q ss_pred cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecC
Q 041829 103 IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASD 182 (486)
Q Consensus 103 ~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 182 (486)
.+...|..+++..+||++ +++++|.+. .++|+|||+|+..++.+... ++++| ++.
T Consensus 44 ~gd~~Y~~~~g~~~Leea----ia~~~g~~~---------vv~t~~Gt~Al~la~~al~~-----------pGD~V-~~~ 98 (431)
T cd00617 44 LGDEAYAGSKSFYDLEDA----VQDLFGFKH---------IIPTHQGRGAENILFSILLK-----------PGRTV-PSN 98 (431)
T ss_pred hCCCccCCCCCHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHHHHhCC-----------CCCEE-ccC
Confidence 333468889999999999 778888764 79999999999988776533 66666 454
Q ss_pred CCchhHHHHHHHhCCCCCCeEEEeCCCCC--------CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc-cccC---
Q 041829 183 QTHSALQKACQIGGIHPQNFRVLKTDSST--------NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS-TAVD--- 250 (486)
Q Consensus 183 ~~H~s~~~a~~~~g~g~~~v~~v~~~~~~--------~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t-G~id--- 250 (486)
....+....+...|. .++.+++++.. .|.+|+++|+++|++... .++.+|+++.++|++ |..-
T Consensus 99 ~~f~~~~~~i~~~Ga---~pv~v~i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~--~~~~~I~v~~p~N~~gG~~~s~~ 173 (431)
T cd00617 99 MHFDTTRGHIEANGA---VPVDLVIDEAHDAQELIPFKGNIDVAKLEKLIDEVGA--ENIPYIVLTITNNTAGGQPVSMA 173 (431)
T ss_pred CcccchHHHHHhCCC---EeEEEecccccccccccCCCCCcCHHHHHHHhCcccC--CCccEEEEECCcCCCCCccCCHH
Confidence 444456677888899 99999997532 245999999999975411 124578888888887 7774
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchh-ccC----ccch-----hcc-cCCcCCCceeeecccccCCCCcceEEEEeCchH
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSA-CIC----PEYR-----QYI-DGVEEADSFNMNAHKWFLTNFDCSALWVKDRNT 319 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~-~~~----~~~~-----~~~-~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~ 319 (486)
++++|+++|++||+++|.|+|+.... .+. +.+. ... .-.+.+|++++++||-+.+|. .|+++.++++.
T Consensus 174 ~l~~i~eia~~~gi~li~DaAr~~~na~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~-GG~i~~~d~~l 252 (431)
T cd00617 174 NLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI-GGFLALRDDEL 252 (431)
T ss_pred HHHHHHHHHHHcCCEEEEEchhhHhhhhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc-ceEEEeCcHHH
Confidence 56788999999999999999965321 111 1111 110 012368999999999988875 56777777654
Q ss_pred HHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHH-HHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 320 LIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLK-LWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 320 ~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~-~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
+.+..... +.... +...++-..+.+. +..++... .+ .+.+++..+.+++|.+.|++. |+.+
T Consensus 253 ~~~~~~~~--~~~~~------------~~~~gG~~~r~~~A~A~gL~e~-~~--~~~l~~~~~~r~~l~~~L~~~-G~~v 314 (431)
T cd00617 253 YEEARQRV--VLYEG------------FVTYGGMAGRDMEALAQGLREA-VE--EDYLRHRVEQVRYLGDRLDEA-GVPI 314 (431)
T ss_pred HHHHHHhc--cccCC------------ccccccccHHHHHHHHHHHHhc-cc--HHHHHHHHHHHHHHHHHHHHC-CCCc
Confidence 44322111 00000 0001111111111 11133221 11 244555666779999999998 8988
Q ss_pred ecCCCceEEEEEecCC--CCCcccchHHHHHHHHHHHccCcEE-EEeeeE------C-------CEeEEEEEecCCCCCH
Q 041829 399 VTPRIFSLVCFRLLPP--HNDEDHGNKLNHKLLDDINSTGKIF-ISHTVL------S-------GKYILRFAVGAPLTEW 462 (486)
Q Consensus 399 ~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~l~~~l~~~g~~~-~~~~~~------~-------~~~~lRi~~~~~~~t~ 462 (486)
+.|.....+.+....- .....+. ....+...|.++.++. +.-..+ . .-..+|+++.-..-|.
T Consensus 315 ~~P~Ggh~v~~d~~~~~~~~~~~~~--~~~~la~~L~~e~gV~~~~~g~~~~~~~~~~~~~~~~~~~~~rl~~prr~~t~ 392 (431)
T cd00617 315 VEPAGGHAVFIDAREFLPHIPQEQF--PAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELELVRLAIPRRVYTQ 392 (431)
T ss_pred cCCCcceEEEEEhHHhcCCCCcccC--cHHHHHHHHHHHcCeeEEeecceecccCCCCCcccCCccceeEEeccccccCH
Confidence 7655554554454321 0000001 2355665555544343 321111 1 1268999995556699
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASA 478 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~ 478 (486)
+++|.+.++|..+.++
T Consensus 393 ~~~~~~~~~~~~~~~~ 408 (431)
T cd00617 393 DHMDYVAAAVIALYER 408 (431)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999998865
No 165
>PLN02271 serine hydroxymethyltransferase
Probab=99.83 E-value=4.9e-18 Score=170.00 Aligned_cols=329 Identities=12% Similarity=0.042 Sum_probs=209.0
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCC---C
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQ---T 184 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~---~ 184 (486)
|.......++|..+.+...++||++...+ +..+-.-+||.||+.++.+... +++.|+..+. .
T Consensus 186 y~G~~~iD~iE~la~era~~lF~~~~~~~----gaNVQp~SGs~AN~aV~~ALl~-----------PGD~IL~ldl~~GG 250 (586)
T PLN02271 186 YTGNQYIDQIERLCCERALAAFGLDSEKW----GVNVQPYSCTSANFAVYTGLLL-----------PGDRIMGLDSPSGG 250 (586)
T ss_pred CCCChhHHHHHHHHHHHHHHHhCCccccc----ccceeeccHHHHHHHHHHHhcC-----------CCCEEEEecCCCCC
Confidence 44556778999999999999999876311 1135555889999988876543 7888887544 3
Q ss_pred chhHH------HHHHHhCCCCCCeEEEe--CCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHH
Q 041829 185 HSALQ------KACQIGGIHPQNFRVLK--TDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALG 256 (486)
Q Consensus 185 H~s~~------~a~~~~g~g~~~v~~v~--~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~ 256 (486)
|.+.. +.+...|+ .+..+| ++++ ++.+|.++|++..... +|.+|++.+..++ ..-|+++|+
T Consensus 251 Hlshg~~~~~g~~vs~sG~---~~~~vpY~~d~~-~g~IDyd~lek~a~~~-----rPKLII~g~Sayp--r~~D~~~i~ 319 (586)
T PLN02271 251 HMSHGYYTPGGKKVSGASI---FFESLPYKVNPQ-TGYIDYDKLEEKALDF-----RPKILICGGSSYP--REWDYARFR 319 (586)
T ss_pred chhcccccccccccccccc---eEEEEEcccccc-cCccCHHHHHHHhhhc-----CCeEEEECchhcc--CcCCHHHHH
Confidence 55543 23345566 556666 5543 4799999999865332 3778887655544 668999999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCC-ccccccc-
Q 041829 257 NIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTN-PEFLKNK- 334 (486)
Q Consensus 257 ~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~-~~yl~~~- 334 (486)
+||+++|++++||+||..+.+....+... +..+|++++++||||.+|.| |++++++... ...... ..+-...
T Consensus 320 eIAdevGA~LmvD~AH~aGLIa~g~~~sP---~~~aDvvt~TTHKtLrGPrG-G~I~~r~~~~--~~~~g~~gs~s~~~~ 393 (586)
T PLN02271 320 QIADKCGAVLMCDMAHISGLVAAKECVNP---FDYCDIVTSTTHKSLRGPRG-GIIFYRKGPK--LRKQGMLLSHGDDNS 393 (586)
T ss_pred HHHHHcCCEEEEECcccccccccCcCCCC---CcCCcEEEeCCcccCCCCCc-eEEEeccccc--ccccCCccccccccc
Confidence 99999999999999999888765433222 33799999999999999998 8888875421 000000 0000000
Q ss_pred ccccCCccCCCC-CccCCCCCCC-cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEe
Q 041829 335 ASQANMVVDYKD-WQIPLGRRFR-SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRL 411 (486)
Q Consensus 335 ~~~~~~~~~~~~-~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~ 411 (486)
..+.....+..- ..++.|.... ..++..+++......|++..++..++|+.|.+.|.+. |++++. ..+.++|.+.+
T Consensus 394 ~~d~~~kI~~aVfPglqgGphn~~IAalAvalkea~~~efk~Ya~QVv~NAkaLA~~L~~~-G~~vv~ggTdnHlvLvDl 472 (586)
T PLN02271 394 HYDFEEKINFAVFPSLQGGPHNNHIAALAIALKQVATPEYKAYMQQVKKNAQALASALLRR-KCRLVTGGTDNHLLLWDL 472 (586)
T ss_pred cHHHHHHhhcccCCccccChhHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHC-CCeEeeCCCCcceeeecC
Confidence 000000001100 1445554433 3455667776666677899999999999999999987 999875 34567777777
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE------CCEeEEEEEe---cCCCCCHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL------SGKYILRFAV---GAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~~~~~lRi~~---~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+.+.+ . ....+.|.+.| +.+....+ .....+||.. +.....++|++++.+.|.++++
T Consensus 473 ~~~g~~----G---~~ae~~Le~~~-I~~Nkn~iP~d~~~~~psGiRiGT~alT~rG~~e~d~~~iA~~i~~~~~ 539 (586)
T PLN02271 473 TTLGLT----G---KNYEKVCEMCH-ITLNKTAIFGDNGTISPGGVRIGTPAMTSRGCLESDFETIADFLLRAAQ 539 (586)
T ss_pred cccCCC----H---HHHHHHHHHcC-eEeccccCCCCCCCCCCCcccccCHHHHhcCCCcHHHHHHHHHHHHHHh
Confidence 653311 1 22223333334 33322111 1124799876 2334467889888888877765
No 166
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.83 E-value=3.9e-18 Score=177.10 Aligned_cols=355 Identities=14% Similarity=0.154 Sum_probs=221.5
Q ss_pred HHHHhhcCCCCcCCCCcccccCC--CCC---CHHHHHHHH-HHHhcC--cC--ccccccChhhHHHHHHHHHHHHHHcCC
Q 041829 62 DIQEKILPGVTHWQSPNYFAYYP--SNS---SVAGFLGEM-LSAGLN--IV--GFSWITSPAATELEMIVLDWLAKLLKL 131 (486)
Q Consensus 62 ~~~~~~~~~~~~~~~p~~~~~~~--~~~---~~~~~~~~~-l~~~~n--~~--~~~~~~~~~~~~le~~~~~~la~l~g~ 131 (486)
.|.+....+...|+.|.+.|-.. ..| ......++- +..=+. -. ..-....-...+-|+ ..|+.||.
T Consensus 135 aL~~y~~~~~~sfh~PGHkgG~~f~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe~----~AA~~fgA 210 (714)
T PRK15400 135 ALFKYVREGKYTFCTPGHMGGTAFQKSPVGSLFYDFFGPNTMKSDISISVSELGSLLDHSGPHKEAEE----YIARVFNA 210 (714)
T ss_pred HHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHHH----HHHHHhCC
Confidence 55666667778888888775221 111 222233221 111011 11 111122222233333 38999999
Q ss_pred CCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCC
Q 041829 132 PEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSST 211 (486)
Q Consensus 132 ~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~ 211 (486)
+.+ -++++|+|.+|..++.++.. +++.|++++.+|.|+..++.+.|+ .+++++...+.
T Consensus 211 d~t--------yfvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~haLilsga---~PVYl~P~rn~ 268 (714)
T PRK15400 211 DRS--------YMVTNGTSTANKIVGMYSAP-----------AGSTVLIDRNCHKSLTHLMMMSDV---TPIYFRPTRNA 268 (714)
T ss_pred CcE--------EEEeCchHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eEEEecccccc
Confidence 986 58888889999888776654 788999999999999999999999 99998765432
Q ss_pred C---CccC-----HHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccch
Q 041829 212 N---YSLS-----PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYR 283 (486)
Q Consensus 212 ~---~~id-----~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~ 283 (486)
. +.++ ++.++++|++... -.+|+.+++|.+ |..|.+.++++|+++|+.++ +|||.|||+...+.|.++
T Consensus 269 ~Gi~g~I~~~~~~~e~i~~~i~~~p~-ak~p~~~vit~p-TYdG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~ 344 (714)
T PRK15400 269 YGILGGIPQSEFQHATIAKRVKETPN-ATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYE 344 (714)
T ss_pred cCCccCCCccccCHHHHHHHHHhCcc-ccCccEEEEECC-CCccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccC
Confidence 1 2345 8999999977542 246778888887 68899999999999999887 799999999888877654
Q ss_pred hcccCC-cCC---C--ceeeecccccCCCCcceEEEEeCc---hHHHHHhc----CCcccccccccccCCccCCCCCccC
Q 041829 284 QYIDGV-EEA---D--SFNMNAHKWFLTNFDCSALWVKDR---NTLIQSLS----TNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 284 ~~~~~~-~~a---D--s~~~~~hK~l~~p~~~g~l~~r~~---~~~~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
... ++ .++ | .++.|.||.+.+-.+.+++.++.. +.+.+++. .+|.|+--
T Consensus 345 ~~s-am~~ga~~~~~i~vtQStHKtL~alTQaS~LHvkg~vd~~~~n~a~~m~~STSPsY~l~----------------- 406 (714)
T PRK15400 345 GKC-GMSGGRVEGKVIYETQSTHKLLAAFSQASMIHVKGDVNEETFNEAYMMHTTTSPHYGIV----------------- 406 (714)
T ss_pred CcC-hhhcCCCCCCceEEEEchhhcccchhHHhHHHHcCCCCHHHHHHHHHHHcCCCcHHHHH-----------------
Confidence 221 12 345 5 889999999999888888887653 22222221 12233211
Q ss_pred CCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCc-eEEEEEecCC--------
Q 041829 351 LGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLR------FEVVTPRIF-SLVCFRLLPP-------- 414 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~------~~~~~~~~~-~~v~f~~~~~-------- 414 (486)
. .+=.+.+.+- ..| ++++++..+++..+++.|.++++ |+++.+... ..-||.+.|.
T Consensus 407 -----A--SLD~a~~~m~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~w~~~~~~~~~~~~~~~w~~~p~~~whgf~~ 478 (714)
T PRK15400 407 -----A--STETAAAMMKGNAG-KRLINGSIERAIKFRKEIKRLRTESDGWFFDVWQPDHIDTTECWPLRSDSTWHGFKN 478 (714)
T ss_pred -----H--HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhCCCcccCceEEecChhhcccchhcccCccccccCccc
Confidence 0 1112222222 233 56778888999999999998887 777643210 0112221110
Q ss_pred --------------------CCCc--ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 415 --------------------HNDE--DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 415 --------------------~~~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+.+. .+..--...+.+.|.+.| +.+.-+.. ..+-+.+ ++..|++++++++++|
T Consensus 479 ~~~~~~~lDP~Klti~tpgi~~~g~~~~~Gipg~~v~~~L~e~g-I~~E~~d~---~~iLfl~-s~g~t~~~~~~L~~aL 553 (714)
T PRK15400 479 IDNEHMYLDPIKVTLLTPGMKKDGTMSDFGIPASIVAKYLDEHG-IVVEKTGP---YNLLFLF-SIGIDKTKALSLLRAL 553 (714)
T ss_pred ccccccccCCceEEEEeCCCCCCccccccCCCHHHHHHHHHHcC-CEEEecCC---CeEEEEe-CCCCCHHHHHHHHHHH
Confidence 0000 000011234555665666 44443322 2444555 7889999999999999
Q ss_pred HHHHH
Q 041829 473 QDKAS 477 (486)
Q Consensus 473 ~~~~~ 477 (486)
.++.+
T Consensus 554 ~~f~~ 558 (714)
T PRK15400 554 TDFKR 558 (714)
T ss_pred HHHHH
Confidence 88744
No 167
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.83 E-value=1.6e-17 Score=168.74 Aligned_cols=328 Identities=12% Similarity=0.085 Sum_probs=210.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
....+...+.+++.+++.+.+|..... .....++|+|+++++...+.+..+ +++.|+++...+..+
T Consensus 92 ~~~~G~~~LR~aiA~~l~~~~~~~~~v---~p~~Ivit~G~t~al~~l~~~l~~-----------pGD~Vlv~~P~Y~~f 157 (447)
T PLN02607 92 QDYHGLKSFRQAMASFMEQIRGGKARF---DPDRIVLTAGATAANELLTFILAD-----------PGDALLVPTPYYPGF 157 (447)
T ss_pred CCCcchHHHHHHHHHHHHHhcCCCCCc---CHHHeEEcCChHHHHHHHHHHhCC-----------CCCEEEEcCCCCcch
Confidence 334466789999999999887731110 012588999999887665554333 778899999999888
Q ss_pred HHHHH-HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCC
Q 041829 189 QKACQ-IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGM 264 (486)
Q Consensus 189 ~~a~~-~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~ 264 (486)
...+. ..|+ +++.|+++.+++|.+|++++++++++..++|.++.+|+++.|+||||.+-+ +++|.++|+++|+
T Consensus 158 ~~~~~~~~g~---~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i 234 (447)
T PLN02607 158 DRDLRWRTGV---KIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNI 234 (447)
T ss_pred HHHHHhcCCc---EEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCC
Confidence 87776 4788 999999886656889999999999887777877888999999999999965 7888899999999
Q ss_pred EEEeeccccchhccCccchhcc---cCCc--C-CC--ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccc
Q 041829 265 WFHVDAAYAGSACICPEYRQYI---DGVE--E-AD--SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~---~~~~--~-aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
++++|.+|+...+..+.+.... .... . .+ .+..+..|-++.| .-+|+++..++... ..+.....|..
T Consensus 235 ~lI~DEiYa~~~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~fg~~GlRvG~ivs~n~~l~-~~~~~~~~~~~--- 310 (447)
T PLN02607 235 HLVSDEIYSGSVFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDLGLPGFRVGTIYSYNDKVV-TTARRMSSFTL--- 310 (447)
T ss_pred EEEEeccccccccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcCCCCcceEEEEEEcCHHHH-HHHHHHhhcCC---
Confidence 9999999987543222221111 1110 0 11 3456789988744 55888887655432 22221111100
Q ss_pred cccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh-----hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceE-EEE
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL-----ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSL-VCF 409 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~-----~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~-v~f 409 (486)
. ..+...++...+.. ..+++..++..+..+.+.+.|++. ++... ++..++ +++
T Consensus 311 ---------------~----s~~~q~~~~~~L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~-gi~~~-~~~ag~fvw~ 369 (447)
T PLN02607 311 ---------------V----SSQTQHLLASMLSDEEFTENYIRTNRERLRKRYEMIVQGLRRA-GIECL-KGNAGLFCWM 369 (447)
T ss_pred ---------------C----CHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc-cCCeeEEEEE
Confidence 0 11122222222221 234455566677778888899886 77655 444444 444
Q ss_pred EecCCCCCcccchHHHHHHHHHHHccCcEEEEeee-EC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV-LS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~-~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
++...-... ..+...++.+++.++.++.+.++. +. ..+++|+++++ .++++++..+++|.++.++-..+
T Consensus 370 ~L~~~~~~~--~~~~e~~l~~~ll~~~gV~v~pG~~f~~~~~g~fRi~fa~--~~~~~l~~gl~Ri~~~l~~~~~~ 441 (447)
T PLN02607 370 NLSPLLETP--TREGELALWDSILREVKLNISPGSSCHCSEPGWFRVCFAN--MSEDTLEVALKRIHRFMDRRKTA 441 (447)
T ss_pred EchHhhcCC--CchhHHHHHHHHHHhCCEEEcCccccCCCCCCEEEEEecc--CCHHHHHHHHHHHHHHHHHHHhh
Confidence 553210000 011224566677664335565543 33 35799999943 36899999999999988755433
No 168
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=3.5e-18 Score=168.96 Aligned_cols=288 Identities=14% Similarity=0.103 Sum_probs=198.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++-|.+. +++++||+.|+..++.+... +++.|+++...|....
T Consensus 60 ~nPt~~~le~~----la~LEg~~~---------a~~~~SGmaAi~~~~~~ll~-----------~GD~Vv~~~~~Yg~t~ 115 (395)
T PRK08114 60 GTLTHFSLQEA----MCELEGGAG---------CALYPCGAAAVANAILAFVE-----------QGDHVLMTGTAYEPTQ 115 (395)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEEhHHHHHHHHHHHHHcC-----------CCCEEEEeCCCcHHHH
Confidence 67888899998 888887653 78888899888877765432 6788889888887766
Q ss_pred HHH----HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC--
Q 041829 190 KAC----QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG-- 263 (486)
Q Consensus 190 ~a~----~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g-- 263 (486)
..+ +..|+ ++..++. .|++.++++|++++ .+|.+..++|++|.+.||++|+++||++|
T Consensus 116 ~l~~~~l~~~Gi---~v~~vd~-------~d~~~l~~~l~~~T------rlV~~EtpsNp~~~v~DI~~Ia~ia~~~g~g 179 (395)
T PRK08114 116 DFCSKILSKLGV---TTTWFDP-------LIGADIAKLIQPNT------KVVFLESPGSITMEVHDVPAIVAAVRSVNPD 179 (395)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCCCc------eEEEEECCCCCCCEeecHHHHHHHHHHhCCC
Confidence 554 55688 8888763 37788999987643 58999999999999999999999999985
Q ss_pred CEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC--cceEEEEeCchHHHHHhcCCcccccccccccCCc
Q 041829 264 MWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF--DCSALWVKDRNTLIQSLSTNPEFLKNKASQANMV 341 (486)
Q Consensus 264 ~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~--~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~ 341 (486)
+.++||++++.+.. .+..+. ++|.+..+.|||++++. .+|+++. +++.+.. +.. +.
T Consensus 180 ~~lvVDnT~a~p~~-~~pl~~------GaDivv~S~tKyl~Ghsdv~~G~v~~-~~~~~~~-l~~---~~---------- 237 (395)
T PRK08114 180 AVIMIDNTWAAGVL-FKALDF------GIDISIQAGTKYLVGHSDAMIGTAVA-NARCWEQ-LRE---NS---------- 237 (395)
T ss_pred CEEEEECCCccccc-cCHHHc------CCcEEEEcCcccccCCCcceeEEEEc-CHHHHHH-HHH---HH----------
Confidence 99999999988655 322221 79999999999999995 5675544 3332221 110 00
Q ss_pred cCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Cc
Q 041829 342 VDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IF 404 (486)
Q Consensus 342 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~ 404 (486)
...|....+...|..++ |.+-+.-+++++.++|..+.++|+++|.++-+.-| ..
T Consensus 238 -------~~~G~~~~p~~a~l~~r--gl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~g 308 (395)
T PRK08114 238 -------YLMGQMVDADTAYMTSR--GLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSS 308 (395)
T ss_pred -------HhccCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCc
Confidence 01233345667776665 67788899999999999999999999998644211 24
Q ss_pred eEEEEEecCCCCCcccchHHHHHHHHHHHcc------CcE--EEE---eee--E--------CCEeEEEEEecCCCCCHH
Q 041829 405 SLVCFRLLPPHNDEDHGNKLNHKLLDDINST------GKI--FIS---HTV--L--------SGKYILRFAVGAPLTEWR 463 (486)
Q Consensus 405 ~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~---~~~--~--------~~~~~lRi~~~~~~~t~~ 463 (486)
++++|.+.... ..+...++++.|.-- |.+ .+. +.. . ...+.+|+|+ --|
T Consensus 309 g~~sf~l~~~~-----~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~~~~~~~~~~~liRlSv-----GlE 378 (395)
T PRK08114 309 GLFSFVLKKKL-----TDEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIRPAGEVDFTGTLIRLHI-----GLE 378 (395)
T ss_pred eEEEEEecCcc-----cHHHHHHHHHhCCcceeecccCCccceeccCCchhhhccCChhHhcCCCCeEEEEe-----ccC
Confidence 58899886310 012234455554320 110 111 000 0 0115899999 245
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKASA 478 (486)
Q Consensus 464 di~~~~~~l~~~~~~ 478 (486)
|++.+++.|++..+.
T Consensus 379 d~~DLi~Dl~~Al~~ 393 (395)
T PRK08114 379 DVDDLIADLAAGFAR 393 (395)
T ss_pred CHHHHHHHHHHHHHh
Confidence 677778777776654
No 169
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.82 E-value=1.7e-17 Score=172.45 Aligned_cols=355 Identities=15% Similarity=0.163 Sum_probs=220.1
Q ss_pred HHHHhhcCCCCcCCCCcccccCC--CCC---CHHHHHHHH-HHHhcC----cCccccccChhhHHHHHHHHHHHHHHcCC
Q 041829 62 DIQEKILPGVTHWQSPNYFAYYP--SNS---SVAGFLGEM-LSAGLN----IVGFSWITSPAATELEMIVLDWLAKLLKL 131 (486)
Q Consensus 62 ~~~~~~~~~~~~~~~p~~~~~~~--~~~---~~~~~~~~~-l~~~~n----~~~~~~~~~~~~~~le~~~~~~la~l~g~ 131 (486)
.|.+....+...|+.|.+.|-.. .+| ......++- +..=+. .-..-....-...+-| +..|+.||.
T Consensus 135 aL~~y~~~~~~sfh~PGHkgG~~~~k~p~G~~f~~f~Gen~~r~Dlt~ev~~LddLl~~~G~i~eAe----~~aA~~fgA 210 (713)
T PRK15399 135 ALFTYVKEGKYTFCTPGHMGGTAYQKSPVGCLFYDFFGGNTLKADVSISVTELGSLLDHTGPHLEAE----EYIARTFGA 210 (713)
T ss_pred HHHHHHhCCCceeeCCCCCCCCCCCCCchhHHHHHHhhhhhhhhhccccccCCCCCCCCChHHHHHH----HHHHHHhCC
Confidence 56666667778888888775221 111 222222221 111011 1111112222223333 348999999
Q ss_pred CCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCC
Q 041829 132 PEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSST 211 (486)
Q Consensus 132 ~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~ 211 (486)
+.+ -++++|+|.+|..++.++.. +++.|++++.+|.|+..++.+.|+ .+++++...+.
T Consensus 211 d~t--------yfvvNGTS~~n~av~~a~~~-----------~Gd~VLvdRN~HKSv~~aLilsga---~PVYl~P~~n~ 268 (713)
T PRK15399 211 EQS--------YIVTNGTSTSNKIVGMYAAP-----------AGSTLLIDRNCHKSLAHLLMMSDV---VPIWLKPTRNA 268 (713)
T ss_pred CcE--------EEEeCChHHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHcCC---eeEEecccccc
Confidence 886 58889889999888887654 788999999999999999999999 99998765432
Q ss_pred C---CccCH-----HHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE-EeeccccchhccCccc
Q 041829 212 N---YSLSP-----DSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF-HVDAAYAGSACICPEY 282 (486)
Q Consensus 212 ~---~~id~-----~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l-hvD~A~g~~~~~~~~~ 282 (486)
. +.|++ +.++++|++... -.+|+.+++|.+ |..|.+-++++|+++| |+.+ |||+|||+...+.|.+
T Consensus 269 ~Gi~g~I~~~~~~~e~I~~~i~~~p~-~~~p~~vvit~p-TYdGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~ 343 (713)
T PRK15399 269 LGILGGIPRREFTRDSIEEKVAATTQ-AQWPVHAVITNS-TYDGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIY 343 (713)
T ss_pred cCCcCCCChhhccHHHHHHHHHhCCC-cCCceEEEEECC-CCCceeeCHHHHHHHh---CCCEEEEeccchhhhhcCccc
Confidence 1 24555 999999987543 246788888887 6889999999999999 6665 8999999988777755
Q ss_pred hhc--ccCCcCCCce---eeecccccCCCCcceEEEEeCc---hHHHHHhc----CCcccccccccccCCccCCCCCccC
Q 041829 283 RQY--IDGVEEADSF---NMNAHKWFLTNFDCSALWVKDR---NTLIQSLS----TNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 283 ~~~--~~~~~~aDs~---~~~~hK~l~~p~~~g~l~~r~~---~~~~~~~~----~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
++. +.+..++|.+ +.|.||.+.+-.+++++.++.. +.+.+++. .+|.|+--
T Consensus 344 ~~~sam~~~~~aD~~i~~tQStHKtL~alTQaS~iHvk~~vd~~~~n~a~~m~~STSPsY~Lm----------------- 406 (713)
T PRK15399 344 QGKSGMSGERVPGKVIFETQSTHKMLAAFSQASLIHIKGEYDEETFNEAFMMHTSTSPSYPIV----------------- 406 (713)
T ss_pred CCcChhhCCCCCCeeeeeeeehhccccccchheeeeecCCCCHHHHHHHHHHHcCCCcHHHHH-----------------
Confidence 422 2222257877 9999999999999999999763 22222221 12233211
Q ss_pred CCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCC------eEEecCCCce-EEEEEecCC--------
Q 041829 351 LGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLR------FEVVTPRIFS-LVCFRLLPP-------- 414 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~------~~~~~~~~~~-~v~f~~~~~-------- 414 (486)
. .+=.+.+.+ |..| ++++++..+++..+++.|.++++ |+++.+.... .-||.+.|.
T Consensus 407 -----A--SLD~a~~~m~~~~G-~~l~~~~i~~a~~fR~~l~~~~~~~~~w~f~~~~~~~~~~~~~w~l~p~~~whgf~~ 478 (713)
T PRK15399 407 -----A--SVETAAAMLRGNPG-KRLINRSVERALHFRKEVQRLREESDGWFFDIWQPENVDEAECWPVAPGEQWHGFKD 478 (713)
T ss_pred -----H--HHHHHHHHHHhhhh-HHHHHHHHHHHHHHHHHHHhccccccCceeeecCccccCCccceecCCCcccccccc
Confidence 0 111222222 2233 56778888889999999988766 6766432100 011211110
Q ss_pred ------------------CCC----cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 415 ------------------HND----EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 415 ------------------~~~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+.+ .++..--...+.+.|.+.| +.+.-+.. ..+-+.+ ++..|++++++++++|
T Consensus 479 ~~~~~~~lDP~KltI~t~g~~~~g~~~~~Gi~g~~l~~~L~e~g-I~~E~~d~---~~vL~l~-s~g~t~~~~~~L~~aL 553 (713)
T PRK15399 479 ADADHMFLDPVKVTILTPGMDEQGNMSEEGIPAALVAKFLDERG-IVVEKTGP---YNLLFLF-SIGIDKTKAMGLLRGL 553 (713)
T ss_pred cccccccCCCceEEEEecCcccccccccCCCCHHHHHHHHHHcC-CEEEecCC---CeEEEEe-CCCCCHHHHHHHHHHH
Confidence 000 0000111234555666666 44443322 2444555 7788999999999999
Q ss_pred HHHHH
Q 041829 473 QDKAS 477 (486)
Q Consensus 473 ~~~~~ 477 (486)
.++.+
T Consensus 554 ~~f~~ 558 (713)
T PRK15399 554 TEFKR 558 (713)
T ss_pred HHHHH
Confidence 87744
No 170
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=2.8e-18 Score=170.90 Aligned_cols=285 Identities=16% Similarity=0.193 Sum_probs=190.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .+++++|+.++..++. .. + +++.|+++...|.+..
T Consensus 45 ~~p~~~~le~~----la~l~g~~~---------~l~~~sG~~al~~~l~-ll----~-------~Gd~Vl~~~~~y~~~~ 99 (378)
T TIGR01329 45 GNPTRTALESL----LAKLDKADR---------AFAFSSGMAALDVITR-LL----N-------NGDEIIAGDDLYGGTD 99 (378)
T ss_pred CChHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHH-Hh----C-------CCCEEEEcCCCchHHH
Confidence 34555666666 899999743 6777778766544332 21 1 6778888888887765
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+...|+ +++.++.+ |+++++++++++ +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 100 ~~~~~~~~~~G~---~v~~vd~~-------d~~~le~~i~~~------tklv~le~psnptg~v~dl~~I~~la~~~g~~ 163 (378)
T TIGR01329 100 RLLTQVVPRSGV---VVVHVDTT-------DLDKVKAALGPK------TKLVLLESPTNPLQKIVDIRKISEMAHAQNAL 163 (378)
T ss_pred HHHHHHHHHcCc---EEEEeCCC-------CHHHHHHhcCcC------ceEEEEECCCCCCCeeecHHHHHHHHHHcCCE
Confidence 4 3455788 88888752 889999988643 45899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++++......+ .. . ++|.++.++|||+++|.+ .|+++++++....+... +..
T Consensus 164 vivD~a~~~~~~~~~-l~-----~-g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~----~~~----------- 221 (378)
T TIGR01329 164 VVVDNTMMSPLLCNP-LE-----L-GADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYF----LQN----------- 221 (378)
T ss_pred EEEECCCcccccCCh-hh-----c-CCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHH----HHH-----------
Confidence 999999866543211 11 1 789999999999999876 88888877653222210 100
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe-cC-----C-----------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV-TP-----R-----------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~-~~-----~-----------~~~~ 406 (486)
..|........|..+ .|.+.+..++++..+++..+.+.|+++|.++-+ .| | ..++
T Consensus 222 ------~~G~~~~~~~a~l~~--~~l~tl~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~ 293 (378)
T TIGR01329 222 ------STGSGLAPFDCWLLL--RGIKTLAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSV 293 (378)
T ss_pred ------hcCCcCCHHHHHHHH--ccCCCHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceE
Confidence 011122333445444 366788899999999999999999999887432 21 1 2368
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccC------cE---EEEee-----eE-------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTG------KI---FISHT-----VL-------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g------~~---~~~~~-----~~-------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.. .+...++.+.|..-+ .. ...+. .. .| .+.+|+|+ --|
T Consensus 294 ~sf~~~~--------~~~~~~~~~~L~~~~i~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv-----GlE 360 (378)
T TIGR01329 294 LSFETGS--------VALSKRLVEATKLFSITVSFGSVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSV-----GIE 360 (378)
T ss_pred EEEEECC--------HHHHHHHHHhCcCcccccCCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEe-----ccC
Confidence 8898831 222356666664322 11 11111 00 01 35899999 345
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKASA 478 (486)
Q Consensus 464 di~~~~~~l~~~~~~ 478 (486)
|++.+++.|++..++
T Consensus 361 ~~~dl~~dl~~al~~ 375 (378)
T TIGR01329 361 DVDDLISDLDIAFVT 375 (378)
T ss_pred CHHHHHHHHHHHHHh
Confidence 677778877776654
No 171
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=2.4e-18 Score=173.46 Aligned_cols=309 Identities=17% Similarity=0.173 Sum_probs=197.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH-
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL- 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (486)
..|....||++ ++++.|.+. .++++||+.|+..++..... +++.|+++...|...
T Consensus 62 ~~p~~~~Le~~----lA~leg~~~---------al~~~sG~~Ai~~al~~ll~-----------~GD~Vlv~~~~y~~t~ 117 (431)
T PRK08248 62 MNPTTDVFEKR----IAALEGGIG---------ALAVSSGQAAITYSILNIAS-----------AGDEIVSSSSLYGGTY 117 (431)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEccCchhhHH
Confidence 56777888888 899998653 79999999998888765432 677888888777543
Q ss_pred ---HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 189 ---QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 189 ---~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
...++..|+ +++.++. .|++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 118 ~~~~~~~~~~Gv---~v~~vd~-------~d~e~l~~ai~~~------tklV~l~sp~NPtG~v~di~~I~~la~~~gi~ 181 (431)
T PRK08248 118 NLFAHTLPKLGI---TVKFVDP-------SDPENFEAAITDK------TKALFAETIGNPKGDVLDIEAVAAIAHEHGIP 181 (431)
T ss_pred HHHHHHHHhCCE---EEEEECC-------CCHHHHHHhcCCC------CeEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 345667788 8888874 3889999888653 35788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCchH-HHH------HhcCCcccccccccc
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRNT-LIQ------SLSTNPEFLKNKASQ 337 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~~-~~~------~~~~~~~yl~~~~~~ 337 (486)
++||++++......| .. -++|.++.+.|||+++|.. .|.+++..... +.. .....+.|-......
T Consensus 182 vIvD~t~a~~~~~~p-l~------~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (431)
T PRK08248 182 LIVDNTFASPYLLRP-IE------HGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGLTEPDPSYHGLVYTD 254 (431)
T ss_pred EEEeCCCCccccCCh-hH------cCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccccCCccccccchhhh
Confidence 999999975433222 11 1799999999999998853 66666643321 100 000000010000000
Q ss_pred cCCcc-----CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC----------
Q 041829 338 ANMVV-----DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR---------- 402 (486)
Q Consensus 338 ~~~~~-----~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~---------- 402 (486)
..+.. ....+....|....+..+|..++ |.+.+..+++++.++|..+.+.|+++|+++-+.-|
T Consensus 255 ~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~ 332 (431)
T PRK08248 255 AVGEAAYITKARVQLLRDLGAALSPFNSFLLLQ--GLETLHLRMERHSENALAVAKFLEEHEAVEWVSYPGLPSHPSYEL 332 (431)
T ss_pred hhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHH
Confidence 00000 00000112234455567776665 67788899999999999999999999998644321
Q ss_pred --------CceEEEEEecCCCCCcccchHHHHHHHHHHHcc------CcE---EEEeee-----E-------CC--EeEE
Q 041829 403 --------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST------GKI---FISHTV-----L-------SG--KYIL 451 (486)
Q Consensus 403 --------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~~~~-----~-------~~--~~~l 451 (486)
..++++|.+... .+...++.+.|.-- |.. ...+.. + .| .+.+
T Consensus 333 ~~~~~~~g~gg~~sf~l~~~-------~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 405 (431)
T PRK08248 333 AKKYLPKGQGAILTFGIKGG-------VEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGVTPGLV 405 (431)
T ss_pred HHHhCcCCCceEEEEEecCC-------HHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCCCCCeE
Confidence 134888888531 22234566654321 110 111110 0 11 3579
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
|+|+ --||++.+++.|.+..+.+
T Consensus 406 Rlsv-----GlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 406 RLSV-----GTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred EEEe-----ccCCHHHHHHHHHHHHHhh
Confidence 9999 3456777777777766543
No 172
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=8.9e-18 Score=168.29 Aligned_cols=220 Identities=21% Similarity=0.209 Sum_probs=157.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH-
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL- 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (486)
..|...++|+. ++++.|.+. .+++++|++++..++.+... +++.|+++...|...
T Consensus 58 ~~p~~~~Le~~----lA~l~g~~~---------~v~~~sG~~Ai~~~l~all~-----------pGD~Vvv~~p~Y~~t~ 113 (405)
T PRK08776 58 GNPTRDLLGEA----LAELEGGAG---------GVITATGMGAINLVLNALLQ-----------PGDTLVVPHDAYGGSW 113 (405)
T ss_pred CChHHHHHHHH----HHHHhCCCc---------eEEEcCHHHHHHHHHHHHhC-----------CCCEEEEccCCchHHH
Confidence 44556677766 888888643 68888888887666654422 677788888888763
Q ss_pred ---HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 189 ---QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 189 ---~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
...+...|+ +++.++. .|+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 114 ~~~~~~~~~~g~---~v~~v~~-------~d~~~l~~~i~~~------tklV~l~~P~NPtG~v~dl~~I~~la~~~gi~ 177 (405)
T PRK08776 114 RLFNALAKKGHF---ALITADL-------TDPRSLADALAQS------PKLVLIETPSNPLLRITDLRFVIEAAHKVGAL 177 (405)
T ss_pred HHHHHHHHhcCc---EEEEECC-------CCHHHHHHhcCcC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCCE
Confidence 333444566 6666653 4889999888643 45888999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+......+ . . -++|.++.++||++++|.+ .|+++.++++...+. .. ...
T Consensus 178 vIvD~a~a~~~~~~p-l----~--~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l-~~----~~~---------- 235 (405)
T PRK08776 178 TVVDNTFLSPALQKP-L----E--FGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQL-VW----WAN---------- 235 (405)
T ss_pred EEEECCCcccccCCc-c----c--ccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHH-HH----HHH----------
Confidence 999999976432111 1 1 2789999999999998864 577777665533321 11 000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
..+-....+..|+.++ |.+.++.++++..+++..+.+.|+++|.++-+
T Consensus 236 ------~~g~~~s~~~a~l~~~--gl~tl~~r~~~~~~na~~la~~L~~~p~v~~V 283 (405)
T PRK08776 236 ------ALGLTGSPFDAFLTLR--GLRTLDARLRVHQENADAIAALLDGHAAVNQV 283 (405)
T ss_pred ------hcCCCCCHHHHHHHHh--hhCcHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 0111234566776664 66788999999999999999999999988643
No 173
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.82 E-value=2.9e-17 Score=162.80 Aligned_cols=286 Identities=14% Similarity=0.107 Sum_probs=191.8
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...++++. ++++++.+++ ..++|+|+++++..++.+... +++.|+++...+..+...+
T Consensus 60 ~~~~lr~~----ia~~~~~~~~-------~i~it~G~~~~l~~~~~~l~~-----------~gd~Vlv~~p~y~~~~~~~ 117 (351)
T PRK14807 60 TAEKLREE----LARYCSVVPT-------NIFVGNGSDEIIHLIMLAFIN-----------KGDVVIYPHPSFAMYSVYS 117 (351)
T ss_pred cHHHHHHH----HHHHhCCCcc-------cEEEecCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHHH
Confidence 34556655 6677787654 588999888887666654322 6777888888888888888
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
+..|+ +++.+|+++ +|.+|++++++++++. ++.+|+++.++|+||.+-+.+++.++|++++.++++|++|
T Consensus 118 ~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y 187 (351)
T PRK14807 118 KIAGA---VEIPVKLKE--DYTYDVGSFIKVIEKY-----QPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAY 187 (351)
T ss_pred HHcCC---eEEEeecCC--CCCCCHHHHHHHhhcc-----CCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcc
Confidence 99999 999999874 3689999999988642 1457788899999999999999999999989999999999
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCCCCccC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
+.+. ........... .-..+..++.|.++.| ..+|+++. +++... .+.. ...+
T Consensus 188 ~~~~--~~~~~~~~~~~-~~vi~~~S~SK~~~~~GlRiG~~v~-~~~~~~-~~~~~~~~~-------------------- 242 (351)
T PRK14807 188 FEFY--GNTIVDVINEF-ENLIVLRTLSKAFGLAGLRVGYAVA-NENILK-YLNLVKSPY-------------------- 242 (351)
T ss_pred hhhc--ccchHHHhhhC-CCEEEEecchHhcccchhceeeeec-CHHHHH-HHHHccCCC--------------------
Confidence 7542 11111111111 1125566788999744 55788765 333332 2221 1110
Q ss_pred CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLD 430 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~ 430 (486)
....+...++...+....+++.+++..+.++++.+.|++.+++++. ++..+.+.+++.. ..++.+
T Consensus 243 ---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~~~g~~~~-~~~~~~~~i~~~~-----------~~~~~~ 307 (351)
T PRK14807 243 ---NINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSKIPGIKVY-PSKTNFILVKFKD-----------ADYVYQ 307 (351)
T ss_pred ---CcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-cCCccEEEEEcCC-----------HHHHHH
Confidence 0112333334444433456777777788888899999888888764 5555555555531 145677
Q ss_pred HHHccCcEEEEeee--ECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 431 DINSTGKIFISHTV--LSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 431 ~l~~~g~~~~~~~~--~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.|.+.| +.+.+.. .....++|++++ +.++.++++++|+++
T Consensus 308 ~l~~~g-V~v~~~~~~~~~~~~iRis~~----~~~~~~~l~~~l~~~ 349 (351)
T PRK14807 308 GLLERG-ILVRDFSKVEGLEGALRITVS----SCEANDYLINGLKEL 349 (351)
T ss_pred HHHHCC-EEEEECCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHh
Confidence 777777 4444332 123468999983 578899999999765
No 174
>PLN02509 cystathionine beta-lyase
Probab=99.82 E-value=4e-18 Score=172.06 Aligned_cols=216 Identities=19% Similarity=0.221 Sum_probs=153.6
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH----H
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA----C 192 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a----~ 192 (486)
..+++.++++++.|.+. .+++++|+.++ .++..... +++.|+++...|.+.... +
T Consensus 134 t~~aLE~~lA~leg~e~---------ai~~~SG~aAi-~~il~ll~-----------~GD~VI~~~~~y~~t~~ll~~~l 192 (464)
T PLN02509 134 TRDALESLLAKLDKADR---------AFCFTSGMAAL-SAVTHLIK-----------NGEEIVAGDDVYGGSDRLLSQVV 192 (464)
T ss_pred HHHHHHHHHHHHhCCCE---------EEEeCcHHHHH-HHHHHHhC-----------CCCEEEEcCCchhhHHHHHHHHH
Confidence 34444555899887543 57777777554 33333211 678888999998876643 4
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
...|+ +++.++. .|+++++++++++ +.+|+++.++|++|.+.|+++|+++|+++|++++||+||
T Consensus 193 ~~~G~---~v~~vd~-------~d~e~l~~ai~~~------TklV~lesPsNPtG~i~Dl~~I~~lAk~~g~~lIVD~A~ 256 (464)
T PLN02509 193 PRSGV---VVKRVNT-------TNLDEVAAAIGPQ------TKLVWLESPTNPRQQISDIRKIAEMAHAQGALVLVDNSI 256 (464)
T ss_pred HHCCe---EEEEeCC-------CCHHHHHHhCCcC------CeEEEEECCCCCCCCHHHHHHHHHHHHHcCCEEEEECCc
Confidence 45677 7777653 3788898888653 358999999999999999999999999999999999999
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
+.+....+ . -.++|.++++++||++++.+ +|+++++++....+.. .+.. .
T Consensus 257 a~~~~~~p-l------~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~-----~~~~----------------~ 308 (464)
T PLN02509 257 MSPVLSRP-L------ELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVY-----FLQN----------------S 308 (464)
T ss_pred cccccCCh-h------hcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHH-----HHHH----------------h
Confidence 76654221 1 12799999999999998876 7778777654322111 0000 0
Q ss_pred CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 351 LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.+.......+|..++ |.+.+..++++..++|+++.+.|+++|.++-+
T Consensus 309 ~g~~l~p~~A~l~lr--~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V 355 (464)
T PLN02509 309 EGSGLAPFDCWLCLR--GIKTMALRIEKQQENARKIAMYLSSHPRVKKV 355 (464)
T ss_pred cCCCcCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHhcCCCccEE
Confidence 111234456676665 55778899999999999999999999998643
No 175
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=4.7e-18 Score=169.92 Aligned_cols=291 Identities=14% Similarity=0.098 Sum_probs=198.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. ++++.|.+. +++++||++|+..++.+... +++.|+++...|.+..
T Consensus 63 ~~pt~~~Le~~----lA~l~g~~~---------~l~~~sgt~Ai~~~l~al~~-----------~GD~Vl~~~~~y~~~~ 118 (394)
T PRK07050 63 ATPTSLALAQR----LAEIEGGRH---------ALLQPSGLAAISLVYFGLVK-----------AGDDVLIPDNAYGPNR 118 (394)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEeccHHHHHHHHHHHHhC-----------CCCEEEEecCCcccHH
Confidence 55677778887 899998643 89999999999988876532 7888999998988755
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+..+|+ +++.++.. +.+++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~Gi---~v~~vd~~-------~~~~l~~~i~~~------tklV~le~p~Np~~~~~di~~I~~ia~~~gi~ 182 (394)
T PRK07050 119 DHGEWLARDFGI---TVRFYDPL-------IGAGIADLIQPN------TRLIWLEAPGSVTMEVPDVPAITAAARARGVV 182 (394)
T ss_pred HHHHHHHHhcCe---EEEEECCC-------CHHHHHHhcCCC------CeEEEEECCCCCCccHhhHHHHHHHHHHcCCE
Confidence 3 5566788 88877632 446788777543 45889999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|+||+.+...-+ .. .++|.++.+.+|++++..+ .|++++++++...+.... ..+
T Consensus 183 livD~a~a~~~~~~~-l~------~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~-~~~------------- 241 (394)
T PRK07050 183 TAIDNTYSAGLAFKP-FE------HGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLA-RMR------------- 241 (394)
T ss_pred EEEECCcccccccCH-HH------cCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHH-HHh-------------
Confidence 999999987654322 11 1689999999999987654 677777776543322110 000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
.|-...+...|.+++ |.+.+..++++..++|..+.+.|+++|+++.+..| ..++
T Consensus 242 -------~G~~~~~~~a~l~lr--~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~ 312 (394)
T PRK07050 242 -------LGIGVSADDCSLVLR--GLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGL 312 (394)
T ss_pred -------cCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceE
Confidence 111223455676665 55677789999999999999999999987654321 1347
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccCcE--------EEEeee-----E----CCEeEEEEEecCCCCCHHHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKI--------FISHTV-----L----SGKYILRFAVGAPLTEWRHVNAAW 469 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~~~~-----~----~~~~~lRi~~~~~~~t~~di~~~~ 469 (486)
++|.+.... ..+...++.+.|..-+.. .+.+.. . ...+.+|+|+ --||++.++
T Consensus 313 ~s~~l~~~~-----~~~~~~~~~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~iR~sv-----GlE~~~dl~ 382 (394)
T PRK07050 313 FSVVFDERY-----SPAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTAKWPHRGTLVRLYI-----GLEDEADLI 382 (394)
T ss_pred EEEEECCCC-----CHHHHHHHHHcCCCCeeccccCCccceEeeCcccccchhhcCCCCCEEEEEe-----CcCCHHHHH
Confidence 778775321 123345666665543210 111110 0 0125799999 335677777
Q ss_pred HHHHHHHHHHH
Q 041829 470 EVMQDKASALL 480 (486)
Q Consensus 470 ~~l~~~~~~l~ 480 (486)
+.|.+..+..+
T Consensus 383 ~dl~~al~~~~ 393 (394)
T PRK07050 383 ADLEQALEAAL 393 (394)
T ss_pred HHHHHHHHHhh
Confidence 77777766543
No 176
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.82 E-value=1.4e-17 Score=167.85 Aligned_cols=325 Identities=13% Similarity=0.087 Sum_probs=204.1
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...++ ....|....+..++.+.+.+|+.+.+|++ .+. ....++|+|+++++..++.+..+
T Consensus 44 ~~~~~~~~~~~~~-~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~----~~~i~it~G~~~al~~~~~~l~~------ 112 (396)
T PRK09147 44 PAFIKDALAANLD-GLASYPTTAGLPALREAIAAWLERRYGLPALDP----ATQVLPVNGSREALFAFAQTVID------ 112 (396)
T ss_pred CHHHHHHHHHHhh-hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCc----cceEEECCChHHHHHHHHHHHcC------
Confidence 3445555555444 23456656677889999999999988865 220 01477889988888776665433
Q ss_pred CccCCC---CeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc
Q 041829 169 GKNSLE---KLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS 245 (486)
Q Consensus 169 ~~~~~~---~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~ 245 (486)
+ ++.|+++...+..+..+++.+|+ +++.||++++++|.+|+++|++++.+. +.+++++.++||
T Consensus 113 -----~~~~gd~vlv~~P~y~~~~~~~~~~g~---~~~~vp~~~~~~~~~d~~~l~~~~~~~------~k~i~l~nP~NP 178 (396)
T PRK09147 113 -----RDGPGPLVVCPNPFYQIYEGAALLAGA---EPYFLNCDPANNFAPDFDAVPAEVWAR------TQLLFVCSPGNP 178 (396)
T ss_pred -----CCCCCCEEEEcCCCccchHHHHHhcCC---EEEEeccCccccCccCHHHHHHHHhhc------cEEEEEcCCCCC
Confidence 4 67888999999889999999999 999999986556899999999887543 357778899999
Q ss_pred ccccC---ChHHHHHHHHHhCCEEEeeccccchhccCccch-hccc---CC--cCCC--ceeeecccccCCC-CcceEEE
Q 041829 246 STAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYR-QYID---GV--EEAD--SFNMNAHKWFLTN-FDCSALW 313 (486)
Q Consensus 246 tG~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~-~~~~---~~--~~aD--s~~~~~hK~l~~p-~~~g~l~ 313 (486)
||.+- .+++|+++|++|++|+++|.+|+.+........ ..+. .+ ...| .+..++.|.++.| ..+|+++
T Consensus 179 TG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~GlRiG~~~ 258 (396)
T PRK09147 179 TGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRSNVPGLRSGFVA 258 (396)
T ss_pred cCccCCHHHHHHHHHHHHHcCeEEEeeccccccccCCCCCCchhhhhccccCccccccEEEEeccccccCCccceeeeec
Confidence 99995 578888899999999999999987543211000 0010 01 0112 5567789965444 6688876
Q ss_pred EeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 314 VKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 314 ~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
.. +..+. .+.....+.. .....+...+++..+ ..+.+++..+...+..+.+.+.|++
T Consensus 259 ~~-~~l~~-~~~~~~~~~~--------------------~~~~~~~q~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~ 316 (396)
T PRK09147 259 GD-AALLK-KFLLYRTYHG--------------------CAMPPAVQAASIAAWNDEAHVRENRALYREKFDAVTPILAP 316 (396)
T ss_pred CC-HHHHH-HHHHHhhhcc--------------------cCCCHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 33332 2211111110 001112222222222 2345666677777778888888876
Q ss_pred CCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeE--------CCEeEEEEEecCCCCCHH
Q 041829 393 DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVL--------SGKYILRFAVGAPLTEWR 463 (486)
Q Consensus 393 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~--------~~~~~lRi~~~~~~~t~~ 463 (486)
. +.+..+.....+.+++. . + ..++.++|. +.|.....+..+ .+.+++|++++. +++
T Consensus 317 ~--~~~~~p~~g~f~~~~~~-~-------~--~~~~~~~ll~~~gv~v~pg~~f~~~~~~~~~~~~~iRi~~~~---~~~ 381 (396)
T PRK09147 317 V--LDVQLPDAGFYLWAKVP-G-------D--DTEFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALVA---PLA 381 (396)
T ss_pred h--cCCCCCCeeEEEEEECC-C-------C--HHHHHHHHHHhCCEEEeCCccccccccCCCCCCCeEEEEecC---CHH
Confidence 4 44433334444445543 1 1 145666665 456444333322 124699999942 578
Q ss_pred HHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKA 476 (486)
Q Consensus 464 di~~~~~~l~~~~ 476 (486)
++++.+++|.++.
T Consensus 382 ~l~~~l~rl~~~~ 394 (396)
T PRK09147 382 ECVEAAERIVDFC 394 (396)
T ss_pred HHHHHHHHHHHHh
Confidence 8998888887754
No 177
>PRK07683 aminotransferase A; Validated
Probab=99.82 E-value=1.8e-17 Score=166.46 Aligned_cols=328 Identities=11% Similarity=0.095 Sum_probs=211.9
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCc
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGK 170 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~ 170 (486)
..+.+.+...+......|...++..++++++.+|+.+.+|.+.+. ..+.++|+|+++|+..++.+...
T Consensus 44 ~~~~~a~~~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~----~~~I~~t~G~~~al~~~~~~l~~-------- 111 (387)
T PRK07683 44 SHVKEAAKRAITENYTSYTHNAGLLELRKAACNFVKDKYDLHYSP----ESEIIVTIGASEAIDIAFRTILE-------- 111 (387)
T ss_pred HHHHHHHHHHHhcCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEeCChHHHHHHHHHHhCC--------
Confidence 445566666555544566666778999999999998877764320 01589999999998877655432
Q ss_pred cCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 171 NSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 171 ~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
+++.|+++...+..+..+++.+|+ +++.+|.+.+ ++.+|++++++.+++. +.+|+++.++|+||.+-
T Consensus 112 ---~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~~~~~l~~~~~~~------~~~i~i~~p~NPtG~~~ 178 (387)
T PRK07683 112 ---PGTEVILPAPIYPGYEPIIRLCGA---KPVFIDTRST-GFRLTAEALENAITEK------TRCVVLPYPSNPTGVTL 178 (387)
T ss_pred ---CCCEEEEcCCCccchHHHHHHcCC---EEEEeecCcc-cCCCCHHHHHHhcCcC------ceEEEEeCCCCCCCcCC
Confidence 567888899888888889999999 9999998765 4788999999987643 35788899999999984
Q ss_pred ---ChHHHHHHHHHhCCEEEeeccccchhccCccchhccc--CCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHh
Q 041829 251 ---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYID--GVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSL 324 (486)
Q Consensus 251 ---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~--~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~ 324 (486)
++++|+++|+++|+++++|++|..+... +....... +...-..+..++.|.++.| .-+|+++... ..+.. +
T Consensus 179 s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~s~SK~~~~pGlRiG~i~~~~-~l~~~-~ 255 (387)
T PRK07683 179 SKEELQDIADVLKDKNIFVLSDEIYSELVYE-QPHTSIAHFPEMREKTIVINGLSKSHSMTGWRIGFLFAPS-YLAKH-I 255 (387)
T ss_pred CHHHHHHHHHHHHHcCeEEEEecccccceeC-CCcCChhhccCCcCCeEEEeeccccccCccceeEEEEcCH-HHHHH-H
Confidence 4889999999999999999999865432 11111111 1111235567789999855 4478877643 32222 2
Q ss_pred cCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHH--hChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 325 STNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRL--YGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 325 ~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~--~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.....|... +. ..+...++... .|...+++..++..++++++.+.|++. ++.+. +|
T Consensus 256 ~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~ 313 (387)
T PRK07683 256 LKVHQYNVT-----------------CA---SSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISM-GLDVE-KP 313 (387)
T ss_pred HHHHHhccC-----------------CC---ChHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-CC
Confidence 211112110 00 11122222222 244556667777788889999999886 67654 45
Q ss_pred CceEEEEEecCC-CCCcccchHHHHHHHHHH-HccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPP-HNDEDHGNKLNHKLLDDI-NSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 403 ~~~~v~f~~~~~-~~~~~~~~~~~~~l~~~l-~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
..+.+.+...+. . .+ ..++...+ .+.|..+.++..+. +..++||++ .. +++++.+.+++|.++.++
T Consensus 314 ~~~~~~~~~~~~~~-----~~--~~~~~~~ll~~~gI~v~pg~~f~~~~~~~~Ri~~-~~--~~~~~~~al~~l~~~l~~ 383 (387)
T PRK07683 314 TGAFYLFPSIGHFT-----MS--SFDFALDLVEEAGLAVVPGSAFSEYGEGYVRLSY-AY--SIETLKEGLDRLEAFLQQ 383 (387)
T ss_pred CeeEEEEEecccCC-----CC--HHHHHHHHHHhCCEEEcCchhhCCCCCCeEEEEe-cC--CHHHHHHHHHHHHHHHHh
Confidence 555554443221 1 11 13455444 44564433433332 246999999 33 688999999999887653
No 178
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.82 E-value=6.3e-18 Score=170.11 Aligned_cols=311 Identities=15% Similarity=0.165 Sum_probs=197.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|....
T Consensus 67 ~~p~~~~Le~~----lA~l~g~~~---------av~~sSG~aAi~~al~all~-----------~Gd~Vv~~~~~y~~t~ 122 (436)
T PRK07812 67 MNPTQDVVEQR----IAALEGGVA---------ALLLASGQAAETFAILNLAG-----------AGDHIVSSPRLYGGTY 122 (436)
T ss_pred CCchHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEeCCcchHHH
Confidence 46777788887 899999765 68888999998887765432 6778888888887655
Q ss_pred HH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
.. +...|+ +++.++ + ..|++++++++++. +.+|++..++|++|.+.|+++|+++||++|++
T Consensus 123 ~~~~~~l~~~Gi---~v~~vd-d-----~~d~e~l~~ai~~~------tklV~ie~~sNp~G~v~Dl~~I~~la~~~gi~ 187 (436)
T PRK07812 123 NLFHYTLPKLGI---EVSFVE-D-----PDDLDAWRAAVRPN------TKAFFAETISNPQIDVLDIPGVAEVAHEAGVP 187 (436)
T ss_pred HHHHHHhhcCeE---EEEEEC-C-----CCCHHHHHHhCCCC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 43 334566 777765 2 23899999888654 35889999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCch-HHHHH-----hcCCcccccccccc-
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRN-TLIQS-----LSTNPEFLKNKASQ- 337 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~-~~~~~-----~~~~~~yl~~~~~~- 337 (486)
++||++++......+ .. .++|.++.++||+++++.+ .|.+++.... .+... ....++|.......
T Consensus 188 liVD~t~a~~~~~~p-l~------~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (436)
T PRK07812 188 LIVDNTIATPYLIRP-LE------HGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAEL 260 (436)
T ss_pred EEEECCCcccccCCc-hh------cCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCcccccchhhhc
Confidence 999999976544322 11 2799999999999987643 4555554321 11100 01111221100000
Q ss_pred -cCCcc-CCC-CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC------------
Q 041829 338 -ANMVV-DYK-DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR------------ 402 (486)
Q Consensus 338 -~~~~~-~~~-~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~------------ 402 (486)
..... ... .+....|-......+|..++ |.+.+..++++..++|..+.+.|+++|+++-+.-|
T Consensus 261 ~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~r--gl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~ 338 (436)
T PRK07812 261 GPPAYALKARVQLLRDLGSAISPFNAFLIAQ--GLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSPWYERAK 338 (436)
T ss_pred chhHHHHHHHHHHHHhcCCCCCHHHHHHHhc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHH
Confidence 00000 000 00112333445566676554 77889999999999999999999999998644322
Q ss_pred ------CceEEEEEecCCCCCcccchHHHHHHHHHHHccCc------E---EEEeee-----E-------CC--EeEEEE
Q 041829 403 ------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK------I---FISHTV-----L-------SG--KYILRF 453 (486)
Q Consensus 403 ------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~------~---~~~~~~-----~-------~~--~~~lRi 453 (486)
..++++|.+... .+...++.+.|.--.. . ...+.. . .| .+.+|+
T Consensus 339 ~~~~~g~gg~~sf~l~~~-------~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRl 411 (436)
T PRK07812 339 RLAPKGTGAVLSFELAGG-------VEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRL 411 (436)
T ss_pred HhCcCCCceEEEEEecCC-------HHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEE
Confidence 135888888531 2223456665532110 0 111110 0 11 357999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 454 AVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 454 ~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
|+ --||++.+++.|.+..+...
T Consensus 412 Sv-----GlEd~~dli~dl~~Al~~~~ 433 (436)
T PRK07812 412 AV-----GIEGIDDILADLEAGFAAAK 433 (436)
T ss_pred Ee-----ccCCHHHHHHHHHHHHHhhh
Confidence 99 34567777887777766544
No 179
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=7.2e-18 Score=168.52 Aligned_cols=234 Identities=20% Similarity=0.175 Sum_probs=167.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. ++++++|++|+..++.+..+ +++.|+++...|.+..
T Consensus 59 ~~p~~~~Le~~----lA~~~g~~~---------~i~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~t~ 114 (388)
T PRK07811 59 GNPTRTALEEQ----LAALEGGAY---------GRAFSSGMAATDCLLRAVLR-----------PGDHIVIPNDAYGGTF 114 (388)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchHHH
Confidence 45777888888 899998765 46667788888887766533 6778888988888655
Q ss_pred HHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+.. .|+ +++.++. .|+++|+++++++ +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 115 ~~~~~~~~~~gi---~~~~~d~-------~d~e~l~~~i~~~------tklV~ie~p~NPtg~~~dl~~I~~la~~~gi~ 178 (388)
T PRK07811 115 RLIDKVFTRWGV---EYTPVDL-------SDLDAVRAAITPR------TKLIWVETPTNPLLSITDIAALAELAHDAGAK 178 (388)
T ss_pred HHHHHhCcCCCe---EEEEeCC-------CCHHHHHHhcCcC------CeEEEEECCCCCcceecCHHHHHHHHHHcCCE
Confidence 44332 355 5555542 4899999988654 35888999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|++|+.+....+ .. .++|.++.+++|++++|.+ .|+++++++....+ +. ++..
T Consensus 179 lIvD~a~a~~~~~~p-~~------~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~-~~----~~~~---------- 236 (388)
T PRK07811 179 VVVDNTFASPYLQQP-LA------LGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEA-FA----FLQN---------- 236 (388)
T ss_pred EEEECCCCccccCCc-hh------hCCcEEEecCceeecCCCCcEEEEEEECCHHHHHH-HH----HHHH----------
Confidence 999999986543221 11 1689999999999998764 57777776653322 11 1100
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..+.....+..|..++. .+.+..++++..+++..+.+.|+++|+++-+.-| ..++
T Consensus 237 ------~~g~~~s~~~a~l~~~~--L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~ 308 (388)
T PRK07811 237 ------GAGAVPGPFDAYLTLRG--LKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGM 308 (388)
T ss_pred ------hcCCCCCHHHHHHHHhc--cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCce
Confidence 01111233455665553 4567888999999999999999999998754322 1358
Q ss_pred EEEEecC
Q 041829 407 VCFRLLP 413 (486)
Q Consensus 407 v~f~~~~ 413 (486)
++|.+..
T Consensus 309 ~s~~~~~ 315 (388)
T PRK07811 309 VSVRLAG 315 (388)
T ss_pred EEEEeCC
Confidence 8998863
No 180
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.82 E-value=5.3e-18 Score=169.03 Aligned_cols=220 Identities=17% Similarity=0.153 Sum_probs=160.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
...|...++|+. +++++|.+. .++++||+.|+..++.+... +++.|+++...|.+.
T Consensus 50 ~~np~~~~lE~~----lA~l~g~~~---------~l~~~sG~~Ai~~~l~~ll~-----------~GD~Vlv~~~~y~~~ 105 (385)
T PRK08574 50 EENPTLRPLEEA----LAKLEGGVD---------ALAFNSGMAAISTLFFSLLK-----------AGDRVVLPMEAYGTT 105 (385)
T ss_pred CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCchhH
Confidence 356788888888 899998653 68888999998887765432 678899999999987
Q ss_pred HHHHHH---hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 189 QKACQI---GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 189 ~~a~~~---~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
...++. .|+ +++.++ +|+++|++++++. ++.+|++..++|++|.+-|+++|+++|+++|++
T Consensus 106 ~~~~~~~~~~g~---~v~~~~--------~d~~~l~~~i~~~-----~tklV~ie~p~NPtG~v~dl~~I~~la~~~gi~ 169 (385)
T PRK08574 106 LRLLKSLEKFGV---KVVLAY--------PSTEDIIEAIKEG-----RTKLVFIETMTNPTLKVIDVPEVAKAAKELGAI 169 (385)
T ss_pred HHHHHHhhccCc---EEEEEC--------CCHHHHHHhcCcc-----CceEEEEECCCCCCCEecCHHHHHHHHHHcCCE
Confidence 776644 355 555442 3678888888651 145788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|++|+.+....+ .. .++|.++.+.+|++++|.+ .|++++.++....+..... .+
T Consensus 170 livD~t~a~~~~~~~-l~------~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~-~~------------- 228 (385)
T PRK08574 170 LVVDNTFATPLLYRP-LR------HGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWR-RR------------- 228 (385)
T ss_pred EEEECCCCccccCCh-hh------hCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHH-Hh-------------
Confidence 999999976543221 11 2689999999999998864 4657776655333221110 00
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
.|.....+.+|.+++ |.+.+..++++..+++.++.+.|+++|.++-
T Consensus 229 -------~g~~~~p~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~ 274 (385)
T PRK08574 229 -------LGTIMQPFEAYLVLR--GLKTLEVRFERQCRNAMAIAEFLSEHPKVAE 274 (385)
T ss_pred -------cCCCCCHHHHHHHHc--ccCcHHHHHHHHHHHHHHHHHHHHcCCCcCE
Confidence 111223345565555 5567888999999999999999999998763
No 181
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.82 E-value=7.4e-18 Score=168.56 Aligned_cols=286 Identities=16% Similarity=0.190 Sum_probs=192.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. ++++.|.+. .+++++|+.++..++. ... +++.|+++...|.+..
T Consensus 52 ~~p~~~~le~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~-~l~-----------~Gd~Vlv~~~~y~~~~ 106 (390)
T PRK08064 52 GNPTREALEDI----IAELEGGTK---------GFAFASGMAAISTAFL-LLS-----------KGDHVLISEDVYGGTY 106 (390)
T ss_pred CChhHHHHHHH----HHHHhCCCC---------eEEECCHHHHHHHHHH-HhC-----------CCCEEEEccCccchHH
Confidence 56777888887 899999764 4677778877655553 221 5677888888886433
Q ss_pred ----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.++..|+ +++.++.+ |++++++++++++ .+|+++.++|++|.+.|+++|.++|+++|++
T Consensus 107 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~t------klV~l~~p~NptG~~~dl~~I~~la~~~g~~ 170 (390)
T PRK08064 107 RMITEVLSRFGI---EHTFVDMT-------NLEEVAQNIKPNT------KLFYVETPSNPLLKVTDIRGVVKLAKAIGCL 170 (390)
T ss_pred HHHHHHHHHcCC---EEEEECCC-------CHHHHHHhcCCCc------eEEEEECCCCCCcEeccHHHHHHHHHHcCCE
Confidence 45566788 88888753 7888888886543 5899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||+||+.+....+ . . -++|.++.++||++++|.+ .|++++++++...+......
T Consensus 171 vvvD~a~~~~~~~~~-~-~-----~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~--------------- 228 (390)
T PRK08064 171 TFVDNTFLTPLLQKP-L-D-----LGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQN--------------- 228 (390)
T ss_pred EEEECCCCcccccCc-h-h-----hCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHH---------------
Confidence 999999976543222 1 1 1689999999999998876 58888777554332211111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeE-EecC----------------CCceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFE-VVTP----------------RIFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~-~~~~----------------~~~~~ 406 (486)
..+....+...|..+ .|.+.+..++++..+++..+.+.|+++|.+. +..+ ...++
T Consensus 229 ------~~g~~~~~~~a~l~~--~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~ 300 (390)
T PRK08064 229 ------SFGAVLGVQDCWLVL--RGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAV 300 (390)
T ss_pred ------hcCCCCCHHHHHHHH--cccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceE
Confidence 011122334566544 4666678899999999999999999998764 2221 12358
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHc------cCcE---EEEee-----eE-------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINS------TGKI---FISHT-----VL-------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~---~~~~~-----~~-------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.. .+...++.+.+.- -|.. ...+. .. .| .+.+|+|+ .....++
T Consensus 301 ~sf~~~~--------~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~Sv-Gle~~~d 371 (390)
T PRK08064 301 LSFTLQS--------EEAVRQFVSHVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSV-GLENVDD 371 (390)
T ss_pred EEEEECC--------HHHHHHHHHhCCcceEcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEe-ccCCHHH
Confidence 8888852 1223445554321 0100 00000 00 11 35899999 6777777
Q ss_pred HHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDK 475 (486)
Q Consensus 464 di~~~~~~l~~~ 475 (486)
.|+.+.++|+++
T Consensus 372 li~dl~~Al~~~ 383 (390)
T PRK08064 372 LIADFEQALSYV 383 (390)
T ss_pred HHHHHHHHHHhc
Confidence 788887777664
No 182
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=99.82 E-value=4.6e-18 Score=168.71 Aligned_cols=285 Identities=15% Similarity=0.160 Sum_probs=191.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|++ ++++.|.+. .++++||+.|+..++.+... +++.|++++..+....
T Consensus 48 gnPt~~~lE~~----lA~l~g~~~---------~~~~~sG~~Ai~~al~all~-----------~GD~Vl~~~~~y~~t~ 103 (377)
T TIGR01324 48 GTLTHFALQDA----MCELEGGAG---------CYLYPSGLAAVTNSILAFVK-----------AGDHVLMVDSAYEPTR 103 (377)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEcCCCcHHHH
Confidence 45778889998 888888653 78999999998888765432 6778888888876655
Q ss_pred HH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
.. +..+|+ ++..++.. +.+.|++++++. +.+|+++.++|++|.+.||++|+++|+++|++
T Consensus 104 ~~~~~~~~~~gi---~v~~~d~~-------~~e~l~~~i~~~------tklV~lesp~Np~g~~~dl~~I~~la~~~g~~ 167 (377)
T TIGR01324 104 YFCDIVLKRMGV---DITYYDPL-------IGEDIATLIQPN------TKVLFLEAPSSITFEIQDIPAIAKAARNPGIV 167 (377)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCCC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 43 345677 77666432 237788877654 45899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+...-+ .. .++|.++.+.|||++++.+ .|+++.+ ++.+.+... ..++
T Consensus 168 livD~t~a~g~~~~p-l~------~gaDivv~S~tK~l~G~~d~~gG~v~~~-~~~~~~l~~--~~~~------------ 225 (377)
T TIGR01324 168 IMIDNTWAAGLLFKP-LE------HGVDISIQAGTKYLVGHSDIMIGTVVAN-ARTWDQLRE--HSYL------------ 225 (377)
T ss_pred EEEECCCccccccCc-cc------cCceEEEecCceeccCCCCceEEEEEeC-HHHHHHHHH--HHHH------------
Confidence 999999987654322 11 2799999999999998864 4655554 333322110 0111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
.|....+..+|..++ |.+.+..++++..++|..+.+.|+++|.++-+.-| ..++
T Consensus 226 -------~G~~l~p~~a~~~~r--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~ 296 (377)
T TIGR01324 226 -------MGQMVDADDAYTTLR--GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGL 296 (377)
T ss_pred -------hCCCCCHHHHHHHHh--hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCce
Confidence 122234456777766 55677788999999999999999999988533211 2468
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccCcE--------EEE-ee--e---------ECCEeEEEEEecCCCCCHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKI--------FIS-HT--V---------LSGKYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~--------~~~-~~--~---------~~~~~~lRi~~~~~~~t~~di~ 466 (486)
++|++...+ .+...++.+.|..-+.. .+. +. . ..+ ..+|+|+ . -||.+
T Consensus 297 ~s~~l~~~~------~~~~~~~~~~l~~~~~~~slG~~~sl~~~~~~~~~~~~~~~~~~~~-~liR~sv-G----lE~~~ 364 (377)
T TIGR01324 297 FSFVLQRLT------QKQVHAFLDHLQLFGLGYSWGGYESLALCNQPELGHRPNIKRNLEG-PLIRVHI-G----LENVD 364 (377)
T ss_pred EEEEECCCC------HHHHHHHHHhCCcceEeccCCCccceeecCCCCCCHHHHHhccCCC-CEEEEEe-C----CCCHH
Confidence 899986311 22334666665432211 111 00 0 012 4799999 3 34667
Q ss_pred HHHHHHHHHHH
Q 041829 467 AAWEVMQDKAS 477 (486)
Q Consensus 467 ~~~~~l~~~~~ 477 (486)
.+++.|.+..+
T Consensus 365 dl~~dl~~al~ 375 (377)
T TIGR01324 365 DLKADLKAGFE 375 (377)
T ss_pred HHHHHHHHHHh
Confidence 77777766554
No 183
>PLN02242 methionine gamma-lyase
Probab=99.81 E-value=1.2e-17 Score=167.84 Aligned_cols=248 Identities=16% Similarity=0.179 Sum_probs=171.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. +++++|.+. .++++||++|+..++.+... +++.|+++...+....
T Consensus 74 ~~Pt~~~LE~~----lA~l~g~~~---------~l~~~sG~~Ai~~al~al~~-----------~GD~Vl~~~~~Y~~~~ 129 (418)
T PLN02242 74 FNPTVLNLGRQ----MAALEGTEA---------AYCTASGMSAISSVLLQLCS-----------SGGHVVASNTLYGGTH 129 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCcHHHHH
Confidence 46788888888 899999865 67899999999888876543 6778888888876665
Q ss_pred HHH-----HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 190 KAC-----QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 190 ~a~-----~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
..+ +..|+ +++.++. .|+++|++++++. ++.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 130 ~~~~~~~~~~~G~---~~~~~d~-------~d~e~l~~~i~~~-----~tklV~lesp~NPtG~v~dl~~I~~la~~~gi 194 (418)
T PLN02242 130 ALLAHFLPRKCNI---TTTFVDI-------TDLEAVKKAVVPG-----KTKVLYFESISNPTLTVADIPELARIAHEKGV 194 (418)
T ss_pred HHHHHhhhhccCc---eEEEcCC-------CCHHHHHHhcCcC-----CCEEEEEecCCCCCCcccCHHHHHHHHHHhCC
Confidence 544 34566 6655543 3899999988652 14588899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
+++||.+|+.+. ..+ .. + ++|+++.+++|+++++.. +|+++ .+++.+...........
T Consensus 195 ~livDea~~~~~-~~~--~~----~-g~divv~S~SK~l~g~g~~~gG~iv-~~~~li~~l~~~~~~~~----------- 254 (418)
T PLN02242 195 TVVVDNTFAPMV-LSP--AR----L-GADVVVHSISKFISGGADIIAGAVC-GPAELVNSMMDLHHGAL----------- 254 (418)
T ss_pred EEEEECCCCccC-CCH--HH----c-CCcEEEEeCccccCCCCCceEEEEE-cCHHHHHHHHHHhhhhh-----------
Confidence 999999996432 211 11 1 589999999999987754 35555 44443332211111000
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-------------------C
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-------------------I 403 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-------------------~ 403 (486)
...+.......+|..+ .+...+..++++..++++++.+.|+++ ++++..|. .
T Consensus 255 ------~~~g~~~~~~~A~l~~--~~l~tl~~r~~~~~~~a~~la~~L~~~-~~~V~yP~l~~~p~~~~~~~~~~~~~g~ 325 (418)
T PLN02242 255 ------MLLGPTMNPKVAFELS--ERLPHLSLRMKEHCRRAMEYAKRMKEL-GLKVIYPGLEDHPQHALLKSMANKGYGF 325 (418)
T ss_pred ------hccCCCCCHHHHHHHH--cCCCcHHHHHHHHHHHHHHHHHHHHhC-CCEEECCCCCCCccHHHHHHhcccCCCc
Confidence 0012223334555544 455677788899999999999999998 57776431 2
Q ss_pred ceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 404 FSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 404 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
.++++|.+.. .+...++++.+.
T Consensus 326 g~~~sf~l~~--------~~~~~~f~~~l~ 347 (418)
T PLN02242 326 GGLLCLDMDT--------EERANRLMRYLQ 347 (418)
T ss_pred eeEEEEEECC--------HHHHHHHHHHhh
Confidence 3578888842 233456666664
No 184
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.81 E-value=2.5e-17 Score=165.60 Aligned_cols=325 Identities=11% Similarity=0.068 Sum_probs=204.4
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+... ...|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~ii~t~G~~~~i~~~~~~~~~------ 115 (385)
T PRK09276 46 PDHIIEAMCKAVEDPENHQYPSYEGMLEFRKAVADWYKRRFGVELDP----ETEVISLIGSKEGIAHIPLAFVN------ 115 (385)
T ss_pred CHHHHHHHHHHHhCCCCCCCCCCCCcHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC------
Confidence 344555565555322 2345444456889999999999888864321 01367778888887776654432
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|++++.++..+...++..|+ +++.+|++.+.++.+|++++++++.+. +.+|+++.++|+||.
T Consensus 116 -----~gd~Vl~~~P~y~~~~~~~~~~g~---~~~~v~~~~~~g~~~d~~~l~~~~~~~------~~~v~l~~p~NPtG~ 181 (385)
T PRK09276 116 -----PGDVVLVPDPGYPVYKIGTIFAGG---EPYFMPLKEENGFLPDLDAIPEDVAKK------AKLMFINYPNNPTGA 181 (385)
T ss_pred -----CCCEEEEcCCCCcChHHHHHHcCC---EEEEEecCCCCCCcCCHHHHHHhcccc------ceEEEEeCCCCCCCC
Confidence 677899999999999999999999 999999975544789999998887543 457888889999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcc--cCCcCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYI--DGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~--~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
+-+ +++|+++|+++|+++++|.+|+.+........... .....-.....++.|.++.| .-+|+++. ++..+.
T Consensus 182 ~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~g~~GlRiG~~i~-~~~l~~- 259 (385)
T PRK09276 182 VADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVG-NADLIA- 259 (385)
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCCCCChhccCCCcCCEEEEecchhhcCCcchhheeeeC-CHHHHH-
Confidence 966 68889999999999999999976543111111111 11111234456788988654 33788764 333332
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
.+.....++.. + ...+...++...+ ....+++..++..++++++.+.|++. ++++..
T Consensus 260 ~~~~~~~~~~~-----------------~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~-~~~~~~ 318 (385)
T PRK09276 260 GLGKVKSNVDS-----------------G---VFQAIQEAGIAALNGPQEVVEELRKIYQERRDILVEGLRKL-GLEVEP 318 (385)
T ss_pred HHHHHHhhccC-----------------C---CCHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhC-CCcccC
Confidence 22111111100 0 0111222222222 24556777777888899999999987 787653
Q ss_pred CCCceE-EEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 401 PRIFSL-VCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 401 ~~~~~~-v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
|..++ +++++.+ . . ...++.++|.+ .| +.+.+. .+. +..++|+++ . .+++++...++.|.+
T Consensus 319 -~~~~~~~~v~~~~-~-----~--~~~~l~~~ll~~~g-i~v~~g~~f~~~~~~~~Ris~-~--~~~~~l~~~l~~l~~ 384 (385)
T PRK09276 319 -PKATFYVWAPVPK-G-----Y--TSAEFATLLLDKAG-VVVTPGNGFGEYGEGYFRIAL-T--VPDERIEEAVERIKK 384 (385)
T ss_pred -CCcceEEEEECCC-C-----C--CHHHHHHHHHHhCC-EEECCchhhCCCCCCeEEEEe-C--CCHHHHHHHHHHHhh
Confidence 44444 4555532 1 1 12456677664 56 444443 332 246999999 3 367777777777653
No 185
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.81 E-value=2e-17 Score=166.34 Aligned_cols=328 Identities=11% Similarity=0.043 Sum_probs=207.6
Q ss_pred HHHHHHHHHhcCc-CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 91 GFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
..+.+.+...+.. ....|...++..++.+++.+|+.+..|.+.+ .. +.++|+|+++++..++.+..+
T Consensus 46 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~~I~it~Gs~~al~~~~~~l~~------ 114 (388)
T PRK07366 46 AHALEAIAQSLHDPSTHGYLLFHGTLDFREAAAQWYEQRFGLAVD-----PETEVLPLIGSQEGTAHLPLAVLN------ 114 (388)
T ss_pred HHHHHHHHHHHhCcccCCCCCCCCCHHHHHHHHHHHHHhhCCcCC-----CcCeEEECCCcHHHHHHHHHHhCC------
Confidence 3344444444432 2344655567788999999999988886432 12 377888888887776654333
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|++...+++.+...++..|+ +++.+|+++++.+.+|++++++++.+. +.+|+++.++||||.
T Consensus 115 -----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NPTG~ 180 (388)
T PRK07366 115 -----PGDFALLLDPGYPSHAGGVYLAGG---QIYPMPLRAENDFLPVFADIPTEVLAQ------ARLMVLSYPHNPTTA 180 (388)
T ss_pred -----CCCEEEEcCCCCcchHHHHHhcCC---EEEEEECCCccCCCCCHHHHHHhhccc------ceEEEEeCCCCCCCc
Confidence 678888999999999999999999 999999986656789999998876542 357788889999999
Q ss_pred cCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC--ceeeecccccCCC-CcceEEEEeCchHHH
Q 041829 249 VDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD--SFNMNAHKWFLTN-FDCSALWVKDRNTLI 321 (486)
Q Consensus 249 id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~ 321 (486)
+-+ +++|+++|+++|+|+++|.+|+-+..........+..+.. -+ .++.++.|.++.| .-+|+++. ++..+.
T Consensus 181 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~~g~~GlRiG~~v~-~~~li~ 259 (388)
T PRK07366 181 IAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTLSKSYNMGGFRIGFAIG-NAQLIQ 259 (388)
T ss_pred cCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCCCCCChhhCCCCcccEEEEeecccccCCcchhheehcC-CHHHHH
Confidence 955 6678889999999999999997654321110111111211 12 3456889999654 55888764 443333
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
........+-. +. .......++..+ ..+.+++..++..+..+++.+.|+++ ++...
T Consensus 260 ~l~~~~~~~~~-------------------~~--~~~~~~~a~~~l~~~~~~l~~~~~~~~~~r~~l~~~L~~~-~~~~~ 317 (388)
T PRK07366 260 ALRQVKAVVDF-------------------NQ--YRGILNGAIAALTGPQATVQQTVQIFRQRRDAFINALHQI-GWPVP 317 (388)
T ss_pred HHHHHHhhccc-------------------CC--CHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCccc
Confidence 22111111100 00 000111122222 24567778888888899999999987 67654
Q ss_pred cCCCceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 400 TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 400 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+.....+.+++++.- +....++.+.+. +.|.....+..+. +.+++|+++ . .+++++++.+++|.++
T Consensus 318 ~p~~g~f~~~~~~~~~------~~~~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~~-~--~~~~~l~~~l~rl~~~ 387 (388)
T PRK07366 318 LPEATMYVWAKLPEPW------QGNSVEFCTQLVAQTGVAASPGSGFGKSGEGYVRFAL-V--HDPDILEEAVERIAAF 387 (388)
T ss_pred CCCeeEEEEEECCccc------CCCHHHHHHHHHHhCCEEEeCchHhCcCCCCeEEEEe-c--CCHHHHHHHHHHHHHh
Confidence 3444445555554210 001245666664 4564444333333 246999999 3 2688999999888764
No 186
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.81 E-value=2.6e-17 Score=163.59 Aligned_cols=284 Identities=13% Similarity=0.079 Sum_probs=189.6
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCC
Q 041829 121 VLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQ 200 (486)
Q Consensus 121 ~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~ 200 (486)
+++.++++++.+++ +.++|+|+++++..++.+..+ +++.|++++..|..+...++..|+
T Consensus 65 lr~aia~~~~~~~~-------~I~it~G~~~al~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 123 (353)
T PRK05387 65 LRQAIAAYYGLDPE-------QVFVGNGSDEVLAHAFLAFFN-----------HDRPLLFPDITYSFYPVYAGLYGI--- 123 (353)
T ss_pred HHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEeCCCHHHHHHHHHHcCC---
Confidence 44447777887665 699999999998887765543 677898999999888888999999
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh-CCEEEeeccccchhccC
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN-GMWFHVDAAYAGSACIC 279 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~-g~~lhvD~A~g~~~~~~ 279 (486)
+++.+|.++ +|.+|+++|++ .+ .+|+++.++|+||.+-|.+++.++++.+ ++++++|.+|..+..
T Consensus 124 ~~~~v~~~~--~~~~d~~~l~~----~~------~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~-- 189 (353)
T PRK05387 124 PYEEIPLDD--DFSIDVEDYLR----PN------GGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGG-- 189 (353)
T ss_pred EEEEeecCC--CCCCCHHHHHh----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCC--
Confidence 999999874 36899999863 11 3578889999999999999999999886 999999999964321
Q ss_pred ccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcH
Q 041829 280 PEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSL 358 (486)
Q Consensus 280 ~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l 358 (486)
.......... .-..+..++.|.++.| ..+|+++. +++.+. .+........ .+ ....+
T Consensus 190 ~~~~~~~~~~-~~~i~~~S~SK~~~~~GlR~G~~~~-~~~~~~-~l~~~~~~~~-------------~~------~~~~~ 247 (353)
T PRK05387 190 ESAIPLIDRY-PNLLVVQTFSKSRSLAGLRVGFAIG-HPELIE-ALNRVKNSFN-------------SY------PLDRL 247 (353)
T ss_pred cchHHHHhhC-CCEEEEEehhHhhcchhhhceeeec-CHHHHH-HHHHhhccCC-------------CC------CcCHH
Confidence 1111111111 2246777899988755 45788775 333332 2211100000 00 01222
Q ss_pred HHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCc
Q 041829 359 KLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK 437 (486)
Q Consensus 359 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 437 (486)
..+++...+. .+.+++..++..++++++.+.|+++ ++++. ++..+++.++... .+ ..++.+.|.++|.
T Consensus 248 ~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~-------~~--~~~~~~~l~~~gi 316 (353)
T PRK05387 248 AQAGAIAAIEDEAYFEETRAKVIATRERLVEELEAL-GFEVL-PSKANFVFARHPS-------HD--AAELAAKLRERGI 316 (353)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeEC-CCcCcEEEEECCC-------CC--HHHHHHHHHHCCE
Confidence 3333333332 3456777888888999999999998 78764 4555555555432 11 2467777877774
Q ss_pred EEEEeee-ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 438 IFISHTV-LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 438 ~~~~~~~-~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+.... ....+++|+++ + +.+++++++++|+++..
T Consensus 317 -~v~~~~~~~~~~~iRis~-~---~~~~~~~~~~~L~~~~~ 352 (353)
T PRK05387 317 -IVRHFNKPRIDQFLRITI-G---TDEEMEALVDALKEILA 352 (353)
T ss_pred -EEEECCCCCCCCeEEEEe-C---CHHHHHHHHHHHHHHhh
Confidence 443321 12346899999 3 57999999999988653
No 187
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.81 E-value=1.4e-17 Score=173.05 Aligned_cols=302 Identities=15% Similarity=0.113 Sum_probs=197.2
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH-HHHhCCCCCC
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA-CQIGGIHPQN 201 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~g~g~~~ 201 (486)
+..|+.||.+.+ -++++|+|.+|..++.++.. +++.|++++++|.|+..+ +.+.|+ .
T Consensus 181 ~~AA~~fgAd~t--------yFlvNGTS~gn~a~i~a~~~-----------~Gd~VLvdRN~HKSv~hgaLiLsGa---~ 238 (720)
T PRK13578 181 KHAAKVFNADKT--------YFVLNGTSASNKVVTNALLT-----------PGDLVLFDRNNHKSNHHGALIQAGA---T 238 (720)
T ss_pred HHHHHHhCCCce--------EEEeCChhHHHHHHHHHhcC-----------CCCEEEeecccHHHHHHHHHHHcCC---e
Confidence 448999999886 58899999999888877665 788999999999999996 889999 8
Q ss_pred eEEEeCCCCCC---CccCHHH-----HHHHHHHH-H--hCCCcc-EEEEEecCCccccccCChHHHHHH-HHHhCCEEEe
Q 041829 202 FRVLKTDSSTN---YSLSPDS-----LAEAISRD-L--TIGLIP-FFLCATVGTTSSTAVDPLLALGNI-AKSNGMWFHV 268 (486)
Q Consensus 202 v~~v~~~~~~~---~~id~~~-----L~~~i~~~-~--~~g~~p-~~vv~~~~~t~tG~id~l~~I~~i-a~~~g~~lhv 268 (486)
.++++...+.. +.++++. ++++|++. . .+..+| .++++|.+ |..|.+-++++|+++ |+.++ .+||
T Consensus 239 PVYl~P~~n~~Gi~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~p-TYdG~~ydi~~I~~~~~h~~~-~llv 316 (720)
T PRK13578 239 PVYLETARNPFGFIGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLG-TYDGTIYNARQVVDKIGHLCD-YILF 316 (720)
T ss_pred EEEeeccccccCCcCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECC-CCcceeecHHHHHHHhhccCC-cEEE
Confidence 89887654321 2456544 88888765 1 122345 66777765 578999999999999 68888 9999
Q ss_pred eccccchhccCccchhcc--cCCcCCC----ceeeecccccCCCCcceEEEEeCch-----------HHHHHhc----CC
Q 041829 269 DAAYAGSACICPEYRQYI--DGVEEAD----SFNMNAHKWFLTNFDCSALWVKDRN-----------TLIQSLS----TN 327 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~--~~~~~aD----s~~~~~hK~l~~p~~~g~l~~r~~~-----------~~~~~~~----~~ 327 (486)
|.|||+...+.|.++.+. ..-.++| .++.|.||.+.+-.+++++.+++.. .+.+++. .+
T Consensus 317 DEAhgah~~F~p~~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQaS~LHvk~~~i~g~~~~v~~~r~~~al~m~qSTS 396 (720)
T PRK13578 317 DSAWVGYEQFIPMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRLNNAFMLHASTS 396 (720)
T ss_pred eCcchhhhccCcccccCChhhhhcCCCCCCeEEEEChhhcchhhhhHhhhhcCCcccccccccCCHHHHHHHHHHHcCCC
Confidence 999999988877543321 1123788 9999999999999999999997632 2332221 12
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH-hcCCCeEEecCCCc--
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLV-AQDLRFEVVTPRIF-- 404 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l-~~~~~~~~~~~~~~-- 404 (486)
|.|+-- .++-+...+. .|..| ++++++..+++..+++.| +..++|+++.++..
T Consensus 397 PsY~Lm----------------------ASLDva~~~m-~~~~G-~~l~~~~i~~a~~~R~~l~~~~~~~~~~~p~~v~~ 452 (720)
T PRK13578 397 PFYPLF----------------------AALDVNAKMH-EGESG-RRLWMECVKLGIEARKLILARCKLIRPFIPPVVDG 452 (720)
T ss_pred hHHHHH----------------------HHHHHHHHHH-HHhhC-HHHHHHHHHHHHHHHHHHHHhCCCeeecccccccc
Confidence 223211 1111111111 12223 567778888888898888 77888888743211
Q ss_pred -------------eEEEEEecCCCC--------------Cc-------ccch----H------HHHHHHHHHHccCcEEE
Q 041829 405 -------------SLVCFRLLPPHN--------------DE-------DHGN----K------LNHKLLDDINSTGKIFI 440 (486)
Q Consensus 405 -------------~~v~f~~~~~~~--------------~~-------~~~~----~------~~~~l~~~l~~~g~~~~ 440 (486)
..-||.+.|... +. ...+ + -...+.+.|.++| +.+
T Consensus 453 ~~~~~~~~~~~~~~~~~w~~~p~~~whgf~~~~~~~~~lDP~KltI~t~G~~~~~G~~~~~Gipg~~l~~~L~e~g-I~~ 531 (720)
T PRK13578 453 KPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAEDQYFVDPCKLLLTTPGIDAETGEYEDFGIPATILANYLRENG-IVP 531 (720)
T ss_pred cccccCchhhhcccccccccccCccccccccccccccccCCceEEEEcCCcCcccccccccCccHHHHHHHHHHcC-CEE
Confidence 011122211100 00 0001 0 0245666666675 444
Q ss_pred EeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 441 SHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 441 ~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.-+... .+-+-+ ++..|++++++++++|.++.+
T Consensus 532 E~~d~~---~vL~l~-s~g~t~~~~~~Lv~aL~~f~~ 564 (720)
T PRK13578 532 EKCDLN---SILFLL-TPAEDMAKLQQLVAMLARFEK 564 (720)
T ss_pred EecCCC---eEEEEe-CCCCCHHHHHHHHHHHHHHHH
Confidence 433322 343444 778899999999999988754
No 188
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.81 E-value=5.2e-17 Score=163.55 Aligned_cols=330 Identities=12% Similarity=0.045 Sum_probs=204.7
Q ss_pred HHHHHHHHHHhcCcC---ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHH
Q 041829 90 AGFLGEMLSAGLNIV---GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALK 166 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~---~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 166 (486)
+..+.+.+...++.. ...|....+...+.+.+.+++.+.++.+.. ....++|+|+++++..++.+...
T Consensus 48 ~~~v~~a~~~~~~~~~~~~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~-----~~~i~~t~G~~~al~~~~~~l~~---- 118 (394)
T PRK06836 48 PAAVKEALRELAEEEDPGLHGYMPNAGYPEVREAIAESLNRRFGTPLT-----ADHIVMTCGAAGALNVALKAILN---- 118 (394)
T ss_pred CHHHHHHHHHHHhcCCcCcccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cCcEEEeCChHHHHHHHHHHhcC----
Confidence 455556555554422 234545567788888888888877654221 12588999999887776654422
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|+++..++..+...++..|+ +++.+|++++ ++.+|+++|++++++. +.+|+++.++|+|
T Consensus 119 -------~gd~Vli~~p~~~~~~~~~~~~g~---~v~~v~~~~~-~~~~d~~~l~~~~~~~------~~~v~~~~p~NPt 181 (394)
T PRK06836 119 -------PGDEVIVFAPYFVEYRFYVDNHGG---KLVVVPTDTD-TFQPDLDALEAAITPK------TKAVIINSPNNPT 181 (394)
T ss_pred -------CCCEEEEcCCCCccHHHHHHHcCC---EEEEEecCCc-cCcCCHHHHHhhcCcC------ceEEEEeCCCCCC
Confidence 667888899999999999999999 9999999865 3789999999998653 3578888999999
Q ss_pred cccCC---hHHHHHHHHH------hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeC
Q 041829 247 TAVDP---LLALGNIAKS------NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKD 316 (486)
Q Consensus 247 G~id~---l~~I~~ia~~------~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~ 316 (486)
|.+-| +++|+++|++ ||+++++|.+|..+.............. .-..+..++.|.++.| ..+|+++..+
T Consensus 182 G~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~-~~~i~~~S~SK~~~~pGlRiG~~~~~~ 260 (394)
T PRK06836 182 GVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVYDGAEVPYIFKYY-DNSIVVYSFSKSLSLPGERIGYIAVNP 260 (394)
T ss_pred CcCCCHHHHHHHHHHHHHhhhccCCCeEEEEeccccccccCCCCCCChHHcc-CcEEEEecchhhccCcceeeEEEecCH
Confidence 99966 6777778898 8999999999976542111111111111 1246667789999754 4688888754
Q ss_pred chHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCe
Q 041829 317 RNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRF 396 (486)
Q Consensus 317 ~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~ 396 (486)
.......+.....+.... .+.-....+...+....+. ++. ..++..+..+.+.+.|+++ |+
T Consensus 261 ~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~q~~~~~~l~-~~~--~~~~~~~~r~~l~~~L~~~-g~ 321 (394)
T PRK06836 261 EMEDADDLVAALVFANRI---------------LGFVNAPALMQRVVAKCLD-ATV--DVSIYKRNRDLLYDGLTEL-GF 321 (394)
T ss_pred HHhhhHHHHHHHHHHhhc---------------cccccCCHHHHHHHHHHhC-ChH--HHHHHHHHHHHHHHHHHhC-CC
Confidence 311000000000000000 0000011122222222222 121 2345566778888888887 78
Q ss_pred EEecCCCceEEEE-EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 397 EVVTPRIFSLVCF-RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 397 ~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
++. +|..+++.| +++. . + ..++.+.+.+.|..+..+..+...+++|+++ + .++++++..++.|+++
T Consensus 322 ~~~-~~~gg~~~~~~~~~-~------~--~~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~-~--~~~~~~~~~i~~l~~~ 388 (394)
T PRK06836 322 ECV-KPQGAFYLFPKSPE-E------D--DVAFCEKAKKHNLLLVPGSGFGCPGYFRLSY-C--VDTETIERSLPAFEKL 388 (394)
T ss_pred Eee-cCCceEEEEEeCCC-C------C--HHHHHHHHHhCCEEEECchhcCCCCeEEEEe-c--CCHHHHHHHHHHHHHH
Confidence 765 344444433 3321 1 1 1456666767775444444444346899999 4 3789999999999887
Q ss_pred HHH
Q 041829 476 ASA 478 (486)
Q Consensus 476 ~~~ 478 (486)
.++
T Consensus 389 l~~ 391 (394)
T PRK06836 389 AKE 391 (394)
T ss_pred HHH
Confidence 654
No 189
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.81 E-value=1.5e-17 Score=166.48 Aligned_cols=289 Identities=17% Similarity=0.173 Sum_probs=193.7
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
...|...++|+. ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|.+.
T Consensus 61 ~~~p~~~~le~~----lA~l~g~~~---------~i~~ssG~~Ai~~~l~all~-----------~GD~Vi~~~~~y~~~ 116 (398)
T PRK08249 61 NTNPTVQAFEEK----VRILEGAEA---------ATAFSTGMAAISNTLYTFLK-----------PGDRVVSIKDTYGGT 116 (398)
T ss_pred CCChHHHHHHHH----HHHHhCCCe---------EEEeCChHHHHHHHHHHhcC-----------CCCEEEEcCCchHHH
Confidence 466778888888 899999654 67888888888777665432 677899999999865
Q ss_pred HH----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 189 QK----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 189 ~~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
.. .+...|+ +++.++ ..|+++++++|++. +.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 117 ~~~~~~~~~~~Gi---~v~~vd-------~~d~e~l~~~i~~~------tklV~ie~p~NPtg~v~dl~~I~~la~~~gi 180 (398)
T PRK08249 117 NKIFTEFLPRMGV---DVTLCE-------TGDHEQIEAEIAKG------CDLLYLETPTNPTLKIVDIERLAAAAKKVGA 180 (398)
T ss_pred HHHHHHHHhhCCe---EEEEcC-------CCCHHHHHHhcCCC------CeEEEEECCCCCCCccCCHHHHHHHHHHcCC
Confidence 43 3455677 666554 35899999998653 3578888999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++||++|+.+....+ . ..++|.++.+++|+++++.. .|.+++.+++...+..... .
T Consensus 181 ~livD~t~a~~~~~~~-l------~~~~Divv~S~sK~l~g~~~~~gG~vv~~~~l~~~l~~~~-~-------------- 238 (398)
T PRK08249 181 LVVVDNTFATPINQNP-L------ALGADLVIHSATKFLSGHADALGGVVCGSKELMEQVYHYR-E-------------- 238 (398)
T ss_pred EEEEECCcCccccCCc-h------hhCCCEEeccCceecCCCCCceEEEEECCHHHHHHHHHHH-H--------------
Confidence 9999999985442211 1 12689999999999987653 3344445554333221110 0
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..+.....+.+|.+++ |.+.+..++++..++++.+.+.|+++|.++-+.-| ..++
T Consensus 239 ------~~g~~~s~~~a~l~l~--~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~ 310 (398)
T PRK08249 239 ------INGATMDPMSAYLILR--GMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGI 310 (398)
T ss_pred ------hcCCCCCHHHHHHHHh--CcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCce
Confidence 0122234556676665 56778889999999999999999999988744321 1358
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeee-----E-------CC--EeEEEEEecCCCCCHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTV-----L-------SG--KYILRFAVGAPLTEWR 463 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~~--~~~lRi~~~~~~~t~~ 463 (486)
++|.+.. ..+...++.+.|.-- |. ....+.. . .| .+.+|+|+ --|
T Consensus 311 ~sf~~~~-------~~~~~~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~sv-----GlE 378 (398)
T PRK08249 311 LSFVLKG-------GMDTVKRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISV-----GIE 378 (398)
T ss_pred EEEEEcC-------CHHHHHHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEe-----ccC
Confidence 8888853 122334566654321 10 0111110 0 11 25899999 345
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKASAL 479 (486)
Q Consensus 464 di~~~~~~l~~~~~~l 479 (486)
|++.+++.|.+..+.+
T Consensus 379 ~~~dl~~dl~~al~~~ 394 (398)
T PRK08249 379 DTEDLIADLEQAFAHL 394 (398)
T ss_pred CHHHHHHHHHHHHHHh
Confidence 6777777777766543
No 190
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.81 E-value=7.3e-18 Score=166.65 Aligned_cols=234 Identities=14% Similarity=0.134 Sum_probs=166.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|...+||++ ++++.|.+. +++++||++|+..++. +.. +++.|+++...+....
T Consensus 52 ~~p~~~~le~~----lA~leg~~~---------~v~~~sG~aAi~~~l~-~l~-----------~GD~VI~~~~~yg~~~ 106 (364)
T PRK07269 52 KNPTRAKLEET----LAAIESADY---------ALATSSGMSAIVLAFS-VFP-----------VGSKVVAVRDLYGGSF 106 (364)
T ss_pred CCccHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHH-HhC-----------CCCEEEEecCCcCchH
Confidence 57888899998 888887543 7999999999887763 322 6677777766654333
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.......- +. .+.+ .+.+|+++++++|++++ .+|+++.++|++|.+.|+++|+++|+++|++++||
T Consensus 107 ~~~~~~~~---~~-~~~~----~~~~d~~~l~~~i~~~T------klV~lesP~NPtg~~~di~~I~~la~~~gi~vvvD 172 (364)
T PRK07269 107 RWFNQQEK---EG-RFHF----TYANTEEELIAAIEEDT------DIVYIETPTNPLMVEFDIEKVAKLAHAKGAKVIVD 172 (364)
T ss_pred HHHHHHHh---cC-cEEE----EecCCHHHHHHhcCcCc------eEEEEECCCCCCCeeeCHHHHHHHHHHcCCEEEEE
Confidence 32221100 00 1111 13568999999987643 48999999999999999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
++|+......| .. .++|.++.+.||+++++.+ .|+++.++++...+... ...
T Consensus 173 ~t~~~~~~~~p-l~------~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~-----~~~-------------- 226 (364)
T PRK07269 173 NTFYSPIYQRP-IE------LGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFY-----NLN-------------- 226 (364)
T ss_pred CCCcccccCCc-hh------hCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHH-----HHH--------------
Confidence 99876543211 11 2799999999999998765 67777777654332211 000
Q ss_pred ccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE-ecCCCceEEEEEec
Q 041829 348 QIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV-VTPRIFSLVCFRLL 412 (486)
Q Consensus 348 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~-~~~~~~~~v~f~~~ 412 (486)
..|.....+.+|..++ |.+.+..++++..+++..+.++|+++|+++- +.|+..++++|.+.
T Consensus 227 --~~G~~~s~~~a~l~~~--~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg~gg~~sf~~~ 288 (364)
T PRK07269 227 --TTGAVLSPFDSYLLMR--GLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTGKGGMISFKVA 288 (364)
T ss_pred --HhCCCCCHHHHHHHHc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCCcCcEEEEEEC
Confidence 0122345567776665 4567899999999999999999999998754 44777889999985
No 191
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.81 E-value=2.1e-17 Score=165.69 Aligned_cols=233 Identities=15% Similarity=0.124 Sum_probs=170.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-- 187 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (486)
..|...++|++ ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|..
T Consensus 68 ~~p~~~~le~~----lA~l~g~~~---------al~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~~~~t~ 123 (403)
T PRK07810 68 GNPTVSMFEER----LRLIEGAEA---------CFATASGMSAVFTALGALLG-----------AGDRLVAARSLFGSCF 123 (403)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECChHHHHHHHHHHHhC-----------CCCEEEEccCCcchHH
Confidence 66778888888 899999663 78999999988877765432 67788888766633
Q ss_pred --HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 188 --LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 188 --~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+.++..|+ +++.++. .|++++++++++.+ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 124 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~ai~~~t------klV~~esp~Nptg~v~dl~~I~~la~~~g~~ 187 (403)
T PRK07810 124 VVCNEILPRWGV---ETVFVDG-------EDLSQWEEALSVPT------QAVFFETPSNPMQSLVDIAAVSELAHAAGAK 187 (403)
T ss_pred HHHHHHHHHcCc---EEEEECC-------CCHHHHHHhcCcCc------eEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3455667788 8888863 38999999987643 4789999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+....+ . . .++|.++.+.+|+++++.. .|+++.++. .+...+. .++.
T Consensus 188 vivD~a~a~~~~~~~-~-~-----~gaDivv~S~tK~l~g~g~~~gG~v~~~~~-~~~~~l~---~~~~----------- 245 (403)
T PRK07810 188 VVLDNVFATPLLQRG-L-P-----LGADVVVYSGTKHIDGQGRVLGGAILGDRE-YIDGPVQ---KLMR----------- 245 (403)
T ss_pred EEEECCCCccccCCh-h-h-----cCCcEEEccCCceecCCcCceeEEEEeChH-HHHHHHH---HHHH-----------
Confidence 999999976543222 1 1 1689999999999987543 566665543 2321111 1111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----C-----------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-P-----R-----------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~-----~-----------~~~~ 406 (486)
..+.....+.+|..++ |.+.+..++++..+++..+.+.|+++|+++-+. | | ..++
T Consensus 246 ------~~g~~~s~~~a~l~l~--~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~ 317 (403)
T PRK07810 246 ------HTGPALSAFNAWVLLK--GLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTV 317 (403)
T ss_pred ------HhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceE
Confidence 0122345556776665 667889999999999999999999999986443 2 1 2458
Q ss_pred EEEEec
Q 041829 407 VCFRLL 412 (486)
Q Consensus 407 v~f~~~ 412 (486)
++|.+.
T Consensus 318 ~s~~l~ 323 (403)
T PRK07810 318 VTFELD 323 (403)
T ss_pred EEEEEc
Confidence 889885
No 192
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.81 E-value=3.3e-17 Score=164.45 Aligned_cols=287 Identities=17% Similarity=0.187 Sum_probs=193.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...+||+. +++++|.+. .++++||+.|+..++.+... +++.|+++...|.+..
T Consensus 62 ~~p~~~~Le~~----iA~~~g~~~---------~l~~~sG~~Ai~~al~~ll~-----------~Gd~Vl~~~~~y~~~~ 117 (400)
T PRK06234 62 GNPTSTEVENK----LALLEGGEA---------AVVAASGMGAISSSLWSALK-----------AGDHVVASDTLYGCTF 117 (400)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCccchHH
Confidence 57888899998 888888643 68999999988777654432 6778888888776544
Q ss_pred ----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--C
Q 041829 190 ----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--G 263 (486)
Q Consensus 190 ----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g 263 (486)
..++..|+ +++.++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++ |
T Consensus 118 ~~~~~~~~~~G~---~v~~vd~~-------d~e~l~~~i~~~------tklI~iesP~NPtG~v~dl~~I~~la~~~~~~ 181 (400)
T PRK06234 118 ALLNHGLTRYGV---EVTFVDTS-------NLEEVRNALKAN------TKVVYLETPANPTLKVTDIKAISNIAHENNKE 181 (400)
T ss_pred HHHHHHHhhCCe---EEEEECCC-------CHHHHHHHhccC------CeEEEEECCCCCCCCcCCHHHHHHHHHhcCCC
Confidence 34566788 88887642 899999998754 35888999999999999999999999997 9
Q ss_pred CEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcC-CcccccccccccCC
Q 041829 264 MWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLST-NPEFLKNKASQANM 340 (486)
Q Consensus 264 ~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~ 340 (486)
+++++|++|+.+....+ . + .++|.++.+++|+++++.. .|+++.++ +...+ +.. ...+.
T Consensus 182 i~livDea~~~~~~~~~-l-----~-~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~-l~~~~~~~~--------- 243 (400)
T PRK06234 182 CLVFVDNTFCTPYIQRP-L-----Q-LGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQ-VKLFGIKDM--------- 243 (400)
T ss_pred CEEEEECCCCchhcCCc-h-----h-hCCcEEEeeccccccCCCCceeEEEEecH-HHHHH-HHHHHHHHh---------
Confidence 99999999986543211 1 1 1689999999999987753 47766654 33322 211 00110
Q ss_pred ccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------C
Q 041829 341 VVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------I 403 (486)
Q Consensus 341 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~ 403 (486)
.+.....+.+|..++ |.+.+..++++..++++++.+.|+++|.+.-+.-| .
T Consensus 244 ----------~g~~l~p~~a~l~~~--~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~ 311 (400)
T PRK06234 244 ----------TGSVIGPFEAFLIIR--GMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLP 311 (400)
T ss_pred ----------cCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCC
Confidence 112234455666665 45667788999999999999999999887544221 2
Q ss_pred ceEEEEEecCCCCCcccchHHHHHHHHHHHccCc---------EEEEee-----eE-------CC--EeEEEEEecCCCC
Q 041829 404 FSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK---------IFISHT-----VL-------SG--KYILRFAVGAPLT 460 (486)
Q Consensus 404 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~---------~~~~~~-----~~-------~~--~~~lRi~~~~~~~ 460 (486)
.++++|.+... .+...++.+.|..-+. ....+. .+ .| .+.+|+|+ .
T Consensus 312 g~l~s~~l~~~-------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~sv-G--- 380 (400)
T PRK06234 312 GAMISFELKGG-------VEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSV-G--- 380 (400)
T ss_pred CceEEEEecCc-------HHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEe-C---
Confidence 35888888631 1223566666543220 011110 00 01 25799999 3
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~ 478 (486)
-||.+.+++.|++..+.
T Consensus 381 -lE~~~dl~~dl~~al~~ 397 (400)
T PRK06234 381 -LEDVDDIIADLKQALDL 397 (400)
T ss_pred -CCCHHHHHHHHHHHHHH
Confidence 34666777777666554
No 193
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.81 E-value=1.8e-17 Score=166.94 Aligned_cols=308 Identities=14% Similarity=0.144 Sum_probs=192.1
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|++ ++++.|.+. .+++++|++|+..++.+... +++.|+++...|....
T Consensus 56 ~~pt~~~Le~~----lA~l~g~~~---------~l~~ssG~~Ai~~al~al~~-----------~Gd~Vl~~~~~Y~~t~ 111 (425)
T PRK06084 56 MNPTNDVLEQR----VAALEGGVG---------ALAVASGMAAITYAIQTIAE-----------AGDNIVSVAKLYGGTY 111 (425)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------eeEehhHHHHHHHHHHHHhC-----------CCCEEEEeCCCcchHH
Confidence 45677788888 899998543 68889999888888766543 5677888877776444
Q ss_pred HHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+.. .|+ ++..++ ..|+++|++++++++ .+|+++.++|++|.+-|+++|+++|+++|++
T Consensus 112 ~~~~~~l~~~gi---~v~~~d-------~~d~e~le~ai~~~t------klV~lesp~NPtG~v~dl~~I~~la~~~~i~ 175 (425)
T PRK06084 112 NLLAHTLPRIGI---ETRFAA-------HDDIAALEALIDERT------KAVFCESIGNPAGNIIDIQALADAAHRHGVP 175 (425)
T ss_pred HHHHHhccccee---EEEEEC-------CCCHHHHHHHhccCC------cEEEEeCCCCCCCeecCHHHHHHHHHHcCCE
Confidence 44332 344 555444 348999999987643 4788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHH------hc-CCccccccccc
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQS------LS-TNPEFLKNKAS 336 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~------~~-~~~~yl~~~~~ 336 (486)
++||++|+.+....+ .. .++|.++.+.+|+++++.. .|++..+........ +. ..+.|..-...
T Consensus 176 vVvD~a~a~~~~~~p-~~------~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (425)
T PRK06084 176 LIVDNTVATPVLCRP-FE------HGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSYHGVTYT 248 (425)
T ss_pred EEEECCCcccccCCh-hh------cCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCcccccchhh
Confidence 999999986543211 11 1699999999999987743 444433222111110 11 11122110000
Q ss_pred ccCCccCC-----CCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---------
Q 041829 337 QANMVVDY-----KDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR--------- 402 (486)
Q Consensus 337 ~~~~~~~~-----~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~--------- 402 (486)
...+.... .......+.....+.+|..++ |.+.+..++++..++|..+.+.|+++|+++-+.-|
T Consensus 249 ~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lr--gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~p~~~ 326 (425)
T PRK06084 249 EAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQ--GLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHE 326 (425)
T ss_pred hhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCcccHH
Confidence 00000000 000112334455567776665 67888999999999999999999999998644311
Q ss_pred ---------CceEEEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeee-----E-------CC--EeE
Q 041829 403 ---------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTV-----L-------SG--KYI 450 (486)
Q Consensus 403 ---------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~~--~~~ 450 (486)
..++++|.+... .+...++.+.|.-- |. ....+.. . .| .+.
T Consensus 327 ~~~~~~~g~~gg~~s~~~~~~-------~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~l 399 (425)
T PRK06084 327 LARRYMGGKPASILSFGIKGG-------QAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDM 399 (425)
T ss_pred HHHHhCCCCcceEEEEEecCC-------HHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCe
Confidence 135888888631 22234566655321 11 0111110 0 11 358
Q ss_pred EEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 451 LRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 451 lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
+|+|+ --||.+.+++.|.+....
T Consensus 400 iR~sv-----GlEd~~dLi~dl~~Al~~ 422 (425)
T PRK06084 400 VRLSI-----GIEHIDDIIADLAQALDA 422 (425)
T ss_pred EEEEe-----ccCCHHHHHHHHHHHHHh
Confidence 99999 345777777777776654
No 194
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.80 E-value=3.5e-17 Score=162.69 Aligned_cols=311 Identities=14% Similarity=0.122 Sum_probs=199.2
Q ss_pred HHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 90 AGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+..+.+.+...+... ...|.. +...++++. +++.+|.+.. ...++|+|+++++..++.+..+
T Consensus 41 ~~~~~~~~~~~~~~~~~~~Y~~-~~~~~lr~~----ia~~~~~~~~------~~I~~t~G~~~~i~~~~~~~~~------ 103 (356)
T PRK04870 41 PAELRAELGERLAEVALNRYPD-PRAAALKAA----LRAAMGVPAG------ADVLLGNGSDELIQLLALACAK------ 103 (356)
T ss_pred CHHHHHHHHHHhhccccccCCC-CCHHHHHHH----HHHHhCcCCC------CcEEEcCCHHHHHHHHHHHhcC------
Confidence 344455555544332 233433 444555555 7777787542 1478888877776665544332
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
+++.|+++..+|..+...++..|+ +++.+|+++ +|.+|+++|++++++.. +.+|+++.++|+||.
T Consensus 104 -----~gd~vlv~~P~y~~~~~~~~~~g~---~~~~i~~~~--~~~~d~~~l~~~~~~~~-----~~~v~l~~p~NPtG~ 168 (356)
T PRK04870 104 -----PGATVLAPEPGFVMYRMSAKLAGL---EFVGVPLTA--DFTLDLPAMLAAIAEHR-----PALVFLAYPNNPTGN 168 (356)
T ss_pred -----CCCEEEECCCCHHHHHHHHHHcCC---EEEEecCCC--CCCCCHHHHHHHhhcCC-----CCEEEEcCCCCCCCC
Confidence 677899999999999999999999 999999874 37999999999986421 347778889999999
Q ss_pred cCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCc
Q 041829 249 VDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNP 328 (486)
Q Consensus 249 id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~ 328 (486)
+-+.+++.++++..+.++++|++|..+.. ..+...+...+. -.++.++.|++.....+|+++..+ ..+.+......
T Consensus 169 ~~~~~~~~~i~~~~~~~ii~De~y~~~~~--~~~~~~~~~~~~-vi~~~S~SK~~~~GlRiG~~i~~~-~~i~~~~~~~~ 244 (356)
T PRK04870 169 LFDDADVERIIEAAPGLVVVDEAYQPFAG--DSWLPRLARFPN-LLVMRTVSKLGLAGLRLGYLAGHP-AWIAELDKVRP 244 (356)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCchhhcC--cchHHHHhhCCC-EEEEecchhhhhHHHhhhhhhCCH-HHHHHHHHccC
Confidence 99998888888877899999999975431 111111111111 245667889433333478776543 33332211111
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEE
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLV 407 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v 407 (486)
.|- ...+...++...+ ..+.+++..++..++++++.+.|++++++.+. ++..+.+
T Consensus 245 ~~~-----------------------~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~~~ 300 (356)
T PRK04870 245 PYN-----------------------VNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAALAALPGVTVF-PSAANFI 300 (356)
T ss_pred CCc-----------------------CCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCeEE
Confidence 110 1112222222222 12447778888888999999999998888764 5555666
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+++.. ..++.+.|.+.|........+. +.+++|+++ + +.+++++++++|+++
T Consensus 301 ~~~~~~-----------~~~~~~~l~~~gI~v~~~~~f~~~~~~~iRis~-~---~~~~~~~l~~al~~~ 355 (356)
T PRK04870 301 LVRVPD-----------AAAVFDGLKTRGVLVKNLSGMHPLLANCLRVTV-G---TPEENAQFLAALKAA 355 (356)
T ss_pred EEECCC-----------HHHHHHHHHHCCEEEEECCCCCCCCCCeEEEeC-C---CHHHHHHHHHHHHHh
Confidence 666531 1456677777774433333332 246999999 3 689999999999865
No 195
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=99.80 E-value=1.5e-17 Score=165.94 Aligned_cols=232 Identities=16% Similarity=0.201 Sum_probs=164.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-- 187 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (486)
..|...++|+. +++++|.+. .++++||+.|+..++.+... +++.|+++...|.+
T Consensus 52 ~~p~~~~le~~----la~l~g~~~---------~~~~~sG~~Ai~~al~al~~-----------~Gd~Vl~~~~~~~~t~ 107 (380)
T TIGR01325 52 ANPTVAAFEER----IAALEGAER---------AVATATGMSAIQAALMTLLQ-----------AGDHVVASRSLFGSTV 107 (380)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHHhC-----------CCCEEEEecCCcchHH
Confidence 45667778877 899998753 68899999999888765432 56677777777754
Q ss_pred --HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 188 --LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 188 --~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+.+..+|+ +++.++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 108 ~~~~~~~~~~g~---~v~~v~~~-------d~~~l~~~i~~~------tklV~le~p~np~g~~~dl~~I~~la~~~gi~ 171 (380)
T TIGR01325 108 GFISEILPRFGI---EVSFVDPT-------DLNAWEAAVKPN------TKLVFVETPSNPLGELVDIAALAELAHAIGAL 171 (380)
T ss_pred HHHHHHHHHhCC---EEEEECCC-------CHHHHHHhcCCC------ceEEEEECCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 3345667788 88888753 788888887543 45888999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-c-eEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-C-SALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~-g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.+....+ .. .++|.++.+++|+++++.. . |+++. +++.+.. +. .+..
T Consensus 172 livD~a~~~~~~~~p-l~------~g~Divv~S~sK~l~g~g~~~gG~vv~-~~~~~~~-l~---~~~~----------- 228 (380)
T TIGR01325 172 LVVDNVFATPVLQQP-LK------LGADVVVYSATKHIDGQGRVMGGVIAG-SEELMAE-VA---VYLR----------- 228 (380)
T ss_pred EEEECCCcccccCCc-hh------hCCCEEEeeccceecCCCCeEEEEEEe-CHHHHHH-HH---HHHH-----------
Confidence 999999975433221 11 1689999999999988742 3 55544 4333322 11 1110
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..|.......+|.+++ |.+.+..++++..++++++.+.|+++|+++-+.-| ..++
T Consensus 229 ------~~g~~~~p~~a~~~l~--~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~ 300 (380)
T TIGR01325 229 ------HTGPAMSPFNAWVLLK--GLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTV 300 (380)
T ss_pred ------hhCCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceE
Confidence 1122233445666665 56778888999999999999999999987643211 1458
Q ss_pred EEEEec
Q 041829 407 VCFRLL 412 (486)
Q Consensus 407 v~f~~~ 412 (486)
++|.+.
T Consensus 301 ~s~~l~ 306 (380)
T TIGR01325 301 IGFDVA 306 (380)
T ss_pred EEEEEC
Confidence 888885
No 196
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.80 E-value=4.9e-18 Score=166.90 Aligned_cols=317 Identities=15% Similarity=0.052 Sum_probs=204.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh-
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA- 187 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s- 187 (486)
..+|.+.++-+++.+.|.++++.+.++ ...++++|||.++-.++...... ++..+++.. .++
T Consensus 32 HRs~~F~~i~~e~~~~L~~l~~~~~~~-----~v~~l~GsGT~a~Eaa~~nl~~~----------~g~~vLv~g--~FG~ 94 (374)
T TIGR01365 32 HRSKLGKEKLAEAIKKTREMLGVPADY-----LIGIVPASDTGAVEMALWSMLGC----------RGVDVLAWE--SFGK 94 (374)
T ss_pred cCCHHHHHHHHHHHHHHHHHhCCCCCc-----EEEEECCchHHHHHHHHHHcCCC----------CCCeEEEEC--HHHH
Confidence 568999999999999999999986542 13577999998877666543311 444444443 433
Q ss_pred -HH-HHHHHhCCCCCC-eEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 188 -LQ-KACQIGGIHPQN-FRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 188 -~~-~a~~~~g~g~~~-v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
+. +.|+.+|+ + +..+..+.+. .+|++.++. . + .|++++..|.||+..|+++|+..+ ++.
T Consensus 95 r~~~eia~~~g~---~~v~~l~~~~g~--~~~~~~ve~----~-~------~v~~vhnETSTGv~npv~~i~~~~--~~~ 156 (374)
T TIGR01365 95 GWVTDVTKQLKL---PDVRVLEAEYGK--LPDLKKVDF----K-N------DVVFTWNGTTSGVRVPNGDFIPAD--REG 156 (374)
T ss_pred HHHHHHHHhcCC---CCcEEEcCCCCC--CCCHHHcCC----C-C------CEEEecCCCchheecccccccccc--CCC
Confidence 34 78888998 5 6777766654 789999973 1 1 167999999999999997766432 589
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCc-----ccccccccccC
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNP-----EFLKNKASQAN 339 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~-----~yl~~~~~~~~ 339 (486)
.++||+.-+.+...++ ++++|.+..++||+++.|.|.++++++++.. .+.-.... .|+.......
T Consensus 157 lliVDavSs~g~~~l~--------~d~iDv~~tgsQK~L~~ppGls~v~vs~~Al-~~~~~~~~y~~~~~~~~~~~~~~- 226 (374)
T TIGR01365 157 LTICDATSAAFAQDLD--------YHKLDVVTFSWQKVLGGEGAHGMLILSPRAV-ARLESYTPAWPLPKIFRLTKGGK- 226 (374)
T ss_pred cEEEEccchhcCCCCC--------hhHCcEEEEechhccCCCCceEEEEECHHHH-HHHhhcCCCCCChhhhccccccc-
Confidence 9999997655443332 2259999999999999999999999988753 22221111 1221100000
Q ss_pred CccCCCCCccCCCCCC--CcHHHHHH---HHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeEEecC-C---CceEEEE
Q 041829 340 MVVDYKDWQIPLGRRF--RSLKLWMV---LRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP-R---IFSLVCF 409 (486)
Q Consensus 340 ~~~~~~~~~~~~sr~~--~~l~~~~~---l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~-~---~~~~v~f 409 (486)
-..+.. ....++ ....+++. ++.+-.+ |++++.+|+.++++.+++.++++..++++.. + ...++++
T Consensus 227 ~~~~~~----~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~~~Rh~~~a~~l~~~l~~lg~l~~~~~~~~~rS~tvt~v 302 (374)
T TIGR01365 227 LNKKIF----EGSTINTPSMLCVEDWLDALKWAESIGGLKPLIARADDNLAVLEAFVAKNNWIHFLAETPEIRSNTSVCL 302 (374)
T ss_pred hhhhhh----cCCCCCChHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHHCCCcccCCCChhhcCCCeEEE
Confidence 000000 011111 11233333 4333454 8999999999999999999999943777752 1 2335667
Q ss_pred EecCCCCC---cccchHHHHHHHHHHHccCcEEEEee--eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHND---EDHGNKLNHKLLDDINSTGKIFISHT--VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 410 ~~~~~~~~---~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+.+.+.+ +....++..++.+.|.++| +.+.+. ...+ ..|||.. .+..+.+|++.+++.|.=+.+
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g-i~i~~G~~~~~~-~~fRIg~-~G~i~~~di~~l~~~l~~~~~ 372 (374)
T TIGR01365 303 KVVDPAIDALDEDAQADFAKELISTLEKEG-VAYDIGSYRDAP-SGLRIWC-GATVEKSDLECLCPWLDWAFA 372 (374)
T ss_pred EeCCccccccccchhhHHHHHHHHHHHHCC-EEEeccccccCC-CceEEec-CCcCCHHHHHHHHHHHHHHHh
Confidence 76432110 0001112366888888887 444433 2333 5899999 677899999999999976544
No 197
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.80 E-value=2.3e-17 Score=164.36 Aligned_cols=292 Identities=14% Similarity=0.152 Sum_probs=192.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++.|.+ ..++++||++++..++.+... +++.|+++...|.+..
T Consensus 50 ~~pt~~~L~~~----lA~l~g~~---------~~i~~~sg~~Ai~~~l~~l~~-----------~GD~Vl~~~~~y~~~~ 105 (386)
T PRK08045 50 GNPTRDVVQRA----LAELEGGA---------GAVLTNTGMSAIHLVTTVFLK-----------PGDLLVAPHDCYGGSY 105 (386)
T ss_pred CCccHHHHHHH----HHHHhCCC---------eEEEECCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 45667777777 88888843 389999999888777764432 6778888988887644
Q ss_pred HHHH-HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 190 KACQ-IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~-~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
..+. ..+.+.-++..++ ..|++++++++++. +.+|+++.++|++|.+-|+++|.++|+++|++++|
T Consensus 106 ~~~~~~~~~~gi~v~~vd-------~~d~e~l~~~l~~~------tklV~l~sP~NPtG~v~di~~I~~ia~~~g~~viv 172 (386)
T PRK08045 106 RLFDSLAKRGCYRVLFVD-------QGDEQALRAALAEK------PKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVV 172 (386)
T ss_pred HHHHHHHhhCCeEEEEeC-------CCCHHHHHHhcccC------CeEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 4332 2222111454442 35899999888653 35788899999999999999999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
|++|+.+....| .. .++|.++.+.|||++++.+ .|+++.++++...+ +.....++
T Consensus 173 Deay~~~~~~~p-l~------~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~-l~~~~~~~--------------- 229 (386)
T PRK08045 173 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTE-LAWWANNI--------------- 229 (386)
T ss_pred ECCCCccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCcHHHHHH-HHHHHHhc---------------
Confidence 999976543221 11 1689999999999998875 67776666543322 11111111
Q ss_pred CccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C-----C-----------CceEEEE
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-P-----R-----------IFSLVCF 409 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~-----~-----------~~~~v~f 409 (486)
+-....+..|.+++. .+.+..++++..+++..+.++|+++|.++-+. | | ..++++|
T Consensus 230 -----g~~~~p~~~~l~~rg--l~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~ 302 (386)
T PRK08045 230 -----GVTGGAFDSYLLLRG--LRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSF 302 (386)
T ss_pred -----CCCCCHHHHHHHHhh--hccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEE
Confidence 112345567777764 45688999999999999999999999886442 1 1 1348888
Q ss_pred EecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeee-----E-------CC--EeEEEEEecCCCCCHHHHH
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTV-----L-------SG--KYILRFAVGAPLTEWRHVN 466 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~~--~~~lRi~~~~~~~t~~di~ 466 (486)
.+.. + .+...++.+.|.-- |. ....+.. . .| .+.+|+|+ --||++
T Consensus 303 ~~~~-~------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~sv-----GlE~~~ 370 (386)
T PRK08045 303 ELDG-D------EQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRIST-----GIEDGE 370 (386)
T ss_pred EecC-c------HHHHHHHHHhccceeEeccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEe-----CcCCHH
Confidence 8853 1 22234566655321 10 0111110 0 11 35899999 335677
Q ss_pred HHHHHHHHHHHHHH
Q 041829 467 AAWEVMQDKASALL 480 (486)
Q Consensus 467 ~~~~~l~~~~~~l~ 480 (486)
.+++.|.+..+...
T Consensus 371 dl~~dl~~al~~~~ 384 (386)
T PRK08045 371 DLIADLENGFRAAN 384 (386)
T ss_pred HHHHHHHHHHHHhh
Confidence 77777777766543
No 198
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.80 E-value=7.8e-17 Score=159.82 Aligned_cols=291 Identities=12% Similarity=0.107 Sum_probs=192.9
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
+...++.++ +++.++.+++ +.++|+|+++++..++.+. . ++ .|++....+..+...
T Consensus 54 ~~~~~lr~~----ia~~~~~~~~-------~i~it~Ga~~~l~~~~~~~-~-----------~~-~v~i~~P~y~~~~~~ 109 (354)
T PRK06358 54 PDYLELRKR----IASFEQLDLE-------NVILGNGATELIFNIVKVT-K-----------PK-KVLILAPTFAEYERA 109 (354)
T ss_pred ccHHHHHHH----HHHHhCCChh-------hEEECCCHHHHHHHHHHHh-C-----------CC-cEEEecCChHHHHHH
Confidence 334556555 6666687665 6899999998877665532 1 33 467788899899999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEe
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHV 268 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhv 268 (486)
++..|+ +++.+|++.+++|.+| +++.+.+.+. +.+|+++.++|+||.+-+ +++|.++|+++|+++++
T Consensus 110 ~~~~g~---~~~~~~~~~~~~~~~d-~~~~~~~~~~------~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~ 179 (354)
T PRK06358 110 LKAFDA---EIEYAELTEETNFAAN-EIVLEEIKEE------IDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLII 179 (354)
T ss_pred HHHcCC---eeEEEeCccccCCCcc-HHHHHhhccC------CCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEE
Confidence 999999 9999999865557899 6665555332 456778899999999965 78888899999999999
Q ss_pred eccccchhccCccchhcccCCcCCC--ceeeecccccC-CCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEAD--SFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aD--s~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
|.+|..+.... .....+..+...+ .+..++.|.++ ...-+|+++..++............+
T Consensus 180 De~Y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~gl~G~RiG~lv~~~~~~~~~~~~~~~~~--------------- 243 (354)
T PRK06358 180 DEAFMDFLEEN-ETISMINYLENFKNLIIIRAFTKFFAIPGLRLGYGLTSNKNLAEKLLQMREPW--------------- 243 (354)
T ss_pred eCcccccCCCc-cchhHHHhccCCCCEEEEEechhhccCcchhheeeecCCHHHHHHHHHhCCCC---------------
Confidence 99997554321 1111111122222 44667899998 44568888775544322221111111
Q ss_pred CCccCCCCCCCcHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHH
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGL-ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKL 424 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 424 (486)
....+..+++...+.. +.+++..+...+.++.+.+.|++++++++. +|..+.+.+++.+ .
T Consensus 244 --------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~-------~--- 304 (354)
T PRK06358 244 --------SINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEFKGIKVY-KPSVNFIFFKLEK-------P--- 304 (354)
T ss_pred --------cchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEc-CCcceEEEEEcCc-------h---
Confidence 1122333444444432 344777778888899999999998887765 4566666665532 1
Q ss_pred HHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 425 NHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 425 ~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.++.+.|.+.|.....+..+. +..++|+++ . ++++.++++++|+++.
T Consensus 305 -~~~~~~l~~~gI~v~~~~~f~~~~~~~iRls~-~---~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 305 -IDLRKELLKKGILIRSCSNYRGLDENYYRVAV-K---SREDNKKLLKALEVIL 353 (354)
T ss_pred -HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEe-C---CHHHHHHHHHHHHHHh
Confidence 467778888875444444443 346899998 2 6899999999998764
No 199
>PRK06855 aminotransferase; Validated
Probab=99.80 E-value=9.3e-17 Score=163.37 Aligned_cols=347 Identities=10% Similarity=0.029 Sum_probs=210.5
Q ss_pred HHHHHHHHHHHhcC-cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLN-IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 89 ~~~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
+|..+.+.+...+. .....|....+..++.+.+.+|+.+..|.+.+ ..+.++|+|+++++..++. ..+
T Consensus 49 ~p~~~~~a~~~~~~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~-----~~~I~it~G~~~al~~~~~-l~~----- 117 (433)
T PRK06855 49 IPDWMKEIVAELVMDDKSYGYCPTKGVLETREFLAELNNKRGGAQIT-----PDDIIFFNGLGDAIAKIYG-LLR----- 117 (433)
T ss_pred CCHHHHHHHHHHhhcCCCCCCCCCCCCHHHHHHHHHHHHhccCCCCC-----HhHEEEcCcHHHHHHHHHH-hcC-----
Confidence 34445555544432 23345666677889999999999998776432 1268899999988766653 222
Q ss_pred hCccCCCCeEEEecCCCchhHHHHH-HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 168 VGKNSLEKLVVYASDQTHSALQKAC-QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~a~-~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|++.+.+++.+..+. ...|+ +++.+|++++++|.+|+++|+++++... .+.+++++.++|||
T Consensus 118 ------~Gd~Vlv~~P~Y~~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~----~~~~i~l~~P~NPT 184 (433)
T PRK06855 118 ------REARVIGPSPAYSTHSSAEAAHAGY---PPVTYRLDPENNWYPDLDDLENKVKYNP----SIAGILLINPDNPT 184 (433)
T ss_pred ------CCCeEEEeCCCCchHHHHHHHhcCC---eEEEEecccccCCCCCHHHHHHHHhcCC----CceEEEEECCCCCC
Confidence 6778888988888765442 34577 8889998865558899999999986321 13467778899999
Q ss_pred cccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC-CceeeecccccC-CCCcceEEEEeCc---h
Q 041829 247 TAVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA-DSFNMNAHKWFL-TNFDCSALWVKDR---N 318 (486)
Q Consensus 247 G~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a-Ds~~~~~hK~l~-~p~~~g~l~~r~~---~ 318 (486)
|.+-+ +++|+++|++||+|+++|.+|+...+....+.....-...- -.+..++.|.++ ...-+|+++..+. .
T Consensus 185 G~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~~~~~sl~~~~~~~~~I~~~S~SK~~~~pGlRiG~ii~p~~~~~~ 264 (433)
T PRK06855 185 GAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNGKKTVPLSEVIGDVPGIALKGISKELPWPGSRCGWIEVYNADKDE 264 (433)
T ss_pred CcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCCCCCHHHHcCcCCeEEEecCccccCCCcceEEEEEEeCCchhh
Confidence 99955 67788889999999999999987543211111111101111 245667899997 4456899887321 1
Q ss_pred HHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--C--hhhHHHHHHHHHHHHHHHHHHHhcCC
Q 041829 319 TLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--G--LENLQGYIRNHIQLAKHFEGLVAQDL 394 (486)
Q Consensus 319 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g--~~g~~~~~~~~~~~a~~l~~~l~~~~ 394 (486)
.+...+.....+... . .+ ...+...++...+ + .+.+++..++..++.+.+.+.|++++
T Consensus 265 ~~~~~~~~~~~~~~~--------------~-~~---~~~~~Q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~~ 326 (433)
T PRK06855 265 VFKKYINSILNAKMI--------------E-VC---STTLPQMAIPRIMSHPEYKNYLKERNKRYEKRSNIAYEKLKDVP 326 (433)
T ss_pred HHHHHHHHHHHhhcc--------------c-cC---CChHHHHHHHHhhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 111111110000000 0 00 1122333333333 2 34566777778888899999998888
Q ss_pred CeEEecCCCceEEEE-EecCCC--------CCcccchH-----------HHHHHHHHH-HccCcEEEEeeeEC-CEeEEE
Q 041829 395 RFEVVTPRIFSLVCF-RLLPPH--------NDEDHGNK-----------LNHKLLDDI-NSTGKIFISHTVLS-GKYILR 452 (486)
Q Consensus 395 ~~~~~~~~~~~~v~f-~~~~~~--------~~~~~~~~-----------~~~~l~~~l-~~~g~~~~~~~~~~-~~~~lR 452 (486)
++.+. +|..+++.| ++++.. .+..+..+ ...++...+ .+.|..++.+..+. ....+|
T Consensus 327 ~~~~~-~p~gg~~~w~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~PG~~F~~~~~~~R 405 (433)
T PRK06855 327 GLKVN-RTNGAFYMTVVFEDGVLNNKQSLPIENPEVKEYVEGLVKGPVSPDKRFVYYLLASTGICVVPLSSFCTELNGFR 405 (433)
T ss_pred Ceecc-CCCeeEEEeeccccccccccccCCcchhhhHHHHHHHHhcCCCchHHHHHHHHHHcCEEEecCCcCCCCCCceE
Confidence 87654 566555544 443210 00000000 123444444 45564444444442 224699
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 453 FAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 453 i~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+++++ .+.+++++.++.|.+++++..
T Consensus 406 ls~~~--~~~~~i~~~~~~l~~~~~~~~ 431 (433)
T PRK06855 406 VTLLE--RDEEKFEWIYQTLAEKIEEYL 431 (433)
T ss_pred EEECC--CcHHHHHHHHHHHHHHHHHHh
Confidence 99943 478999999999999887644
No 200
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.80 E-value=1.9e-17 Score=167.28 Aligned_cols=239 Identities=17% Similarity=0.160 Sum_probs=163.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|....+|++ ++++.|.+. .+++++|+.|+..++.+... +++.|+++...|....
T Consensus 61 ~~p~~~~le~~----lA~l~g~~~---------al~~~SG~~Ai~~al~all~-----------pGd~VIv~~~~y~~t~ 116 (427)
T PRK05994 61 TNPTNAVLEER----VAALEGGTA---------ALAVASGHAAQFLVFHTLLQ-----------PGDEFIAARKLYGGSI 116 (427)
T ss_pred CCccHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHHHHHhC-----------CCCEEEEecCcchhHH
Confidence 45667778887 899998764 68899999999888766533 6778888888887544
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+...|+ +++.++.+ |++++++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 117 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~ai~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~ 180 (427)
T PRK05994 117 NQFGHAFKSFGW---QVRWADAD-------DPASFERAITPR------TKAIFIESIANPGGTVTDIAAIAEVAHRAGLP 180 (427)
T ss_pred HHHHHHHHhcCc---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3 4566788 88877642 888999988653 35788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCch-HHHHHhcCCcccccccccccCCc--
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRN-TLIQSLSTNPEFLKNKASQANMV-- 341 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~-~~~~~~~~~~~yl~~~~~~~~~~-- 341 (486)
+++|++++.+...-+ .. .++|.++.+.||+++++.+ .|.+++.... .+.. ....+++.......++.
T Consensus 181 livD~a~a~~~~~~p-l~------~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~--~k~~~~~~~~~~~~~~~~~ 251 (427)
T PRK05994 181 LIVDNTLASPYLIRP-IE------HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSK--SGKYPMLSEPRPEYHGLVL 251 (427)
T ss_pred EEEECCccccccCCc-cc------cCCcEEEEcCccccCCCCCcEEEEEEeCCcccccc--ccccccccCCcchhhhhhH
Confidence 999999986543211 11 2799999999999998754 4555553221 1110 00001111100000000
Q ss_pred cC-CC----------CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 342 VD-YK----------DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 342 ~~-~~----------~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.+ +. ......|.....+.+|..++ |.+.+..++++..++|.++.+.|+++|+++-+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~--~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v 318 (427)
T PRK05994 252 HETFGNFAFAIAARVLGLRDLGPAISPFNAFLILT--GIETLPLRMQRHSDNALAVAEWLKGHPKVSWV 318 (427)
T ss_pred HHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 00 00 00112344455667776665 66788999999999999999999999998644
No 201
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.80 E-value=2.2e-17 Score=164.04 Aligned_cols=232 Identities=19% Similarity=0.241 Sum_probs=165.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH-
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL- 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (486)
..|...+||+. ++++.|.+. .++++||+.++..++ .... +++.|+++...+.+.
T Consensus 50 ~~pt~~~le~~----la~l~g~~~---------~~~~~sG~~ai~~~~-~ll~-----------~Gd~Vl~~~~~y~~t~ 104 (366)
T PRK08247 50 GNPTRGVLEQA----IADLEGGDQ---------GFACSSGMAAIQLVM-SLFR-----------SGDELIVSSDLYGGTY 104 (366)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHH-HHhC-----------CCCEEEEecCCcCcHH
Confidence 45677788888 999999865 588888888776543 2221 567788888777653
Q ss_pred ---HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 189 ---QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 189 ---~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
...+...|+ +++.++. .|+++|++++++. +.+|+++.++|++|.+.++++|+++|+++|++
T Consensus 105 ~~~~~~~~~~G~---~v~~vd~-------~d~~~l~~~i~~~------tklv~le~P~NP~~~~~dl~~I~~la~~~g~~ 168 (366)
T PRK08247 105 RLFEEHWKKWNV---RFVYVNT-------ASLKAIEQAITPN------TKAIFIETPTNPLMQETDIAAIAKIAKKHGLL 168 (366)
T ss_pred HHHHHHhhccCc---eEEEECC-------CCHHHHHHhcccC------ceEEEEECCCCCCCcHHHHHHHHHHHHHcCCE
Confidence 345556788 8887764 3889999988654 35888899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|.+|+......| .. .++|.++.+++|+++++.+ .|++..++.....+ +.....+
T Consensus 169 lIvD~t~~~~~~~~p-~~------~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~-~~~~~~~------------- 227 (366)
T PRK08247 169 LIVDNTFYTPVLQRP-LE------EGADIVIHSATKYLGGHNDVLAGLVVAKGQELCER-LAYYQNA------------- 227 (366)
T ss_pred EEEECCCccccccCc-hh------cCCcEEEeecceeccCCCceeeeEEecChHHHHHH-HHHHHHh-------------
Confidence 999999965443222 11 2689999999999987654 56666554433222 1110000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEec
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLL 412 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~ 412 (486)
.+.....+..|..++ |.+.+..++++..++++.+.+.|+++|++..+. |+..++++|.+.
T Consensus 228 -------~g~~~s~~~a~l~~~--~l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~~gg~~sf~~~ 288 (366)
T PRK08247 228 -------AGAVLSPFDSWLLIR--GMKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPGRGGMLSFRLQ 288 (366)
T ss_pred -------cCCCCChHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCCcCcEEEEEEC
Confidence 011122345666665 445677888889999999999999999987544 447889999874
No 202
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.80 E-value=4.7e-17 Score=162.55 Aligned_cols=289 Identities=11% Similarity=0.048 Sum_probs=190.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
.+++++ +++++|.+++ ..++|+|+++++...+.+... +++.|+++...|..+...++.
T Consensus 70 ~~lr~~----ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~l~~-----------~gd~vl~~~p~y~~~~~~~~~ 127 (367)
T PRK02731 70 FELKAA----LAEKFGVDPE-------RIILGNGSDEILELLARAYLG-----------PGDEVIYSEHGFAVYPIAAQA 127 (367)
T ss_pred HHHHHH----HHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEecCCHHHHHHHHHH
Confidence 445555 7888888654 578888888765554443321 567788888888877778888
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEeeccc
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVDAAY 272 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD~A~ 272 (486)
.|+ +++.+|.+ ++.+|+++|++++++. +.+|+++.++|+||.+-|.+++.++|+.+ |+++++|++|
T Consensus 128 ~g~---~~~~~~~~---~~~~~~~~l~~~~~~~------~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y 195 (367)
T PRK02731 128 VGA---KPVEVPAK---DYGHDLDAMLAAVTPR------TRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAY 195 (367)
T ss_pred cCC---eEEEeccc---CCCCCHHHHHHHhCCC------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcH
Confidence 899 99999884 3689999999988632 45788899999999999999999999875 8999999998
Q ss_pred cchhccCccchhcccCCc-CCC-ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 273 AGSACICPEYRQYIDGVE-EAD-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~-~aD-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
..+......... +...+ .-+ .++.+..|.++.| ..+|+++..+ +... .+...... +
T Consensus 196 ~~~~~~~~~~~~-~~~~~~~~~~i~~~S~SK~~g~~G~RiG~l~~~~-~~~~-~l~~~~~~----------------~-- 254 (367)
T PRK02731 196 AEYVRRKDYEDG-LELVAKFPNVVVTRTFSKAYGLAGLRVGYGIAPP-EIID-ALNRVRQP----------------F-- 254 (367)
T ss_pred HHhccCcCcccH-HHHHhhcCCEEEEeeehHhhcCcccceeeeeCCH-HHHH-HHHHccCC----------------C--
Confidence 764431111100 01011 112 4455678987644 4578887654 3222 22211000 0
Q ss_pred CCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHH
Q 041829 350 PLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKL 428 (486)
Q Consensus 350 ~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l 428 (486)
. ...+..+++...+. .+.+++..++..++.+.+.+.|++. ++.+. ++..+++++++.. . ....++
T Consensus 255 ~----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~g~~~~i~~~~-~-------~~~~~~ 320 (367)
T PRK02731 255 N----VNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL-GLEYI-PSVGNFILVDFDD-G-------KDAAEA 320 (367)
T ss_pred C----CCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCceEEEEECCC-C-------CCHHHH
Confidence 0 12334455555543 3446677777788889999999987 77765 5566777777632 1 112567
Q ss_pred HHHHHccCcEEEEee-eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 429 LDDINSTGKIFISHT-VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 429 ~~~l~~~g~~~~~~~-~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+.|.+.| +.+.+. .+...+++|+++ + +.+++++++++|+++.+
T Consensus 321 ~~~L~~~g-I~v~~~~~~~~~~~iRis~-~---~~~e~~~l~~aL~~~~~ 365 (367)
T PRK02731 321 YQALLKRG-VIVRPVAGYGLPNALRITI-G---TEEENRRFLAALKEFLA 365 (367)
T ss_pred HHHHHHCC-EEEEeCCCCCCCCeEEEec-C---CHHHHHHHHHHHHHHHh
Confidence 77787777 445443 232245899998 3 68899999999988753
No 203
>PRK08175 aminotransferase; Validated
Probab=99.80 E-value=2.2e-16 Score=159.12 Aligned_cols=334 Identities=12% Similarity=0.063 Sum_probs=207.2
Q ss_pred HHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 90 AGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
+.....+.....+.....|....+..++.+.+.+|+.+.+|.+.+. ....++|+|+++++...+.....
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~----~~~i~~t~G~~~~l~~~~~~~~~------- 113 (395)
T PRK08175 45 PHIVEKLCEVAQRPDTHGYSTSRGIPRLRRAISRWYQDRYDVDIDP----ESEAIVTIGSKEGLAHLMLATLD------- 113 (395)
T ss_pred HHHHHHHHHHHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCC----CCcEEEccCcHHHHHHHHHHhCC-------
Confidence 3333443333323333456666678899999999999888764320 01478888888877665543322
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|++++.+|......++.+|+ +++.+|++.+ ..++++|++++++.. ..+.+|+++.++|+||.+
T Consensus 114 ----~gd~Vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~---~~~~~~l~~~l~~~~---~~~~~v~i~~p~NPtG~~ 180 (395)
T PRK08175 114 ----HGDTVLVPNPSYPIHIYGAVIAGA---QVRSVPLVEG---VDFFNELERAIRESY---PKPKMMILGFPSNPTAQC 180 (395)
T ss_pred ----CCCEEEEcCCCCcchHHHHHHcCC---eEEEEecccC---CCcHHHHHHHHhhcc---CCceEEEEeCCCCCCCCC
Confidence 677899999999988888899999 9999999864 345888988886421 124678888899999998
Q ss_pred CCh---HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC-CC--ceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 250 DPL---LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE-AD--SFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 250 d~l---~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~-aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
-+. ++|+++|+++|+++++|.+|+.+... +.....+..+.. .| ..+.++.|.++.| ..+|+++. +++...
T Consensus 181 ~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~-~~~~~~~~~~~~~~~~~i~~~S~SK~~g~pGlRiG~~~~-~~~l~~- 257 (395)
T PRK08175 181 VELEFFEKVVALAKRYDVLVVHDLAYADIVYD-GWKAPSIMQVPGAKDVAVEFFTLSKSYNMAGWRIGFMVG-NPELVS- 257 (395)
T ss_pred CCHHHHHHHHHHHHHcCcEEEEecchHhhccC-CCCCcchhcCCCcccCEEEEeeccccccCcchhheeeeC-CHHHHH-
Confidence 776 79999999999999999999764431 111011111111 23 4467889999765 34677754 444333
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.+.....+... +........+...+.. +...++++.++..++.+++.+.|+++ ++.+..+.
T Consensus 258 ~~~~~~~~~~~-----------------~~~~~~q~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~p~ 318 (395)
T PRK08175 258 ALARIKSYHDY-----------------GTFTPLQVAAIAALEG-DQQCVRDIAEQYKRRRDVLVKGLHEA-GWMVEMPK 318 (395)
T ss_pred HHHHHHhhccc-----------------CCCcHHHHHHHHHHhC-cHHHHHHHHHHHHHHHHHHHHHHHHc-CCcccCCC
Confidence 22211111100 0001111122222221 24456667777788889999999988 77765344
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
....+++++...- .. . ...++..++.+ .| +.+.+. .+ .+..++|+++ . .+++.+...++.|.+++++
T Consensus 319 ~g~~i~i~l~~~~-~~--~--~~~~~~~~l~~~~g-v~v~p~~~f~~~~~~~lRis~-~--~~~~~~~~al~~l~~~l~~ 389 (395)
T PRK08175 319 ASMYVWAKIPEPY-AA--M--GSLEFAKKLLNEAK-VCVSPGIGFGDYGDTHVRFAL-I--ENRDRIRQAIRGIKAMFRA 389 (395)
T ss_pred EEEEEEEECCccc-CC--C--CHHHHHHHHHHhCC-EEEeCchhhCcCCCCeEEEEe-C--CCHHHHHHHHHHHHHHHHh
Confidence 4556666664311 00 0 12456666654 56 555543 33 2346899999 3 3788898888888877653
No 204
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.80 E-value=4e-17 Score=163.93 Aligned_cols=221 Identities=17% Similarity=0.144 Sum_probs=158.8
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH-
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL- 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~- 188 (486)
.+|...++|+. +++++|.+. .+++++|+.|+..++.+... +++.|+++...|...
T Consensus 63 ~~p~~~~le~~----lA~l~g~~~---------~i~~~sG~~Al~~~l~~ll~-----------~Gd~Viv~~~~y~~t~ 118 (403)
T PRK07503 63 SNPTLALLEQR----MASLEGGEA---------AVALASGMGAITATLWTLLR-----------PGDEVIVDQTLYGCTF 118 (403)
T ss_pred CCchHHHHHHH----HHHHhCCCc---------EEEEcCHHHHHHHHHHHHcC-----------CCCEEEEccCccchHH
Confidence 56777888887 899999764 57888899887777654322 677788888777543
Q ss_pred ---HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 189 ---QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 189 ---~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
...+...|+ +++.++.+ |+++|++++++. +.+|++..++|++|.+.|+++|+++|+++|++
T Consensus 119 ~~~~~~~~~~G~---~v~~vd~~-------d~~~l~~~i~~~------tklV~le~p~NPtG~~~di~~I~~la~~~gi~ 182 (403)
T PRK07503 119 AFLHHGLGEFGV---TVRHVDLT-------DPAALKAAISDK------TRMVYFETPANPNMRLVDIAAVAEIAHGAGAK 182 (403)
T ss_pred HHHHHHHhhCCE---EEEEeCCC-------CHHHHHHhcCcc------CcEEEEeCCCCCCCeeeCHHHHHHHHHHcCCE
Confidence 344566788 77777653 789999988654 34788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
+++|++|+.+... ... + .++|.++.+++|+++++.+ +|+++ .+++...+........
T Consensus 183 lIvD~a~a~~~~~-~~l-----~-~g~Di~v~S~tK~l~g~gd~~gG~v~-~~~~l~~~l~~~~~~~------------- 241 (403)
T PRK07503 183 VVVDNTYCTPYLQ-RPL-----E-LGADLVVHSATKYLGGHGDITAGLVV-GGKALADRIRLEGLKD------------- 241 (403)
T ss_pred EEEECCCcccccC-Cch-----h-hCCCEEEccccccccCCCceeEEEEE-cCHHHHHHHHhhhHHh-------------
Confidence 9999999765322 111 1 1689999999999998754 66665 5554333221000000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
..+-....+.+|..++ |.+.+..++++..+++..+.+.|+++|.++.+
T Consensus 242 ------~~g~~~s~~~a~l~l~--~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V 289 (403)
T PRK07503 242 ------MTGAVMSPFDAFLLMR--GLKTLALRMDRHCASAQAVAEWLARHPAVELV 289 (403)
T ss_pred ------CcCCCCCHHHHHHHHc--CcchHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 0122334556666665 56777888899999999999999999988654
No 205
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.80 E-value=3.9e-17 Score=147.00 Aligned_cols=297 Identities=13% Similarity=0.135 Sum_probs=204.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
+.+-+.+...++++.+-++ .++..++-.||.-++.+... +++.|+.++..|.|+....++
T Consensus 111 q~iHk~LE~kiAqfh~rED---------~ilypscfdANag~feail~-----------pedAvfSDeLNhASIIdGirL 170 (417)
T KOG1359|consen 111 QDIHKLLESKIAQFHGRED---------TILYPSCFDANAGAFEAILT-----------PEDAVFSDELNHASIIDGIRL 170 (417)
T ss_pred hHHHHHHHHHHHHHhCCCc---------eEEeccccccchHHHHHhcC-----------hhhhhhccccccchhhhhhHH
Confidence 4445555555999998765 68888888888777665544 778899888999999988776
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
+.- ..++|+-.|+..+.+.-+. +-++|+.....++.|.+.|+++|.+++++||+.+.+|.||+-
T Consensus 171 ckr--------------y~h~dv~~l~~~l~~a~k~--r~klv~TDg~FSMDGdiaPl~ei~~La~kYgaLlfiDecHaT 234 (417)
T KOG1359|consen 171 CKR--------------YRHVDVFDLEHCLISACKM--RLKLVVTDGVFSMDGDIAPLEEISQLAKKYGALLFIDECHAT 234 (417)
T ss_pred Hhh--------------hccchhHHHHHHHHHhhhh--eEEEEEecceeccCCCcccHHHHHHHHHhcCcEEEEeecccc
Confidence 642 2377888899887754332 235677677789999999999999999999999999999986
Q ss_pred hhccCccch---hcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhc-CCcccccccccccCCccCCCCCccC
Q 041829 275 SACICPEYR---QYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLS-TNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 275 ~~~~~~~~~---~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~-~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
+++ .+..+ ..+.-...+|.+.....|.+++. .|.+....+. +...++ ...+|++...- .
T Consensus 235 gf~-G~tGrGt~E~~~vm~~vdiinsTLgKAlGga--~GGyttgp~~-li~llrqr~RpylFSnsl-------------p 297 (417)
T KOG1359|consen 235 GFF-GETGRGTAEEFGVMGDVDIINSTLGKALGGA--SGGYTTGPKP-LISLLRQRSRPYLFSNSL-------------P 297 (417)
T ss_pred eee-cCCCCChHHHhCCCCcceehhhhhhhhhcCC--CCCCccCChh-HHHHHHhcCCceeecCCC-------------C
Confidence 543 22221 12222347899988889988754 2333333433 333443 45688876431 1
Q ss_pred CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLD 430 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~ 430 (486)
.+--..+.+++..+.. -...+.+...+.+++++.++.. ||.+.... .++..+.+. ...+..+..+
T Consensus 298 pavV~~a~ka~dllm~-----s~~~i~~~~a~~qrfr~~me~a-GftIsg~~-hPI~pv~lG--------da~lA~~~ad 362 (417)
T KOG1359|consen 298 PAVVGMAAKAYDLLMV-----SSKEIQSRQANTQRFREFMEAA-GFTISGAS-HPICPVMLG--------DARLASKMAD 362 (417)
T ss_pred hhhhhhhHHHHHHHHh-----hHHHHHHHHHHHHHHHHHHHhc-CceecCCC-CCccceecc--------cHHHHHHHHH
Confidence 1111123344444322 1456677788899999999886 99987533 334433333 2456677888
Q ss_pred HHHccCcEEEE---eeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 431 DINSTGKIFIS---HTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 431 ~l~~~g~~~~~---~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.|.++|..++. |....|+..+|+.+ +...|+||||++++++.++.+.+.
T Consensus 363 ~lLk~Gi~Vigfs~PvVP~gkariRVqi-SAaHt~edid~~i~Af~~vgr~~~ 414 (417)
T KOG1359|consen 363 ELLKRGIYVIGFSYPVVPKGKARIRVQI-SAAHTEEDIDRLIEAFSEVGRFLN 414 (417)
T ss_pred HHHhcCceEEeecCCcCCCCceEEEEEE-ehhcCHHHHHHHHHHHHHHHHhhc
Confidence 89999965544 33557888999999 888899999999999999887543
No 206
>PRK05939 hypothetical protein; Provisional
Probab=99.80 E-value=8.5e-18 Score=167.98 Aligned_cols=253 Identities=15% Similarity=0.119 Sum_probs=167.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch---
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS--- 186 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~--- 186 (486)
..|....+|++ ++++.|... .+++++|+.|+..++.+... +++.|+++...|.
T Consensus 45 g~p~~~~lE~~----la~leg~~~---------~v~~ssG~~Ai~~~l~all~-----------~Gd~Vv~~~~~y~~t~ 100 (397)
T PRK05939 45 GTPTTAALEAK----ITKMEGGVG---------TVCFATGMAAIAAVFLTLLR-----------AGDHLVSSQFLFGNTN 100 (397)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHHcC-----------CCCEEEECCCccccHH
Confidence 56888899999 899998765 57777788887777655432 6778888887764
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
++...+...|+ +++.++. .|+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|+++
T Consensus 101 ~~~~~l~~~G~---~v~~v~~-------~d~e~l~~~l~~~------tklV~vesp~NptG~v~dl~~I~~la~~~gi~l 164 (397)
T PRK05939 101 SLFGTLRGLGV---EVTMVDA-------TDVQNVAAAIRPN------TRMVFVETIANPGTQVADLAGIGALCRERGLLY 164 (397)
T ss_pred HHHHHHHhcCC---EEEEECC-------CCHHHHHHhCCCC------CeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEE
Confidence 34456667788 8888875 3889999988654 458889999999999999999999999999999
Q ss_pred EeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-ceEEEEeCch-HHHHHhcCCcccccccccccCCccCC
Q 041829 267 HVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-CSALWVKDRN-TLIQSLSTNPEFLKNKASQANMVVDY 344 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-~g~l~~r~~~-~~~~~~~~~~~yl~~~~~~~~~~~~~ 344 (486)
+||++|+.+..+-+. . -++|.+..+.||+++++.. .|.+++.+.. ...........|...... .......
T Consensus 165 ivD~t~a~~~~~~~~--~-----~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 236 (397)
T PRK05939 165 VVDNTMTSPWLFRPK--D-----VGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQ-QWGLTQI 236 (397)
T ss_pred EEECCcccccccCcc--c-----cCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchh-hHHHHHH
Confidence 999999765432111 1 1799999999999997643 2333332211 000000000011000000 0000000
Q ss_pred C-CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 345 K-DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 345 ~-~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
. ......|....+...|..++ |.+.+..+++++.++|..+.+.|+++|.++-+.-| ..++
T Consensus 237 ~~~~~~~~G~~~~p~~a~l~~r--gl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l 314 (397)
T PRK05939 237 RKKGLRDMGATLSSEAAHRIAI--GAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGL 314 (397)
T ss_pred HHHHHHhcCCCCCHHHHHHHHc--CcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceE
Confidence 0 00001233345566676664 77889999999999999999999999987543211 2458
Q ss_pred EEEEec
Q 041829 407 VCFRLL 412 (486)
Q Consensus 407 v~f~~~ 412 (486)
++|.+.
T Consensus 315 ~sf~~~ 320 (397)
T PRK05939 315 LSFELA 320 (397)
T ss_pred EEEEeC
Confidence 888886
No 207
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=99.80 E-value=3.6e-17 Score=162.89 Aligned_cols=236 Identities=17% Similarity=0.156 Sum_probs=167.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. ++++.|.+ .+++++||++|+..++.+... +++.|+++...|.+..
T Consensus 49 ~~p~~~~le~~----lA~l~g~~---------~v~~~~gg~~Ai~~~l~all~-----------~GD~Vl~~~p~y~~~~ 104 (382)
T TIGR02080 49 GNPTRDLLQQA----LAELEGGA---------GAVVTNTGMSAIHLVTTALLG-----------PDDLLVAPHDCYGGTY 104 (382)
T ss_pred CCchHHHHHHH----HHHHhCCC---------cEEEEcCHHHHHHHHHHHHcC-----------CCCEEEEcCCCcHHHH
Confidence 45666777777 89998842 389999999988777765432 6778888988887655
Q ss_pred HHHHH-hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 190 KACQI-GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~-~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
..+.. .+.+.-++..++ ..|++++++++++. +.+|+++.++|++|.+-|+++|+++|+++|++++|
T Consensus 105 ~~~~~~~~~~~~~v~~~d-------~~d~~~l~~ai~~~------tklV~l~~p~NPtG~~~dl~~I~~la~~~g~~vvv 171 (382)
T TIGR02080 105 RLLNALAKKGCFRVLFVD-------QGDEQALRAALAQK------PKLVLIETPSNPLLRVVDIAKICHLAKAVGAVVVV 171 (382)
T ss_pred HHHHHHHhhcCeEEEEEC-------CCCHHHHHHhcCcC------ceEEEEECCCCCCCEecCHHHHHHHHHHcCCEEEE
Confidence 44332 322110444442 23889999988653 45888999999999999999999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
|++|+.+....+ .. .++|.++.+++||++++.+ .|++..+++....+. .....+
T Consensus 172 D~a~~~~~~~~p-l~------~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l-~~~~~~---------------- 227 (382)
T TIGR02080 172 DNTFLSPALQNP-LA------LGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEEL-AWWANN---------------- 227 (382)
T ss_pred ECCCcccccCCc-hh------hCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHH-HHHHHc----------------
Confidence 999976543221 11 1689999999999988765 777777776543321 111111
Q ss_pred CccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceEEEE
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSLVCF 409 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~v~f 409 (486)
.|.....+..|..++ |.+.+..++++..+++..+.++|+++|.++-+.-| ..++++|
T Consensus 228 ----~g~~~sp~~a~l~lr--~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~ 301 (382)
T TIGR02080 228 ----LGVTGGAFDSYLTLR--GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSF 301 (382)
T ss_pred ----cCCCCCHHHHHHHHc--ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEE
Confidence 122234566777765 56788888999999999999999999988754321 1358899
Q ss_pred Eec
Q 041829 410 RLL 412 (486)
Q Consensus 410 ~~~ 412 (486)
.+.
T Consensus 302 ~~~ 304 (382)
T TIGR02080 302 ELK 304 (382)
T ss_pred Eec
Confidence 885
No 208
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.80 E-value=2.8e-17 Score=163.55 Aligned_cols=285 Identities=16% Similarity=0.204 Sum_probs=189.8
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
...|....||+. ++++.|.+. .+++++|+.|+..++ .+.. +++.|+++...|.+.
T Consensus 47 ~~~p~~~~Le~~----la~l~g~~~---------al~~~SG~~Al~~~l-~~l~-----------pGd~Vi~~~~~y~~t 101 (380)
T PRK06176 47 SGNPTRFALEEL----IADLEGGVK---------GFAFASGLAGIHAVF-SLFQ-----------SGDHVLLGDDVYGGT 101 (380)
T ss_pred CCChhHHHHHHH----HHHHhCCCC---------EEEECCHHHHHHHHH-HHcC-----------CCCEEEEcCCChhHH
Confidence 356778888888 899998654 577788887765433 3222 677888888877654
Q ss_pred H----HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 189 Q----KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 189 ~----~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
. ..+...|+ +++.++. .|+++++++++++ +.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 102 ~~~~~~~~~~~gi---~v~~vd~-------~d~e~l~~ai~~~------t~lV~lesP~Nptg~~~di~~I~~la~~~gi 165 (380)
T PRK06176 102 FRLFDKVLVKNGL---SCTIIDT-------SDLSQIKKAIKPN------TKALYLETPSNPLLKITDLAQCASVAKDHGL 165 (380)
T ss_pred HHHHHHHHHhcCe---EEEEcCC-------CCHHHHHHhcCcC------ceEEEEECCCCCCceecCHHHHHHHHHHcCC
Confidence 3 34555677 7776653 3899999888654 3578889999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
+++||++|+......| . . .++|.+++++||++++|.. .|+++.+++....+. . .+..
T Consensus 166 ~vivD~t~a~~~~~~p-~-----~-~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~-~----~~~~--------- 224 (380)
T PRK06176 166 LTIVDNTFATPYYQNP-L-----L-LGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEI-A----FFQN--------- 224 (380)
T ss_pred EEEEECCccccccCCc-c-----c-cCCCEEEecCceeccCCccceeeEEEecHHHHHHHH-H----HHHH---------
Confidence 9999999986433211 1 1 2799999999999998864 666766665432221 1 0100
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Cce
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFS 405 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~ 405 (486)
..+........|..++ |.+.+..++++..+++..+.+.|+++|.++-+.-| ..+
T Consensus 225 -------~~G~~~~~~~~~l~~~--gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~ 295 (380)
T PRK06176 225 -------AIGGVLGPQDSWLLQR--GIKTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSG 295 (380)
T ss_pred -------HhcCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCce
Confidence 0111223345565554 66778889999999999999999999988654322 135
Q ss_pred EEEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeee-----E-------CC--EeEEEEEecCCCCCH
Q 041829 406 LVCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTV-----L-------SG--KYILRFAVGAPLTEW 462 (486)
Q Consensus 406 ~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~-----~-------~~--~~~lRi~~~~~~~t~ 462 (486)
+++|.+.. .+...++++.|.-- |. ....+.. . .| .+.+|+|+ --
T Consensus 296 ~~s~~~~~--------~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv-----Gl 362 (380)
T PRK06176 296 MLSFTLKN--------DSEAVAFVESLKLFILGESLGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSV-----GI 362 (380)
T ss_pred EEEEEECC--------HHHHHHHHHcCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEe-----cc
Confidence 88888853 12334566655421 11 1111110 0 11 35899999 34
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKAS 477 (486)
Q Consensus 463 ~di~~~~~~l~~~~~ 477 (486)
||++.+++.|++..+
T Consensus 363 E~~~dli~dl~~Al~ 377 (380)
T PRK06176 363 EHEQDLLEDLEQAFA 377 (380)
T ss_pred CCHHHHHHHHHHHHh
Confidence 567777777776654
No 209
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.79 E-value=4e-17 Score=162.73 Aligned_cols=283 Identities=16% Similarity=0.202 Sum_probs=179.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEE-cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVI-QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
.++++. +++++|.+++ ..++ ++|+++++..++.+... +++.|+++...+..+...++
T Consensus 72 ~~lr~~----ia~~~~~~~~-------~i~~~~~Ga~~~i~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~ 129 (361)
T PRK00950 72 PELREA----LSKYTGVPVE-------NIIVGGDGMDEVIDTLMRTFID-----------PGDEVIIPTPTFSYYEISAK 129 (361)
T ss_pred HHHHHH----HHHHhCCCHH-------HEEEeCCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHH
Confidence 455555 7777888664 4677 55656655554443322 56778888888877888889
Q ss_pred HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecccc
Q 041829 194 IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
..|+ +++.+|.+. +|.+|+++|+++++.. +.+|+++.++|+||.+-|++++.++|+++|+++++|++|+
T Consensus 130 ~~g~---~~~~~~~~~--~~~~~~~~l~~~~~~~------~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~li~De~y~ 198 (361)
T PRK00950 130 AHGA---KPVYAKREE--DFSLDVDSVLNAITEK------TKVIFLCTPNNPTGNLIPEEDIRKILESTDALVFVDEAYV 198 (361)
T ss_pred HcCC---EEEEeecCC--CCCcCHHHHHHHhccC------CCEEEEeCCCCCCCCCcCHHHHHHHHHHCCcEEEEECchh
Confidence 9999 999998653 4689999999988542 3467778999999999999999999999999999999997
Q ss_pred chhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCC
Q 041829 274 GSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLG 352 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~s 352 (486)
.+. ...........+. -.+..++.|.++.| ...|+++..+ ............+ .
T Consensus 199 ~~~--~~~~~~~~~~~~~-vi~~~S~SK~~g~~GlRiG~~~~~~-~~~~~~~~~~~~~-----------------~---- 253 (361)
T PRK00950 199 EFA--EYDYTPLALEYDN-LIIGRTFSKVFGLAGLRIGYGFVPE-WLIDYYMRAKTPF-----------------S---- 253 (361)
T ss_pred hhC--ccchHHHHHhcCC-EEEEEeehHhhcCchhhcchhcCCH-HHHHHHHHhcCCC-----------------C----
Confidence 643 1112222111111 13445788988755 3467776543 3222211111111 0
Q ss_pred CCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHH
Q 041829 353 RRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDD 431 (486)
Q Consensus 353 r~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~ 431 (486)
...+....+...+. .+.+++..++..++++++.+.|. +.+. ++..+.+.+++.. . ...++.+.
T Consensus 254 --~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~l~----~~~~-~~~~~~i~~~~~~-------~--~~~~~~~~ 317 (361)
T PRK00950 254 --LTRLSQAAAIAALSDKEYIEKSIEHGIKSREYLYNELP----FKVY-PSEANFVLVDVTP-------M--TAKEFCEE 317 (361)
T ss_pred --CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhhcC----eeEC-CCcceEEEEECCC-------C--CHHHHHHH
Confidence 11233334444432 23355666666666666666654 4443 4555666666632 1 12567777
Q ss_pred HHccCcEEEEe-eeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 432 INSTGKIFISH-TVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 432 l~~~g~~~~~~-~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
|.+.| +.+.+ ..+. +..++|+++ + +.+++++++++|+++.
T Consensus 318 l~~~g-v~v~~~~~f~~~~~~~lRis~-~---~~~~~~~l~~~L~~il 360 (361)
T PRK00950 318 LLKRG-VIVRDCTSFRGLGDYYIRVSI-G---TFEENERFLEILKEIV 360 (361)
T ss_pred HHHCC-EEEeeCCccCCCCCCeEEEEC-C---CHHHHHHHHHHHHHHh
Confidence 77777 44443 3332 346899998 3 6789999999998764
No 210
>PRK09148 aminotransferase; Validated
Probab=99.79 E-value=2.1e-16 Score=159.67 Aligned_cols=326 Identities=10% Similarity=0.027 Sum_probs=204.0
Q ss_pred HHHhcCc-CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCC-CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCC
Q 041829 97 LSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQG-GGVIQGTASEAVLVVLLAARDKALKRVGKNSLE 174 (486)
Q Consensus 97 l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~-~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~ 174 (486)
+...++. ....|....+..++.+.+.+|+.+.+|.+.. .. ..++|+|+++++..++.+... +
T Consensus 52 ~~~~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~-----~~~~I~it~G~~~al~~~~~~l~~-----------~ 115 (405)
T PRK09148 52 LCETAQDPRTHRYSASKGIPGLRRAQAAYYARRFGVKLN-----PDTQVVATLGSKEGFANMAQAITA-----------P 115 (405)
T ss_pred HHHHHcCcccCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----CCCcEEEcCChHHHHHHHHHHhcC-----------C
Confidence 4444432 2345555567789999999999888786422 11 489999999988777665433 6
Q ss_pred CeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCCh--
Q 041829 175 KLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPL-- 252 (486)
Q Consensus 175 ~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l-- 252 (486)
++.|+++..++..+...++..|+ +++.+|++.++.+ +++++++++... .++.+|+.+.|+|+||.+-+.
T Consensus 116 gd~Vl~~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~---~~~l~~~~~~~~---~~~~~v~l~~P~NPtG~~~s~~~ 186 (405)
T PRK09148 116 GDVILCPNPSYPIHAFGFIMAGG---VIRSVPAEPDEEF---FPALERAVRHSI---PKPIALIVNYPSNPTAYVADLDF 186 (405)
T ss_pred CCEEEEcCCCCcccHHHHHhcCC---EEEEEeCCCCCCC---ccCHHHHHhhcc---ccceEEEEeCCCCCCCcCCCHHH
Confidence 77898999999999888899999 9999999765433 445555554321 135688899999999999775
Q ss_pred -HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC---CCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC
Q 041829 253 -LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE---ADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 253 -~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~---aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~ 327 (486)
++|.++|+++|+++++|.+|+.+....... ..+..+.. ...+..++.|.++.| .-+|+++. ++..+. .+...
T Consensus 187 l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~-~s~~~~~~~~~~~i~~~SfSK~~~~pGlR~G~~v~-~~~~i~-~l~~~ 263 (405)
T PRK09148 187 YKDVVAFAKKHDIIILSDLAYSEIYFDGNPP-PSVLQVPGAKDVTVEFTSMSKTFSMAGWRMGFAVG-NERLIA-ALTRV 263 (405)
T ss_pred HHHHHHHHHHcCeEEEEeccchhhhcCCCCC-CChhhCCCccCcEEEEeccccccCCcchheeeeeC-CHHHHH-HHHHH
Confidence 688899999999999999998654321111 11111111 223467789999855 45788764 443332 22211
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh--ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY--GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS 405 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~--g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 405 (486)
..++.. ....+...++...+ +.+.+++..++..++.+++.+.|+++ ++.+. +|..+
T Consensus 264 ~~~~~~--------------------~~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~p~~g 321 (405)
T PRK09148 264 KSYLDY--------------------GAFTPIQVAATAALNGPQDCIAEMRELYKKRRDVLVESFGRA-GWDIP-PPAAS 321 (405)
T ss_pred HHHhcc--------------------CCChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHc-CCccC-CCCee
Confidence 111100 00112222223333 24556677777888899999999886 67654 44444
Q ss_pred -EEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 406 -LVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 406 -~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.+.+++++.. . ..+ ..++...+. +.|..+..+..+. +..++|+++ . .+.+++++.++.|.++.+++.
T Consensus 322 ~f~~~~l~~~~-~--~~~--~~~~~~~ll~~~gV~v~pg~~f~~~~~~~~Ri~~-~--~~~~~l~~al~~l~~~l~~~~ 392 (405)
T PRK09148 322 MFAWAPIPEAF-R--HLG--SLEFSKLLVEKADVAVAPGVGFGEHGDGYVRIAL-V--ENEQRIRQAARNIKRFLSSAD 392 (405)
T ss_pred EEEEEECCCcc-C--CCC--HHHHHHHHHHhCCEEEeCchhhCCCCCCeEEEEe-c--CCHHHHHHHHHHHHHHHHHHH
Confidence 4444543211 0 001 245666665 4564444433332 246999999 3 368889998888888776544
No 211
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=1.2e-17 Score=165.57 Aligned_cols=287 Identities=10% Similarity=0.076 Sum_probs=188.8
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCC-eEEEecCCCchhHHHHHHHhCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEK-LVVYASDQTHSALQKACQIGGI 197 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~g~ 197 (486)
.++.+++++.+|.+.+ +.++|+|+++++..++.+... ++ +.|+++..+|..+...++..|+
T Consensus 60 ~~l~~~~a~~~g~~~~-------~I~~~~Gs~e~i~~~~~~~~~-----------~g~~~vli~~P~y~~y~~~~~~~G~ 121 (351)
T PRK01688 60 KAVIENYAAYAGVKPE-------QVLVSRGADEGIELLIRAFCE-----------PGKDAILYCPPTYGMYSVSAETIGV 121 (351)
T ss_pred HHHHHHHHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCCEEEEcCCCHHHHHHHHHHcCC
Confidence 4566669999999775 688999999988776654332 43 6788899999999999999999
Q ss_pred CCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEeeccccch
Q 041829 198 HPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVDAAYAGS 275 (486)
Q Consensus 198 g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD~A~g~~ 275 (486)
+++.+|.++ +|.+|++++++++. . +.+|+++.++|+||.+-+.+++.++++.. +.++++|+||.-+
T Consensus 122 ---~~~~v~~~~--~~~~d~~~l~~~~~-~------~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f 189 (351)
T PRK01688 122 ---EIRTVPTLD--NWQLDLPAIADNLD-G------VKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEF 189 (351)
T ss_pred ---EEEEeecCC--CCCCCHHHHHHhcc-C------CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhc
Confidence 999999875 47999999998872 2 34788899999999998877777776532 6899999999654
Q ss_pred hccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC
Q 041829 276 ACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 354 (486)
... +.....+..... =.+.-++.|+++.| ..+|+++.. ++.+....+...+|- .+.
T Consensus 190 ~~~-~s~~~~~~~~~n-~iv~rSfSK~~glaGlRiGy~i~~-~~~i~~l~~~~~~~~-------------------v~~- 246 (351)
T PRK01688 190 CPQ-ASLAGWLAEYPH-LVILRTLSKAFALAGLRCGFTLAN-EEVINLLLKVIAPYP-------------------LST- 246 (351)
T ss_pred CCC-CChHHHHhhCCC-EEEEecchHhhcCHHHHHhHHhCC-HHHHHHHHhccCCCC-------------------CCH-
Confidence 311 111111111111 14556688988744 346777653 333332222212211 010
Q ss_pred CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc
Q 041829 355 FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS 434 (486)
Q Consensus 355 ~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~ 434 (486)
.....+-.++...+.+.+++.++...+.++++.+.|+++++++.+.++..+.+.+++.+ ..++.+.|.+
T Consensus 247 ~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~ps~~nfi~~~~~~-----------~~~l~~~L~~ 315 (351)
T PRK01688 247 PVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIPCVEQVFDSETNYILARFTA-----------SSAVFKSLWD 315 (351)
T ss_pred HHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------HHHHHHHHHH
Confidence 00111112222222355677777778888999999999988764556666777666531 1467778888
Q ss_pred cCcEEEEeeeE-CCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 435 TGKIFISHTVL-SGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 435 ~g~~~~~~~~~-~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
+|..+...... ...+++|+++ . +++|+++++++|+
T Consensus 316 ~gi~vr~~~~~~~~~~~iRis~-~---~~~e~~~l~~al~ 351 (351)
T PRK01688 316 QGIILRDQNKQPGLSNCLRITI-G---TREECQRVIDALR 351 (351)
T ss_pred CCeEEEECCCcCCCCCeEEEeC-C---CHHHHHHHHHhhC
Confidence 88544333322 2246899999 3 6799999999873
No 212
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.79 E-value=7.3e-17 Score=160.65 Aligned_cols=289 Identities=12% Similarity=0.094 Sum_probs=190.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
++..++++. +++.++.+.+ ..++|+|+++++..++.+..+ +++.|+++..++..+...
T Consensus 64 ~g~~~lr~~----ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~v~~~~p~y~~~~~~ 121 (359)
T PRK03158 64 GYAPELRTK----VAKHLGVDEE-------QLLFGAGLDEVIQMISRALLN-----------PGTNTVMAEPTFSQYRHN 121 (359)
T ss_pred CcHHHHHHH----HHHHhCCCHH-------HEEECCCHHHHHHHHHHHHhC-----------CCCEEEEcCCCHHHHHHH
Confidence 445556655 6777787654 588999988887655544322 677888899999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH--hCCEEEee
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS--NGMWFHVD 269 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~--~g~~lhvD 269 (486)
+...|. +++.+|++ + +.+|++++++++++. +.+|+++.++|+||.+-|.++|.++++. +|+++++|
T Consensus 122 ~~~~g~---~~~~~~~~-~--~~~d~~~l~~~~~~~------~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~D 189 (359)
T PRK03158 122 AIIEGA---EVREVPLK-D--GGHDLEAMLKAIDEQ------TKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLD 189 (359)
T ss_pred HHHcCC---eEEEEecC-C--CCcCHHHHHHhcCCC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEE
Confidence 999999 99999987 2 489999998887543 3467778999999999999999999887 59999999
Q ss_pred ccccchhccCccchhcccCCc--CCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVE--EADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~--~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
++|..+.... .....+.... .-..+..++.|.++.| ..+|+++... +.+.........|
T Consensus 190 e~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~~-~~~~~~~~~~~~~---------------- 251 (359)
T PRK03158 190 EAYYEYVTAE-DYPDTLPLLEKYENLIVLRTFSKAYGLAALRVGYGIASE-ELIEKLNIARPPF---------------- 251 (359)
T ss_pred CchHhhcCCc-ccccHHHHHHhcCCEEEEEechHhhcCcchhhehhcCCH-HHHHHHHHhcCCC----------------
Confidence 9997654321 1111111011 1235556788998755 4568876543 3332211111110
Q ss_pred CccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
....+...++...+. .+.+++..+...+..+++.+.|++. ++.+. ++..+.+.+.+.. + .
T Consensus 252 -------~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~g~~i~~~~~~--------~--~ 312 (359)
T PRK03158 252 -------NTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY-GLFYY-PSQTNFIFVDTGR--------D--A 312 (359)
T ss_pred -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCeeC-CCcCcEEEEECCC--------C--H
Confidence 012233334433332 2345566666677788888889887 77765 4455555555421 1 2
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.++.+.|.+.|..+..+..+...+++|+++ + +.+++++++++|+++
T Consensus 313 ~~~~~~l~~~gv~v~~g~~f~~~~~iRi~~-~---~~~~~~~l~~al~~~ 358 (359)
T PRK03158 313 NELFEALLKKGYIVRSGAALGFPTGVRITI-G---LKEQNDKIIELLKEL 358 (359)
T ss_pred HHHHHHHHHCCeEEeeCCCCCCCCeEEEec-C---CHHHHHHHHHHHHHh
Confidence 467777777775444433444456999998 3 789999999999875
No 213
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.79 E-value=1e-16 Score=159.42 Aligned_cols=314 Identities=11% Similarity=0.076 Sum_probs=192.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.++...++|+. +++++|.+. .++|+|||+|+..++.+..-. +++.|+++..+|.+..
T Consensus 29 ~g~~~~~~e~~----la~~~g~~~---------~v~~~sgt~aL~~~l~al~~~----------pGd~Viv~~~t~~~~~ 85 (376)
T TIGR02379 29 DGPFSRRCETW----LENRTGTKK---------ALLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTA 85 (376)
T ss_pred CcHHHHHHHHH----HHHHhCCCe---------EEEeCCHHHHHHHHHHHcCCC----------CcCEEEECCCCcHHHH
Confidence 36666677766 888888653 799999999977776543111 6788999999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.++...|+ +++.+++++++ +.+|+++|++++++.+ .+|+. ++++|...|+++|.++|+++|+++++|
T Consensus 86 ~~~~~~G~---~~v~vd~d~~~-~~~d~~~le~~i~~~t------k~Iip---~~~~G~~~d~~~I~~la~~~~i~vIeD 152 (376)
T TIGR02379 86 NAFVLRGA---KIVFVDIRPDT-MNIDETLIESAITHRT------KAIVP---VHYAGVACDMDTIMALANKHQLFVIED 152 (376)
T ss_pred HHHHHcCC---EEEEEecCCCc-CCCCHHHHHHhcCcCc------eEEEE---eCCCCCccCHHHHHHHHHHCCCEEEEE
Confidence 99999999 99999998753 7899999999987543 35553 457899999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecc--cccCCCCcceEEEEeCchHHHHHhcCCc-ccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAH--KWFLTNFDCSALWVKDRNTLIQSLSTNP-EFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~h--K~l~~p~~~g~l~~r~~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~ 346 (486)
+||+.+...... . . + ...|..++++| |.+......|++++.+++...+...... +...... .....+...
T Consensus 153 aa~~~g~~~~~~--~-~-g-~~~~~~~fSf~~~K~l~~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~~ 225 (376)
T TIGR02379 153 AAQGVMSTYKGR--A-L-G-SIGHLGTFSFHETKNYTSGGEGGALLINDQAFIERAEIIREKGTNRSQF--FRGEVDKYT 225 (376)
T ss_pred CccccCCccCCc--c-c-C-CCCCEEEEeCCCCCcCcccCCceEEEECCHHHHHHHHHHHHhCCCCccc--cccCCCcce
Confidence 999765422111 1 1 1 12354555554 5454332468888887764443321110 0000000 000000000
Q ss_pred CccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC--C-eEEec-CCC----ceEEEEEecCCCCCc
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL--R-FEVVT-PRI----FSLVCFRLLPPHNDE 418 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~--~-~~~~~-~~~----~~~v~f~~~~~~~~~ 418 (486)
....|.+++.-.+-+++-.-..+.+.+..++.++++++..+.|+.++ + .++.. ++. ...+++++...
T Consensus 226 -~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~~~y~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---- 300 (376)
T TIGR02379 226 -WRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATWQLYQDALKPLEEKGIIELPSIPNGCQHNAHMFYIKLKDE---- 300 (376)
T ss_pred -eeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHhccCCcCCeeeCCCCCCCCeeeeEEEEEEECCc----
Confidence 01122222222222222222245678888888999999999998764 2 23221 111 12334444321
Q ss_pred ccchHHHHHHHHHHHccCcEEEE---ee---e----E---CC---------EeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 419 DHGNKLNHKLLDDINSTGKIFIS---HT---V----L---SG---------KYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 419 ~~~~~~~~~l~~~l~~~g~~~~~---~~---~----~---~~---------~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
....++.+.|.++|+..-. +. . + .+ ...+.+-+ ++..|++|+++++++|+++.
T Consensus 301 ----~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~~~~~~~~~l~LP~-~~~l~~~~~~~i~~~i~~~~ 375 (376)
T TIGR02379 301 ----DDRNELIKYLKEQEIMAVFHYVPLHSSPAGRYFGRFHGEDIYTTKESERLVRLPL-YYGLSKEDQARVIQTICDYL 375 (376)
T ss_pred ----CCHHHHHHHHHHCCCCccccCcCCCcchhHHhhCCCCCCChHHHHHHhceEEccC-CCCCCHHHHHHHHHHHHHHh
Confidence 1235677778777743210 10 0 0 00 23566666 88999999999999998763
No 214
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.79 E-value=1.3e-16 Score=162.52 Aligned_cols=303 Identities=13% Similarity=0.058 Sum_probs=198.0
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS 186 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (486)
.|....+..++.+.+.+|+.+..+.+. +.++|+|+++++..++.+..+ +++.|++...++.
T Consensus 116 ~Y~~~~g~~~lr~~ia~~~~~~~~~~~--------~Iiit~G~~~al~~~~~~l~~-----------pgd~Vlv~~P~y~ 176 (431)
T PRK15481 116 LYGDAPVSPELHAWAARWLRDDCPVAF--------EIDLTSGAIDAIERLLCAHLL-----------PGDSVAVEDPCFL 176 (431)
T ss_pred hcCCcCCCHHHHHHHHHHHhhccCCcC--------eEEEecCcHHHHHHHHHHhCC-----------CCCEEEEeCCCcH
Confidence 344444556788887777665443222 489999999888777765443 6788999999999
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEe-cCCccccccCChH---HHHHHHHHh
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCAT-VGTTSSTAVDPLL---ALGNIAKSN 262 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~-~~~t~tG~id~l~---~I~~ia~~~ 262 (486)
.+...++..|+ +++.||++++ .+|+++|++++++. +.+++++ .++||||.+-+.+ +|.++|+++
T Consensus 177 ~~~~~~~~~g~---~~~~v~~~~~---g~~~~~l~~~~~~~------~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~ 244 (431)
T PRK15481 177 SSINMLRYAGF---SASPVSVDAE---GMQPEKLERALAQG------ARAVILTPRAHNPTGCSLSARRAAALRNLLARY 244 (431)
T ss_pred HHHHHHHHcCC---eEEeeccCCC---CCCHHHHHHHHhcC------CCEEEECCCCCCCCCccCCHHHHHHHHHHHHhc
Confidence 99999999999 9999999743 48999999988642 3456666 8999999998765 999999999
Q ss_pred -CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCc
Q 041829 263 -GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMV 341 (486)
Q Consensus 263 -g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~ 341 (486)
++|+++|.+|+-+.. .+ ....+.....--.+..++.|.++...-+|+++.. +.... .+.....+..
T Consensus 245 ~~~~ii~De~Y~~~~~-~~-~~~~~~~~~~~vi~~~SfSK~~~~GlRiG~~i~~-~~~~~-~~~~~~~~~~--------- 311 (431)
T PRK15481 245 PQVLVIIDDHFALLSS-SP-YHSVIPQTTQRWALIRSVSKALGPDLRLAFVASD-SATSA-RLRLRLNSGT--------- 311 (431)
T ss_pred CCceEEecCchhhhcc-CC-CCCCCcCCCCCEEEEeeeccccCCCceeEEEeCC-HHHHH-HHHHHHhccc---------
Confidence 999999999976532 11 1111111111125567789999844558876653 33222 2211101000
Q ss_pred cCCCCCccCCCCCCCcHHHHHHHHHhCh----hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCC
Q 041829 342 VDYKDWQIPLGRRFRSLKLWMVLRLYGL----ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHND 417 (486)
Q Consensus 342 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~----~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~ 417 (486)
.....+..+++...+.. +.+++..+...+..+.+.+.|++. ++++..+.....+.+++..
T Consensus 312 -----------~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r~~~~~~L~~~-~~~~~~p~gg~f~~~~l~~---- 375 (431)
T PRK15481 312 -----------QWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRRQKLARALQQY-GIAIPSPGDGLNLWLPLDT---- 375 (431)
T ss_pred -----------cCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHHHHHc-CCccccCCCeEEEEEECCC----
Confidence 00122333333333321 235667777888888999999887 7765444444455555532
Q ss_pred cccchHHHHHHHHHHHccCcEEEEeeeEC---CEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 418 EDHGNKLNHKLLDDINSTGKIFISHTVLS---GKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 418 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~---~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+ ..++.+.|.+.|..+..+..+. +..++|+++++ .++++++.+++.|.+++.
T Consensus 376 ----~--~~~~~~~l~~~gV~v~pg~~f~~~~~~~~iRis~~~--~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 376 ----D--SQATALTLAKSGWLVREGEAFGVSAPSHGLRITLST--LNDAEINRLAADLHQALN 430 (431)
T ss_pred ----C--HHHHHHHHHHCCcEEecCCccccCCCCCeEEEEcCC--CChHHHHHHHHHHHHHhc
Confidence 1 1456677777786555444442 13589999943 368999999999988753
No 215
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.79 E-value=2.2e-16 Score=159.15 Aligned_cols=325 Identities=13% Similarity=0.090 Sum_probs=203.5
Q ss_pred HHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCC-CCeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQ-GGGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~-~~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
++..+.+.+...+. ....|....+..++.+.+.+|+.+.+|.+... .. ...++|+|+++++..++.+..+
T Consensus 42 ~~~~~~~a~~~~~~-~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~---~~~~~i~it~Ga~~al~~~~~~l~~----- 112 (393)
T TIGR03538 42 TPAFVLEALRENLH-GLSTYPTTKGLPELRQAIARWLERRFDLPTGV---DPERHVLPVNGTREALFAFAQAVIN----- 112 (393)
T ss_pred CCHHHHHHHHHHhh-ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccC---CCCceEEECCCcHHHHHHHHHHHcC-----
Confidence 34556666665443 23446555667889999999999988775210 01 1477899999888776665433
Q ss_pred hCccCCCCe--EEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc
Q 041829 168 VGKNSLEKL--VVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS 245 (486)
Q Consensus 168 ~~~~~~~~~--~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~ 245 (486)
+++ .|+++...+..+...++..|+ +++.+|++++++|.+|+++|++++.+. +.+|+++.++||
T Consensus 113 ------~gd~~~vlv~~P~y~~~~~~~~~~g~---~~~~v~~~~~~~~~~d~~~l~~~~~~~------~k~i~l~~p~NP 177 (393)
T TIGR03538 113 ------PGQAPLVVMPNPFYQIYEGAALLAGA---EPYFLNCTAENGFLPDFDAVPESVWRR------CQLLFVCSPGNP 177 (393)
T ss_pred ------CCCcceEEecCCCCcchHHHHHhcCC---eEEEeeccccCCCCCCHHHHHHHHhhc------ceEEEEeCCCCC
Confidence 444 488888899888889999999 999999976555889999999988653 347778899999
Q ss_pred ccccCC---hHHHHHHHHHhCCEEEeeccccchhccCc-cchhcc---cCCc--CCC--ceeeecccc-cCCCCcceEEE
Q 041829 246 STAVDP---LLALGNIAKSNGMWFHVDAAYAGSACICP-EYRQYI---DGVE--EAD--SFNMNAHKW-FLTNFDCSALW 313 (486)
Q Consensus 246 tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~-~~~~~~---~~~~--~aD--s~~~~~hK~-l~~p~~~g~l~ 313 (486)
||.+-+ +++|+++|++||+++++|.+|..+..... ...... .... ..+ .++.++.|. +....-+|+++
T Consensus 178 tG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~~~~GlRvG~~i 257 (393)
T TIGR03538 178 TGAVLSLDTLKKLIELADQYGFIIASDECYSELYFDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRSNLPGLRSGFVA 257 (393)
T ss_pred cCcccCHHHHHHHHHHHHHCCEEEEECcchhhcccCCCCCCcCHHHhcccccccccccEEEEecchhhcCCcccceEEEe
Confidence 999966 78999999999999999999976443110 010000 0010 111 456778995 44556688876
Q ss_pred EeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 314 VKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 314 ~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
.. +..+.+. .....+. +.....+..++++..+. .+.+++..++..+..+.+.+.|++
T Consensus 258 ~~-~~l~~~~-~~~~~~~--------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~ 315 (393)
T TIGR03538 258 GD-AEILKAF-LRYRTYH--------------------GCAMPIPTQLASIAAWNDEQHVRENRALYREKFAAVLEILGQ 315 (393)
T ss_pred cC-HHHHHHH-HHHHHhh--------------------ccCcCHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 3333222 1110110 00112223333333332 345666677777788888888876
Q ss_pred CCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eE--------CCEeEEEEEecCCCCCH
Q 041829 393 DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VL--------SGKYILRFAVGAPLTEW 462 (486)
Q Consensus 393 ~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~--------~~~~~lRi~~~~~~~t~ 462 (486)
. +.+..+.....+.++++ . + ..++.+.+.+ .| +.+.++ .+ .+.+++|++++ . ++
T Consensus 316 ~--~~~~~p~gg~f~~~~~~-~-------~--~~~~~~~l~~~~g-V~v~pg~~f~~~~~~~~~~~~~~Ris~~-~--~~ 379 (393)
T TIGR03538 316 V--LDLELPDAGFYLWPKVP-G-------D--DEAFARALYEEEN-VTVLPGRFLAREAEGVNPGEGRVRIALV-A--PL 379 (393)
T ss_pred h--CcccCCCeeEEEEEECC-C-------C--HHHHHHHHHHHCC-EEEeCCccccccccCCCCCCCEEEEEec-C--CH
Confidence 4 33333333334444543 1 1 1456666654 56 444433 22 12469999993 3 57
Q ss_pred HHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDK 475 (486)
Q Consensus 463 ~di~~~~~~l~~~ 475 (486)
++++..+++|.+.
T Consensus 380 ~~l~~~l~~l~~~ 392 (393)
T TIGR03538 380 EECVEAAERIRSF 392 (393)
T ss_pred HHHHHHHHHHHHh
Confidence 8899998888764
No 216
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.78 E-value=7.2e-17 Score=160.62 Aligned_cols=219 Identities=18% Similarity=0.193 Sum_probs=156.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++.|.+. .+++++|+.++..++ .... +++.|+++...|.+..
T Consensus 48 ~~p~~~~Le~~----lA~l~g~~~---------~~~~~sG~aai~~~~-~~l~-----------~Gd~Viv~~~~y~~~~ 102 (377)
T PRK07671 48 GNPTRAALEEL----IAVLEGGHA---------GFAFGSGMAAITAVM-MLFS-----------SGDHVILTDDVYGGTY 102 (377)
T ss_pred CChHHHHHHHH----HHHHhCCCc---------eEEeCCHHHHHHHHH-HHhC-----------CCCEEEECCCccchHH
Confidence 46777788888 999999764 577888876654332 2211 6777888888887443
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .+...|+ +++.++. .|++++++++++++ .+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 103 ~~~~~~~~~~G~---~v~~v~~-------~d~~~l~~ai~~~t------klV~le~P~NPtg~~~dl~~I~~la~~~g~~ 166 (377)
T PRK07671 103 RVMTKVLNRFGI---EHTFVDT-------SNLEEVEEAIRPNT------KAIYVETPTNPLLKITDIKKISTIAKEKGLL 166 (377)
T ss_pred HHHHHHHhcCCe---EEEEECC-------CCHHHHHHhcCCCC------eEEEEECCCCCCCcccCHHHHHHHHHHcCCE
Confidence 3 3344677 7777753 38899999886543 5888899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+......+ .. .++|.++.+++|++++|.+ .|+++++++....+.... ..+
T Consensus 167 lvvD~a~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~-~~~------------- 225 (377)
T PRK07671 167 TIVDNTFMTPYWQSP-IS------LGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFV-QNS------------- 225 (377)
T ss_pred EEEECCCCccccCCh-hh------hCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHH-HHh-------------
Confidence 999999976433211 11 1689999999999998864 677777765543322110 011
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.+........|..++ |...+..++++..+++..+.++|+++|++.-+
T Consensus 226 -------~g~~~~~~~a~l~~~--~l~tl~~R~~~~~~na~~la~~L~~~~~v~~v 272 (377)
T PRK07671 226 -------TGGILGPQDSWLLLR--GLKTLGIRMEEHETNSRAIAEFLNNHPAVNKV 272 (377)
T ss_pred -------hcCCCCHHHHHHHHc--CcChHHHHHHHHHHHHHHHHHHHHcCCCeeEE
Confidence 111234456676665 45667789999999999999999999988654
No 217
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.78 E-value=1.8e-16 Score=155.80 Aligned_cols=329 Identities=17% Similarity=0.092 Sum_probs=190.0
Q ss_pred HHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCC
Q 041829 54 QNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPE 133 (486)
Q Consensus 54 ~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~ 133 (486)
++.++ .+.+....+-. ..--.|+|.- ..|.......+.+..+ + +..++.+++.+.+++++|.++
T Consensus 8 ~~~~~---~~~~~~~~~~~-~~~~~ylgl~-~~~~~~~~~~~~~~~~----~-------g~~~~~~~Le~~lA~~~g~~~ 71 (346)
T TIGR03576 8 EKALE---IIREKISRGGR-DSLYDLTGLA-GGFKIDEEDLELLETY----V-------GPAIFEEKVQELGREHLGGPE 71 (346)
T ss_pred HHHHH---HHHHHHhccCC-ccccccccCC-CChhHHHHHHHHHHHh----c-------CCHHHHHHHHHHHHHHcCCCc
Confidence 44455 56665554421 1122577763 2333444444444443 1 234677777777999999965
Q ss_pred CCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEec---CCCchhHHHHHHHhCCCCCCeEEEeCCCC
Q 041829 134 DFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYAS---DQTHSALQKACQIGGIHPQNFRVLKTDSS 210 (486)
Q Consensus 134 ~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~a~~~~g~g~~~v~~v~~~~~ 210 (486)
+ ..++++||+++|..++.+..+ +++.|++. ...|.++...++..|. +++..
T Consensus 72 e-------~ilv~~gg~~a~~~~~~al~~-----------~gd~Vli~~~d~p~~~s~~~~~~l~ga---~~~~~----- 125 (346)
T TIGR03576 72 E-------KILVFNRTSSAILATILALEP-----------PGRKVVHYLPEKPAHPSIPRSCKLAGA---EYFES----- 125 (346)
T ss_pred c-------eEEEECCHHHHHHHHHHHhCC-----------CCCEEEECCCCCCCchhHHHHHHHcCC---EEecc-----
Confidence 4 589999999999888876543 56666643 5699999999999998 65321
Q ss_pred CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---CChHHHHHHHHHhCCEEEeeccccchhcc-Cccchhcc
Q 041829 211 TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---DPLLALGNIAKSNGMWFHVDAAYAGSACI-CPEYRQYI 286 (486)
Q Consensus 211 ~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~-~~~~~~~~ 286 (486)
.|+++|+. . . .+.+|+++ |++++|.+ +||++|+++|+++|+|++||.||+.+... .... ...
T Consensus 126 ----~~l~~l~~----~-~---~~~lIiit-g~s~~G~v~~~~~L~~i~~la~~~~~~livDEAy~~~~~~~~~~~-~~~ 191 (346)
T TIGR03576 126 ----DELSELKK----I-D---GTSLVVIT-GSTMDLKVVSEEDLKRVIKQAKSKEAIVLVDDASGARVRRLYGQP-PAL 191 (346)
T ss_pred ----CCHHHHhh----C-c---CceEEEEE-CCCCCCcccCHHHHHHHHHHHHHcCCEEEEECCccccccccCCCC-CHH
Confidence 14444321 1 1 13455555 57889998 89999999999999999999999865432 1111 101
Q ss_pred cCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHH
Q 041829 287 DGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRL 366 (486)
Q Consensus 287 ~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~ 366 (486)
.. ++|.++.+++|++.++. .|+++.+ +..+........+|... ..++...++..+|+.
T Consensus 192 -~~-~~divv~s~SKalaG~r-~G~v~~~-~~li~~l~~~~~~~~~s------------------~~~~~~~aa~~aL~~ 249 (346)
T TIGR03576 192 -DL-GADLVVTSTDKLMDGPR-GGLLAGR-KELVDKIKSVGEQFGLE------------------AQAPLLAAVVRALEE 249 (346)
T ss_pred -Hc-CCcEEEeccchhccccc-eEEEEeC-HHHHHHHHHhhcCcccC------------------ccHHHHHHHHHHHhh
Confidence 11 46888889999775554 5666654 34333322223333221 001112233333433
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC
Q 041829 367 YGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS 446 (486)
Q Consensus 367 ~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 446 (486)
+. .+++.+...++++.+.+.++. +.+. ++..+.+.+++.+. +. .......|.+.|.+......+.
T Consensus 250 ~~---~~~~~~~l~~r~~~~~~~l~~---~~~~-~~~~~f~~~~~~~~-------~~-~~~~~~ll~~~gV~v~~~~~f~ 314 (346)
T TIGR03576 250 FE---LSRIRDAFKRKEEVYLRLFDK---LNVE-RTPTGFVIKGVEEE-------KL-IEIGLDLLRNYGIITITAVGMP 314 (346)
T ss_pred cc---HHHHHHHHHHHHHHHHHHHHh---CCCC-cCCCeEEEEeCCCC-------CH-HHHHHHHHHhCCEEEeCCcccC
Confidence 22 244555666677777777764 3333 33445555555321 11 1223344445664444433332
Q ss_pred -CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 447 -GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 447 -~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
..+++|++++.+.-++.+.+.++++|++.
T Consensus 315 ~~~~~vRis~~~~~~~~~~~~~~~~al~~~ 344 (346)
T TIGR03576 315 GASKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred CCCCeEEEEEecChHHhcCHHHHHHHHHhc
Confidence 25699999954322233799999999764
No 218
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.78 E-value=8e-17 Score=160.89 Aligned_cols=309 Identities=12% Similarity=0.086 Sum_probs=190.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.++...++|+. +++.+|.+. .++++|||.|+..++.++.-. +++.|+++..+|.++.
T Consensus 29 ~~~~~~~~e~~----la~~~g~~~---------~v~~~sgt~al~~~l~~~~~~----------~Gd~Viv~~~t~~~~~ 85 (375)
T PRK11706 29 DGGFTRRCQQW----LEQRFGSAK---------VLLTPSCTAALEMAALLLDIQ----------PGDEVIMPSYTFVSTA 85 (375)
T ss_pred CCHHHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHhCCC----------CCCEEEECCCCcHHHH
Confidence 34544555555 888888753 789999999977766543111 6788999999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.++...|+ +++.+++++++ +.+|+++|++++++. +.+|+++ +++|...|+++|.++|+++|+++++|
T Consensus 86 ~~~~~~G~---~~v~~d~d~~~-~~~d~~~le~~i~~~------tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD 152 (375)
T PRK11706 86 NAFVLRGA---KIVFVDIRPDT-MNIDETLIEAAITPK------TRAIVPV---HYAGVACEMDTIMALAKKHNLFVVED 152 (375)
T ss_pred HHHHHcCC---EEEEEecCCCc-CCcCHHHHHHhcCCC------CeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEE
Confidence 99999999 99999998763 789999999998653 3356554 35899999999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeeecc--cccCCCCcceEEEEeCchHHHHHhcCC-----cccccccccccCCcc
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMNAH--KWFLTNFDCSALWVKDRNTLIQSLSTN-----PEFLKNKASQANMVV 342 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~h--K~l~~p~~~g~l~~r~~~~~~~~~~~~-----~~yl~~~~~~~~~~~ 342 (486)
+||+.+..... +.. + ...|.-++++| |.+.. ...|++++.+++...+..... ....... ..
T Consensus 153 ~a~a~g~~~~~--~~~--g-~~~~~~~~Sf~~~K~l~~-g~gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~------~~ 220 (375)
T PRK11706 153 AAQGVMSTYKG--RAL--G-TIGHIGCFSFHETKNYTA-GEGGALLINDPALIERAEIIREKGTNRSQFFRG------QV 220 (375)
T ss_pred CccccccccCC--eee--e-cCcCEEEEeCCCCccccc-cCCeEEEECCHHHHHHHHHHHHcCCCcchhhcc------CC
Confidence 99986543211 111 1 12466666766 98865 345666676665443221111 0000000 00
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC---eEEecCC-----CceEEEEEecCC
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR---FEVVTPR-----IFSLVCFRLLPP 414 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~---~~~~~~~-----~~~~v~f~~~~~ 414 (486)
....+ ...+..+....+-+++-....+.+++..++..++++++.+.|.++++ +.+...+ ...++.+.+.+.
T Consensus 221 ~~~~~-~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (375)
T PRK11706 221 DKYTW-VDIGSSYLPSELQAAYLWAQLEAADRINQRRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDL 299 (375)
T ss_pred Cccee-eecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCeeecCCCCCCCceeeEEEEEEECCc
Confidence 00000 01122222212222222222355788888889999999999988762 4432211 122334444321
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEE---eee-------E---C---------CEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFIS---HTV-------L---S---------GKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~---~~~-------~---~---------~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
....++.+.|.++|+..-. +.. + . ....+-+-+ ++..+++|++.+++.|
T Consensus 300 --------~~r~~l~~~L~~~gI~~~~~~~p~~~~~~~~~~~~~~~~~p~a~~~~~~~l~lP~-~~~l~~~~~~~i~~~i 370 (375)
T PRK11706 300 --------EDRSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPL-FYNLTDVEQRTVIDTI 370 (375)
T ss_pred --------CCHHHHHHHHHHCCCCccccCCccCcchhhHhcCCCCCCChHHHHHHhCcEeccC-CCCCCHHHHHHHHHHH
Confidence 1235677778877743110 100 0 0 013444544 7788999999999999
Q ss_pred HHHH
Q 041829 473 QDKA 476 (486)
Q Consensus 473 ~~~~ 476 (486)
+++.
T Consensus 371 ~~~~ 374 (375)
T PRK11706 371 LEFF 374 (375)
T ss_pred HHHh
Confidence 8763
No 219
>PRK07908 hypothetical protein; Provisional
Probab=99.78 E-value=1.5e-16 Score=157.62 Aligned_cols=306 Identities=14% Similarity=0.120 Sum_probs=192.7
Q ss_pred CHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH
Q 041829 88 SVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR 167 (486)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~ 167 (486)
.++..+.+.+...++. ...|....+..++.+. +++.+|.+++ +.++|+|+++++..++. ..
T Consensus 35 ~~~~~~~~~~~~~~~~-~~~Y~~~~g~~~lr~a----ia~~~~~~~~-------~I~it~Ga~~al~~~~~--l~----- 95 (349)
T PRK07908 35 TPPEWLRERLAARLGD-LAAYPSTEDERRARAA----VAARHGRTPD-------EVLLLAGAAEGFALLAR--LR----- 95 (349)
T ss_pred CCCHHHHHHHHHHhhH-hhcCCCccchHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHh--cC-----
Confidence 3444455555554432 1234333355555555 6777787765 68999999998766554 11
Q ss_pred hCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc
Q 041829 168 VGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST 247 (486)
Q Consensus 168 ~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG 247 (486)
++.+ ++...++......++..|+ +++.+|++.+ |.+|+++++ +. +.+++++.++|+||
T Consensus 96 ------~~~v-iv~~P~y~~~~~~~~~~G~---~i~~v~~~~~--~~~d~~~l~----~~------~~~i~l~np~NPTG 153 (349)
T PRK07908 96 ------PRRA-AVVHPSFTEPEAALRAAGI---PVHRVVLDPP--FRLDPAAVP----DD------ADLVVIGNPTNPTS 153 (349)
T ss_pred ------CCeE-EEeCCCChHHHHHHHHcCC---EEEeeccCcc--cCcChhHhc----cC------CCEEEEcCCCCCCC
Confidence 3333 3456677777888899999 9999999753 689998653 21 34788899999999
Q ss_pred ccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceee-ecccccC-CCCcceEEEEeCchHHHHHhc
Q 041829 248 AVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNM-NAHKWFL-TNFDCSALWVKDRNTLIQSLS 325 (486)
Q Consensus 248 ~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~-~~hK~l~-~p~~~g~l~~r~~~~~~~~~~ 325 (486)
.+-+.++|.++|++ +.++++|++|+-+. .. ..... .....-+.+.+ +++|.++ ....+|+++.. ++.+.....
T Consensus 154 ~~~~~~~l~~l~~~-~~~iIvDe~y~~~~-~~-~~~~l-~~~~~~~~i~i~S~SK~~~l~GlRiG~~~~~-~~~~~~~~~ 228 (349)
T PRK07908 154 VLHPAEQLLALRRP-GRILVVDEAFADAV-PG-EPESL-AGDDLPGVLVLRSLTKTWSLAGLRVGYALGA-PDVLARLTR 228 (349)
T ss_pred CCcCHHHHHHHHhc-CCEEEEECcchhhc-cC-Ccccc-ccccCCCEEEEeecccccCCccceeeeeecC-HHHHHHHHh
Confidence 99999999999975 78999999997542 11 11111 11122245555 7899886 44558988864 333332211
Q ss_pred CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHH-HHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Q 041829 326 TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMV-LRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIF 404 (486)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~-l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 404 (486)
....+ . .+. ....+... ++..+.+.+++..++..++++++.+.|+++ ++++..++..
T Consensus 229 ~~~~~-----------------~--~~~--~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~~p~~g 286 (349)
T PRK07908 229 GRAHW-----------------P--VGT--LQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGLRAV-GARVVDPAAA 286 (349)
T ss_pred cCCCC-----------------C--ccH--HHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHhC-CcEeccCCCc
Confidence 11111 0 000 01111111 111123456677788888999999999988 8887765666
Q ss_pred eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 405 SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 405 ~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+.+.+++.. ...+.+.|.+.|..+..+..+. +..++|+++ + +++++++++++|+++.
T Consensus 287 ~~~~~~~~~-----------~~~~~~~l~~~gI~v~~g~~f~~~~~~~vRis~-~---~~~~~~~l~~al~~~~ 345 (349)
T PRK07908 287 PFVLVRVPD-----------AELLRKRLRERGIAVRRGDTFPGLDPDYLRLAV-R---PRAEVPVLVQALAEIL 345 (349)
T ss_pred eEEEEECCc-----------HHHHHHHHHhCCEEEEECCCCCCCCCCeEEEEe-C---CCccHHHHHHHHHHHH
Confidence 666666542 1356666767774444333332 357999999 3 6789999999998764
No 220
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.78 E-value=7.1e-17 Score=161.55 Aligned_cols=308 Identities=15% Similarity=0.153 Sum_probs=198.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+|...+||+. ++++.|... ++.++||+.|+.+++.+... +++.|+++...+.+..
T Consensus 59 ~nPtv~~lE~~----la~leg~~~---------av~~~SG~aAi~~al~all~-----------~GD~VI~~~~~Y~~T~ 114 (432)
T PRK06702 59 GNPTLAAFEQK----LAELEGGVG---------AVATASGQAAIMLAVLNICS-----------SGDHLLCSSTVYGGTF 114 (432)
T ss_pred CCcHHHHHHHH----HHHHhCCCc---------EEEECCHHHHHHHHHHHhcC-----------CCCEEEECCCchHHHH
Confidence 47889999999 899988754 68899999999988876532 7888999999887655
Q ss_pred HH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
.. +..+|+ +++.++. .+|+++++++|++++ .+|++..++|+++.+-|+++|+++|+++|++
T Consensus 115 ~~~~~~l~~~Gi---~v~~vd~------~~d~~~l~~~I~~~T------k~I~~e~pgnP~~~v~Di~~I~~iA~~~gi~ 179 (432)
T PRK06702 115 NLFGVSLRKLGI---DVTFFNP------NLTADEIVALANDKT------KLVYAESLGNPAMNVLNFKEFSDAAKELEVP 179 (432)
T ss_pred HHHHHHHHHCCC---EEEEECC------CCCHHHHHHhCCcCC------eEEEEEcCCCccccccCHHHHHHHHHHcCCE
Confidence 54 567788 8887742 579999999998754 4777888999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHH-----HHhcCCccc-----ccc
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLI-----QSLSTNPEF-----LKN 333 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~-----~~~~~~~~y-----l~~ 333 (486)
+++|.+++...+.-| +. .+||.++-+..||+++..+ .|+++......+. ........+ ..+
T Consensus 180 livD~T~~tP~~~~p-l~------~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~~~~~~~~~~~ 252 (432)
T PRK06702 180 FIVDNTLATPYLCQA-FE------HGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQN 252 (432)
T ss_pred EEEECCCCchhhCCh-hh------cCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccccccccchhhc
Confidence 999999975433222 21 1799999999999987643 3333322110000 000000000 000
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR----------- 402 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~----------- 402 (486)
.............+....+.....+..|..++ |.+.+..++++..+++..+.+.|+++|.++.+.-|
T Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~r--gL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~~~p~~~l~ 330 (432)
T PRK06702 253 FGAAAYIVKARVQLLRDYGNCMSPFNAYISNI--GLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLA 330 (432)
T ss_pred cchhhHHHHHHHHHHHHccCCCCHHHHHHHHh--ccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCCCCccHHHH
Confidence 00000000000000112233456677777776 55778899999999999999999999988754322
Q ss_pred -------CceEEEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEee-----eE-------CC--EeEEE
Q 041829 403 -------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHT-----VL-------SG--KYILR 452 (486)
Q Consensus 403 -------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~~--~~~lR 452 (486)
..++++|.+.. + .+...++++.|.-- |. ....|. .. .| .+.+|
T Consensus 331 ~~~~~~g~gg~~sf~l~~-~------~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~liR 403 (432)
T PRK06702 331 QKYLKKGASGVLTFGIKG-G------LEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIR 403 (432)
T ss_pred HHhCcCCCceEEEEEecC-C------HHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeEE
Confidence 13588998863 1 22234555554321 10 011111 00 11 25899
Q ss_pred EEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 453 FAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 453 i~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+|+ --||+|.+++.|++...
T Consensus 404 lSv-----GlEd~eDLi~Dl~~Al~ 423 (432)
T PRK06702 404 LSV-----GIEDVSDIIADLEAALV 423 (432)
T ss_pred EEe-----ccCCHHHHHHHHHHHHh
Confidence 999 34567777777776654
No 221
>PLN02452 phosphoserine transaminase
Probab=99.78 E-value=9.9e-17 Score=157.72 Aligned_cols=340 Identities=13% Similarity=0.055 Sum_probs=215.6
Q ss_pred cccccCCCCCCH-HHHHHHHHHHhcCcCc------cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh
Q 041829 78 NYFAYYPSNSSV-AGFLGEMLSAGLNIVG------FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS 150 (486)
Q Consensus 78 ~~~~~~~~~~~~-~~~~~~~l~~~~n~~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt 150 (486)
+-+.|.|++... +.++..+....+|-.+ .....++.+.++-+++.+.|.++++.|+++. -.++++|||
T Consensus 7 ~~~~f~pGP~~lp~~Vl~~~~~~~~~~~~~g~s~~~~sHRs~~f~~i~~~~~~~L~~l~~~p~~y~-----v~~l~Gsgt 81 (365)
T PLN02452 7 RVFNFSAGPATLPANVLAKAQAELYNWEGSGMSVMEMSHRGKEFLSIIQKAEADLRELLDIPDNYE-----VLFLQGGAS 81 (365)
T ss_pred ceEeeeCCCCCCCHHHHHHHHHHHhcccccCccccccCCCchHHHHHHHHHHHHHHHHhCCCCCce-----EEEEeCccH
Confidence 445677776544 4555555555444221 1223578888999999999999999976541 356668888
Q ss_pred HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--HHHHHHHhCCCCCCeEEEeCCCCC-CCccCHHHHHHHHHHH
Q 041829 151 EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA--LQKACQIGGIHPQNFRVLKTDSST-NYSLSPDSLAEAISRD 227 (486)
Q Consensus 151 ~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s--~~~a~~~~g~g~~~v~~v~~~~~~-~~~id~~~L~~~i~~~ 227 (486)
.+.-.++...... ++.+.++. ...++ +.+.|+.+|. ..+.......+ ....++++++. +
T Consensus 82 ~~~ea~~~nl~~~----------~~~~l~~~-~G~fg~r~~~~a~~~g~---~~~~~~~~~~~~~~~~~~~~~~~----~ 143 (365)
T PLN02452 82 TQFAAIPLNLCKP----------GDKADFVV-TGSWSKKAAKEAKKYCK---TNVIASGKDEKYTKIPSVSEWEL----T 143 (365)
T ss_pred HHHHHHHHhcCCC----------CCeEEEEE-CCHHHHHHHHHHHHhCC---CcEEEecCCCCCCCCCChHHcCC----C
Confidence 7766555433221 23334443 45544 5667777776 44444222211 11456666521 1
Q ss_pred HhCCCccEEEEEecCCccccc-cCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC
Q 041829 228 LTIGLIPFFLCATVGTTSSTA-VDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN 306 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~-id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p 306 (486)
..+.+|.+++..|.+|+ +.|++++.+ +.++||++...+....+- +..+.+..++||+++ |
T Consensus 144 ----~~~~~v~~~hnETstGv~~~~~~~i~~------~~lvVDa~Ss~g~~pidv--------~~~~v~~~saqK~lG-P 204 (365)
T PLN02452 144 ----PDAKFVHICANETIHGVEFKDYPDVGN------VPLVADMSSNFLSKPVDV--------SKYGVIYAGAQKNVG-P 204 (365)
T ss_pred ----CCCcEEEECCCCCCCcEecCcccccCC------CeEEEECCccccCcccCH--------HHcCEEEEecccccC-C
Confidence 12568999999999999 699988864 799999988766654431 123344479999986 9
Q ss_pred CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChh-hHHHHHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAK 384 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~ 384 (486)
.|.|++++|++. +.+.-...+.|+.-.... ...+...+-+ +....+..+++.+-.+ |++.+.+++.++++
T Consensus 205 ~Gl~~v~vr~~~-l~~~~~~~~~~~~~~~~~-------~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a~ 276 (365)
T PLN02452 205 SGVTIVIIRKDL-IGNARPITPGMLDYKIHA-------ENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKAD 276 (365)
T ss_pred CCeEEEEEcHHH-HhhcccCCCchhhHHHHH-------hcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 999999998754 332222223332211000 0001111111 2234666777777665 89999999999999
Q ss_pred HHHHHHhcCCCeEEe-cCC---CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCC
Q 041829 385 HFEGLVAQDLRFEVV-TPR---IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLT 460 (486)
Q Consensus 385 ~l~~~l~~~~~~~~~-~~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 460 (486)
++++.|++.+||... .++ ...+|+|++.. ..+..++.+.+.++|.+.+.+...-| .+|+++ ....
T Consensus 277 ~l~~~l~~~~G~y~~~~~~~~rs~~~vsF~~~~--------~~~~~~f~~~~~~~g~~~~~G~r~~g--g~R~s~-yna~ 345 (365)
T PLN02452 277 LLYDAIDESNGFYVCPVEKSVRSLMNVPFTLGG--------SELEAEFVKEAAKAGMVQLKGHRSVG--GMRASI-YNAM 345 (365)
T ss_pred HHHHHHHhCCCcccCCCChHHhCCeEEEEEcCC--------chhHHHHHHHHHHCCCcccCCccccC--ceEEEC-cCCC
Confidence 999999998887221 111 23477888753 23567899999999976666554434 399999 7788
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~ 478 (486)
+.++++.|++.+++..++
T Consensus 346 ~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 346 PLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999887653
No 222
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=1.8e-16 Score=158.38 Aligned_cols=286 Identities=12% Similarity=0.068 Sum_probs=187.5
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCC
Q 041829 121 VLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQ 200 (486)
Q Consensus 121 ~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~ 200 (486)
+++++++++|.+.+ +.++|+|+++++..++.+... +++.|++....|..+...++..|+
T Consensus 76 lr~~ia~~~~~~~~-------~i~~t~G~~~~l~~~~~~~~~-----------~gd~vli~~P~y~~~~~~~~~~g~--- 134 (371)
T PRK05166 76 LREAIAARTGVPAD-------RIILGNGSEDLIAVICRAVLR-----------PGDRVVTLYPSFPLHEDYPTMMGA--- 134 (371)
T ss_pred HHHHHHHHhCcCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 44447888888654 589999988887655544322 677888899999989999999999
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH--hCCEEEeeccccchhcc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS--NGMWFHVDAAYAGSACI 278 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~--~g~~lhvD~A~g~~~~~ 278 (486)
+++.+|.+.+ +.+|+++|++++++.+ .+|+++.++|+||.+-|.+++.++++. .++++++|++|+.+..
T Consensus 135 ~~~~v~~~~~--~~~~~~~l~~~~~~~~------~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~- 205 (371)
T PRK05166 135 RVERVTVTPD--LGFDLDALCAAVARAP------RMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAA- 205 (371)
T ss_pred eEEEeecCCC--CCCCHHHHHHhhhcCC------CEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcC-
Confidence 9999998753 5899999999886543 467789999999999988777777664 4889999999976542
Q ss_pred CccchhcccCCc-CC--CceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC
Q 041829 279 CPEYRQYIDGVE-EA--DSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR 354 (486)
Q Consensus 279 ~~~~~~~~~~~~-~a--Ds~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 354 (486)
.......+..+. .- -.+..++.|.++.| ...|++++.++............+-
T Consensus 206 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~~l~GlRiG~~i~~~~~l~~~~~~~~~~~~----------------------- 262 (371)
T PRK05166 206 GDDYPSALTLLKARGLPWIVLRTFSKAYGLAGLRVGYGLVSDPELVGLLDRVRTPFN----------------------- 262 (371)
T ss_pred CcCcccHHHHHhhcCCCEEEEeechHhhhcchhheeeeecCCHHHHHHHHHhccCCC-----------------------
Confidence 111111111111 11 24566789998744 5588877766553332211111110
Q ss_pred CCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 355 FRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 355 ~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
...+...+++..+ ..+.+++..+...+..+++.+.|++. ++++. ++..+.+.++... + ..++.+.|.
T Consensus 263 ~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-p~~g~fl~~~~~~--------~--~~~l~~~l~ 330 (371)
T PRK05166 263 VNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEM-GYRIA-PSRANFLFFDARR--------P--ASAVAEALL 330 (371)
T ss_pred CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-cCeeC-CCcCCEEEEeCCC--------C--HHHHHHHHH
Confidence 0112222222222 23456777778888888999999988 77753 5555555444321 1 256777888
Q ss_pred ccCcEEEEeee-ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 434 STGKIFISHTV-LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 434 ~~g~~~~~~~~-~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
++| +.+.+.. .....++|++++ +.++.+++.++|+.+.
T Consensus 331 ~~g-i~v~p~~~~~~~~~iRi~~~----~~~~~~~l~~~l~~i~ 369 (371)
T PRK05166 331 RQG-VIVKPWKQPGFETFIRVSIG----SPEENDHFVAALDKVL 369 (371)
T ss_pred HCC-eEEecCCCCCCCCeEEEEcC----CHHHHHHHHHHHHHHh
Confidence 887 4444432 233579999993 5677888888887753
No 223
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=5.3e-17 Score=161.19 Aligned_cols=284 Identities=10% Similarity=0.043 Sum_probs=186.3
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCC-eEEEecCCCchhHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEK-LVVYASDQTHSALQKAC 192 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~ 192 (486)
..++.+. +++.+|.+++ +.++|+|+++++..++.+... ++ +.|+++...+..+...+
T Consensus 62 ~~~Lr~a----ia~~~~~~~~-------~I~it~Gs~~~i~~~~~~~~~-----------~g~d~vlv~~P~y~~y~~~~ 119 (354)
T PRK04635 62 PPELINA----YSAYAGVAPE-------QILTSRGADEAIELLIRAFCE-----------PGQDSIACFGPTYGMYAISA 119 (354)
T ss_pred HHHHHHH----HHHHhCcCHH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHH
Confidence 4556655 7778898775 689999999988776654332 44 77888988988888889
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh-CCEEEeecc
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN-GMWFHVDAA 271 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~-g~~lhvD~A 271 (486)
+..|+ +++.+|++. +|.+|++.+++ + + ++.+|+++.++|+||.+-|.+++.++++.. ++++++|++
T Consensus 120 ~~~g~---~v~~v~~~~--~~~~~~~~l~~-~-~------~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDea 186 (354)
T PRK04635 120 ETFNV---GVKALPLTA--DYQLPLDYIEQ-L-D------GAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEA 186 (354)
T ss_pred HHcCC---EEEEEecCC--CCCCCHHHHHh-c-c------CCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCc
Confidence 99999 999999974 36899998863 3 2 245788899999999999999999998874 799999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCC-CCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLT-NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
|.-+... ............. .+..+++|+++. ...+|+++.. ++.+........+|-
T Consensus 187 y~~~~~~-~s~~~~~~~~~~~-iv~~S~SK~~~l~GlRlG~~i~~-~~~~~~l~~~~~~~~------------------- 244 (354)
T PRK04635 187 YIEFCPE-YSVADLLASYPNL-VVLRTLSKAFALAGARCGFTLAN-EELIEILMRVIAPYP------------------- 244 (354)
T ss_pred hHhhccC-cchHHHHhhCCCE-EEEechHHHhhhhHHHHhhhhCC-HHHHHHHHhhcCCCC-------------------
Confidence 9754311 1111111111111 356678999863 3457887764 333332211111110
Q ss_pred CCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHK 427 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~ 427 (486)
.......+++..+ |.+.+++..++..+.++++.+.|++++++++. ++..+.+.+++.. . .+
T Consensus 245 ----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~g~f~~~~~~~-------~----~~ 308 (354)
T PRK04635 245 ----VPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYGGAKVL-EGNGNYVLAKFDD-------V----DA 308 (354)
T ss_pred ----CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCcEEEEECCC-------H----HH
Confidence 0111222223332 34455666777778889999999998777765 4555555555531 1 34
Q ss_pred HHHHHHccCcEEEEeee-ECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 428 LLDDINSTGKIFISHTV-LSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 428 l~~~l~~~g~~~~~~~~-~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+.+.|.+.| +.+.... ....+++|+++ + +.+|+++++++|++.
T Consensus 309 ~~~~l~~~g-v~v~~~~~~~~~~~lRis~-~---~~e~~~~l~~al~~~ 352 (354)
T PRK04635 309 VFKALWDAG-IVARAYKDPRLANCIRFSF-S---NRAETDKLIGLIRNQ 352 (354)
T ss_pred HHHHHHHCC-EEEEECCCCCCCCeEEEEe-C---CHHHHHHHHHHHHHh
Confidence 566666677 4444322 22345899998 3 789999999999764
No 224
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.78 E-value=3.4e-16 Score=156.62 Aligned_cols=286 Identities=14% Similarity=0.089 Sum_probs=189.7
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCC
Q 041829 121 VLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQ 200 (486)
Q Consensus 121 ~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~ 200 (486)
+++.+++.+|.+++ +.++|+|+++++..++.+... +++.|+++...+..+...++..|+
T Consensus 91 lr~~ia~~~~~~~~-------~I~~t~Ga~~~i~~~~~~~~~-----------~gd~Vlv~~P~y~~y~~~~~~~g~--- 149 (380)
T PLN03026 91 LRAALAEDSGLESE-------NILVGCGADELIDLLMRCVLD-----------PGDKIIDCPPTFGMYVFDAAVNGA--- 149 (380)
T ss_pred HHHHHHHHhCcChh-------hEEEcCCHHHHHHHHHHHhcC-----------CCCEEEEcCCChHHHHHHHHHcCC---
Confidence 44448888888764 588999999888776654322 677888888888888888889999
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICP 280 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~ 280 (486)
+++.+|.+. +|.+|+++|+++++.. .+.+|+++.++|+||.+-|.+++.++++.. +++++|++|..+... .
T Consensus 150 ~~~~v~~~~--~~~~d~~~l~~~~~~~-----~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~-~ 220 (380)
T PLN03026 150 EVIKVPRTP--DFSLDVPRIVEAVETH-----KPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQ-E 220 (380)
T ss_pred EEEEeecCC--CCCcCHHHHHHHHhcc-----CCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCC-c
Confidence 999999864 4789999999988421 145788889999999999999999999865 999999999754321 1
Q ss_pred cchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHH
Q 041829 281 EYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLK 359 (486)
Q Consensus 281 ~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~ 359 (486)
.....+... .-..+..++.|.++.| ...|+++.. +..+........+|- ...+.
T Consensus 221 ~~~~~~~~~-~~viv~~SfSK~~glaGlRiGy~~~~-~~~i~~l~~~~~~~~-----------------------~~~~~ 275 (380)
T PLN03026 221 SRMKWVKKY-DNLIVLRTFSKRAGLAGLRVGYGAFP-LSIIEYLWRAKQPYN-----------------------VSVAA 275 (380)
T ss_pred chHHHHHhC-CCEEEEecchHhhcCccccceeeecC-HHHHHHHHHhcCCCC-----------------------CCHHH
Confidence 111111111 1235567788998744 457777653 333332222111111 11222
Q ss_pred HHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcE
Q 041829 360 LWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKI 438 (486)
Q Consensus 360 ~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 438 (486)
..++...+. .+.+++..++..+.++++.+.|++++++.+ .++..+.+.+++.+. .+ ..++.+.|.+.|.
T Consensus 276 q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~-~p~~~~f~~~~~~~~------~~--~~~~~~~l~~~gI- 345 (380)
T PLN03026 276 EVAACAALSNPKYLEDVKNALVEERERLFGLLKEVPFLEP-YPSDANFILCRVTSG------RD--AKKLKEDLAKMGV- 345 (380)
T ss_pred HHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCCCCeE-CCCCCeEEEEECCCC------CC--HHHHHHHHHHCCe-
Confidence 333333332 344667777888888999999999865654 455666777776421 11 2467777777774
Q ss_pred EEEee-eECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 439 FISHT-VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 439 ~~~~~-~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+.+. ...+..++|+++. +.+++++++++|+++
T Consensus 346 ~v~~~~~~~~~~~lRis~~----~~~~~~~l~~al~~~ 379 (380)
T PLN03026 346 MVRHYNSKELKGYIRVSVG----KPEHTDALMEALKQL 379 (380)
T ss_pred EEEECCCCCCCCEEEEecC----CHHHHHHHHHHHHHh
Confidence 44433 2233468999993 678999999999764
No 225
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.78 E-value=8.1e-17 Score=159.83 Aligned_cols=229 Identities=19% Similarity=0.122 Sum_probs=158.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|...++|+. ++++. .. ..+++++|+.++..++.+... +++.|+++...|+...
T Consensus 49 ~~p~~~~Le~~----lA~l~--~~--------~~v~~~sG~~Ai~~~l~all~-----------~Gd~Vl~~~~~y~~~~ 103 (366)
T PRK07582 49 SNPTWRALEAA----LGELE--GA--------EALVFPSGMAAITAVLRALLR-----------PGDTVVVPADGYYQVR 103 (366)
T ss_pred CCccHHHHHHH----HHHHc--CC--------CEEEECCHHHHHHHHHHHhcC-----------CCCEEEEeCCCcHhHH
Confidence 55677888888 77777 23 368888889887776654322 6778888888887765
Q ss_pred HHH----HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KAC----QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~----~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..+ ...|+ +++.++.+... . .+.+. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 104 ~~~~~~l~~~G~---~v~~v~~~~~~--~--------~~~~~------t~lV~le~p~NPtg~v~di~~I~~~a~~~g~~ 164 (366)
T PRK07582 104 ALAREYLAPLGV---TVREAPTAGMA--E--------AALAG------ADLVLAETPSNPGLDVCDLAALAAAAHAAGAL 164 (366)
T ss_pred HHHHHHHhcCeE---EEEEECCCChH--H--------HhccC------ceEEEEECCCCCCCCccCHHHHHHHHHHcCCE
Confidence 543 34688 88888875321 1 11122 35788899999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+......+ .. -++|.++.++|||+++|.+ .|+++.+++....+ +.....+.
T Consensus 165 lvVD~t~~~~~~~~p-~~------~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~-l~~~~~~~------------ 224 (366)
T PRK07582 165 LVVDNTTATPLGQRP-LE------LGADLVVASDTKALTGHSDLLLGYVAGRDPELMAA-VERWRLLA------------ 224 (366)
T ss_pred EEEECCCCCccccCc-hh------cCCcEEEecccccccCCCCeeEEEEEcCcHHHHHH-HHHHHHHh------------
Confidence 999999864321111 11 1689999999999988876 57777666543322 21111111
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec------CC-----------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT------PR-----------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~------~~-----------~~~~ 406 (486)
+-....+..|..++. .+.+..++++..+++..+.+.|+++|.++-+. .| ..++
T Consensus 225 --------g~~~~~~~a~l~~r~--l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~ 294 (366)
T PRK07582 225 --------GAIPGPFEAWLAHRS--LGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGL 294 (366)
T ss_pred --------CCCCCHHHHHHHHhc--cccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcce
Confidence 111234566766654 45677888999999999999999999986543 12 3568
Q ss_pred EEEEec
Q 041829 407 VCFRLL 412 (486)
Q Consensus 407 v~f~~~ 412 (486)
++|.+.
T Consensus 295 ~s~~~~ 300 (366)
T PRK07582 295 VSFELA 300 (366)
T ss_pred EEEEeC
Confidence 899985
No 226
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.77 E-value=3.8e-16 Score=158.65 Aligned_cols=315 Identities=13% Similarity=0.126 Sum_probs=191.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKAC 192 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~ 192 (486)
..+.+.++.+.+++++|.+.+ ..++++|||+|+..++..++... ++. +++.+...|.+...+.
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~-------~v~~~~sgsea~~~al~~~~~~~---------~~~~ii~~~~~yhg~~~~~~ 140 (413)
T cd00610 77 YNEPAVELAELLLALTPEGLD-------KVFFVNSGTEAVEAALKLARAYT---------GRKKIISFEGAYHGRTLGAL 140 (413)
T ss_pred CCHHHHHHHHHHHHhCCCCCC-------EEEEcCcHHHHHHHHHHHHHHHc---------CCCeEEEECCCcCCccHHHH
Confidence 355666677779999985333 48999999999999999887531 333 4444555676655554
Q ss_pred HHhCCC---------CCCeEEEeCCCC----CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHH
Q 041829 193 QIGGIH---------PQNFRVLKTDSS----TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLAL 255 (486)
Q Consensus 193 ~~~g~g---------~~~v~~v~~~~~----~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I 255 (486)
...+-. ..+++.+|.+.. .++..|+++|++.+++. +..+.+|+++...+++|.+.| +++|
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~~~vi~~p~~~~~G~~~~~~~~l~~l 217 (413)
T cd00610 141 SLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEH---PEEVAAVIVEPIQGEGGVIVPPPGYLKAL 217 (413)
T ss_pred HhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcC---CCCEEEEEEccccCCCCCccCCHHHHHHH
Confidence 443220 114667776521 12456899999988652 223567777777888899877 9999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccc
Q 041829 256 GNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 256 ~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
.++|++||+++++|++|+++......+.....++ ..|.++++ |+++.++.+|+++.+ ++.. +.+.. ..+...
T Consensus 218 ~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~-~~d~~t~s--K~l~~g~~~g~~~~~-~~~~-~~~~~-~~~~~~-- 289 (413)
T cd00610 218 RELCRKHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLG--KGLGGGLPLGAVLGR-EEIM-DAFPA-GPGLHG-- 289 (413)
T ss_pred HHHHHHcCCEEEEeccccCCCcCcchhhHhhcCC-CCCeEEEc--ccccCccccEEEEEc-HHHH-Hhhcc-CCCCCC--
Confidence 9999999999999999986421111000001112 34666554 999887889998765 3333 22200 000000
Q ss_pred cccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-eEEe--cCCCceEEEEEec
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR-FEVV--TPRIFSLVCFRLL 412 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~-~~~~--~~~~~~~v~f~~~ 412 (486)
+...+.......+.++++.+.. .++.++..++.+++++.|+++.. ..++ ..+...++++.+.
T Consensus 290 ------------~t~~~~~~~~~a~~a~l~~l~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~g~~~~~~~~ 354 (413)
T cd00610 290 ------------GTFGGNPLACAAALAVLEVLEE---EGLLENAAELGEYLRERLRELAEKHPLVGDVRGRGLMIGIELV 354 (413)
T ss_pred ------------CCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCcEEEeecCceEEEEEEe
Confidence 0001111222344555655533 34567777788888888876521 1111 1344567777775
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
...............+.+.|.++| +++.+.. ..++|+++ +..+|++||++++++|+++
T Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~g-v~v~~~~---~~~lR~~~-~~~~t~~~i~~~~~~l~~~ 412 (413)
T cd00610 355 KDRATKPPDKELAAKIIKAALERG-LLLRPSG---GNVIRLLP-PLIITEEEIDEGLDALDEA 412 (413)
T ss_pred cCCCcCCcchHHHHHHHHHHHHCC-eEEeecC---CCEEEEEC-CCcCCHHHHHHHHHHHHHh
Confidence 321000000133467888888888 5555432 35799998 7788999999999999865
No 227
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.77 E-value=5e-16 Score=155.15 Aligned_cols=295 Identities=13% Similarity=0.051 Sum_probs=195.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
.++...+.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+ +++.|++...++..+..
T Consensus 64 ~~g~~~lr~aia~~~~~~~~~~~~-----~~~I~it~G~~~~l~~~~~~~~~-----------~gd~v~v~~P~y~~~~~ 127 (368)
T PRK03317 64 DRDAVALRADLAAYLTAQTGVGLT-----VENVWAANGSNEILQQLLQAFGG-----------PGRTALGFVPSYSMHPI 127 (368)
T ss_pred CCchHHHHHHHHHHhhhhccCCCC-----hhhEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHH
Confidence 346678999989999888776432 12688999988888777665443 67778889999999999
Q ss_pred HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 191 ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 191 a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
+++..|. +++.+|.+. ++.+|+++|++++++.. +.+|+++.++|+||.+-+.+++.++|+..++++++|.
T Consensus 128 ~~~~~g~---~~~~~~~~~--~~~~d~~~l~~~~~~~~-----~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE 197 (368)
T PRK03317 128 IARGTHT---EWVEGPRAA--DFTLDVDAAVAAIAEHR-----PDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDE 197 (368)
T ss_pred HHHhcCC---eeEEcccCC--CCCCCHHHHHHHHhccC-----CCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeC
Confidence 9998888 887777653 47899999999986431 3467788999999999999999999999999999999
Q ss_pred cccchhccC-ccchhcccCCcCCCc-eeeecccccCCC-CcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCCC
Q 041829 271 AYAGSACIC-PEYRQYIDGVEEADS-FNMNAHKWFLTN-FDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 271 A~g~~~~~~-~~~~~~~~~~~~aDs-~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~ 346 (486)
+|+.+.... +....... . .-+. +..++.|.++.| ..+|+++.. ++... .+.. ..+|.
T Consensus 198 ~y~~~~~~~~~~~~~~~~-~-~~~~i~~~SfSK~~g~~GlRiG~~~~~-~~~~~-~l~~~~~~~~--------------- 258 (368)
T PRK03317 198 AYAEFRRSGTPSALTLLP-E-YPRLVVSRTMSKAFAFAGGRLGYLAAA-PAVVD-ALRLVRLPYH--------------- 258 (368)
T ss_pred CchhhcccCCcCHHHHHH-h-CCCEEEEEechhhhccchhhhhhhhCC-HHHHH-HHHhcCCCCC---------------
Confidence 998653211 01111111 0 1133 444789998754 456777653 33332 2221 11110
Q ss_pred CccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
...+...++...+. .+.+.+.+++..+..+++.+.|++. ++++. ++..+++.|...+ + .
T Consensus 259 --------~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~-~~~~~~~~~~~~~--------~--~ 318 (368)
T PRK03317 259 --------LSAVTQAAARAALRHADELLASVAALRAERDRVVAWLREL-GLRVA-PSDANFVLFGRFA--------D--R 318 (368)
T ss_pred --------CCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCEeC-CCCCcEEEEeccC--------C--H
Confidence 11222223333321 2344555666777788888999887 78765 4555655542211 1 1
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
..+.+.|.++| +.+.+. ....++|+++ + +.+++++++++|+++..
T Consensus 319 ~~~~~~l~~~G-v~v~~~--~~~~~iRi~~-~---~~~~~~~~~~~l~~~~~ 363 (368)
T PRK03317 319 HAVWQGLLDRG-VLIRDV--GIPGWLRVTI-G---TPEENDAFLAALAEVLA 363 (368)
T ss_pred HHHHHHHHHCC-EEEEeC--CCCCeEEEec-C---CHHHHHHHHHHHHHHHH
Confidence 45777777787 445443 2235899998 3 67899999999988765
No 228
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.77 E-value=5.6e-16 Score=156.44 Aligned_cols=294 Identities=17% Similarity=0.145 Sum_probs=183.7
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++.+++++++|.+.. ...++++||++|+..|+..++..- +..+|......|.+...+....|..
T Consensus 88 ~~la~~l~~~~~~~~~------~~v~~~~sgsea~~~al~~~~~~g---------~~~ii~~~~~yhg~~~~~~~~~~~~ 152 (398)
T PRK03244 88 IALAERLVELLGAPEG------GRVFFCNSGAEANEAAFKLARLTG---------RTKIVAAEGGFHGRTMGALALTGQP 152 (398)
T ss_pred HHHHHHHHHhCCCCCC------CEEEEeCchHHHHHHHHHHHHHHC---------CCeEEEECCCcCCccHHHHhccCCc
Confidence 3555668998885421 148999999999999999887630 2344555455565555554444321
Q ss_pred C---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCE
Q 041829 199 P---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMW 265 (486)
Q Consensus 199 ~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~ 265 (486)
. .++..+|. .|+++|++.+.+ .+.+|++....+++|.+-| +++|.++|++||++
T Consensus 153 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~------~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~l 219 (398)
T PRK03244 153 AKRAPFEPLPGGVEHVPY-------GDVDALAAAVDD------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGAL 219 (398)
T ss_pred ccccCCCCCCCCceEeCC-------CCHHHHHHhhcC------CeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0 02233321 388999988742 2467888888999999977 89999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|++|.++......+.....++ ..|.+++ .|+++..+..|+++.+++ +.+.+... ...
T Consensus 220 lI~DEv~~g~gr~g~~~~~~~~~~-~pDi~t~--sK~l~~G~~ig~~~~~~~--~~~~~~~~---~~~------------ 279 (398)
T PRK03244 220 LVLDEVQTGIGRTGAWFAHQHDGV-TPDVVTL--AKGLGGGLPIGACLAFGP--AADLLTPG---LHG------------ 279 (398)
T ss_pred EEEeccccCCcccchHHhhhhhCC-CCCEEEE--chhhhCCcccEEEEEcHH--HHhhccCC---CCc------------
Confidence 999999976432111010011122 3677666 599987777899888754 33322210 000
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEEEEEecCCCCCcccchH
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~~~ 423 (486)
.+. .+.+.....+..+++.+..+ +..++..++.++|++.|+++ ++.++. .....++.+.+.. .
T Consensus 280 -~t~-~~~~~~~aaa~a~l~~~~~~---~~~~~~~~~~~~l~~~L~~~-~~~~~~~v~g~g~~~~i~~~~---------~ 344 (398)
T PRK03244 280 -STF-GGNPVACAAALAVLDTIASE---GLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTA---------P 344 (398)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhc-CCCceeeEeeccEEEEEEEec---------c
Confidence 011 11122223444444444333 45567778889999999885 232211 2234456666632 1
Q ss_pred HHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 424 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
...++.+++.++| +.+.+. +..++|+++ +...+++||++++++|+++.+++.
T Consensus 345 ~~~~~~~~l~~~G-v~~~~~---~~~~iR~~p-~~~~t~~~i~~~~~~l~~~l~~~~ 396 (398)
T PRK03244 345 VAKAVEAAAREAG-FLVNAV---APDVIRLAP-PLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred HHHHHHHHHHHCC-eEEeec---CCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhcc
Confidence 2356888888888 445442 235899998 777899999999999999987654
No 229
>PRK09105 putative aminotransferase; Provisional
Probab=99.77 E-value=3.9e-16 Score=155.56 Aligned_cols=278 Identities=13% Similarity=0.082 Sum_probs=185.4
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCe
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNF 202 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v 202 (486)
+.+++.+|.+++ +.++|+|+++++..++.+..+ +++.|++++..|..+...++..|+ ++
T Consensus 85 ~aia~~~~v~~e-------~I~it~Gs~~ai~~~~~~l~~-----------~gd~Vli~~P~y~~~~~~~~~~g~---~~ 143 (370)
T PRK09105 85 TLFAAQEGLPAD-------HVMAYAGSSEPLNYAVLAFTS-----------PTAGLVTADPTYEAGWRAADAQGA---PV 143 (370)
T ss_pred HHHHHHhCcChh-------hEEEcCChHHHHHHHHHHHcC-----------CCCEEEEeCCChHHHHHHHHHcCC---eE
Confidence 347888898765 689999999988777765433 667788899999999999999999 99
Q ss_pred EEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH--hCCEEEeeccccchhccCc
Q 041829 203 RVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS--NGMWFHVDAAYAGSACICP 280 (486)
Q Consensus 203 ~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~--~g~~lhvD~A~g~~~~~~~ 280 (486)
+.+|.+. +|.+|++.|++.. +. +.+|+++.++|+||.+-+.+++.++++. +++|+++|++|..+.. .+
T Consensus 144 ~~v~~~~--~~~~d~~~l~~~~-~~------~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~-~~ 213 (370)
T PRK09105 144 AKVPLRA--DGAHDVKAMLAAD-PN------AGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSD-AP 213 (370)
T ss_pred EEecCCC--CCCCCHHHHHhcC-CC------CCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhcc-Cc
Confidence 9999875 3689999998752 21 3468888999999999998888888754 4899999999954321 11
Q ss_pred cchhcccCCcCCCceee-ecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcH
Q 041829 281 EYRQYIDGVEEADSFNM-NAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSL 358 (486)
Q Consensus 281 ~~~~~~~~~~~aDs~~~-~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l 358 (486)
....... ...+.+++ ++.|.++.| ..+|+++.. +..+.. +... .+ . .....
T Consensus 214 s~~~~~~--~~~~vi~~~SfSK~~g~~GlRiG~~v~~-~~~i~~-l~~~-~~--------------------~--~~~~~ 266 (370)
T PRK09105 214 SVVDLVA--QRKDLIVLRTFSKLYGMAGMRLGLAAAR-PDLLAK-LARF-GH--------------------N--PLPVP 266 (370)
T ss_pred chHHHHh--hCCCEEEEecccHhhcCCccceeeeecC-HHHHHH-HHhc-CC--------------------C--CcCHH
Confidence 1111100 13355554 567888644 348888764 333322 2111 00 0 01122
Q ss_pred HHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCc
Q 041829 359 KLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGK 437 (486)
Q Consensus 359 ~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~ 437 (486)
...++...+. .+.+++..++..++.+++.+.|++. ++++. ++..+++.+++.. + ..++.+.|.++|.
T Consensus 267 ~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~~~f~~~~~~~--------~--~~~l~~~L~~~gI 334 (370)
T PRK09105 267 AAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKK-GYKCT-PSQANCFMVDVKR--------P--AKAVADAMAKQGV 334 (370)
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcC-CCCCcEEEEeCCC--------C--HHHHHHHHHHCCc
Confidence 3333333332 3456667778888899999999987 78765 4666666555421 1 1467777877774
Q ss_pred EEEEeeeEC-CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 438 IFISHTVLS-GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 438 ~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.+.. .+. ..+++|+++ . +++++++++++|+++.
T Consensus 335 -~v~~-~~~~~~~~~Ris~-~---~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 335 -FIGR-SWPIWPNWVRVTV-G---SEEEMAAFRSAFAKVM 368 (370)
T ss_pred -EEec-CCCCCCCeEEEEc-C---CHHHHHHHHHHHHHHh
Confidence 4532 222 246999998 3 5788999999998764
No 230
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.77 E-value=1.3e-16 Score=157.99 Aligned_cols=282 Identities=15% Similarity=0.197 Sum_probs=188.5
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc---
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH--- 185 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--- 185 (486)
..+|...+||+. ++++.|.+. .+.+++|+.|+..++.+... +++.|+++...+
T Consensus 61 ~~~P~~~~lE~~----la~leg~~~---------av~~sSG~aAi~~al~all~-----------~GD~Vl~~~~~yg~t 116 (384)
T PRK06434 61 WGNPTVQAFEEK----YAVLENAEH---------ALSFSSGMGAITSAILSLIK-----------KGKRILSISDLYGQT 116 (384)
T ss_pred CCChhHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCccchH
Confidence 367889999999 899998764 68888999888888765422 677788776532
Q ss_pred -hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 186 -SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 186 -~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
..+.+.+...|+ +++.+++++.+.+.+|+ ..+.+|++..++|+++.+.|+++|+++|++++
T Consensus 117 ~~~~~~~~~~~Gi---~v~fvd~~~~~~~~l~~--------------~~tklv~~e~~snpt~~v~Di~~I~~la~~~~- 178 (384)
T PRK06434 117 FYFFNKVLKTLGI---HVDYIDTDRLNSLDFDP--------------SNYDLIYAESITNPTLKVPDIKNVSSFCHEND- 178 (384)
T ss_pred HHHHHHHHHhcCc---EEEEECCCChhheeecC--------------CCeeEEEEEcCCCCCceeecHHHHHHHHHHcC-
Confidence 223366777899 99999987533233332 12457889999999999999999999999998
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
++||++++..... .... .++|.+++++||+++++.+ .|+++.++++...+.... ..
T Consensus 179 -lvVD~t~~s~~~~-~pl~------~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~-----~~--------- 236 (384)
T PRK06434 179 -VIVDATFASPYNQ-NPLD------LGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVER-----RK--------- 236 (384)
T ss_pred -eEEECCCCCcccC-Cchh------cCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHH-----HH---------
Confidence 5679998755322 1111 2799999999999998775 677777665433222110 00
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------CceEEEEEe
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------IFSLVCFRL 411 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------~~~~v~f~~ 411 (486)
..|.....+.+|..++ |.+.+..++++..+++..+.+.|+++|.++-+.-| ..++++|.+
T Consensus 237 -------~~G~~~~~~~A~l~~~--gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~~~~~~~~g~g~~~sf~l 307 (384)
T PRK06434 237 -------TLGSNPDPIQAYLALR--GLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFEL 307 (384)
T ss_pred -------hcCCCCCHHHHHHHHh--CCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChHHHHHhcCCCCceEEEEE
Confidence 0122234456666554 67888999999999999999999999988644322 245889988
Q ss_pred cCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEee-----eE-------CC--EeEEEEEecCCCCCHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINST------GK---IFISHT-----VL-------SG--KYILRFAVGAPLTEWRHVNAA 468 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~-----~~-------~~--~~~lRi~~~~~~~t~~di~~~ 468 (486)
.. .+...++.+.|.-- |. ....+. .+ .| .+.+|+|+ --||++.+
T Consensus 308 ~~--------~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsv-----GlEd~~dL 374 (384)
T PRK06434 308 RS--------MEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSI-----GIEDIDDL 374 (384)
T ss_pred CC--------HHHHHHHHHhCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEe-----CcCCHHHH
Confidence 52 12234566655321 11 011111 00 11 35899999 34567777
Q ss_pred HHHHHHHH
Q 041829 469 WEVMQDKA 476 (486)
Q Consensus 469 ~~~l~~~~ 476 (486)
++.|.+..
T Consensus 375 i~dl~~Al 382 (384)
T PRK06434 375 IKDIENAL 382 (384)
T ss_pred HHHHHHHh
Confidence 77777654
No 231
>PLN02672 methionine S-methyltransferase
Probab=99.77 E-value=4e-16 Score=168.79 Aligned_cols=337 Identities=12% Similarity=0.093 Sum_probs=206.8
Q ss_pred HHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh
Q 041829 89 VAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV 168 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~ 168 (486)
+|..+.+.+...+..... .+...++.+.+.+|+++.+|++.+. ....++++|+++++..++.+..+
T Consensus 711 pPp~V~eAi~eal~~~~~----s~g~pdlr~aLa~~la~~~Gv~~d~----~e~IIvt~Gs~elL~lll~aLl~------ 776 (1082)
T PLN02672 711 VPSAVKASIFESFVRQNI----SESETDPRPSILQFIKSNYGFPTDS----CTEFVYGDTSLALFNKLVLCCVQ------ 776 (1082)
T ss_pred CCHHHHHHHHHHHhhcCC----CCCChHHHHHHHHHHHHHhCcCCCC----CCEEEEeCCHHHHHHHHHHHHcC------
Confidence 344455555544432211 2223457789999999999997631 01366666655555444444333
Q ss_pred CccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCC-cccc
Q 041829 169 GKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGT-TSST 247 (486)
Q Consensus 169 ~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~-t~tG 247 (486)
+++.|+++..+++.+..+++..|. +++.||++++++|.+|++.|++++++..+ ..|+++.|+ ||||
T Consensus 777 -----pGD~VLVp~PtY~~Y~~~a~~~Ga---~vv~Vpl~~e~gf~lD~d~Le~al~~~~~-----~~I~L~nPnhNPTG 843 (1082)
T PLN02672 777 -----EGGTLCFPAGSNGTYVSAAKFLKA---NFRRIPTKSSDGFKLTAKTLASTLETVKK-----PWVYISGPTINPTG 843 (1082)
T ss_pred -----CCCEEEEeCCChHHHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHhccCCC-----CEEEEECcCCCCcC
Confidence 678899999999999999999999 99999998655699999999999854211 257778887 9999
Q ss_pred cc---CChHHHHHHHHHhCCEEEeeccccchhccCcc-----chhcccCCcC---C-Cc-eeeecccccCCC-CcceEEE
Q 041829 248 AV---DPLLALGNIAKSNGMWFHVDAAYAGSACICPE-----YRQYIDGVEE---A-DS-FNMNAHKWFLTN-FDCSALW 313 (486)
Q Consensus 248 ~i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~-----~~~~~~~~~~---a-Ds-~~~~~hK~l~~p-~~~g~l~ 313 (486)
.+ +.+++|+++|++||+++++|.+|+...+..+. .......... . .. +..++.|.++.| .-+|+++
T Consensus 844 ~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl~s~l~~~~~~sks~nVIvL~SfSKkf~lpGLRIGylI 923 (1082)
T PLN02672 844 LLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDLKSILSRLKSSNPSFAVALLGGLSTELLSGGHEFGFLA 923 (1082)
T ss_pred ccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccchhhHHHHhccccCCceEEEEeCcHHhhccHHHHheeEE
Confidence 99 45788888999999999999999865442211 1111111111 1 12 233667555444 5688888
Q ss_pred EeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC------hhhHHHHHHHHHHHHHHHH
Q 041829 314 VKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG------LENLQGYIRNHIQLAKHFE 387 (486)
Q Consensus 314 ~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g------~~g~~~~~~~~~~~a~~l~ 387 (486)
..++.... .+.....+... . ....+.+.+++..+. .+.+++..+...++.+++.
T Consensus 924 ap~~eLi~-~l~~~~~~s~~-----------------~--~~~q~Aaaaalall~~~~~~~~~~l~e~r~~Lk~rRd~L~ 983 (1082)
T PLN02672 924 LNDSVLID-AFHSAPGLSRP-----------------H--STLKYTIKKLLGLKNQKSSDLLDGVAEQKKILKSRAERLK 983 (1082)
T ss_pred eCCHHHHH-HHHHhhhhcCC-----------------C--cHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHH
Confidence 76553332 22211111000 0 001122222222221 2345666677888899999
Q ss_pred HHHhcCCCeEEecCCCceEEEEEecCCC------CCcc----cchHHHHHHHHHHHccCcEEEEeeeE-CCEeEEEEEec
Q 041829 388 GLVAQDLRFEVVTPRIFSLVCFRLLPPH------NDED----HGNKLNHKLLDDINSTGKIFISHTVL-SGKYILRFAVG 456 (486)
Q Consensus 388 ~~l~~~~~~~~~~~~~~~~v~f~~~~~~------~~~~----~~~~~~~~l~~~l~~~g~~~~~~~~~-~~~~~lRi~~~ 456 (486)
+.|++. ++++. +|..+++.|.-.+.. .+.. +......++.+.|.++.++.+.++.+ ...+++|++++
T Consensus 984 e~L~~~-Gi~v~-~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~lds~efae~LLee~GVaV~PGs~FG~~g~~RIsfa 1061 (1082)
T PLN02672 984 ETLEAC-GWDVL-EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIKLDSSNIREAILKSTGLCINSSSWTGIPGYCRFSFA 1061 (1082)
T ss_pred HHHHHC-CCeEe-cCCcEEEEEEEccccccccccccccccccccCCCHHHHHHHHHHcCCEEEecCcccCCCCeEEEEec
Confidence 999987 78765 566666655421100 0000 00011356888888774466666544 33579999993
Q ss_pred CCCCCHHHHHHHHHHHHHHHH
Q 041829 457 APLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 457 ~~~~t~~di~~~~~~l~~~~~ 477 (486)
+++++++++++.|+++.+
T Consensus 1062 ---~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1062 ---LEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred ---CCHHHHHHHHHHHHHHHH
Confidence 478899999999988654
No 232
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.77 E-value=2.2e-17 Score=156.66 Aligned_cols=290 Identities=11% Similarity=0.051 Sum_probs=199.9
Q ss_pred cccCCCCCCHHHHHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHH
Q 041829 80 FAYYPSNSSVAGFLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLL 158 (486)
Q Consensus 80 ~~~~~~~~~~~~~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~ 158 (486)
+|.-...-++|..+.+.+....... ...|..+-+..++.+.+++.+++++|-... ...+.++|.|+.+++..+++
T Consensus 36 LgqGfp~~~~P~fv~ea~~~~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~----~~~eVlVT~GA~~ai~~~~~ 111 (420)
T KOG0257|consen 36 LGQGFPDFPPPKFVTEAAKNAAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLD----PDDEVLVTAGANEAISSALL 111 (420)
T ss_pred ccCCCCCCCCcHHHHHHHHHHhccchhccccccCCchHHHHHHHHHHHHHhccccC----CcccEEEecCchHHHHHHHH
Confidence 5544344556777777776655543 567777888899999999999998875321 01369999999999999998
Q ss_pred HHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCC------CCCCCccCHHHHHHHHHHHHhCCC
Q 041829 159 AARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTD------SSTNYSLSPDSLAEAISRDLTIGL 232 (486)
Q Consensus 159 ~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~------~~~~~~id~~~L~~~i~~~~~~g~ 232 (486)
+..+ +++.|++-++.+.+.....++.|. ..+.||.. ...+|.+|++.|+.++.+.++
T Consensus 112 ~l~~-----------~GDeVii~eP~fd~Y~~~~~maG~---tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk--- 174 (420)
T KOG0257|consen 112 GLLN-----------PGDEVIVFEPFFDCYIPQVVMAGG---TPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTK--- 174 (420)
T ss_pred HHcC-----------CCCEEEEecCcchhhhhHHhhcCC---cceeeccccccccccCccccCChHHHHhhccCCcc---
Confidence 8776 788999999999999999999999 88999987 344699999999999988754
Q ss_pred ccEEEEEecCCccccccC---ChHHHHHHHHHhCCEEEeeccccchhccCccchhc--ccCCcCCCceeeecccccCCC-
Q 041829 233 IPFFLCATVGTTSSTAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY--IDGVEEADSFNMNAHKWFLTN- 306 (486)
Q Consensus 233 ~p~~vv~~~~~t~tG~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~--~~~~~~aDs~~~~~hK~l~~p- 306 (486)
+|+++.|+|+||.+- .|++|++||++||+|++.|.+|........++... +.|+...-.=+.++.|.++..
T Consensus 175 ---~Ii~ntPhNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TG 251 (420)
T KOG0257|consen 175 ---AIILNTPHNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTG 251 (420)
T ss_pred ---EEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEeccccceeeeee
Confidence 899999999999995 48999999999999999999998765543222111 133322333355678887643
Q ss_pred CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC---CcHHHHHHH--HHhC-hhhHHHHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF---RSLKLWMVL--RLYG-LENLQGYIRNHI 380 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~---~~l~~~~~l--~~~g-~~g~~~~~~~~~ 380 (486)
.-.|+++. ++..+.......... ...+...+ .+.+....+ +.-+ .....++.+...
T Consensus 252 WrlGW~ig-p~~L~~~~~~vh~~~-----------------~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~ 313 (420)
T KOG0257|consen 252 WRLGWAIG-PKHLYSALFPVHQNF-----------------VFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYK 313 (420)
T ss_pred eeeeeeec-hHHhhhhHHHHhhcc-----------------ccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHH
Confidence 34777776 444333222111111 11122121 111111112 1112 233445888999
Q ss_pred HHHHHHHHHHhcCCCeEEecCCCceEEEEEec
Q 041829 381 QLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLL 412 (486)
Q Consensus 381 ~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~ 412 (486)
++++.|.+.|.++ |+.+..+.....+...+.
T Consensus 314 ~krdil~k~L~~l-g~~v~~p~gayyl~adfs 344 (420)
T KOG0257|consen 314 EKRDILAKALEEL-GLKVTGPEGAYYLWADFS 344 (420)
T ss_pred HHHHHHHHHHHhc-CCccccCCCceEEEEecc
Confidence 9999999999999 999876655555555554
No 233
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.77 E-value=7e-16 Score=152.01 Aligned_cols=348 Identities=14% Similarity=0.117 Sum_probs=209.6
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVL 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 157 (486)
-|......+.+ .++....+... -..-..|..+|...+||++ +++++|++. .++|++||.|...+.
T Consensus 39 v~iDLltDsgT-~aMs~~q~a~~-~~GDe~yag~~s~~~lE~~----va~~~G~~~---------av~v~sGT~Al~ll~ 103 (450)
T TIGR02618 39 VYIDLLTDSGT-NAMSDKQWAGL-MMGDEAYAGSRNFYHLERT----VRELYGFKY---------VVPTHQGRGAENLLS 103 (450)
T ss_pred eEEEcccCCCc-HHHHHHHHHHh-hhcchhhcCCCcHHHHHHH----HHHHHCCCe---------EEEcCCHHHHHHHHH
Confidence 35555544333 33333313322 2222468899999999999 889999876 799999999955432
Q ss_pred HHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH-HHHhCCCCCCeEEEeCCC--------CCCCccCHHHHHHHHHHHH
Q 041829 158 LAARDKALKRVGKNSLEKLVVYASDQTHSALQKA-CQIGGIHPQNFRVLKTDS--------STNYSLSPDSLAEAISRDL 228 (486)
Q Consensus 158 ~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a-~~~~g~g~~~v~~v~~~~--------~~~~~id~~~L~~~i~~~~ 228 (486)
.+.-+ ++++| +...|.+...+ ....|. .++-++.++ ..+|.||+++|+++|++..
T Consensus 104 -~l~l~----------pGDeV--psn~~f~Tt~ahIe~~Ga---v~vDi~~dea~~~~~~~p~~GniD~~~Le~aI~~~~ 167 (450)
T TIGR02618 104 -QIAIK----------PGDYV--PGNMYFTTTRYHQEKNGA---TFVDIIIDEAHDAQLNIPFKGNVDLKKLQKLIDEVG 167 (450)
T ss_pred -HhCCC----------CcCEE--CCceeHHHHHHHHHhCCe---EEEeeecccccccccCCCCCCCcCHHHHHHHhcccc
Confidence 11111 56655 56788766665 677777 666664431 1247999999999998532
Q ss_pred hCCCccEEEEEecCCccc-ccc---CChHHHHHHHHHhCCEEEeeccccch-hccCc----cch-----hcccC-CcCCC
Q 041829 229 TIGLIPFFLCATVGTTSS-TAV---DPLLALGNIAKSNGMWFHVDAAYAGS-ACICP----EYR-----QYIDG-VEEAD 293 (486)
Q Consensus 229 ~~g~~p~~vv~~~~~t~t-G~i---d~l~~I~~ia~~~g~~lhvD~A~g~~-~~~~~----~~~-----~~~~~-~~~aD 293 (486)
. ...| +|+++...+.. |.. +++++|.++|++||+.+|.|+|+... ..+.. .+. ...+. .+.+|
T Consensus 168 ~-~~~~-lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~re~g~~~~~i~ei~~e~~~~aD 245 (450)
T TIGR02618 168 A-DKIP-YICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKEREQGYEDKSIAEILKEMMSYAD 245 (450)
T ss_pred C-cccC-ceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhcccccccCCCHHHHHHHHhccCc
Confidence 1 1223 45555555544 666 67899999999999999999998762 22211 111 11111 34799
Q ss_pred ceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHH
Q 041829 294 SFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQ 373 (486)
Q Consensus 294 s~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~ 373 (486)
++++++||-.++|. .|++.+++++.+.+.-.....| .. +..++.-.+|.. -++..++...-. +
T Consensus 246 ~~~~S~~Kd~~~~~-GG~l~~~d~~l~~k~r~~~~~~-eG----------~~tyGgla~r~~--~ala~gL~e~~~---~ 308 (450)
T TIGR02618 246 GCTMSGKKDCLVNI-GGFLCMNDDEMFQSAKELVVVF-EG----------MPSYGGLAGRDM--EAMAIGIREAVD---Y 308 (450)
T ss_pred EEEEeeccCCCCCC-ceEEEeCCHHHHHHHHHHhhhc-CC----------ccccCchhhhhH--HHHHHHHHHhhh---H
Confidence 99999999999997 5777779987666543333222 00 000010011111 122223332211 1
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCC--CCCcccchHHHHHHHHHHHcc-CcEEEEeeeE-----
Q 041829 374 GYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPP--HNDEDHGNKLNHKLLDDINST-GKIFISHTVL----- 445 (486)
Q Consensus 374 ~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~--~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~----- 445 (486)
...++....+++|.+.|.+. |+.++.++..+.|.+....- ..... ..-.+.|...|... |+-.+.-+.+
T Consensus 309 ~y~~~r~~~a~~La~~L~~~-Gvpv~~p~ggh~V~vda~~~lph~~~~--~~p~~al~~~ly~~~gir~~e~g~~~~~~~ 385 (450)
T TIGR02618 309 EYIEHRVKQVRYLGDKLKAA-GVPIVEPVGGHAVFLDARRFLPHIPQD--QFPAQSLAASIYVETGVRSMERGIVSAGRN 385 (450)
T ss_pred HHHHHHHHHHHHHHHHHHHC-CCcccCCCCcceEEEEhHHhCCCCChh--hChHHHHHHHHHHHhCccEEeecceecccC
Confidence 45556666799999999998 99998777778777754321 10011 11224455555443 3212211111
Q ss_pred --------CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 446 --------SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 446 --------~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
..-..+|+++.-..-|.+++|.+.++|..+.++
T Consensus 386 ~~~~~~~~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 386 NVTGEHHRPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred CCCCcccCCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 012589999855566899999999999988764
No 234
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.77 E-value=1.8e-16 Score=155.11 Aligned_cols=336 Identities=14% Similarity=0.096 Sum_probs=195.0
Q ss_pred ccccCCCCCCHHHHHHHHHHHhcCc-Cc------cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 79 YFAYYPSNSSVAGFLGEMLSAGLNI-VG------FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~~n~-~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
-+..+++-......+.+.+.+.+.+ +. -.|.......++|.-+.+.++++||+++..++ ..+=..||+.
T Consensus 22 ~l~LiaSEN~~Sp~v~~al~S~l~nkyaeg~pg~ryy~G~~~id~iE~la~~ra~~lF~~~~~~w~----anvqp~SGs~ 97 (399)
T PF00464_consen 22 TLNLIASENYMSPAVREALGSDLTNKYAEGYPGKRYYGGCEYIDEIEELAIERAKELFGAEPKEWY----ANVQPHSGSQ 97 (399)
T ss_dssp SEE-CTT-----HHHHHHHTSGGGGS-TTEETTEESSSSTHHHHHHHHHHHHHHHHHHT-STTTEE----EE---SSHHH
T ss_pred CccccCcccccCHHHHHHhCCcceeeccccCCCcccccCcchhhHHHHHHHHHHHHHhCCCcccce----EEeecCCchH
Confidence 3444555444444555555444432 21 13445567889999999999999999854221 2455568899
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCeEEEec---CCCchhHHHHHHH-------hCCCCCCeEEEeCCCCCCCccCHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKLVVYAS---DQTHSALQKACQI-------GGIHPQNFRVLKTDSSTNYSLSPDSLA 221 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~~v~~s---~~~H~s~~~a~~~-------~g~g~~~v~~v~~~~~~~~~id~~~L~ 221 (486)
||+.++.+..+ +++.|+.- ...|.|.-..... ... +++.+++|++ ++.+|.++++
T Consensus 98 An~av~~aLl~-----------pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~---~~~~y~~d~~-~~~ID~d~l~ 162 (399)
T PF00464_consen 98 ANLAVYMALLK-----------PGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYF---ESVPYPVDPD-TGLIDYDELE 162 (399)
T ss_dssp HHHHHHHHHT------------TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHS---EEEEEEB-TT-TSSB-HHHHH
T ss_pred HHHHHHHHHHh-----------hcCcEEecChhhcccccccccccccccccccceE---EEEeeeeecC-CCeECHHHHH
Confidence 99888876655 66766643 3346654433222 234 6778888865 4799999999
Q ss_pred HHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeeccc
Q 041829 222 EAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHK 301 (486)
Q Consensus 222 ~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK 301 (486)
+.+++.+ |.+|++-. +..-..-|++++.+||++.|+++++|+||-.+.+....+..- ++.||+++.+.||
T Consensus 163 ~~a~~~k-----PklIi~G~--S~y~~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P---~~~ADvvt~sThK 232 (399)
T PF00464_consen 163 KLAKEHK-----PKLIICGA--SSYPRPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNP---FPYADVVTGSTHK 232 (399)
T ss_dssp HHHHHH-------SEEEEE---SSTSS---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--G---CCTSSEEEEESSG
T ss_pred HHHhhcC-----CCEEEECc--hhccCccCHHHHHHHHHhcCcEEEecccccccceehheecCc---cccceEEEeeccc
Confidence 9998764 66776654 334455789999999999999999999998877765544433 3479999999999
Q ss_pred ccCCCCcceEEEEe-------------CchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC-CcHHHHHHHHHh
Q 041829 302 WFLTNFDCSALWVK-------------DRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF-RSLKLWMVLRLY 367 (486)
Q Consensus 302 ~l~~p~~~g~l~~r-------------~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~-~~l~~~~~l~~~ 367 (486)
.|.+|. +|+++++ +.+ +.+.+.. .+++ +.+.+-.. ...++..+++..
T Consensus 233 tl~GPr-ggiI~~~~~~~~~~~~~~~~~~~-l~~~I~~---avfP--------------~~qg~~h~~~iaalAval~ea 293 (399)
T PF00464_consen 233 TLRGPR-GGIILTNKGSKNVDKKGKEIDEE-LAEKIDS---AVFP--------------GLQGGPHMHRIAALAVALKEA 293 (399)
T ss_dssp GG-SSS--EEEEES-SEEEE-TTS-EEEHH-HHHHHHH---HHTT--------------TT-SS--HHHHHHHHHHHHHH
T ss_pred cccccC-ceEEEEcCCccccCCcccccHHH-HHHHhcc---ccCC--------------CcccCcchhHHHHHHHHHhcc
Confidence 999996 5888888 222 2222111 0110 11222222 223555667766
Q ss_pred ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC
Q 041829 368 GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS 446 (486)
Q Consensus 368 g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 446 (486)
....+++..++..++|+.|.+.|.+. |++++. -++.++|.+.+.+.+. + -....+.|.+.| +.+....+.
T Consensus 294 ~~~~fk~Ya~qVv~NAk~La~~L~~~-G~~v~~ggTd~H~vlvd~~~~~~-----~--g~~a~~~Le~~g-I~vnkn~iP 364 (399)
T PF00464_consen 294 LSPEFKEYAKQVVKNAKALAEALQER-GFKVVTGGTDNHQVLVDLRSFGI-----D--GKEAEKALEEAG-IIVNKNTIP 364 (399)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHT-T-EEGGGS-SSSEEEEEGGGGTS--------HHHHHHHHHHTT-EE-EEE--T
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhhC-CcEEEECCCCCCeEEEEeccccc-----c--hHHHHHHHHhcC-eeecccccC
Confidence 66677899999999999999999997 999985 4667788888764321 1 133444455556 444433221
Q ss_pred ------CEeEEEEEe---cCCCCCHHHHHHHHHH
Q 041829 447 ------GKYILRFAV---GAPLTEWRHVNAAWEV 471 (486)
Q Consensus 447 ------~~~~lRi~~---~~~~~t~~di~~~~~~ 471 (486)
....+|+.. +.....++|++++.+.
T Consensus 365 ~d~~~~~~sGlRlGT~~lT~rG~~e~dm~~iA~~ 398 (399)
T PF00464_consen 365 GDRSPFVPSGLRLGTPALTRRGMKEEDMKEIAEL 398 (399)
T ss_dssp TTSTTTT-SEEEEESHHHHHTT--HHHHHHHHHH
T ss_pred CCCCCCCCCEEEECCHHHHhCCCCHHHHHHHHhh
Confidence 135899987 2223456777666554
No 235
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=99.76 E-value=2e-16 Score=159.76 Aligned_cols=240 Identities=17% Similarity=0.195 Sum_probs=158.7
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-- 187 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (486)
..|...++|++ +++++|.+. .+++++|+.|+..++.+... +++.|+++...|..
T Consensus 55 ~~p~~~~le~~----lA~l~g~~~---------~v~~~sG~~Ai~~al~~l~~-----------~Gd~Vl~~~~~y~~t~ 110 (418)
T TIGR01326 55 MNPTTDVLEQR----IAALEGGVA---------ALAVASGQAAITYAILNLAQ-----------AGDNIVSSSYLYGGTY 110 (418)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEECCCcHHHH
Confidence 45666777777 899999643 79999999998888876543 56778888777644
Q ss_pred --HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 188 --LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 188 --~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+...+...|+ +++.++.+ |+++|++++++. +.+|+++.++|++|.+.|+++|+++|+++|++
T Consensus 111 ~~~~~~~~~~G~---~v~~v~~~-------d~~~l~~~l~~~------t~~V~le~p~NPtg~v~dl~~I~~la~~~~i~ 174 (418)
T TIGR01326 111 NLFKHTLKRLGI---EVRFVDPD-------DPEEFEKAIDEN------TKAVFAETIGNPAINVPDIEAIAEVAHAHGVP 174 (418)
T ss_pred HHHHHHHHHcCc---EEEEECCC-------CHHHHHHhcCcC------CeEEEEECCCCCCCeecCHHHHHHHHHHcCCE
Confidence 3445677888 88888742 889999988653 34788889999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcccccccc-cccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFLKNKA-SQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~-~~~~~~~~ 343 (486)
++||++|+.+....+ .. .++|.++.+++|+++++. ..|.+++....... .... -..+.... ........
T Consensus 175 livD~t~~~~~~~~~-l~------~g~Divv~S~sK~l~g~G~~lGg~v~~~~~~~~-~~~~-~~~~~~~~~~q~a~~~~ 245 (418)
T TIGR01326 175 LIVDNTFATPYLCRP-ID------HGADIVVHSATKYIGGHGTAIGGVIVDGGKFDW-ANGR-FPLFTTPDPSYHGLVFT 245 (418)
T ss_pred EEEECCCchhhcCCc-hh------cCCeEEEECccccccCCccceEEEEEecccccc-cccc-cccccCCCCccccchhh
Confidence 999999976532211 11 268999999999998753 26666665432110 0000 00000000 00000000
Q ss_pred C------------CCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 344 Y------------KDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 344 ~------------~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
. ..+....|-......+|..++ |...+..++++..+.+..+.+.|.++|++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~--~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~ 312 (418)
T TIGR01326 246 ETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQ--GLETLSLRMERHVENALKVAEFLEAHPKVAWVN 312 (418)
T ss_pred hhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHC--CcccHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 0 000001122233455665554 566777888888889999999999999987543
No 236
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.76 E-value=1.1e-15 Score=154.41 Aligned_cols=301 Identities=16% Similarity=0.146 Sum_probs=180.8
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHH
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQK 190 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~ 190 (486)
.+...++|++ +++++|.+. .++++|||+|+..|+.++|.......+....+..+|..+...|-+...
T Consensus 82 ~~~~~~l~~~----l~~~~~~~~---------~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~ 148 (401)
T PRK00854 82 NDQLAPLYEE----LAALTGSHK---------VLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLS 148 (401)
T ss_pred CHHHHHHHHH----HHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHH
Confidence 3455566666 788887642 799999999999999999864211100000012445555556766544
Q ss_pred HHHHhCCC---------CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHH
Q 041829 191 ACQIGGIH---------PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGN 257 (486)
Q Consensus 191 a~~~~g~g---------~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ 257 (486)
+....+-. ..++..+| ..|+++|++++.+. +.+|++..+.+++|.+.| +++|.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~~d~~~le~~i~~~------~~aii~e~~~~~~G~~~~~~~~l~~l~~ 215 (401)
T PRK00854 149 IVGFSTDPDARGGFGPFTPGFRVVP-------FGDAEALEAAITPN------TVAFLVEPIQGEAGVIIPPAGYFTRVRE 215 (401)
T ss_pred HHhccCCccccccCCCCCCCeEEeC-------CCCHHHHHHHhCCC------eEEEEEccccCCCCCcCCCHHHHHHHHH
Confidence 33221100 01233332 24899999988643 458999999999999976 999999
Q ss_pred HHHHhCCEEEeeccccchhccCcc-chhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcccccccc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPE-YRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~-~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
+|++||+++++|++|.++.. .+. +.....++ ..|.++++ |++...+ .+|+++.+++ .+ ..+.. ....
T Consensus 216 l~~~~gi~lI~DEv~~g~g~-~g~~~~~~~~g~-~~D~~~~~--K~l~gg~~~ig~v~~~~~-~~-~~l~~----~~~~- 284 (401)
T PRK00854 216 LCTANNVTLILDEIQTGLGR-TGKLLAEEHEGI-EADVTLIG--KALSGGFYPVSAVLSNSE-VL-GVLKP----GQHG- 284 (401)
T ss_pred HHHHcCCEEEEechhhCCCC-CchHhHHhhcCC-CCCEEEec--ccccCCccCeEEEEEcHH-HH-hcccC----CCCC-
Confidence 99999999999999975322 221 11111222 36877764 9987653 5677776543 22 22211 0000
Q ss_pred cccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe--cCCCceEEEEEecC
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV--TPRIFSLVCFRLLP 413 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~--~~~~~~~v~f~~~~ 413 (486)
. +. ++.+.....+.++|+.+.. ..+.++..++++++.+.|+++. +..+ ..+...++.+.+.+
T Consensus 285 ---------~--t~-~~~~~~~aa~~a~L~~l~~---~~~~~~~~~~~~~l~~~L~~~~-~~~~~~~~g~g~~~~i~~~~ 348 (401)
T PRK00854 285 ---------S--TF-GGNPLACAVARAALKVLTE---EGMIENAAEMGAYFLEGLRSIR-SNIVREVRGRGLMLAVELEP 348 (401)
T ss_pred ---------C--CC-CcCHHHHHHHHHHHHHHHH---cCHHHHHHHHHHHHHHHHHhhc-cCceEEEeccceEEEEEEec
Confidence 0 01 1111222233344443322 2356778888999999998863 2222 12344556665543
Q ss_pred CCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 414 PHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 414 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
. .....++.+.|.++| +.+.+ .+..++|+++ +..++++||++++++|+++.
T Consensus 349 ~-------~~~~~~~~~~L~~~G-V~v~~---~~~~~lR~~p-~~~~t~e~i~~~i~~l~~~l 399 (401)
T PRK00854 349 E-------AGGARQYCEALKERG-LLAKD---THDHTIRLAP-PLVITREQVDWALEQIAKVL 399 (401)
T ss_pred C-------chhHHHHHHHHHHCC-eEEec---CCCCEEEEeC-CcccCHHHHHHHHHHHHHHh
Confidence 2 112356788888887 44432 2335899998 77889999999999998765
No 237
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.76 E-value=4.3e-16 Score=157.67 Aligned_cols=325 Identities=13% Similarity=0.025 Sum_probs=198.2
Q ss_pred HHHHHHHHHHhcCc-----CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHH
Q 041829 90 AGFLGEMLSAGLNI-----VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKA 164 (486)
Q Consensus 90 ~~~~~~~l~~~~n~-----~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~ 164 (486)
+..+.+.+...+.. ....|...++..++.+.+.+|+.+..|++.+ ..+.++|+|+++++.. +..+.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~-l~~~~~-- 120 (409)
T PRK07590 49 PPAVIEAMHKAVDEMGTAETFRGYGPEQGYDFLREKIAENDYQARGCDIS-----ADEIFISDGAKCDTGN-ILDIFG-- 120 (409)
T ss_pred CHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHHhcCCcCC-----hhhEEECCCHHHHHHH-HHHhcC--
Confidence 34455555554432 2345656678889999999998877776432 1258888888877654 322221
Q ss_pred HHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCC-----------eEEEeCCCCCCCccCHHHHHHHHHHHHhCCCc
Q 041829 165 LKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQN-----------FRVLKTDSSTNYSLSPDSLAEAISRDLTIGLI 233 (486)
Q Consensus 165 ~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~-----------v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~ 233 (486)
+++.|++...++..+...++..|. + ++.+|++.++++..|.+. ..
T Consensus 121 ---------~gd~V~v~~P~Y~~~~~~~~~~g~---~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~------------~~ 176 (409)
T PRK07590 121 ---------PDNTIAVTDPVYPVYVDTNVMAGR---TGEANEDGRYSGIVYLPCTAENNFVPELPE------------EK 176 (409)
T ss_pred ---------CCCEEEEeCCCCcchHHHHHHcCC---cccccccccccceeEeecccccCCcccCcc------------cC
Confidence 677899999999999999999998 6 888998755445555431 12
Q ss_pred cEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC-C--ceeeecccccCCC-
Q 041829 234 PFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA-D--SFNMNAHKWFLTN- 306 (486)
Q Consensus 234 p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a-D--s~~~~~hK~l~~p- 306 (486)
+.+|+++.++||||.+-+ +++|+++|++||+++++|.+|+.+....... ..+..+... + .+..++.|.++.|
T Consensus 177 ~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~~~~~~-~~~~~~~~~~~~vi~~~SfSK~~~~pG 255 (409)
T PRK07590 177 VDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFISDPSLP-HSIYEIEGARECAIEFRSFSKTAGFTG 255 (409)
T ss_pred ceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhccCCCCC-cchhhCCCcccceEEEecCccccCCcC
Confidence 567888899999999955 6778888999999999999998654311111 111122221 2 3355789999644
Q ss_pred CcceEEEEeCchHHHHHhcCC------cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHH
Q 041829 307 FDCSALWVKDRNTLIQSLSTN------PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIR 377 (486)
Q Consensus 307 ~~~g~l~~r~~~~~~~~~~~~------~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~ 377 (486)
.-+|+++..+ ..+.. +... ..+..... ... . ....+...++...+ +...++++.+
T Consensus 256 lRiG~~i~~~-~li~~-~~~~~~~~~~~~~~~~~~-----------~~~-~--~~s~~~q~a~~~~l~~~~~~~~~~~~~ 319 (409)
T PRK07590 256 TRCAYTVVPK-ELKGK-TSDGEGVSLNSLWNRRQS-----------TKF-N--GVSYIVQRAAEAVYSPEGKAQIKELID 319 (409)
T ss_pred ceeEEEEcCH-HHhhh-ccccchhhhHHHHHHHHh-----------hcc-c--CcCHHHHHHHHHHhcCCcHHHHHHHHH
Confidence 5588877643 32221 0000 00000000 000 0 01122333332222 3456667777
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEee-eE--CCEeEEEEE
Q 041829 378 NHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT-VL--SGKYILRFA 454 (486)
Q Consensus 378 ~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~-~~--~~~~~lRi~ 454 (486)
+..+..+.+.+.|+++ ++++..+.....+.+++.+. .+ ..++...+.++.++.+.+. .+ .+..++|++
T Consensus 320 ~~~~~r~~l~~~L~~~-~~~~~~~~g~~f~wi~~~~~------~~--~~~~~~~l~~~~gv~v~pg~~f~~~~~~~iRi~ 390 (409)
T PRK07590 320 YYMENAKIIREGLESA-GFEVYGGVNAPYIWVKTPDG------MS--SWDFFDKLLQEANVVGTPGSGFGPSGEGYFRLS 390 (409)
T ss_pred HHHHHHHHHHHHHHhc-CCceecCCcceEEEEECCCC------CC--HHHHHHHHHHHCCEEEeChhHhCCCCCCEEEEE
Confidence 8888889999999987 77765443444556666431 11 1456666665433544443 33 234699999
Q ss_pred ecCCCCCHHHHHHHHHHHHHH
Q 041829 455 VGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 455 ~~~~~~t~~di~~~~~~l~~~ 475 (486)
+ ..++++++..++.|.++
T Consensus 391 ~---~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 391 A---FGSRENVLEAMERIKKA 408 (409)
T ss_pred c---cCCHHHHHHHHHHHHhh
Confidence 6 24789999999988764
No 238
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.76 E-value=9.5e-17 Score=169.92 Aligned_cols=362 Identities=11% Similarity=0.035 Sum_probs=231.6
Q ss_pred hhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCccccc------CCCCC-CHHHHHHHHHHHhcCcCccc
Q 041829 35 PGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAY------YPSNS-SVAGFLGEMLSAGLNIVGFS 107 (486)
Q Consensus 35 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~------~~~~~-~~~~~~~~~l~~~~n~~~~~ 107 (486)
|+.++..-+.++|+ +.++.++++ ++++...+|.. ...|.|- +|+.. ...-...+|+++ +.+++..
T Consensus 46 P~~ir~~~~l~lp~-~~sE~e~~~---~~~~~a~kN~~---~~~fiG~G~y~~~~P~vi~~~i~~~~~~yTa-YTPYQpE 117 (954)
T PRK12566 46 PPAIRLNRPLDLPA-ALDEQAALA---RLRGYAEQNQV---WTSLIGMGYHGTVTPTVILRNVLENPGWYTA-YTPYQPE 117 (954)
T ss_pred CHHHhcCCCCCCCC-CCCHHHHHH---HHHHHHhcCCC---ccccccccccCCcCcHHHHHHHHhCchhhhc-CCCCCch
Confidence 56666555567777 679999999 99888788765 3456662 22222 222233456666 4566666
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
.++|.....+|.+.+ +++|.|++.. +..+..++|.+-. |+.+++..... ++..+++++..|+.
T Consensus 118 isQG~Lqal~e~Qtm--i~~LtGm~va-------NASl~D~atA~aE-A~~ma~~~~~~-------k~~~~~v~~~~hP~ 180 (954)
T PRK12566 118 IAQGRLEALLNFQQM--TIDLTGLDLA-------NASLLDEATAAAE-AMALAKRVAKS-------KSNRFFVDEHCHPQ 180 (954)
T ss_pred hhhHHHHHHHHHHHH--HHHHhCchhh-------hhhhccchhHHHH-HHHHHHHHhhc-------CCCEEEECCCCCHH
Confidence 678888899999976 9999999975 5677777774433 33333322100 24568899999998
Q ss_pred HHHHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC
Q 041829 188 LQKACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG 263 (486)
Q Consensus 188 ~~~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g 263 (486)
.....+. +|+ +++. ++|++.+.++ .+.|+++.|+ ..|.+.|+++|++++|+.|
T Consensus 181 ~~~v~~t~~~~~g~---~i~~-------------~~~~~~~~~~------~~~v~vq~P~-~~G~i~d~~~i~~~~h~~g 237 (954)
T PRK12566 181 TLSVLRTRAEGFGF---ELVV-------------DAVDNLAAHA------VFGALLQYPD-THGEIRDLRPLIDQLHGQQ 237 (954)
T ss_pred HHHHHHHhhhcCCc---EEEE-------------cchhhcCCCC------EEEEEEECCC-CceEEccHHHHHHHHHHcC
Confidence 7765553 455 5543 2244433222 4567777765 6799999999999999999
Q ss_pred CEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-----cceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 264 MWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-----DCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 264 ~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-----~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
+.++ +++.--........... +||+++.+++- ++.|. ..|++.++++ + ...-|+.+.+...+.
T Consensus 238 al~~-~~~d~laL~ll~~Pge~-----GADI~vG~~Q~-fGvp~~~GGP~ag~~a~~~~--~---~R~~PGRivG~s~D~ 305 (954)
T PRK12566 238 ALAC-VAADLLSLLVLTPPGEL-----GADVVLGSTQR-FGVPMGYGGPHAAYFACRDD--Y---KRAMPGRIIGVSRDA 305 (954)
T ss_pred CEEE-EEeCHHHHhCCCChhhc-----CCcEEeeCCCc-CCCCCCCCCCCeeeeeehHH--H---HhhCCCCccceeecC
Confidence 9865 55443322222222222 89998665543 44443 4788888763 2 334466665554444
Q ss_pred CCccCCCCCccC----CCCCCC------------cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC
Q 041829 339 NMVVDYKDWQIP----LGRRFR------------SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR 402 (486)
Q Consensus 339 ~~~~~~~~~~~~----~sr~~~------------~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~ 402 (486)
.+...+. .+++ .-||-. ++.+-+.+.++|.+|++++.+++..+|.+|.+.|++ +|+++..++
T Consensus 306 ~G~~a~~-l~LqtREQHIRReKAtSNICT~qaL~A~~a~~Y~~~~Gp~Gl~~ia~~~~~~a~~l~~~l~~-~g~~~~~~~ 383 (954)
T PRK12566 306 RGNTALR-MALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAAGLEA-KGIKRLNRH 383 (954)
T ss_pred CCCeeee-hhhhHHHHHhhhccccchhhHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh-cCCccccCC
Confidence 4333332 1111 123321 122233345579999999999999999999999999 699998888
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.+..+++++.. . ..++.++..+.|.- +.. ++. ..+.+++ ...+|.+|++.+++.+.
T Consensus 384 fF~~~~v~~~~-~---------~~~~~~~a~~~~~n-~r~--~~~-~~~~~s~-de~~~~~~~~~~~~~f~ 439 (954)
T PRK12566 384 FFDTLTLEVGG-A---------QAAIIESAEAARIN-LRI--LGR-GRLGVSL-DETCDEATVARLFDIFL 439 (954)
T ss_pred ccceEEEEccC-C---------HHHHHHHHHHCCCe-eEE--eCC-CeEEEEe-CCCCCHHHHHHHHHHhc
Confidence 78888887721 1 23455555555532 221 222 3688999 99999999999999984
No 239
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=2.3e-16 Score=156.27 Aligned_cols=290 Identities=15% Similarity=0.150 Sum_probs=190.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++.+-|.+. .+++++|+.|+..++.+..+ +++.|+++...|.+..
T Consensus 62 gnPt~~~Le~~----la~le~~~~---------~v~~sSG~aAi~~~l~all~-----------~GD~Vlv~~~~Y~~~~ 117 (395)
T PRK05967 62 GTPTTDALCKA----IDALEGSAG---------TILVPSGLAAVTVPFLGFLS-----------PGDHALIVDSVYYPTR 117 (395)
T ss_pred CChHHHHHHHH----HHHHhCCCC---------EEEECcHHHHHHHHHHHhcC-----------CCCEEEEccCCcHHHH
Confidence 45555566666 777776443 67777788888777755433 7888999999988766
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
. .++..|+ ++..++.+ +.+.+++++++. +.+|+++.++|+++.+.||++|+++|+++|++
T Consensus 118 ~l~~~~l~~~Gi---~v~~vd~~-------~~e~l~~al~~~------TklV~lesPsNP~l~v~dl~~I~~la~~~g~~ 181 (395)
T PRK05967 118 HFCDTMLKRLGV---EVEYYDPE-------IGAGIAKLMRPN------TKVVHTEAPGSNTFEMQDIPAIAEAAHRHGAI 181 (395)
T ss_pred HHHHHHHHhcCe---EEEEeCCC-------CHHHHHHhcCcC------ceEEEEECCCCCCCcHHHHHHHHHHHHHhCCE
Confidence 4 4567788 88887532 457788888654 35899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||++|+.....-| .. -++|.+..+..|++++..+ .|++ +.++....+... +. .
T Consensus 182 vvVD~t~a~p~~~~p-l~------~GaDivv~S~tKy~~Gh~d~~~G~v-~~~~~~~~~l~~----~~-~---------- 238 (395)
T PRK05967 182 VMMDNTWATPLYFRP-LD------FGVDISIHAATKYPSGHSDILLGTV-SANEKCWPQLLE----AH-G---------- 238 (395)
T ss_pred EEEECCccCceecCh-hH------cCCCEEEEecccccCCCCCeeEEEE-EcCHHHHHHHHH----HH-H----------
Confidence 999999987543322 21 1799999999999765322 4544 444432222110 00 0
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------CceE
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFSL 406 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~~ 406 (486)
..|....+..+|..++ |.+-+.-+++++.++|..+.+.|+++|.++-+.-| ..++
T Consensus 239 ------~~G~~~~p~da~l~~r--gl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~ 310 (395)
T PRK05967 239 ------TLGLCAGPDDTYQILR--GLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGI 310 (395)
T ss_pred ------HcCCCCCHHHHHHHHc--CcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceE
Confidence 1122345566776665 77888999999999999999999999988543211 1358
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHcc------CcE--EEEe-ee---------ECCEeEEEEEecCCCCCHHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINST------GKI--FISH-TV---------LSGKYILRFAVGAPLTEWRHVNAA 468 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~--~~~~-~~---------~~~~~~lRi~~~~~~~t~~di~~~ 468 (486)
++|.+..... ...+...++.+.|.-- |.. .+.+ .. ..+ +.+|+|+ . -||.+.+
T Consensus 311 ~sf~l~~~~~---~~~~~~~~f~~~l~l~~~~~slG~~~sLi~~~~~~~~~~~~~~~~~-~liRlSv-G----lEd~~dL 381 (395)
T PRK05967 311 FSFVLAAGPE---KGKAKAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKAPYAG-PVIRLQI-G----LEDVPDL 381 (395)
T ss_pred EEEEEcCCCc---ccHHHHHHHHHhCCcceEccCCCCcceeeeeCCCChhHhhhccCCC-CeEEEEe-c----cCCHHHH
Confidence 8998863200 0023334566655321 100 0111 00 112 4799999 3 3567777
Q ss_pred HHHHHHHHHHH
Q 041829 469 WEVMQDKASAL 479 (486)
Q Consensus 469 ~~~l~~~~~~l 479 (486)
++.|.+..+.+
T Consensus 382 i~Dl~~Al~~~ 392 (395)
T PRK05967 382 KADLERGFAAA 392 (395)
T ss_pred HHHHHHHHHhh
Confidence 77777766544
No 240
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.76 E-value=8.6e-16 Score=153.28 Aligned_cols=294 Identities=10% Similarity=0.017 Sum_probs=190.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+++++ +++.++++++ +.++|+|+++++..++.+..+ +++.|++...+|+.+...+.
T Consensus 69 ~~~Lr~~----ia~~~~~~~~-------~I~it~G~~~~l~~~~~~~~~-----------~gd~vlv~~p~y~~~~~~~~ 126 (369)
T PRK08153 69 NHDLRHA----LAAHHGVAPE-------NIMVGEGIDGLLGLIVRLYVE-----------PGDPVVTSLGAYPTFNYHVA 126 (369)
T ss_pred cHHHHHH----HHHHhCCCHH-------HEEEcCCHHHHHHHHHHHhcC-----------CCCEEEECCCcchHHHHHHH
Confidence 4556666 6677787664 588888888776655544332 67889999999999998888
Q ss_pred HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEeecc
Q 041829 194 IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVDAA 271 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD~A 271 (486)
.+|. +++.+|.+.+ .+|++++.+++.... +.+|+++.++|+||.+-+.+++.++++.. ++|+++|.+
T Consensus 127 ~~g~---~~~~vp~~~~---~~~~~~l~~~~~~~~-----~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~ 195 (369)
T PRK08153 127 GFGG---RLVTVPYRDD---REDLDALLDAARREN-----APLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEA 195 (369)
T ss_pred HcCC---eEEEeeCCCC---CCCHHHHHHHhcccC-----CcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCc
Confidence 8999 9999998643 689998887765321 34677789999999999988887777654 899999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
|+.+... ..... +.....--.+..++.|.++.| .-+|+++.. ++.+. .+.....+.
T Consensus 196 y~~~~~~-~~~~~-~~~~~~~~i~~~SfSK~~g~~GlRiG~~v~~-~~~~~-~l~~~~~~~------------------- 252 (369)
T PRK08153 196 YCETAPA-GAAPP-IDTDDPNVIRMRTFSKAYGLAGARVGYAIGA-PGTIK-AFDKVRNHF------------------- 252 (369)
T ss_pred hhhhcCc-ccchh-hhhcCCCEEEEecchHhccCcchheeeeecC-HHHHH-HHHHhhcCC-------------------
Confidence 9754321 11111 111111124466789999755 446887764 33332 221111100
Q ss_pred CCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLL 429 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 429 (486)
....+..+++...+. .+.+++..++..++.+++.+.|++. ++... ++..+++.+.+... .....++.
T Consensus 253 ---~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-g~~~~-p~~~~f~~~~~~~~-------~~~a~~l~ 320 (369)
T PRK08153 253 ---GMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIARAN-GLTPL-PSATNFVAIDCGRD-------GAFARAVL 320 (369)
T ss_pred ---CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCcCcEEEEECCCC-------cccHHHHH
Confidence 012233344444432 3446667777778888888889876 67644 45555555554311 12346788
Q ss_pred HHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 430 DDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
++|.+.|..+-.+....+..++|+++ . +++|+++++++|+++...+
T Consensus 321 ~~l~~~Gi~v~~p~~~~~~~~iRis~-~---~~~~~~~~~~al~~~~~~~ 366 (369)
T PRK08153 321 DGLIARDIFVRMPGVAPLDRCIRVSC-G---PDEELDLFAEALPEALEAA 366 (369)
T ss_pred HHHHHCCeEEeeCCCCCCCCeEEEec-C---CHHHHHHHHHHHHHHHHHh
Confidence 88888884432343323446999998 3 6899999999999887644
No 241
>PLN02368 alanine transaminase
Probab=99.76 E-value=5.9e-16 Score=155.25 Aligned_cols=281 Identities=10% Similarity=0.004 Sum_probs=186.8
Q ss_pred HHHHHHHHHHHhc--CcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGL--NIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALK 166 (486)
Q Consensus 89 ~~~~~~~~l~~~~--n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 166 (486)
++..+.+.+.... +.....|....+..++.+++.+|+.+.+|++.+ ..+.++|+|+++++..++.+....
T Consensus 82 p~~~i~~a~~~l~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~-----~~~I~it~Ga~~al~~~~~~l~~~--- 153 (407)
T PLN02368 82 PADAIARAKHYLSLTSGGLGAYSDSRGLPGVRKEVAEFIERRDGYPSD-----PELIFLTDGASKGVMQILNAVIRG--- 153 (407)
T ss_pred CHHHHHHHHHHHhcCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCC-----hhhEEEcccHHHHHHHHHHHHcCC---
Confidence 3455555544321 222345666667789999999999998886432 126899999999987777654311
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|+++...+..+...++..|. +++.+|++.+++|.+|+++|++++++...++.++.+++++.++|+|
T Consensus 154 -------pGd~Vli~~P~Y~~y~~~~~~~g~---~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPT 223 (407)
T PLN02368 154 -------EKDGVLVPVPQYPLYSATISLLGG---TLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPT 223 (407)
T ss_pred -------CCCEEEEeCCCCccHHHHHHHcCC---EEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCC
Confidence 678899999999999999999999 9999999876568999999999997644344456788999999999
Q ss_pred cccC---ChHHHHHHHHHhCCEEEeeccccchhccCc-cc---hhcccCC----c-CCCce-eeeccccc-C-CCCcceE
Q 041829 247 TAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICP-EY---RQYIDGV----E-EADSF-NMNAHKWF-L-TNFDCSA 311 (486)
Q Consensus 247 G~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~-~~---~~~~~~~----~-~aDs~-~~~~hK~l-~-~p~~~g~ 311 (486)
|.+- .+++|+++|++||+|+++|.+|+.+.+... .+ ......+ + ....+ ..++.|.+ + ...-+|+
T Consensus 224 G~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy 303 (407)
T PLN02368 224 GQCLSEANLREILKFCYQERLVLLGDEVYQQNIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGY 303 (407)
T ss_pred CccCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEE
Confidence 9994 467888889999999999999987553211 11 1111111 1 11233 45679987 3 4456888
Q ss_pred EEE--eCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-----h-------hhHHHHHH
Q 041829 312 LWV--KDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-----L-------ENLQGYIR 377 (486)
Q Consensus 312 l~~--r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-----~-------~g~~~~~~ 377 (486)
++. .++..+....... . .. . ....+..+++...+. . +..+++++
T Consensus 304 ~i~~~~~~~li~~~~~~~-~-~~------------------~--~~~~~~Q~aa~~~l~~~~~~~~~~~~~~~~~~~~~~ 361 (407)
T PLN02368 304 FEMTNIPPKTVEEIYKVA-S-IA------------------L--SPNVSGQIFMGLMVNPPKPGDISYDQFVRESKGILE 361 (407)
T ss_pred EEEeCCCHHHHHHHHHHh-c-cc------------------C--CCCcHHHHHHHHHhCCCCCCCccHHHHHHHHHHHHH
Confidence 875 3444333222111 0 00 0 012233344443332 1 11234677
Q ss_pred HHHHHHHHHHHHHhcCCCeEEecCCCceEEEEE
Q 041829 378 NHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFR 410 (486)
Q Consensus 378 ~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~ 410 (486)
...++++.+.+.|+++||+.+. +|+..++.|-
T Consensus 362 ~~~~rr~~~~~~L~~~~g~~~~-~P~Gafy~~~ 393 (407)
T PLN02368 362 SLRRRARMMTDGFNSCKNVVCN-FTEGAMYSFP 393 (407)
T ss_pred HHHHHHHHHHHHHhCCCCeEeC-CCCeeeEecc
Confidence 8888999999999999998875 5776766653
No 242
>PRK06460 hypothetical protein; Provisional
Probab=99.76 E-value=4.8e-16 Score=154.78 Aligned_cols=287 Identities=17% Similarity=0.154 Sum_probs=183.3
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc---
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH--- 185 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--- 185 (486)
...|...++|+. +++++|.+. .+++++|++++..++.+... +++.|+++...+
T Consensus 42 ~~~p~~~~L~~~----lA~l~g~~~---------~v~~~sG~~ai~~~l~al~~-----------~Gd~Vl~~~~~~~~t 97 (376)
T PRK06460 42 EANPTVLELTKK----IVELENAEM---------GVAFSSGMGAISTTALALLK-----------PGNSVLVHRDMFGRS 97 (376)
T ss_pred CCCccHHHHHHH----HHHHhCCCc---------EEEeCCHHHHHHHHHHHHhC-----------CCCEEEEecCCcCcH
Confidence 356777888887 899999864 45667778877766654422 566777775433
Q ss_pred -hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 186 -SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 186 -~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
..+...++..|+ +++.++.+. .+.+++.+++ ++.+|+++.++|++|.+.|+++|+++|+++|+
T Consensus 98 y~~~~~~~~~~G~---~v~~~~~~~-------~~~l~~~~~~------~tklV~l~sp~NPtG~v~d~~~I~~la~~~g~ 161 (376)
T PRK06460 98 YRFFTDYLKNWGV---NVDASNPGS-------DNIIEKAKSK------RYDVVFVENITNPLLRVVDITELSKVCKENGS 161 (376)
T ss_pred HHHHHHHHHhhCc---EEEEECCCC-------HHHHHHhcCC------CceEEEEECCCCCCCcccCHHHHHHHHHHcCC
Confidence 334567788898 888877542 2234333222 25689999999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
+++||++|+.+... ... ..++|.++.+++|+++++.+ .|+++ .+++...+.......+
T Consensus 162 ~vivDea~~~~~~~----~~l---~~~~divv~S~sK~l~G~~~~~~G~~~-~~~~l~~~l~~~~~~~------------ 221 (376)
T PRK06460 162 ILIVDATFSTPINQ----KPL---ELGADIVVHSASKFLAGHNDVIAGLAA-GYGKLLNVIDQMRRTL------------ 221 (376)
T ss_pred EEEEECCcCccccC----Chh---hcCCCEEEeecceeccCCCCceEEEEe-cCHHHHHHHHHHHHhc------------
Confidence 99999999754211 111 12589999999999875532 56554 4444332221111111
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Cce
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFS 405 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~ 405 (486)
+....+..+|.+++ |.+.++.++++..++++++.+.|+++|.++-+.-| ..+
T Consensus 222 ---------g~~~~~~~a~~~l~--~~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg 290 (376)
T PRK06460 222 ---------GTSLDPHAAYLTLR--GIKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGG 290 (376)
T ss_pred ---------CCCCCHHHHHHHHh--chhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCce
Confidence 11122345566655 56788999999999999999999999987544211 246
Q ss_pred EEEEEecCCCCCcccchHHHHHHHHHHHc------cCcE--EE-Eeee-----E-------CC--EeEEEEEecCCCCCH
Q 041829 406 LVCFRLLPPHNDEDHGNKLNHKLLDDINS------TGKI--FI-SHTV-----L-------SG--KYILRFAVGAPLTEW 462 (486)
Q Consensus 406 ~v~f~~~~~~~~~~~~~~~~~~l~~~l~~------~g~~--~~-~~~~-----~-------~~--~~~lRi~~~~~~~t~ 462 (486)
+++|.+... .+...++.+.|.- =|.. .+ .+.. . .| .+.+|+|+ --
T Consensus 291 ~~s~~~~~~-------~~~~~~~~~~l~~~~~~~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~sv-----Gl 358 (376)
T PRK06460 291 VLSFEVNGG-------QESALKVMKSLKLIIPAQTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSV-----GI 358 (376)
T ss_pred EEEEEEcCc-------HHHHHHHHHhCCcceeccCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEe-----cc
Confidence 888888631 1223456665531 0111 11 1110 0 01 35799999 34
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASA 478 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~ 478 (486)
||.+.+++.|++....
T Consensus 359 E~~~dl~~dl~~al~~ 374 (376)
T PRK06460 359 EDVNDLIEDLDRALST 374 (376)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 5677777777776654
No 243
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.76 E-value=2e-16 Score=149.20 Aligned_cols=314 Identities=15% Similarity=0.082 Sum_probs=210.9
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecC---
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASD--- 182 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~--- 182 (486)
-.|..+.-..++|..+.+...+|||.+.. .+=.-||+.||+.+..+..+ +++.|+.-+
T Consensus 62 RyYgGce~VD~vE~laierak~LFga~~a--------nVQPhSGs~AN~av~~All~-----------pGDtimgm~l~~ 122 (413)
T COG0112 62 RYYGGCEYVDEVEELAIERAKKLFGAEYA--------NVQPHSGSQANQAVYLALLQ-----------PGDTIMGLDLSH 122 (413)
T ss_pred cccCCCeeHHHHHHHHHHHHHHHhCCCcc--------ccCCCCchHHHHHHHHHHcC-----------CCCeEecccCCC
Confidence 35667778899999999999999999864 45566789999988877665 677776543
Q ss_pred CCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 183 QTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 183 ~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
..|-+.-......|.- -+++..++|++ ++.||.|++++.+.+.+ |.+|++ |.+..-..-|++++.+||++.
T Consensus 123 GGHltHg~~v~~sG~~-~~~v~Y~vd~e-t~~IDyD~~~k~a~e~k-----PK~ii~--G~SaY~r~id~~~~reIad~V 193 (413)
T COG0112 123 GGHLTHGSPVNFSGKL-FNVVSYGVDPE-TGLIDYDEVEKLAKEVK-----PKLIIA--GGSAYSRPIDFKRFREIADEV 193 (413)
T ss_pred CCcccCCCCCCcccee-EEeEecccccc-cCccCHHHHHHHHHHhC-----CCEEEE--CccccccccCHHHHHHHHHHh
Confidence 3454443222233321 16677788865 47999999999988764 777654 555666778999999999999
Q ss_pred CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 263 GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 263 g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
|+++.+|.||-.+.+....+..- +..||.++.+.||+|.+|. .|++++++.+...+.-+..-+
T Consensus 194 GA~L~~DmAHiaGLVA~G~~p~P---~~~AdvVTtTTHKTlrGPr-GG~Il~~~eel~kkin~aVFP------------- 256 (413)
T COG0112 194 GAYLMVDMAHVAGLIAGGVHPNP---LPHADVVTTTTHKTLRGPR-GGIILTNDEELAKKINSAVFP------------- 256 (413)
T ss_pred CceEEehHHHHHHHHhcccCCCC---CCccceEeCCcccCCCCCC-ceEEEeccHHHHHHhhhhcCC-------------
Confidence 99999999998777655444432 4579999999999999996 588888875433322111111
Q ss_pred CCCCCccCCCCCCC-cHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEecCCCCCccc
Q 041829 343 DYKDWQIPLGRRFR-SLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPHNDEDH 420 (486)
Q Consensus 343 ~~~~~~~~~sr~~~-~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~~~~~~ 420 (486)
.++++-... ..+...+++..-.-+|++..++..++|+.|.+.|.+. |++++. -.+..++.+.+.+.+..
T Consensus 257 -----g~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~-G~~vvsGgTdnHl~lVDl~~~~~~--- 327 (413)
T COG0112 257 -----GLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKER-GFKVVSGGTDNHLVLVDLRSKGLT--- 327 (413)
T ss_pred -----ccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHc-CCeEecCCccceEEEEEcccCCCC---
Confidence 122332222 2244556676667888999999999999999999996 999985 34566777776643211
Q ss_pred chHHHHHHHHHHHccCcEEEEee--eE-----CCEeEEEEEe---cCCCCCHHHHHHHHHHHHHHHHH
Q 041829 421 GNKLNHKLLDDINSTGKIFISHT--VL-----SGKYILRFAV---GAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~--~~-----~~~~~lRi~~---~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
. ++.-..|.+.| +.+.-- ++ .....+||.. +.....++|++++.+.|.+++..
T Consensus 328 -G---k~ae~~L~~~~-It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~ 390 (413)
T COG0112 328 -G---KKAEAALERAG-ITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDG 390 (413)
T ss_pred -H---HHHHHHHHHcC-EeeccCCCCCCCCCCCCCccceeccHHHhhcCCCHHHHHHHHHHHHHHHhc
Confidence 1 12222233334 222111 11 1235789865 23344678888888887776653
No 244
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.75 E-value=1.9e-15 Score=152.93 Aligned_cols=326 Identities=13% Similarity=0.064 Sum_probs=200.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.++...++|++ +++++|.+. .++++|||+++..++.++...+....+. .+++.|+++..+|.+..
T Consensus 61 ~G~~~~~fe~~----lA~~~g~~~---------~v~~~sGt~al~~aL~al~~~~~~~~~~--~pGd~VIv~~~t~~a~~ 125 (438)
T PRK15407 61 TGRFNDAFEKK----LAEFLGVRY---------ALLVNSGSSANLLAFSALTSPKLGDRAL--KPGDEVITVAAGFPTTV 125 (438)
T ss_pred CChhHHHHHHH----HHHHhCCCe---------EEEECCHHHHHHHHHHHHhhccccccCC--CCCCEEEECCCCcHHHH
Confidence 46777888888 888888753 7899999999999887654221110000 16788999999999999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.++...|+ .++.++++.. ++.+|++++++++.+.+ .+|++++ ++|...++++|.++|+++|+++++|
T Consensus 126 ~~v~~~G~---~pv~vdvd~~-~~~id~~~le~~i~~~t------kaVi~~~---~~G~p~dl~~I~~la~~~gi~vIeD 192 (438)
T PRK15407 126 NPIIQNGL---VPVFVDVELP-TYNIDASLLEAAVSPKT------KAIMIAH---TLGNPFDLAAVKAFCDKHNLWLIED 192 (438)
T ss_pred HHHHHcCC---EEEEEecCCC-cCCcCHHHHHHHcCcCC------eEEEEeC---CCCChhhHHHHHHHHHHCCCEEEEE
Confidence 99999999 9999998764 47999999999986543 4566655 3677889999999999999999999
Q ss_pred ccccchhccCccchhcccCCcCCCceeee--cccccCCCCcceEEEEeCchHHHHHhcCCcccccc-------------c
Q 041829 270 AAYAGSACICPEYRQYIDGVEEADSFNMN--AHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKN-------------K 334 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aDs~~~~--~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~-------------~ 334 (486)
+||+.+...... ..|. ..|..+++ +.|.+.+. ..|+++++++....+..... .+=.. .
T Consensus 193 aa~a~G~~~~g~----~~G~-~gd~~~fSf~~~k~~~~g-eGG~l~t~d~~l~~~~~~~~-~~G~~~~~~~~~~~~~~~~ 265 (438)
T PRK15407 193 NCDALGSTYDGR----MTGT-FGDIATLSFYPAHHITMG-EGGAVFTNDPLLKKIIESFR-DWGRDCWCAPGCDNTCGKR 265 (438)
T ss_pred CccchhhhcCCe----eeec-cCceEEEeCCCCCCcccc-CceEEEECCHHHHHHHHHHH-HhCcccccccccccccccc
Confidence 999876644221 1111 13555555 44656543 35888888876443221111 00000 0
Q ss_pred ccccCC--ccCC-CCC-ccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCe-EEec-CCCc----
Q 041829 335 ASQANM--VVDY-KDW-QIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRF-EVVT-PRIF---- 404 (486)
Q Consensus 335 ~~~~~~--~~~~-~~~-~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~-~~~~-~~~~---- 404 (486)
.....+ ...+ ..+ ....|-.++.-.+.+++-....+.+.+++++.+++++++.+.|+.+++. .+.. ++..
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~G~n~rmsel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~~~~~~~~~~~~~~~ 345 (438)
T PRK15407 266 FGWQLGELPFGYDHKYTYSHLGYNLKITDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDFLILPEATPNSDPSW 345 (438)
T ss_pred cccccccccccccccccccccccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCccccCcCCCCCeeEE
Confidence 000000 0000 000 0012333333344455544456778899999999999999999988753 3322 1121
Q ss_pred eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEE---E-eee----EC----------------CEeEEEEEecCCCC
Q 041829 405 SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFI---S-HTV----LS----------------GKYILRFAVGAPLT 460 (486)
Q Consensus 405 ~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~---~-~~~----~~----------------~~~~lRi~~~~~~~ 460 (486)
..+.+.+.+.. .....++.+.|.++|+-.- . +.. +. ....+-+-+ ++..
T Consensus 346 ~~~~i~~~~~~------~~~Rd~l~~~L~~~GI~~~~~~~~~~~~~p~~~~~~~~~~~~~P~ae~~~~~~l~LP~-~~~l 418 (438)
T PRK15407 346 FGFPITVKEDA------GFTRVELVKYLEENKIGTRLLFAGNLTRQPYFKGVKYRVVGELTNTDRIMNDTFWIGV-YPGL 418 (438)
T ss_pred EEEEEEECCcC------CCCHHHHHHHHHHCCCCccccCCCccccChhhhhcCCCCCCCChHHHHHHhCeEEecC-CCCC
Confidence 12333333210 1113567777877774211 1 100 00 012333333 6677
Q ss_pred CHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~ 477 (486)
|++|+++++++|+++.+
T Consensus 419 ~~~~v~~i~~~i~~~~~ 435 (438)
T PRK15407 419 TEEMLDYVIEKIEEFFG 435 (438)
T ss_pred CHHHHHHHHHHHHHHHh
Confidence 99999999999998764
No 245
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.75 E-value=1.8e-17 Score=146.29 Aligned_cols=166 Identities=25% Similarity=0.181 Sum_probs=127.3
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH-HHHHHhCCC
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ-KACQIGGIH 198 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~-~a~~~~g~g 198 (486)
++.++++++++.+.+ .+++++|||+|+..++.+++. ++..|+++...|++.. ..+...|.
T Consensus 4 ~~~~~l~~~~~~~~~-------~~~~~~~~t~a~~~~~~~~~~-----------~~~~v~~~~~~~~~~~~~~~~~~g~- 64 (170)
T cd01494 4 ELEEKLARLLQPGND-------KAVFVPSGTGANEAALLALLG-----------PGDEVIVDANGHGSRYWVAAELAGA- 64 (170)
T ss_pred HHHHHHHHHcCCCCC-------cEEEeCCcHHHHHHHHHHhCC-----------CCCEEEEeecccceehhhHHHhcCC-
Confidence 455669999963332 588999999999988887654 4567888888998888 88888899
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
+++.++.+.++....+.+.+++.. ...+|.+++++.+++++|...|+++|+++|+++|+++|+|++|+++...
T Consensus 65 --~~~~v~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~ 137 (170)
T cd01494 65 --KPVPVPVDDAGYGGLDVAILEELK-----AKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASP 137 (170)
T ss_pred --EEEEeccCCCCccchhhhhhhhcc-----ccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEeccccccccc
Confidence 999999876542233332333321 2345789999999999999999999999999999999999999887665
Q ss_pred CccchhcccCCcCCCceeeecccccCCCCcceEEEEe
Q 041829 279 CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVK 315 (486)
Q Consensus 279 ~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r 315 (486)
.+... ....++|+++.++||+++. .++|++++|
T Consensus 138 ~~~~~---~~~~~~d~~~~s~~K~~~~-~~~G~l~~~ 170 (170)
T cd01494 138 APGVL---IPEGGADVVTFSLHKNLGG-EGGGVVIVK 170 (170)
T ss_pred ccccc---cccccCCEEEEEcccccCC-CceEEEEeC
Confidence 42211 1123699999999999998 689999875
No 246
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.75 E-value=7e-16 Score=143.94 Aligned_cols=313 Identities=16% Similarity=0.192 Sum_probs=205.7
Q ss_pred cCcCccccc--cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEE
Q 041829 101 LNIVGFSWI--TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVV 178 (486)
Q Consensus 101 ~n~~~~~~~--~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v 178 (486)
++..+..|. +.|....+|++ ++.|=|-- .++.+++|..|..+|+..... .++.|
T Consensus 49 l~~~G~iYsRi~NPT~~vlE~R----iAaLEGG~---------aa~a~aSG~AA~~~ai~~la~-----------aGD~i 104 (426)
T COG2873 49 LKEPGNIYTRIMNPTTDVLEER----IAALEGGV---------AALAVASGQAAITYAILNLAG-----------AGDNI 104 (426)
T ss_pred CCcCCceeeeccCchHHHHHHH----HHHhhcch---------hhhhhccchHHHHHHHHHhcc-----------CCCee
Confidence 344444443 78899999999 67766532 367788888888888875544 67778
Q ss_pred EecCCCc----hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHH
Q 041829 179 YASDQTH----SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLA 254 (486)
Q Consensus 179 ~~s~~~H----~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~ 254 (486)
+.+..-+ .-+....+.+|+ +++.|+.+ |++.++++|+++++ +|.+..-.||.+.+-|+++
T Consensus 105 Vss~~LYGGT~~lf~~tl~~~Gi---~v~fvd~~-------d~~~~~~aI~~nTk------avf~EtigNP~~~v~Die~ 168 (426)
T COG2873 105 VSSSKLYGGTYNLFSHTLKRLGI---EVRFVDPD-------DPENFEAAIDENTK------AVFAETIGNPGLDVLDIEA 168 (426)
T ss_pred EeeccccCchHHHHHHHHHhcCc---EEEEeCCC-------CHHHHHHHhCcccc------eEEEEeccCCCccccCHHH
Confidence 7766554 234456688899 99998743 79999999999886 6888888899999999999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCch-HHHHHhcCCccccc
Q 041829 255 LGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRN-TLIQSLSTNPEFLK 332 (486)
Q Consensus 255 I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~-~~~~~~~~~~~yl~ 332 (486)
|++|||++|+.++||...+..+++-| .++ +||.++-+.-||+++- ...|.+++-... .+.. ..+-+.+.
T Consensus 169 ia~iAh~~gvpliVDNT~atpyl~rP-~~h------GADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~--~~rfP~~~ 239 (426)
T COG2873 169 IAEIAHRHGVPLIVDNTFATPYLCRP-IEH------GADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTA--NGRFPEFT 239 (426)
T ss_pred HHHHHHHcCCcEEEecCCCcceecch-hhc------CCCEEEEeecccccCCccccceEEEeCCcccccc--CCCCcccC
Confidence 99999999999999999988754433 333 8999999999999764 335555554322 1110 11111111
Q ss_pred ccccccCCccCCCC--------------CccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 333 NKASQANMVVDYKD--------------WQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 333 ~~~~~~~~~~~~~~--------------~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
.... ++....+.+ +....|.....+.+|..++ |.|-+.-+++|+.++|..+.+.|+++|.+.-
T Consensus 240 ~p~p-~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lq--GlETL~LRmerH~~NA~~vA~~L~~HpkV~~ 316 (426)
T COG2873 240 TPDP-SYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQ--GLETLSLRMERHCENALKVAEFLENHPKVAW 316 (426)
T ss_pred CCCc-cccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHh--chhhhHHHHHHHHHhHHHHHHHHhcCCCeee
Confidence 1110 000000000 0011222234455665554 7888999999999999999999999999987
Q ss_pred ecCC------------------CceEEEEEecCCCCCcccchHHHHHHHHHH------Hc---cCcEEEEeee--E---C
Q 041829 399 VTPR------------------IFSLVCFRLLPPHNDEDHGNKLNHKLLDDI------NS---TGKIFISHTV--L---S 446 (486)
Q Consensus 399 ~~~~------------------~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l------~~---~g~~~~~~~~--~---~ 446 (486)
++-| ...+++|.++.. .+-.+++.+.| .. .....+.|.. . .
T Consensus 317 V~YpgL~~~~~h~la~kyl~~g~g~vltF~~kgg-------~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~ 389 (426)
T COG2873 317 VNYPGLASHPYHALAKKYLPKGAGAVLTFGVKGG-------YEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLS 389 (426)
T ss_pred eecCCCCCCcchhHHHhhccCCCceEEEEEecCh-------HHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCC
Confidence 6532 134778887642 22223443333 22 2234454421 1 0
Q ss_pred ---------CEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 447 ---------GKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 447 ---------~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
....+|+|+ --||++.++..|++.++
T Consensus 390 ~ee~~~aGv~~~~IRlSV-----GIEd~~DiiaDl~qAl~ 424 (426)
T COG2873 390 EEEQAAAGVTPDLIRLSV-----GIEDIDDIIADLEQALE 424 (426)
T ss_pred HHHHHhcCCCCCcEEEEe-----ccCCHHHHHHHHHHHHh
Confidence 236899999 35678888888887654
No 247
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.75 E-value=4.4e-16 Score=152.96 Aligned_cols=273 Identities=16% Similarity=0.070 Sum_probs=174.5
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++.+++++++|.+++ ..++|+|+++++..+ ..+.. ++ .|++...+|..+...++..|+
T Consensus 50 ~~lr~~la~~~~~~~~-------~i~~t~G~~~~i~~~-~~~l~-----------~g-~vl~~~p~y~~~~~~~~~~g~- 108 (330)
T TIGR01140 50 DELRAAAAAYYGLPAA-------SVLPVNGAQEAIYLL-PRLLA-----------PG-RVLVLAPTYSEYARAWRAAGH- 108 (330)
T ss_pred HHHHHHHHHHhCCChh-------hEEECCCHHHHHHHH-HHHhC-----------CC-eEEEeCCCcHHHHHHHHHcCC-
Confidence 3344558888887654 578888877765553 32221 44 467778889999999999999
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEeeccccch
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~ 275 (486)
+++.+| |++.|++++++ +.+|+++.++|+||.+-+ +++|+++|+++|+++++|.+|..+
T Consensus 109 --~~~~~~---------d~~~l~~~~~~-------~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~ 170 (330)
T TIGR01140 109 --EVVELP---------DLDRLPAALEE-------LDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDF 170 (330)
T ss_pred --EEEEeC---------CHHHHHhhccc-------CCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECccccc
Confidence 887776 78888887732 236788899999999988 667788899999999999999765
Q ss_pred hccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC
Q 041829 276 ACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 354 (486)
... +...... +...-+.++.+++|+++.| ..+|+++..+. .+.........+ .
T Consensus 171 ~~~-~~~~~~~-~~~~~~i~~~S~SK~~g~~G~R~G~i~~~~~-~~~~l~~~~~~~-----------------------~ 224 (330)
T TIGR01140 171 TPD-ASLAPQA-ARFPGLVVLRSLTKFFGLAGLRLGFVVAHPA-LLARLREALGPW-----------------------T 224 (330)
T ss_pred CCc-cchhhHh-ccCCCEEEEEecchhhcCchhhhhheeCCHH-HHHHHHhcCCCC-----------------------C
Confidence 421 1111111 1113357788999999855 55788887543 333221111110 0
Q ss_pred CCcHHHHHHHHHhChh-hHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 355 FRSLKLWMVLRLYGLE-NLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 355 ~~~l~~~~~l~~~g~~-g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
...+...++.+.+... ..+...++..++.+++.+.|++++.+++. ++...++.+.+.. ..++.++|.
T Consensus 225 ~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~~~-~~~~~f~~~~~~~-----------~~~l~~~l~ 292 (330)
T TIGR01140 225 VNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGGLEVV-GGTALFLLVRTPD-----------AAALHEALA 292 (330)
T ss_pred chHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCCceEC-CCCCeEEEEEcCC-----------HHHHHHHHH
Confidence 1223333444443322 33566778888999999999998666654 3343444444321 146788888
Q ss_pred ccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 434 STGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 434 ~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+.|.+...+..+. +..++|++++ +..++ ++++++|
T Consensus 293 ~~gi~v~pg~~f~~~~~~~iRi~~~---~~~~~-~~~~~~l 329 (330)
T TIGR01140 293 RRGILIRDFDNFPGLDPRYLRFALP---TDEEN-DRLEEAL 329 (330)
T ss_pred HCCEEEEECCCCCCCCCCEEEEEec---CHHHH-HHHHHhh
Confidence 8875444444443 3469999993 23355 8888776
No 248
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.75 E-value=2.3e-15 Score=150.58 Aligned_cols=318 Identities=12% Similarity=0.047 Sum_probs=195.9
Q ss_pred HHHHHHHHhcCcC--ccccccChhhHHHHHHHHHHHHHHcC----CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHH
Q 041829 92 FLGEMLSAGLNIV--GFSWITSPAATELEMIVLDWLAKLLK----LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKAL 165 (486)
Q Consensus 92 ~~~~~l~~~~n~~--~~~~~~~~~~~~le~~~~~~la~l~g----~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 165 (486)
.+.+.+...++.+ ...|. .++..++.+.+.+|+.+.+| .+.+ +.++|+|+++++..++.+...
T Consensus 45 ~~~~~~~~~~~~~~~~~~Y~-~~G~~~Lr~aia~~~~~~~~~~~~v~~~-------~I~it~Ga~~al~~~~~~~~~--- 113 (374)
T PRK02610 45 DLKQKLAWLYQQGIESNRYP-DGGHEALKQAIAEYVNESAAGSSQITPA-------NISVGNGSDELIRSLLIATCL--- 113 (374)
T ss_pred HHHHHHHHHHhhcccccCCC-CCchHHHHHHHHHHhCccccccCCCCHH-------HEEEcCChHHHHHHHHHHHcC---
Confidence 4444454444332 12343 35678888888888776653 3333 588999988887665554322
Q ss_pred HHhCccCCCC-eEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 166 KRVGKNSLEK-LVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 166 ~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
++ ..|++...++..+..+++.+|+ +++.+|++++ +|.+|+++|++++++.. ..++.+|+++.++|
T Consensus 114 --------~g~~~Vlv~~P~y~~~~~~~~~~g~---~~~~~~~~~~-~~~~d~~~l~~~~~~~~--~~~~k~i~l~~P~N 179 (374)
T PRK02610 114 --------GGEGSILVAEPTFSMYGILAQTLGI---PVVRVGRDPE-TFEIDLAAAQSAIEQTQ--NPPVRVVFVVHPNS 179 (374)
T ss_pred --------CCCCeEEEcCCChHHHHHHHHHcCC---EEEEecCCcc-cCCCCHHHHHHHHHhhc--CCCceEEEEeCCCC
Confidence 33 3688899999999999999999 9999998754 48999999999986421 12356788889999
Q ss_pred cccccCChHHHHHHHHH-hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHH
Q 041829 245 SSTAVDPLLALGNIAKS-NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQ 322 (486)
Q Consensus 245 ~tG~id~l~~I~~ia~~-~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~ 322 (486)
|||.+-+.+++.++++- +++|+++|.+|..+... +... .+..... -.+..++.|.++.| .-+|+++. ++..+..
T Consensus 180 PTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~-~~~~-~~~~~~~-~ivi~SfSK~~g~~GlRiG~~v~-~~~l~~~ 255 (374)
T PRK02610 180 PTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQT-TLVG-ELAQHPN-WVILRTFSKAFRLAAHRVGYAIG-HPELIAV 255 (374)
T ss_pred CCCCCCCHHHHHHHHhccCCcEEEEeccccccCcc-chHH-HHhcCCC-EEEEEecchhccCcccceeeeec-CHHHHHH
Confidence 99999776666655431 48999999999754321 1111 1111111 14567789999654 55888875 4433332
Q ss_pred HhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC
Q 041829 323 SLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP 401 (486)
Q Consensus 323 ~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~ 401 (486)
.......|- ...+...++...++ .+.+.+.+++..+.++.+.+.|++++++.+. +
T Consensus 256 l~~~~~~~~-----------------------~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-p 311 (374)
T PRK02610 256 LEKVRLPYN-----------------------LPSFSQLAAQLALEHRQELLAAIPEILQERDRLYQALQELPQLRVW-P 311 (374)
T ss_pred HHHhcCCCC-----------------------CCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCcEeC-C
Confidence 211111110 01122222333332 2334444455555567788888888888754 4
Q ss_pred CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 402 RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 402 ~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+..+.+.+++... . ...++.+.+.+.|. .+.+ ..+++|++++ +.+++++++++|+++.+.+
T Consensus 312 ~~g~f~~~~l~~~------~--~~~~~~~~l~~~gi-~v~~----~~~~lRls~~----~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 312 SAANFLYLRLSQD------A--ALAALHQALKAQGT-LVRH----TGGGLRITIG----TPEENQRTLERLQAALTQL 372 (374)
T ss_pred CcceEEEEeCCCC------C--CHHHHHHHHHHCCE-EEEe----CCCeEEEeCC----CHHHHHHHHHHHHHHHhhc
Confidence 5555555555421 1 12556777777774 4432 2358999983 3567899999998876543
No 249
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.75 E-value=6.1e-16 Score=153.88 Aligned_cols=288 Identities=12% Similarity=0.107 Sum_probs=189.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
++..++.+. +++.+|.+++ +.++|+|+++++..++.+..+ +++.|+++..++..+...
T Consensus 64 ~g~~~Lr~a----ia~~~~~~~~-------~I~vt~Gs~e~i~~~~~~l~~-----------~gd~vlv~~P~y~~~~~~ 121 (366)
T PRK01533 64 GGATTLRQT----IANKLHVKME-------QVLCGSGLDEVIQIISRAVLK-----------AGDNIVTAGATFPQYRHH 121 (366)
T ss_pred CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEcCCcHHHHHHH
Confidence 344556555 6777788765 689999999988777665433 677899999999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHH---HHhCCEEEe
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIA---KSNGMWFHV 268 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia---~~~g~~lhv 268 (486)
++..|+ +++.||.+. +.+|+++|++++++. +.+|+++.++|+||.+-+.+++.+++ ++++ ++++
T Consensus 122 ~~~~g~---~v~~v~~~~---~~~d~~~l~~~~~~~------~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~ii 188 (366)
T PRK01533 122 AIIEGC---EVKEVALNN---GVYDLDEISSVVDND------TKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVI 188 (366)
T ss_pred HHHcCC---EEEEeecCC---CCcCHHHHHHHhCcC------CcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEE
Confidence 999999 999999862 479999999988643 34678889999999998866665555 4555 6778
Q ss_pred eccccchhccCccchhcccCCcCC--CceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEA--DSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~a--Ds~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
|.+|..+... ......+..+... -.+..++.|.++.| .-+|+++. ++..+........+|
T Consensus 189 De~y~~~~~~-~~~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiG~~i~-~~~~~~~l~~~~~~~--------------- 251 (366)
T PRK01533 189 DEAYYEYVTA-KDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVG-HEELIEKLNVVRLPF--------------- 251 (366)
T ss_pred EccHHHhhcc-ccCcchhHHhccCCCEEEEeCchHHhcChHHHHhHHhC-CHHHHHHHHHhcCCC---------------
Confidence 9999754321 1111111111111 24566778988744 44677654 333332221111111
Q ss_pred CCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHH
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKL 424 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~ 424 (486)
....+...++...+. .+..++..+...+..+++.+.++.+ ++++. ++..+.+.+++..
T Consensus 252 --------~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~-g~~~~-~~~~nf~~~~~~~----------- 310 (366)
T PRK01533 252 --------NVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN-EIPFY-QSQTNFIFLPVEN----------- 310 (366)
T ss_pred --------CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-CCccC-CCcCcEEEEeCCC-----------
Confidence 112334444444443 3445566666777788888888887 77765 5667777776531
Q ss_pred HHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 425 NHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 425 ~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
...+.+.|.+.|. .+.+ + ..++||+++ +.++.++++++|+++.+...+
T Consensus 311 ~~~~~~~l~~~GI-~Vr~--~--~~~iRis~~----~~~~~~~l~~al~~~~~~~~~ 358 (366)
T PRK01533 311 GGEIYEACAHAGF-IIRP--F--PNGVRITVG----TREQNEGVISVLQQHFENKKR 358 (366)
T ss_pred HHHHHHHHHHCCc-EEcc--C--CCceEEeCC----CHHHHHHHHHHHHHHHHhccc
Confidence 1457777888884 4444 2 257999982 679999999999988765543
No 250
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.75 E-value=2.2e-15 Score=151.79 Aligned_cols=298 Identities=15% Similarity=0.111 Sum_probs=176.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
+...+++++ |+++.+.+ ..+++++||+||..|+..+|.......+....+..+|......|-+...+
T Consensus 82 ~~~~~l~~~----l~~~~~~~---------~~~~~~SGseA~e~Alk~a~~~~~~~~g~~~~r~~ii~~~~~~HG~~~~~ 148 (396)
T PRK04073 82 DQLGPWYEK----VAKLTGKD---------MVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAA 148 (396)
T ss_pred HHHHHHHHH----HHhcCCCC---------eEEEcCChHHHHHHHHHHHHHHhhhccCCCCCCCEEEEECCCcCCCCHHH
Confidence 334445544 77777643 37999999999999999998642211010000233455556667766666
Q ss_pred HHHhCCCC---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHH
Q 041829 192 CQIGGIHP---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNI 258 (486)
Q Consensus 192 ~~~~g~g~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~i 258 (486)
..+.+-.. ..+..+|. -|+++|++++++. +.+|+++.+.+++|.+-| +++|.++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~i~~~------~~~viiep~~~~~G~~~~~~~~l~~l~~l 215 (396)
T PRK04073 149 VSLSSEEEYKRGFGPMLPGIKKIPY-------GDLEALKAAITPN------TAAFLVEPIQGEAGINIPPEGFLKAAREL 215 (396)
T ss_pred HhhcCCcccccCCCCCCCCceEeCC-------CCHHHHHHhcccC------eEEEEEcCccCCCCCccCCHHHHHHHHHH
Confidence 55444210 01222221 2788998888543 357888888899999865 8999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccc
Q 041829 259 AKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQ 337 (486)
Q Consensus 259 a~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~ 337 (486)
|+++|+++++|++|.++......+.....++ ..|.+++ .|.++.+ ..+|+++.++ + +.+.+.... ..
T Consensus 216 ~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~-~pdi~~~--sK~lg~gg~~ig~~~~~~-~-i~~~~~~~~----~~--- 283 (396)
T PRK04073 216 CKEENVLFIADEIQTGLGRTGKLFACDWDNV-TPDMYIL--GKALGGGVFPISCVAANR-D-ILGVFTPGS----HG--- 283 (396)
T ss_pred HHHcCCEEEEecchhCCCcCcHHHHhhhcCC-CCCEEEe--cccccCCCCcceEEEEcH-H-HHhhhcCCC----CC---
Confidence 9999999999999987432111111011122 3677775 5988766 5678887654 2 222221100 00
Q ss_pred cCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC--CCeEEecCCCceEEEEEecCCC
Q 041829 338 ANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD--LRFEVVTPRIFSLVCFRLLPPH 415 (486)
Q Consensus 338 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~--~~~~~~~~~~~~~v~f~~~~~~ 415 (486)
. + -++.+.....+.++|+.+-.+ .+.++..++.++|.+.|+++ +.+..+ ++...++.+.+..
T Consensus 284 -------~--t-~~~~~~~~aaa~aaL~~~~~~---~l~~~~~~~~~~l~~~L~~l~~~~i~~~-~~~g~~~~~~~~~-- 347 (396)
T PRK04073 284 -------S--T-FGGNPLACAVSIAALEVLEEE---KLPERSLELGEYFKEQLKEIDNPMIKEV-RGRGLFIGVELNE-- 347 (396)
T ss_pred -------C--C-CCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhcCCcccce-ecceEEEEEEecc--
Confidence 0 0 011111222333444433222 34466677899999999876 222222 2334455555532
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
....+.++|.+.| +++.+. +..++|+++ +...|++|+++++++|+++.
T Consensus 348 --------~~~~~~~~l~~~G-v~~~~~---~~~~iRi~p-~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 348 --------PARPYCEALKEEG-LLCKET---HETVIRFAP-PLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred --------hHHHHHHHHHHCC-eEEecC---CCCEEEEEC-CcccCHHHHHHHHHHHHHHh
Confidence 1246777788888 444432 235899998 77889999999999998763
No 251
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.74 E-value=1.7e-15 Score=150.72 Aligned_cols=291 Identities=10% Similarity=0.034 Sum_probs=187.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCC-eEEEecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEK-LVVYASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~ 193 (486)
.++.+. +++++|.+++ +.++|+|+++++..++.+... ++ +.|+++...+..+...++
T Consensus 62 ~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~~~-----------~g~~~vlv~~p~y~~~~~~~~ 119 (364)
T PRK04781 62 PGLRSA----LAALYGCAPE-------QLLIGRGSDEAIDLLVRALCV-----------PGRDAVLVTPPVFGMYAVCAR 119 (364)
T ss_pred HHHHHH----HHHHhCcChH-------HEEEeCCHHHHHHHHHHHhcC-----------CCCCeEEEcCCChHHHHHHHH
Confidence 445555 7777888764 588999989887766654322 44 678888888777777888
Q ss_pred HhCCCCCCeEEEeCCC-CCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH--hCCEEEeec
Q 041829 194 IGGIHPQNFRVLKTDS-STNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS--NGMWFHVDA 270 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~-~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~--~g~~lhvD~ 270 (486)
..|+ +++.+|++. ++++.+|++++.+++... .+.+|+++.++|+||.+-|.+++.++++. +++++++|+
T Consensus 120 ~~g~---~~~~v~~~~~~~~~~~d~~~l~~~~~~~-----~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~De 191 (364)
T PRK04781 120 LQNA---PLVEVPLVDGADGFHADVPAIVAAALAS-----NAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDE 191 (364)
T ss_pred HcCC---EEEEEecCCCccCCCcCHHHHHHHHhcc-----CCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeC
Confidence 8999 999999853 234678999986654321 24578888999999999998888888765 479999999
Q ss_pred cccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 271 AYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+|+.+.. .+.........+. =.+..++.|.++.| .-+|+++. +++.+....+....|-
T Consensus 192 ay~~f~~-~~~~~~~~~~~~~-vi~~~SfSK~~gl~GlRvGy~v~-~~~l~~~l~~~~~~~~------------------ 250 (364)
T PRK04781 192 AYGEFSD-VPSAVGLLARYDN-LAVLRTLSKAHALAAARIGSLIA-NAELIAVLRRCQAPYP------------------ 250 (364)
T ss_pred cchhhcC-CcchHHHHhhCCC-EEEEecChhhcccccceeeeeeC-CHHHHHHHHhccCCCC------------------
Confidence 9986542 1111111111111 14567789998744 55788765 3343332222211110
Q ss_pred CCCCCCCcHHHHHHHHHh--C-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHH
Q 041829 350 PLGRRFRSLKLWMVLRLY--G-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 350 ~~sr~~~~l~~~~~l~~~--g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
...+...++...+ | .+...+.+++..+.++.+.+.|++++++..+.++..+.+.+++.. ..
T Consensus 251 -----~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~p~~g~f~~~~~~~-----------~~ 314 (364)
T PRK04781 251 -----VPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALAQLPGVRRVYPSQGNFLLVRFDD-----------AE 314 (364)
T ss_pred -----CCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCCCCCeECCCCCcEEEEEcCC-----------HH
Confidence 0122222333333 2 244556667777888999999999888754446666666666531 14
Q ss_pred HHHHHHHccCcEEEEeeeEC-CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 427 KLLDDINSTGKIFISHTVLS-GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 427 ~l~~~l~~~g~~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
++.+.+.+.|..+..+..+. ...++|++++ +.++.++++++|+++.
T Consensus 315 ~~~~~l~~~gI~v~~~~~~~~~~~~~Ris~~----~~~~~~~l~~al~~~~ 361 (364)
T PRK04781 315 AAFQALLAAGVVVRDQRAAPRLSDALRITLG----TPEQNDRVLAALQRTQ 361 (364)
T ss_pred HHHHHHHHCCeEEeeCCCCCCCCCeEEEeCC----CHHHHHHHHHHHHHHH
Confidence 56777777885444433332 2468999993 6899999999998753
No 252
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.74 E-value=1.9e-17 Score=157.37 Aligned_cols=252 Identities=18% Similarity=0.163 Sum_probs=164.5
Q ss_pred cCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe
Q 041829 101 LNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA 180 (486)
Q Consensus 101 ~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~ 180 (486)
.|.....|...+...++|+. ++++||.+. .+|+.+||+||..++.+... +...|++
T Consensus 18 a~~gd~~Yg~D~~~~~l~~~----i~~l~g~e~---------a~f~~sGT~An~~al~~~~~-----------~~~~vi~ 73 (290)
T PF01212_consen 18 ANVGDDAYGEDPTTARLEER----IAELFGKEA---------ALFVPSGTMANQLALRAHLR-----------PGESVIC 73 (290)
T ss_dssp TTSB-CCTTSSHHHHHHHHH----HHHHHTSSE---------EEEESSHHHHHHHHHHHHHH-----------TTEEEEE
T ss_pred cccCCcccCCChhHHHHHHH----HHHHcCCCE---------EEEeCCCChHHHHHHHHHHh-----------cCCceec
Confidence 34444468899999999998 899999876 57999999999999988774 7788999
Q ss_pred cCCCchhHHHH---HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc-ccc---CChH
Q 041829 181 SDQTHSALQKA---CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS-TAV---DPLL 253 (486)
Q Consensus 181 s~~~H~s~~~a---~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t-G~i---d~l~ 253 (486)
...+|..+.+. ..+.|. +++.+|.+.+ +.+|+++|++.+++......+|.+|.++.+++.. |.+ +.|+
T Consensus 74 ~~~aHi~~~E~ga~~~~~G~---~~~~l~~~~~--G~l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ 148 (290)
T PF01212_consen 74 ADTAHIHFDETGAIEELSGA---KLIPLPSDDD--GKLTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELR 148 (290)
T ss_dssp ETTEHHHHSSTTHHHHHTTC---EEEEEBECTG--TBB-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHH
T ss_pred cccceeeeeccchhhHhcCc---EEEECCCccc--CCCCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHH
Confidence 99999877653 345788 8888887743 5999999999998854433456777777766553 655 5678
Q ss_pred HHHHHHHHhCCEEEeeccccchhcc--CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 254 ALGNIAKSNGMWFHVDAAYAGSACI--CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 254 ~I~~ia~~~g~~lhvD~A~g~~~~~--~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
+|.++||++|+.+|+|||--+.... ....+.. ...+|++++++.|.++.|. |.+++-+++.+.+.+.. ..++
T Consensus 149 ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~---~~~~D~v~~~~tK~~g~~~--Gavl~~~~~~i~~~~~~-~k~~ 222 (290)
T PF01212_consen 149 AISELAREHGLPLHMDGARLANAAAALGVSLAEI---AAGADSVSFGGTKNGGAPG--GAVLAGNKEFIAKARRQ-RKRL 222 (290)
T ss_dssp HHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHH---HTTSSEEEEETTSTT-SSS--EEEEEESHHHHHHHHHH-HHHH
T ss_pred HHHHHHHhCceEEEEehhhHHHhhhcccccHHHH---hhhCCEEEEEEEccccccc--ceEEEechHHHHHHHHH-HHHh
Confidence 8888999999999999985332221 1112222 2489999999999999884 44444454433332211 1111
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHH---HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCce
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKL---WMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFS 405 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~ 405 (486)
.... +....+.+ +......+.+.......+..++|++|.+.|+.+ ++.+..++..+
T Consensus 223 gg~~-----------------~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~~La~~l~~~-~~~~~~~~~tn 281 (290)
T PF01212_consen 223 GGGM-----------------RQAGVLAAAELYQFAALRALELWLERARHANAMAKRLAAGLEAL-GGVLPRPVETN 281 (290)
T ss_dssp THHH-----------------HHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHHCHHHCHHEE-CEEEETTSS-H
T ss_pred ccCe-----------------eecceeeeechhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHC-CCcccCCCCCc
Confidence 1100 00011111 111111122323567788889999999999998 56666555544
No 253
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.74 E-value=2.3e-15 Score=148.01 Aligned_cols=282 Identities=10% Similarity=0.038 Sum_probs=182.0
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...++.+. +++.+|.+.. ..++|+|+++++..++. +.. ++.+|+ .++++..+...+
T Consensus 41 ~~~~lr~~----ia~~~~~~~~-------~I~it~Gs~~~l~~~~~-~~~-----------~~~vv~-~~P~y~~y~~~~ 96 (332)
T PRK06425 41 SYTDIEDQ----IKIYTQGLKI-------KVLIGPGLTHFIYRLLS-YIN-----------VGNIII-VEPNFNEYKGYA 96 (332)
T ss_pred CHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHH-HhC-----------CCcEEE-eCCChHHHHHHH
Confidence 34555555 8899998875 58899999988776654 221 444444 478899999999
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEee
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD 269 (486)
+..|+ +++.||++. +.+|.+.+++ . ++.+|+++.++||||.+-+ +++|+++|+++|+|+++|
T Consensus 97 ~~~G~---~v~~vp~~~---~~~~~~~l~~----~-----~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~D 161 (332)
T PRK06425 97 FTHGI---RISALPFNL---INNNPEILNN----Y-----NFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFID 161 (332)
T ss_pred HHcCC---eEEEEeCCc---ccCcHHHHhh----c-----CCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEe
Confidence 99999 999999974 3566655542 1 2457788899999999865 677788889999999999
Q ss_pred ccccchhccCccchhcccCCcCC-C-ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEEA-D-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~a-D-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
.+|+-+.... ........... . .+..++.|.++.| .-+|+++... +.+........++.
T Consensus 162 E~Y~~~~~~~--~~~~~~~~~~~~~vi~~~SfSK~~~l~GlRiGy~v~~~-~li~~l~~~~~~~~--------------- 223 (332)
T PRK06425 162 EAFIDFVPNR--AEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDD-YNMKISRKITEPWS--------------- 223 (332)
T ss_pred cchhcccccc--chhHHHHhccCCCEEEEeecHHhcCCchhhheeeecCH-HHHHHHHHcCCCCc---------------
Confidence 9997654211 11111111111 2 3456789999854 4578877643 33332221111110
Q ss_pred CccCCCCCCCcHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYGLEN-LQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
. .... ...+.....+. +++..+...+.++++.+.|+++ ++++..++..+.+.+++. . .
T Consensus 224 --~------~~~~-~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~~~~~g~f~~~~~~-~----------~ 282 (332)
T PRK06425 224 --V------CDPA-IDFIRSIDLDYVAKHSLDIMENERSYLINNLEAM-GFRAAGDPSANFITFMIP-D----------A 282 (332)
T ss_pred --c------CHHH-HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHC-CCEECCCCCceEEEEEcC-C----------H
Confidence 0 1111 11222222222 3566777888889999999988 788765666677777653 1 1
Q ss_pred HHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.++.+.|.+.|.....+..+. +.+++|+++. +.++.++++++|+++.
T Consensus 283 ~~~~~~l~~~gi~v~~~~~f~~~~~~~iRis~~----~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 283 HDFYSYLLKNGILVRLLDDYECLGEQYIRIAIR----RRSFNIKLVNALRNFL 331 (332)
T ss_pred HHHHHHHHHCCeEEEECCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 467777777874444433332 2469999992 6789999999998763
No 254
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.74 E-value=2.8e-15 Score=148.15 Aligned_cols=321 Identities=13% Similarity=0.100 Sum_probs=196.9
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
..|..+|...+||++ +++++|.+. .+.|++||.|+..+...... ++++| +...|
T Consensus 72 d~Yagd~s~~~LE~~----vAe~lG~e~---------aV~v~sGTaAl~ll~~l~v~-----------pGd~V--p~n~~ 125 (460)
T PRK13237 72 EAYAGSRNFYHLEET----VQEYYGFKH---------VVPTHQGRGAENLLSRIAIK-----------PGQYV--PGNMY 125 (460)
T ss_pred hhhcCCCcHHHHHHH----HHHHHCCCe---------EEEeCCHHHHHHHHHHhCCC-----------CcCEE--CCccc
Confidence 468889999999999 889999875 79999999988764321111 45554 77778
Q ss_pred hhHHHH-HHHhCCCCCCeEEEeCC---------CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc-cc---CC
Q 041829 186 SALQKA-CQIGGIHPQNFRVLKTD---------SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST-AV---DP 251 (486)
Q Consensus 186 ~s~~~a-~~~~g~g~~~v~~v~~~---------~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG-~i---d~ 251 (486)
.+..++ ....|. ..+-++.+ +. +|.||+++|+++|++... ..+.+|.++...+..| .. ++
T Consensus 126 f~Tt~ahI~~~Ga---~fvDi~~d~a~~~~~~~p~-tgnlD~d~Le~~I~~~~~--~~~~lV~a~itvn~~GGqpvs~~~ 199 (460)
T PRK13237 126 FTTTRYHQELNGG---IFVDIIIDEAHDAQSDHPF-KGNVDLDKLQALIDEVGA--ENIAYICLAVTVNLAGGQPVSMAN 199 (460)
T ss_pred hHhhHHHHHhCCc---EEEeeecccccccccCCCC-CCCcCHHHHHHHhccccC--CccCceEEEEecccCCCeeCCHHh
Confidence 776666 555666 44433211 32 479999999999985422 1223455555566664 33 57
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhc-cC----ccchhc-----ccC-CcCCCceeeecccccCCCCcceEEEEeCchHH
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSAC-IC----PEYRQY-----IDG-VEEADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~-~~----~~~~~~-----~~~-~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
+++|.++|++||+.+|.|+|+..... +. +.+... ++. .+.+|.+++|+||.+.+|. .|++++++++.+
T Consensus 200 m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~-GG~i~t~D~eL~ 278 (460)
T PRK13237 200 MRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI-GGFLAMNDEELF 278 (460)
T ss_pred HHHHHHHHHHcCCEEEEECcchhcChhhhcccccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC-ceEEEECCHHHH
Confidence 89999999999999999999875422 22 112111 111 2479999999999999986 688889998766
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
.+.-.....|-.. ..+.--.+|...++ ...+...-. ...+++....+++|.+.|.+. |+.++.
T Consensus 279 ~~~r~~~~~~eG~-----------~tygg~~grd~~al--Avgl~E~~~---~~y~~~ri~~~~~l~~~L~~~-Gvpv~~ 341 (460)
T PRK13237 279 DEAKELVVVYEGM-----------PSYGGMAGRDMEAM--AIGIEESVQ---YEYIEHRVGQVRYLGEKLLAA-GVPIVE 341 (460)
T ss_pred HHHHHhccccCCC-----------cCCCChhhhHHHHH--HhHHHhhch---HHHHHHHHHHHHHHHHHHHHC-CCceec
Confidence 6543333222100 00000012222222 222332111 156677788899999999987 899887
Q ss_pred CCCceEEEEEecC--CCCCcccchHHHHHHHHHHHccCcE-EEEeeeE------C-------CEeEEEEEecCCCCCHHH
Q 041829 401 PRIFSLVCFRLLP--PHNDEDHGNKLNHKLLDDINSTGKI-FISHTVL------S-------GKYILRFAVGAPLTEWRH 464 (486)
Q Consensus 401 ~~~~~~v~f~~~~--~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~~------~-------~~~~lRi~~~~~~~t~~d 464 (486)
|.....|.+.... +..... ..-.+.|...|...+++ .+.-+.+ + .-..+|+++.-..-|.++
T Consensus 342 p~ggH~v~vda~~~lph~~~~--~~p~~al~~~ly~~~GiR~~e~g~~~~~~~~~~~~~~~~~~el~rlaiprr~yt~~h 419 (460)
T PRK13237 342 PVGGHAVFLDARRFLPHLPQD--QFPAQALAAELYIESGVRSMERGIVSAGRDPKTGENHYPKLELVRLTIPRRVYTYAH 419 (460)
T ss_pred CCCceEEEEEhHHhCCCCCcc--cChHHHHHHHHHHHhCcCeEeecceecccCCCCCccCCCccceeeeccccccccHHH
Confidence 6655555443221 000011 11124455555443322 2211111 0 125899998555668999
Q ss_pred HHHHHHHHHHHHHH
Q 041829 465 VNAAWEVMQDKASA 478 (486)
Q Consensus 465 i~~~~~~l~~~~~~ 478 (486)
+|.+.++|..+.++
T Consensus 420 ~~~v~~~~~~~~~~ 433 (460)
T PRK13237 420 MDVVADSVIKLYKH 433 (460)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999988764
No 255
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.74 E-value=2.1e-15 Score=152.42 Aligned_cols=327 Identities=12% Similarity=0.062 Sum_probs=201.9
Q ss_pred HHHHHHHHHHhcC-cCccccccChhhHHHHHHHHHHHHHHcCC--CCCCcCCCCCCeE--EcCchhHHHHHHHHHHHHHH
Q 041829 90 AGFLGEMLSAGLN-IVGFSWITSPAATELEMIVLDWLAKLLKL--PEDFLSSGQGGGV--IQGTASEAVLVVLLAARDKA 164 (486)
Q Consensus 90 ~~~~~~~l~~~~n-~~~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~~--~t~ggt~a~~~al~~a~~~~ 164 (486)
...+.+.+..... .....|....+..++.+++.+|+.+..+. +++ +.+ .|.||+.|...++.+.+..
T Consensus 49 ~~~~~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~v~~~~t~G~~~al~~~~~~l~~~- 120 (404)
T PTZ00376 49 LESVRKAEKIIAEKNLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEK-------RIATVQALSGTGALRLGFEFLKRF- 120 (404)
T ss_pred hhHHHHHHHHhccccCCCCCCCCCCCHHHHHHHHHHhcCCCccccccC-------eEEEeeccCcchHHHHHHHHHHHh-
Confidence 3444454433332 22356766778899999988888655432 222 344 3888888876665433211
Q ss_pred HHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 165 LKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 165 ~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
.. +++.|++.+.+++.+...++.+|+ +++.+|+.+++++.+|++.+++++++... +..+++.+.++|
T Consensus 121 ~~-------~Gd~Vlv~~P~y~~~~~~~~~~G~---~~~~v~l~~~~~~~~d~~~l~~~~~~~~~---~~~~~~~~~p~N 187 (404)
T PTZ00376 121 LP-------AGTTVYVSNPTWPNHVNIFKSAGL---NVKEYRYYDPKTKGLDFDGMLEDLRTAPN---GSVVLLHACAHN 187 (404)
T ss_pred cC-------CCCEEEEcCCCchhHHHHHHHcCC---ceeeccccCcccCCcCHHHHHHHHHhCCC---CCEEEEeCCCCC
Confidence 11 678899999999999999999999 99999985433579999999999865311 135677789999
Q ss_pred ccccc---CChHHHHHHHHHhCCEEEeeccccchhccCc--cchhcccCC-cCC-C-ceeeecccccCCC-CcceEEE--
Q 041829 245 SSTAV---DPLLALGNIAKSNGMWFHVDAAYAGSACICP--EYRQYIDGV-EEA-D-SFNMNAHKWFLTN-FDCSALW-- 313 (486)
Q Consensus 245 ~tG~i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~--~~~~~~~~~-~~a-D-s~~~~~hK~l~~p-~~~g~l~-- 313 (486)
|||.+ +.+++|+++|++||+|+++|.+|..+..... .... +..+ +.. . .+..++.|.++.| .-+|+++
T Consensus 188 PTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~-~~~~~~~~~~vi~i~SfSK~~~~~GlRvG~~~~~ 266 (404)
T PTZ00376 188 PTGVDPTEEQWKEIADVMKRKNLIPFFDMAYQGFASGDLDKDAYA-IRLFAERGVEFLVAQSFSKNMGLYGERIGALHIV 266 (404)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCcEEEEehhhcCccCCCHHHHHHH-HHHHHhcCCcEEEEEeCCCcccccccccceEEEE
Confidence 99999 4577888999999999999999976543210 1111 1111 111 2 4456789999854 6688875
Q ss_pred EeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh--------hhHHHHHHHHHHHHHH
Q 041829 314 VKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL--------ENLQGYIRNHIQLAKH 385 (486)
Q Consensus 314 ~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~ 385 (486)
+.+++...........+... ...+ ...+..+++...+.. +.+++..++..++++.
T Consensus 267 ~~~~~~~~~l~~~~~~~~~~--------------~~~~---~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~ 329 (404)
T PTZ00376 267 CANKEEAANVLSQLKLIIRP--------------MYSS---PPIHGARIADRILSDPELRAEWLSELKEMSGRIQNMRQL 329 (404)
T ss_pred eCCHHHHHHHHHHHHHHHhh--------------hcCC---CchHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45554222111100000000 0000 012233333333321 1244555677788888
Q ss_pred HHHHHhcCC---CeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCH
Q 041829 386 FEGLVAQDL---RFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEW 462 (486)
Q Consensus 386 l~~~l~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~ 462 (486)
+.+.|++.. +++.. +|..+++.|--.+ .++.++|.++.++++.+. + |+++++ .++
T Consensus 330 l~~~L~~~~~~~~~~~~-~p~gg~f~~~~~~------------~~~~~~L~~~~~v~v~p~---~----Ris~~~--~~~ 387 (404)
T PTZ00376 330 LYDELKALGSPGDWEHI-INQIGMFSFTGLT------------KEQVERLIEKYHIYLLDN---G----RISVAG--LTS 387 (404)
T ss_pred HHHHHHhcCCCCccccc-ccCceEEEecCCC------------HHHHHHHHHhCCEeecCC---C----eEEEec--cCH
Confidence 999998862 23333 4555554442111 356667777744665543 1 999932 689
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKAS 477 (486)
Q Consensus 463 ~di~~~~~~l~~~~~ 477 (486)
++++.++++|+++.+
T Consensus 388 ~~~~~~~~~l~~~~~ 402 (404)
T PTZ00376 388 KNVDYVAEAIHDVVR 402 (404)
T ss_pred HhHHHHHHHHHHHHh
Confidence 999999999998764
No 256
>PRK07505 hypothetical protein; Provisional
Probab=99.74 E-value=5.1e-15 Score=149.50 Aligned_cols=299 Identities=12% Similarity=0.070 Sum_probs=173.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+...++.+.+++++|. . .+++++|++|+..++..++....+ +.++.+|+.+...|.|+.....
T Consensus 89 ~~~~~~~l~~~la~~~~~-~---------~~~~~sG~~a~~~ai~~~~~~~~~-----~~~~~vi~~~~~~H~s~~~~~~ 153 (402)
T PRK07505 89 RSQILKDLEEALSELFGA-S---------VLTFTSCSAAHLGILPLLASGHLT-----GGVPPHMVFDKNAHASLNILKG 153 (402)
T ss_pred hhHHHHHHHHHHHHHhCC-C---------EEEECChHHHHHHHHHHHHhcccC-----CCCCCEEEEchhhhHhHHhhhh
Confidence 345556666679999986 3 466667788998888765532111 1134466777788998754222
Q ss_pred H--hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 194 I--GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 194 ~--~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
. .+. +++.+|. .|+++|++++++. +.+++++.|.+++|.+.|+++|.++|+++|+++++|++
T Consensus 154 ~~~~~~---~v~~~~~-------~d~~~l~~~~~~~------~~~~vl~~p~~~~G~~~~~~~i~~l~~~~~~~li~DEa 217 (402)
T PRK07505 154 ICADET---EVETIDH-------NDLDALEDICKTN------KTVAYVADGVYSMGGIAPVKELLRLQEKYGLFLYIDDA 217 (402)
T ss_pred hhhcCC---eEEEeCC-------CCHHHHHHHHhcC------CCEEEEEecccccCCcCCHHHHHHHHHHcCCEEEEECc
Confidence 2 233 6777764 3889999888543 23677788899999999999999999999999999999
Q ss_pred ccchhc--cCccchhcccCC--cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCCC
Q 041829 272 YAGSAC--ICPEYRQYIDGV--EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 272 ~g~~~~--~~~~~~~~~~~~--~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~ 346 (486)
|+...+ ....+.....+. .....++.++-|.++.+ .|++++.++.... .+.. ..+|.+
T Consensus 218 ~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~--Gg~~~~~~~~~~~-~~~~~~~~~t~-------------- 280 (402)
T PRK07505 218 HGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS--GGVIMLGDAEQIE-LILRYAGPLAF-------------- 280 (402)
T ss_pred ccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc--CeEEEeCCHHHHH-HHHHhCCCcee--------------
Confidence 853111 111111001111 12234455788988755 3666555544332 2221 222211
Q ss_pred CccCCCCC-CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRR-FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~-~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
..+.. +....+.+++..+..+.+.++.++..++.+.+.+.+... .....+.+..+.+.. ....
T Consensus 281 ---~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-----~~g~~~~i~~~~~~~--------~~~~ 344 (402)
T PRK07505 281 ---SQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPTE-----QSGSFLPIRLIYIGD--------EDTA 344 (402)
T ss_pred ---CCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHhc-----CCCCCCCEEEEEeCC--------HHHH
Confidence 11111 122233444544445555555555544444443332211 111222222222211 1234
Q ss_pred HHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.++.++|.++|.+ +.+..+ .+..++|+++ ....|++|+++++++|+++..+
T Consensus 345 ~~~~~~l~~~Gi~-v~~~~~p~~~~~~~~lRi~~-~~~~t~eei~~~~~~l~~~l~~ 399 (402)
T PRK07505 345 IKAAKQLLDRGFY-TSPVFFPVVAKGRAGLRIMF-RASHTNDEIKRLCSLLKEILDE 399 (402)
T ss_pred HHHHHHHHHCCCe-EeeecCCCCCCCCceEEEec-CccCCHHHHHHHHHHHHHHHHh
Confidence 6788888888854 443321 2335899999 7788999999999999988654
No 257
>PRK03321 putative aminotransferase; Provisional
Probab=99.73 E-value=1.1e-15 Score=151.64 Aligned_cols=287 Identities=12% Similarity=0.069 Sum_probs=183.1
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
++..++++. +++++|.+++ ..++++|+++++..++.+... +++.|+++...+......
T Consensus 57 ~g~~~lr~~----ia~~~~~~~~-------~I~~~~G~~~~l~~~~~~~~~-----------~gd~Vli~~p~y~~~~~~ 114 (352)
T PRK03321 57 MGAVELRAA----LAEHLGVPPE-------HVAVGCGSVALCQQLVQATAG-----------PGDEVIFAWRSFEAYPIL 114 (352)
T ss_pred CcHHHHHHH----HHHHhCcCHH-------HEEECCCHHHHHHHHHHHhcC-----------CCCEEEeCCCCHHHHHHH
Confidence 455566666 7777787654 478888777766555443221 677788887777777778
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH--hCCEEEee
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS--NGMWFHVD 269 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~--~g~~lhvD 269 (486)
++..|. +++.+|.+++ +.+|++++++++++. +.+|+++.++|+||.+-|.++|.++|+. +++++++|
T Consensus 115 ~~~~g~---~~~~v~~~~~--~~~~~~~l~~~~~~~------~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~D 183 (352)
T PRK03321 115 VQVAGA---TPVQVPLTPD--HTHDLDAMAAAITDR------TRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLD 183 (352)
T ss_pred HHHcCC---EEEEccCCCC--CCCCHHHHHHhhccC------CCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEe
Confidence 888999 9999998753 589999999988643 3467788999999999999999999987 59999999
Q ss_pred ccccchhccCccchhcccCCcC-CCc-eeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEE-ADS-FNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~-aDs-~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
++|+.+.... .....+..+.. -+. ++.++.|.++.| ..+|+++.. +............+
T Consensus 184 e~y~~~~~~~-~~~~~~~~~~~~~~vi~~~S~SK~~g~~GlRiG~~v~~-~~~~~~~~~~~~~~---------------- 245 (352)
T PRK03321 184 EAYVEYVRDD-DVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGH-PEVIAALRKVAVPF---------------- 245 (352)
T ss_pred chHHHhccCc-CCCcHHHHHhhCCCEEEEecchHHhhhHHHhhhhhcCC-HHHHHHHHHhcCCC----------------
Confidence 9998654321 11111111111 233 344678988744 347777764 33332221111000
Q ss_pred CccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
....+...++...+ ..+.+.+.+++..+..+.+.+.|++. ++.+. ++..+.+.+++.. + .
T Consensus 246 -------~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~-~~~~~-~~~g~~i~i~l~~--------~--~ 306 (352)
T PRK03321 246 -------SVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA-GWTVP-PSQANFVWLPLGE--------R--T 306 (352)
T ss_pred -------CCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC-CCccC-CCCCCEEEEeCCC--------C--H
Confidence 11222333333332 23344555566666677788888886 67653 3444555555421 1 2
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.++.+.|.+.| +.+.+ +. ..++|+++ .+.++.++++++|+++.
T Consensus 307 ~~~~~~l~~~g-I~v~~--~~-~~~iRi~~----~~~~~~~~~~~al~~~~ 349 (352)
T PRK03321 307 ADFAAAAAEAG-VVVRP--FA-GEGVRVTI----GAPEENDAFLRAARAWR 349 (352)
T ss_pred HHHHHHHHHCC-EEEEc--cC-CCcEEEee----CCHHHHHHHHHHHHHHh
Confidence 46777777777 44544 32 34699998 37899999999998764
No 258
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=99.73 E-value=2e-15 Score=149.21 Aligned_cols=287 Identities=20% Similarity=0.257 Sum_probs=191.5
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++-|... ++++++|..|+..++.+... +++.|+++...+....
T Consensus 53 gnPt~~~le~~----la~Le~g~~---------a~~~~SGmaAi~~~l~~ll~-----------~Gd~iv~~~~~Y~~t~ 108 (386)
T PF01053_consen 53 GNPTVRALEQR----LAALEGGED---------ALLFSSGMAAISAALLALLK-----------PGDHIVASDDLYGGTY 108 (386)
T ss_dssp C-HHHHHHHHH----HHHHHT-SE---------EEEESSHHHHHHHHHHHHS------------TTBEEEEESSSSHHHH
T ss_pred ccccHHHHHHH----HHHhhcccc---------eeeccchHHHHHHHHHhhcc-----------cCCceEecCCccCcch
Confidence 56888888888 899988643 78888888887777665433 6778888888876665
Q ss_pred HHHH----HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC-C
Q 041829 190 KACQ----IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG-M 264 (486)
Q Consensus 190 ~a~~----~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g-~ 264 (486)
+.++ ..|+ ++..++. -|+++|++++++.+ .+|.+..++|++..+-||++|+++||++| +
T Consensus 109 ~~~~~~l~~~gv---~v~~~d~-------~d~~~l~~~l~~~t------~~v~~EspsNP~l~v~Dl~~i~~~a~~~g~~ 172 (386)
T PF01053_consen 109 RLLEELLPRFGV---EVTFVDP-------TDLEALEAALRPNT------KLVFLESPSNPTLEVPDLEAIAKLAKEHGDI 172 (386)
T ss_dssp HHHHHCHHHTTS---EEEEEST-------TSHHHHHHHHCTTE------EEEEEESSBTTTTB---HHHHHHHHHHTTT-
T ss_pred hhhhhhhcccCc---EEEEeCc-------hhHHHHHhhccccc------eEEEEEcCCCcccccccHHHHHHHHHHhCCc
Confidence 5444 4688 7777753 38999999998754 58999999999999999999999999999 9
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
+++||.+++.....-| +.. +||.+..+.-|++++... .|++++++...+...+.....
T Consensus 173 ~~vVDnT~atp~~~~p-L~~------GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~------------- 232 (386)
T PF01053_consen 173 LVVVDNTFATPYNQNP-LEL------GADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRR------------- 232 (386)
T ss_dssp EEEEECTTTHTTTC-G-GGG------T-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHH-------------
T ss_pred eEEeeccccceeeecc-CcC------CceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhh-------------
Confidence 9999999988754432 221 799999999999986543 677777773333222211000
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-C----------------CCce
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-P----------------RIFS 405 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~----------------~~~~ 405 (486)
..|....+..+|..++ |...+..++++..++|..+.+.|+++|.++-+. | ...+
T Consensus 233 -------~~G~~~~p~da~ll~r--gl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~gg 303 (386)
T PF01053_consen 233 -------LLGATLSPFDAWLLLR--GLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGG 303 (386)
T ss_dssp -------HHT-B--HHHHHHHHH--HHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTS
T ss_pred -------hcCccchHHHHHHHhc--CCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCc
Confidence 1222334567777776 678889999999999999999999999997442 2 1236
Q ss_pred EEEEEecCCCCCcccchHHHHHHHHHHHcc------Cc---EEEEeeeE------------CC--EeEEEEEecCCCCCH
Q 041829 406 LVCFRLLPPHNDEDHGNKLNHKLLDDINST------GK---IFISHTVL------------SG--KYILRFAVGAPLTEW 462 (486)
Q Consensus 406 ~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~---~~~~~~~~------------~~--~~~lRi~~~~~~~t~ 462 (486)
+++|.+.. ..+...++.+.|.-- |. ....+... .| ...+|+|+ --
T Consensus 304 l~sf~l~~-------~~~~~~~f~~~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSv-----Gl 371 (386)
T PF01053_consen 304 LLSFELKG-------GEEAARRFLDALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSV-----GL 371 (386)
T ss_dssp EEEEEESS-------HHHHHHHHHHH-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE-------S
T ss_pred eeEEEecc-------chhhhHhHHhhhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEe-----cc
Confidence 99999875 123456677776421 11 11111110 01 25899999 24
Q ss_pred HHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKAS 477 (486)
Q Consensus 463 ~di~~~~~~l~~~~~ 477 (486)
||++.+++.|++..+
T Consensus 372 Ed~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 372 EDPDDLIADLEQALE 386 (386)
T ss_dssp S-HHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhcC
Confidence 678888888877653
No 259
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.73 E-value=9.8e-15 Score=146.93 Aligned_cols=335 Identities=15% Similarity=0.087 Sum_probs=195.3
Q ss_pred CcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHH
Q 041829 77 PNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVV 156 (486)
Q Consensus 77 p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~a 156 (486)
..++|| +.|.....+.+.+...... +..+ ..+...+++++ |+++++.+ ..+|++|||+||..|
T Consensus 46 ~~~lGh--~~p~v~~a~~~~~~~~~~~-~~~~-~~~~~~~la~~----L~~~~~~~---------~~~f~~SGseA~e~A 108 (397)
T TIGR03246 46 VNALGH--AHPELVKALIEQADKLWHI-GNGY-TNEPVLRLAKK----LVDATFAD---------KVFFCNSGAEANEAA 108 (397)
T ss_pred hccCCC--CCHHHHHHHHHHHHhcccc-cCcc-CCHHHHHHHHH----HHhhCCCC---------EEEEeCCcHHHHHHH
Confidence 457777 2444455555555432211 1111 23333445554 78877643 379999999999999
Q ss_pred HHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCC---------CCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 157 LLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHP---------QNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 157 l~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
+..+|.....+.+ . .+..+|......|-+..-+....+... ..+..+|. -|+++|++++.+.
T Consensus 109 lk~ar~~~~~~~~-~-~r~~ii~~~~~yHG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~ 179 (397)
T TIGR03246 109 LKLARRYALDKHG-A-DKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPY-------NDLAAAKALISDK 179 (397)
T ss_pred HHHHHHHHHhcCC-C-CCCEEEEECCCcCCccHHHHHhcCCcccccCCCCCCCceEEeCC-------CCHHHHHHHhccC
Confidence 9999875321100 0 133455556667877665555443210 12223332 2889999988542
Q ss_pred HhCCCccEEEEEecCCcccccc----CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeeccccc
Q 041829 228 LTIGLIPFFLCATVGTTSSTAV----DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWF 303 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l 303 (486)
+.+|++....++.|.+ +.+++|.++|++||+++++|++|.|+.....-+.....++ ..|++++ -|.+
T Consensus 180 ------~aavi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv-~pDi~t~--~K~l 250 (397)
T TIGR03246 180 ------TCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGV-TPDILTS--AKAL 250 (397)
T ss_pred ------eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCC-CCCEEEe--ehhh
Confidence 4577777666667755 4499999999999999999999865422111111111123 4687765 5888
Q ss_pred CCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHH
Q 041829 304 LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLA 383 (486)
Q Consensus 304 ~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a 383 (486)
+..+..|+++.++. +.+.+.... . ..+. .+.+.....+.++++.+.. .++.++..++.
T Consensus 251 ggG~pigav~~~~~--i~~~~~~~~----~------------~~t~-~~~p~~~aaa~a~l~~~~~---~~l~~~~~~~~ 308 (397)
T TIGR03246 251 GGGFPIGAMLTTTE--IAAHLKVGT----H------------GTTY-GGNPLACAVAGKVLDLVNT---PELLAGVKQRH 308 (397)
T ss_pred hCCcceeEEEEcHH--HHHhccCCC----c------------CCCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHH
Confidence 65566888877643 333332110 0 0011 1122223344455554432 35677888889
Q ss_pred HHHHHHHhcCCC-eEEec--CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCC
Q 041829 384 KHFEGLVAQDLR-FEVVT--PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLT 460 (486)
Q Consensus 384 ~~l~~~l~~~~~-~~~~~--~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 460 (486)
++|.+.|+++.. +.++. .....++.+.+.+. .......+...|.++|.+. .+. +..++|++. +...
T Consensus 309 ~~l~~~L~~l~~~~~~~~~vrg~G~~~~i~~~~~------~~~~~~~~~~~l~~~Gv~~-~~~---g~~~lR~~p-~~~~ 377 (397)
T TIGR03246 309 DLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEA------YQGKAKQFVNAAAEEGVIA-LIA---GPNVVRFAP-SLVI 377 (397)
T ss_pred HHHHHHHHHHHhcCCCeEeeecCceEEEEEEcCc------hhhHHHHHHHHHHHCCeEE-eec---CCCEEEEeC-CCCC
Confidence 999998877521 21221 22233444444321 1234467888888888554 321 335899988 7788
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~l 479 (486)
|++||++++++|.++.+++
T Consensus 378 t~~~i~~~~~~l~~~l~~~ 396 (397)
T TIGR03246 378 SDDDIDEGLARFERAIEQV 396 (397)
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999887653
No 260
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.73 E-value=3.9e-15 Score=139.49 Aligned_cols=302 Identities=17% Similarity=0.154 Sum_probs=208.4
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
.+.-...||++ |++|.+-+.. ++.++.-.||=..|-..-... ++.+||.++..|.|..
T Consensus 214 ~s~~hv~LE~e----LA~LHqK~aA---------LlFsSCfVANDstLftLak~l---------pgcei~SD~gNHASMI 271 (570)
T KOG1360|consen 214 HSKHHVRLEAE----LADLHQKEAA---------LLFSSCFVANDSTLFTLAKKL---------PGCEIFSDEGNHASMI 271 (570)
T ss_pred CCchhhhHHHH----HHHHhcCcce---------eeeeeeeeccchHHHHHHHHC---------CCcEEeccccchHHHH
Confidence 34456678887 9999986653 444444444444443322222 8889998888899999
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
...+..++ .-.... +-|+++|++++++..+ ..|.+|......++.|++.||+||++++++||+...+|
T Consensus 272 ~GIrns~v---~K~IFr-------HND~~hL~~lL~~~~~--svPKivAFEtVhSM~GavcpleelcDvah~yGAiTFlD 339 (570)
T KOG1360|consen 272 QGIRNSRV---PKHIFR-------HNDLDHLEQLLQSSPK--SVPKIVAFETVHSMDGAVCPLEELCDVAHKYGAITFLD 339 (570)
T ss_pred HHhhhcCC---cceeec-------cCCHHHHHHHHHhCCC--CCCceEEEeeeeccCCCcCCHHHHHHHHHHhCceeeee
Confidence 99888887 433333 4599999999987543 46899999999999999999999999999999999999
Q ss_pred ccccchhccCccchhc--ccC-CcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCC
Q 041829 270 AAYAGSACICPEYRQY--IDG-VEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~--~~~-~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~ 345 (486)
+.|+.+.+ .+..... -.| +.++|.|+...-|.++.- .|.+.. . ..+.+.++. .+++++...-
T Consensus 340 EVHAVGlY-G~rGaGvgerdGvm~kvDiIsGTLgKafGcV--GGYIAa-t-~~LvDmiRSyAaGFIFTTSL--------- 405 (570)
T KOG1360|consen 340 EVHAVGLY-GPRGAGVGERDGVMHKVDIISGTLGKAFGCV--GGYIAA-T-RKLVDMIRSYAAGFIFTTSL--------- 405 (570)
T ss_pred hhhhhccc-cCCCCCccccCCcchhhhhcccchhhhcccc--cceehh-h-hhHHHHHHHhcCceEEecCC---------
Confidence 98875543 2221110 012 458999999998887653 233332 2 234444433 4566654321
Q ss_pred CCccCCCCCCCc-HHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchH
Q 041829 346 DWQIPLGRRFRS-LKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 346 ~~~~~~sr~~~~-l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 423 (486)
+... ..+..+.+.+ +.|| +.+.+..+++.+++++.|.+. |+-++.. ...+|.+++.. ..
T Consensus 406 --------PP~vl~GAleaVr~lk~~eg-~~lR~~hqrnv~~~kq~l~~~-GiPVi~~-pSHIiPv~vgd--------a~ 466 (570)
T KOG1360|consen 406 --------PPMVLAGALEAVRILKSEEG-RVLRRQHQRNVKYVKQLLMEL-GIPVIPN-PSHIIPVRVGD--------AA 466 (570)
T ss_pred --------ChHHHHhHHHHHHHHhhhhh-HHHHHHHHHHHHHHHHHHHHc-CCcccCC-CcceeeeeccC--------HH
Confidence 1111 1223333333 3455 445566778899999999987 8887744 45688888753 45
Q ss_pred HHHHHHHHHHccCcEEEE----eeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINSTGKIFIS----HTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 424 ~~~~l~~~l~~~g~~~~~----~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
++.++.+.|+.+..+++- |+...|...+||+. +|..|.+-++.++++|..+..++
T Consensus 467 l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaP-TP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360|consen 467 LAKQASDILISKHNIYVQAINYPTVARGTERLRIAP-TPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred HHHHHHHHHHHhcCeEEEeccCCcccccceeeecCC-CCCCCHHHHHHHHHHHHHHHHHc
Confidence 678888888888778775 34557888999999 89999999999999999887763
No 261
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.72 E-value=2e-14 Score=145.32 Aligned_cols=313 Identities=13% Similarity=0.072 Sum_probs=179.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG 196 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g 196 (486)
....+.+.+++++|.+. .++++|||+||..|+..++.....+.+....+..+|......|-+....+...+
T Consensus 74 ~~~~~~~~l~~~~~~~~---------~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~ 144 (400)
T PTZ00125 74 VLGLAEKYITDLFGYDK---------VLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSAST 144 (400)
T ss_pred HHHHHHHHHHhCCCCCE---------EEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcC
Confidence 33444444777777643 789999999999999988754222111000134456666666777666655443
Q ss_pred CCCCCeEEEeCCCCC--CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeec
Q 041829 197 IHPQNFRVLKTDSST--NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 197 ~g~~~v~~v~~~~~~--~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~ 270 (486)
-........|..++- -...|+++|++.++. ..+.+|+++...+++|.+-| +++|.++|++||+++++|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~-----~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~De 219 (400)
T PTZ00125 145 DPKCYNNFGPFVPGFELVDYNDVEALEKLLQD-----PNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDE 219 (400)
T ss_pred CcchhccCCCCCCCceEeCCCCHHHHHHHhCC-----CCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 210000000110000 002389999998851 13567888888899999877 9999999999999999999
Q ss_pred cccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCcc
Q 041829 271 AYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
+|.++......+.....++ ..|.++++ |+++.++ ++|+++.+++ +.+.+.... .. . +.
T Consensus 220 v~~g~g~~G~~~~~~~~~~-~pd~~~~s--K~l~~g~~~ig~v~~~~~--~~~~~~~~~--~~------------~--t~ 278 (400)
T PTZ00125 220 IQTGLGRTGKLLAHDHEGV-KPDIVLLG--KALSGGLYPISAVLANDD--VMLVIKPGE--HG------------S--TY 278 (400)
T ss_pred cccCCCccchhhHHHhcCC-CCCEEEEc--ccccCCCcCcEEEEEcHH--HHhhccCCC--CC------------C--CC
Confidence 9875321111011111122 35777765 9998765 7888887653 222221100 00 0 00
Q ss_pred CCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 350 PLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD----LRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 350 ~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
.+.+.....+..+++.+..+++ .++..++.+++++.|+++ +.+..+ .+...++.+.+.... ....
T Consensus 279 -~~~~~~~~aa~~~l~~i~~~~~---~~~~~~~~~~l~~~l~~l~~~~~~~~~~-~~~g~~~~v~~~~~~------~~~~ 347 (400)
T PTZ00125 279 -GGNPLACAVAVEALEVLKEEKL---AENAQRLGEVFRDGLKELLKKSPWVKEI-RGKGLLNAIVFDHSD------GVNA 347 (400)
T ss_pred -CcCHHHHHHHHHHHHHHHhcCH---HHHHHHHHHHHHHHHHHHHhcCCCeEEE-ecccEEEEEEEccCc------chHH
Confidence 1111222233334444433333 344455667777776553 322222 233345555554211 1223
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
..+.+.|.++| +++.+. +..++|++. +...++++|++++++|.++++++.
T Consensus 348 ~~~~~~l~~~G-v~v~~~---~~~~lRi~~-~~~~~~~~i~~~l~~l~~~l~~~~ 397 (400)
T PTZ00125 348 WDLCLKLKENG-LLAKPT---HDNIIRFAP-PLVITKEQLDQALEIIKKVLKSFD 397 (400)
T ss_pred HHHHHHHHHCC-eEEeec---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 56778888787 455442 345899998 667899999999999999887663
No 262
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.72 E-value=5.6e-15 Score=147.37 Aligned_cols=309 Identities=12% Similarity=0.055 Sum_probs=186.7
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
..+.+.+....+. ..|....+..++.+.+.+|+.+.+|.+ .+ ....++|+|+++++..++.+....
T Consensus 43 ~~~~~~~~~~~~~--~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~------ 109 (364)
T PRK07865 43 PVIQEALAAAADA--PGYPTTAGTPELREAIVGWLARRRGVTGLD-----PAAVLPVIGSKELVAWLPTLLGLG------ 109 (364)
T ss_pred HHHHHHHHHHHhh--CCCCCccCCHHHHHHHHHHHHHHcCCCCCC-----cccEEEccChHHHHHHHHHHHcCC------
Confidence 3444445443322 246555677899999999999988764 22 126889999888876644433111
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..+|..+..+++.+|+ +++.++. +++++. ..+.+|+++.++|+||.+
T Consensus 110 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~~~~---------~~~l~~---------~~~~~v~~~~p~NPtG~~ 164 (364)
T PRK07865 110 ----PGDVVVIPELAYPTYEVGARLAGA---TVVRADS---------LTELGP---------QRPALIWLNSPSNPTGRV 164 (364)
T ss_pred ----CCCEEEECCCCcccHHHHHHhcCC---EEEecCC---------hhhCCc---------ccceEEEEcCCCCCCCcc
Confidence 677899999999999999999999 7776642 222221 124578888899999988
Q ss_pred C---ChHHHHHHHHHhCCEEEeeccccchhccCccchhc---ccCCc-CCCceeeecccccCCC-CcceEEEEeCchHHH
Q 041829 250 D---PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY---IDGVE-EADSFNMNAHKWFLTN-FDCSALWVKDRNTLI 321 (486)
Q Consensus 250 d---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~---~~~~~-~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~ 321 (486)
- .+++|.++|+++|+++++|.+|+.+....+..... ..+.. .-..++.++.|.++.| ..+|+++. +++.+.
T Consensus 165 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~GlRiG~i~~-~~~~~~ 243 (364)
T PRK07865 165 LGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAG-DPALVA 243 (364)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCccccccccCCccceEEEEeechhccCCCceeeEEEec-CHHHHH
Confidence 4 46788999999999999999998643211111000 00100 1126677899998655 34677654 444333
Q ss_pred HHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 322 QSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 322 ~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
. +.....+.. . ....+...++...+. .+.+++..+...++++.+.+.|++. ++.+.
T Consensus 244 ~-~~~~~~~~~------------------~--~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~-g~~~~- 300 (364)
T PRK07865 244 E-LLEVRKHAG------------------M--MVPAPVQAAMVAALGDDAHVREQRERYARRRAVLRPALEAA-GFRVD- 300 (364)
T ss_pred H-HHHHHHhcC------------------C--CcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCccc-
Confidence 2 211100000 0 001122222223332 2445666777788888999999886 77754
Q ss_pred CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC--CEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 401 PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS--GKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 401 ~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.|..+++.+.-.+. + ...+.+.|.+.|..+..+..+. +..++|+++ +. +++++++.+++|+
T Consensus 301 ~~~~~~~~~~~~~~-------~--~~~~~~~l~~~gv~v~pg~~f~~~~~~~iRi~~-~~--~~~~~~~~~~~l~ 363 (364)
T PRK07865 301 HSEAGLYLWATRGE-------D--CWDTVAWLAERGILVAPGDFYGPAGAQHVRVAL-TA--TDERIAAAVERLA 363 (364)
T ss_pred CCCccEEEEEeCCC-------C--HHHHHHHHHHCCEEEeCccccCcCCCCEEEEEe-cC--CHHHHHHHHHHhh
Confidence 34445433221121 1 1345666777775444433232 346999999 33 5899999998874
No 263
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.72 E-value=8.2e-15 Score=147.10 Aligned_cols=298 Identities=14% Similarity=0.086 Sum_probs=169.1
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC-chhHHHHHHHh
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT-HSALQKACQIG 195 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~a~~~~ 195 (486)
...++.+++++++|.+. .++++||++++..++.+++..... .+.+++.|++.... |.+...+. ..
T Consensus 70 ~~~~l~~~la~~~g~~~---------~~~~~sg~~a~~~a~~~~~~~~~~----~~~~~~~vi~~~~~yh~~~~~~~-~~ 135 (379)
T TIGR00707 70 PQEELAEKLVEHSGADR---------VFFCNSGAEANEAALKLARKYTGD----KGKEKKKIIAFENSFHGRTMGAL-SA 135 (379)
T ss_pred HHHHHHHHHHhhCCCCE---------EEEeCCcHHHHHHHHHHHHHHhhc----cCCCCCeEEEECCCcCCccHHHH-Hh
Confidence 34444455899998763 799999999999999877642110 00123455555444 43333322 22
Q ss_pred CCCC-CCeEEEeCCCCCCCc--cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC----ChHHHHHHHHHhCCEEEe
Q 041829 196 GIHP-QNFRVLKTDSSTNYS--LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD----PLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 196 g~g~-~~v~~v~~~~~~~~~--id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id----~l~~I~~ia~~~g~~lhv 268 (486)
+... ......++..+-.+. .|+++|++++.+. +.+|+++..++++|.+. ++++|.++|+++|+++++
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~v~~~p~~~~~g~~~~~~~~l~~i~~l~~~~~~~~i~ 209 (379)
T TIGR00707 136 TGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDE------TAAVIVEPIQGEGGVNPASAEFLKALREICKDKDALLIF 209 (379)
T ss_pred cCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhC------eeEEEEEccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 2200 000112222211111 1899999988653 34677777777777642 489999999999999999
Q ss_pred eccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCc
Q 041829 269 DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQ 348 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (486)
|++|.++............++ ..|.++ ..|.++.+..+|+++... +.. +.+...... . .
T Consensus 210 De~~~~~~~~g~~~~~~~~~~-~~d~~t--~sK~~~~G~riG~~~~~~-~~~-~~~~~~~~~--------------~--~ 268 (379)
T TIGR00707 210 DEVQTGIGRTGKFFAYEHYGI-EPDIIT--LAKGLGGGVPIGATLAKE-EVA-EAFTPGDHG--------------S--T 268 (379)
T ss_pred eccccCCCccchhhhHHhcCC-CCCEEE--EcccccCCcccEEEEEcH-HHH-hhhcCCCCC--------------C--C
Confidence 999976422111010001122 245554 579999666788887753 322 222210000 0 0
Q ss_pred cCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE--e-cCCCceEEEEEecCCCCCcccchHHH
Q 041829 349 IPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEV--V-TPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 349 ~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~--~-~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
-++..+...+++++++.+.. .++.++..++++++++.|+++ +... . .++..+++.+.+.+. .
T Consensus 269 -~~~~~~~~~aa~aaL~~~~~---~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~g~~~~~~~~~~----------~ 333 (379)
T TIGR00707 269 -FGGNPLACAAALAVLEVIEK---ERLLENVKEKGDYFKERLEEL-GKNYPNKEVRGKGLMLGIELEAP----------C 333 (379)
T ss_pred -CCCCHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHHHHH-HhhCCCCccccCceEEEEEecCc----------H
Confidence 01112233345555555432 245566777888888887764 2221 1 122344566665421 2
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.++.+.|.+.|. .+.+. +..++|+++ +...+++++++++++|+++
T Consensus 334 ~~~~~~l~~~Gv-~v~~~---~~~~lRi~~-~~~~t~~~i~~~~~~l~~~ 378 (379)
T TIGR00707 334 KDIVKKALEKGL-LVNCA---GPKVLRFLP-PLIITKEEIDEAVSALEEA 378 (379)
T ss_pred HHHHHHHHHCCc-EEeeC---CCCEEEEEC-CCcCCHHHHHHHHHHHHHh
Confidence 567778888884 44442 236899998 6677999999999999865
No 264
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.71 E-value=6.9e-15 Score=150.19 Aligned_cols=368 Identities=8% Similarity=0.027 Sum_probs=210.5
Q ss_pred CHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHH-HHHcCC--CCCCcCCCCCCeEEcCchhHHHHHHHHHHHH-H
Q 041829 88 SVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWL-AKLLKL--PEDFLSSGQGGGVIQGTASEAVLVVLLAARD-K 163 (486)
Q Consensus 88 ~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~l-a~l~g~--~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~-~ 163 (486)
+++..+.++..+... ..|...++..++.+++.++. .+.++. +.. +..+.++|+|+++++..++.+... .
T Consensus 113 ~~~~~v~e~~~~~~~---~~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~----~~~~I~vT~Ga~~al~~~~~aL~~~~ 185 (527)
T PRK09275 113 DADEFVYELVDGIIG---DNYPVPDRMLKHTEKIVKDYLRQEMCGGRPPK----GEFDLFAVEGGTAAMCYIFDSLKENG 185 (527)
T ss_pred CCCHHHHHHHHHHhc---CCCCCCCCCHHHHHHHHHHHHHhhccCCCCCC----CcCeEEEeCCHHHHHHHHHHHHhhhh
Confidence 445666665554433 24777788888888888744 443332 110 012589999999998887765321 1
Q ss_pred HHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCC
Q 041829 164 ALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGT 243 (486)
Q Consensus 164 ~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~ 243 (486)
.+. +++.|+++.+.+..+...+++.|.+. .++.++.+++++|++|+++|++++++. +.+|+++.|+
T Consensus 186 ll~-------pGD~Vlv~~P~y~~Y~~~~~l~g~~~-~~v~v~~~~~~~f~~d~~~l~~~~~~~------tkai~l~nP~ 251 (527)
T PRK09275 186 LLK-------AGDKIALMTPIFTPYLEIPELPRYDL-EVVHINADEENEWQYPDSELEKLRDPS------IKALFLVNPS 251 (527)
T ss_pred cCC-------CCCEEEEeCCChHHHHHHHHHcCCCe-EEEEeecCcccCCCCCHHHHHhhcCCC------CCEEEEeCCc
Confidence 111 78889999999999999999887622 445555555556999999999876543 3478888999
Q ss_pred ccccccCC---hHHHHHHHHH--hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCc
Q 041829 244 TSSTAVDP---LLALGNIAKS--NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDR 317 (486)
Q Consensus 244 t~tG~id~---l~~I~~ia~~--~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~ 317 (486)
||||.+-+ +++|+++|++ +++|+++|.+|+.+.. .+.........--.+..++.|.++.| .-.|+++..+.
T Consensus 252 NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~s~~~~~~~~~I~v~SfSK~f~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 252 NPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYGTFVD---DFRSLFAVLPYNTILVYSFSKYFGATGWRLGVIALHED 328 (527)
T ss_pred CCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCChhhcc---cccCHHHhCCCCEEEEeehhhhccCcHhHHhhhhcCch
Confidence 99999966 7888889965 4999999999986432 22221111111124455678998755 44788776654
Q ss_pred hHHHHHhcCC---------ccc--ccccccccC-------CccCCCCC-ccCCCCCC-CcHHHHHHHHH--hChhhHHHH
Q 041829 318 NTLIQSLSTN---------PEF--LKNKASQAN-------MVVDYKDW-QIPLGRRF-RSLKLWMVLRL--YGLENLQGY 375 (486)
Q Consensus 318 ~~~~~~~~~~---------~~y--l~~~~~~~~-------~~~~~~~~-~~~~sr~~-~~l~~~~~l~~--~g~~g~~~~ 375 (486)
..+.+.+..- ..| +........ ........ +...+... .+.+++..... .+.+..+++
T Consensus 329 ~v~~~~i~~l~~~~~~~~~~ry~~~~~~p~~~~fidrlvad~~~v~~~~t~~~s~p~Q~a~al~~~~all~~~~~~~~~~ 408 (527)
T PRK09275 329 NVFDKLIAKLPEEKKKELDKRYSSLTTDPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALLDEEDAYKKAM 408 (527)
T ss_pred hHHHHHHHhccHHHHHHHHhhhhhccCCcchhhhHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHhCchHHHHHH
Confidence 2222111100 000 000000000 00000000 00011110 01111112221 234556677
Q ss_pred HHHHHHHHHHHHHHHhcCCCeEEe-cCCCceEEEEE-ecCCCC--Ccccc------hHHHHHHHHHHHccCcEE-EEeee
Q 041829 376 IRNHIQLAKHFEGLVAQDLRFEVV-TPRIFSLVCFR-LLPPHN--DEDHG------NKLNHKLLDDINSTGKIF-ISHTV 444 (486)
Q Consensus 376 ~~~~~~~a~~l~~~l~~~~~~~~~-~~~~~~~v~f~-~~~~~~--~~~~~------~~~~~~l~~~l~~~g~~~-~~~~~ 444 (486)
.+.+.++.+.+.+.| ++.+. .+|.....+|- +..... ...+. .....++..+|.++.++. ++++.
T Consensus 409 ~~~~~~Rr~~l~~~L----g~~~~~~~p~g~fY~~~di~~~~~~~~g~~f~~~l~~~~~~~~f~~~Ll~e~gV~v~PG~~ 484 (527)
T PRK09275 409 KDIIRRRYKALYEGL----GLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFADYLKKNYSPVDLLFRLAEETGVVLLPGGG 484 (527)
T ss_pred HHHHHHHHHHHHHHc----CCCCcCCCCCeeEEEEEEhHHhhhhccCchhhhhhhccCCHHHHHHHHHhcCCEEEeCchh
Confidence 777777777787777 33322 24555555443 321110 00000 001245666777654454 44444
Q ss_pred EC-CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhhhc
Q 041829 445 LS-GKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARLSI 485 (486)
Q Consensus 445 ~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~~~ 485 (486)
+. +..++|+|+++ .+++++..+.++|++++++..++|.+
T Consensus 485 Fg~~~~~vRis~a~--~~~~~~~~~~~rl~~~l~~y~~~~~~ 524 (527)
T PRK09275 485 FGGPEWSVRVSLAN--LNEEDYAKIGKAIRKLLDEYYEEYKK 524 (527)
T ss_pred hCCCCCeEEEEEec--CCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 53 34689999944 48899999999999999988877753
No 265
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.71 E-value=4.4e-14 Score=142.67 Aligned_cols=302 Identities=14% Similarity=0.129 Sum_probs=181.5
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC-chhHHHHHHHhCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT-HSALQKACQIGGI 197 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-H~s~~~a~~~~g~ 197 (486)
.++.+.+++++|.+. .+++++|++||..|+..+|.......+.. .++.+|++.... |-+...++...|-
T Consensus 82 ~~l~~~l~~~~~~~~---------~~~~~SGs~A~e~ai~~a~~~~~~~~~~~-~~~~~i~~~~~~yhg~~~~~~~~~~~ 151 (401)
T TIGR01885 82 GEFAEYVTKLFGYDK---------VLPMNTGAEAVETAIKLARKWGYKVKGIP-ENQAIIVSAKGNFHGRTLGAISMSTD 151 (401)
T ss_pred HHHHHHHHhhcCCCE---------EEEeCccHHHHHHHHHHHHHHhhhhcCCC-CCCCEEEEECCCcCcccHHHHhCcCC
Confidence 334444888888643 78999999999999999887532110000 134566666666 5565655554331
Q ss_pred -------CC--CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCC
Q 041829 198 -------HP--QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGM 264 (486)
Q Consensus 198 -------g~--~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~ 264 (486)
+. ..+..+| .-|+++|++++++. +....+|++....+++|.+.| +++|.++|++||+
T Consensus 152 ~~~~~~~~~~~~~~~~~~-------~~d~~~le~~l~~~---~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~ 221 (401)
T TIGR01885 152 PDSRTNFGPYVPGFKKIP-------YNNLEALEEALEDH---GPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNV 221 (401)
T ss_pred cccccccCCCCCCceEeC-------CCCHHHHHHHHHhc---CCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCC
Confidence 10 1223333 22789999988642 233556777777888899877 9999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++++|++|.++......+.....++ ..|.++++ |.++.. ..+|+++.+ ++ +.+.+... +.
T Consensus 222 lli~DEv~~g~g~~G~~~~~~~~~~-~~di~~~g--K~l~~g~~~ig~v~~~-~~-i~~~~~~~--~~------------ 282 (401)
T TIGR01885 222 LLIADEIQTGLGRTGKLLCVDHENV-KPDIVLLG--KALSGGVYPVSAVLAD-DD-VMLTIKPG--EH------------ 282 (401)
T ss_pred EEEEechhhCCCccchhhHHhhcCC-CCCEEEee--ccccCCCCCcEEEEEc-HH-HHhhccCC--CC------------
Confidence 9999999865321111111111122 46877765 988754 356777664 33 22222210 00
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEEEEEecCCCCCcccc
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLVCFRLLPPHNDEDHG 421 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v~f~~~~~~~~~~~~ 421 (486)
..+. ++.+.....+.++++.+..+. +.++..+++++|++.|++++ ..++. .+...++.+.+.... .
T Consensus 283 --~~t~-~~~p~~~~aa~a~L~~i~~~~---l~~~~~~~~~~~~~~L~~l~-~~~~~~~~g~g~~~~i~~~~~~-----~ 350 (401)
T TIGR01885 283 --GSTY-GGNPLACAVAVAALEVLEEEK---LAENAEKLGEIFRDQLKKLP-KPIITEVRGRGLLNAIVIDESK-----T 350 (401)
T ss_pred --CCCC-CCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHhcc-CCceeEEeecCeeEEEEeccCc-----c
Confidence 0011 122233334455565554333 44567778999999999873 23321 233344444443211 0
Q ss_pred hHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 422 NKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 422 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.....++.+.|.++| +++.+. +...+|++. +...|++||++++++|+++.
T Consensus 351 ~~~~~~l~~~l~~~G-v~v~~~---~~~~lRi~p-~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 351 GRTAWDLCLKLKEKG-LLAKPT---HGNIIRLAP-PLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred hhHHHHHHHHHHhCC-EEEEec---CCCEEEEeC-CccCCHHHHHHHHHHHHHHh
Confidence 123467888888887 555442 235899998 77899999999999998764
No 266
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.71 E-value=9.2e-15 Score=147.41 Aligned_cols=319 Identities=13% Similarity=0.056 Sum_probs=199.5
Q ss_pred HHHHHHHHHhcCc-CccccccChhhHHHHHHHHHHHHHHcCC--CCCCcCCCCCCe--EEcCchhHHHHHHHHHHHHHHH
Q 041829 91 GFLGEMLSAGLNI-VGFSWITSPAATELEMIVLDWLAKLLKL--PEDFLSSGQGGG--VIQGTASEAVLVVLLAARDKAL 165 (486)
Q Consensus 91 ~~~~~~l~~~~n~-~~~~~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~--~~t~ggt~a~~~al~~a~~~~~ 165 (486)
..+.+.+...... ....|....+..++.+.+.+|+.+..+. +++ .. ++|+|+++|+..++.+....
T Consensus 47 ~~l~~a~~~~~~~~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~-------~i~v~iT~Ga~~al~~~~~~l~~~-- 117 (396)
T PRK09257 47 RAVKKAEARLLETETTKNYLPIEGLAAYRQAVQELLFGADSPALAAG-------RVATVQTPGGTGALRVGADFLKRA-- 117 (396)
T ss_pred HHHHHHHHHhcccccCCCcCCCCCCHHHHHHHHHHhcCCCCcccccC-------eEEEEecCCccHHHHHHHHHHHHh--
Confidence 5566666665543 2335777778899999988888665442 222 34 89999999988876543210
Q ss_pred HHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc
Q 041829 166 KRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS 245 (486)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~ 245 (486)
. +++.|++++.+++.+..+++.+|+ +++.+|+...+++.+|+++|++++++... +..+++.+.++||
T Consensus 118 ~-------pGd~Vlv~~P~y~~~~~~~~~~g~---~~v~v~~~~~~~~~~d~~~l~~~~~~~~~---~~~~~i~~~p~NP 184 (396)
T PRK09257 118 F-------PDAKVWVSDPTWPNHRAIFEAAGL---EVKTYPYYDAATKGLDFDAMLADLSQAPA---GDVVLLHGCCHNP 184 (396)
T ss_pred C-------CCCeEEECCCCcccHHHHHHHcCC---cEEEEeccccccCccCHHHHHHHHHhCCC---CCEEEEeCCCCCC
Confidence 0 678899999999999999999999 99999983222479999999998864211 1256677889999
Q ss_pred ccccC---ChHHHHHHHHHhCCEEEeeccccchhccCc-cchhc--ccCCcCCCceeeecccccCC-CCcceEEEE--eC
Q 041829 246 STAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICP-EYRQY--IDGVEEADSFNMNAHKWFLT-NFDCSALWV--KD 316 (486)
Q Consensus 246 tG~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~-~~~~~--~~~~~~aDs~~~~~hK~l~~-p~~~g~l~~--r~ 316 (486)
||.+- .+++|+++|++|++|+++|.+|..+..... ..... +.+...--.++.++.|.++. ..-+|++++ .+
T Consensus 185 TG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~~~~GlRiG~~~~~~~~ 264 (396)
T PRK09257 185 TGADLTPEQWDELAELLKERGLIPFLDIAYQGFGDGLEEDAYGLRAFAAAGLELLVASSFSKNFGLYGERVGALSVVAED 264 (396)
T ss_pred CCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccchHHHHHHHHHHHhcCCcEEEEEEcCCcCccccccceeEEEEeCC
Confidence 99994 478889999999999999999986542111 11111 11111112456788999986 567898874 33
Q ss_pred chHHHHHhc---C--CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC--------hhhHHHHHHHHHHHH
Q 041829 317 RNTLIQSLS---T--NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG--------LENLQGYIRNHIQLA 383 (486)
Q Consensus 317 ~~~~~~~~~---~--~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--------~~g~~~~~~~~~~~a 383 (486)
+..+.+... . ...+.. ...+...++.+.+. .+.+++..++..++.
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~----------------------~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~rr 322 (396)
T PRK09257 265 AEEADRVLSQLKATIRTNYSN----------------------PPAHGAAIVATILNDPELRAEWEAELEEMRERIKAMR 322 (396)
T ss_pred HHHHHHHHHHHHHHhhhhcCC----------------------CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 332221111 0 011110 01111112222221 234556677778888
Q ss_pred HHHHHHHhcCC---CeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCC
Q 041829 384 KHFEGLVAQDL---RFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLT 460 (486)
Q Consensus 384 ~~l~~~l~~~~---~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 460 (486)
+.+.+.|++.. ++++. .|..+++.|--.+ .++..++.++.++++.+. .|+++++ .
T Consensus 323 ~~l~~~L~~~~~~~~~~~~-~p~gg~~~w~~l~------------~~~~~~l~~~~~V~~~p~-------~ri~~~~--~ 380 (396)
T PRK09257 323 QLLVEALKAKGPSRDFDFI-ARQRGMFSYSGLT------------PEQVDRLREEFGVYAVGS-------GRINVAG--L 380 (396)
T ss_pred HHHHHHHHhcCCCCCcccc-cccceEEEecCCC------------HHHHHHHHHcCCEEEcCC-------CeEEEee--C
Confidence 88999998862 25543 4555555432111 123444544434555442 2999832 5
Q ss_pred CHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDK 475 (486)
Q Consensus 461 t~~di~~~~~~l~~~ 475 (486)
++++|++++++|+++
T Consensus 381 ~~~~i~~~~~~i~~~ 395 (396)
T PRK09257 381 NESNIDYVAEAIAAV 395 (396)
T ss_pred CHHHHHHHHHHHHhh
Confidence 889999999999864
No 267
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.71 E-value=3.5e-14 Score=144.80 Aligned_cols=332 Identities=14% Similarity=0.083 Sum_probs=218.8
Q ss_pred HHHHHHHHHhcC---cC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHH
Q 041829 91 GFLGEMLSAGLN---IV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALK 166 (486)
Q Consensus 91 ~~~~~~l~~~~n---~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~ 166 (486)
....+.+...+. .. ...|....+..++.+.+.+++....|...+ ....++|+|+++|+..++.+..+
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~-----~~~IiiT~G~q~al~l~~~~l~~---- 177 (459)
T COG1167 107 EALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCE-----PEQIVITSGAQQALDLLLRLLLD---- 177 (459)
T ss_pred HHHHHHHHHHHhhcchhhhhcCCCCCCcHHHHHHHHHHHHHhcCCccC-----cCeEEEeCCHHHHHHHHHHHhCC----
Confidence 344444444432 22 345666688999999999999988887654 12589999988887765554333
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEE-ecCCcc
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCA-TVGTTS 245 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~-~~~~t~ 245 (486)
+++.|++.+.+|+....+.+.+|+ +++.||+|.+ .||+|+|++.++... |.++.+ ....||
T Consensus 178 -------pGd~v~vE~PtY~~~~~~~~~~g~---~~~~vp~d~~---G~~~e~le~~~~~~~-----~k~~y~~P~~qNP 239 (459)
T COG1167 178 -------PGDTVLVEDPTYPGALQALEALGA---RVIPVPVDED---GIDPEALEEALAQWK-----PKAVYVTPTFQNP 239 (459)
T ss_pred -------CCCEEEEcCCCcHHHHHHHHHcCC---cEEecCCCCC---CCCHHHHHHHHhhcC-----CcEEEECCCCCCC
Confidence 789999999999999999999999 9999999965 699999999997752 334444 446889
Q ss_pred ccccCCh---HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcC--CCceeeecccccCCCCcceEEEEeCchHH
Q 041829 246 STAVDPL---LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEE--ADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 246 tG~id~l---~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~--aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
||..-++ ++|.++|++|++|++-|..|+-+....+.... +.++.. --....++.|.+.....+|+++.... .+
T Consensus 240 tG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~-l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~-~~ 317 (459)
T COG1167 240 TGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPPP-LKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPE-LI 317 (459)
T ss_pred CCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCCC-hHhhCCCCCEEEEeeehhhcccccceeeeeCCHH-HH
Confidence 9999665 68999999999999999999876554222211 122222 22557778999998888999887643 22
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC--hhhHHHHHHHHHHHHHHHHHHHhcCCC-eE
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG--LENLQGYIRNHIQLAKHFEGLVAQDLR-FE 397 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g--~~g~~~~~~~~~~~a~~l~~~l~~~~~-~~ 397 (486)
.. +........ ..+..+....+...+. .| ...++++.+.+.+..+.+.+.|++..+ ..
T Consensus 318 ~~-~~~~k~~~~-----------------~~~s~~~Q~~la~~l~-~G~~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~ 378 (459)
T COG1167 318 EK-LLRLKQAAD-----------------LGPSSLSQAALAAFLL-SGHYDRHLRRLRREYARRRDALLEALAEYLPELA 378 (459)
T ss_pred HH-HHHHHHHhc-----------------CCCChHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCe
Confidence 21 111000000 0111111122233333 33 445566666777788888888888632 33
Q ss_pred EecCCCceEE-EEEecCCCCCcccchHHHHHHHHHHHccCcEEEE-eeeEC----CEeEEEEEecCCCCCHHHHHHHHHH
Q 041829 398 VVTPRIFSLV-CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFIS-HTVLS----GKYILRFAVGAPLTEWRHVNAAWEV 471 (486)
Q Consensus 398 ~~~~~~~~~v-~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~-~~~~~----~~~~lRi~~~~~~~t~~di~~~~~~ 471 (486)
.+..|..+++ +.++.+ . .+ ..++..+..++|..... +..+. ..+++|+++++ .+.+++++.++.
T Consensus 379 ~~~~p~gG~flwl~l~~-~-----~~--~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~--~~~e~i~~gi~~ 448 (459)
T COG1167 379 TWTRPEGGLFLWLELPE-G-----ID--ARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS--PSEEEIEEGIKR 448 (459)
T ss_pred eeecCCceEEEEEEcCC-C-----CC--HHHHHHHHHHCCCEEEcCCccccCCCCCCCeEEEEcCC--CCHHHHHHHHHH
Confidence 3445555544 445443 2 12 25677888888866555 22221 24589999943 479999999999
Q ss_pred HHHHHHHHH
Q 041829 472 MQDKASALL 480 (486)
Q Consensus 472 l~~~~~~l~ 480 (486)
|.+++.+..
T Consensus 449 l~~~~~~~~ 457 (459)
T COG1167 449 LAALLREAA 457 (459)
T ss_pred HHHHHHHHh
Confidence 988887654
No 268
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=99.71 E-value=3.6e-15 Score=147.22 Aligned_cols=340 Identities=11% Similarity=0.076 Sum_probs=220.2
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhH
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSAL 188 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~ 188 (486)
++..+..++-.++.+||+++.|++.- .+-.++|..+-..+|.+.|.....+ ++. .+-+.+++..+|-..
T Consensus 575 eQaqGY~~lf~~Le~~Lc~iTG~D~~--------s~QPNsGA~GEYaGL~~IRaY~~~k-ge~--hRnvClIPvSAHGTN 643 (1001)
T KOG2040|consen 575 EQAQGYQQLFTELEKDLCEITGFDSF--------SLQPNSGAQGEYAGLRVIRAYLESK-GEG--HRNVCLIPVSAHGTN 643 (1001)
T ss_pred HHHhhHHHHHHHHHHHhheeecccce--------eecCCCCcccchhhHHHHHHHHHhc-cCC--cceeEEEeecccCCC
Confidence 45667778888888999999999862 3334456666666677666543322 221 567888899999999
Q ss_pred HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC-ChHHHHHHHHHhCCEEE
Q 041829 189 QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD-PLLALGNIAKSNGMWFH 267 (486)
Q Consensus 189 ~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id-~l~~I~~ia~~~g~~lh 267 (486)
...++++|+ +|+.|.++.+ +.+|..+|+++.++...+ -.++.+|+++|. |.++ .|++++++.+++|--+.
T Consensus 644 PASA~Magm---kvvpV~~~~~--G~id~~dLk~kaekh~~~---Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVY 714 (1001)
T KOG2040|consen 644 PASAAMAGM---KVVPVGCDAN--GNIDMVDLKAKAEKHKDN---LAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVY 714 (1001)
T ss_pred hhhHHhcCC---EEEEeeccCC--CCccHHHHHHHHHHhhhh---hheeEEeccccc-ccccccHHHHHHHHHhcCCEEE
Confidence 999999999 9998888865 499999999998776543 357888888875 7775 59999999999999999
Q ss_pred eeccccchhc-cCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccC-CccCCC
Q 041829 268 VDAAYAGSAC-ICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN-MVVDYK 345 (486)
Q Consensus 268 vD~A~g~~~~-~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~-~~~~~~ 345 (486)
.|||.--... +|. ..+ -++|...++.||.+..|-|.|.--+..-. . .+.-++||....--+. ...+..
T Consensus 715 lDGANMNAqVGlc~-pGd-----~GaDV~HLNLHKTFcIPHGGGGPg~gPIg-V---K~HLapfLP~HpVvs~~~~~~~~ 784 (1001)
T KOG2040|consen 715 LDGANMNAQVGLCR-PGD-----IGADVCHLNLHKTFCIPHGGGGPGMGPIG-V---KKHLAPFLPSHPVVSPGRPEDTS 784 (1001)
T ss_pred ecCCCccceecccC-Ccc-----ccccceeecccceeeecCCCCCCCCCccc-h---hhhccccCCCCCccCCCCCCCCC
Confidence 9998543222 222 112 28999999999999888665443332211 1 1223455543221100 000001
Q ss_pred CCccCCCCCCC---cH-HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCccc-
Q 041829 346 DWQIPLGRRFR---SL-KLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDH- 420 (486)
Q Consensus 346 ~~~~~~sr~~~---~l-~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~- 420 (486)
..+.-.+.++. .+ -.|+.++.+|..|+++.-+-.+-+|+|+.++|+.+ .+++-....+.|.-.|.-+-...++
T Consensus 785 ~~gsVsaaP~Gsa~ILpISwaYikmMG~~GL~~as~~AiLNaNYMakRLe~h--Ykil~~~~~~~vaHEFIlD~r~fK~~ 862 (1001)
T KOG2040|consen 785 PVGSVSAAPWGSALILPISWAYIKMMGSGGLKDASKIAILNANYMAKRLESH--YKILFRGENGLVAHEFILDLRPFKKT 862 (1001)
T ss_pred CccceeccCCCcceeehhHHHHHHHhcccccchhhHHHhhhhHHHHHHHhhc--cceeEecCCcceeeeeeeechhhccc
Confidence 11111111221 22 46999999999999999999999999999999986 5554333333443322211000000
Q ss_pred chHHHHHHHHHHHccCcEEEEee-eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 421 GNKLNHKLLDDINSTGKIFISHT-VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 421 ~~~~~~~l~~~l~~~g~~~~~~~-~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
.+-....+.++|.+.| |-.|+ .|.-.+.+=|-. ...-+++++|++++++..+.+++..-+
T Consensus 863 agieavDvAKRL~DYg--FHaPTmswPV~gtLMIEP-TESE~k~ElDRfcdAliSIreEI~~ie 923 (1001)
T KOG2040|consen 863 AGIEAVDVAKRLMDYG--FHAPTMSWPVAGTLMIEP-TESEDKAELDRFCDALISIREEIAQIE 923 (1001)
T ss_pred cCCcHHHHHHHHHhcc--CCCCccccccCCceEecc-CccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111245677888777 23333 233234565555 566688999999999998888876543
No 269
>PRK04311 selenocysteine synthase; Provisional
Probab=99.70 E-value=1.9e-14 Score=145.44 Aligned_cols=290 Identities=15% Similarity=0.142 Sum_probs=172.4
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh------HHHHHH
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA------LQKACQ 193 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s------~~~a~~ 193 (486)
.+.+.+++++|.+. .+++++|+.|+..++.+. . +++.|+++...|++ +...++
T Consensus 131 ~~e~~lA~l~Gae~---------a~vv~sgtaAl~l~l~~l-~-----------~GdeVIvs~~e~~~~ggs~~i~~~~~ 189 (464)
T PRK04311 131 ALAALLCALTGAED---------ALVVNNNAAAVLLALNAL-A-----------AGKEVIVSRGELVEIGGAFRIPDVMR 189 (464)
T ss_pred HHHHHHHHHhCCCe---------EEEECCHHHHHHHHHHHh-C-----------CCCEEEEcchhhhhcCcchhhHHHHH
Confidence 44455999999764 688888898887766432 1 56778888876663 334567
Q ss_pred HhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc--cc--ccCChHHHHHHHHHhCCEEEee
Q 041829 194 IGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS--ST--AVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~--tG--~id~l~~I~~ia~~~g~~lhvD 269 (486)
..|+ +++.|+.+. ..++++++++|++++ .+|+.++.+|+ +| ..-|+++|+++||+||+++++|
T Consensus 190 ~~G~---~l~~v~~~~----~t~~~dle~aI~~~T------klV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD 256 (464)
T PRK04311 190 QAGA---RLVEVGTTN----RTHLRDYEQAINENT------ALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYD 256 (464)
T ss_pred HCCc---EEEEECCCC----CCCHHHHHHhcCccC------eEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEE
Confidence 7788 888887642 468999999997654 46777787775 45 5679999999999999999999
Q ss_pred ccccchhccCccc----hhcccC-C-cCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 270 AAYAGSACICPEY----RQYIDG-V-EEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 270 ~A~g~~~~~~~~~----~~~~~~-~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++.|... ....+ ...+.. + .++|.+++++|||+++|. +|+++.++. .+.+ +...+ .....
T Consensus 257 ~gsG~l~-~~~~~gl~~~p~~~~~l~~GaDiv~fSg~K~LgGp~-~G~i~g~~~-li~~-l~~~~-~~r~l--------- 322 (464)
T PRK04311 257 LGSGSLV-DLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE-LIAR-LKKHP-LKRAL--------- 322 (464)
T ss_pred CCCcccc-cchhccCCCCCchhhHHhcCCcEEEecCcccccCCc-eEEEEEcHH-HHHH-Hhhch-hHHHH---------
Confidence 9754321 00000 011110 1 279999999999999994 888887643 3322 21110 00000
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHh-----------ChhhHHHHHHHHHHHHHHHHHHHhcCC--C--eEEecC-------
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLY-----------GLENLQGYIRNHIQLAKHFEGLVAQDL--R--FEVVTP------- 401 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~-----------g~~g~~~~~~~~~~~a~~l~~~l~~~~--~--~~~~~~------- 401 (486)
...+ ....++.+++..+ +...+....++..++|+.+.+.|++++ + +++...
T Consensus 323 ------r~dk-~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~~~~A~~la~~L~~~~~~~~~~~~~~~~~~~ggg 395 (464)
T PRK04311 323 ------RVDK-LTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEELRARAERLAAALKAALGAAFAVEVVPSFSQVGGG 395 (464)
T ss_pred ------hcch-HHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHHHHHHHHHHHHHHhccCCCeeEEEEEccCccCCC
Confidence 0000 0001122222211 112234455677778888888888764 3 344421
Q ss_pred --C--CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 402 --R--IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 402 --~--~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
| .++-+++.+.+... ...++.++|.+...-.+. -..++. +.+-+ ....++|++.++++|+++.
T Consensus 396 s~p~~~~~~~~v~~~~~~~-------~~~~l~~~lr~~~~~i~~-r~~~~~--~~ld~--r~~~~~~~~~~~~~~~~~~ 462 (464)
T PRK04311 396 SLPVDRLPSAAVTLTPKDR-------SLEALAARLRLLPPPVIG-RIEDGR--LLLDL--RTLEEEDEERLAAALLEAL 462 (464)
T ss_pred CCcCCCCCeEEEEEeCCCC-------CHHHHHHHHhcCCCCEEE-EEECCE--EEEEe--CcCCHHHHHHHHHHHHHHh
Confidence 2 23445555544221 114566666543322222 223333 44433 3447899999999998875
No 270
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.70 E-value=2.7e-14 Score=142.17 Aligned_cols=288 Identities=13% Similarity=0.024 Sum_probs=177.7
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..++.+. +++.++.+++ +.++|+|+++++..++.+. . +++.|++....+..+...++
T Consensus 59 ~~~Lr~a----ia~~~~v~~~-------~I~it~G~~~~i~~~~~~l-~-----------~g~~vlv~~P~y~~~~~~~~ 115 (360)
T PRK07392 59 YRELRLA----LAQHHQLPPE-------WILPGNGAAELLTWAGREL-A-----------QLRAVYLITPAFGDYRRALR 115 (360)
T ss_pred HHHHHHH----HHHHhCcChh-------hEEECCCHHHHHHHHHHHh-C-----------CCCeEEEECCCcHHHHHHHH
Confidence 3456655 5666677765 5889999888876655432 1 34468889999999999999
Q ss_pred HhCCCCCCeEEEeCCCCCCC---ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 194 IGGIHPQNFRVLKTDSSTNY---SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~---~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
.+|+ +++.+|.+.++.+ ..+++.+++... .+.+++++.++||||.+-+.++|.++++++++ +++|.
T Consensus 116 ~~g~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE 184 (360)
T PRK07392 116 AFGA---TVKELPLPLDQPSPGLTLRLQTLPPQLT-------PNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDE 184 (360)
T ss_pred HcCC---eEEEEecccccCCcccccCHHHHHHhcc-------CCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEEC
Confidence 9999 9999999865433 245555544321 24578888999999999999999999999985 67799
Q ss_pred cccchhccCccchhcccCCcCCC--ceeeecccccC-CCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 271 AYAGSACICPEYRQYIDGVEEAD--SFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 271 A~g~~~~~~~~~~~~~~~~~~aD--s~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
+|..+.... ........+...+ .+..++.|.++ ...-+|+++... ..+.+.......+
T Consensus 185 ~y~~~~~~~-~~~s~~~~~~~~~~vi~i~S~SK~~~l~GlRiG~~v~~~-~~~~~~~~~~~~~----------------- 245 (360)
T PRK07392 185 AFMDFLPPD-AEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHP-DRLQRWQQWRDPW----------------- 245 (360)
T ss_pred chhhhccCc-cccchHHHhhcCCCEEEEEechhhhcCCchheeeeeCCH-HHHHHHHhhCCCC-----------------
Confidence 998654311 1111111111112 44567899998 446688887743 3333221111000
Q ss_pred ccCCCCCCCcHHHHHHHHHhCh-hhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHH
Q 041829 348 QIPLGRRFRSLKLWMVLRLYGL-ENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 348 ~~~~sr~~~~l~~~~~l~~~g~-~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
....+..+++...+.. +..+...+...+.++++.+.|++++++.+. ++..+.+.+++.. ...
T Consensus 246 ------~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~-~~~~~fl~~~~~~----------~~~ 308 (360)
T PRK07392 246 ------PVNGLAAAAAIAALADRDFQQQTWAWLPPAREALFQGLASLPGLTPL-PSAANFLLVQSQG----------SAL 308 (360)
T ss_pred ------CCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhCCCcEEC-CCCCCEEEEEcCC----------CHH
Confidence 1122334444333332 233334455667788899999988888865 3444455445431 124
Q ss_pred HHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 427 KLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 427 ~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
++..++.+ .| +.+.+. .+. +.+++|++++ +.++.+++.++|+++.
T Consensus 309 ~l~~~ll~~~g-v~v~pg~~f~~~~~~~iRi~~~----~~~~~~~l~~al~~~~ 357 (360)
T PRK07392 309 QLQEKLLQQHR-ILIRDCLSFPELGDRYFRVAVR----TEAENQRLLEALAAIL 357 (360)
T ss_pred HHHHHHHhhCC-EEEEeCCCCCCCCCCEEEEEeC----CHHHHHHHHHHHHHHh
Confidence 56666544 56 444444 333 3469999993 3455667777766543
No 271
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.70 E-value=1e-14 Score=137.54 Aligned_cols=325 Identities=13% Similarity=0.086 Sum_probs=223.0
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..-+...+.+++.+.+.+.-|-+..|. ....++++|+|.+|.+.+-+..+ |++..+++.+.++.+.
T Consensus 119 dy~Gl~~frqa~A~Fm~~~r~~~v~fd---P~~~Vv~~G~T~ane~l~fcLad-----------pgdafLvPtPyY~gfd 184 (471)
T KOG0256|consen 119 DYHGLPSFRQAVAEFMERARGNRVKFD---PERVVVTNGATSANETLMFCLAD-----------PGDAFLVPTPYYPGFD 184 (471)
T ss_pred cccCchHHHHHHHHHHHHHhCCCCccC---ccceEEecccchhhHHHHHHhcC-----------CCceeeecCCCCCccc
Confidence 344677888998888888887665543 23689999999888776555444 8888999999998888
Q ss_pred HHHHH-hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCE
Q 041829 190 KACQI-GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~~-~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~ 265 (486)
.-+++ .|+ +++.|.+...++|+++.++||+++.+..+.|.+...|+++.|+||.|.+-+ +..+...|.++++.
T Consensus 185 rdl~~rTgv---eivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniH 261 (471)
T KOG0256|consen 185 RDLRWRTGV---EIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIH 261 (471)
T ss_pred ccceeccCc---eEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceE
Confidence 76664 588 999999988777999999999999999999999999999999999999955 66677778899999
Q ss_pred EEeeccccchhccCccchhcccC---Cc-CCC--ceeeecccccCCCC-cceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 266 FHVDAAYAGSACICPEYRQYIDG---VE-EAD--SFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~---~~-~aD--s~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
+++|+.|++..+..+++...+.- .+ ..| -+..+..|=++.|. -.|+++..++.....+-+...-++.....
T Consensus 262 vI~DEIya~sVF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYS~ne~VvsaA~kmssf~~vSs~t-- 339 (471)
T KOG0256|consen 262 VISDEIYAGSVFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKMSSFGLVSSQT-- 339 (471)
T ss_pred EEeehhhcccccCccCceEHHHHhhccccCCCcEEEEEEeccccCCCceEEEEEEecChHHHHHHHHHhhccCCcHHH--
Confidence 99999999987765555432211 11 223 35677888888873 47888888876544332222111111000
Q ss_pred CCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecC---CC
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLP---PH 415 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~---~~ 415 (486)
-.-+.....=..+-.+.+++.-.|....-+++.+.|+++ |+..+ +...+++||.--. .+
T Consensus 340 ----------------Q~~la~LLSD~~f~~~yl~en~~Rl~~rh~~~~~gLk~l-gI~cl-~s~AGlF~wvDlr~lL~s 401 (471)
T KOG0256|consen 340 ----------------QYLLASLLSDEEFTREYLRENNKRLRIRHRYIVEGLKAL-GIPCL-KSNAGLFCWVDLRKLLTS 401 (471)
T ss_pred ----------------HHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHhhHHhc-CCcee-ecCCeeEEEEEhHHhcCc
Confidence 000111111122334456666777777888999999998 78877 4556777765321 11
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeE---CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVL---SGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+ -+--..|.+++...-++-++|+.. ...+|+|+|+.+ ..++.++-.+++|+....
T Consensus 402 ~t----fe~El~Lw~~i~~~vklnlSpG~s~~C~EpGWFRvcFAn--~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 402 LT----FEGELELWERILDNVKLNLSPGSSCHCHEPGWFRVCFAN--MSEETLEVAMRRLKQFLD 460 (471)
T ss_pred CC----hHHHHHHHHHHHHhhccccCCCCcceecCCCeEEEEecc--CCHHHHHHHHHHHHHHHH
Confidence 11 111245667777664466666532 345799999943 467777778888888765
No 272
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.70 E-value=1.9e-14 Score=143.12 Aligned_cols=306 Identities=13% Similarity=0.075 Sum_probs=185.2
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhC
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVG 169 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~ 169 (486)
..+.+.+..... ...|....+..++.+++.+|+.+.+|.+ .+ ..+.++|+|++++...++.+....
T Consensus 37 ~~~~~~~~~~~~--~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~-----~~~I~it~G~~~~i~~~~~~l~~~------ 103 (357)
T TIGR03539 37 PLIRAALAAAAD--APGYPQTWGTPELREAIVDWLERRRGVPGLD-----PTAVLPVIGTKELVAWLPTLLGLG------ 103 (357)
T ss_pred HHHHHHHHHHHh--hCCCCcccCCHHHHHHHHHHHHHhcCCCCCC-----cCeEEEccChHHHHHHHHHHHcCC------
Confidence 334444444322 2345555667899999999999987765 22 126888999888876654432111
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..+|..+...++.+|+ +++.++ |++.+.. + .+.+|+++.++|+||.+
T Consensus 104 ----~gd~Vl~~~p~y~~~~~~~~~~g~---~~~~v~---------~~~~l~~---~------~~~~v~~~~p~NPtG~~ 158 (357)
T TIGR03539 104 ----PGDTVVIPELAYPTYEVGALLAGA---TPVAAD---------DPTELDP---V------GPDLIWLNSPGNPTGRV 158 (357)
T ss_pred ----CCCEEEECCCCcHHHHHHHHhcCC---EEeccC---------ChhhcCc---c------CccEEEEeCCCCCcCcc
Confidence 678899999999999999999998 776653 2222221 1 24578888999999998
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhccc----C-CcCCCceeeecccccCCC-CcceEEEEeCchHH
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYID----G-VEEADSFNMNAHKWFLTN-FDCSALWVKDRNTL 320 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~----~-~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~ 320 (486)
-+ +++|.++|+++|+++++|.+|+.+.. .+.....+. + ...-..++.++.|.++.| .-+|+++. +++.+
T Consensus 159 ~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~-~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~~~G~R~G~~i~-~~~~~ 236 (357)
T TIGR03539 159 LSVDELRAIVAWARERGAVVASDECYLELGW-EGRPVSILDPRVCGGDHTGLLAVHSLSKRSNLAGYRAGFVAG-DPALV 236 (357)
T ss_pred CCHHHHHHHHHHHHHcCeEEEEecchhhhcc-CCCCccceecccCCCccccEEEEeccccccCCCceeEEEEec-CHHHH
Confidence 65 67799999999999999999975332 111101110 0 001125566889997655 33677764 44433
Q ss_pred HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 321 IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 321 ~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
.........+ +.....+...++...+- ...+++..++..++++++.+.|++. ++.+.
T Consensus 237 ~~~~~~~~~~---------------------~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~L~~~-g~~~~ 294 (357)
T TIGR03539 237 AELLTVRKHA---------------------GLMVPAPVQAAMVAALGDDGHVAEQKARYAARRAQLKPALEKA-GFRID 294 (357)
T ss_pred HHHHHHHhhc---------------------ccCCCHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHc-CCCCc
Confidence 3221111000 00011222233333332 2445566667777888899999886 77654
Q ss_pred cCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---CCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 400 TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---SGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 400 ~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+|..+++.+...+. + ...+.+.|.+.|. .+.+... .+..++|+++.+ ++++++++++.|
T Consensus 295 -~p~~~~~~~~~~~~-------~--~~~~~~~l~~~gV-~v~pg~~f~~~~~~~iRis~~~---~~~~i~~~~~~l 356 (357)
T TIGR03539 295 -HSEAGLYLWATRGE-------D--AWDTVDRLAELGI-LVAPGDFYGPAGSQHVRVALTA---TDERIAAAVARL 356 (357)
T ss_pred -CCCccEEEEEECCC-------C--HHHHHHHHHhCCE-EECCccccCCCCCCeEEEEecC---CHHHHHHHHHhh
Confidence 45556555543321 1 1456677777774 4544432 235699999933 578999988776
No 273
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.70 E-value=4.4e-15 Score=144.45 Aligned_cols=338 Identities=14% Similarity=0.027 Sum_probs=210.2
Q ss_pred ccccCCCCCCHH-HHHHHHHHHhcCcCc------cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhH
Q 041829 79 YFAYYPSNSSVA-GFLGEMLSAGLNIVG------FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASE 151 (486)
Q Consensus 79 ~~~~~~~~~~~~-~~~~~~l~~~~n~~~------~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~ 151 (486)
-+.|.|++...| .++.++-...+|.+. .....++.+.++-+++.+.|+++++.|+++ .-.++++|||.
T Consensus 5 ~~nF~aGPa~lp~~Vl~~~~~~~~~~~~~g~si~eisHRs~~F~~i~~~~~~~Lr~Ll~~P~~y-----~Vlfl~GggT~ 79 (364)
T PRK12462 5 QLNFSGGPGALPDTVLEQVRQAVVELPETGLSVLGMSHRSSWFSSLLAQAEADLRDLLGIPDEY-----GVVFLQGGSSL 79 (364)
T ss_pred cceecCCCcCCCHHHHHHHHHHHhcccccCccccccccccHHHHHHHHHHHHHHHHHhCCCCCC-----eEEEEeccHHH
Confidence 345666665444 555555555555333 122357889999999999999999997754 13566666776
Q ss_pred HHHHHHHHHHHHHHHHhCccCCCCe-EE-EecCCCchh--HHHHHHHhCCCCCCeEEEeCCCCCC--CccCHHHHHHHHH
Q 041829 152 AVLVVLLAARDKALKRVGKNSLEKL-VV-YASDQTHSA--LQKACQIGGIHPQNFRVLKTDSSTN--YSLSPDSLAEAIS 225 (486)
Q Consensus 152 a~~~al~~a~~~~~~~~~~~~~~~~-~v-~~s~~~H~s--~~~a~~~~g~g~~~v~~v~~~~~~~--~~id~~~L~~~i~ 225 (486)
+.-.+++-... ++. ++ ++. ..+.+ +.+.++.+| ++..+......+ ...+++.++ +.
T Consensus 80 ~~ea~~~Nll~-----------~g~~~~~~~~-tG~fg~r~~~ea~~~g----~v~~~~~~~~~~~~~~p~~~~~~--~~ 141 (364)
T PRK12462 80 QFSMIPMNFSR-----------PGAAAPEYVT-TGYWSRKAIGEASRVA----AMRVVWDGAASGYRTLPSLAELD--WD 141 (364)
T ss_pred HHHHHHHHcCC-----------CCCcEEEEEe-CCHHHHHHHHHHHhcC----CceEecCcCCCCCCcCCCHHHhc--cC
Confidence 65554443221 233 33 333 34444 344455554 233333211111 245666651 11
Q ss_pred HHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCC
Q 041829 226 RDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLT 305 (486)
Q Consensus 226 ~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~ 305 (486)
++ ..+|.+|+..|.+|+..| ++.+.++..++||+.-+.+...++ +++.|.+..+.||.++
T Consensus 142 ~d------~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid--------~~~~dvi~agsQKnlg- 201 (364)
T PRK12462 142 AR------APFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFD--------VEAYGMVYAHAQKNLG- 201 (364)
T ss_pred CC------CcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCC--------hHHccEEEeeccccCC-
Confidence 21 347999999999999986 344446899999997654433222 2356999999999999
Q ss_pred CCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC-CCcHHHHHHHHHhChh--hHHHHHHHHHHH
Q 041829 306 NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR-FRSLKLWMVLRLYGLE--NLQGYIRNHIQL 382 (486)
Q Consensus 306 p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~-~~~l~~~~~l~~~g~~--g~~~~~~~~~~~ 382 (486)
|.|.++++++++. +.+.-...+.|+.-.... . ..+...+-+ +....+-.+++.+-.+ |++.+.+++.+.
T Consensus 202 P~Gltvvivs~~a-l~~~~~~~p~~ldy~~~~-----~--~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~k 273 (364)
T PRK12462 202 PAGVTVAIIRRAL-LERVPDTLPPMLDFRTHV-----E--HRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARK 273 (364)
T ss_pred CCceEEEEECHHH-HhhccccCCchhhHHHHH-----h--cCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHH
Confidence 8899999998864 333222223332210000 0 000111111 1223444556666566 999999999999
Q ss_pred HHHHHHHHhcCCCeEEec-CC---CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCC
Q 041829 383 AKHFEGLVAQDLRFEVVT-PR---IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAP 458 (486)
Q Consensus 383 a~~l~~~l~~~~~~~~~~-~~---~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~ 458 (486)
++.+++.|.+.++|.... .+ ..-.|+|++.. .++..++.+...+.|.+-+.+...- +.+|+|+ ..
T Consensus 274 a~~ly~~id~~~~~~~~~~~~~~RS~mnv~f~~~~--------~~l~~~f~~~a~~~gl~~lkGhr~v--gg~Ras~-yn 342 (364)
T PRK12462 274 AAMLYATLDALNEVIDCHAHRAARSTMNVAFRFRQ--------PRLDTLFKEQSTEAGFCGLSGHRSI--GGIRASL-YN 342 (364)
T ss_pred HHHHHHHHHhCCCcccCCCChhhcCcceEEEEcCC--------HHHHHHHHHHHHHCCCccccCCccc--CceEEEc-CC
Confidence 999999999998776432 21 23467888753 4567888888888996665554332 4599999 78
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 041829 459 LTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 459 ~~t~~di~~~~~~l~~~~~~ 478 (486)
..+.++++.|++-+++..++
T Consensus 343 a~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 343 AVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred CCCHHHHHHHHHHHHHHHHh
Confidence 88999999999999887653
No 274
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.70 E-value=3.1e-14 Score=141.63 Aligned_cols=286 Identities=14% Similarity=0.074 Sum_probs=182.0
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
++...+.++ +++.++.+++ +.++|+|+++++..++.+..+ +++.|+++..++..+...
T Consensus 65 ~~~~~lr~~----ia~~~~~~~~-------~I~it~G~~~al~~~~~~~~~-----------~gd~V~v~~P~y~~~~~~ 122 (357)
T PRK14809 65 ASHADLTAA----LADRWDVSPE-------QVWLANGGDGALDYLARAMLD-----------PGDTVLVPDPGFAYYGMS 122 (357)
T ss_pred CCHHHHHHH----HHHHhCCCcc-------eEEECCCHHHHHHHHHHHhcC-----------CCCEEEEeCCChHHHHHH
Confidence 344556666 6666777665 688999999988766654433 677888898888877788
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEee
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVD 269 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD 269 (486)
++..|. .++.+|++.++++.+|.+++++.+. . +.+|+++.++|+||.+-+.+++.++++.. ++++++|
T Consensus 123 ~~~~g~---~~~~~~l~~~~~~~~~~~~~~~~~~-~------~k~i~l~~p~NPTG~~~s~~~~~~l~~~~~~~~~iI~D 192 (357)
T PRK14809 123 ARYHHG---EVREYPVSKADDFEQTADTVLDAYD-G------ERIVYLTSPHNPTGSEIPLDEVEALAERTDEETLVVVD 192 (357)
T ss_pred HHHcCC---eEEEEecccCcCCCcCHHHHHHhhc-C------CcEEEEeCCCCCCCcCCCHHHHHHHHHhCccCcEEEEe
Confidence 888899 8999998754457888888777642 1 34788889999999998887777776654 7899999
Q ss_pred ccccchhccCccchhcccCCcCC-C-ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEEA-D-SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~a-D-s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
.+|+.+.. .+..... ++.. . .+..++.|.++.| ..+|+++..+ +.+........++
T Consensus 193 e~y~~~~~-~~~~~~~---~~~~~~vi~~~SfSK~~~~~GlRiG~~~~~~-~~~~~~~~~~~~~---------------- 251 (357)
T PRK14809 193 EAYGEFAE-RPSAVAL---VEERDDVAVLRTFSKAYGLAGLRLGYAVVPE-EWADAYARVNTPF---------------- 251 (357)
T ss_pred chhhhccC-CchhHHH---HhhCCCEEEEecchhHhcCcchhheeeecCH-HHHHHHHHhCCCC----------------
Confidence 99986532 1111111 1111 2 3345788999744 5688887654 3333221111111
Q ss_pred CccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
....+..++++..+. .+.+++..+...+..+++.+.|... .+ ++..+.+.+++.. .
T Consensus 252 -------~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----~~-~~~g~f~~~~~~~-----------~ 308 (357)
T PRK14809 252 -------AASELACRAGLAALDDDEHVERTVETARWAREYIREELDAP----TW-ESAGNFVLAEVGD-----------A 308 (357)
T ss_pred -------CCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHhcCc----cC-CCCCCEEEEECCC-----------H
Confidence 012333444444443 3445566666666677777777543 12 4455555555521 1
Q ss_pred HHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.++.+.+.+.|..+..+..+....++|+++ . +.+++++++++|+++.+
T Consensus 309 ~~~~~~l~~~gv~v~~g~~f~~~~~iRls~-~---~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 309 SAVAEAAQERGVIVRDCTSFGLPECIRITC-G---TREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHHCCEEEEECccCCCCCeEEEec-C---CHHHHHHHHHHHHHHhc
Confidence 456677777774444443443346899998 3 46899999999987653
No 275
>PRK08637 hypothetical protein; Provisional
Probab=99.69 E-value=3e-14 Score=143.23 Aligned_cols=339 Identities=12% Similarity=0.044 Sum_probs=193.0
Q ss_pred CCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcC-CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHH
Q 041829 87 SSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLK-LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKAL 165 (486)
Q Consensus 87 ~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~ 165 (486)
+.....+.+.+..........|....+..++.+.+.+++.+..+ .... .....++|+|+++++..++.+..+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~----~~~~I~it~G~~~al~~~~~~l~~--- 91 (388)
T PRK08637 19 PMYLSSLQDLLNDLTPDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGK----KMSLPIVTNALTHGLSLVADLFVD--- 91 (388)
T ss_pred cchHHHHHHHHHhhccccccCCCCCCCCHHHHHHHHHHHhccCcccccc----ccceeeEccchHHHHHHHHHHhcC---
Confidence 33344444444432223334555556667787777766665432 2211 001468999999888766654433
Q ss_pred HHhCccCCCCeEEEecCCCchhHHHHH-HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 166 KRVGKNSLEKLVVYASDQTHSALQKAC-QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 166 ~~~~~~~~~~~~v~~s~~~H~s~~~a~-~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
+++.|+++..++..+...+ ...|. +++.+|++.+ ++.+|+++|+++++..... ...+++.+.++|
T Consensus 92 --------~gd~Vlv~~P~y~~~~~~~~~~~g~---~vv~v~~~~~-~~~~d~~~l~~~~~~~~~~--~~~~~~~~~P~N 157 (388)
T PRK08637 92 --------QGDTVLLPDHNWGNYKLTFNTRRGA---EIVTYPIFDE-DGGFDTDALKEALQAAYNK--GKVIVILNFPNN 157 (388)
T ss_pred --------CCCEEEEcCCCCccHHHHHHHhcCC---EEEEecccCC-CCcCCHHHHHHHHHhhccC--CCEEEEEeCCCC
Confidence 6778999999998888875 46788 9999998422 2478999999988732111 124577777999
Q ss_pred cccccC---ChHHHHHHHHH-----hCCEEEeeccccchhccCccchhccc---CC-cCCCcee-eecccccCCC-Ccce
Q 041829 245 SSTAVD---PLLALGNIAKS-----NGMWFHVDAAYAGSACICPEYRQYID---GV-EEADSFN-MNAHKWFLTN-FDCS 310 (486)
Q Consensus 245 ~tG~id---~l~~I~~ia~~-----~g~~lhvD~A~g~~~~~~~~~~~~~~---~~-~~aDs~~-~~~hK~l~~p-~~~g 310 (486)
|||.+- .+++|+++|++ +++++++|.+|..+............ .. ++.-++. .++.|.++.| .-+|
T Consensus 158 PTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~De~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~~pGlRlG 237 (388)
T PRK08637 158 PTGYTPTEKEATAIVEAIKELADAGTKVVAVVDDAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEFVWGFRVG 237 (388)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEecccchhcccCCccchhhHHHhhcccccceEEEeccccccCCCcccceE
Confidence 999884 46777777775 89999999999865432211111111 11 1221232 2778865544 5599
Q ss_pred EEEEeC----chHHHHHhcCCc-ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHH----HHHHHHHH
Q 041829 311 ALWVKD----RNTLIQSLSTNP-EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQ----GYIRNHIQ 381 (486)
Q Consensus 311 ~l~~r~----~~~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~----~~~~~~~~ 381 (486)
++++.. ...+.+.+.... .+.... .. ....+...++...+....+. +......+
T Consensus 238 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--------------~~---~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~ 300 (388)
T PRK08637 238 FITFGTKAGSSQTVKEALEKKVKGLIRSN--------------IS---NGPHPSQSAVLRALNSPEFDKEKQEKFQILKE 300 (388)
T ss_pred EEEEccccCCcHHHHHHHHHHHHHHhhcc--------------cC---CCCcHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 988753 122222221100 000000 00 01222333333333322332 33334455
Q ss_pred HHHHHHHHHhcC---CCeEEecCCCceEEEE-EecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeeeECCEeEEEEEec
Q 041829 382 LAKHFEGLVAQD---LRFEVVTPRIFSLVCF-RLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTVLSGKYILRFAVG 456 (486)
Q Consensus 382 ~a~~l~~~l~~~---~~~~~~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~~~~~~~lRi~~~ 456 (486)
..+.+.+.|+.. +++.+. +|..+++.+ ++.+ . ...++.+++.+ .| +.+.+ .+..++|++++
T Consensus 301 r~~~~~~~l~~~~~~~~~~~~-~~~~g~~~~~~l~~-------~--~~~~l~~~l~~~~g-v~~~~---~~~~~iRi~~~ 366 (388)
T PRK08637 301 RYEKTKEVLYDGKYDDAWQAY-PFNSGYFMCLKLKG-------V--DAEELRVHLLEKYG-IGTIA---LNETDLRIAFS 366 (388)
T ss_pred HHHHHHHHHHhhCCCCCcccc-cccceEEEEecCCh-------H--HHHHHHHHHhhhcc-eEEEe---ccCCceEEEee
Confidence 555666777654 246554 444444443 4421 1 23567777764 46 43332 23468999994
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q 041829 457 APLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 457 ~~~~t~~di~~~~~~l~~~~~~l 479 (486)
. .++++++..++.|.++.+.+
T Consensus 367 ~--~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 367 C--VEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred c--CCHHHHHHHHHHHHHHHHhc
Confidence 3 57899999999998887643
No 276
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.69 E-value=1.7e-14 Score=147.05 Aligned_cols=366 Identities=10% Similarity=0.049 Sum_probs=203.6
Q ss_pred HHHHHHHHHHHhcCcCccccccChh-hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHH-HHHHH
Q 041829 89 VAGFLGEMLSAGLNIVGFSWITSPA-ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAAR-DKALK 166 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~~~~~~-~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~-~~~~~ 166 (486)
++..+.++..+..+. .|....+ ....|..+.+++.+.++..... .+..+.++|+|+++++..++.+.. +..+.
T Consensus 108 ~~~~~~~~~~~~~~~---~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~--~~~~~V~it~Gat~al~~~~~~l~~~~ll~ 182 (521)
T TIGR03801 108 PDAFLYEMCDGIIGD---NYPVPDRMLPHSEKIVHQYLIQEMCGNKPP--PGEFDLFAVEGGTAAMCYIFDSLKANELLK 182 (521)
T ss_pred CCHHHHHHHHHhhcC---CCCCCCCCHHHHHHHHHHHHHhhccCCCCC--CCcCeEEEeCCHHHHHHHHHHHHhHhhcCC
Confidence 345555555554443 3533333 3445555556777765432110 000158999999999888776532 11111
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCC-----CccCHHHHHHHHHHHHhCCCccEEEEEec
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTN-----YSLSPDSLAEAISRDLTIGLIPFFLCATV 241 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~-----~~id~~~L~~~i~~~~~~g~~p~~vv~~~ 241 (486)
+++.|++....+..+...++..|.|. +++.|++++.+. |++|+++|++++++. +.+|+++.
T Consensus 183 -------pGD~Vlv~~P~y~~y~~~~~l~~~g~-~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~------~kai~l~n 248 (521)
T TIGR03801 183 -------KGDKIALMTPIFTPYLEIPELPRYDF-EVVRIKADEMTEDGTHTWQYPDKELEKLRDPS------IKALFVVN 248 (521)
T ss_pred -------CCCEEEEeCCCcHHHHHHHHHhcCCc-EEEEeecccccccccccCCCCHHHHHHhcCCC------CcEEEEeC
Confidence 78889999999999999888875422 777777764333 899999999876543 34788889
Q ss_pred CCccccccCC---hHHHHHHHHHh--CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEe
Q 041829 242 GTTSSTAVDP---LLALGNIAKSN--GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVK 315 (486)
Q Consensus 242 ~~t~tG~id~---l~~I~~ia~~~--g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r 315 (486)
|+||||.+-+ +++|+++|+++ ++|+++|.+|+.+.. .+.........--.++.++.|.++.| .-.|+++..
T Consensus 249 P~NPTG~vls~e~l~~I~~ia~~~~~~l~II~DEvY~~f~~---~~~sl~~~~~~~vI~v~SfSK~fg~~G~RlG~i~~~ 325 (521)
T TIGR03801 249 PSNPPSVAMSDESIEKIVDIVANDRPDLMILTDDVYGTFVD---DFRSLFAELPYNTIGVYSFSKYFGATGWRLGTIALH 325 (521)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEECCCchhhcc---cccchhhhCCCCEEEEEcchhhccCchhhhhhhhcC
Confidence 9999999965 78888899987 999999999986432 22222111111124566789998654 558888776
Q ss_pred CchHHHHHhc-----------CCcccccccccccC-------CccCCCC-CccCCCCCCCc-HHHHHHHHH--hChhhHH
Q 041829 316 DRNTLIQSLS-----------TNPEFLKNKASQAN-------MVVDYKD-WQIPLGRRFRS-LKLWMVLRL--YGLENLQ 373 (486)
Q Consensus 316 ~~~~~~~~~~-----------~~~~yl~~~~~~~~-------~~~~~~~-~~~~~sr~~~~-l~~~~~l~~--~g~~g~~ 373 (486)
+...+.+.+. .+-..+........ ....... .+...+..... .++.++... .+.+..+
T Consensus 326 ~~~v~d~li~~lp~~~~~~l~~ry~~~~~~p~~~~fidr~vadsr~v~~~~~~g~s~p~Q~q~al~a~~all~~~~~y~~ 405 (521)
T TIGR03801 326 KDNIFDKLIAELPEEKKKELDKRYSSLTTEPRKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFALMDKENAYKA 405 (521)
T ss_pred chHHHHHHHHhccHHHHHHHhhhhccccCChhhhhhHHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHHHhccchhHHH
Confidence 5432221111 00011100000000 0000000 00011111000 121112222 2344556
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCeEEe-cCCCceEEEE-EecCCCC--Ccccc------hHHHHHHHHHHHcc-CcEEEEe
Q 041829 374 GYIRNHIQLAKHFEGLVAQDLRFEVV-TPRIFSLVCF-RLLPPHN--DEDHG------NKLNHKLLDDINST-GKIFISH 442 (486)
Q Consensus 374 ~~~~~~~~~a~~l~~~l~~~~~~~~~-~~~~~~~v~f-~~~~~~~--~~~~~------~~~~~~l~~~l~~~-g~~~~~~ 442 (486)
+..+.+.++.+.+.+.| |+.+. .+|.....+| .+..... ...+. .....++..+|.++ |.+++.+
T Consensus 406 ~~~~~~~~R~~~l~~~L----g~~~~~~~~~g~~Y~~~di~~~~~~~~~~~f~~~l~~~~~~~~~~~~L~~e~gV~v~PG 481 (521)
T TIGR03801 406 ETKDICRRREKLLFRGL----GLPLQEDPNDVAYYTLIDLEEWAEKNYGEEFSSYLKKNYSPVDVLFRLAEETGIVLLPG 481 (521)
T ss_pred HHHHHHHHHHHHHHHhc----CCCCcCCCCCeEEEEEeehHHHHHHhcchHHHHHHhccCCHHHHHHHHHHhCCEEEeCc
Confidence 66667777777777777 44332 3455554444 3321110 00000 00124566777765 5444444
Q ss_pred eeECC-EeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 443 TVLSG-KYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 443 ~~~~~-~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
..+.. ..++|+|+++ .+++++.++.++|++++++..++
T Consensus 482 ~~Fg~~~~~vRisla~--l~~~~~~~~~~rl~~~~~~~~~~ 520 (521)
T TIGR03801 482 GGFGGPEWSVRVSLAN--LNEYDYAEIGRAIRKILDEYYEA 520 (521)
T ss_pred hhcCCCCCeEEEEecC--CCHHHHHHHHHHHHHHHHHHHHh
Confidence 44542 4579999943 48899999999999998876654
No 277
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.69 E-value=2.6e-14 Score=144.08 Aligned_cols=163 Identities=12% Similarity=0.085 Sum_probs=114.8
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch------hHHHHH
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS------ALQKAC 192 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a~ 192 (486)
..+.+.+++++|.+. .+++++|+.|+..++.+ .. +++.|++++..|. ++...+
T Consensus 125 ~~le~~lA~l~gae~---------alvv~sg~aAi~l~l~~-l~-----------~GdeVIvs~~e~v~~ggs~~i~~~~ 183 (454)
T TIGR00474 125 SHVEGLLCELTGAED---------ALVVNNNAAAVLLALNT-LA-----------KGKEVIVSRGELVEIGGSFRIPDVM 183 (454)
T ss_pred HHHHHHHHHHhCCCc---------EEEECCHHHHHHHHHHH-hC-----------CcCEEEECCChhhhhcchhhHHHHH
Confidence 444555999999875 56778888888776643 21 5677888887653 344566
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc--cc--ccCChHHHHHHHHHhCCEEEe
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS--ST--AVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~--tG--~id~l~~I~~ia~~~g~~lhv 268 (486)
+..|+ +++.++.+. ..|+++++++|++++ .+|+.++.+|+ .| .+.|+++|+++||++|++++|
T Consensus 184 ~~~G~---~~~~v~~~~----~~~l~dle~aI~~~T------~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~viv 250 (454)
T TIGR00474 184 EQSGA---KLVEVGTTN----RTHLKDYEDAITENT------ALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVME 250 (454)
T ss_pred HHcCC---EEEEeCCCC----CCCHHHHHHhcCcCC------EEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEE
Confidence 77888 888887642 468999999997654 36777777766 46 478999999999999999999
Q ss_pred eccccchhccCcc----chhcc-cCC-cCCCceeeecccccCCCCcceEEEEeCc
Q 041829 269 DAAYAGSACICPE----YRQYI-DGV-EEADSFNMNAHKWFLTNFDCSALWVKDR 317 (486)
Q Consensus 269 D~A~g~~~~~~~~----~~~~~-~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~~ 317 (486)
|++.|... .... ..+.+ ..+ .++|.+++++|||+++|. +|+++.++.
T Consensus 251 D~~sG~l~-~~~~~gl~~~p~~~~~~~~GaDiv~fSg~K~LgGp~-~G~i~g~~~ 303 (454)
T TIGR00474 251 DLGSGSLV-DLSRYGLPDEPTVQEVIAAGVDLVTFSGDKLLGGPQ-AGIIVGKKE 303 (454)
T ss_pred ECCCcccc-cchhccCCCCcccccHhHcCCCEEEecCccccCCCe-EEEEEECHH
Confidence 98754321 0000 00100 111 279999999999999984 788887753
No 278
>PRK05839 hypothetical protein; Provisional
Probab=99.69 E-value=3.7e-14 Score=141.76 Aligned_cols=315 Identities=10% Similarity=0.041 Sum_probs=189.2
Q ss_pred HHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHH-HHHHHhC
Q 041829 91 GFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARD-KALKRVG 169 (486)
Q Consensus 91 ~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~-~~~~~~~ 169 (486)
..+.+.+...... ...|....+..++.+.+.+|+++.+|.+.+ ..+.++|+|+++++..++.+... .
T Consensus 40 ~~~~~a~~~~~~~-~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~-----~~~I~it~G~~~al~~~~~~~~~~~------ 107 (374)
T PRK05839 40 KFIQDALKNNAHL-LNKYPKSAGEESLREAQRGFFKRRFKIELK-----ENELIPTFGTREVLFNFPQFVLFDK------ 107 (374)
T ss_pred HHHHHHHHHHhhc-cCCCCCCCCCHHHHHHHHHHHHHHhCCCCC-----cceEEEecCcHHHHHHHHHHHhcCC------
Confidence 4555555543322 334544456678999999999999885322 12688999888877665544321 1
Q ss_pred ccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 170 KNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 170 ~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
+++.|+++..++..+...++..|+ +++.+|.+.++.|.+|.++.+ ++ .+.+|+++.++||||.+
T Consensus 108 ----~gd~vlv~~P~y~~~~~~~~~~g~---~v~~v~~~~~~~~~~d~~~~~--~~-------~~k~v~i~nP~NPTG~~ 171 (374)
T PRK05839 108 ----QNPTIAYPNPFYQIYEGAAIASRA---KVLLMPLTKENDFTPSLNEKE--LQ-------EVDLVILNSPNNPTGRT 171 (374)
T ss_pred ----CCCEEEECCCCchhhHHHHHhcCC---EEEEeecccccCCcCCcchhh--hc-------cccEEEEeCCCCCcCcc
Confidence 567888899999999999999999 999999986555777765432 21 14577888999999999
Q ss_pred CC---hHHHHHHHHHhCCEEEeeccccchhccCccchhccc-----CCcCC-C-ceeeecccccC-CCCcceEEEEeCch
Q 041829 250 DP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYID-----GVEEA-D-SFNMNAHKWFL-TNFDCSALWVKDRN 318 (486)
Q Consensus 250 d~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~-----~~~~a-D-s~~~~~hK~l~-~p~~~g~l~~r~~~ 318 (486)
-+ +++|+++|+++|+++++|.+|+.+.. .+....... +.... . .++.++.|.++ ...-+|+++.. +.
T Consensus 172 ~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~-~~~~~s~~~~~~~~~~~~~~~vi~~~SfSK~~~~~GlRiG~ii~~-~~ 249 (374)
T PRK05839 172 LSLEELIEWVKLALKHDFILINDECYSEIYE-NTPPPSLLEASILVGNESFKNVLVINSISKRSSAPGLRSGFIAGD-AS 249 (374)
T ss_pred cCHHHHHHHHHHHHHcCCEEEeccchhhccc-CCCCCCHhhhhcccCccccCcEEEEeccccccCCccceeEEEecC-HH
Confidence 44 67888889999999999999986432 111111111 00011 2 44567899754 44568887763 33
Q ss_pred HHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeE
Q 041829 319 TLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFE 397 (486)
Q Consensus 319 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~ 397 (486)
... .+.....++.. +. ..+...++...+ ..+.+++..++..++.+.+.+.| ++.
T Consensus 250 ~~~-~~~~~~~~~~~-----------------~~---~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l----~~~ 304 (374)
T PRK05839 250 ILK-KYKAYRTYLGC-----------------AS---PLPLQKAAAVAWLDDEHAEFFRNIYAKNLKLAREIL----GIT 304 (374)
T ss_pred HHH-HHHHHHhhcCC-----------------CC---ChHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHhc----CCC
Confidence 332 22111111100 00 111111111111 23445555666666666666554 222
Q ss_pred EecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEeee-EC----CEeEEEEEecCCCCCHHHHHHHHHH
Q 041829 398 VVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHTV-LS----GKYILRFAVGAPLTEWRHVNAAWEV 471 (486)
Q Consensus 398 ~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~~-~~----~~~~lRi~~~~~~~t~~di~~~~~~ 471 (486)
.++....+.+++.+ . .++.+++.+ .| +.+.+.. +. +.+++|+++ .. +++++.+.+++
T Consensus 305 --~p~gg~fi~~~~~~-------~----~~~~~~l~~~~g-i~v~pg~~f~~~~~~~~~iRis~-~~--~~~~~~~~l~~ 367 (374)
T PRK05839 305 --IPPATFYVWLPVDN-------D----EEFTKKLYQNEG-IKVLPGSFLGRNGIGKGYVRIAL-VY--DTPKLEKALEI 367 (374)
T ss_pred --CCCeeEEEEEeCCC-------h----HHHHHHHHHHCC-EEEeCchhhCCCCCCCCeEEEEe-cC--CHHHHHHHHHH
Confidence 23333444455431 1 356667765 66 4454442 22 247999999 32 68999999999
Q ss_pred HHHHHH
Q 041829 472 MQDKAS 477 (486)
Q Consensus 472 l~~~~~ 477 (486)
|.++.+
T Consensus 368 l~~~l~ 373 (374)
T PRK05839 368 IKTYLE 373 (374)
T ss_pred HHHHhh
Confidence 987753
No 279
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.69 E-value=8.3e-14 Score=136.48 Aligned_cols=288 Identities=14% Similarity=0.095 Sum_probs=196.6
Q ss_pred hhHHHHHHHHHHHHHHcC-CCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 113 AATELEMIVLDWLAKLLK-LPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g-~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
...++++. +++.+| .+.+ ..++.+|+++.+-..+.+... +++.|+++..++..+...
T Consensus 58 ~~~~l~~a----~a~~~~~~~~~-------~V~~gnGsde~i~~l~~~~~~-----------~gd~vl~~~Ptf~~Y~~~ 115 (356)
T COG0079 58 DYRELRAA----LAEYYGVVDPE-------NVLVGNGSDELIELLVRAFVE-----------PGDTVLIPEPTFSMYEIA 115 (356)
T ss_pred cHHHHHHH----HHHHhCCCCcc-------eEEEcCChHHHHHHHHHHhhc-----------CCCEEEEcCCChHHHHHH
Confidence 34555555 888888 5543 355566666665554444433 667888899999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEee
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVD 269 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD 269 (486)
++..|. +++.||.++ |.+|++++.+++.++ +.+|+++.|+||||..-+.++|.++++.. +.+++||
T Consensus 116 a~~~g~---~~~~v~~~~---~~~d~~~~~~~~~~~------~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvD 183 (356)
T COG0079 116 AQLAGA---EVVKVPLKE---FRLDLDAILAAIRDK------TKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVID 183 (356)
T ss_pred HHhcCC---eEEEecccc---cccCHHHHHHhhhcC------CCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEe
Confidence 999999 999999874 799999999999873 34899999999999998888888887754 7899999
Q ss_pred ccccchhccCccchhcccCCcCCC--ceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 270 AAYAGSACICPEYRQYIDGVEEAD--SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~~~aD--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
+||.-+.- +..-.++. .-+ .+.=++.|.++.+ .-+|+ .+.+++.+....+..++|-.+
T Consensus 184 EAY~eF~~--~~~~~l~~---~~~nlivlRTfSKa~gLAGlRlGy-~ia~~~~i~~l~~vr~p~~v~------------- 244 (356)
T COG0079 184 EAYIEFSP--ESSLELLK---YPPNLIVLRTFSKAFGLAGLRVGY-AIANPELIAALNKVRPPFNVS------------- 244 (356)
T ss_pred CchhhcCC--chhhhhcc---CCCCEEEEEecHHhhhcchhceee-ccCCHHHHHHHHHhcCCCCCC-------------
Confidence 99976543 11111111 122 3444577866544 44777 455555555444445555221
Q ss_pred CccCCCCCCCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLN 425 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~ 425 (486)
.++..++...+- .+.+++.+++..+.++++.+.|++++ +.-+.++..|++.+++.. .. .
T Consensus 245 ----------~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~-~~~v~pS~aNFvlv~~~~--------~~-~ 304 (356)
T COG0079 245 ----------SPALAAAIAALRDADYLEESVERIREERERLYAALKALG-LFGVFPSQANFVLVRVPD--------AE-A 304 (356)
T ss_pred ----------HHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-CCeecCCCCcEEEEECCC--------cc-H
Confidence 223333333322 35678888888999999999999996 553346667888888753 12 3
Q ss_pred HHHHHHHHccCcEEEEeee-ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 426 HKLLDDINSTGKIFISHTV-LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 426 ~~l~~~l~~~g~~~~~~~~-~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
..+.+.|.++|.+.-.... .....++|+++. |+++-++++++|+++..
T Consensus 305 ~~l~~~L~~~giivR~~~~~~~~~~~lRitvg----t~een~~ll~AL~~~~~ 353 (356)
T COG0079 305 AALAEALLKKGILVRDCSSVGLLPGYLRITVG----TPEENDRLLAALREVLK 353 (356)
T ss_pred HHHHHHHHHCCEEEEeCCCCCCCCCeEEEEeC----CHHHHHHHHHHHHHHHh
Confidence 4678888888844333323 123459999993 67777999999988765
No 280
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.69 E-value=4.6e-14 Score=142.06 Aligned_cols=329 Identities=13% Similarity=0.102 Sum_probs=178.1
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVL 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 157 (486)
.++|| +.+.....+.+.+...... ...+ ..+...+++ +.++++.+.+ ..++++|||+||..|+
T Consensus 43 ~~lGh--~~p~v~~a~~~~~~~~~~~-~~~~-~~~~~~~la----~~l~~~~~~~---------~v~~~~sGseA~~~al 105 (389)
T PRK01278 43 NSLGH--AHPHLVEALKEQAEKLWHV-SNLY-RIPEQERLA----ERLVENSFAD---------KVFFTNSGAEAVECAI 105 (389)
T ss_pred ccCCC--CCHHHHHHHHHHHHhcCcc-cccc-CChHHHHHH----HHHHhhCCCC---------EEEEcCCcHHHHHHHH
Confidence 36666 3344444555544431111 1111 234344444 4477776533 3899999999999999
Q ss_pred HHHHHHHHHHhCccCC-CC-eEEEecCCCchhHHHHHHHhCCCCCCeEE---EeCCCCCCCc----cCHHHHHHHHHHHH
Q 041829 158 LAARDKALKRVGKNSL-EK-LVVYASDQTHSALQKACQIGGIHPQNFRV---LKTDSSTNYS----LSPDSLAEAISRDL 228 (486)
Q Consensus 158 ~~a~~~~~~~~~~~~~-~~-~~v~~s~~~H~s~~~a~~~~g~g~~~v~~---v~~~~~~~~~----id~~~L~~~i~~~~ 228 (486)
.++|..... .|. .+ .+|......|-+..-+....+. .... .|..+ ++. .|+++|+++++++
T Consensus 106 ~~ar~~~~~----~G~~~r~~vi~~~~~yhg~~~~~~~~~~~---~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~- 175 (389)
T PRK01278 106 KTARRYHYG----KGHPERYRIITFEGAFHGRTLATIAAGGQ---EKYLEGFGPLVP--GFDQVPFGDIEALKAAITPN- 175 (389)
T ss_pred HHHHHHHHh----cCCCCCCEEEEECCCcCCCcHHHHhccCC---hhhcccCCCCCC--CceEeCCCCHHHHHHhhCCC-
Confidence 999864322 111 22 3444444456554444333332 1111 11111 122 5899999988642
Q ss_pred hCCCccEEEEEecCCcccccc----CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccC
Q 041829 229 TIGLIPFFLCATVGTTSSTAV----DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFL 304 (486)
Q Consensus 229 ~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~ 304 (486)
+.+|+++...+++|.+ +.+++|.++|++||+++++|++|.++.....-+.....++ ..|.++ ..|.++
T Consensus 176 -----~~avivep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~-~pdi~t--~sK~l~ 247 (389)
T PRK01278 176 -----TAAILIEPIQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGV-TPDIMA--VAKGIG 247 (389)
T ss_pred -----eEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCC-CCCEEE--Eehhcc
Confidence 4577777777777743 4799999999999999999999986432111011001122 246554 468887
Q ss_pred CCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHH
Q 041829 305 TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAK 384 (486)
Q Consensus 305 ~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~ 384 (486)
..+..|+++.+++ +.+.+.....+ .+. ++.+....++.++++.+-.+ +..++..++.+
T Consensus 248 ~G~~ig~~~~~~~--~~~~~~~~~~~----------------~t~-~~~~~~~aaa~a~l~~l~~~---~~~~~~~~~~~ 305 (389)
T PRK01278 248 GGFPLGACLATEE--AAKGMTPGTHG----------------STY-GGNPLAMAVGNAVLDVILAP---GFLDNVQRMGL 305 (389)
T ss_pred CCcceEEEEEcHH--HHhccCCCCCC----------------CCC-CccHHHHHHHHHHHHHHhhh---HHHHHHHHHHH
Confidence 5566888877653 22222110000 000 11112222333445544222 23345555666
Q ss_pred HHHHHHhc----CCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCC
Q 041829 385 HFEGLVAQ----DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLT 460 (486)
Q Consensus 385 ~l~~~l~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~ 460 (486)
++++.|++ .+++-....+...++.+.+.. ...++.++|.++|. .+.+. +..++|+++ +...
T Consensus 306 ~l~~~l~~l~~~~~~~~~~v~g~G~~~~i~~~~----------~~~~~~~~l~~~GV-~~~p~---~~~~lR~~p-~~~~ 370 (389)
T PRK01278 306 YLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVV----------PNRDLVQALRDEGL-LTVGA---GDNVVRLLP-PLII 370 (389)
T ss_pred HHHHHHHHHHhhCCCceeeEecccEEEEEEEec----------CHHHHHHHHHHCCe-EEeec---CCCEEEEeC-Cccc
Confidence 66666554 332211112222333444421 12567788888874 44332 346899998 5567
Q ss_pred CHHHHHHHHHHHHHHHHH
Q 041829 461 EWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 461 t~~di~~~~~~l~~~~~~ 478 (486)
++++|++++++|++++++
T Consensus 371 ~~~~i~~~l~~l~~~l~~ 388 (389)
T PRK01278 371 TEEEIDEALERLERAAES 388 (389)
T ss_pred CHHHHHHHHHHHHHHHHh
Confidence 999999999999887654
No 281
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.68 E-value=3.8e-14 Score=143.99 Aligned_cols=340 Identities=11% Similarity=0.047 Sum_probs=189.7
Q ss_pred HHHHHHHHHHhcCcC-----ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHH
Q 041829 90 AGFLGEMLSAGLNIV-----GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKA 164 (486)
Q Consensus 90 ~~~~~~~l~~~~n~~-----~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~ 164 (486)
...+.+.+...++.. ...|....+..++.+.+.+|+.+.+|.+.+ ..+.++|+|+++++..++.+..+..
T Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~-----~~~I~it~Ga~~al~~~~~~l~~~~ 121 (416)
T PRK09440 47 EDYFRDLLADLLASGKLTEALGNYDGPQGKDELIEALAALLNERYGWNIS-----PQNIALTNGSQSAFFYLFNLFAGRR 121 (416)
T ss_pred HHHHHHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHhCCCCC-----hhhEEEccChHHHHHHHHHHHhccc
Confidence 445566665555432 134555556789999999999988876432 1268899999888776665433200
Q ss_pred HHHhCccCCCCeEEEe-cCCCchhHHHHHHHhCC-CCCCeEEEeCCCCC-CCccCHHHHHHHHHHHHhCCCccEEEEEec
Q 041829 165 LKRVGKNSLEKLVVYA-SDQTHSALQKACQIGGI-HPQNFRVLKTDSST-NYSLSPDSLAEAISRDLTIGLIPFFLCATV 241 (486)
Q Consensus 165 ~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~~g~-g~~~v~~v~~~~~~-~~~id~~~L~~~i~~~~~~g~~p~~vv~~~ 241 (486)
...+++.|++ ...+++.+...+...|. ....+..++++.++ ++.+|+++|+ +.+ .+.+++++.
T Consensus 122 ------~~~~gd~v~i~~~P~y~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~------~~~~i~l~~ 187 (416)
T PRK09440 122 ------ADGSLKKILFPLAPEYIGYADAGLEEDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDE------DTGAICVSR 187 (416)
T ss_pred ------cCCCCCeEEEecCCCchhhHHHhhccCceeecccccccccccccccCCCHHHcc--cCC------CceEEEEec
Confidence 0003556777 57787777766554332 00022334444321 3689999997 221 245788899
Q ss_pred CCccccccCC---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCch
Q 041829 242 GTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRN 318 (486)
Q Consensus 242 ~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~ 318 (486)
++||||.+-+ +++|+++|+++++|+++|.+|+-... ...+.........--.+..++.|++....-+|+++. ++.
T Consensus 188 P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~-~~~~~~~~~~~~~~vI~~~SfSK~~~pGlRiG~~i~-~~~ 265 (416)
T PRK09440 188 PTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPPFP-GIIFSEATPLWNPNIILCMSLSKLGLPGVRCGIVIA-DEE 265 (416)
T ss_pred CCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCccccCC-CcchhhcCccccCCeEEEecccccCCCcceEEEEeC-CHH
Confidence 9999999955 78889999999999999999963211 000111000001111445678997544455887765 333
Q ss_pred HHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHH----H-HHHHHHHHHHHHHHHHhcC
Q 041829 319 TLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQ----G-YIRNHIQLAKHFEGLVAQD 393 (486)
Q Consensus 319 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~----~-~~~~~~~~a~~l~~~l~~~ 393 (486)
.+. .+.....+. +.....+...++.+.+....+. + +.+...++.+.+.+.|++.
T Consensus 266 l~~-~~~~~~~~~--------------------~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~r~~~~~~~L~~~ 324 (416)
T PRK09440 266 IIE-ALSNMNGII--------------------SLAPGRLGPAIAAEMIESGDLLRLSETVIRPFYRQKVQLAIALLRRY 324 (416)
T ss_pred HHH-HHHHHHHHh--------------------ccCCCcHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 332 221111100 0011223344444443222222 2 2333444555566666542
Q ss_pred -C--CeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC-C--------EeEEEEEecCCCCC
Q 041829 394 -L--RFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS-G--------KYILRFAVGAPLTE 461 (486)
Q Consensus 394 -~--~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~--------~~~lRi~~~~~~~t 461 (486)
+ ++++..+.....+.+.+.... .+ ..++.+.+.+.|.....+..+. + ..++|+++ +. +
T Consensus 325 l~~~~~~~~~p~gg~fiw~~~~~~~-----~~--~~~~~~~l~~~gV~v~pg~~F~~~~~~~~~~~~~~iRis~-~~--~ 394 (416)
T PRK09440 325 LPDEPCLIHKPEGAIFLWLWFKDLP-----IT--TEELYQRLKARGVLVVPGHYFFPGLDEDWPHAHQCIRMNY-VQ--D 394 (416)
T ss_pred cccCCeEEecCCCceEEEEECCCCC-----CC--HHHHHHHHHHCCEEEechHhhCCCCccccCCcCceEEEEe-cC--C
Confidence 2 355443333445555554211 11 1456666767774444333331 1 24899999 32 6
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q 041829 462 WRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 462 ~~di~~~~~~l~~~~~~l~~ 481 (486)
++++++++++|.++.++...
T Consensus 395 ~~~l~~~i~~l~~~~~~~~~ 414 (416)
T PRK09440 395 DEEIEKGIAILAEEVEKAYA 414 (416)
T ss_pred HHHHHHHHHHHHHHHHHHhh
Confidence 89999999999998876543
No 282
>PLN02624 ornithine-delta-aminotransferase
Probab=99.68 E-value=2.5e-13 Score=139.18 Aligned_cols=306 Identities=14% Similarity=0.062 Sum_probs=174.6
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++.+.|++++|.+. .+|+++|++||..|+..||.......+....+..+|.....-|-...-+..+.+-.
T Consensus 120 ~~la~~L~~~~~~~~---------~~f~~SGseA~e~AlklAr~~~~~~~g~~~~~~~ii~~~~~yHG~t~~~~s~~~~~ 190 (474)
T PLN02624 120 PEFAEYLTSMFGYDM---------VLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCFHGRTLAAISMSCDN 190 (474)
T ss_pred HHHHHHHHhhcCCCe---------EEEeCChHHHHHHHHHHHHHHHHhhcCCCCCCcEEEEECCCcCCCCHHHhhcCCCc
Confidence 334444788887543 79999999999999999987422211100001223333333454433333322210
Q ss_pred ---------CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCE
Q 041829 199 ---------PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMW 265 (486)
Q Consensus 199 ---------~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~ 265 (486)
...+..+|. -|++.|++.++. .+..+.+|++....+++|.+-| +++|.++|++||++
T Consensus 191 ~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~---~~~~iaaiiiEpv~~~~G~v~p~~~~L~~l~~lc~~~gil 260 (474)
T PLN02624 191 EATRGFGPLLPGHLKVDF-------GDLDALEKIFEE---DGDRIAAFLFEPIQGEAGVVIPPDGYLKAVRELCSKHNVL 260 (474)
T ss_pred cccccCCCCCCCceEeCC-------CCHHHHHHHHHh---CCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 011223332 278999988863 2234678888888999999877 99999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDY 344 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 344 (486)
+++|++|.|+.....-+.....++ ..|.++++ |.++.+ ..+|.++.++ +.. ..+.. ...
T Consensus 261 lI~DEv~tG~GrtG~~~a~~~~~i-~pDiv~ls--K~lggG~~pigav~~~~-~i~-~~~~~--~~~------------- 320 (474)
T PLN02624 261 MIADEIQTGLARTGKMLACDWEEV-RPDVVILG--KALGGGVIPVSAVLADK-DVM-LCIKP--GEH------------- 320 (474)
T ss_pred EEEeccccCcCcCcchhhHHhcCC-CCCEEEec--ccccCCCCcceeeeecH-HHH-hHhcc--CCc-------------
Confidence 999999986422111111111223 46888874 888766 4678877754 222 22210 000
Q ss_pred CCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCceEEEEEecCCCCCcc
Q 041829 345 KDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLR-FEVVTPRIFSLVCFRLLPPHNDED 419 (486)
Q Consensus 345 ~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~-~~~~~~~~~~~v~f~~~~~~~~~~ 419 (486)
.+..++.+.....+-++++.+..+ ++.++..++.++|++.|++ .|. +.-+ .+...++.+.+.....
T Consensus 321 --~~T~~g~pl~~aaa~aaLe~l~~~---~l~~~~~~~~~~l~~~L~~l~~~~~~~i~~v-rg~G~~~~i~l~~~~~--- 391 (474)
T PLN02624 321 --GSTFGGNPLASAVAMAALQVVQDE---KLAERSAKLGQELRDQLQKIQKQFPKLIKEV-RGRGLLNAVVLNSPKL--- 391 (474)
T ss_pred --CCCCCCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHHhCCCceEEE-EeeEEEEEEEecCCCc---
Confidence 000012222223334444444332 2444556666777766655 332 2212 2233344444432110
Q ss_pred cchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 420 HGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 420 ~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
......++.+.|.+.| +++.+. +..++|+++ +..+|++||+++++.|+++.+.
T Consensus 392 -~~~~a~~~~~~L~e~G-V~v~p~---~~~~lR~~p-~l~~t~e~id~~l~~L~~~l~~ 444 (474)
T PLN02624 392 -GPVSAYDVCLKLKERG-LLAKPT---HDTIIRLAP-PLSISEDELQECSKALSDVLEH 444 (474)
T ss_pred -ChHHHHHHHHHHHhCC-eEEecC---CCCEEEEEC-CccCCHHHHHHHHHHHHHHHHH
Confidence 0233467788888888 555443 346899998 7789999999999999988765
No 283
>PRK07049 methionine gamma-lyase; Validated
Probab=99.67 E-value=6.9e-14 Score=141.28 Aligned_cols=225 Identities=14% Similarity=0.115 Sum_probs=158.9
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++.|.+. .++++||+.|+..++.+..+ +++.|+++...+..+.
T Consensus 81 ~~Pt~~~Le~~----lA~leg~~~---------~iv~~sG~~Ai~~~l~al~~-----------~Gd~Vv~~~p~Y~~~~ 136 (427)
T PRK07049 81 NHPNSEIVEDR----LAVYEGAES---------AALFSSGMSAIATTLLAFVR-----------PGDVILHSQPLYGGTE 136 (427)
T ss_pred CCcCHHHHHHH----HHHHhCCCc---------EEEEccHHHHHHHHHHHHhC-----------CCCEEEEcCCCcccHH
Confidence 45777788888 888888543 78899999887776665443 6778888888887765
Q ss_pred HH----HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH----
Q 041829 190 KA----CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS---- 261 (486)
Q Consensus 190 ~a----~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~---- 261 (486)
.. +..+|+ +++.++ + ..|+++|++++++..++ .++.+|+++.++|++|.+-|+++|.++|++
T Consensus 137 ~~~~~~l~~~Gi---~~v~~~-~-----~~d~~~l~~~l~~~~~~-~~tklv~lesP~NPtg~v~d~~~l~~la~~~~~~ 206 (427)
T PRK07049 137 TLLAKTFRNFGV---GAVGFA-D-----GLSEAAIGAAAEAAAAK-GRVSLILIETPANPTNSLVDVAAVRRVADAIEAR 206 (427)
T ss_pred HHHHHHHHhcCc---EEEEEe-C-----CCCHHHHHHHHHhhccC-CCceEEEEECCCCCCCcccCHHHHHHHHHHhhhc
Confidence 54 345677 766665 1 35788898888654322 235689999999999999999999999988
Q ss_pred --hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC--cceEEEEeCchHHHHHhcCCcccccccccc
Q 041829 262 --NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF--DCSALWVKDRNTLIQSLSTNPEFLKNKASQ 337 (486)
Q Consensus 262 --~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~--~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~ 337 (486)
++++++||.+|.+.....+ . -.++|.+..+..|++++.. -+|+++ .+++... .+.....
T Consensus 207 ~~~~~~vvvDety~~~~~~~p----l---~~g~divv~S~SK~~gG~~glr~G~vv-~~~~l~~-~l~~~~~-------- 269 (427)
T PRK07049 207 QGHRPIIACDNTLLGPVFQKP----L---EHGADLSVYSLTKYVGGHSDLVAGAVL-GRKALIR-QVRALRS-------- 269 (427)
T ss_pred ccCCCEEEEECCccccccCCc----c---ccCCCEEEEcCceeecCCCCcEEEEEE-CCHHHHH-HHHHHHH--------
Confidence 8999999999876533211 1 1168999999999998532 356554 4444322 2211000
Q ss_pred cCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 338 ANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 338 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
..+.....+..|++++.+ +.+..++++..++++.+.+.|+++|+++-+
T Consensus 270 ------------~~g~~ls~~~a~l~~r~L--~tl~~R~~~~~~~a~~la~~L~~~p~V~~v 317 (427)
T PRK07049 270 ------------AIGTQLDPHSCWMLGRSL--ETLVLRMERANRNARAVAEFLRDHPKVEKL 317 (427)
T ss_pred ------------hcCCCCCHHHHHHHHcCC--ChHHHHHHHHHHHHHHHHHHHHhCCCccEE
Confidence 112223455777777654 567888899999999999999999998644
No 284
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.67 E-value=2.4e-13 Score=137.34 Aligned_cols=300 Identities=13% Similarity=0.130 Sum_probs=172.2
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC---
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG--- 196 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g--- 196 (486)
++.+.|+++++.+ ..++++||++||..|+..+|....+..+ ..++.+|......|-+...+....|
T Consensus 86 ~l~~~l~~~~~~~---------~~~~~~sGseA~e~a~klar~~~~~~~~--~~~~~ii~~~~~~HG~~~~~~~~~~~~~ 154 (403)
T PRK05093 86 RLAKKLIDATFAE---------RVFFANSGAEANEAAFKLARRYACDRHG--PEKTEIIAFHNSFHGRTLFTVSVGGQPK 154 (403)
T ss_pred HHHHHHHhhCCCC---------EEEEeCchHHHHHHHHHHHHHHHhhcCC--CCCCeEEEEcCCcCCchhhhHhhcCChh
Confidence 4444477777643 2799999999999999998875321100 1134556667777877665444322
Q ss_pred ----CCC--CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEE
Q 041829 197 ----IHP--QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWF 266 (486)
Q Consensus 197 ----~g~--~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~l 266 (486)
.+. ..++.+|. -|++.+++.+.+. +.+|++...++..|.+.| +++|.++|++||+++
T Consensus 155 ~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~------~aaiiiep~~~~gg~~~~~~~~l~~l~~l~~~~g~~l 221 (403)
T PRK05093 155 YSDGFGPKPADITHVPF-------NDLAAVKAVIDDH------TCAVVVEPIQGEGGVIPATPEFLQGLRELCDQHNALL 221 (403)
T ss_pred hhhcCCCCCCCcEEeCC-------CCHHHHHHHhcCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEE
Confidence 110 12333322 2889998888532 456777744444454433 999999999999999
Q ss_pred EeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCC
Q 041829 267 HVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKD 346 (486)
Q Consensus 267 hvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~ 346 (486)
++|.+|.++......+.....++ ..|..+ .-|.++.....|+++.++. +.+.+... .. .
T Consensus 222 I~DEv~~g~g~~g~~~~~~~~~~-~pdi~s--~sK~l~~G~rig~vv~~~~--i~~~l~~~---~~-------------~ 280 (403)
T PRK05093 222 IFDEVQTGMGRTGDLFAYMHYGV-TPDILT--SAKALGGGFPIGAMLTTAE--IASHFKVG---TH-------------G 280 (403)
T ss_pred EEechhhCCCCCccchhhhhcCC-CCCEEE--ecccccCCcceEEEEEcHH--HHhhcCCC---CC-------------C
Confidence 99999986432111010001112 245544 4599875566888887642 22222110 00 0
Q ss_pred CccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEec-CC-CceEEEEEecCCCCCcccchH
Q 041829 347 WQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVT-PR-IFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 347 ~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~-~~-~~~~v~f~~~~~~~~~~~~~~ 423 (486)
.+. ++.+.....+..+++.+-. .++.++..++.+++.+.|+++. .+.++. .+ ...++.+.+.+. ...
T Consensus 281 ~t~-~~~~~~~~aa~a~L~~~~~---~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~~~~~G~~~~~~l~~~------~~~ 350 (403)
T PRK05093 281 STY-GGNPLACAVAEAVFDIINT---PEVLEGVKARRQRFVDGLQKINQKYGVFSEIRGMGLLIGAELKPQ------YKG 350 (403)
T ss_pred CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeEeEeeCceEEEEEecCc------chh
Confidence 010 1111122233343444321 2455677778888888887751 111111 11 223344454321 112
Q ss_pred HHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 424 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
...++...+.++| +++.+ .+..++|+++ +...++++|++++++|.++..++
T Consensus 351 ~~~~~~~~l~~~G-v~v~~---~g~~~lRl~~-~~~~~~~~i~~~~~~l~~~l~~~ 401 (403)
T PRK05093 351 RARDFLNAAAEEG-VMVLV---AGPDVLRFAP-SLVIEEADIDEGLARFEKAVAKV 401 (403)
T ss_pred HHHHHHHHHHHCC-eEEec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 3467888888888 44443 2346899988 66779999999999999988654
No 285
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.67 E-value=1e-13 Score=136.62 Aligned_cols=277 Identities=12% Similarity=0.119 Sum_probs=174.2
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
++...+++. +++.+|.+++ +.++|+|+++++...+... +++.|+++...|..+...
T Consensus 55 ~g~~~lr~~----ia~~~~~~~~-------~I~~t~G~~~~l~~~~~~~-------------~gd~V~v~~P~y~~~~~~ 110 (337)
T PRK03967 55 ITSDPLREA----IAEFYGLDAE-------NIAVGNGSDELISYLVKLF-------------EGKHIVITPPTFGMYSFY 110 (337)
T ss_pred CCHHHHHHH----HHHHhCcCcc-------eEEEcCCHHHHHHHHHHHh-------------CCCeEEEeCCChHHHHHH
Confidence 455666666 6666777664 5889999988765443221 356688888899888888
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
++..|+ +++.+|++. +|.+|++.|++++. . ..+++++.++|+||.+-+.++|.++++ +++++++|++
T Consensus 111 ~~~~g~---~~~~v~~~~--~~~~d~~~l~~~~~-~------~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~ 177 (337)
T PRK03967 111 AKLNGI---PVIDVPLKE--DFTIDGERIAEKAK-N------ASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEA 177 (337)
T ss_pred HHHcCC---eEEEeecCC--CCCcCHHHHHHhcc-C------CCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECc
Confidence 899999 999999874 36899999987642 1 235677899999999999999999995 6999999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
|..+.. ..........+. -.+..++.|.++.| .-+|+++.. +..+.........+
T Consensus 178 y~~~~~--~~~~~~~~~~~~-vi~l~S~SK~~~l~GlRiG~iv~~-~~~i~~~~~~~~~~-------------------- 233 (337)
T PRK03967 178 YAEFSG--KSLIGLIDEYPN-LILLRTFSKAFGLAGIRAGYAIAN-EEIIDALYRIKPPF-------------------- 233 (337)
T ss_pred hhhhcc--cchHHHHhhCCC-EEEEecchHhhcchhhhheeeecC-HHHHHHHHhhcCCC--------------------
Confidence 976431 111111111111 24567789999844 568888764 33332221111111
Q ss_pred CCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLL 429 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~ 429 (486)
....+...++...+ ..+.+.+..++..+.++.+.+.|.+. ..++..+.+++.+ .+.
T Consensus 234 ---~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-----~~~~~~~~~~~~~---------------~~~ 290 (337)
T PRK03967 234 ---SLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY-----AYPSDANFLLLKL---------------DAY 290 (337)
T ss_pred ---CCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-----cCCCCCcEEEEhH---------------HHH
Confidence 01122333333222 23345555566666677777777654 1233333333322 145
Q ss_pred HHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 430 DDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+.|.++| +.+.+......+++|+++. +.++.++++++|+++.+
T Consensus 291 ~~l~~~g-i~v~~~~~~~~~~~Ri~~~----~~~~~~~l~~~l~~~~~ 333 (337)
T PRK03967 291 DYLLENG-IVVRKLSGRLEGHIRVTVG----KREENDEFIKALKEIKE 333 (337)
T ss_pred HHHHHCC-EEEEeCCCCCCCeEEEecC----CHHHHHHHHHHHHHHHH
Confidence 6677777 5554332223458999983 56888899999877654
No 286
>PLN02397 aspartate transaminase
Probab=99.66 E-value=2.2e-13 Score=138.22 Aligned_cols=323 Identities=12% Similarity=0.062 Sum_probs=193.9
Q ss_pred HHHHHHHHhcCcC-ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCe--EEcCch--hHHHHHHHHHHHHHHHH
Q 041829 92 FLGEMLSAGLNIV-GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGG--VIQGTA--SEAVLVVLLAARDKALK 166 (486)
Q Consensus 92 ~~~~~l~~~~n~~-~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~--~~t~gg--t~a~~~al~~a~~~~~~ 166 (486)
.+.+.+...++.+ ...|....+..++.+.+.+|+.+..+.+... ... .-+.+| +.+...++....+
T Consensus 70 ~~~~a~~~~~~~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~-----~~i~~~~i~~g~Ga~~l~~~~~~~~~---- 140 (423)
T PLN02397 70 VVRKAEQRLLAGSRNKEYLPIEGLAEFNKLSAKLAYGADSPAIKE-----NRVATVQCLSGTGSLRLGAEFLARFY---- 140 (423)
T ss_pred HHHHHHHHhhccCCCCCCCCcCCCHHHHHHHHHHHcCCCCchhhc-----CeeEeeecccchHHHHHHHHHHHHhC----
Confidence 4444443333322 3357777889999999888875443221100 011 112233 3333333333222
Q ss_pred HhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc
Q 041829 167 RVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS 246 (486)
Q Consensus 167 ~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t 246 (486)
+++.|++++.++..+...++..|. +++.+|....+++.+|++.+++.+++.. .+..+++.+.++|||
T Consensus 141 -------pGd~Vlv~~P~y~~y~~~~~~~g~---~~~~v~l~~~~~~~~d~~~l~~~l~~~~---~~~~~i~~~~P~NPT 207 (423)
T PLN02397 141 -------PGSTIYIPNPTWGNHHNIFRDAGV---PVRTYRYYDPKTRGLDFDGLLEDLKAAP---DGSFVLLHACAHNPT 207 (423)
T ss_pred -------CCCEEEEeCCCchhHHHHHHHcCC---eEEEeecccCcCCccCHHHHHHHHHhCC---CCCEEEEeCCCCCCC
Confidence 677899999999999999999999 9999998432247999999998886431 124678888899999
Q ss_pred cccC---ChHHHHHHHHHhCCEEEeeccccchhccCc--cchhc--ccCCcCCC-ceeeecccccCC-CCcceEEE--Ee
Q 041829 247 TAVD---PLLALGNIAKSNGMWFHVDAAYAGSACICP--EYRQY--IDGVEEAD-SFNMNAHKWFLT-NFDCSALW--VK 315 (486)
Q Consensus 247 G~id---~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~--~~~~~--~~~~~~aD-s~~~~~hK~l~~-p~~~g~l~--~r 315 (486)
|.+- .+++|+++|++||+|+++|.+|..+..... ..... +... .-. .++.++.|.++. ..-+|+++ ..
T Consensus 208 G~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l~~~~~~~~~~~~~~~~~~-~~~vI~~~SfSK~~~~~G~RvG~~v~~~~ 286 (423)
T PLN02397 208 GVDPTPEQWEQISDLIKSKNHLPFFDSAYQGFASGDLDADAQSVRMFVED-GHEILVAQSYAKNMGLYGERVGALSVVCK 286 (423)
T ss_pred CCCCCHHHHHHHHHHHHhCCcEEEEecccCCccCCchhhhhHHHHHHHhc-CCcEEEEEECcccCCCccccceEEEEEeC
Confidence 9994 577889999999999999999987653110 01111 1111 112 345578999985 45688875 33
Q ss_pred CchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhCh--------hhHHHHHHHHHHHHHHHH
Q 041829 316 DRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGL--------ENLQGYIRNHIQLAKHFE 387 (486)
Q Consensus 316 ~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~--------~g~~~~~~~~~~~a~~l~ 387 (486)
++..+......-..+.... ..+ ...+..+++...+.. +.++++.++..++++.+.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~--------------~~~---~~~~~q~~~~~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~ 349 (423)
T PLN02397 287 SADVAVRVKSQLKLIARPM--------------YSN---PPIHGASIVATILGDPELFSEWTKELKGMADRIISMRQKLY 349 (423)
T ss_pred CHHHHHHHHHHHHHHHhcc--------------cCC---CcHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4332221110000000000 000 012233333333321 125677778889999999
Q ss_pred HHHhcCCC----eEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHH
Q 041829 388 GLVAQDLR----FEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWR 463 (486)
Q Consensus 388 ~~l~~~~~----~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~ 463 (486)
+.|+++ + ++++ .|+.+++.|--.+ ..+.++|.++..+++.+ . + |+++++ .+++
T Consensus 350 ~~L~~~-~~~~~~~~~-~p~gg~fl~~~l~------------~~~~~~Ll~~~~V~v~~---~--~--Ri~~~~--~~~~ 406 (423)
T PLN02397 350 DALEAR-GSPGDWSHI-TKQIGMFSFTGLN------------KEQVDRMTKEYHIYMTR---D--G--RISMAG--LSSK 406 (423)
T ss_pred HHHHhc-CCCCCCCcc-cCCceEEEecCCC------------HHHHHHHHHhCCEEECC---C--C--eEEEee--CCHH
Confidence 999987 5 6544 4566666553211 23666776665566542 1 1 999832 5899
Q ss_pred HHHHHHHHHHHHHH
Q 041829 464 HVNAAWEVMQDKAS 477 (486)
Q Consensus 464 di~~~~~~l~~~~~ 477 (486)
++++++++|+++.+
T Consensus 407 ~i~~~~~~i~~~~~ 420 (423)
T PLN02397 407 NVPYLADAIHAVVT 420 (423)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999998864
No 287
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=1.5e-13 Score=138.78 Aligned_cols=303 Identities=14% Similarity=0.139 Sum_probs=171.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+...++.++++++.|.+ ..++++||++|+..|+.+++....+ .+..+..|+ .....|.....+..
T Consensus 80 ~~~~~~la~~l~~~~~~~---------~v~~~~gg~eA~~~al~~a~~~~~~----~~~~~~~ii~~~~~yhg~~~~~~~ 146 (396)
T PRK02627 80 IEPQEELAEKLVELSGMD---------KVFFCNSGAEANEAAIKLARKYGHK----KGIEKPEIITAENSFHGRTLATLS 146 (396)
T ss_pred CHHHHHHHHHHHhhcCCC---------EEEECCCcHHHHHHHHHHHHHHhcc----cCCCCCeEEEECCCcCcccHHHHH
Confidence 456666777788888764 3899999999999999988764211 011123344 44444644443333
Q ss_pred HhCCCCCCeEEEeCCCCCCC----ccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc----CChHHHHHHHHHhCCE
Q 041829 194 IGGIHPQNFRVLKTDSSTNY----SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV----DPLLALGNIAKSNGMW 265 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~----~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~ia~~~g~~ 265 (486)
..+.........|... ++ ..|+++|++++.+ ++.+|+++...+++|.. +.+++|.++|++||++
T Consensus 147 ~~~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~i~~------~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~ 218 (396)
T PRK02627 147 ATGQPKYQEGFEPLVE--GFIYVPFNDIEALKAAITD------KTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGIL 218 (396)
T ss_pred hcCCccccccCCCCCC--CceEeCCCCHHHHHHhcCC------CeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 3332000001112111 11 2289999998843 24577777777788843 3489999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|++|.++......+.....++ ..|.+++ -|.++.....|+++.++. +.+.+... .+. .
T Consensus 219 lI~DE~~~g~g~~g~~~~~~~~~~-~pdi~t~--sK~~~~G~rig~~~~~~~--~~~~~~~~-~~~-------------~ 279 (396)
T PRK02627 219 LILDEVQTGMGRTGKLFAYQHYGI-EPDIMTL--AKGLGGGVPIGAVLAKEK--VADVFTPG-DHG-------------S 279 (396)
T ss_pred EEEechhcCCCccCceeeehhcCC-CCCEEEE--cchhhCCcccEEEEEcHH--HHhccCCC-CCC-------------C
Confidence 999999986432111010001122 2465554 598886667888887643 22222110 000 0
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEecCCCCCcccc
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLLPPHNDEDHG 421 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~ 421 (486)
+ -++.......+..+++.+.. ++..++..++.+++++.|.+ .|.+..+ .....++.+.+..
T Consensus 280 --t-~~~~~~~~~aa~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~g~~~~i~~~~-------- 344 (396)
T PRK02627 280 --T-FGGNPLACAAALAVIEIIEE---EGLLENAAEVGEYLRAKLRELLEKYPGIKEV-RGLGLMIGIELDR-------- 344 (396)
T ss_pred --C-CCCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeeee-ccCcEEEEEEecC--------
Confidence 0 01111222233334443322 23445555566666665544 3333222 2333455666521
Q ss_pred hHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 422 NKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 422 ~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
...++.+++.++| +++.+. +..++|+++ +...+++++++++++|+++.+++
T Consensus 345 --~~~~~~~~l~~~G-v~v~~~---~~~~lRi~~-~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 345 --PAAEIVKKALEKG-LLINVT---GDNVLRLLP-PLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred --cHHHHHHHHHHCC-eEEeec---CCCEEEEEC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 1256788888887 455443 235799998 66779999999999999887654
No 288
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.66 E-value=9.2e-14 Score=139.31 Aligned_cols=298 Identities=11% Similarity=0.060 Sum_probs=171.2
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+++.++.+++++..+.+ ..++++||++||..|+..++... + ++.+|......|-+...+..
T Consensus 69 ~~~~~~~la~~l~~~~~~~---------~~~~~~sG~~a~~~A~~~a~~~~-------g-~~~vi~~~~~~Hg~~~~~~~ 131 (377)
T PRK02936 69 TNSLQEEVASLLAENSAGD---------LVFFCNSGAEANEAALKLARKHT-------G-KSKIVTFEQSFHGRTFGTMS 131 (377)
T ss_pred CCHHHHHHHHHHHhcCCCC---------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCCcHHhhh
Confidence 3567788777788876643 37999999999999999877531 0 23355555666766665555
Q ss_pred HhCCCCCCeEEEeCCCCCCC--ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEE
Q 041829 194 IGGIHPQNFRVLKTDSSTNY--SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFH 267 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~--~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lh 267 (486)
..+.....-...|..++-.+ .-|+++|++.+.+. +.+|++....++.|.+.+ +++|.++|++||++++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~------~~~ii~e~i~~~~G~~~~~~~~l~~l~~l~~~~~~~lI 205 (377)
T PRK02936 132 ATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEE------VAAVMLEVVQGEGGVIPADPAFLQEVQTLCKKFGALLI 205 (377)
T ss_pred ccCCccccccCCCCCCCceEeCCCCHHHHHHhccCC------eEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEE
Confidence 44321000001111111000 11789999888543 357777777777776643 9999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCC
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDW 347 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~ 347 (486)
+|++|.++......+.....++ ..|.++ ..|.++.....|+++.+. . +...+.... + ..
T Consensus 206 ~DEv~~g~g~~g~~~~~~~~~~-~~di~t--~sK~l~~G~~ig~v~~~~-~-~~~~~~~~~-~---------------~~ 264 (377)
T PRK02936 206 IDEVQTGIGRTGTLFAYEQFGL-DPDIVT--VAKGLGNGIPVGAMIGKK-E-LGTAFGPGS-H---------------GS 264 (377)
T ss_pred EeccccCCCcCchhhHHHhhCC-CCcEEE--EcccccCCCccEEEEEcH-H-HHhhccCCC-C---------------CC
Confidence 9999976422111011001122 246554 579998555678776653 2 332221100 0 00
Q ss_pred ccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEecCCCCCcccchH
Q 041829 348 QIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNK 423 (486)
Q Consensus 348 ~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~ 423 (486)
+. ++.++...++.++++.+. .++++++..++.+++++.|++ ++.+..+ .+...++.+.+.. +
T Consensus 265 t~-~~~~~~~aaa~a~l~~~~---~~~~~~~~~~~~~~l~~~L~~~~~~~~~~~~v-~~~g~~~~i~~~~--------~- 330 (377)
T PRK02936 265 TF-GGNPLAMAAAKEVLQVIK---QPSFLEEVQEKGEYFLQKLQEELEHLECVKNI-RGKGLMIGIECTE--------E- 330 (377)
T ss_pred CC-CCCHHHHHHHHHHHHHHH---hccHHHHHHHHHHHHHHHHHHHHhhCCcEEeE-eecceEEEEEecc--------h-
Confidence 00 111222233334444331 124455666677777776665 3333222 1233455556542 1
Q ss_pred HHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 424 LNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 424 ~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
...+.+.|.++|.+ +.+ .+..++|+++ +...++++|++++++|+++
T Consensus 331 -~~~~~~~l~~~gv~-v~~---~g~~~lRi~p-~~~~~~~~i~~~i~~l~~~ 376 (377)
T PRK02936 331 -VAPVIEQLREEGLL-VLS---AGPNVIRLLP-PLVVTKEELDQAVYLLKKV 376 (377)
T ss_pred -HHHHHHHHHHCCeE-Eec---CCCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 35677778788844 433 2346899997 6678999999999999765
No 289
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.65 E-value=3.9e-14 Score=129.86 Aligned_cols=315 Identities=18% Similarity=0.145 Sum_probs=215.5
Q ss_pred ChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHH-HHHHHHHHHhCccCCCCeEEEecCCC-c---
Q 041829 111 SPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLL-AARDKALKRVGKNSLEKLVVYASDQT-H--- 185 (486)
Q Consensus 111 ~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~-~a~~~~~~~~~~~~~~~~~v~~s~~~-H--- 185 (486)
.+....+-+.+.+.++.++|.... +.+++.+ |..|+.-+. ++.... .+..|++++.. .
T Consensus 71 ~~~W~~lp~~lgdklApLiGA~~~-------Evvv~dt-ts~nl~k~L~aalr~~---------~~r~vIv~E~~~fpTd 133 (407)
T COG3844 71 KADWFDLPERLGDKLAPLIGARAG-------EVVVTDT-TSINLFKVLAAALRPQ---------EGRRVIVSEGDNFPTD 133 (407)
T ss_pred CCchhhchhHHHHHhhhhhcCCCC-------ceEEeCC-cchHHHHHHHHHhccC---------CCceEEeecCCCCCcc
Confidence 344566777888889999999775 4666665 445555444 333221 23345555443 3
Q ss_pred -hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 186 -SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 186 -~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
|.....+.++|.|. ++ .+.+.|+++++++.+++. +|.++..+.-||..-++.+|..+++++|+
T Consensus 134 ly~a~g~~~~~~~~~-~~---------~~~~~P~~~~~~~~dd~A------vV~L~~V~y~TGql~dm~aiT~~AH~~ga 197 (407)
T COG3844 134 LYIAEGLADLLGIGY-DL---------EGVIAPRALEEAITDDVA------VVLLSHVNYKTGQLLDMRAITALAHQHGA 197 (407)
T ss_pred hhhhcchhhhhcccc-cc---------eeeeChHHHHHhhccceE------EEEeccccccccceeeHHHHHHHHHhcCc
Confidence 34556777777742 11 136788899999998864 78899999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccC-CCCcceEEEEeCchHHHHHhcCCccccccccccc-CCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQA-NMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~-~~~~ 342 (486)
.+.-|=||+.+.+..+-+.. ++|+.++..||+|+ +|.+.+++++.++. .........+|+.+...-. ...+
T Consensus 198 lv~wDLAHsaGavp~~Lh~~------gaDfaigcsyKYLNgGPGapa~l~v~~~h-~e~~~~~lsgW~gha~pf~m~~~y 270 (407)
T COG3844 198 LVGWDLAHSAGAVPVDLHAA------GADFAIGCSYKYLNGGPGAPAGLFVAPRH-RERSWPPLSGWWGHARPFAMEEVY 270 (407)
T ss_pred eEEeehhcccCCcceeeccc------CCCeeeeeeceeccCCCCCceeEEecccc-ccccccccccccCCCCcchhhhcc
Confidence 99999999998876654432 89999999999996 56667888886653 2223333445554321000 0000
Q ss_pred CC--CCCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCC----CceEEEEEe
Q 041829 343 DY--KDWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL---RFEVVTPR----IFSLVCFRL 411 (486)
Q Consensus 343 ~~--~~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~---~~~~~~~~----~~~~v~f~~ 411 (486)
.. +-..+.+|.. ....++-.+|..+..-++.++.++...++.+|.+.++..- ++++..|. ..+.|+|..
T Consensus 271 ~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~~~~l~l~tPr~~~~rGsqvS~~h 350 (407)
T COG3844 271 APGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCEYYGLTLVTPRAHEERGSQVSLYH 350 (407)
T ss_pred CcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHHHHHHHHHHhccccCCcEEeccchhhhccceeeEec
Confidence 00 0011122222 1223555667777788899999999999999999998742 57777542 356788877
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+. ..++.+.|.++|.+ ..+....++|+.++-.+++-+||=..+++|+++.+.+.
T Consensus 351 p~-----------~~~V~qaLi~rGVi----gD~R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~a 404 (407)
T COG3844 351 PH-----------GYQVMQALIDRGVI----GDFREPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTLA 404 (407)
T ss_pred Cc-----------HHHHHHHHHHcCcc----ccccCCCeeeecCccceechhHHHHHHHHHHHHHHhhc
Confidence 52 25678888888843 23444569999997779999999999999999887654
No 290
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.65 E-value=1.3e-13 Score=134.63 Aligned_cols=287 Identities=18% Similarity=0.200 Sum_probs=194.2
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
..|....+|+. ++++=|... ++.+++|..|+..++.+... +++.|+++...+....
T Consensus 61 ~nPT~~~lE~~----~a~LEg~~~---------~~afsSGmaAI~~~~l~ll~-----------~GD~vl~~~~~YG~t~ 116 (396)
T COG0626 61 GNPTRDALEEA----LAELEGGED---------AFAFSSGMAAISTALLALLK-----------AGDHVLLPDDLYGGTY 116 (396)
T ss_pred CCccHHHHHHH----HHHhhCCCc---------EEEecCcHHHHHHHHHHhcC-----------CCCEEEecCCccchHH
Confidence 57888889988 788777654 78888887777666554333 5788888877765544
Q ss_pred H----HHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHH-HHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 190 K----ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISR-DLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 190 ~----a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~-~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
. ..+.+|+ ++..++. .|.+++++++.+ . +.+|.+..|+|++..+.||++|+++|+++|+
T Consensus 117 ~~~~~~l~~~gi---~~~~~d~-------~~~~~~~~~~~~~~------tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~ 180 (396)
T COG0626 117 RLFEKILQKFGV---EVTFVDP-------GDDEALEAAIKEPN------TKLVFLETPSNPLLEVPDIPAIARLAKAYGA 180 (396)
T ss_pred HHHHHHHHhcCe---EEEEECC-------CChHHHHHHhcccC------ceEEEEeCCCCcccccccHHHHHHHHHhcCC
Confidence 3 4445677 7776653 255566666654 3 4589999999999999999999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCcc
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
.++||.+|+...+.-| +. -+||++.-+.-|++++-.. .|+++.+++......+...-.+
T Consensus 181 ~vvVDNTfatP~~q~P-L~------~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~------------ 241 (396)
T COG0626 181 LVVVDNTFATPVLQRP-LE------LGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRAN------------ 241 (396)
T ss_pred EEEEECCcccccccCh-hh------cCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhh------------
Confidence 9999999988765422 11 1799999999999987654 5545445544332211111011
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC-----------------Cce
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR-----------------IFS 405 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~-----------------~~~ 405 (486)
.|.-....-+|..++ |.+-+.-+++++.++|..+.++|+++|.++-+.-| ..+
T Consensus 242 --------~G~~l~p~dA~l~lR--GlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg 311 (396)
T COG0626 242 --------TGAVLSPFDAWLLLR--GLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGG 311 (396)
T ss_pred --------cCCCCCHHHHHHHHh--ccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCce
Confidence 222334557788877 67888899999999999999999999998754322 346
Q ss_pred EEEEEecCCCCCcccchHHHHHHHHHHHcc------CcE---EEEee--eE----------C--CEeEEEEEecCCCCCH
Q 041829 406 LVCFRLLPPHNDEDHGNKLNHKLLDDINST------GKI---FISHT--VL----------S--GKYILRFAVGAPLTEW 462 (486)
Q Consensus 406 ~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~------g~~---~~~~~--~~----------~--~~~~lRi~~~~~~~t~ 462 (486)
+++|.+.. . +...++.+.|.-- |.+ ...+. .. . ..+.+|+++ --
T Consensus 312 ~~Sf~l~~-------~-~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSV-----Gl 378 (396)
T COG0626 312 LFSFELKN-------E-EAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSV-----GL 378 (396)
T ss_pred EEEEEeCC-------h-HHHHHHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEe-----cC
Confidence 88999874 1 3345566654321 111 11110 00 0 136899999 34
Q ss_pred HHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASA 478 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~ 478 (486)
||++.+++.|++..+.
T Consensus 379 Ed~eDLi~Dl~~Al~~ 394 (396)
T COG0626 379 EDVEDLIADLEQALAK 394 (396)
T ss_pred CCHHHHHHHHHHHHHh
Confidence 6778888888776654
No 291
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.64 E-value=1e-14 Score=139.10 Aligned_cols=338 Identities=14% Similarity=0.120 Sum_probs=209.4
Q ss_pred CCCcccccCCCCCCHHHHHHHHHHHh-cCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHH-
Q 041829 75 QSPNYFAYYPSNSSVAGFLGEMLSAG-LNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEA- 152 (486)
Q Consensus 75 ~~p~~~~~~~~~~~~~~~~~~~l~~~-~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a- 152 (486)
.+=+|+||--+...-.....+.+..+ ++......+ -+..++-+++.+.+|+++|.++. ++.+-|-.+
T Consensus 142 gSYNYLGFa~~~g~ca~~~~~~~~kygl~~css~~e--~G~~~~hkelE~l~A~f~g~e~a---------~vF~mGf~TN 210 (519)
T KOG1357|consen 142 GSYNYLGFAQSVGPCAEASLKSFDKYGLSRCSSRHE--AGTTEEHKELEELVARFLGVEDA---------IVFSMGFATN 210 (519)
T ss_pred cccccccccccCCcCChHHHHHHHHhcccccccchh--cccHHHHHHHHHHHHHhcCCcce---------EEEecccccc
Confidence 34568887644332233333333332 222222222 23345555555669999999874 222222222
Q ss_pred --HHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC
Q 041829 153 --VLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI 230 (486)
Q Consensus 153 --~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~ 230 (486)
|+.+++ . ++..|+.++..|-|+...|++.|. .++....+ |+.+||+.|++....
T Consensus 211 s~~~p~l~---~-----------~gsLIiSDelNHaSi~~GaRLSgA---tiRVfkHN-------dm~~LEr~Lrd~I~~ 266 (519)
T KOG1357|consen 211 SMNIPSLL---G-----------KGSLIISDELNHASLITGARLSGA---TTRVFRHN-------DMQGLERLLRDAIVY 266 (519)
T ss_pred ccCcceee---c-----------CCcceeeccccchheeccccccCc---eEEEEecC-------CHHHHHHHHHHHHhc
Confidence 333332 1 677788888999999999999999 88887743 889999999988755
Q ss_pred C-------CccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc-----CccchhcccCCcCCCceeee
Q 041829 231 G-------LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI-----CPEYRQYIDGVEEADSFNMN 298 (486)
Q Consensus 231 g-------~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~-----~~~~~~~~~~~~~aDs~~~~ 298 (486)
| ++.++|++..-.++-|.|++++++.+++|+|.++++.|+||..+++- +.++. -.+-+.+|.+-..
T Consensus 267 gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~--g~d~~dvDImMGt 344 (519)
T KOG1357|consen 267 GQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYF--GVDPEDVDIMMGT 344 (519)
T ss_pred CCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeecc--CCCchhheeecce
Confidence 4 33356777777889999999999999999999999999999877652 11111 1122368888888
Q ss_pred cccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHH-h---ChhhHHH
Q 041829 299 AHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRL-Y---GLENLQG 374 (486)
Q Consensus 299 ~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~-~---g~~g~~~ 374 (486)
+-|.+++ +|..+..++. +.+.+....++..-.. ..+.+ -+-....+++. . |.+.-++
T Consensus 345 ftKSfga---~GGyiagsk~-lid~lrt~s~~~~yat--------------~~spp-vaqq~~ssl~~i~G~dgt~~g~~ 405 (519)
T KOG1357|consen 345 FTKSFGA---AGGYIAGSKE-LIDYLRTPSPSALYAT--------------SLSPP-VAQQILTSVKHIMGEDGTNRGRQ 405 (519)
T ss_pred ehhhccc---ccceecCcHH-HHhhhccCCCceeecc--------------cCChH-HHHHHHHHHHhhcCCCcccHHHH
Confidence 8888764 3444444443 3333333322221110 11111 11122223333 2 4667788
Q ss_pred HHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeee---ECCEeEE
Q 041829 375 YIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTV---LSGKYIL 451 (486)
Q Consensus 375 ~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~---~~~~~~l 451 (486)
.+++..++.++++..+++. +|.+.+....+++..-+.+.. +. ..+...|.+....++.... .--....
T Consensus 406 k~~~l~~ns~yfr~~l~~~-gfivyG~~dSpVvplll~~~~----k~----~~f~r~~l~~nigvVvvgfPatpl~e~r~ 476 (519)
T KOG1357|consen 406 KIERLAENSRYFRWELQKM-GFIVYGNNDSPVVPLLLYGPA----KI----VAFSREMLERNIGVVVVGFPATPLLESRA 476 (519)
T ss_pred HHHHHHhhhHHHHHhhhcC-cEEEecCCCCCcceeeecCcc----cc----cHHHHHHHhcCceEEEEeCCCchHHHhHH
Confidence 9999999999999999997 899988766666655544321 12 2334445554433332221 1112467
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
|+|. +..++.|+++++++.+.++.+.
T Consensus 477 R~c~-Sa~ht~e~ld~~l~~i~~~g~~ 502 (519)
T KOG1357|consen 477 RFCL-SASHTKEDLDRALEVIDRVGDE 502 (519)
T ss_pred Hhhh-cccccHHHHHHHHHHHhhhchh
Confidence 8998 7888999999999999988754
No 292
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.64 E-value=2e-13 Score=136.86 Aligned_cols=308 Identities=13% Similarity=0.056 Sum_probs=184.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+.+.++.+++++..+.+ ..+|++|||+||..|+..+|....+ +.. .++.+|......|-+...++.
T Consensus 76 ~~~~~~~la~~l~~~~~~~---------~v~f~~SGseA~e~Aik~ar~~~~~--~~~-~r~~ii~~~~~yHG~t~~~~~ 143 (395)
T PRK03715 76 YNEPMAKLAGLLTQHSCFD---------KVFFANSGAEANEGAIKLARKWGRK--HKN-GAYEIITFDHSFHGRTLATMS 143 (395)
T ss_pred cCHHHHHHHHHHhhccCCC---------EEEEeCCcHHHHHHHHHHHHHHhhc--cCC-CCcEEEEECCCcCCChHHHHh
Confidence 3567777777777765433 3799999999999999999864211 000 123456666677888877777
Q ss_pred HhCCCCCCeEEEeCCCCCCC----ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCE
Q 041829 194 IGGIHPQNFRVLKTDSSTNY----SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMW 265 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~~~----~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~ 265 (486)
..|...-.....|..+ .+ ..|+++|++.+.+. ..+|++.......|.+-| +++|.++|++||++
T Consensus 144 ~s~~~~~~~~~~~~~~--~~~~~~~~d~~~l~~~l~~~------~aavi~Epv~~~gG~~~~~~~~l~~l~~l~~~~~~l 215 (395)
T PRK03715 144 ASGKPGWDTIFAPQVP--GFPKAELNDIASVEKLITDK------TVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLL 215 (395)
T ss_pred hcCCcccccCCCCCCC--CceeeCCchHHHHHHHcCCC------ceEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 6654110111111111 01 24788898888532 457888888888888877 99999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|+++.|+.-...-+.....++ ..|.++++ |.++..++.|.++.+++- . .+ ...+...
T Consensus 216 lI~DEv~tG~GRtG~~~a~~~~gv-~PDi~t~g--K~lg~G~p~~av~~~~~i--~-~~--~~~~~~~------------ 275 (395)
T PRK03715 216 LIVDEVQTGCGRTGTLFAYELSGI-EPDIMTLG--KGIGGGVPLAALLAKAEV--A-VF--EAGDQGG------------ 275 (395)
T ss_pred EEEeccccCCCCCcchhhHhhcCC-CCceeeeh--hhhhCCcceEEEEEcccc--c-cc--cCCCcCC------------
Confidence 999999986422111111111133 47887774 888776778888876642 1 11 0111000
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCceEEEEEecCCCCCcccch
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD---LRFEVVTPRIFSLVCFRLLPPHNDEDHGN 422 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~---~~~~~~~~~~~~~v~f~~~~~~~~~~~~~ 422 (486)
+. .+.+.....+.++++.+.. .+++++..++.++|++.|+++ .++.-+ .....++.+.+... ..
T Consensus 276 --T~-~g~pl~~aaala~L~~l~~---~~l~~~~~~~g~~l~~~L~~l~~~~~i~~v-rG~Glm~~i~l~~~------~~ 342 (395)
T PRK03715 276 --TY-NGNPLMTAVGVAVISQLLA---PGFLEGVRARGEYLKEKLLELSEERGLEGE-RGEGLLRALLLGKD------IG 342 (395)
T ss_pred --CC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHhhcCCcCeE-EcceeEEEEEecCc------hH
Confidence 11 1222233344555555532 346677888888888888753 123222 12344556665421 01
Q ss_pred HHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 423 KLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 423 ~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
....+...++.++| +++.+. +...+|++. ....|++||+.++++|+++.+++
T Consensus 343 ~~~~~~~~~~~~~G-i~~~~~---~~~~lR~~p-~l~~t~~ei~~~~~~l~~~l~~~ 394 (395)
T PRK03715 343 PQIVEKARDMQPDG-LLLNAP---RPNLLRFMP-ALNVTTEEIDQMIAMLRSVLDKL 394 (395)
T ss_pred HHHHHHHHhccCCC-EEEeec---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 11112223333447 444322 225899999 88999999999999999988754
No 293
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.64 E-value=2.8e-13 Score=136.77 Aligned_cols=303 Identities=14% Similarity=0.085 Sum_probs=174.6
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCC
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHP 199 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~ 199 (486)
++.+.++++++.+ ..++++|||+||..|+..||.....+ +.. .+..++......|-+..-+....|...
T Consensus 85 ~la~~l~~~~~~~---------~v~~~~sGseA~e~Alk~ar~~~~~~-~~~-~r~~ii~~~~~yHG~t~~~~~~~~~~~ 153 (406)
T PRK12381 85 RLAKKLIDATFAD---------RVFFCNSGAEANEAALKLARKYAHDR-YGS-HKSGIVAFKNAFHGRTLFTVSAGGQPK 153 (406)
T ss_pred HHHHHHHhhCCCC---------eEEEcCCcHHHHHHHHHHHHHHHhhc-CCC-CCCeEEEECCCcCCcchhHHhhcCCcc
Confidence 3444477777643 38999999999999999998653211 000 023344445556766554444443210
Q ss_pred ---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc-----cCChHHHHHHHHHhCCE
Q 041829 200 ---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA-----VDPLLALGNIAKSNGMW 265 (486)
Q Consensus 200 ---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~-----id~l~~I~~ia~~~g~~ 265 (486)
..+..+| .-|+++|++.+.+. +.+|++. |.+++|. .+.+++|.++|++||++
T Consensus 154 ~~~~~~~~~~~~~~~~-------~~d~~~l~~~l~~~------~aaviiE-Pv~~~gg~~~~~~~~l~~l~~l~~~~~~l 219 (406)
T PRK12381 154 YSQDFAPLPPDIRHAA-------YNDLNSASALIDDQ------TCAVIVE-PIQGEGGVIPADKAFLQGLRELCDRHNAL 219 (406)
T ss_pred cccCCCCCCCCeeEeC-------CCCHHHHHHhccCC------eeEEEEe-CCcCCCCCcCCCHHHHHHHHHHHHHcCCE
Confidence 0122222 23789999888532 3456665 4444443 25689999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|.+|.|+.....-+.....++ ..|.+++ -|.++..+..|+++.++. +.+.+... ...
T Consensus 220 lI~DEv~tG~gr~G~~~~~~~~~v-~pDi~t~--sK~l~gG~~ig~~~~~~~--~~~~~~~~---~~~------------ 279 (406)
T PRK12381 220 LIFDEVQTGVGRTGELYAYMHYGV-TPDVLTT--AKALGGGFPIGAMLTTEK--CASVMTVG---THG------------ 279 (406)
T ss_pred EEEcchhhCCCCCcchhhhHhhCC-CCCEEEe--hhhhhCCCceEEEEEcHH--HHhhcCCC---CCC------------
Confidence 999999966432211111111122 3566544 599876667888887643 22222210 000
Q ss_pred CCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCC--CceEEEEEecCCCCCcccch
Q 041829 346 DWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTPR--IFSLVCFRLLPPHNDEDHGN 422 (486)
Q Consensus 346 ~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~~--~~~~v~f~~~~~~~~~~~~~ 422 (486)
.+. .+.+.....+.++++.+.. .++.++..++.++|.+.|+++. ++.++..+ ...++.+.+.+. ..
T Consensus 280 -~t~-~~~pl~~aaa~a~l~~l~~---~~~~~~~~~~~~~l~~~L~~l~~~~~~~~~vrg~Gl~~~~~l~~~------~~ 348 (406)
T PRK12381 280 -TTY-GGNPLASAVAGKVLELINT---PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLGLLIGCVLNAE------YA 348 (406)
T ss_pred -CCC-CCCHHHHHHHHHHHHHHhh---ccHHHHHHHHHHHHHHHHHHHHhhCCCEEEEecCeEEEEEEecCc------hh
Confidence 011 1222233344444544422 2466777888888888887751 12222111 123344444321 11
Q ss_pred HHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 423 KLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 423 ~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
.....+.+.+.++|.+ +.+. +..++|+++ +...|++||++++++|+++++++.++.
T Consensus 349 ~~~~~~~~~l~~~Gv~-v~~~---g~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~~~~~ 404 (406)
T PRK12381 349 GKAKQISQEAAKAGVM-VLIA---GPNVVRFAP-ALNISEEEITTGLDRFARACERFVSRG 404 (406)
T ss_pred hHHHHHHHHHHHCCcE-EeeC---CCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 2345677888888854 3322 335899998 667899999999999999998876543
No 294
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.64 E-value=2e-13 Score=134.36 Aligned_cols=278 Identities=12% Similarity=0.081 Sum_probs=178.5
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKA 191 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a 191 (486)
+...++.+.+.+|+.+.. .+++ +.++|+|+++++..++.+. +.|++...++..+..+
T Consensus 56 ~~~~~Lr~aia~~~~~~~-~~~~-------~i~it~Ga~~~i~~~~~~~---------------d~v~v~~P~y~~~~~~ 112 (335)
T PRK14808 56 SPDEELIEKILSYLDTDF-LSKN-------NVSVGNGADEIIYVMMLMF---------------DRSVFFPPTYSCYRIF 112 (335)
T ss_pred CChHHHHHHHHHHhCCCC-CCcc-------eEEEcCCHHHHHHHHHHHh---------------CcEEECCCCHHHHHHH
Confidence 456777777555554432 5554 5899999999887766532 1267788999999999
Q ss_pred HHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 192 CQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 192 ~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
++.+|+ +++.+|.+.+ +.++... +. ...+++++.++||||.+-+.+++.+++ ++++|+++|.+
T Consensus 113 ~~~~g~---~~~~v~~~~~--~~~~~~~----~~-------~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~ 175 (335)
T PRK14808 113 AKAVGA---KFLEVPLTKD--LRIPEVN----VG-------EGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEA 175 (335)
T ss_pred HHHcCC---eEEEecCCCc--CCCChhH----cc-------CCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECc
Confidence 999999 9999998753 4555332 11 124788899999999999999999999 57999999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccC
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
|.-+. .......+...+. -.++.++.|.++.| .-+|+++... +.+.........+-
T Consensus 176 Y~~f~--~~~~~~~~~~~~~-vi~~~S~SK~~~l~GlRvG~~v~~~-~~~~~l~~~~~~~~------------------- 232 (335)
T PRK14808 176 YYEFH--GESYVDLLKKYEN-LAVIRTFSKAFSLAAQRIGYVVSSE-KFIDAYNRVRLPFN------------------- 232 (335)
T ss_pred hhhhc--CCchHHHHHhCCC-EEEEEechhhccCcccceEEEEeCH-HHHHHHHHhcCCCC-------------------
Confidence 97642 1111111111111 24456789999844 5578887653 33332211111110
Q ss_pred CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHH
Q 041829 351 LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLD 430 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~ 430 (486)
.+ ......+..++. ..+.+.+..+...+..+++.+.|++. |+++. ++..+++.+++... + ..++.+
T Consensus 233 ~~-~~~q~a~~~~l~--~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~-~~~g~f~~~~l~~~-------~--~~~~~~ 298 (335)
T PRK14808 233 VS-YVSQMFAKVALD--HREIFEERTKFIVEERERMKSALREM-GYRIT-DSRGNFVFIFMEKE-------E--KERLLE 298 (335)
T ss_pred CC-HHHHHHHHHHHh--CHHHHHHHHHHHHHHHHHHHHHHHHC-CCEEC-CCCCeEEEEeCCCc-------c--HHHHHH
Confidence 00 011112222332 23345666667777788899999987 78765 55667776666421 1 146777
Q ss_pred HHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 431 DINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+|.+.| +.+... . .++|++++ +.++.++++++|++.
T Consensus 299 ~l~~~G-i~V~~~--~--~~~Risi~----~~~~~~~~~~~l~~~ 334 (335)
T PRK14808 299 HLRAKN-IAVRSF--R--EGVRITIG----KREENDMILKELEVF 334 (335)
T ss_pred HHHHCC-eEEEEC--C--CCeEEecC----CHHHHHHHHHHHHhh
Confidence 788888 444432 2 47999983 578999999998753
No 295
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.64 E-value=9.6e-13 Score=133.86 Aligned_cols=315 Identities=13% Similarity=0.089 Sum_probs=189.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
.+...++.+.|++++.-+.+ ..+|++||||||..|+..||.....+ .+..|++ ....|-...-+..
T Consensus 123 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls 189 (459)
T PRK11522 123 DPLRAMLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR------GKFTFIATSGAFHGKSLGALS 189 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCchHHHHHHHHHHHHHhccC------CCcEEEEecCCCCCCcHHHhh
Confidence 34444555557777642222 47999999999999999998753110 1333443 4444644444433
Q ss_pred HhCCCC---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHH
Q 041829 194 IGGIHP---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAK 260 (486)
Q Consensus 194 ~~g~g~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~ 260 (486)
..|-.. ..+..+|. -|.+++++++++..+.+..+.+|++.......|.+-| ++++.++|+
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~~pp~~yl~~lr~lc~ 262 (459)
T PRK11522 190 ATAKSTFRKPFMPLLPGFRHVPF-------GNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVILPPEGYLTAVRKLCD 262 (459)
T ss_pred hcCCcccccCCCCCCCCCcccCC-------CCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCccCCHHHHHHHHHHHH
Confidence 333210 01122221 1788899988764434455678888887888899877 999999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccC
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN 339 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~ 339 (486)
+||+.+++|+++.|+.-...-+.....++ ..|.+++ -|.++.. +++|.++.+++ .. ..+... ++...
T Consensus 263 ~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lggG~~Pigav~~~~~-i~-~~~~~~-~~~~~------ 330 (459)
T PRK11522 263 EFGALLILDEVQTGMGRTGKMFACEHENV-QPDILCL--AKALGGGVMPIGATIATEE-VF-SVLFDN-PFLHT------ 330 (459)
T ss_pred HcCCEEEeccceecCCccchhhhhhccCC-CCCEEEe--chhhhCCCccceeEEEcHH-HH-HHhccC-CcccC------
Confidence 99999999999976422111111111233 4687765 5888765 35788888753 22 222211 11110
Q ss_pred CccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeE-Eec--CCCceEEEEEecCCC
Q 041829 340 MVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFE-VVT--PRIFSLVCFRLLPPH 415 (486)
Q Consensus 340 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~-~~~--~~~~~~v~f~~~~~~ 415 (486)
+.-.+.+....++.++++.+-.+ .+.++..++.++|++.|+++. ++. ++. .....++.+.+..
T Consensus 331 --------~T~~gnp~~~Aaala~L~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~i~~VrG~Gl~~giel~~-- 397 (459)
T PRK11522 331 --------TTFGGNPLACAAALATINVLLEQ---NLPAQAEQKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVD-- 397 (459)
T ss_pred --------CCCCCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHhCCCceeeEEeceeEEEEEecC--
Confidence 00112222334455666666443 356778888888888887641 121 111 1223455566543
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
++....+.+.+.++| +++.+.. .+..++|++. ....|++|||+++++|.++++++.+..
T Consensus 398 ------~~~~~~i~~~l~~~G-vl~~~~~-~~~~~lr~~P-pl~~t~~~id~~l~~l~~~l~~~~~~~ 456 (459)
T PRK11522 398 ------NEIGYNFASEMFRQR-VLVAGTL-NNAKTIRIEP-PLTLTIEQCEQVLKAARKALAAMRVSV 456 (459)
T ss_pred ------chHHHHHHHHHHHCC-eEEEecC-CCCCEEEEEC-CccCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 233456788888888 5554432 2346899998 778899999999999999998876544
No 296
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.63 E-value=3.1e-13 Score=136.59 Aligned_cols=309 Identities=13% Similarity=0.027 Sum_probs=181.7
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS 186 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~ 186 (486)
.|...++...+.+++.+++.+. +.+++ +.++|+|+++++.. +..... +++.|+++..++.
T Consensus 70 ~Y~p~~g~~~lr~aia~~~~~~-~~~~d-------~I~it~Ga~~al~~-l~~l~~-----------~gd~Vlv~~P~y~ 129 (402)
T TIGR03542 70 GYGPEQGYPFLREAIAENDYRG-RIDPE-------EIFISDGAKCDVFR-LQSLFG-----------SDNTVAVQDPVYP 129 (402)
T ss_pred CCCCCCCCHHHHHHHHHHHHhc-CCCHH-------HEEECCCcHHHHHH-HHHhcC-----------CCCEEEEeCCCCc
Confidence 3545567788888866664321 45443 58899988887654 322211 5667888999999
Q ss_pred hHHHHHHHhCC-C-------CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHH
Q 041829 187 ALQKACQIGGI-H-------PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLAL 255 (486)
Q Consensus 187 s~~~a~~~~g~-g-------~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I 255 (486)
.+...++..|+ | ..+++.+|.++.+++..|.+.. ..+.+|+++.++||||.+-+ +++|
T Consensus 130 ~~~~~~~~~g~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-----------~~~~~i~l~nP~NPTG~~~s~~~~~~l 198 (402)
T TIGR03542 130 AYVDSNVMAGRAGVLDDDGRYSKITYLPCTKENNFIPDLPEE-----------PKIDIIYLCSPNNPTGTVLTKEQLKEL 198 (402)
T ss_pred chHHHHHHcCCccccccccccceEEEeecchhhCCCCCcccc-----------CCceEEEEeCCCCCCCccCCHHHHHHH
Confidence 99999998887 1 1156777876544455554210 12457888899999999966 8889
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhcccCCcCC-C--ceeeecccccCCC-CcceEEEEeCchHHHHHh-cCCccc
Q 041829 256 GNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA-D--SFNMNAHKWFLTN-FDCSALWVKDRNTLIQSL-STNPEF 330 (486)
Q Consensus 256 ~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a-D--s~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~-~~~~~y 330 (486)
+++|+++|+++++|.+|..+... +.....+..+... + ..+.++.|.++.| ..+|+++.... .+.... .....+
T Consensus 199 ~~~a~~~~~~iI~De~y~~~~~~-~~~~~~~~~~~~~~~~vi~~~SfSK~~g~pGlRiG~~i~~~~-l~~~~~~~~~~~~ 276 (402)
T TIGR03542 199 VDYANEHGSLILFDAAYSAFISD-PSLPHSIFEIPGAKECAIEFRSFSKTAGFTGVRLGWTVVPKE-LTYADGHSVIQDW 276 (402)
T ss_pred HHHHHHcCeEEEEEchhhhhccC-CCCCcchhhCCCCcccEEEEecCccccCCCCcceEEEEecHH-HhhcchhhHHHHH
Confidence 99999999999999999865421 1111111112221 1 3356788998644 55888877442 220000 000000
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh---ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY---GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLV 407 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~---g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v 407 (486)
..... ........+...++...+ +...+++..+...+..+.+.+.|++. ++++..+...+.+
T Consensus 277 ~~~~~--------------~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~-~~~~~~~~~~~f~ 341 (402)
T TIGR03542 277 ERRQC--------------TKFNGASYPVQRAAEAAYAGEGLQPILEAISYYMENARILRKALEAA-GFKVYGGEHAPYL 341 (402)
T ss_pred HHHhh--------------hcccCCCHHHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHhc-CceecCCCceeEE
Confidence 00000 000001112222222222 12335556666777888899999886 6776544445566
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHc-cCcEEEEee-eEC--CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINS-TGKIFISHT-VLS--GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~-~g~~~~~~~-~~~--~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.+++... .+ ..++.+.+.+ .| +.+.+. .+. +..++|+++ .. +++++++.++.|+++
T Consensus 342 ~v~l~~~------~~--~~~l~~~l~~~~g-v~v~pg~~f~~~~~~~iRis~-~~--~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 342 WVKTPEG------IS--SWDFFDFLLYQYH-VVGTPGSGFGPSGEGFVRFSA-FG--KRENIVEACERIKEA 401 (402)
T ss_pred EEECCCC------CC--HHHHHHHHHHhCC-EEEeCchhhCCCCCCEEEEEe-cC--CHHHHHHHHHHHHhh
Confidence 6676431 11 1456777765 46 444443 332 347999997 32 688899999888764
No 297
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=99.63 E-value=1.3e-13 Score=132.23 Aligned_cols=312 Identities=14% Similarity=0.082 Sum_probs=198.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh-HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS-EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
..+-..++..+-+..|++.. ...++++-+| +++.+++.+.|.+ + ....|+.+...|+|-.+++.
T Consensus 55 ~~ltn~l~~d~~~~~G~~~~------~~~~~vP~atgm~l~l~l~~l~~r--~-------~a~~Viw~ridqkSc~kai~ 119 (389)
T PF05889_consen 55 AKLTNSLVLDALRLAGLRSV------KSCFVVPMATGMSLTLCLLALRMR--P-------KAKYVIWPRIDQKSCFKAIE 119 (389)
T ss_dssp HHHHHHHHHHHHHHTTHTTH------CEEEEESS-HHHHHHHHHHHHHHH--C-------T--EEEEEEEETHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCccc------cceEEEecccccHHHHHHHHHhcc--c-------CCceEEEeeccccchHHHHH
Confidence 44555555566777898753 2367776666 6666677776622 1 34467779999999999999
Q ss_pred HhCCCCCCeEEEeCCCCC-CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-hHHHHHHHHHhCCEEEeecc
Q 041829 194 IGGIHPQNFRVLKTDSST-NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-LLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 194 ~~g~g~~~v~~v~~~~~~-~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-l~~I~~ia~~~g~~lhvD~A 271 (486)
..|+ +++.||....+ ....|.+++++++++. |..+.+++++..+-..|...| +++|++||++||+..+|-+|
T Consensus 120 ~AGl---~~~vV~~~~~~d~l~td~~~ie~~i~~~---G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnA 193 (389)
T PF05889_consen 120 RAGL---EPVVVENVLEGDELITDLEAIEAKIEEL---GADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNA 193 (389)
T ss_dssp HTT----EEEEE-EEEETTEEEEHHHHHHHHHHHH---CGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGT
T ss_pred hcCC---eEEEeeccCCCCeeeccHHHHHHHHHHh---CCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccc
Confidence 9999 99999964322 3567899999998554 445788888888888888855 99999999999999999999
Q ss_pred ccchhccCccchhccc---CCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCc
Q 041829 272 YAGSACICPEYRQYID---GVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQ 348 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~---~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~ 348 (486)
||.-.- ..-+++. ...+.|.+.-+.-|-+.+|.|.+.+...++..+...-. .|-
T Consensus 194 YgvQ~~---~~~~~i~~a~~~GRvda~vqS~dkNF~VPvGgai~As~~~~~i~~vs~---~Yp----------------- 250 (389)
T PF05889_consen 194 YGVQSS---KCMHLIQQAWRVGRVDAFVQSTDKNFMVPVGGAIMASFDPSGILAVSK---EYP----------------- 250 (389)
T ss_dssp TTTT-H---HHHHHHHHHHHHSTCSEEEEEHHHHHCEESSHEEEEESSHHHHHHHHH---TSH-----------------
T ss_pred hhhhHH---HHHHHHHHHHhcCCcceeeeecCCCEEecCCCcEEEecCHHHHHHHHH---Hhh-----------------
Confidence 986211 1111110 12378999999999999999988888887765443211 121
Q ss_pred cCCCCCC--CcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCce-EEEEEecCCCCCcccch
Q 041829 349 IPLGRRF--RSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD---LRFEVVTPRIFS-LVCFRLLPPHNDEDHGN 422 (486)
Q Consensus 349 ~~~sr~~--~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~---~~~~~~~~~~~~-~v~f~~~~~~~~~~~~~ 422 (486)
+|-+ ..+-+...+..+|..|+...+....++-.++.++|++. -+-++...|..+ .+.|....-... ..
T Consensus 251 ---GRas~sp~ld~~itLl~LG~~g~~~ll~~r~~~f~~l~erl~~~aee~~e~ll~~p~N~is~a~tl~~l~~~---~~ 324 (389)
T PF05889_consen 251 ---GRASASPSLDLFITLLSLGCTGYGALLKERKASFPYLKERLKKWAEEVGERLLETPRNHISMAFTLDTLYEI---SQ 324 (389)
T ss_dssp ---SHBTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEBSSSTT-SSEEEEE-TTCCTC---CS
T ss_pred ---hhhhcccchHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCeeEEEECccchhh---cc
Confidence 1111 12456788888999999999999999999998888652 144444444333 334444321110 11
Q ss_pred HHHHHHHHHHHccCcE---EEEeeeECC--------EeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 423 KLNHKLLDDINSTGKI---FISHTVLSG--------KYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 423 ~~~~~l~~~l~~~g~~---~~~~~~~~~--------~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.....|...|..++.. .+.+..... ..+|-++- ....++||||.++++|+++.+
T Consensus 325 k~~~~lgs~Lf~R~VsG~RvV~~~~~~~tsh~~~yp~~Ylt~As-aiG~~~eevd~~v~rL~k~i~ 389 (389)
T PF05889_consen 325 KDGTFLGSMLFKRGVSGIRVVTPGGKKQTSHSSNYPCPYLTAAS-AIGMTREEVDYFVKRLDKIIK 389 (389)
T ss_dssp SHHHHHHHHHHHTTEESSEEEETSSCEEETTSS--SSSEEEEEE--TT--HHHHHHHHHHHHHHHH
T ss_pred chhhhHHHHHHhCCcccceeeccCCCcccccCCCCchHHHHHHH-HhCCCHHHHHHHHHHHHHHhC
Confidence 2224566666666521 122111111 25788755 567899999999999998864
No 298
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.63 E-value=1e-12 Score=133.43 Aligned_cols=320 Identities=13% Similarity=0.053 Sum_probs=178.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++.+.++.+.|++++.-..+ ..+|+++||||+..|+..||.....+ +..+ +..+|......|-...-+...
T Consensus 84 ~~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~A~klar~~~~~~-~~~~-r~~ii~~~~~yHG~t~~~ls~ 154 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLD-------HVFFSDSGSVAVEVALKMALQYWRNR-GEPG-RSRFLSLRGGYHGDTIGTMSV 154 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEEcCCcCCccHHHHhc
Confidence 34455566668888731111 47999999999999999998753211 1111 223344444455443333332
Q ss_pred hCCCC---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEec-CCccccccCC----hHHHHHHHH
Q 041829 195 GGIHP---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATV-GTTSSTAVDP----LLALGNIAK 260 (486)
Q Consensus 195 ~g~g~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~-~~t~tG~id~----l~~I~~ia~ 260 (486)
.+-+. ..+..+|...++....++++|++.+++. +..+.+|++.. .....|.+-| +++|.++|+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~---~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~ 231 (423)
T PRK05964 155 GDRGGMHALYTPLLFEQVTAPFPPDGYEQATLDALEALLEKH---AGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICD 231 (423)
T ss_pred CCCccccccccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhC---CCcEEEEEEecccccCCCcccCCHHHHHHHHHHHH
Confidence 22100 1234444432110122378888887642 22345566554 3455566543 999999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC---ccccccccc
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN---PEFLKNKAS 336 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~---~~yl~~~~~ 336 (486)
+||+++++|+++.|+.....-+.....++ ..|.++++ |+++.+ .++|+++.++ + +.+.+... ..++...
T Consensus 232 ~~g~llI~DEv~tg~gr~G~~~a~~~~~v-~pDi~~~~--K~l~gG~~p~~av~~~~-~-i~~~~~~~~~~~~~~~~~-- 304 (423)
T PRK05964 232 RHGVLLIFDEIATGFGRTGTLFACEQAGV-SPDIMCLS--KGLTGGYLPLAATLCTA-E-IFEAFYSDDRAKAFMHSP-- 304 (423)
T ss_pred HcCCEEEEechhhCCCcCcchhHHHhcCC-CCCeeeee--hhhhcCcccceEEEEcH-H-HHHhhhcCCcccccccCC--
Confidence 99999999999876432111111111122 46877765 999777 5788876654 3 23333211 0001000
Q ss_pred ccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEEEEEecCC
Q 041829 337 QANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLVCFRLLPP 414 (486)
Q Consensus 337 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v~f~~~~~ 414 (486)
+. .+.+....++.++++.+..+ .+.++..++.+++++.|+++.++..+. .....++.+.+...
T Consensus 305 -----------T~-~~np~~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vrg~Gl~~~i~l~~~ 369 (423)
T PRK05964 305 -----------SY-TANPLACAAANASLDLFEDE---PVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIGAVELDRP 369 (423)
T ss_pred -----------CC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHhhccCCCeEEeecccEEEEEEeccC
Confidence 00 11122222333444444322 356777788888888887653332221 22334556666431
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
. .......+.+.|.++| +++.+. + ..+|++. ...+|++|||+++++++++.+++
T Consensus 370 ~-----~~~~~~~l~~~l~~~G-v~v~~~---~-~~lR~~p-~l~~t~edId~~v~~l~~al~~~ 423 (423)
T PRK05964 370 V-----LERDGPALRAFALERG-VLLRPL---G-NTIYLMP-PYIITAEELDRITDAIVEVADEL 423 (423)
T ss_pred c-----chhHHHHHHHHHHHCC-eEEEec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHhhC
Confidence 1 0123467888888888 444432 2 4799998 88899999999999999988653
No 299
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.62 E-value=2.9e-12 Score=129.52 Aligned_cols=306 Identities=13% Similarity=0.059 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+...++.+.|++++..+.. ..+|+++|||||..|+..||....+. ++..|+ .....|-...-+..
T Consensus 116 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t~~~------gr~~ii~~~~~yHG~t~~~ls 182 (442)
T TIGR03372 116 DPLRALLAKTLAALTPGKLK-------YSFFCNSGTESVEAALKLAKAYQSPR------GKFTFIAASGAFHGKSLGALS 182 (442)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHhhc------CCcEEEEECCCccCCCHHHhh
Confidence 34445566668887743222 37899999999999999998753211 233344 44445655444433
Q ss_pred HhCCC---------CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHH
Q 041829 194 IGGIH---------PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAK 260 (486)
Q Consensus 194 ~~g~g---------~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~ 260 (486)
..+-. ...+..+|.+ |.+.+++.+++....+..+.+|++.......|.+-| ++++.++|+
T Consensus 183 ~t~~~~~~~~~~p~~~~~~~~p~~-------d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~~p~~~yl~~l~~lc~ 255 (442)
T TIGR03372 183 ATAKPAFRKPFMPLLPGFHHVAFG-------DIEAMLKALNECKKTGDDVAAIILEPIQGEGGVILPPEGYLPAVRALCD 255 (442)
T ss_pred ccCCcccCCCCCCCCCCCEEeCCC-------CHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcccCCHHHHHHHHHHHH
Confidence 32210 0123333322 678888888654444555778888877777888888 999999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccC
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN 339 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~ 339 (486)
+||+.+++|.++.|+.-...-+.....++ ..|.+++ -|.++.. +++|.++.++. +.+.+.. .++....
T Consensus 256 ~~g~llI~DEV~tG~GRtG~~~a~e~~gv-~PDivt~--gK~lg~G~~Pigavv~~~~--i~~~~~~-~~~~~~~----- 324 (442)
T TIGR03372 256 EFGALLILDEVQTGMGRTGKMFACEHEGV-QPDILCL--AKALGGGVMPIGATIATEA--VFSVLFD-NPFLHTT----- 324 (442)
T ss_pred HcCCEEEEeecccCCCccccchhhhhcCC-CCCeeee--hhhhcCCcccceEEEecHH--HHHhhhc-cCccccC-----
Confidence 99999999999976422111111111233 4788775 5888755 35788777642 2233321 1111100
Q ss_pred CccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CC-eEEecCCCceEEEEEecCC
Q 041829 340 MVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD----LR-FEVVTPRIFSLVCFRLLPP 414 (486)
Q Consensus 340 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~----~~-~~~~~~~~~~~v~f~~~~~ 414 (486)
+ -.+.+....+..++++.+-.+. +.++..++.++|++.|+++ |. +.-+ .....++.+.+..
T Consensus 325 --------T-~~gnp~~~Aaa~a~L~~i~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~~i~~v-RG~Gl~~giel~~- 390 (442)
T TIGR03372 325 --------T-FGGNPLACAAALATINELLEKN---LPAQAAIKGDFLLDGFQQLAAEYPDLIIEA-RGKGLLMAIEFRD- 390 (442)
T ss_pred --------C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhCCCceEEE-ecceEEEEEEeCC-
Confidence 0 1122222334445555553333 4456667777777777653 31 1111 1233455666542
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+.....+.+.+.++| +++.+... +...+|+.. ....|++|+|++++++++.
T Consensus 391 -------~~~~~~i~~~l~~~G-vl~~~~~~-~~~~lr~~P-pl~~t~~~id~~~~~l~~~ 441 (442)
T TIGR03372 391 -------NEIGYAFAKELFQQN-ILVAGTLN-NAKSIRIEP-PLTITIEQCALVIKAAKDA 441 (442)
T ss_pred -------hHHHHHHHHHHHHCC-cEEeecCC-CCCEEEEEC-CcccCHHHHHHHHHHHHHh
Confidence 233467888888888 44443221 235899998 7789999999999999875
No 300
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.61 E-value=1.6e-13 Score=137.31 Aligned_cols=232 Identities=18% Similarity=0.153 Sum_probs=168.5
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCe
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNF 202 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v 202 (486)
+..|+.||.+.+ -++++|.|.||...+.+... +++.|++++.+|.|+..+..+.|+ ..
T Consensus 77 e~aA~~fgAd~t--------yFvvNGTS~ank~vi~a~~~-----------~GD~VLvdRN~HKSi~~glilaGa---~P 134 (557)
T COG1982 77 ELAARVFGADHT--------YFVVNGTSTANKAVINAVLT-----------PGDKVLVDRNCHKSIHHGLILAGA---TP 134 (557)
T ss_pred HHHHHHhCCCce--------EEEECCccHHHHHHHHhhcC-----------CCCEEEecCCccHHHHHHHHHcCC---ce
Confidence 448999999986 58888888888887776554 789999999999999999999999 88
Q ss_pred EEEeCCCCC----CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 203 RVLKTDSST----NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 203 ~~v~~~~~~----~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
+++....+. -+.++.+.+++++.+..... .+++++.+ |..|.+-++++|.+.++++++|+.+|.+++....+
T Consensus 135 vyl~p~~np~~gi~ggI~~~~~~~~l~~~~~~~---k~~vitnp-TYdGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~ 210 (557)
T COG1982 135 VYLEPSRNPLYGIIGGIPLETFKEALLAHPDAE---KLAVITNP-TYDGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDF 210 (557)
T ss_pred EEecCCCCccccccCCCCHHHHHHHHHhChhhh---eeEEEecC-ccceEeecHHHHHHHHhhcCceEEhhhcCcccccc
Confidence 887655443 14789999999887654211 35666655 58899999999999999999999999999887666
Q ss_pred CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCc-----hHHHHHhcC----CcccccccccccCCccCCCCCcc
Q 041829 279 CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDR-----NTLIQSLST----NPEFLKNKASQANMVVDYKDWQI 349 (486)
Q Consensus 279 ~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~-----~~~~~~~~~----~~~yl~~~~~~~~~~~~~~~~~~ 349 (486)
++..... .--.++|.++.+.||.+++-..++.+.+++. +.+.+++.. +|.|.-.
T Consensus 211 ~~~l~~~-~~~~~~~~~tqS~HK~l~alSQaS~iHv~~~~~~~~~r~nea~~~h~STSPsY~l~---------------- 273 (557)
T COG1982 211 SPMLPES-ALNGGADFVTQSTHKLLAALSQASMIHVKDGRAVNHERFNEALMMHQSTSPSYPLM---------------- 273 (557)
T ss_pred cccCcch-hhhcCceEEEechhhhhhhhhhhHHHhhCCCccCCHHHHHHHHHHHccCCchHHHH----------------
Confidence 5543331 1113799999999999999999999999972 333333321 2222211
Q ss_pred CCCCCCCcHHH-HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC
Q 041829 350 PLGRRFRSLKL-WMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI 403 (486)
Q Consensus 350 ~~sr~~~~l~~-~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~ 403 (486)
.++-+ -+.+...|+.-.++-+++..+.++.+++.++++++|.++.++.
T Consensus 274 ------ASlD~Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~~~~~~~~~~~~ 322 (557)
T COG1982 274 ------ASLDVARMQEGNAGRELWQEVIDEAIDFRKALRRLINEIGFFPVLQPEK 322 (557)
T ss_pred ------HHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeeccccc
Confidence 11111 1111123444445558888999999999999998899887653
No 301
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.61 E-value=1.1e-12 Score=127.35 Aligned_cols=338 Identities=15% Similarity=0.121 Sum_probs=202.8
Q ss_pred CCcccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHH
Q 041829 76 SPNYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLV 155 (486)
Q Consensus 76 ~p~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~ 155 (486)
.|.-+||-+ |.....+.+.+... ..| ..| +++|-++.+.+.++++.-+ ..-|+++||||++.
T Consensus 63 Gp~ilGH~~--p~V~~Av~~~l~~G-----~~f-g~P--te~Ei~~Aell~~~~p~~e--------~vrfvnSGTEAtms 124 (432)
T COG0001 63 GPLILGHAH--PAVVEAVQEQLERG-----LSF-GAP--TELEVELAELLIERVPSIE--------KVRFVNSGTEATMS 124 (432)
T ss_pred cccccCCCC--HHHHHHHHHHHHhc-----CCC-CCC--CHHHHHHHHHHHHhcCccc--------EEEEecchhHHHHH
Confidence 566777742 22344444444432 222 123 6788888888999997633 37899999999999
Q ss_pred HHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHHHhC-------------CCC---CCeEEEeCCCCCCCccCHH
Q 041829 156 VLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQIGG-------------IHP---QNFRVLKTDSSTNYSLSPD 218 (486)
Q Consensus 156 al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~~g-------------~g~---~~v~~v~~~~~~~~~id~~ 218 (486)
|++.||... +++.|+ .....|-+......-.| +.. ..++.+|.+ |++
T Consensus 125 AiRlARa~T---------gR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yN-------D~~ 188 (432)
T COG0001 125 AIRLARAYT---------GRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYN-------DLE 188 (432)
T ss_pred HHHHHHHhh---------CCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChhhhccEEEecCC-------CHH
Confidence 999999753 333343 35555655544443332 211 134444443 999
Q ss_pred HHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCc
Q 041829 219 SLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADS 294 (486)
Q Consensus 219 ~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs 294 (486)
+|++++++. |....+|++.-.-.+.|.|.| +++|.++|+++|+.++.|+...|+-....- ....-|+ ..|.
T Consensus 189 al~~~~~~~---g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gG-aq~~~gi-~PDl 263 (432)
T COG0001 189 ALEEAFEEY---GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGG-AQGYYGV-EPDL 263 (432)
T ss_pred HHHHHHHHc---CCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcc-cccccCc-Ccch
Confidence 999998774 345678888888888999976 789999999999999999987665432111 1111123 4677
Q ss_pred eeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcH---HHHHHHHHhCh-h
Q 041829 295 FNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSL---KLWMVLRLYGL-E 370 (486)
Q Consensus 295 ~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l---~~~~~l~~~g~-~ 370 (486)
.++. |.+++..++|++--|.. +-+.+.- .+.+++ .++-+...+ +-.++++.+-. +
T Consensus 264 ttlG--KiIGGGlP~ga~gGr~e--iM~~~~p-~g~vyq----------------aGT~sgnplamaAG~atl~~l~~~~ 322 (432)
T COG0001 264 TTLG--KIIGGGLPIGAFGGRAE--IMEQLAP-LGPVYQ----------------AGTLSGNPLAMAAGLATLEELMTEE 322 (432)
T ss_pred hhhh--hhhcCCcceeeeccHHH--HHhhhCC-CCCccc----------------cCCCCCcHHHHHHHHHHHHHHHhcc
Confidence 6654 88888888888866642 2221111 111111 111122233 33444554433 2
Q ss_pred h-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCC-Cc---cc-chHHHHHHHHHHHccCcEEEEeee
Q 041829 371 N-LQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHN-DE---DH-GNKLNHKLLDDINSTGKIFISHTV 444 (486)
Q Consensus 371 g-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~-~~---~~-~~~~~~~l~~~l~~~g~~~~~~~~ 444 (486)
+ |+.+.+....|+.-|.+.+.+. ++.+...-..+++++.+..... +- .. ..+.-.++...|.++| +++.+..
T Consensus 323 ~~y~~l~~~~~~L~~gl~~~~~~~-g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~G-V~l~ps~ 400 (432)
T COG0001 323 GVYERLDALGERLAEGLRAAAERH-GIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRG-VYLAPSQ 400 (432)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh-CCCeEEeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCC-cccCCcc
Confidence 2 5555555555555555555555 6655444445677777655321 10 00 1112345556788888 7777765
Q ss_pred ECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 445 LSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 445 ~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
+.. .+.+..+|++|||+.++++.++.+++..
T Consensus 401 ~ea------~flS~ahte~di~~~~~a~~~~~~~~~~ 431 (432)
T COG0001 401 FEA------GFLSTAHTEEDIDRTLEAADEAFKELAG 431 (432)
T ss_pred ccc------eeeecccCHHHHHHHHHHHHHHHHHhhc
Confidence 432 2236678999999999999988877653
No 302
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.61 E-value=2.4e-12 Score=130.50 Aligned_cols=317 Identities=11% Similarity=0.076 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEE-cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVI-QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
+...++.+.+++++..+... ....+| ++||||||..|+..||... ++..|+ .....|-...-+..
T Consensus 82 ~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~ls 148 (425)
T PRK09264 82 TAKREFLETFEETILKPRGL----DYKVQFTGPTGTNAVEAALKLARKVT---------GRTNIVAFTNGFHGMTLGSLA 148 (425)
T ss_pred HHHHHHHHHHHHhhcCCcCC----CceEEEeCCCHHHHHHHHHHHHHHhc---------CCCeEEEECCccCCccHHHHH
Confidence 34445555577765322210 002445 5799999999999998752 233333 34445644433333
Q ss_pred Hh---------CCCCCCeEEEeCCCCCCCc-cCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc----CChHHHHHHH
Q 041829 194 IG---------GIHPQNFRVLKTDSSTNYS-LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV----DPLLALGNIA 259 (486)
Q Consensus 194 ~~---------g~g~~~v~~v~~~~~~~~~-id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~ia 259 (486)
.. +.....+..+|........ -|+++|++.+++.......+.+|++.......|.+ +.+++|.++|
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~Epv~g~~G~~~~~~~~l~~l~~lc 228 (425)
T PRK09264 149 VTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVETVQGEGGINVASAEWLQRLAKLC 228 (425)
T ss_pred hcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEecccCCCCCcCCCHHHHHHHHHHH
Confidence 22 1112245566654210001 26788888886532111345677777766667765 3599999999
Q ss_pred HHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCC-CCcceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 260 KSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLT-NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
++||+++++|+.+.|+......+.....++ ..|.++++ |.++. ...+|++++++. +. .+. .....
T Consensus 229 ~~~g~llI~DEV~tG~GrtG~~~~~~~~~v-~PDi~t~~--K~l~~~G~pigav~~~~~--i~-~~~--~~~~~------ 294 (425)
T PRK09264 229 RKHDILLIVDDIQAGCGRTGTFFSFERAGI-TPDIVTLS--KSISGYGLPMALVLIKPE--LD-VWK--PGEHN------ 294 (425)
T ss_pred HHcCcEEEEechhhCCccccHHHHHhhcCC-CCCEEEec--cccCCCccceEEEEEchh--hh-ccC--CCccC------
Confidence 999999999999976432111111111123 46887775 98875 556788888753 21 111 00000
Q ss_pred CCccCCCCCccCCCCCCCcHHHHHHH-HHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEec-CCCceEEEEEec
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLWMVL-RLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVT-PRIFSLVCFRLL 412 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~~~l-~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~-~~~~~~v~f~~~ 412 (486)
.+. .+.+.......+++ ..+.. .++.++..++.++|++.|++ .|.+ +.. .....++.+.+.
T Consensus 295 --------~T~-~gnp~~~aaa~a~l~~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~~-~~~vrg~Gl~~~i~l~ 361 (425)
T PRK09264 295 --------GTF-RGNNLAFVTATAALEEYWSD---DAFEKEVKAKGELVRERLEEIAAKYPGL-GAEVRGRGMMQGIDFG 361 (425)
T ss_pred --------CCC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHHhCCCc-eecceecccEEEEEec
Confidence 010 11111222333444 22222 23556666677777776654 3322 111 112334455554
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
+ ......+...+.+.|.. +.+.... ...+|++. ....|++||++++++|.++.+++.++.
T Consensus 362 ~--------~~~~~~l~~~~~~~Gv~-~~~~~~~-~~~lr~~p-~l~~t~~ei~~~~~~l~~~l~~~~~~~ 421 (425)
T PRK09264 362 D--------GELAGKIAAEAFENGLI-IETSGPE-DEVVKLLP-PLTIDEEELEEGLDILEEAVAEVLAEE 421 (425)
T ss_pred C--------hHHHHHHHHHHHHCCCE-EeccCCC-CCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHhcc
Confidence 2 23446788888888854 4332221 25789987 777899999999999999998876554
No 303
>PRK08354 putative aminotransferase; Provisional
Probab=99.61 E-value=4.3e-13 Score=130.65 Aligned_cols=148 Identities=13% Similarity=0.021 Sum_probs=106.4
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCC
Q 041829 121 VLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQ 200 (486)
Q Consensus 121 ~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~ 200 (486)
+.+++++.+|. +.++|+|+++++..++. +.. +++.|++...+|+.+..+++.+|+
T Consensus 45 l~~~ia~~~~~----------~I~vt~G~~~al~~~~~-~~~-----------~gd~vlv~~P~y~~~~~~~~~~g~--- 99 (311)
T PRK08354 45 LEEEFSKLFGE----------PIVITAGITEALYLIGI-LAL-----------RDRKVIIPRHTYGEYERVARFFAA--- 99 (311)
T ss_pred HHHHHHHHHCC----------CEEECCCHHHHHHHHHH-hhC-----------CCCeEEEeCCCcHHHHHHHHHcCC---
Confidence 34568888872 38999999998765442 211 567788999999999999999999
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEeeccccchhc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGSAC 277 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~ 277 (486)
+++.+ .+|++.|++++++ +.+++++.|+||||.+-+ +++|+++|+++|+|+++|.+|+.+..
T Consensus 100 ~~~~~--------~~d~~~l~~~~~~-------~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~ 164 (311)
T PRK08354 100 RIIKG--------PNDPEKLEELVER-------NSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVK 164 (311)
T ss_pred EEeec--------CCCHHHHHHhhcC-------CCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccc
Confidence 77554 3578888887652 235788899999999965 67777888999999999999977543
Q ss_pred cCccchhcccCCcCCCceeeecccccCCC-CcceEEEE
Q 041829 278 ICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWV 314 (486)
Q Consensus 278 ~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~ 314 (486)
.. . . .. ..--.++.++.|.++.| .-+|+++.
T Consensus 165 ~~-~--~-~~--~~~vi~~~S~SK~~~l~GlRiG~~v~ 196 (311)
T PRK08354 165 KP-E--S-PE--GENIIKLRTFTKSYGLPGIRVGYVKG 196 (311)
T ss_pred cc-c--c-cC--CCcEEEEeccHhhcCCccceeeeeee
Confidence 21 1 0 00 01124456678999855 45787776
No 304
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.59 E-value=3.5e-12 Score=129.88 Aligned_cols=318 Identities=13% Similarity=0.079 Sum_probs=180.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+.+.++.+.|++++.-..+ ..+|+++||+||..|+..||... | ++.+|......|-+..-+....
T Consensus 86 ~~~~~la~~L~~~~~~~~~-------~v~f~~SGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~s~~ 150 (433)
T PRK08117 86 ESILKLAEELAEITPGGLD-------CFFFSNSGAEAIEGALKLAKHVT-------K-RPYIISFTGCFHGRTLGALSVT 150 (433)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCcHHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCCcCHHHHhhc
Confidence 3444455558888731111 37889999999999999998642 1 2334445555676655544332
Q ss_pred CC--------C--CCCeEEEeCCCCCCCc------------cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC--
Q 041829 196 GI--------H--PQNFRVLKTDSSTNYS------------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-- 251 (486)
Q Consensus 196 g~--------g--~~~v~~v~~~~~~~~~------------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-- 251 (486)
+- + ...+..+|.... ++ -|+++|++.+++.. .+..+.+|++.......|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~aavi~Epi~~~~G~~~~~~ 227 (433)
T PRK08117 151 TSKSKYRKYYQPLLGSVYQAPYPYC--DRCPKGEDPEVCFLECLRDLESLFKHQV-TPEEVAAVIIEPVLGEGGYIVPPK 227 (433)
T ss_pred CCCccccccCCCCCCCcEEeCCCcc--ccccccCchhHHHHHHHHHHHHHHHhcc-CCCcEEEEEECCeeCCCCCccCCH
Confidence 21 0 112344554311 11 15667777765421 1234667888777778898888
Q ss_pred --hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcc
Q 041829 252 --LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 --l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|.++|++||+++++|.+|.|+......+.....++ ..|.+ ..-|.++..+.+|+++.+++ +...+... .
T Consensus 228 ~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv-~pDi~--t~sK~lg~G~pigav~~~~~--i~~~~~~~-~ 301 (433)
T PRK08117 228 SFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGV-VPDIM--TIAKGIASGLPLSAVVASKE--LMEQWPLG-S 301 (433)
T ss_pred HHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCC-CCCEe--ehhhhccCCCcceeEEEcHH--HHhhccCC-C
Confidence 99999999999999999999987422111110000122 24654 45699886566888877643 22222110 0
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEec-CCCc-eE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVT-PRIF-SL 406 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~-~~~~-~~ 406 (486)
+ ..+. .+.+....++.++++.+..+ ++.++..++.+++++.|+++. .+.++. .+.. .+
T Consensus 302 ~---------------~~T~-~~np~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~Gl~ 362 (433)
T PRK08117 302 H---------------GTTF-GGNPVACAAALATLEVIKEE---KLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLM 362 (433)
T ss_pred C---------------CCCC-CcCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCceeeeecCCcE
Confidence 0 0011 11122233444455544333 355666777788887776641 111111 1111 23
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
+.+.+...... ........+.+.+.+.|.++.. .. ....++|+++ ...+|+++|++++++|.++.+++.+
T Consensus 363 ~gi~~~~~~~~--~~~~~~~~~~~~l~~~Gv~~~~-~g-~~~~~lRl~p-~~~~t~~~i~~~~~~l~~~l~~~~~ 432 (433)
T PRK08117 363 IGIEIVDPDGE--PDGDAVEKILDKCLEKGLLFYL-CG-NAGNVLRMIP-PLTVTKEEIDEGLDILDEALTEYEA 432 (433)
T ss_pred EEEEEecCCCC--cchHHHHHHHHHHHHCCCEEee-cC-CCCCEEEEeC-CccCCHHHHHHHHHHHHHHHHHHhc
Confidence 34444322100 0123456677888888855432 21 1235899998 6788999999999999999877653
No 305
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.59 E-value=1.6e-12 Score=124.83 Aligned_cols=330 Identities=16% Similarity=0.165 Sum_probs=195.5
Q ss_pred cccccCCCCCCHHHHHHHHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHH
Q 041829 78 NYFAYYPSNSSVAGFLGEMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVL 157 (486)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al 157 (486)
..+||. .|.....+.+.....+..+... .++...+ +.++|+++.+ ..+ ..+|++||||||-.|+
T Consensus 54 ~~lGH~--hP~iv~al~~Q~~kl~h~sn~~--~~~~~~~----la~~L~~~s~-~~d-------~vff~NSGaEA~EaAi 117 (404)
T COG4992 54 NNLGHC--HPALVEALKEQAEKLWHVSNLF--YNEPQAE----LAEKLVELSP-FAD-------RVFFCNSGAEANEAAL 117 (404)
T ss_pred eccCCC--CHHHHHHHHHHHHHhhhccccc--CChHHHH----HHHHHHhhCc-ccc-------EEEEcCCcHHHHHHHH
Confidence 344553 3444555555554433322222 2333333 4445888886 222 4899999999999999
Q ss_pred HHHHHHHHHHhCccCCCC-eEEEecCCCchhHHHHHHHhC-------CC--CCCeEEEeCCCCCCCccCHHHHHHHHHHH
Q 041829 158 LAARDKALKRVGKNSLEK-LVVYASDQTHSALQKACQIGG-------IH--PQNFRVLKTDSSTNYSLSPDSLAEAISRD 227 (486)
Q Consensus 158 ~~a~~~~~~~~~~~~~~~-~~v~~s~~~H~s~~~a~~~~g-------~g--~~~v~~v~~~~~~~~~id~~~L~~~i~~~ 227 (486)
..||.+.. +..+ ..|......|-...-+...-| .+ ...++.+|.+ |+++|+++|+++
T Consensus 118 KlARk~~~------~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfn-------Di~al~~ai~~~ 184 (404)
T COG4992 118 KLARKYTG------DPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFN-------DIEALEAAIDED 184 (404)
T ss_pred HHHHHHcC------CCCCcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCC-------CHHHHHHHhccC
Confidence 99998753 0122 334444445633222211111 10 1134555543 999999999986
Q ss_pred HhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeeccccc
Q 041829 228 LTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWF 303 (486)
Q Consensus 228 ~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l 303 (486)
+ ..|++.-..-..|++-| ++++.++|++||+.++.|+.+.|..--..-+..-..++ .-|.+++. |.|
T Consensus 185 t------aAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV-~PDI~tla--K~L 255 (404)
T COG4992 185 T------AAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGV-EPDILTLA--KAL 255 (404)
T ss_pred e------EEEEEecccCCCCCCCCCHHHHHHHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCC-CCCEEEee--ccc
Confidence 5 46777777777787744 88999999999999999999877532211111111123 46887764 999
Q ss_pred CCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCc-cCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHH
Q 041829 304 LTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQ-IPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQL 382 (486)
Q Consensus 304 ~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~-~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~ 382 (486)
++..+.|+++.+. . ....+ .. ..++ .-+|.+......-++++.+-.+ ++.++..++
T Consensus 256 gGG~PigA~la~~-~-~~~~~-------~~-----------G~HgSTfGGNpLacAv~~a~l~~l~~e---~ll~~v~~~ 312 (404)
T COG4992 256 GGGFPIGAMLATE-E-IASAF-------TP-----------GDHGSTFGGNPLACAVALAVLEVLLEE---GLLENVREK 312 (404)
T ss_pred cCCccceeeEEch-h-hhhcC-------CC-----------CcccCCCCcCHHHHHHHHHHHHHHcch---hHHHHHHHH
Confidence 8888999999883 2 21111 10 1111 1122222222333445555444 455667778
Q ss_pred HHHHHHHHhcCCC-eEEecC--CCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCC
Q 041829 383 AKHFEGLVAQDLR-FEVVTP--RIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPL 459 (486)
Q Consensus 383 a~~l~~~l~~~~~-~~~~~~--~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~ 459 (486)
..+|.+.|+++.. +.++.+ -..-++-+.+.+.. ....+...+.++|.+.... +..++|+.. ...
T Consensus 313 g~~~~~~L~~l~~~~~~v~~vRG~GLmiGiel~~~~--------~a~~~~~~~~~~gvL~~~a----~~~ViR~~P-pL~ 379 (404)
T COG4992 313 GEYLLQRLRELKRRYPLVKEVRGRGLMIGIELKEPY--------RARDIVRALREEGVLVLPA----GPNVIRFLP-PLV 379 (404)
T ss_pred HHHHHHHHHHHhhcCCceeeeecceeEEEEEecCcc--------cHHHHHHHHHHCCeEEecC----CCCeEEecC-Ccc
Confidence 8888888877521 223322 22234555554310 2366788888889444332 234999998 778
Q ss_pred CCHHHHHHHHHHHHHHHHHHHH
Q 041829 460 TEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 460 ~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+++||+..+++|+++++....
T Consensus 380 i~~eei~~~~~~l~~~l~~~~~ 401 (404)
T COG4992 380 ITEEEIDEALDALERALAAASA 401 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHhhh
Confidence 8999999999999999887654
No 306
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.59 E-value=1.1e-12 Score=129.25 Aligned_cols=276 Identities=13% Similarity=0.022 Sum_probs=172.3
Q ss_pred HHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 119 MIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 119 ~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
.++.+++++.+|.+.. ...++|+|+++++.. +..+.. ++. |++...++..+..+++..|+
T Consensus 56 ~~L~~~ia~~~~~~~~------~~I~i~~Gs~e~i~~-l~~~~~-----------~g~-v~v~~P~y~~y~~~~~~~g~- 115 (339)
T PRK06959 56 DGLAACAARYYGAPDA------AHVLPVAGSQAAIRA-LPALLP-----------RGR-VGIAPLAYSEYAPAFARHGH- 115 (339)
T ss_pred HHHHHHHHHHhCCCCc------ccEEECcCHHHHHHH-HHHhcC-----------CCe-EEEcCCCcHHHHHHHHHCCC-
Confidence 3455569999999642 158888888887643 322211 444 66688899999999999999
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHH---HHHHhCCEEEeeccccch
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGN---IAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~---ia~~~g~~lhvD~A~g~~ 275 (486)
+++.+|.+. +.+.+ .. .+++++.|+||||.+-+.+++.+ .|++++.++++|.+|..+
T Consensus 116 --~~~~v~~~~--------~~~~~----~~------~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~ 175 (339)
T PRK06959 116 --RVVPLDEAA--------DTLPA----AL------THLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADT 175 (339)
T ss_pred --EEEeecccc--------hhccc----cC------CEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccC
Confidence 888887652 12211 11 25788889999999977655555 466789999999999865
Q ss_pred hccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCC
Q 041829 276 ACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRR 354 (486)
Q Consensus 276 ~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~ 354 (486)
... +...... ..++ -.+..++.|.++.| .-+|+++.. ++.+........+|.
T Consensus 176 ~~~-~s~~~~~-~~~~-vi~l~SfSK~~gl~GlRiGy~v~~-~~li~~l~~~~~~~~----------------------- 228 (339)
T PRK06959 176 LPA-ASLAAHT-DRPG-LVVLRSVGKFFGLAGVRAGFVLAA-PALLAALRDALGAWT----------------------- 228 (339)
T ss_pred CCc-ccchhcc-CCCC-EEEEecChhhcCCcchheEEEecC-HHHHHHHHHhcCCCC-----------------------
Confidence 321 1111111 0111 14566789998744 557887764 333332222111111
Q ss_pred CCcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH
Q 041829 355 FRSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN 433 (486)
Q Consensus 355 ~~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~ 433 (486)
...+...++...+. .+..++..++..+.++++.+.|+++ ++++. +..+.+.+++. . ..++.+.|.
T Consensus 229 vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-g~~~~--~~~~f~~~~~~-~----------~~~l~~~l~ 294 (339)
T PRK06959 229 VSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAH-GFAVH--ATPLFSWTDDP-R----------AAALHAALA 294 (339)
T ss_pred CcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHC-CCCcc--CcceEEEEeCC-C----------HHHHHHHHH
Confidence 11223333333332 2345566777788889999999987 77765 22233334432 1 146778888
Q ss_pred ccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 434 STGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 434 ~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
++| +.+... ....++|+++ . .++++.++++++|+++.+.+.+
T Consensus 295 ~~G-I~vr~~--~~~~~lRisi-~--~~~~e~~~l~~al~~~~~~~~~ 336 (339)
T PRK06959 295 RRG-IWTRYF--APPPSVRFGL-P--ADEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred hCC-eEEEEC--CCCCeEEEEC-C--CCHHHHHHHHHHHHHHHHHHhh
Confidence 888 444432 3345899998 2 3678999999999998877654
No 307
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.58 E-value=1.4e-12 Score=128.23 Aligned_cols=267 Identities=10% Similarity=0.030 Sum_probs=167.5
Q ss_pred HHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCC
Q 041829 122 LDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQN 201 (486)
Q Consensus 122 ~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~ 201 (486)
++.+++.+|.+ +.++|+|+++++..++.. . +++.|++...++..+...++.+|+ +
T Consensus 55 r~~ia~~~~~~---------~I~it~Gs~~al~~~~~~--~-----------~gd~v~v~~P~y~~~~~~~~~~g~---~ 109 (330)
T PRK05664 55 EAAARAYYGAP---------QLLPVAGSQAAIQALPRL--R-----------APGRVGVLSPCYAEHAHAWRRAGH---Q 109 (330)
T ss_pred HHHHHHHhCCC---------CEEECcCHHHHHHHHHHc--c-----------CCCEEEEcCCChHHHHHHHHHcCC---e
Confidence 34478888753 389999998887654321 1 677899999999999999999999 9
Q ss_pred eEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEEeeccccchhcc
Q 041829 202 FRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFHVDAAYAGSACI 278 (486)
Q Consensus 202 v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lhvD~A~g~~~~~ 278 (486)
++.||++ +++++++ . +.+++++.|+||||.+-+ +++|+++|+++|+++++|.+|..+.-
T Consensus 110 ~~~v~~~----------~~~~~~~-~------~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~- 171 (330)
T PRK05664 110 VRELDEA----------EVEAALD-S------LDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTP- 171 (330)
T ss_pred EEEechh----------hHhhhhc-C------CCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCC-
Confidence 9888764 2444443 1 235788899999999966 56666778899999999999964321
Q ss_pred CccchhcccCCcCCC--ceeeecccccCC-CCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCC
Q 041829 279 CPEYRQYIDGVEEAD--SFNMNAHKWFLT-NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRF 355 (486)
Q Consensus 279 ~~~~~~~~~~~~~aD--s~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~ 355 (486)
.+.. ..+..-+ .++.++.|.++. ..-+|+++.. +..+.........|. .
T Consensus 172 ~~s~----~~~~~~~~vi~~~SfSK~~gl~GlRiG~~v~~-~~l~~~~~~~~~~~~-----------------------~ 223 (330)
T PRK05664 172 QHSL----AACAHRPGLIVLRSFGKFFGLAGARLGFVLAE-PALLRALAELLGPWT-----------------------V 223 (330)
T ss_pred cccc----cccccCCCEEEEeeccccccCCCcceEEEEeC-HHHHHHHHHhcCCCC-----------------------C
Confidence 1111 1121222 456778999974 4568888764 333332211111111 0
Q ss_pred CcHHHHHHHHHhC-hhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHc
Q 041829 356 RSLKLWMVLRLYG-LENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINS 434 (486)
Q Consensus 356 ~~l~~~~~l~~~g-~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~ 434 (486)
..+..+++...+. .+..++..++..+.++++.+.|+++ +++.. ......+.++. + + ..++.+.|.+
T Consensus 224 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~-~~~~~-~~~~~f~~~~~-~--------~--~~~~~~~l~~ 290 (330)
T PRK05664 224 SGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRH-GLTPA-GGCALFQWVRT-E--------D--AAALHEFLAR 290 (330)
T ss_pred CHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHC-CCccc-CCcceEEEEec-C--------C--HHHHHHHHHH
Confidence 1122223333321 2334566677777889999999987 55421 12223333333 1 1 1466777777
Q ss_pred cCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 435 TGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 435 ~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.|. .+.. +....++|+++ +. ++++.+++.++|+++.++
T Consensus 291 ~gi-~v~~--f~~~~~iRis~-~~--~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 291 RGI-LTRL--FEQPASLRFGL-PA--DEADWARLDQALLAYRKE 328 (330)
T ss_pred CCe-EEEE--CCCCCeEEEEC-CC--CHHHHHHHHHHHHHHHhh
Confidence 774 4443 22346899999 32 678899999999877553
No 308
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.57 E-value=1.2e-11 Score=127.21 Aligned_cols=331 Identities=10% Similarity=0.077 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++.+.++.+.|.+++.-..- ...+|+++||+||..|+..||..... .+..+ +..+|......|-+..-+..+
T Consensus 132 ~~~~~~lae~L~~~~~~~~~------~~v~f~~SGsEA~e~AlKlAr~~~~~-~g~~~-r~~iI~~~~~yHG~t~~a~sl 203 (504)
T PLN02760 132 TKPSLDLAKELLEMFTARKM------GKVFFTNSGSEANDTQVKLVWYYNNA-LGRPN-KKKFIARSKSYHGSTLISASL 203 (504)
T ss_pred cHHHHHHHHHHHhhcCCCCC------CEEEEeCChHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCccCChHhhhhc
Confidence 34444555557777532110 13788999999999999999864211 11111 234566666778776655554
Q ss_pred hCCC---------CCCeEEEeCCCCCCCc-------------cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-
Q 041829 195 GGIH---------PQNFRVLKTDSSTNYS-------------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~~~~-------------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~- 251 (486)
.|.. ...+..+|.+. .++ ...++|++.+.+. ....+.+|++.......|.+-|
T Consensus 204 sg~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAAvI~EPv~g~gG~~~p~ 279 (504)
T PLN02760 204 SGLPALHQKFDLPAPFVLHTDCPH--YWRFHLPGETEEEFSTRLADNLENLILKE--GPETIAAFIAEPVMGAGGVIPPP 279 (504)
T ss_pred cCChhhccCCCCCCCCcEEeCCCc--ccccCCCCCcHHHHHHHHHHHHHHHHHhc--CCCceEEEEECCccCCCCCcCCC
Confidence 4431 11122333211 011 1124566666431 1234667777777777788888
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCC
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~ 327 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|+++.+++ +.+.+...
T Consensus 280 ~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv-~PDivtl--gK~lggG~~PigAv~~~~~--i~d~~~~~ 354 (504)
T PLN02760 280 ATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNI-KPDLVSL--AKALSSAYMPIGAVLVSPE--ISDVIHSQ 354 (504)
T ss_pred HHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCC-CCcEEEe--cccccCCccccceEeecHH--HHhhhhcc
Confidence 99999999999999999999966533322221112234 4787776 48886543 5677777642 22333211
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCce
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFS 405 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~ 405 (486)
.+.... . ....+. .+.+.....+.++|+.+-.+ +++++..++.++|++.|+++....++.+ -...
T Consensus 355 ~~~~~~--------~-~h~~T~-~gnPl~~Aaala~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 421 (504)
T PLN02760 355 SNKLGS--------F-AHGFTY-SGHPVSCAVALEALKIYKER---NIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGL 421 (504)
T ss_pred cccccC--------c-ccCCCC-CCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCeeeEEeCce
Confidence 100000 0 000011 12122223444445554333 4577788888999888876533222211 1123
Q ss_pred EEEEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 406 LVCFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 406 ~v~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
++.+.+..... +. .....+...+.+.+.++|.+ +.+ .+ ..+|++. ....|++|||++++++.+++.++.+
T Consensus 422 ~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl-~~~---~g-~~lrl~P-pl~it~eeid~~~~~l~~al~~~~~ 494 (504)
T PLN02760 422 ILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGML-VRV---AG-DNIMMSP-PLIITPEEVDELISIYGKALKATEE 494 (504)
T ss_pred EEEEEEecCCcccccccchhHHHHHHHHHHHhCCcE-EEe---cC-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 45555532111 00 00123456778888888854 332 12 3689987 6678999999999999998877643
No 309
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.57 E-value=1.3e-11 Score=122.04 Aligned_cols=319 Identities=12% Similarity=0.072 Sum_probs=199.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHHHh
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQIG 195 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~~ 195 (486)
...+..+.|.+++.-+.. .-.+|+++||+||-.|+..||... ++. +|-.....|-...-++.+.
T Consensus 100 ~~v~~ae~L~~~~p~~~~------~~~~f~~sGaeA~E~AiKiAr~~T---------gr~~viaf~~afHG~T~galslT 164 (447)
T COG0160 100 PYVELAEKLTALAPGSGL------KKVFFGNSGAEAVEAAIKIARAYT---------GRPGVIAFDGAFHGRTLGALSLT 164 (447)
T ss_pred hHHHHHHHHHHhCCcccC------CeEEecCCcHHHHHHHHHHHHHHh---------CCCcEEEECCcccccchhhHHhc
Confidence 334444447776643211 247999999999999999999864 233 3333455576655555543
Q ss_pred --------CCC--CCCeEEEeCCCC--CCC--------ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 196 --------GIH--PQNFRVLKTDSS--TNY--------SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 196 --------g~g--~~~v~~v~~~~~--~~~--------~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
|.+ ...++.+|.... +.+ .-..+.++..+.+....+..|.++++.......|.+.|
T Consensus 165 ~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~vAaiI~EpIQgegG~~v~p~~f 244 (447)
T COG0160 165 GSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEVAAIIIEPIQGEGGIIVPPKGF 244 (447)
T ss_pred cCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCceeEEEEecccCCCCCcCCCHHH
Confidence 222 124777876531 001 11344566666666556677899999988888898865
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
++++.++|++||+.+++|..+.|+.--..-|..-..++ ..|.+|++ |.++...+.|.++.|..- .... ++-.
T Consensus 245 l~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv-~PDivt~a--K~ig~G~Pl~avv~r~ei--~~~~---~g~~ 316 (447)
T COG0160 245 LKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGV-EPDIVTLA--KSLGGGLPLSAVVGRAEI--MDWP---PGGH 316 (447)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCC-CCCEEEec--ccccCCCceeEEeccHHh--cccC---Cccc
Confidence 89999999999999999999988654332222222334 57998876 888877778888887632 1110 0000
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCc--eEEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTPRIF--SLVC 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~~~~--~~v~ 408 (486)
..+ -.|.+..+.+..++++.+-.+ .++++..++.+++++.|.++. .+.++.+... -++.
T Consensus 317 --------------~~T-f~GNpva~Aaa~AvL~vie~e---~L~~~a~~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~g 378 (447)
T COG0160 317 --------------GGT-FGGNPVACAAALAVLDVIEEE---NLLERAAELGEYLRDRLEELQEKHPLIGDVRGLGLMIG 378 (447)
T ss_pred --------------CCC-CCcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHhhcCceecccccceEEE
Confidence 001 123233334445555555444 566778888888988887542 2334444332 2444
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.+..+....+-..+...++.+++.++|.+..+.... .+++||.. -...+++++|..++.|.+++++.
T Consensus 379 iE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~~--~nviRi~P-PL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 379 VELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGPH--GNVLRILP-PLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCCC--CcEEEEeC-CcccCHHHHHHHHHHHHHHHHhh
Confidence 4443211111113467788999999999655554332 25899988 66789999999999999887754
No 310
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=3.2e-11 Score=122.53 Aligned_cols=317 Identities=12% Similarity=0.089 Sum_probs=179.6
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.|+++++.+.+ ..+|+++||||+..|+..||... ++..|+. ...-|-....+...
T Consensus 84 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~t---------gr~~ii~~~~~yHG~t~~a~s~ 147 (443)
T PRK08360 84 VEPLLLAEKLIEIAPGDNP-------KVSFGLSGSDANDGAIKFARAYT---------KRRKILSYLRSYYGSTYGAMSL 147 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCHHHHHHHHHHHHHHhc---------CCCeEEEEeCCcCCcCHHHHHh
Confidence 3445555668888754322 48999999999999999998752 2333433 33446544333333
Q ss_pred hCCC---------CCCeEEEeCCCCCC--Cc--------cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 195 GGIH---------PQNFRVLKTDSSTN--YS--------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~~--~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
.|.. ...+..+|...... +. -+.+.++++++... .+..+.+|++.-..+++|.+-|
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAAvi~eP~~~~~G~~~~~~~~ 226 (443)
T PRK08360 148 TGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEV-YAEGVAALFAEPIQGDAGMIVPPEDY 226 (443)
T ss_pred cCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhcc-CCCCeEEEEECCccCCCCCcCCCHHH
Confidence 3321 11344555432100 00 12344555554321 1245677888766688898755
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
+++|.++|++||+++++|.+|.++.....-+.....++ .-|.+++ -|.++..+..|+++.+. + +.+.+... .+.
T Consensus 227 l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~-~pDiitl--sK~l~~G~pigav~~~~-~-i~~~~~~~-~~~ 300 (443)
T PRK08360 227 FKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGV-EPDIITL--GKPLGGGLPISATIGRA-E-IMDSLPPL-AHA 300 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCC-CCCEEEe--cccccCCceeEEEEEcH-H-HHhhhcCC-CCC
Confidence 89999999999999999999987533221111111133 3577665 79988656688887764 2 22222110 000
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCceEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD----LRFEVVTPRIFSLV 407 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~v 407 (486)
.+. .+.+.....+.++++.+..+ ++.++..++.++|++.|+++ |-+.-+ .....++
T Consensus 301 ---------------~T~-~~~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rg~Gl~~ 360 (443)
T PRK08360 301 ---------------FTL-SGNPVASAAALAVIEEIEEK---NLLKRAEKLGNYTKKRLEEMKKKHELIGDV-RGIGLMI 360 (443)
T ss_pred ---------------CCC-CcCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHHhCCCeeee-eccceEE
Confidence 011 11122233444555555333 34566777777777777653 212111 2233355
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.+.+................+...+.+.| +++.+. +...+|++. ...+|++||+++++++.+++.++.
T Consensus 361 gie~~~~~~~~~~~~~~~~~~~~~l~~~G-i~~~~~---~~~~lr~~P-~l~~t~~~id~~~~~l~~~l~~~~ 428 (443)
T PRK08360 361 GVDLVKDRETKERAYEEAAKVVWRAWELG-LIVTFF---SGNVLRIQP-PLTIEKEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred EEEEecCCcccCccHHHHHHHHHHHHHCC-eEEeec---CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHH
Confidence 55553211000001233457778888888 444332 235899988 788999999999999999987654
No 311
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.55 E-value=4.7e-12 Score=126.79 Aligned_cols=277 Identities=12% Similarity=0.122 Sum_probs=160.2
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCC------CeEEEeCCCCCCCccC
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQ------NFRVLKTDSSTNYSLS 216 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~------~v~~v~~~~~~~~~id 216 (486)
.++++|||+||..|+..+|... + ++.+|......|-+...++...|.... .+..++..+ ..|
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~-------~-~~~vv~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d 154 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKAT-------G-KQEIITFQNSFHGRTFGSMSATGQDKIKDGFGDGVPHFSYAI----FND 154 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhc-------C-CCeEEEECCCcCcccHHHHhccCCcccCCCCCCCCCCeEEeC----CCC
Confidence 6899999999999999987642 0 234455566678877776655443100 011111100 248
Q ss_pred HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC
Q 041829 217 PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA 292 (486)
Q Consensus 217 ~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a 292 (486)
+++|++++.+. ..+|++..+.+++|.+.+ +++|.++|+++|+++++|++|.++......+.....++ .-
T Consensus 155 l~~l~~~l~~~------~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~-~p 227 (375)
T PRK04260 155 LNSVKALVNKN------TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGI-EP 227 (375)
T ss_pred HHHHHHhcCCC------eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCC-CC
Confidence 89999887532 357888888888898855 89999999999999999999976422111111111222 34
Q ss_pred CceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhh-
Q 041829 293 DSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLEN- 371 (486)
Q Consensus 293 Ds~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g- 371 (486)
|.+ +..|.++.....|+++.++. +...+... .+. .+. .+.+.....+.++++.+..+.
T Consensus 228 di~--t~sK~l~~G~~ig~~~~~~~--~~~~~~~~-~~~---------------~t~-~~~~~~~~aa~a~l~~~~~~~~ 286 (375)
T PRK04260 228 DIF--TLAKGLANGVPVGAMLAKSS--LGGAFGYG-SHG---------------STF-GGNKLSMAAASATLDIMLTAGF 286 (375)
T ss_pred CEE--EecccccCCcceEEEEEcHH--HHhhcCCC-CCC---------------CCC-CcCHHHHHHHHHHHHHHHhhHH
Confidence 654 46798875566888888753 22222110 000 000 111222334444454443222
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEE
Q 041829 372 LQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYIL 451 (486)
Q Consensus 372 ~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~l 451 (486)
.++..+....+.+.+.+.+.+.+.+.-+. ....++.+.+.. ...++.+++.+.|.. +.+. +...+
T Consensus 287 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~~g~~~~~~~~~----------~~~~~~~~l~~~Gi~-v~~~---~~~~l 351 (375)
T PRK04260 287 LEQALENGNYLQEQLQKALQDKETVTTVR-GLGYMIGIETTA----------DLSQLVEAARDKGLI-VLTA---GTNVI 351 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCCeeEEe-ccceEEEEEecC----------cHHHHHHHHHhCCCE-EecC---CCCEE
Confidence 23333333334444444444443332221 233445555521 124677888888854 4332 34689
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~ 475 (486)
|+++ +...+++||+++++.|+++
T Consensus 352 R~~~-~~~~t~~~i~~~l~~l~~~ 374 (375)
T PRK04260 352 RLLP-PLTLTKEEIEQGIAILSEV 374 (375)
T ss_pred EEcC-CCccCHHHHHHHHHHHHHh
Confidence 9999 7788999999999999765
No 312
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.55 E-value=5.9e-12 Score=128.10 Aligned_cols=310 Identities=13% Similarity=0.080 Sum_probs=162.4
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCC-CchhHHHHHHHhCCC
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQ-THSALQKACQIGGIH 198 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~-~H~s~~~a~~~~g~g 198 (486)
++.+.+++.+...+ ..++++|||+|+..|+..||... ++..|++... .|-.........+.+
T Consensus 92 ~lae~l~~~~~~~~--------~v~~~~sGseA~e~Alk~ar~~~---------gr~~ii~~~~~yhG~~~~~~~~~~~~ 154 (423)
T TIGR00713 92 LLAKEIISRVPSVE--------MVRFVNSGTEATMSAVRLARGYT---------GRDKIIKFEGCYHGHHDALLVKAGSG 154 (423)
T ss_pred HHHHHHHHhCCccc--------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEEcCCCCCChhhhhccccCc
Confidence 34444777664332 48999999999999999998752 3344444444 454332222211111
Q ss_pred CCCeEEEeCCCC-------CCC---ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCC
Q 041829 199 PQNFRVLKTDSS-------TNY---SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGM 264 (486)
Q Consensus 199 ~~~v~~v~~~~~-------~~~---~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~ 264 (486)
... ...|..+. ..+ ..|+++|++++++. +.++.+|++....+++|.+.| +++|.++|++||+
T Consensus 155 ~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~---~~~~aavi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~ 230 (423)
T TIGR00713 155 AAT-LGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEY---GEEIAGVIVEPVAGNMGVVPPKPEFLAGLRALTEEYGS 230 (423)
T ss_pred ccc-cCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHc---CCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHhCC
Confidence 000 00011000 000 12899999988642 223556777644455798866 7999999999999
Q ss_pred EEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCC
Q 041829 265 WFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDY 344 (486)
Q Consensus 265 ~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~ 344 (486)
++++|.+|.++ .....+.....++ ..|.++ .-|.++.....|+++.++. +.+.+.....+...
T Consensus 231 llI~DEv~~g~-r~g~~~~~~~~~~-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~~~~~~~----------- 293 (423)
T TIGR00713 231 LLIFDEVMTGF-RVALGGAQEYFGV-EPDLTT--LGKIIGGGLPVGAFGGRRE--IMERLAPEGPVYQA----------- 293 (423)
T ss_pred EEEEEcccccc-ccCcchhHHHhCC-Ccchhh--hhhhhcCCCceeeeeEHHH--HHHhhCcCCCeeec-----------
Confidence 99999999765 2211111111122 346554 5698875556788877642 33333211000000
Q ss_pred CCCccCCCCCCCcHHHHHHHHHhChhh-HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCC-Cc----
Q 041829 345 KDWQIPLGRRFRSLKLWMVLRLYGLEN-LQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHN-DE---- 418 (486)
Q Consensus 345 ~~~~~~~sr~~~~l~~~~~l~~~g~~g-~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~-~~---- 418 (486)
+.-++.+....++.++++.+..+. ++...+....+.+.|.+.++++ ++..-......++.+.+..... +.
T Consensus 294 ---~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~v~~~g~~~~v~~~~~~~~~~~~~~ 369 (423)
T TIGR00713 294 ---GTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEVLEDT-GIPHTVNRVGSMFSLFFTEEEVTNYADAK 369 (423)
T ss_pred ---cCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHhc-CCCeEEEeeccEEEEEEecCCCCChhhhh
Confidence 001121222334444555443332 3333333334444455555555 3332112223444444432110 00
Q ss_pred ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 419 DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 419 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.........+.+.+.+.| +++.+.. ...+|++. ..|++||++++++|.++.++
T Consensus 370 ~~~~~~~~~~~~~l~~~G-v~v~~~~---~~~~~l~~---~~t~~~i~~~~~~l~~~l~~ 422 (423)
T TIGR00713 370 KSDTELFAKFFHEMLDKG-VFLPPSQ---FEACFLSA---AHTEEDIENTIEAAEEVFAE 422 (423)
T ss_pred cccHHHHHHHHHHHHHCC-eEEecCC---ccceeeEC---CCCHHHHHHHHHHHHHHHhh
Confidence 001122346777888887 5555432 23577765 36999999999999888754
No 313
>PRK06541 hypothetical protein; Provisional
Probab=99.55 E-value=2.5e-11 Score=123.88 Aligned_cols=330 Identities=14% Similarity=0.108 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+...++.+.+++++.-+.+ ..+|+++||+|+..|+..||..... .+..+ +..+|......|-...-+....
T Consensus 95 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~~a~s~~ 165 (460)
T PRK06541 95 PPAIELAERLAALAPGDLN-------RVFFTTGGSEAVESAWKLAKQYFKL-TGKPG-KHKVISRAIAYHGTTQGALAIT 165 (460)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEcCCcHHHHHHHHHHHHHHHHh-cCCCC-ccEEEEEcCcccCcchhhhcCc
Confidence 3444455557777642222 4799999999999999999875311 11110 2233444444565544444332
Q ss_pred CCC---------CCCeEEEeCCCCCC---CccC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 196 GIH---------PQNFRVLKTDSSTN---YSLS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 196 g~g---------~~~v~~v~~~~~~~---~~id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
|.. ...+..+|....-. +.-+ ++.|++.++.. ....+.+|++.-..++.|.+-|
T Consensus 166 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~--~~~~~Aavi~EPv~g~~G~~~~~~~y 243 (460)
T PRK06541 166 GLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFE--GPDTVAAVFLEPVQNAGGCFPPPPGY 243 (460)
T ss_pred CChhhccccCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCCEEEEEECCccCCCCCccCCHHH
Confidence 221 11234444321000 1112 25666666532 1234566676666778899888
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc-c
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP-E 329 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~-~ 329 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.++..+ +.|.++.+++. . ..+.... .
T Consensus 244 l~~l~~lc~~~g~llI~DEV~tGfGR~G~~~a~~~~gv-~PDivt~--gK~l~~G~~pigav~~~~~i-~-~~~~~~~~~ 318 (460)
T PRK06541 244 FERVREICDRYDVLLVSDEVICAFGRLGEMFGCERFGY-VPDIITC--AKGITSGYSPLGAMIASDRL-F-EPFLDGPTM 318 (460)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchhhhhhhcCC-CCCEEEe--cccccCCccceeEEEEcHHH-H-HHhhcCCCc
Confidence 99999999999999999999965432221111111233 4687764 58887554 57888776542 2 2222111 1
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLV 407 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v 407 (486)
++... + ..+.+.....+.++++.+..+ .+.++..++.++|.+.|+++....++. .....++
T Consensus 319 ~~~~~-------------T-~~gnp~~~aaala~l~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vrg~Gl~~ 381 (460)
T PRK06541 319 FLHGY-------------T-FGGHPVSAAVALANLDIFERE---GLLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFY 381 (460)
T ss_pred cccCC-------------C-CCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecceEE
Confidence 11000 0 011112222333444444333 345777888899998887763222211 1223344
Q ss_pred EEEecCCC--CC---cccchH-HHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPH--ND---EDHGNK-LNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 408 ~f~~~~~~--~~---~~~~~~-~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+.+.... .. ....+. ....+.+.+.++| +++.+. ..+..++|++. ....|++|||+++++|.++.+++.+
T Consensus 382 ~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-i~~~~~-~~g~~~lrl~P-pl~~t~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06541 382 GIELVKDKATKETFTDDESERLLRGFLSPALFEAG-LYCRAD-DRGDPVVQLAP-PLISGQEEFDEIEQILRSVLTEAWA 458 (460)
T ss_pred EEEEecCcccccCCcchhhhhhHHHHHHHHHHhCC-eEEEec-CCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHh
Confidence 55543211 00 000111 2235677788888 555442 12446899998 6778999999999999999987654
No 314
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.54 E-value=1.4e-11 Score=117.57 Aligned_cols=332 Identities=14% Similarity=0.138 Sum_probs=203.2
Q ss_pred cccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 106 FSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 106 ~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
..|..+.+..++-..+.+-....+..+... ..+.++|+|.|.+...++.++.+ .++.|++...++
T Consensus 94 lQYg~s~G~peLl~fik~h~~~~ih~p~~~----~wdiiit~G~t~~l~~~l~~~~N-----------~gd~vlie~~ty 158 (472)
T KOG0634|consen 94 LQYGQSSGIPELLLFIKDHNRPTIHAPPYK----NWDIIITNGNTDGLFKVLRTLIN-----------RGDHVLIEEYTY 158 (472)
T ss_pred hccccccCcHHHHHHHHHhccccccCCCCC----CceEEEecCCchHHHHHHHHhhc-----------CCCceEEecccc
Confidence 356666777777666444333333333320 12689999999999999998888 688899999999
Q ss_pred hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhC---CCccEEE-EEecCCccccccCCh---HHHHHH
Q 041829 186 SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTI---GLIPFFL-CATVGTTSSTAVDPL---LALGNI 258 (486)
Q Consensus 186 ~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~---g~~p~~v-v~~~~~t~tG~id~l---~~I~~i 258 (486)
.+...+++.+|+ +++.|+.|.+ .|++|.|++.++.-... ..+|.++ .+-.|.|+||.--.+ ++|.++
T Consensus 159 ~~AL~s~~a~gv---~~ipv~md~~---Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~L 232 (472)
T KOG0634|consen 159 PSALQSMEALGV---KIIPVKMDQD---GIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQL 232 (472)
T ss_pred hHHHHhccccCc---eEEeccccCC---CCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHH
Confidence 999999999999 8888888754 79999999998764322 1234332 333478999988665 689999
Q ss_pred HHHhCCEEEeeccccchhccC--cc-------ch------hcccCCcC--CC--ceeee-cccccCCCCcceEEEEeCch
Q 041829 259 AKSNGMWFHVDAAYAGSACIC--PE-------YR------QYIDGVEE--AD--SFNMN-AHKWFLTNFDCSALWVKDRN 318 (486)
Q Consensus 259 a~~~g~~lhvD~A~g~~~~~~--~~-------~~------~~~~~~~~--aD--s~~~~-~hK~l~~p~~~g~l~~r~~~ 318 (486)
||+|++.++.|..|.-..+.. +. +. .+...... .| .+..+ +.|.+....-.|++...+.
T Consensus 233 ArKyDfLIVeDdpYy~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~- 311 (472)
T KOG0634|consen 233 ARKYDFLIVEDDPYYFLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSL- 311 (472)
T ss_pred HHHcCEEEEecCccceeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhhcCcceeEEeecCHH-
Confidence 999999999999986543321 10 00 00100000 11 22222 3455543334455433321
Q ss_pred HHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHH----HHHHHHHHHHhc-C
Q 041829 319 TLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHI----QLAKHFEGLVAQ-D 393 (486)
Q Consensus 319 ~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~----~~a~~l~~~l~~-~ 393 (486)
.+.+.+ +..+...+.-..+...-+++.++..|.+|+.+.+.+.+ ++++.+...+.+ +
T Consensus 312 ~l~ril------------------~~ae~~t~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kyl 373 (472)
T KOG0634|consen 312 FLKRIL------------------DLAEVATSGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKYL 373 (472)
T ss_pred HHHHHh------------------hhcceeecCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 122111 11112222222245567888999999988776666544 456666666655 4
Q ss_pred CC--eEEecCCCceEE-EEEecCCC-CCcccchHHHHHHHHHHHccCcEEEEeeeE--C-----CEeEEEEEecCCCCCH
Q 041829 394 LR--FEVVTPRIFSLV-CFRLLPPH-NDEDHGNKLNHKLLDDINSTGKIFISHTVL--S-----GKYILRFAVGAPLTEW 462 (486)
Q Consensus 394 ~~--~~~~~~~~~~~v-~f~~~~~~-~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~--~-----~~~~lRi~~~~~~~t~ 462 (486)
|. +++. +|..+++ .+++.-.. ......++....+...+.+.|+..+.+..+ . ++-++|+++ + ....
T Consensus 374 p~~~~~~~-~P~aGmFiwv~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~-a-~a~~ 450 (472)
T KOG0634|consen 374 PKSVCEYH-PPKAGMFIWVEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSI-A-FAEP 450 (472)
T ss_pred CCCeeEEe-cCCcceEEEEEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEcCccCCCcceEEEEe-e-cCCH
Confidence 44 3444 5655544 44553100 001124555566777788888766655533 1 234999999 3 4477
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 041829 463 RHVNAAWEVMQDKASALL 480 (486)
Q Consensus 463 ~di~~~~~~l~~~~~~l~ 480 (486)
++++..++++..++++..
T Consensus 451 e~l~~g~~rf~~~ike~f 468 (472)
T KOG0634|consen 451 EKLDEGIERFGSVIKEHF 468 (472)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 888888888887776543
No 315
>PRK12403 putative aminotransferase; Provisional
Probab=99.53 E-value=1e-10 Score=119.39 Aligned_cols=326 Identities=13% Similarity=0.060 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~ 194 (486)
+...++.+.|+++++.+.+ ..+|+++||+||..|+..||...... +. ..+.+|+. ....|-+..-+...
T Consensus 98 ~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AiklAr~~~~~~-g~--~~r~~ii~~~~~yHG~t~~~~s~ 167 (460)
T PRK12403 98 PAVIELSELLFSLLPGHYS-------HAIYTNSGSEANEVLIRTVRRYWQVL-GK--PQKKIMIGRWNGYHGSTLAATAL 167 (460)
T ss_pred HHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CC--CCCcEEEEECCCcCcccHhhhhc
Confidence 3444455558888863222 38999999999999999998653111 10 02333333 33447776666555
Q ss_pred hCCCC--------CCeEEEeCCCC--CCCcc--------CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----h
Q 041829 195 GGIHP--------QNFRVLKTDSS--TNYSL--------SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----L 252 (486)
Q Consensus 195 ~g~g~--------~~v~~v~~~~~--~~~~i--------d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l 252 (486)
.|... ..+..+|.... ..+.+ +.+.|++.+.+.. ...+.+|++.......|.+.| +
T Consensus 168 s~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~--~~~iaavI~Epv~g~gG~~~~~~~yl 245 (460)
T PRK12403 168 GGMKFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELG--AENVAGFVAEPFQGAGGMIFPPESYW 245 (460)
T ss_pred CCCccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhC--CCceEEEEEccccCCCCCccCCHHHH
Confidence 44310 12334442210 00011 1355666554321 134567777777777788877 9
Q ss_pred HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc-cc
Q 041829 253 LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP-EF 330 (486)
Q Consensus 253 ~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~-~y 330 (486)
++|.++|++||+.+++|+++.|+.-...-+.....++ ..|.+++ -|.++..+ ++|.++.+++ +.+.+.... .|
T Consensus 246 ~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~--gK~lggG~~Piga~v~~~~--i~~~~~~~~~~~ 320 (460)
T PRK12403 246 PEIQRICRQYDVLLCADEVIGGFGRTGEWFAHEHFGF-EPDTLSI--AKGLTSGYVPMGGLVLSKR--IAEALVEQGGVF 320 (460)
T ss_pred HHHHHHHHHcCCEEEEeccccCCCcCchhhhhhhcCC-CCCeEEE--cccccccccceEEEEECHH--HHHHHhcCCCcc
Confidence 9999999999999999999977533221111111234 3688875 58887664 6787777642 333332111 11
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHH-HHHHHHHHHHhc----CCCeEEecCCCce
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHI-QLAKHFEGLVAQ----DLRFEVVTPRIFS 405 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~-~~a~~l~~~l~~----~~~~~~~~~~~~~ 405 (486)
+... | -.+.+....++.++|+.+-.+. ++++.. ++.++|++.|++ .|-+.-+ .-...
T Consensus 321 ~~~~-------------T-~~gnPl~~Aaala~L~~i~~~~---l~~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rG~Gl 382 (460)
T PRK12403 321 AHGL-------------T-YSGHPVAAAVAIANLKALRDEG---VVTRVKDDTGPYLQRCLREVFGDHPLVGEV-QGAGL 382 (460)
T ss_pred ccCC-------------C-CCCCHHHHHHHHHHHHHHHhcc---HHHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eecce
Confidence 1100 0 0121222334445555554443 344553 566666666643 3322111 12223
Q ss_pred EEEEEecCCCC-Cc--ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 406 LVCFRLLPPHN-DE--DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 406 ~v~f~~~~~~~-~~--~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
++.+.+..... .. .........+...+.++|. ++.+. + ..+|++. ....|++||+++++.++++++++.++
T Consensus 383 ~~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl-l~~~~---~-~~~~l~P-pl~it~~eid~~~~~l~~al~~~~~~ 456 (460)
T PRK12403 383 VAALQFAEDKATRKRFANENDLAWRCRTIGFEEGV-IIRST---L-GRMIMAP-ALVAGRAEIDELVDKTRIAVDRTARE 456 (460)
T ss_pred EEEEEEccCccccccccchhHHHHHHHHHHHhCCE-EEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 44555532110 00 0011233446666778884 44321 1 2578877 66779999999999999999887643
No 316
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.53 E-value=1.9e-11 Score=123.33 Aligned_cols=313 Identities=12% Similarity=0.070 Sum_probs=174.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEE-cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVI-QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKAC 192 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~-t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~ 192 (486)
++...++.+.|++++..+... ....+| +++||||+..|+..||... ++..|+ .....|-...-+.
T Consensus 77 ~~~~~~lae~l~~~~~~~~~~----~~~~~f~~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~al 143 (412)
T TIGR02407 77 TEAKREFLETFNEIILKPRGL----DYKVQFPGPTGTNAVESALKLARKVT---------GRSNVVSFTNAFHGMTLGSL 143 (412)
T ss_pred cHHHHHHHHHHHHhccCccCC----CceEEEeCCCchHHHHHHHHHHhhhc---------CCCeEEEECCCcCCchHHHH
Confidence 445555666677765222110 002445 5899999999999998752 233344 3444565544444
Q ss_pred HHhCC---------CCCCeEEEeCCCCCCC-ccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc----CChHHHHHH
Q 041829 193 QIGGI---------HPQNFRVLKTDSSTNY-SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV----DPLLALGNI 258 (486)
Q Consensus 193 ~~~g~---------g~~~v~~v~~~~~~~~-~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~i 258 (486)
...|. ....+..+|....... .-+++.+++.+.+.......+.+|++.-.....|.+ +-+++|.++
T Consensus 144 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~Epi~g~~G~~~~~~~~l~~l~~l 223 (412)
T TIGR02407 144 SVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILETVQGEGGINVASDEWLQRLEKL 223 (412)
T ss_pred HhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEeccccCCCCCccCCHHHHHHHHHH
Confidence 33221 1123455554311000 124677888875432111245677776666677775 238999999
Q ss_pred HHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCC-CCcceEEEEeCchHHHHHhcCCcccccccccc
Q 041829 259 AKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLT-NFDCSALWVKDRNTLIQSLSTNPEFLKNKASQ 337 (486)
Q Consensus 259 a~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~ 337 (486)
|++||+++++|+.+.|+.-...-+.....++ ..|.++++ |+++. .+.+|++++++. + ..+. ... ..
T Consensus 224 c~~~g~llI~DEV~tG~GRtG~~~a~~~~~v-~PDi~~~~--K~lg~~G~pigav~~~~~--~-~~~~--~~~--~~--- 290 (412)
T TIGR02407 224 CRRHDILLIVDDIQAGCGRTGTFFSFEPAGI-EPDIVCLS--KSISGYGLPLALTLIKPE--L-DVWK--PGE--HN--- 290 (412)
T ss_pred HHHcCCEEEEechhhCCCccchhHHhcccCC-CCCEEEec--hhccCCccceeEEEEchh--h-hccC--CCc--cC---
Confidence 9999999999999876532111111111223 46877765 99876 677899988753 2 2221 000 00
Q ss_pred cCCccCCCCCccCCCCCCCcHHHHHHHHH-hChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEec
Q 041829 338 ANMVVDYKDWQIPLGRRFRSLKLWMVLRL-YGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLL 412 (486)
Q Consensus 338 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~ 412 (486)
. +. .+.+.......++++. +..+. ..++..++.++|++.|+. .|++..-......++.+.+.
T Consensus 291 -------~--T~-~gnpl~~aaa~a~l~~~i~~~~---l~~~~~~~g~~l~~~l~~l~~~~~~~~~~vrg~Gl~~~l~l~ 357 (412)
T TIGR02407 291 -------G--TF-RGNNLAFVTATAALEYYWSDDA---FEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECG 357 (412)
T ss_pred -------C--CC-CccHHHHHHHHHHHHHHhcccH---HHHHHHHHHHHHHHHHHHHHhhCCCceEeeecceeEEEEEec
Confidence 0 11 1111111233455653 43333 344555566666666553 44332211223334556664
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+ .....++...+.++|.+ +.+... +...+|++. ....|++|++++++.|+++++
T Consensus 358 ~--------~~~~~~~~~~~~~~Gv~-v~~~~~-~~~~lr~~p-~l~~t~~~i~~~~~~l~~~l~ 411 (412)
T TIGR02407 358 D--------GDLAGKIAKAAFENGLI-IETSGP-NDEVIKLLP-PLTIDEETLQQGLDILEQAVE 411 (412)
T ss_pred C--------hHHHHHHHHHHHHCCCE-EeccCC-CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 2 23446788888888854 443222 235799998 888999999999999998764
No 317
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.53 E-value=9.1e-11 Score=118.05 Aligned_cols=308 Identities=13% Similarity=0.092 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~ 194 (486)
+...++.+.|+++.+..+ ..+|++|||+|+..|+..||...... +.. .++. +|-.....|-...-+...
T Consensus 82 ~~~~~la~~L~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~~~~~-g~~-~~r~~ii~~~~~yHG~t~~~~s~ 151 (408)
T PRK04612 82 APPLKLAEELVTASRFAE--------KVFLCNSGTEANEAAIKLVRKWASSQ-GRP-ADKRVIVTFRGSFHGRTLAAVTA 151 (408)
T ss_pred HHHHHHHHHHHhhCCCCC--------EEEEcCchHHHHHHHHHHHHHHHHhh-CCC-CCCcEEEEECCCcCCccHHHHHh
Confidence 344455566777764322 48999999999999999999753211 100 0133 344444456554444433
Q ss_pred hCCCC---------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHH
Q 041829 195 GGIHP---------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKS 261 (486)
Q Consensus 195 ~g~g~---------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~ 261 (486)
.|-.. ..++.+| --|++.|++.++. ..+.+|++.-.....|.+.| +++|.++|++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~-------~~d~~~l~~~~~~-----~~~aavi~eP~~~~gg~~~~~~~~l~~l~~l~~~ 219 (408)
T PRK04612 152 TAQPKYQEGYEPLPGGFRYVD-------FNDVEALEAAMAG-----GDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQ 219 (408)
T ss_pred cCCcccccCCCCCCCCceEcC-------CCCHHHHHHhhCC-----CCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHH
Confidence 33210 0111222 1278888887742 22445555443333344432 8999999999
Q ss_pred hCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCc
Q 041829 262 NGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMV 341 (486)
Q Consensus 262 ~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~ 341 (486)
||+++++|.+|.|+.....-+.....++ ..|.+++ -|.++..+..|+++.++. +.+.+... . .
T Consensus 220 ~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pdi~t~--~K~l~~G~piga~~~~~~--~~~~~~~~---~-~-------- 282 (408)
T PRK04612 220 HDALLVLDEIQCGMGRTGTLFAHWQEQV-TPDIVTL--AKALGGGFPIGAMLAGPK--VAETMQFG---A-H-------- 282 (408)
T ss_pred cCCEEEEeccccCCCcCCchhhhhhcCC-CCCEEEE--cchhcCCCceEEEEECHH--HHhhhcCC---C-c--------
Confidence 9999999999986432111111110111 2455554 588876567888877643 22222210 0 0
Q ss_pred cCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-eEEec--CCCceEEEEEecCCCCCc
Q 041829 342 VDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR-FEVVT--PRIFSLVCFRLLPPHNDE 418 (486)
Q Consensus 342 ~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~-~~~~~--~~~~~~v~f~~~~~~~~~ 418 (486)
..+. ++.+.....+..+++.+-. .++.++..++.++|.+.|+++.. +.++. .....++.+.+.+.
T Consensus 283 ----~~t~-~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~l~~l~~~~~~i~~vrg~Gl~~~i~~~~~---- 350 (408)
T PRK04612 283 ----GTTF-GGNPLAAAVARVALRKLAS---PQIAANVARQSAALRAGLEALNAEFGVFAQVRGRGLMLGAVLAPA---- 350 (408)
T ss_pred ----CCCC-CCCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeccceEEEEEecCc----
Confidence 0011 1222333344445555432 35667777888888888876421 22221 22233445554321
Q ss_pred ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 419 DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 419 ~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.......+.+.+.+.|.+ +.+ .+...+|++. ....|++||+++++++++++.++.+
T Consensus 351 --~~~~a~~i~~~l~~~Gvl-v~~---~g~~~lRl~P-pl~it~eeid~~l~~l~~~l~~~~~ 406 (408)
T PRK04612 351 --HAGQAGAILDLAAEHGLL-LLQ---AGPDVLRFVP-ALNLTDAELADGLARLRLALADYVA 406 (408)
T ss_pred --hhhHHHHHHHHHHHCCeE-Eee---CCCCEEEEcC-CccCCHHHHHHHHHHHHHHHHHHhh
Confidence 112345677888888844 433 2446899998 7888999999999999999887654
No 318
>PRK06105 aminotransferase; Provisional
Probab=99.52 E-value=6.1e-11 Score=121.08 Aligned_cols=330 Identities=10% Similarity=0.081 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
.+.+.++.+.|++++..+.+ ..+|+++||+|+..|+..+|.....+ +..+ +..+|......|-....+...
T Consensus 91 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlKlar~~~~~~-g~t~-r~~il~~~~~yHG~t~~a~s~ 161 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMS-------KVFFTNSGSEANDTVVKLVWYYNNAL-GRPE-KKKIISRQRGYHGVTIASASL 161 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEecCccCCcchhheec
Confidence 44455566668888743222 47999999999999999988542111 1111 233444455556555443332
Q ss_pred hCCC---------CCCeEEEeCCCCCCCcc-------------CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-
Q 041829 195 GGIH---------PQNFRVLKTDSSTNYSL-------------SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~~~~i-------------d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~- 251 (486)
.|.. ...+..+|.... ++. ..++|++++... ....+.+|++.......|.+-|
T Consensus 162 t~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~le~~~~~~--~~~~iAavIvEPiqg~gG~~~~~ 237 (460)
T PRK06105 162 TGLPNNHRSFDLPLDRILHTGCPHY--YRFGLPGESEEAFATRLANELEALILAE--GPDTIAAFIGEPVMGAGGVIVPP 237 (460)
T ss_pred cCCcccccccCCCCCCCEEcCCCcc--cccccCCCChHHHHHHHHHHHHHHHHHc--CCCceEEEEEccccCCCCCccCC
Confidence 2211 112333332210 111 235677766431 1234677777776777788877
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCC
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~ 327 (486)
++++.++|++||+.+++|+.+.|+.....-+.....++ ..|.++++ |.++.. .+.|+++.++. +...+...
T Consensus 238 ~~yl~~lr~lc~~~~~llI~DEv~tG~GRtG~~f~~~~~~v-~PDi~~~g--K~lggG~~P~~av~~~~~--i~~~~~~~ 312 (460)
T PRK06105 238 KTYWEKIQAVLRKYDILLVADEVICGFGRTGNMFGCETFGI-KPDILVMS--KQLSSSYQPLSAVLMNEK--VYDPIADE 312 (460)
T ss_pred HHHHHHHHHHHHHcCCeEEEeccccCCCcCchhhhHHhcCC-CCCeeeee--cccccCcccceEEEEcHH--HHHHHhcc
Confidence 99999999999999999999866533221111111233 47887764 888654 35788877653 22333211
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCce
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFS 405 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~ 405 (486)
..... . +...+...+.+.....+.++|+.+-.+ +++++..++.++|++.|+++....++.+ ....
T Consensus 313 ~~~~~--------~--~~h~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~v~~~g~~l~~~L~~l~~~~~v~~vrG~Gl 379 (460)
T PRK06105 313 SGKIG--------T--FGHGFTASGHPVAAAVALENLAIIEER---DLVGNAAERGARLQARLRALADHPLVGEVRGVGL 379 (460)
T ss_pred cccCc--------c--cccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEEEecce
Confidence 10000 0 000000112222223344455555333 4567788888888888876533222211 1223
Q ss_pred EEEEEecCCCCC--c-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 406 LVCFRLLPPHND--E-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 406 ~v~f~~~~~~~~--~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
++.+.+...... . ........++...+.+.| +++.+. + .++|++. ....|++|||++++.+.++++++.+
T Consensus 380 ~~gie~~~~~~~~~~~~~~~~~a~~i~~~~~~~G-vl~~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~l~~~~~ 452 (460)
T PRK06105 380 IAAVELVADKATKTPFEPPGKVGARANAAAHEHG-VISRAM---G-DTLAFCP-PLIITAAQVDEMVDRFGRALDDVAA 452 (460)
T ss_pred EEEEEEecCcccCCCCCchhHHHHHHHHHHHHCC-eEEEec---C-CEEEEEC-CCccCHHHHHHHHHHHHHHHHHHHH
Confidence 444555321100 0 001233456778888888 444432 2 4799987 5668999999999999999988764
No 319
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=8.4e-11 Score=119.54 Aligned_cols=314 Identities=12% Similarity=0.086 Sum_probs=178.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
++.+.++.+.|++++.-+.. ...+|++|||||+..|+..||... ++..|+ .....|-...-+..
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~------~~v~f~~SGsEA~e~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~~ls 160 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFE------KKVFFTNSGTESNEAAIKIARYHT---------GRKYIIAFLGAFHGRTYGSLS 160 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHHh---------CCCeEEEECCCcCCccHHHHH
Confidence 34556666778888742110 148999999999999999999652 233343 34445654444443
Q ss_pred HhCC----------CCCCeEEEeCCCCCCCc-----cC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccC
Q 041829 194 IGGI----------HPQNFRVLKTDSSTNYS-----LS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD 250 (486)
Q Consensus 194 ~~g~----------g~~~v~~v~~~~~~~~~-----id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id 250 (486)
..|- ....+..+|.... ++ -| .+.+++.+.+....+..+.+|++.......|.+-
T Consensus 161 ~t~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~ 238 (441)
T PRK05769 161 LTASKPVQRKGFFPLMPGVIHVPYPNP--YRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVV 238 (441)
T ss_pred hcCCCcccccCCCCCCCCeEEeCCCcc--ccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcC
Confidence 3221 0123445554210 11 11 2334442222111233467777777777788888
Q ss_pred C----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcC
Q 041829 251 P----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLST 326 (486)
Q Consensus 251 ~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~ 326 (486)
| +++|.++|++||+++++|.++.|+.....-+.....++ ..|.++++ |.++..++.|+++.++.- . ..+.
T Consensus 239 ~~~~~l~~l~~l~~~~g~lli~DEv~tG~gr~G~~~a~~~~gv-~pDivt~~--K~l~~G~p~gav~~~~~i-~-~~~~- 312 (441)
T PRK05769 239 PPKNFFKELRKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGV-EPDIITLA--KAIAGGLPLGAVIGRAEL-M-FLPP- 312 (441)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEechhhCCCcccceehhhccCC-CCCEEEEc--ccccCCcccEEEEEehhh-h-hcCC-
Confidence 8 99999999999999999999886432111111111133 35887764 887766678888776532 1 1110
Q ss_pred CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CC
Q 041829 327 NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTP--RI 403 (486)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~--~~ 403 (486)
... ..+. .+.+.....+.++++.+.. +..++..++.++|++.|+++. .+.++.. ..
T Consensus 313 --~~~--------------~~T~-~g~p~~~aaa~a~L~~l~~----~~~~~~~~~g~~l~~~L~~l~~~~~~~~~vrg~ 371 (441)
T PRK05769 313 --GSH--------------ANTF-GGNPVAAAAALATLEELEE----GLLENAQKLGEYLRKELKELKEKYEFIGDVRGL 371 (441)
T ss_pred --CCC--------------CCCC-CcCHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeecc
Confidence 000 0011 1222223344455555422 566777788888888886531 1222211 12
Q ss_pred ceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 404 FSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 404 ~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
..++.+.+..... +........+.+.+.++|. ++.+ .+...+|++. ....|++|||+++++++++..++
T Consensus 372 G~~~~i~~~~~~~--~~~~~~~~~~~~~~~~~Gi-l~~~---~~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 372 GLMIGVELVKDRK--EPDPKLRDKVLYEAFKRGL-LLLG---AGKSAIRIIP-PLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred eEEEEEEeccCCc--cccHHHHHHHHHHHHhCCc-EEec---CCCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHh
Confidence 2344555532110 0012345677788888884 4433 2335899998 77889999999999999988654
No 320
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.52 E-value=1.5e-10 Score=117.90 Aligned_cols=320 Identities=14% Similarity=0.106 Sum_probs=176.8
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+.+.++.+.|++++.-... ...+|+++||+||..|+..||... | ++.+|......|-...-+..+.
T Consensus 85 ~~~~~lae~L~~~~p~~~~------~~v~f~~SGseA~e~AiklAr~~t-------g-r~~ii~~~~~YHG~t~~als~s 150 (445)
T PRK08593 85 EPLVRLAKKLCELAPGDFE------KRVTFGLSGSDANDGIIKFARAYT-------G-RPYIISFTNAYHGSTYGSLSMS 150 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh-------C-CCeEEEECCCcCCCcHHHHhhc
Confidence 4445555568888742210 137999999999999999998752 1 2233444555576555454443
Q ss_pred CCC----------CCCeEEEeCCCCCC--C-ccCH-------HHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 196 GIH----------PQNFRVLKTDSSTN--Y-SLSP-------DSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 196 g~g----------~~~v~~v~~~~~~~--~-~id~-------~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
+.. ...++.+|...... + ..+. +++++.+++.. ....+.+|++.......|.+-|
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavI~EPv~g~gG~~~~~~~y 229 (445)
T PRK08593 151 GISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL-PADEVACIVIETIQGDGGLLEPVPGY 229 (445)
T ss_pred CCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhc-CCCceEEEEEccccCCCCCcCCCHHH
Confidence 311 11244455432100 0 1122 33444333211 1234667777777777788866
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.++..++.|+++.+++ +.+.+.. ..+.
T Consensus 230 l~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv-~pDi~t~--gK~l~~G~p~gav~~~~~--i~~~~~~-~~~~ 303 (445)
T PRK08593 230 FEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNI-TPDLMSF--GKSLAGGMPMSAIVGRKE--IMESLEA-PAHL 303 (445)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCC-CCCEeee--cccccCCcccEEEEEcHH--HHhhhcc-CCCC
Confidence 99999999999999999999866422111010011123 3677765 588865566788877642 3333321 1111
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLV 407 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v 407 (486)
. +. .+.+....++.++++.+-.+ +++++..++.++|++.|++ +|-+.-+ .-...++
T Consensus 304 ~---------------T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~Gl~~ 363 (445)
T PRK08593 304 F---------------TT-GANPVSCAAALATIDMIEDE---SLLQRSAEKGEYARKRFDQWVSKYNFVGDV-RGYGLSI 363 (445)
T ss_pred C---------------CC-CCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHHHhcCCcEEEE-eccceEE
Confidence 0 11 12222223344555554333 4566677777777777765 3321111 1111233
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+.+................+...+.++| +++.+. +...+|++. ....|++||+++++++.++.+++.+
T Consensus 364 gi~l~~~~~~~~~~~~~~~~~~~~~~~~G-v~~~~~---~~~~lr~~p-~l~~t~~~id~~~~~l~~~l~~~~~ 432 (445)
T PRK08593 364 GIDIVSDKKLKTRDNEAALKICNYCFEHG-VVIIAV---AGNVLRFQP-PLVITYEQLDTALNTIEQAFTALEA 432 (445)
T ss_pred EEEEecCCCcCCCcHHHHHHHHHHHHHCC-eEEecc---CCCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 33332211000001234567888888888 444332 225899998 8889999999999999999887653
No 321
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.51 E-value=5.5e-11 Score=120.86 Aligned_cols=315 Identities=13% Similarity=0.107 Sum_probs=171.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCC
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGI 197 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~ 197 (486)
..++.+.++++.+.+.. ...+|+++|++|+..|+..+|... + ++.+|..+..-|-...-+....+-
T Consensus 86 ~~~la~~l~~~~~~~~~------~~~~f~~sGsea~e~Alklar~~~-~-------r~~iv~~~~~yHG~~~~~~~~~~~ 151 (425)
T PRK08088 86 YLELCEKMNQKVPGDFA------KKTLLVTTGSEAVENAVKIARAAT-K-------RSGVIAFTGAYHGRTHYTLALTGK 151 (425)
T ss_pred HHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHHh-C-------CCeEEEECCccCCccHHHHHhhCC
Confidence 34666778887764321 147889999999999999988742 1 333455566667655444333221
Q ss_pred --------C--CCCeEEEeCCCCCCCccC----HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHH
Q 041829 198 --------H--PQNFRVLKTDSSTNYSLS----PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIA 259 (486)
Q Consensus 198 --------g--~~~v~~v~~~~~~~~~id----~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia 259 (486)
+ ...+..++.....+ .++ ++.|++.+++. ..+..+.+|++.......|.+-+ +++|.++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~~~~~~~l~~~l~~~-~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~ 229 (425)
T PRK08088 152 VNPYSAGMGLMPGHVYRALYPCPLH-GVSEDDAIASIERIFKND-AAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALC 229 (425)
T ss_pred CCccccCCCCCCCCcEEcCCCcccc-CccHHHHHHHHHHHHHhc-cCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHH
Confidence 0 11122222211100 122 55677777532 12334667777766666677655 89999999
Q ss_pred HHhCCEEEeeccccchhccCccchh-cccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccccccccccc
Q 041829 260 KSNGMWFHVDAAYAGSACICPEYRQ-YIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQA 338 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~~~~~~~~-~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~ 338 (486)
++||+++++|.+|+++... ..... ...++ ..|. .+.-|.++..+..|+++.+.. +.+.+.... +.
T Consensus 230 ~~~~~~lI~Dev~~g~g~~-g~~~~~~~~~~-~pdi--~s~sK~l~~G~rig~v~~~~~--~~~~~~~~~-~~------- 295 (425)
T PRK08088 230 DEHGIMLIADEVQTGAGRT-GTLFAMEQMGV-AADL--TTFAKSIAGGFPLAGVTGRAE--VMDAIAPGG-LG------- 295 (425)
T ss_pred HHcCCEEEEeccccCCCcC-cchhHHhhcCC-CCCE--EEEeccccCCCcceeeEecHH--HHhhcCCCC-CC-------
Confidence 9999999999999874321 11110 01111 2454 455799986667888887542 222221110 00
Q ss_pred CCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCceEEEEEecCC
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVA----QDLRFEVVTPRIFSLVCFRLLPP 414 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~----~~~~~~~~~~~~~~~v~f~~~~~ 414 (486)
.+. .+.......+...++.... ++++++..++.+++.+.|. +.|.+.-+..+ ..++.+.+...
T Consensus 296 --------~t~-~~~~~~~~a~~~~l~~~~~---~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~v~g~-G~~~~l~l~~~ 362 (425)
T PRK08088 296 --------GTY-AGNPIACAAALAVLKVFEQ---ENLLQKANALGEKLKDGLLAIAEKHPEIGDVRGL-GAMIAIELFED 362 (425)
T ss_pred --------CCC-CcCHHHHHHHHHHHHHHHh---cCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEecc-ceEEEEEEecC
Confidence 000 1111122223333333322 2344444444555554443 34544333233 34455665321
Q ss_pred CCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 415 HNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 415 ~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
............++...+.+.|..+.+...+ ..++|+++ ....++++|++.++.|.++.++
T Consensus 363 ~~~~~p~~~~~~~l~~~~~~~Gv~~~~~~~~--~~~iRl~~-~~~~t~~ei~~~i~~l~~~l~~ 423 (425)
T PRK08088 363 GDHSKPNAKLTAQIVARARDKGLILLSCGPY--YNVLRILV-PLTIEDAQIRQGLEIIAQCFDE 423 (425)
T ss_pred CCCCCCCHHHHHHHHHHHHhCCCEEecCCCC--CCEEEEEC-CCCcCHHHHHHHHHHHHHHHHh
Confidence 1000001234577888888888555432222 25899999 6678999999999999988764
No 322
>PRK06062 hypothetical protein; Provisional
Probab=99.50 E-value=1.1e-10 Score=118.84 Aligned_cols=316 Identities=9% Similarity=0.031 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+...++.+.|+++..-+.+ ..+|+++||+|+..|+..||... ++..|+ .....|-...-+..
T Consensus 94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~t---------gr~~ii~~~~~yHG~t~~als 157 (451)
T PRK06062 94 NDARSEAARLIAERAPGDLS-------KVFFTNGGADANEHAVRMARLHT---------GRPKVLSAYRSYHGGTGSAIN 157 (451)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEcCChHHHHHHHHHHHHHhh---------CCceEEEEeCCCCCCCHHHHh
Confidence 34445555668887742222 48999999999999999998752 233343 34445654444443
Q ss_pred HhCCC--------CCCeEEEeCCCCCCCc------cC-------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-
Q 041829 194 IGGIH--------PQNFRVLKTDSSTNYS------LS-------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP- 251 (486)
Q Consensus 194 ~~g~g--------~~~v~~v~~~~~~~~~------id-------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~- 251 (486)
..|.. ...+..++... .++ -| ++.|++.++.. ....+.+|++.......|.+-|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~--~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~iAaviiEPv~g~gG~~~p~ 233 (451)
T PRK06062 158 LTGDPRRWPNDTGRAGVVHFFGPF--LYRSEFHATTEEEECERALAHLERVIELE--GPSTIAAILLESVPGTAGILVPP 233 (451)
T ss_pred hcCCcccccCCCCCCCCEEeCCCC--ccccccCCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCC
Confidence 33210 01223333221 111 12 57777777531 1234667777777777788888
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCC
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTN 327 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~ 327 (486)
+++|.++|++||+.+++|.++.|+.-...-+.....++ ..|.+++ -|.++..+ +.|.++.++ + +.+.+..
T Consensus 234 ~~yl~~lr~lc~~~g~lLI~DEV~tGfGRtG~~~a~~~~gv-~PDi~t~--gK~lggG~~Pigav~~~~-~-i~~~~~~- 307 (451)
T PRK06062 234 PGYLAGVRELCDRHGIVLIADEVMAGFGRTGKWFAIEHFGV-VPDLITF--AKGVNSGYVPLGGVAISE-A-IAATFAD- 307 (451)
T ss_pred HHHHHHHHHHHHHcCCEEEeeccccCCCcCcHHHHHHhcCC-CCCeeee--chhhhcCCcCcEEEEEcH-H-HHHHhcc-
Confidence 99999999999999999999987532211111111234 4787776 58887654 578888876 3 3333321
Q ss_pred cccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHH-HHHHHHHhc----CCCeEEecCC
Q 041829 328 PEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLA-KHFEGLVAQ----DLRFEVVTPR 402 (486)
Q Consensus 328 ~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a-~~l~~~l~~----~~~~~~~~~~ 402 (486)
..+... .+. .+.+.....+.++++.+-.+. ++++..++. ++|++.|++ .|.+.-+ ..
T Consensus 308 ~~~~~~-------------~T~-~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~G~~~l~~~L~~l~~~~~~v~~v-rG 369 (451)
T PRK06062 308 RPYPGG-------------LTY-SGHPLACAAAVATINAMEEEG---IVENAARIGAEVLGPGLRELAERHPSVGEV-RG 369 (451)
T ss_pred CCCCCC-------------CCC-CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhcCCcEEeE-ec
Confidence 111100 011 121222334445555554433 445555554 455555544 3322111 11
Q ss_pred CceEEEEEecCCC--CC---cc-cchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPH--ND---ED-HGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 403 ~~~~v~f~~~~~~--~~---~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
...++.+.+.... .. .. .......++.+.+.+.|.+ +.+ .+ ..+|++. ...+|++|||++++++++++
T Consensus 370 ~Gl~~gve~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gvl-~~~---~~-~~lrl~p-pl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 370 LGVFWALELVADRETREPLAPYGASSAAMAAVKAACKERGLL-PFV---NG-NRIHVVP-PCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred cccEEEEEEcccccccCCCcccchhhHHHHHHHHHHHHCCcE-Eee---cC-CEEEEEC-CccCCHHHHHHHHHHHHHHH
Confidence 2224444443111 00 00 0012456788888888844 332 12 4799987 66789999999999999998
Q ss_pred HHHH
Q 041829 477 SALL 480 (486)
Q Consensus 477 ~~l~ 480 (486)
+++.
T Consensus 444 ~~~~ 447 (451)
T PRK06062 444 AVAD 447 (451)
T ss_pred HHhh
Confidence 7654
No 323
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.50 E-value=8.4e-12 Score=120.38 Aligned_cols=220 Identities=18% Similarity=0.147 Sum_probs=156.6
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh--
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA-- 187 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s-- 187 (486)
..|....+|.. ++++-|.+. .+.+++|..|...++..... .++.|++....+.-
T Consensus 75 ~nPt~~~le~~----iaal~ga~~---------~l~fsSGmaA~~~al~~L~~-----------~g~~iV~~~~~Y~gT~ 130 (409)
T KOG0053|consen 75 GNPTRDVLESG----IAALEGAAH---------ALLFSSGMAAITVALLHLLP-----------AGDHIVATGDVYGGTL 130 (409)
T ss_pred CCCchHHHHHH----HHHHhCCce---------EEEecccHHHHHHHHHHhcC-----------CCCcEEEeCCCcccHH
Confidence 45777778877 899998765 57777777677666664442 55566666555543
Q ss_pred --HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 188 --LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 188 --~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
+.+....+|+ +...++++ |++.+++++++.+ .+|.+..|+||++.+-||++|+++|+++|+.
T Consensus 131 ~~l~~~~~~~gi---e~~~vd~~-------~~~~~~~~i~~~t------~~V~~ESPsNPll~v~DI~~l~~la~~~g~~ 194 (409)
T KOG0053|consen 131 RILRKFLPKFGG---EGDFVDVD-------DLKKILKAIKENT------KAVFLESPSNPLLKVPDIEKLARLAHKYGFL 194 (409)
T ss_pred HHHHHHHHHhCc---eeeeechh-------hHHHHHHhhccCc------eEEEEECCCCCccccccHHHHHHHHhhCCCE
Confidence 4445556788 76666544 6777888887744 5899999999999999999999999999999
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc--ceEEEEeCchHHHHHhcCCcccccccccccCCccC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD--CSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVD 343 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~--~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~ 343 (486)
++||.++++.+. ++.+.. +||+++-+.-||+++-.. .|.+..+..+...+..... .+
T Consensus 195 vvVDnTf~~p~~-~~pL~l------GADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~-~~------------- 253 (409)
T KOG0053|consen 195 VVVDNTFGSPYN-QDPLPL------GADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQ-ED------------- 253 (409)
T ss_pred EEEeCCcCcccc-cChhhc------CCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHH-HH-------------
Confidence 999999988743 322221 699999999999987643 5666665454443322111 11
Q ss_pred CCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEe
Q 041829 344 YKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVV 399 (486)
Q Consensus 344 ~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~ 399 (486)
++.-..++.+|..+| |.+-+.-+++++.+++..+.+.|++.|.++-+
T Consensus 254 -------lg~~~~p~~~~ll~R--glktl~lRi~~~~ena~~~A~~Le~~~~v~kv 300 (409)
T KOG0053|consen 254 -------LGWCEDPFDLFLLSR--GLKTLHLRINKHSENALKIALLLEAHPKVKKV 300 (409)
T ss_pred -------hcCCCCHHHHHHHhc--CcchhhhhHHHHHHHHHHHHHHhhhCCceeEE
Confidence 222335566666665 45666678889999999999999999988743
No 324
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.50 E-value=9.2e-11 Score=119.48 Aligned_cols=315 Identities=13% Similarity=0.097 Sum_probs=178.9
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHHHh
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQIG 195 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~~ 195 (486)
.+.++.+.|+++++.+.+ ..+|++||||||..|+..||... ++..|+. ....|-...-+....
T Consensus 97 ~~~~lae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~a~s~~ 160 (457)
T PRK05639 97 RAIRVAEKLAEISPIENP-------KVLFGLSGSDAVDMAIKVSKFST---------RRPWILAFIGAYHGQTLGATSVA 160 (457)
T ss_pred HHHHHHHHHHhhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHHHc
Confidence 344455668887753322 48999999999999999998642 3333444 444565544444333
Q ss_pred CC--------C--CCCeEEEeCCCCCCCc--------cCHHH--------HHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 196 GI--------H--PQNFRVLKTDSSTNYS--------LSPDS--------LAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 196 g~--------g--~~~v~~v~~~~~~~~~--------id~~~--------L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
|. + ..+++.+|.... ++ -|++. |++.+......+..+.+|++.......|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~ 238 (457)
T PRK05639 161 AFQSSQKRGFSPLMPNVVWIPYPNP--YRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIV 238 (457)
T ss_pred CCCcccccCCCCCCCCceEeCCCcc--ccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCc
Confidence 21 1 123555655321 11 13333 333332211123446677777666666776
Q ss_pred CC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhc
Q 041829 250 DP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLS 325 (486)
Q Consensus 250 d~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~ 325 (486)
-| +++|.++|++||+++++|+++.|+.-...-+.....++ ..|.+++ -|.++..++.|+++.++.- . +.+.
T Consensus 239 ~p~~~yl~~l~~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~pi~av~~~~~i-~-~~~~ 313 (457)
T PRK05639 239 VPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGKWFASEWFEV-KPDLIIF--GKGVASGMGLSGVIGRKEL-M-DLTS 313 (457)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEechhhccCcCchHHHHHhcCC-CCCEEEe--chhhcCCCcceeEEehHHH-H-hhcC
Confidence 54 89999999999999999999886432211111111234 5798885 6988766778888876532 2 2111
Q ss_pred CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCeEEecC--C
Q 041829 326 TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD-LRFEVVTP--R 402 (486)
Q Consensus 326 ~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~~--~ 402 (486)
..+.. +. .+.+....++.++++.+..+ ..+++..++.++|++.|+++ .++.++.+ -
T Consensus 314 --~~~~~---------------T~-~g~p~~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~VrG 372 (457)
T PRK05639 314 --GSALL---------------TP-AANPVISAAAEATLEIIEEE---NLLKNALKVGEFIKKRLLEMKESFEVIGDVRG 372 (457)
T ss_pred --CCccc---------------CC-CcCHHHHHHHHHHHHHHHHc---cHHHHHHHHHHHHHHHHHHHHHhCCCEEeecc
Confidence 01110 11 11122223334445554333 34566667888888888763 12222221 1
Q ss_pred CceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 403 ~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
...++.+.+...... ........+.+.+.++| +++.+... +..++|+.. ....|++|||.++++|+++.+++.
T Consensus 373 ~Gl~~gve~~~~~~~--~~~~~~~~~~~~~~~~G-v~~~~~g~-~~~~lr~~P-pl~it~~~id~~~~~l~~~l~~~~ 445 (457)
T PRK05639 373 KGLMIGVEIVKENGK--PDPELTGKICWRAFELG-LILPSYGM-FGNVIRITP-PLVITKEIAEKGLEIMERAIKDAL 445 (457)
T ss_pred ceeEEEEEEecCCCC--CCHHHHHHHHHHHHhCC-eEEeecCC-CCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHH
Confidence 223444444321100 02344567888888888 44443311 135899998 788999999999999999988764
No 325
>PLN00144 acetylornithine transaminase
Probab=99.50 E-value=5.2e-11 Score=119.05 Aligned_cols=302 Identities=13% Similarity=0.069 Sum_probs=167.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccC----C-CCeEEEecCCCchhHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNS----L-EKLVVYASDQTHSALQK 190 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~----~-~~~~v~~s~~~H~s~~~ 190 (486)
+.+.++.+.|+++.+.+ ..+|+++||||+..|+..||.....+....+ . +..+|......|-...-
T Consensus 57 ~~~~~la~~l~~~~~~~---------~v~f~~sGseA~e~AlklAr~~~~~~~~~~~~~~~~~r~~ii~~~~~yHG~t~~ 127 (382)
T PLN00144 57 IPQVELAKRLVASSFAD---------RVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSATEFVSFSNSFHGRTLG 127 (382)
T ss_pred HHHHHHHHHHHhcCCCC---------eEEEeCCcHHHHHHHHHHHHHHHhccCCCCccccccccceEEEECCCcccccHH
Confidence 34455555677766432 3899999999999999999875321100000 0 12234445555655444
Q ss_pred HHHHhCCC---------CCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc--CC--hHHHHH
Q 041829 191 ACQIGGIH---------PQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--DP--LLALGN 257 (486)
Q Consensus 191 a~~~~g~g---------~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--d~--l~~I~~ 257 (486)
+....+-. ...+..+|. -|+++|++.++. ..+.+|++.-..++.|.+ ++ +++|.+
T Consensus 128 ~~s~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~~~~-----~~~aavi~eP~q~~gg~~~~~~~~~~~l~~ 195 (382)
T PLN00144 128 ALALTSKEQYRTPFEPLMPGVTFVEY-------GNLEAARKLIQK-----GKTAAVFVEPVQGEGGIYPATKEFLQGLRA 195 (382)
T ss_pred HHhcCCCccccccCCCCCCCeEEeCC-------CCHHHHHHhcCC-----CCeEEEEEccccCCCCCccCCHHHHHHHHH
Confidence 44333221 011222322 178999888742 235566666555554444 34 899999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQ 337 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~ 337 (486)
+|++||+++++|.++.++.....-+.....++ ..|.+++ -|.++..+.+|+++.+.. +.+.+... .+ .
T Consensus 196 l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~PDi~t~--sK~l~~G~pig~v~~~~~--~~~~~~~~-~~--~---- 263 (382)
T PLN00144 196 LCDEAGALLVFDEVQCGLGRTGYLWAHEAYGV-EPDIMTL--AKPLAGGLPIGAVLVTEK--VASAINPG-DH--G---- 263 (382)
T ss_pred HHHHcCCEEEEechhhCCCccchHhhhhhcCC-CCCEEEe--cccccCCcceEEEEEcHH--HHhccCCC-CC--C----
Confidence 99999999999999987543221111112233 3575554 699976677899888643 22222110 00 0
Q ss_pred cCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHH----HhcCCCeEEecCCCceEEEEEecC
Q 041829 338 ANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGL----VAQDLRFEVVTPRIFSLVCFRLLP 413 (486)
Q Consensus 338 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~----l~~~~~~~~~~~~~~~~v~f~~~~ 413 (486)
.+. .+.+.....+.++++.+-...+. ++..++.+++.+. +.+.|.+.-+.. ...++.+.+..
T Consensus 264 ---------~T~-~~~pl~~aaa~a~l~~i~~~~~~---~~~~~~g~~l~~~l~~~~~~~~~~~~vrg-~G~~~~l~l~~ 329 (382)
T PLN00144 264 ---------STF-AGGPLVCNAALAVLDKISKPGFL---ASVAKKGEYLRELLRRKLGGNPHVKEVRG-VGLLVGIQLDV 329 (382)
T ss_pred ---------CCC-CCCHHHHHHHHHHHHHHhhchHH---HHHHHHHHHHHHHHHHHHhhCCCceeeec-CceEEEEEecC
Confidence 011 11122233444455665433333 3444444444444 444543322212 33344555521
Q ss_pred CCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 414 PHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 414 ~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
. ...+...+.+.|.. +.+... ..++|+++ ....++++++.+++.|.+++.+
T Consensus 330 --------~--~~~~~~~~~~~Gv~-i~~~~~--~~~lrl~p-~~~~~~~~i~~~~~~l~~~l~~ 380 (382)
T PLN00144 330 --------P--AGPLVDACRDSGLL-VLTAGK--GDVVRLVP-PLVISEAELEQAVEILADCLPA 380 (382)
T ss_pred --------c--cHHHHHHHHHCCeE-EeecCC--CCEEEEeC-CCccCHHHHHHHHHHHHHHHHh
Confidence 0 14577778888844 443311 26899998 5557899999999999988754
No 326
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.49 E-value=2.7e-11 Score=122.98 Aligned_cols=308 Identities=13% Similarity=0.108 Sum_probs=172.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
..+.++.+++++++.... ..++++|||+||..|+..++... + +..+|......|-...-+....
T Consensus 90 ~~~~~la~~L~~~~~~~~--------~v~~~~sGseA~e~Aik~a~~~~-------g-~~~ii~~~~~yHG~t~~~~~~~ 153 (426)
T PRK00062 90 ELEVELAELVIELVPSIE--------MVRMVNSGTEATMSAIRLARGYT-------G-RDKIIKFEGCYHGHADSLLVKA 153 (426)
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEecCHHHHHHHHHHHHHHHh-------C-CCeEEEEcCccCCchhhhhhcc
Confidence 444566666887763122 37999999999999999988752 0 2233444444565432222221
Q ss_pred CC-----CCC----CeE-----EEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHH
Q 041829 196 GI-----HPQ----NFR-----VLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGN 257 (486)
Q Consensus 196 g~-----g~~----~v~-----~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ 257 (486)
|- +.. ..+ .+.+. .-|+++|++.+++. +..+.+|++.......|.+-| +++|.+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~i~~~---~~~~aaiivEpv~~~~G~~~~~~~~l~~l~~ 225 (426)
T PRK00062 154 GSGAATLGLPDSPGVPEDFAKHTLTAP-----YNDLEAVEELFEEY---GDEIAAVIVEPVAGNMGVVPPKPGFLEGLRE 225 (426)
T ss_pred CccccccCCCCCCCCCcccccceEEcC-----CCCHHHHHHHHHhC---CCcEEEEEEeCCcCCCCCcCCCHHHHHHHHH
Confidence 11 000 000 01111 13889999988642 234567788877778899988 999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCC-ccccccccc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTN-PEFLKNKAS 336 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~-~~yl~~~~~ 336 (486)
+|++||+++++|++|.|+ .....+.....++ ..|.++ ..|.++..+..|+++.++ + +.+.+... ..+..
T Consensus 226 l~~~~~~llI~DEv~~G~-r~g~~~~~~~~~~-~pDi~~--~gK~l~~G~p~ga~~~~~-~-i~~~~~~~~~~~~~---- 295 (426)
T PRK00062 226 LCDEHGALLIFDEVMTGF-RVALGGAQGYYGV-TPDLTT--LGKIIGGGLPVGAFGGRR-E-IMEQLAPLGPVYQA---- 295 (426)
T ss_pred HHHHcCCEEEEeechhcc-ccCCccHHHHhCC-CcchHh--hhhHhhCCCcceeeeEHH-H-HHHhhccCCCceec----
Confidence 999999999999999865 2221111111122 246544 458887655577776643 3 33333211 11111
Q ss_pred ccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEec
Q 041829 337 QANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLL 412 (486)
Q Consensus 337 ~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~ 412 (486)
+..++.+....++.++++.+..+ +..++..++.+++++.|++ + ++..-......++.+.+.
T Consensus 296 -----------~T~~~~p~~~aaa~a~L~~~~~~---~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~vrg~G~~~~i~l~ 360 (426)
T PRK00062 296 -----------GTLSGNPLAMAAGLATLKLLKEP---GFYEELEALTKRLAEGLKEAAKKA-GIPLTVNRVGSMFGLFFT 360 (426)
T ss_pred -----------ccCcCCHHHHHHHHHHHHHHhcc---hHHHHHHHHHHHHHHHHHHHHHHc-CCceEEEEecceEEEEEe
Confidence 00112222333445556655333 3556666677777777653 4 333211233445555554
Q ss_pred CCCCC-----cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 413 PPHND-----EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 413 ~~~~~-----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.... ..........+.+.+.++| +++.+... ..++++ ...|++||+++++.|+++..++
T Consensus 361 ~~~~~~~~~~~~~~~~~~~~i~~~l~~~G-v~v~~~~~---~~~~~~---~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 361 DEPVTNYADAKKSDTERFARFFHAMLDEG-VYLAPSQF---EAGFVS---AAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred cCCCcchhhhccccHHHHHHHHHHHHHCC-eEeecCCc---Cceeee---ccCCHHHHHHHHHHHHHHHHhh
Confidence 21100 0001233457888888888 55554322 245554 4669999999999999887654
No 327
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.49 E-value=1.5e-10 Score=118.00 Aligned_cols=319 Identities=13% Similarity=0.086 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
.+...++.+.+++++..... ...+|+++||+|+..|+..||... ++..|+. ...-|-...-+..
T Consensus 98 ~~~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~al~ 162 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHE------KRSALFNSGAEAVENAVKIARSYT---------GRQAVVVFDHAYHGRTNLTMA 162 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEECCCcCcChHHHHh
Confidence 34555666778888753211 137899999999999999998752 2333443 4445655444443
Q ss_pred HhCC--------C--CCCeEEEeCCC-CCC---CccCH-HHHHHHHH---HHHhCCCccEEEEEecCCccccccCC----
Q 041829 194 IGGI--------H--PQNFRVLKTDS-STN---YSLSP-DSLAEAIS---RDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 194 ~~g~--------g--~~~v~~v~~~~-~~~---~~id~-~~L~~~i~---~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
+.+. + ...+..+|... ..+ ...+. +.+++.++ +.. .+..+.+|++.-.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-~~~~iAavi~EPi~g~gG~~~p~~~y 241 (443)
T PRK06058 163 LTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV-GADNLAAVIIEPIQGEGGFIVPAEGF 241 (443)
T ss_pred hcCCCcccccccCCCCCCceEcCCCcccccccccccchHHHHHHHHHHHHHhh-CCCceEEEEECCccCCCCCcCCCHHH
Confidence 3221 1 11334444211 000 01111 22222222 211 1234566776665555666654
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
+++|.++|++||+.+++|+.+.|+......+.....++ ..|.+++. |.++..++.|+++.+++ +.+.+... ..
T Consensus 242 l~~lr~lc~~~gillI~DEV~tGfgRtG~~fa~~~~gv-~PDiv~~g--K~l~~G~Pi~av~~~~~--i~~~~~~~--~~ 314 (443)
T PRK06058 242 LPALLEWCRENGVVFIADEVQTGFARTGAWFACEHEGI-VPDLITTA--KGIAGGLPLSAVTGRAE--IMDAPHPG--GL 314 (443)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcChhhhHHHhcCC-CCCEEEEc--ccccCCCccEEEEEcHH--HHhhccCC--CC
Confidence 99999999999999999999877532211111111233 46888885 98876677888888653 22222110 00
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCceEEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVT--PRIFSLVC 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~--~~~~~~v~ 408 (486)
. .+. .+.+....++.++++.+..+ ++.++..++.++|.+.|+++. ...++. .....++.
T Consensus 315 ~--------------~T~-~gnpl~~aaa~a~L~~~~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrg~G~~~~ 376 (443)
T PRK06058 315 G--------------GTY-GGNPVACAAALAAIETIEED---DLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIA 376 (443)
T ss_pred C--------------CCC-CCCHHHHHHHHHHHHHHHHc---CHHHHHHHHHHHHHHHHHHHHhhCCcEEeeeccceEEE
Confidence 0 011 12122223344444444333 455667777888888886631 122211 23334555
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
+.+...... ....+...++...+.++| +++.+....+ .++|+.. ....|++||++++++|++++++
T Consensus 377 i~~~~~~~~-~~~~~~~~~l~~~~~~~G-v~~~~~~~~~-~~lr~~P-pl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 377 IELVKPGTT-EPDAELTKALAAAAHAAG-VIVLTCGTYG-NVIRLLP-PLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred EEEecCCCC-CCcHHHHHHHHHHHHHCC-eEEeccCCCC-CEEEEEC-CCccCHHHHHHHHHHHHHHHHh
Confidence 555322100 011234567788888888 4444321112 4899987 6788999999999999988764
No 328
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.49 E-value=6.5e-11 Score=120.28 Aligned_cols=325 Identities=16% Similarity=0.151 Sum_probs=177.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.+++++.-+.+ ..+|+++||||+..|+..||...... +.. .+..|+ .....|-...-+...
T Consensus 89 ~~~~~la~~l~~~~p~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~gals~ 158 (442)
T PRK13360 89 PKAFELANRIAEIAPGGLN-------HVFFTNSGSESVDTALKIALAYHRAR-GEG--SRTRLIGRERGYHGVGFGGISV 158 (442)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEEcCCcCCccHhhhhc
Confidence 3445566668887731111 37999999999999999999753111 100 123343 344445443333222
Q ss_pred hCC-------C--CCCeEEEeCCCC--C-CCcc--------CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---
Q 041829 195 GGI-------H--PQNFRVLKTDSS--T-NYSL--------SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP--- 251 (486)
Q Consensus 195 ~g~-------g--~~~v~~v~~~~~--~-~~~i--------d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~--- 251 (486)
.|. + ...+..+|.... . .+.- ..++|+++++.. .+..+.+|++.......|.+-|
T Consensus 159 tg~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~--~~~~~aavivEpi~g~~G~~~~~~~ 236 (442)
T PRK13360 159 GGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLH--DASTIAAVIVEPVAGSTGVLIPPKG 236 (442)
T ss_pred cCChhhhhccCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHH
Confidence 221 1 112344444311 0 0100 245777777532 1234667888877778899988
Q ss_pred -hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCcc
Q 041829 252 -LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 -l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.++.. .++|.++.+++ +.+.+...+.
T Consensus 237 fl~~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDivt~--gK~l~gG~~P~gav~~~~~--i~~~~~~~~~ 311 (442)
T PRK13360 237 YLQRLREICDKHGILLIFDEVITGFGRLGAPFAAQYFGV-TPDLLTC--AKGLTNGAIPMGAVFVSSE--IHDAFMQGPE 311 (442)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCC-CCceeee--eeccccCccceEEEEEcHH--HHHHhhcCCc
Confidence 99999999999999999999865432211111111233 4687766 5888643 34677777653 2233322110
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCC--ceEE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRI--FSLV 407 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~--~~~v 407 (486)
... .-+...+. .+.+.....+.++++.+-.++ +.++..++.++|++.|+++..+..+.+.. ..++
T Consensus 312 ~~~---------~~~~~~T~-~g~pl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~ 378 (442)
T PRK13360 312 AGI---------EFFHGYTY-SGHPLACAAALATLDLYEREG---LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVG 378 (442)
T ss_pred ccc---------ccccCCCC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEE
Confidence 000 00000111 122223334445566554443 55677778888888887653222221111 1122
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.+.+.+.... ......++..++.++| +++... + ..+|++. ....|++|||+++++|.++.+++
T Consensus 379 ~~~l~~~~~~---~~~~~~~~~~~l~~~G-vl~~~~---~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 379 AVELAPRDGK---PGKRAYEVFLKCFEKG-LMIRYT---G-DILALSP-PLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred EEEEecCCCC---cchhHHHHHHHHHHCC-cEEEec---C-CEEEEeC-CCccCHHHHHHHHHHHHHHHHHh
Confidence 3333221100 1123356777888888 444332 2 4799998 77889999999999999988654
No 329
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=99.48 E-value=1.2e-12 Score=125.69 Aligned_cols=265 Identities=18% Similarity=0.228 Sum_probs=177.4
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH--hCccC-----CCCeEEEecCCCch
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR--VGKNS-----LEKLVVYASDQTHS 186 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~--~~~~~-----~~~~~v~~s~~~H~ 186 (486)
+.-+.-.+-+|+..+|.+.++.-+.......|..+-..++.-++..|....++. .-+.+ ...+++|+|+..|.
T Consensus 163 an~i~Gdanh~fgnLF~FAdsqiycsdPaasfhadiadai~haVkLAikar~~~dhs~eG~~afaa~aaPt~YiS~alh~ 242 (838)
T KOG0630|consen 163 ANSISGDANHVFGNLFHFADSQIYCSDPAASFHADIADAIGHAVKLAIKARCGGDHSLEGGIAFAALAAPTFYISEALHM 242 (838)
T ss_pred HHhhccchHHHHHHHHhhcccccccCCchhhhhhhhhhHHHHHHHhhhhhccCCccccccccchHhhcCceEEEcccccH
Confidence 344555577889999988764211111112222211222333333332221111 00011 24678999999997
Q ss_pred hH-HHHHHHhCCCCCCeEEEeCCCC-C--CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 187 AL-QKACQIGGIHPQNFRVLKTDSS-T--NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 187 s~-~~a~~~~g~g~~~v~~v~~~~~-~--~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-. ..+|+-+|+....+..++ +.+ + .++||...+++.|+++..+|++|.++++..|++-.|..|.|-+|.+||+++
T Consensus 243 ~l~hYaarefGIa~~aI~~~~-dhdqgeiegriDhh~feKiideDlaagkkPLilia~iGasi~GqnDmi~kildi~eah 321 (838)
T KOG0630|consen 243 DLLHYAAREFGIADEAIKPIL-DHDQGEIEGRIDHHLFEKIIDEDLAAGKKPLILIADIGASICGQNDMILKILDICEAH 321 (838)
T ss_pred HHHHHHHHHhCCchhheeccc-ccccccccccccHHHHHHHHHHHHhCCCCCeEEEEeccchhhcchHHHHHHHHHHHHh
Confidence 64 458899999543333333 322 1 259999999999999999999999999999999999999999999999999
Q ss_pred C-CEEEeeccccchhccCccchhccc-CCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCC
Q 041829 263 G-MWFHVDAAYAGSACICPEYRQYID-GVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANM 340 (486)
Q Consensus 263 g-~~lhvD~A~g~~~~~~~~~~~~~~-~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~ 340 (486)
+ +|+|.-| ++-.++.|.+.....- -.+..||++++.--|++.|..--+++-|.-. +|-....
T Consensus 322 akfWLHasG-haiAALt~aepnnil~HV~eqldSMal~ialWLGiPSaPiV~LHRPle----------g~aaSaf----- 385 (838)
T KOG0630|consen 322 AKFWLHASG-HAIAALTCAEPNNILGHVEEQLDSMALNIALWLGIPSAPIVLLHRPLE----------GSAASAF----- 385 (838)
T ss_pred hheeEeecc-chhhheeecCcccchhHHHHHHhhccchhHHHhCCCCCceEEeecccc----------cccchhc-----
Confidence 7 9999886 2223333433222211 1357899999999999999644444444321 1100000
Q ss_pred ccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec
Q 041829 341 VVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT 400 (486)
Q Consensus 341 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~ 400 (486)
+--.-..++..++++|.+++++|...+.++++....+.+.+.+.+.+.++++++.
T Consensus 386 -----esdpi~rekLdaLp~Wta~q~LggKaIadmienAFll~kilfe~aSa~~eiemig 440 (838)
T KOG0630|consen 386 -----ESDPILREKLDALPLWTALQALGGKAIADMIENAFLLCKILFEGASACEEIEMIG 440 (838)
T ss_pred -----ccChHHHHhhccchHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhcCCceeEec
Confidence 0011256678999999999999999999999999999999999999999999875
No 330
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.48 E-value=4.4e-10 Score=113.72 Aligned_cols=320 Identities=13% Similarity=0.036 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+...++.+.+++++.-+.. ...+|+++||||+..|+..||... ++..|+ .....|-...-+..
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~v~f~~SGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~~ 146 (425)
T PRK07495 82 YENYVRLAERLNALVPGDFA------KKTIFVTTGAEAVENAVKIARAAT---------GRSAVIAFGGGFHGRTFMGMS 146 (425)
T ss_pred CHHHHHHHHHHHHhCCCCCC------CEEEECCchHHHHHHHHHHHHHhh---------CCCeEEEECCCcCCccHHHhh
Confidence 34445566668887742210 148999999999999999998752 233344 34445644333332
Q ss_pred HhCC--------C--CCCeEEEeCCCCCCCccC----HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHH
Q 041829 194 IGGI--------H--PQNFRVLKTDSSTNYSLS----PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLAL 255 (486)
Q Consensus 194 ~~g~--------g--~~~v~~v~~~~~~~~~id----~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I 255 (486)
+.|. + ...++.+|.+... ..++ .+++++.++.. ..+..+.+|++.-.....|.+.+ +++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~l~~~~~~~-~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l 224 (425)
T PRK07495 147 LTGKVVPYKVGFGAMMPDVYHVPFPVEL-HGVSVEQSLAALDKLFKAD-VDPQRVAAIIIEPVQGEGGFYPAPAAFMKAL 224 (425)
T ss_pred hcCCCcccccCCCCCCCCeEEecCCccc-ccccHHHHHHHHHHHHHhc-cCCCceEEEEECCccCCCCCccCCHHHHHHH
Confidence 2221 1 1134556654321 1233 33445555321 12234667777766666775533 8999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccc
Q 041829 256 GNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 256 ~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
.++|++||+++++|.++.|+.....-+.....++ ..|.+++ -|.++..+.+|+++.+.+ +.+.+.. ....
T Consensus 225 ~~l~~~~g~llI~DEv~tG~gr~G~~~a~~~~gv-~pDi~tl--sK~l~~G~pigav~~~~~--i~~~~~~--~~~~--- 294 (425)
T PRK07495 225 RELCDQHGILLIADEVQTGFARTGKLFAMEHHEV-AADLTTM--AKGLAGGFPLAAVTGRAE--IMDAPGP--GGLG--- 294 (425)
T ss_pred HHHHHHcCCEEEEechhhcCCcCCCceeecccCC-CCCEEee--hhhhcCCccceEEEEcHH--HHhccCC--CCcC---
Confidence 9999999999999999986432211110001122 3576665 588876667888887642 2222211 0000
Q ss_pred cccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEe
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRL 411 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~ 411 (486)
.+. .+.+.......++++.+..+ ++.++..++.++|++.|++ .|.+.-+.. ...++.+.+
T Consensus 295 -----------~T~-~~~pl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG-~Gl~~~iel 358 (425)
T PRK07495 295 -----------GTY-GGNPLGIAAAHAVLDVIEEE---DLCERANQLGNRLKQRLASLRETVPEIADIRG-PGFMNAVEF 358 (425)
T ss_pred -----------CCC-CCCHHHHHHHHHHHHHHHhc---hHHHHHHHHHHHHHHHHHHHHhhCCCeeeeec-CceEEEEEE
Confidence 011 12122222333555555333 3445566666777666654 333211111 133455555
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+..... ........+...+.++|. ++...... ..++|+.. ....|++++|+++++|+++.+++.+
T Consensus 359 ~~~~~~~-~~~~~~~~~~~~~~~~Gv-l~~~~g~~-~~~~r~~P-pl~it~~~id~~~~~l~~~l~~~~~ 424 (425)
T PRK07495 359 NDADSGL-PSAEFANRVRLKALEKGL-ILLTCGVH-GNVIRFLA-PITIQDDVFAEALDILEASILEASA 424 (425)
T ss_pred ecCCCCC-ccHHHHHHHHHHHHHCCe-EEeecCCC-CCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 4321100 012345678888888884 44332222 25899988 7788999999999999999887653
No 331
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.47 E-value=2.3e-10 Score=116.10 Aligned_cols=315 Identities=14% Similarity=0.100 Sum_probs=171.2
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG 196 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g 196 (486)
-+.++.+.|++++.-... ...+|+++||+|+..|+..||... | ++.+|.....-|-...-+....|
T Consensus 77 ~~~~la~~l~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~~~~~~~ 142 (420)
T TIGR00700 77 GYVALAEKLNRIAPGSGP------KKSVFFNSGAEAVENAVKIARSYT-------G-RPGVVAFDHGFHGRTNMTMALTA 142 (420)
T ss_pred HHHHHHHHHHHhCCCCCC------CEEEEeCCcHHHHHHHHHHHHHhc-------C-CCcEEEECCCcCCCcHHHHHhcC
Confidence 344455557777632110 147999999999999999998752 1 22234345555655444443322
Q ss_pred --------CC--CCCeEEEeCCCCC---------CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hH
Q 041829 197 --------IH--PQNFRVLKTDSST---------NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LL 253 (486)
Q Consensus 197 --------~g--~~~v~~v~~~~~~---------~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~ 253 (486)
.+ ...+..+|..... .+.-+++.+++.+... ..+..+.+|++.-....+|.+-| ++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~iAavi~Epi~g~~G~~~~~~~~l~ 221 (420)
T TIGR00700 143 KVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVID-VGANNVAALVIEPVQGEGGFIVPAKGFVP 221 (420)
T ss_pred CCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhh-cCCCcEEEEEECCccCCCCCccCCHHHHH
Confidence 11 1134444442100 0011245666666421 12334677777777777788765 89
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccc
Q 041829 254 ALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKN 333 (486)
Q Consensus 254 ~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~ 333 (486)
+|.++|++||+++++|..+.++.....-+.....++ ..|.++ .-|.++..+..|+++.+.+ +.+.+... ...
T Consensus 222 ~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~-~pDi~~--lsK~l~~G~pig~v~~~~~--i~~~~~~~--~~~- 293 (420)
T TIGR00700 222 ALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGP-EPDLIT--TAKSLADGLPLSGVTGRAE--IMDAPAPG--GLG- 293 (420)
T ss_pred HHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCC-CCCEEE--eeccccCCcceEEEEecHH--HHhhcCCC--CcC-
Confidence 999999999999999999987543221110001122 467666 5698886677888887642 22222110 000
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHh----cCCCeEEecCCCceEEEE
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVA----QDLRFEVVTPRIFSLVCF 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~----~~~~~~~~~~~~~~~v~f 409 (486)
.+. ++.+.....+.++++.+..+.+.+ +..++.+++++.|+ ++|.+.-+ .+...++.+
T Consensus 294 -------------~T~-~~~pl~~aaa~a~l~~l~~~~~~~---~~~~~g~~l~~~L~~l~~~~~~~~~v-rg~G~~~~i 355 (420)
T TIGR00700 294 -------------GTY-AGNPLACAAALAVLAIIESEGLIE---RARQIGRLVTDRLTTLKAVDPRIGDV-RGLGAMIAV 355 (420)
T ss_pred -------------CCC-CcCHHHHHHHHHHHHHHHhccHHH---HHHHHHHHHHHHHHHHHhhCCCEEEe-eccceEEEE
Confidence 011 111222223333455544444433 33444444554444 44444333 233445556
Q ss_pred EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.+..... .........++.+.+.++|........+ + .++|+++ ....+++++++++++|.+++
T Consensus 356 ~~~~~~~-~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-~-~~lRl~p-~l~~~~~~l~~~~~~l~~~l 418 (420)
T TIGR00700 356 ELVDPGT-TEPDAGLAERIATAAHAAGLLLLTCGMF-G-NIIRFLP-PLTIGDELLSEGLDILCAIL 418 (420)
T ss_pred EEecCCC-CCccHHHHHHHHHHHHHCCeEEeccCCC-C-CEEEEEC-CCCcCHHHHHHHHHHHHHHh
Confidence 5532110 0012345567777788888544332222 2 5899997 55578999999999998875
No 332
>PRK07678 aminotransferase; Validated
Probab=99.47 E-value=3.8e-10 Score=115.13 Aligned_cols=327 Identities=14% Similarity=0.112 Sum_probs=177.1
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.|+++++... ..+|++|||+|+..|+..||..... .+.. ++..|+ .....|-...-+...
T Consensus 89 ~~~~~lae~l~~~~~~~~--------~v~f~~sGseA~e~AlklAr~~t~~-~g~~--~r~~ii~~~~~yHG~t~~als~ 157 (451)
T PRK07678 89 EPAIKLAEKLNEWLGGEY--------VIFFSNSGSEANETAFKIARQYHAQ-KGEP--HRYKFISRYRAYHGNSMGALAA 157 (451)
T ss_pred HHHHHHHHHHHHhCCCCC--------EEEEeCCcHHHHHHHHHHHHHHHHh-cCCC--CCcEEEEECCCcCCccHHHhhc
Confidence 344556666888875432 3799999999999999999875311 1111 223343 344456544434333
Q ss_pred hCCC---------CCCeEEEeCCCCCCCcc---------CH---HHHHHHHHHHHhCCCccEEEEEecCCccccccCC--
Q 041829 195 GGIH---------PQNFRVLKTDSSTNYSL---------SP---DSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~~~~i---------d~---~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-- 251 (486)
.|.. ...+..+|... .++. |. +.+++.++.. .+..+.+|++.-.....|.+.|
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPiqg~gG~~~~~~ 233 (451)
T PRK07678 158 TGQAQRKYKYEPLAPGFLHVPPPD--CYRMPGIESEDIYDLECVKEIDRVMTWE--LSETIAAVIMEPIITGGGVLMPPQ 233 (451)
T ss_pred CCCcccccccCCCCCCCEEeCCCc--cccccccCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEccccCCCCcccCCH
Confidence 2210 11233444321 1111 12 2345555421 2334667777766666677755
Q ss_pred --hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCc
Q 041829 252 --LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNP 328 (486)
Q Consensus 252 --l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~ 328 (486)
++++.++|++||+.+++|+.+.|+.....-+.....|+ ..|.+++ -|.++.. .++|.++++++ +.+.+....
T Consensus 234 ~fl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~gv-~PDivt~--gK~lggG~~Pi~av~~~~~--i~~~~~~~~ 308 (451)
T PRK07678 234 DYMKAVKEICQKHGALLISDEVICGFGRTGKAFGFMNYGV-KPDIITM--AKGITSAYLPLSATAVKKE--IYEAFKGKG 308 (451)
T ss_pred HHHHHHHHHHHHcCCEEEEeehhhcCCcCchhHHHHhcCC-CCCEEEe--ecccccCCcceeEEEEcHH--HHHHHhccC
Confidence 89999999999999999999866533211111111233 4798887 4888765 36888888764 223332111
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCc
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIF 404 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~ 404 (486)
.+- .+...+.-.+.+....++.++++.+-.++ +.++..++.++|.+.|++ +|.+.-+ ....
T Consensus 309 ~~~-----------~~~h~~T~~gnp~~~aaa~a~l~~l~~~~---~~~~~~~~g~~l~~~l~~~~~~~~~v~~v-rg~G 373 (451)
T PRK07678 309 EYE-----------HFRHVNTFGGNPAACALALKNLEIMENEN---LIERSAQLGELLLEQLKEELGEHPLVGDI-RGKG 373 (451)
T ss_pred ccc-----------ccccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEE-Eeec
Confidence 000 00000001122222234444555554333 455666677777766643 3322111 1122
Q ss_pred eEEEEEecCCCCCcc-cchHHHHHHHHHHHccCcEEEEee---eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 405 SLVCFRLLPPHNDED-HGNKLNHKLLDDINSTGKIFISHT---VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 405 ~~v~f~~~~~~~~~~-~~~~~~~~l~~~l~~~g~~~~~~~---~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.++.+.+........ .......++...+.++|. ++.+. ...+...+|++. ....|++|||++++++.++++++
T Consensus 374 l~~~i~~~~~~~~~~~~~~~~a~~i~~~l~~~Gv-~~~~~g~~v~~~~~~lrl~P-pl~it~~eid~~~~~l~~~l~~~ 450 (451)
T PRK07678 374 LLVGIELVNDKETKEPADNDKVASVVAACKEKGL-IIGKNGDTVAGYNNVLTLSP-PLVISSEEIAFIVGTLKTALERI 450 (451)
T ss_pred eEEEEEEecCCcccCcCchHHHHHHHHHHHHCCc-EEeecCccccCCCCEEEEEC-CCcCCHHHHHHHHHHHHHHHHhc
Confidence 344444432110000 012345678888888984 44332 113346899998 77789999999999999888654
No 333
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.46 E-value=5.1e-11 Score=111.07 Aligned_cols=331 Identities=14% Similarity=0.088 Sum_probs=205.9
Q ss_pred ccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE---ecCC
Q 041829 107 SWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY---ASDQ 183 (486)
Q Consensus 107 ~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~---~s~~ 183 (486)
.|....-..++|.-+.+..-+.||++++.+ +..+-.-+||-||+.+-.+... +..+|. .++.
T Consensus 77 YYGGne~ID~iE~LCq~RALeaF~ldp~kW----GVNVQp~SGSPANfavYtall~-----------Ph~RiMGLDLP~G 141 (477)
T KOG2467|consen 77 YYGGNEYIDQIELLCQKRALEAFGLDPEKW----GVNVQPYSGSPANFAVYTALLK-----------PHERIMGLDLPSG 141 (477)
T ss_pred ccCcchHHHHHHHHHHHHHHHHhCCCHHHC----ceeeccCCCCchhhHHHhhhcC-----------CCCeeeeccCCCC
Confidence 344455678899988888999999988632 2344556889899876655443 333443 3555
Q ss_pred CchhHHHHHHHhCCCCC----CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHH
Q 041829 184 THSALQKACQIGGIHPQ----NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIA 259 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~----~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia 259 (486)
.|.|.--....-.+... +-....+|+. ++-||.|.||+.-..- +|.+|+ +|++.....-|...+.+||
T Consensus 142 GHLsHGy~T~~kkISa~SiyFeSmPYkv~~~-TG~IDYD~Le~~A~~f-----rPk~ii--aG~SaY~R~~DYaR~R~Ia 213 (477)
T KOG2467|consen 142 GHLSHGYQTPTKKISATSIYFESMPYKVDPS-TGYIDYDKLEKTATLF-----RPKLII--AGTSAYSRLIDYARFRKIA 213 (477)
T ss_pred CccccccccCCceeeeeeeecccCceeeCCC-CCceehHHHHHHHHhc-----CCcEEE--eccccchhhccHHHHHHHH
Confidence 66542211100011000 1112345554 4799999999875543 476665 4566666778899999999
Q ss_pred HHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHh-cCCccccccccccc
Q 041829 260 KSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSL-STNPEFLKNKASQA 338 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~-~~~~~yl~~~~~~~ 338 (486)
.+.|+++.+|-||-.+.+....... -.+.+|+++...||.|-+|. .|++++|+.-.-...- .....|- .
T Consensus 214 d~~gA~Lm~DMAHISgLVAA~vips---PFey~DiVTTTTHKsLRGPR-g~mIFyRkGvk~~~~k~g~~i~yd------l 283 (477)
T KOG2467|consen 214 DKVGAYLMADMAHISGLVAAGVIPS---PFEYCDIVTTTTHKSLRGPR-GAMIFYRKGVKSIKPKQGKEILYD------L 283 (477)
T ss_pred HhcCceeehhhhhHHHHHhcccCCC---cccccceeeccccccccCCc-ceeEEEeccCCcCCCCCCCcceec------h
Confidence 9999999999998766554322221 14589999999999999997 5777787632110000 0011221 1
Q ss_pred CCccCCCCC-ccCCCCCCCc-HHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCCceEEEEEecCCC
Q 041829 339 NMVVDYKDW-QIPLGRRFRS-LKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRIFSLVCFRLLPPH 415 (486)
Q Consensus 339 ~~~~~~~~~-~~~~sr~~~~-l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~~~~v~f~~~~~~ 415 (486)
....++..+ ++|+|.+-.. .++..+|+.-..-.|++..++...+++.|.+.|.+. |++++. -.+..+|.+.+.+.+
T Consensus 284 E~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~-Gy~lvtgGTDnHlvLvDLr~~G 362 (477)
T KOG2467|consen 284 EDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISR-GYKLVTGGTDNHLVLVDLRPKG 362 (477)
T ss_pred hhhhhhhccccccCCCCcchHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHc-CceEecCCccceEEEEeccccC
Confidence 112222222 4566666443 466778888888889999999999999999999998 999985 456678888888877
Q ss_pred CCcccchHHHHHHHHHH----HccCcEEEEeeeECCEeEEEEEe---cCCCCCHHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDI----NSTGKIFISHTVLSGKYILRFAV---GAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l----~~~g~~~~~~~~~~~~~~lRi~~---~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.+.... .++++.+ ++.. +.+....-..+.+|+.. ++....++|++++.+-|.+..+
T Consensus 363 ~dGarv----E~vle~~~I~~NKNt--vpGD~Sal~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 363 VDGARV----EKVLELCHIALNKNT--VPGDKSALSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred CchHHH----HHHHHHhhhhhcCCc--CCCCccccCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 543322 3344432 2221 11111111124688854 3334467888888887766543
No 334
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.46 E-value=2e-10 Score=116.77 Aligned_cols=326 Identities=16% Similarity=0.159 Sum_probs=176.2
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+...++.+.|++++.-+.+ ..+|+++||+|+..|+..||.....+ +.. .+..+|......|-...-+....
T Consensus 92 ~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~-~r~~ii~~~~~yHG~t~gals~~ 162 (445)
T PRK09221 92 PLAFELAERLAELAPGGLD-------HVFFTNSGSESVDTALKIALAYHRAR-GQG-TRTRLIGRERGYHGVGFGGISVG 162 (445)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCC-CCcEEEEECCCcCccchhhhccC
Confidence 3444555668887742211 47999999999999999998753211 100 02223444444564433333222
Q ss_pred CC-------C--CCCeEEEeCCC-C--CCCc--------cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 196 GI-------H--PQNFRVLKTDS-S--TNYS--------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 196 g~-------g--~~~v~~v~~~~-~--~~~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
|. + ...+..+|... . ..+. -..++|++.++.. ....+.+|++.......|.+.|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAavi~Epv~g~~G~~~~~~~y 240 (445)
T PRK09221 163 GIVNNRKMFGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALH--DASTIAAVIVEPMAGSAGVLVPPKGY 240 (445)
T ss_pred CChhhhhccCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEecccCCCCcccCCHHH
Confidence 21 0 01233444321 0 0000 0135666666532 1134667888877888899988
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
+++|.++|++||+++++|+++.|+.....-+.....++ ..|.++++ |.++.. ++.|.++.+++ +.+.+...+.+
T Consensus 241 l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~~~~~~gv-~PDi~~~g--K~l~gG~~Pi~av~~~~~--i~~~~~~~~~~ 315 (445)
T PRK09221 241 LQRLREICDKHGILLIFDEVITGFGRLGAAFAAERFGV-TPDIITFA--KGLTNGAIPMGAVIASDE--IYDAFMQGPEY 315 (445)
T ss_pred HHHHHHHHHHcCCEEEEeehhhCCCcCchhhHHHhcCC-CCCEEEec--cccccCcccceeeEEcHH--HHHhhccCccc
Confidence 99999999999999999999876432111111111123 35877664 777533 23666766543 23333221111
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC--CceEEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR--IFSLVC 408 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~--~~~~v~ 408 (486)
.... ....+.. +.+.....+.++++.+-.+ .++++..++.++|++.|+++.++..+.+. ..-+..
T Consensus 316 ~~~~---------~~~~T~~-~~pl~~aaa~a~L~~i~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrg~Gl~~~ 382 (445)
T PRK09221 316 AIEF---------FHGYTYS-AHPVACAAGLATLDIYREE---DLFERAAELAPYFEDAVHSLKGLPHVIDIRNIGLVAG 382 (445)
T ss_pred cccc---------ccccCCC-cCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEecCceEEE
Confidence 0000 0001111 2222222333455555333 35678888999999998876332222111 111233
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.+.+.... ......++.+.+.++| +++.. .+ ..+|++. ....|++||++++++|++++.++
T Consensus 383 v~~~~~~~~---~~~~~~~~~~~~~~~G-v~~~~---~~-~~lr~~P-pl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 383 IELAPRPGA---PGARGYEAFMKCFEKG-LLVRY---TG-DTIALSP-PLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred EEEeccccc---ccchHHHHHHHHHHCC-eEEee---cC-CEEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 343321100 1112346778888888 44432 12 4799998 77889999999999999988654
No 335
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.46 E-value=2.9e-10 Score=115.18 Aligned_cols=313 Identities=12% Similarity=0.086 Sum_probs=174.1
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHHHhC
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQIGG 196 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~~g 196 (486)
+.++.+.|++++..+.. ...+|+++||+|+..|+..||... ++..|+ .....|-...-+....|
T Consensus 85 ~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s~t~ 149 (421)
T PRK06777 85 YVTLAERINALAPIDGP------AKTAFFTTGAEAVENAVKIARAYT---------GRPGVIAFGGAFHGRTLLTMALTG 149 (421)
T ss_pred HHHHHHHHHHhCCCCCC------ceEEEeCCcHHHHHHHHHHHHHhh---------CCCeEEEEcCCcCCccHHHHhhcC
Confidence 34455557777643211 147899999999999999998752 233343 34445655444443323
Q ss_pred C--------C--CCCeEEEeCCCCCC---CccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-CC---hHHHHHHH
Q 041829 197 I--------H--PQNFRVLKTDSSTN---YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV-DP---LLALGNIA 259 (486)
Q Consensus 197 ~--------g--~~~v~~v~~~~~~~---~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i-d~---l~~I~~ia 259 (486)
. + ...+..+|...... ..-+++.+++.+++.. .+..+.+|++.......|.. -| +++|.++|
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~-~~~~iaavi~Epv~~~~G~~~~~~~~l~~l~~lc 228 (421)
T PRK06777 150 KVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADI-APDQVAAILLEPIQGEGGFNVAPPEFMSALRTLC 228 (421)
T ss_pred CCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhcc-CCCceEEEEECCccCCCCCccCCHHHHHHHHHHH
Confidence 1 0 01233333321100 0123666777775321 12335667777666666753 33 89999999
Q ss_pred HHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccC
Q 041829 260 KSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN 339 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~ 339 (486)
++||+++++|++|.|+.....-+.....++ ..|.++ .-|.++..+..|+++.++ + +.+.+.... .
T Consensus 229 ~~~g~llI~DEv~tg~gr~g~~~~~~~~~~-~pDiv~--~sK~l~~G~pigav~~~~-~-i~~~~~~~~--~-------- 293 (421)
T PRK06777 229 DEHGILLIADEVQTGFARTGKLFAMEYYDV-KPDLIT--MAKSLGGGMPISAVVGRA-E-VMDAPAPGG--L-------- 293 (421)
T ss_pred HHcCCEEEEechhhCCccCCchhhhhhcCC-CCCEEe--eehhhcCCCceEEEEEcH-H-HHhccCCCC--C--------
Confidence 999999999999987532211111000122 367665 468887556788888764 2 322222110 0
Q ss_pred CccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCceEEEEEecCCC
Q 041829 340 MVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD----LRFEVVTPRIFSLVCFRLLPPH 415 (486)
Q Consensus 340 ~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~v~f~~~~~~ 415 (486)
.+..++.+....++.++|+.+.. +++.++..++.++|++.|+++ |.+.-+ .+...++.+.+....
T Consensus 294 -------~~T~~~~p~~~aaa~a~L~~~~~---~~l~~~~~~~g~~l~~~L~~l~~~~~~i~~v-rg~G~~~~i~~~~~~ 362 (421)
T PRK06777 294 -------GGTYAGNPLAVAAALAVLDVIAE---EKLCQRALILGAHLVEVLEKAKASCPAIVDI-RARGSMVAVEFNDPQ 362 (421)
T ss_pred -------CCCCCcCHHHHHHHHHHHHHHHh---ccHHHHHHHHHHHHHHHHHHHHHhCCCeEEe-cCceEEEEEEEecCc
Confidence 00111222222334444444422 356677778888888888763 433323 344445555453211
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.. ....+....+...+.++| +.+.+....+ .++|++. ....+++++++++++|.+++
T Consensus 363 ~~-~~~~~~~~~l~~~~~~~G-v~i~~~~~~g-~~lr~~p-pl~i~~~~i~~~~~~l~~~l 419 (421)
T PRK06777 363 TG-KPSPEFTRQYQRQALEEG-LLLLSCGVHG-NVIRFLY-PLTIPDAQFSKALNILTRLL 419 (421)
T ss_pred cC-CccHHHHHHHHHHHHhCC-eEEeecCCCC-CEEEEeC-CCCCCHHHHHHHHHHHHHHH
Confidence 00 012345566777778888 4444432222 4899988 55789999999999998775
No 336
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.46 E-value=1.7e-11 Score=119.96 Aligned_cols=324 Identities=15% Similarity=0.072 Sum_probs=182.7
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEE------
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVV------ 178 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v------ 178 (486)
-..|..+|....||+. ++++||.+. +++|.+|+.++..+....... ++..+
T Consensus 67 DD~Y~gdpSv~~Lee~----vael~G~E~---------alpthqGRgaE~Il~~~~~~~----------~g~e~g~~~~~ 123 (467)
T TIGR02617 67 DEAYSGSRSYYALAES----VKNIFGYQY---------TIPTHQGRGAEQIYIPVLIKK----------REQEKGLDRSK 123 (467)
T ss_pred CcccccCchHHHHHHH----HHHHhCCce---------EEECCCCchHHHHHHHhhccc----------ccccccccccc
Confidence 3568899999999999 889999876 688988899988776554331 12222
Q ss_pred -EecCCCchhH-HHHHHHhCCCCCCeEEEeCC--------CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc-ccc
Q 041829 179 -YASDQTHSAL-QKACQIGGIHPQNFRVLKTD--------SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT-SST 247 (486)
Q Consensus 179 -~~s~~~H~s~-~~a~~~~g~g~~~v~~v~~~--------~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t-~tG 247 (486)
+++...|+-. .-.+.+.|+ .++.++.+ ...++.+|+++|+++|++.-. ...+ ++..+..+| .-|
T Consensus 124 ~~v~hn~~fett~g~a~l~G~---~~~~l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~-~~i~-~v~~tlt~N~~GG 198 (467)
T TIGR02617 124 MVAFSNYFFDTTQGHSQINGC---TARNVYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGP-NNVP-YIVATITCNSAGG 198 (467)
T ss_pred cccceEEEEecchHHHHHcCc---eeecccchhhcccccCCCCCCCcCHHHHHHHHhhcCC-CCce-eeeeeEEEecCCC
Confidence 2233344443 345667777 66655332 111369999999999986421 1122 233333223 335
Q ss_pred cc---CChHHHHHHHHHhCCEEEeeccccch-hccCc---------cchhcccC-CcCCCceeeecccccCCCCcceEEE
Q 041829 248 AV---DPLLALGNIAKSNGMWFHVDAAYAGS-ACICP---------EYRQYIDG-VEEADSFNMNAHKWFLTNFDCSALW 313 (486)
Q Consensus 248 ~i---d~l~~I~~ia~~~g~~lhvD~A~g~~-~~~~~---------~~~~~~~~-~~~aDs~~~~~hK~l~~p~~~g~l~ 313 (486)
.. +.+.++.++|++||+.+|+|||--.- +.+.. ..+...+. .+.+|+++++.-|.+++|.| |++.
T Consensus 199 qpvslenlr~V~~la~~~GIplhLDgARl~nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApvG-g~La 277 (467)
T TIGR02617 199 QPVSLANLKAVYEIAKKYDIPVVMDSARFAENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPMG-GLLC 277 (467)
T ss_pred EEeCHHHHHHHHHHHHHcCCcEEEEhHHHHHHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCccc-ceEE
Confidence 44 66789999999999999999975331 11110 11111111 25899999999999999964 5666
Q ss_pred EeCc---hHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHH
Q 041829 314 VKDR---NTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLV 390 (486)
Q Consensus 314 ~r~~---~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l 390 (486)
.+++ +.+.+.-.....|= .+..|+=-.+|-..+++ ..|... .-...+++.....+||.+.|
T Consensus 278 g~d~~~~~l~~~~~~~~i~~E-----------Gf~tYGGlagrd~ea~a--~Gl~e~---~~~~yl~~ri~qv~yl~~~L 341 (467)
T TIGR02617 278 FKDDSFFDVYTECRTLCVVQE-----------GFPTYGGLEGGAMERLA--VGLYDG---MNLDWLAYRINQVQYLVNGL 341 (467)
T ss_pred ecchhHHHHHHHHHhhccccc-----------CCcCcCchhHHHHHHHH--hhhhhc---ccHHHHHHHHHHHHHHHHHH
Confidence 7776 43333222222211 01111100111111111 123221 12345566677788999999
Q ss_pred hcCCCeEEecCCCceEEEEE---ecCCCCCcccchHHHHHHHHHHHcc-CcEEEEeeeE------------C-CEeEEEE
Q 041829 391 AQDLRFEVVTPRIFSLVCFR---LLPPHNDEDHGNKLNHKLLDDINST-GKIFISHTVL------------S-GKYILRF 453 (486)
Q Consensus 391 ~~~~~~~~~~~~~~~~v~f~---~~~~~~~~~~~~~~~~~l~~~l~~~-g~~~~~~~~~------------~-~~~~lRi 453 (486)
.+. |+-++. +...-|-+. +.|-- .. ...-.+.|...|... |+-.+.-+.+ . .-..+|+
T Consensus 342 ~~~-Gvpi~~-~Gghav~iDa~~~lphi-p~--~~fpa~al~~~ly~~~GiR~~e~G~~~~~rd~~~~~~~~~~~el~Rl 416 (467)
T TIGR02617 342 EEI-GVVCQQ-AGGHAAFVDAGKLLPHI-PA--DQFPAHALACELYKVAGIRAVEIGSLLLGRDPKTGKQLPCPAELLRL 416 (467)
T ss_pred HhC-CCcEEe-cCccEEEEehhhhCCCC-Ch--hhCcHHHHHHHHHHHcCcceEeecceecccCCCCCccCCCccceeee
Confidence 887 887765 433333222 11100 00 011124455555443 3212211111 0 1258999
Q ss_pred EecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 454 AVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 454 ~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
++.-..-|.+++|.+.++|..+.++
T Consensus 417 aipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 417 TIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred ccccccccHhHHHHHHHHHHHHHhh
Confidence 9855566899999999999988764
No 337
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.46 E-value=2.2e-10 Score=116.28 Aligned_cols=303 Identities=14% Similarity=0.100 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.|++++.. .+ ..+|+++||||+..|+..||... ++. +|......|-...-+...
T Consensus 93 ~~~~~la~~l~~~~p~-~~-------~v~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~~~ 155 (428)
T PRK12389 93 ELEIEFAKMLKEAIPS-LE-------KVRFVNSGTEAVMTTIRVARAYT---------GRTKIIKFAGCYHGHSDLVLVA 155 (428)
T ss_pred HHHHHHHHHHHHhCCC-Cc-------EEEEeCCHHHHHHHHHHHHHHhh---------CCCEEEEECCCcCCChHHHHHh
Confidence 4455566667777642 11 48999999999999999999752 233 344444456544444433
Q ss_pred hCCCC----------------CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHH
Q 041829 195 GGIHP----------------QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLA 254 (486)
Q Consensus 195 ~g~g~----------------~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~ 254 (486)
.|-+. .++..+|. -|++.|++.+++. +..+.+|++.......|.+.| +++
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~d~~~l~~~l~~~---~~~vaavi~EPv~g~~G~~~p~~~yl~~ 225 (428)
T PRK12389 156 AGSGPSTLGTPDSAGVPKSIAQEVITVPF-------NDIEALKEALDKW---GDEVAAVLVEPIVGNFGIVEPKPGFLEA 225 (428)
T ss_pred cCCcccccCCCCCCCCCCcccCceEEcCC-------CCHHHHHHHHHhc---CCcEEEEEEeCCCCCCCCcCCCHHHHHH
Confidence 32100 01122221 1789999888643 234667777777777898888 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCC-cccccc
Q 041829 255 LGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTN-PEFLKN 333 (486)
Q Consensus 255 I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~-~~yl~~ 333 (486)
|.++|++||+.+++|+.+.|+ -....+.....++ ..|.+++ -|.++..++.|.++.++ + +.+.+... ..+...
T Consensus 226 l~~lc~~~g~llI~DEV~tG~-Rt~~~~a~~~~gv-~PDivt~--gK~lggG~Pi~av~~~~-~-i~~~~~~~~~~~~~~ 299 (428)
T PRK12389 226 VNELAHEAGALVIYDEVITAF-RFMYGGAQDLLGV-EPDLTAL--GKIIGGGLPIGAYGGRK-D-IMEQVAPLGPAYQAG 299 (428)
T ss_pred HHHHHHHcCCEEEEEcccccc-ccCcchhhHHhCC-CCCeeee--chhhcCCCceeEEeEHH-H-HHhhhccCCCccccc
Confidence 999999999999999999876 2211111111233 4787766 48887667788887654 2 33333211 111100
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCCCceEEE
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLR-FEVVTPRIFSLVC 408 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~-~~~~~~~~~~~v~ 408 (486)
| -.+.+....++.++++.+..+ ++.++..++.++|++.|++ +|- .++.... .++.
T Consensus 300 --------------T-~~gnpl~~Aaala~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~v~r~~--g~~g 359 (428)
T PRK12389 300 --------------T-MAGNPASMAAGIACLEVLQQE---GVYEKLDRLGAMLEEGILEAAEKHGITITINRLK--GALT 359 (428)
T ss_pred --------------C-CccCHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCEEEEecC--cEEE
Confidence 0 012222233444556555433 3566777788888888765 332 1222111 2333
Q ss_pred EEecCCCCCc----cc-chHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDE----DH-GNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 409 f~~~~~~~~~----~~-~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
+.+....... .. .......+...+.++| +++.+.. ...+.+ ....|++||++++++++++.++
T Consensus 360 i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-v~~~~~~---~~~~~~---~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 360 VYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQG-INLAPSK---YEAWFL---TTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EEEeCCCCCChhhhcccCHHHHHHHHHHHHHCC-cEeecCC---CCCeee---cCCCCHHHHHHHHHHHHHHHHh
Confidence 3332111000 00 1233467788888888 4444431 112333 4567999999999999988754
No 338
>PRK05965 hypothetical protein; Provisional
Probab=99.45 E-value=8e-10 Score=112.90 Aligned_cols=333 Identities=15% Similarity=0.085 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.|++++.-+.+ ..+|+++||||+..|+..||...... +.. ++. +|......|-...-+...
T Consensus 90 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~-g~~--~r~kii~~~~~YHG~t~~a~s~ 159 (459)
T PRK05965 90 EPAIRLAAKLAERAPGSLN-------HVYFTLGGSDAVDSAVRFIRHYWNAT-GRP--SKKQFISLERGYHGSSSVGAGL 159 (459)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCChhHHHHHHHHHHHHHHHhc-CCC--CccEEEEecCCcCcccHHHHHh
Confidence 3444555667887632211 47999999999999999998753211 111 233 343444456543333332
Q ss_pred hCC-------C--CCCeEEEeCCCC--CCCccC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 195 GGI-------H--PQNFRVLKTDSS--TNYSLS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 195 ~g~-------g--~~~v~~v~~~~~--~~~~id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
.|. + ...+..+|.... ..+.-| +++|++.++.. ....+.+|++.-.....|.+-|
T Consensus 160 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~--~~~~iAAvIvEPiqg~gG~~~p~~~y 237 (459)
T PRK05965 160 TALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAEL--GADNVAAFFCEPIQGSGGVIVPPKGW 237 (459)
T ss_pred cCCchhhcccCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCceEEEEEeccccCCCCccCCHHH
Confidence 221 1 122344443210 001123 25666666532 1134567777766666676643
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..+ +.|.++.+++ +.+.+......
T Consensus 238 l~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~--i~~~~~~~~~~ 312 (459)
T PRK05965 238 LKAMREACRELGILFVADEVITGFGRTGPLFACEAEGV-VPDLMTVA--KGLTSGYVPMGAVLMSDH--VYQGIADGAGA 312 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhccCccCchhhhHhhcCC-CCCeEEec--hhhccCCcceeEEEEcHH--HHHHHhccccc
Confidence 89999999999999999999877643221111111233 47998875 8887664 6888888764 22233211000
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVC 408 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~ 408 (486)
.. .+...+.-.+.+.......++++.+-.+ +++++..++.++|.+.|+++....++.+ ....++.
T Consensus 313 ~~----------~~~h~~T~~gnpl~~Aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Gl~~g 379 (459)
T PRK05965 313 AA----------PVGHGYTYSAHPVSAAVGLEVLRLYHEG---GLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGA 379 (459)
T ss_pred cc----------cccccCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHhhccCCCEEEEeecceEEE
Confidence 00 0000000112222223444455555333 3556777888888888876532211211 1222344
Q ss_pred EEecCCC--CCc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 409 FRLLPPH--NDE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 409 f~~~~~~--~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
+.+.... .+. ........++...+.++|. ++.+ .+..++|++. ....|++||+++++.|.++++++.++.
T Consensus 380 ie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gl-l~~~---~g~~~i~~~P-pL~it~~ei~~~~~~l~~~l~~~~~~~ 452 (459)
T PRK05965 380 LELVADKATKTPFDAALDPADRIFDRAYANGL-VFRA---FGDGVLGFAP-ALCCTEGEFDLIFERTRKTLDDVLADP 452 (459)
T ss_pred EEEeccccccCCCCchhHHHHHHHHHHHhCCe-EEEe---cCCcEEEEEC-CCcCCHHHHHHHHHHHHHHHHHHhcCc
Confidence 4443211 000 0012345677888888884 4433 2345799987 667899999999999999998876543
No 339
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.45 E-value=8.6e-10 Score=112.38 Aligned_cols=324 Identities=11% Similarity=0.088 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHcCCCC-CCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPE-DFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~-~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~ 193 (486)
++...++.+.|++++.... .. ...++++|||||+..|+..||... | +..+|......|-...-+..
T Consensus 81 ~~~~~~lae~L~~~~p~~~~~~-----~~~f~~~sGsEA~e~AlklAr~~t-------g-r~~Ii~~~~~yHG~t~~~~s 147 (442)
T TIGR00709 81 TPLKDAFIEALLNIIPKRKMDY-----KLQFPGPSGADAVEAAIKLAKTYT-------G-RTNVISFSGGFHGMTIGALA 147 (442)
T ss_pred cHHHHHHHHHHHHhCCCcCCCc-----cEEEeCCCHHHHHHHHHHHHHHhc-------C-CCeEEEEcCCcCCchHHHHh
Confidence 3455556666888875321 00 013556899999999999999752 1 22344445555655544444
Q ss_pred HhCC---------CCCCeEEEeCCCCCCCcc--------CHHHHHHHHHHHH----hCCCccEEEEEecCCccccccCC-
Q 041829 194 IGGI---------HPQNFRVLKTDSSTNYSL--------SPDSLAEAISRDL----TIGLIPFFLCATVGTTSSTAVDP- 251 (486)
Q Consensus 194 ~~g~---------g~~~v~~v~~~~~~~~~i--------d~~~L~~~i~~~~----~~g~~p~~vv~~~~~t~tG~id~- 251 (486)
..|. ....+..+|... .++. +.+.+.+.+++.. .....+.+|++.....+.|.+-|
T Consensus 148 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi~Epi~g~~G~~~~~ 225 (442)
T TIGR00709 148 VTGNLFAKNAVGMLMPGVQFMPYPH--EYRCPFGIGGEAGSNASIEYFENFIEDVESGVDKPAAVILEAIQGEGGVVAAP 225 (442)
T ss_pred hcCChhhhccCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCccCC
Confidence 4331 011244444321 1222 2233333222221 11233566666666666676632
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCc
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNP 328 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~ 328 (486)
+++|.++|++||+++++|+.+.|+.....-+.....++ ..|.+++ -|.++..++.|+++.+++ + ..+. .
T Consensus 226 ~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~~G~Pigav~~~~~--~-~~~~--~ 297 (442)
T TIGR00709 226 SEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGI-EPDFVVM--SKAVGGGLPLAVLLIAPE--F-DAWQ--P 297 (442)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCC-CCcEEEE--cccccCCcccEEEEEchH--H-hccC--C
Confidence 89999999999999999999887643221111111233 4688885 588876677899888764 2 2221 0
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCce
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTP--RIFS 405 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~--~~~~ 405 (486)
.... +.-.+.+....++.++++.+..+. +.++..++.++|.+.|+++. ...++.+ -...
T Consensus 298 ~~~~---------------~T~~gnpla~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~vrG~Gl 359 (442)
T TIGR00709 298 AGHT---------------GTFRGNQLAMVTGTEALNYWKDDN---LAQNAQERGERITSFLDDMIKEHPCIGNVRGRGL 359 (442)
T ss_pred CcCC---------------CCCCcCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccce
Confidence 0000 011122223334445555544433 45566777777777776531 1212211 2233
Q ss_pred EEEEEecCCCC--C----cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 406 LVCFRLLPPHN--D----EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 406 ~v~f~~~~~~~--~----~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
++.+.+..... + ..........+...+.++| +++.+.... ..++|+.. ....|++||+++++++.+++.++
T Consensus 360 ~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G-vl~~~~~~~-~~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~ 436 (442)
T TIGR00709 360 MQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENG-LLLETGGRE-GEVFRLLC-PITIDQEECEEGISRFKQAVEEA 436 (442)
T ss_pred EEEEEEccCcccccccccCCcchHHHHHHHHHHHHCC-eEEeecCCC-CCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHH
Confidence 45555532110 0 0001134566777788888 444433222 35899988 78899999999999999999887
Q ss_pred HHh
Q 041829 480 LAR 482 (486)
Q Consensus 480 ~~~ 482 (486)
.++
T Consensus 437 ~~~ 439 (442)
T TIGR00709 437 LAE 439 (442)
T ss_pred HHH
Confidence 653
No 340
>PRK06149 hypothetical protein; Provisional
Probab=99.44 E-value=2.5e-10 Score=126.70 Aligned_cols=319 Identities=12% Similarity=0.051 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhC
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGG 196 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g 196 (486)
...+..+.|++++.-+.+ ..+|++|||+||..|+..||... | ++.+|......|-...-+..+.+
T Consensus 625 ~~~elae~L~~~~p~~~~-------~v~f~~SGsEA~e~AlklAr~~t-------g-r~~ii~~~~~yHG~t~ga~~~s~ 689 (972)
T PRK06149 625 AVAEFSERLAALAPDGLD-------TVFLVNSGSEANDLAIRLAWAAS-------G-RRDVVSVLEAYHGWTVATDAVST 689 (972)
T ss_pred HHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHhc-------C-CCeEEEEeCCCCCcChhHhhhcC
Confidence 334444558888732111 38999999999999999998752 1 23345555556643322221111
Q ss_pred ----------CCCCCeEEEeCCCC--CCCc-cC-----HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHH
Q 041829 197 ----------IHPQNFRVLKTDSS--TNYS-LS-----PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLA 254 (486)
Q Consensus 197 ----------~g~~~v~~v~~~~~--~~~~-id-----~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~ 254 (486)
...+.+..++.... ..|. .+ .+++++.++.....+..+.+|++.......|.+-| +++
T Consensus 690 ~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~iAavI~Epv~g~gG~i~~p~~yL~~ 769 (972)
T PRK06149 690 SIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDASGRGLAGFICEPVYGNAGGIALPPGYLQQ 769 (972)
T ss_pred CccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhhcCCceEEEEEcccccCCCcccCCHHHHHH
Confidence 00112334433210 0011 12 35666666654444556777888777777788888 999
Q ss_pred HHHHHHHhCCEEEeeccccchhccCccc-hhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccc
Q 041829 255 LGNIAKSNGMWFHVDAAYAGSACICPEY-RQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKN 333 (486)
Q Consensus 255 I~~ia~~~g~~lhvD~A~g~~~~~~~~~-~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~ 333 (486)
|.++|++||+.+++|+++.|+......+ .....|+ ..|.+++ -|.++..++.|+++++++ +.+.+... .++..
T Consensus 770 l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv-~PDivt~--gK~lg~G~Pl~av~~~~~--i~~~~~~~-~~~~s 843 (972)
T PRK06149 770 VYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGV-VPDIITM--AKGMGNGHPLGAVITRRE--IAEALEAE-GYFFS 843 (972)
T ss_pred HHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCC-CCCEEEe--cccccCCeeeEEEEEcHH--HHhhhccC-CcccC
Confidence 9999999999999999986553322111 1111234 5788876 488876677899888763 33333221 11111
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC----CCeEEecCCCceEEEE
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD----LRFEVVTPRIFSLVCF 409 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~----~~~~~~~~~~~~~v~f 409 (486)
+. .+.+.......++|+.+-.+ ++.++..++.++|++.|+++ |-+..+ .-...++.+
T Consensus 844 --------------T~-~gnP~~~aaala~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~Gl~~gv 904 (972)
T PRK06149 844 --------------ST-GGSPVSCRIGMAVLDVLREE---KLQENARRVGDHLKARLEALADRHPLIGAV-HGMGLYLGV 904 (972)
T ss_pred --------------CC-CCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHhCCCeEEE-eecceEEEE
Confidence 11 22222333444555555443 35566667777787777653 322111 112224444
Q ss_pred EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.+.....+..........+.+.+.++| +++.+.... .+++|+.. ....|++|||.++++|.+++.+
T Consensus 905 el~~~~~~~~~~~~~~~~i~~~l~~~G-vl~~~~g~~-~~vl~~~P-pl~it~~~id~~~~~l~~~l~~ 970 (972)
T PRK06149 905 ELVRDRQTLEPATEETAAICDRLLELG-VIMQPTGDH-LNILKIKP-PLCLDRESADFFVDMLDRVLTE 970 (972)
T ss_pred EEecCcccCCCChHHHHHHHHHHHhCC-eEEeecCCC-CCEEEEEC-CCcCCHHHHHHHHHHHHHHHHh
Confidence 443211000012234567888888888 455543221 25799877 5678999999999999988754
No 341
>PRK07036 hypothetical protein; Provisional
Probab=99.44 E-value=7.7e-10 Score=113.15 Aligned_cols=327 Identities=12% Similarity=0.108 Sum_probs=178.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEE-EecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVV-YASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v-~~s~~~H~s~~~a~~ 193 (486)
++.+.++.+.|++++.-+.+ ..+|++|||+|+..|+..||.....+ +.. ++..| .....-|-...-+..
T Consensus 94 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~t--~r~~Ii~~~~~YHG~t~~a~s 163 (466)
T PRK07036 94 NAPAAELAAKLAELAPGDLN-------HVFLTTGGSTAVDSALRFVHYYFNVR-GRP--AKKHIITRGDAYHGSTYLTAS 163 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHhc-CCC--CccEEEEEcCccCCccHhhhc
Confidence 44556666668887642222 48999999999999999998643111 111 12334 334445654433333
Q ss_pred HhCCCC---------CCeEEEeCCCC--CCCccC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---
Q 041829 194 IGGIHP---------QNFRVLKTDSS--TNYSLS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP--- 251 (486)
Q Consensus 194 ~~g~g~---------~~v~~v~~~~~--~~~~id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~--- 251 (486)
..|... ..+..+|.... ....+. .+.+++.+.. ..+..+.+|++.......|.+-|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~iAavi~EPv~g~gG~~~p~~~ 241 (466)
T PRK07036 164 LTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILS--LGADNIAAFIAEPILGSGGVIVPPPG 241 (466)
T ss_pred ccCCCcccccccCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHH--cCCCceEEEEEeCCcCCCCCccCCHH
Confidence 322210 12344443210 001111 2344554432 12345677888877777788877
Q ss_pred -hHHHHHHHHHhCCEEEeeccccchhccCccchhc-ccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCC-
Q 041829 252 -LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQY-IDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTN- 327 (486)
Q Consensus 252 -l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~-~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~- 327 (486)
+++|.++|++||+.+++|+.+.|+.-...-+... .-++ ..|.+++ -|.++..+ ++|+++.+++ +.+.+...
T Consensus 242 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~~~~~~~gv-~PDivt~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~ 316 (466)
T PRK07036 242 YHARMREICRRYDILYISDEVVTGFGRLGHFFASEAVFGI-QPDIITF--AKGLTSGYQPLGAVIISER--LLDVISGPN 316 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeechhCCCcCchhhhhhhhcCC-CCCEEEE--ccccccCccccEEEEEcHH--HHHHHhccc
Confidence 9999999999999999999987653221111100 1133 4688877 48887653 5788887653 22333211
Q ss_pred -cc--cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CC
Q 041829 328 -PE--FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PR 402 (486)
Q Consensus 328 -~~--yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~ 402 (486)
+. |... .| -.+.+.....+.++++.+..+ ++.++..++.++|++.|+++....++. ..
T Consensus 317 ~~~~~~~~~-------------~T-~~gnpl~~aaa~a~Le~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~v~~vrG 379 (466)
T PRK07036 317 AKGNVFTHG-------------FT-YSGHPVACAAALKNIEIMERE---GLCEHVREVGPYFEERLASLRELPLVGDVRG 379 (466)
T ss_pred CcCcccccC-------------CC-CCCCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhccCCCEEEEEe
Confidence 01 1100 01 112222223334445444332 456677778888888886643222111 11
Q ss_pred CceEEEEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 403 ~~~~v~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
...++.+.+..... +. .........+...+.++|. ++.+. + ..+|++. ....|++|||++++++.++++++
T Consensus 380 ~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv-l~~~~---~-~~~~l~P-pl~it~~~id~~~~~l~~al~~~ 453 (466)
T PRK07036 380 DHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGL-LVRPL---E-HLCVLSP-PLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred eceEEEEEEccCccccCCCCchhHHHHHHHHHHHHCCc-EEeec---C-CEEEEeC-CCcCCHHHHHHHHHHHHHHHHHH
Confidence 22344555532110 00 0012345677788888884 44332 2 3678876 55679999999999998888776
Q ss_pred HH
Q 041829 480 LA 481 (486)
Q Consensus 480 ~~ 481 (486)
.+
T Consensus 454 ~~ 455 (466)
T PRK07036 454 AD 455 (466)
T ss_pred HH
Confidence 43
No 342
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.44 E-value=1.6e-10 Score=114.19 Aligned_cols=283 Identities=15% Similarity=0.096 Sum_probs=162.4
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHH
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQK 190 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~ 190 (486)
+...+++++ ++++++.+. .+++++||+|+..|+..+|... ++..|++ +...|-+..-
T Consensus 66 ~~~~~la~~----l~~~~~~~~---------v~~~~SGseA~e~Alklar~~~---------gr~~Ii~~~~syHG~t~~ 123 (364)
T PRK04013 66 EEKEEMLEE----LSKWVNYEY---------VYMGNSGTEAVEAALKFARLYT---------GRKEIIAMTNAFHGRTMG 123 (364)
T ss_pred HHHHHHHHH----HHhhcCCCE---------EEEeCchHHHHHHHHHHHHHHh---------CCCEEEEECCccccCchh
Confidence 334455555 777776543 7999999999999999998752 3334444 4444654433
Q ss_pred HHHHhC-------CCC--CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC-C---hHHHHH
Q 041829 191 ACQIGG-------IHP--QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD-P---LLALGN 257 (486)
Q Consensus 191 a~~~~g-------~g~--~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id-~---l~~I~~ 257 (486)
+....+ .+. ..+..+|. -|++++++.+.+. +.+|++.......|.+- | +++|.+
T Consensus 124 ~ls~~~~~~~~~~~~p~~~~~~~~~~-------~d~~~l~~~i~~~------~aAvivEpi~g~gG~~~~~~~yl~~lr~ 190 (364)
T PRK04013 124 ALSATWKPKYREDFEPLVPGFKHIPF-------NDVEAAKEAITKE------TAAVIFEPIQGEGGIVPAKEEFVKTLRD 190 (364)
T ss_pred hccCCCCcccccCCCCCCCCcEEecC-------CCHHHHHHHhcCC------cEEEEEcCCcCCCCCcCCCHHHHHHHHH
Confidence 333211 110 11222222 2678888887532 45677766555556553 4 999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQ 337 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~ 337 (486)
+|++||+.++.|+++.|+ -...-+.....++ ..|.+++ -|.++..++.|.++.+..- . ....
T Consensus 191 lc~~~gillI~DEv~tG~-RtG~~~a~~~~gv-~PDiv~~--gK~lggG~P~~a~~~~~~~--~------~~~~------ 252 (364)
T PRK04013 191 LTEDVGALLIADEVQSGL-RTGKFLAIEHYKV-EPDIVTM--GKGIGNGVPVSLTLTNFDV--E------RGKH------ 252 (364)
T ss_pred HHHHcCCEEEEechhhcC-CCCchhHHHhcCC-CCCEEEe--cccccCCceeEEEEecccc--c------CCCc------
Confidence 999999999999998765 3221111111223 4788777 4888666778888776431 0 0000
Q ss_pred cCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCC
Q 041829 338 ANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHND 417 (486)
Q Consensus 338 ~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~ 417 (486)
.+.-.+.+....+..++++.+-.+++.+..++. +. .+.. |.+.-+ .-..-++.+.+...
T Consensus 253 ---------~~T~~gnp~~~aaa~a~l~~i~~~~l~~~~~~~------l~-~l~~-~~v~~v-RG~Gl~~gve~~~~--- 311 (364)
T PRK04013 253 ---------GSTFGGNPLACKAVAVTLRILRRERLVEKAGEK------FI-EIKG-ERVVTT-RGRGLMIGIVLKKP--- 311 (364)
T ss_pred ---------CCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHH------HH-Hhcc-Ccceee-eeCcEEEEEEeCCc---
Confidence 001122223334445556666555554443332 22 2222 221111 11223444554321
Q ss_pred cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 418 EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 418 ~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
...+.+.+.++|. ++.+. +..++|+.. ....|++|+++++++|+++.++++
T Consensus 312 -------~~~i~~~~~~~Gl-l~~~~---g~~vlr~~P-pl~it~~~i~~~~~~l~~~l~~~~ 362 (364)
T PRK04013 312 -------VGKYVEELQNRGY-LVHTA---GQRVIRLLP-PLIISKDTMEEAKSAIEGVINDIL 362 (364)
T ss_pred -------HHHHHHHHHhCCc-EEeeC---CCCEEEEeC-CcccCHHHHHHHHHHHHHHHHHHh
Confidence 2457777888884 44332 336899988 778899999999999999987654
No 343
>PRK07482 hypothetical protein; Provisional
Probab=99.43 E-value=1.2e-09 Score=111.75 Aligned_cols=333 Identities=14% Similarity=0.069 Sum_probs=179.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
++.+.++.+.|++++.-+.+ ..+|++|||||+..|+..||.....+ +.. .+..|+. ....|-...-+..
T Consensus 93 ~~~~~~lAe~L~~~~p~~~~-------~v~f~~sGSEAve~AlKlAr~~~~~~-g~~--~r~~Ii~~~~~YHG~t~ga~s 162 (461)
T PRK07482 93 TEASITLSKRIIDRAPAGMS-------KVYYGLSGSDANETQIKLVWYYNNVL-GRP--EKKKIISRWRGYHGSGVVTGS 162 (461)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHHHHhc-CCC--CCceEEEecCccCCccHhhhh
Confidence 45556666668887742222 47899999999999999998643111 111 2333443 4444543322222
Q ss_pred HhC---------CCCCCeEEEeCCCCCCC-----------ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC--
Q 041829 194 IGG---------IHPQNFRVLKTDSSTNY-----------SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-- 251 (486)
Q Consensus 194 ~~g---------~g~~~v~~v~~~~~~~~-----------~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-- 251 (486)
..| .....+..+|.....+. .-++++|++.+... ....+.+|++.-.....|.+-|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvi~EPvqg~gG~~~~~~ 240 (461)
T PRK07482 163 LTGLSLFHQHFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAE--GPDTIAAFIAEPVLGTGGIVPPPA 240 (461)
T ss_pred ccCCchhhhccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhc--CCCcEEEEEECCccCCCCCcCCCH
Confidence 211 11113333433210000 01456777777432 1234567777765555676633
Q ss_pred --hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc
Q 041829 252 --LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP 328 (486)
Q Consensus 252 --l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~ 328 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..+ +.|.++.+++ +.+.+....
T Consensus 241 ~yl~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~--i~~~~~~~~ 315 (461)
T PRK07482 241 GYWPAIQAVLKKYDILLIADEVVTGFGRLGSMFGSDHYGI-EPDLITVA--KGLTSAYAPLSGSIVGEK--VWDVLEQGS 315 (461)
T ss_pred HHHHHHHHHHHHhCCEEEEeccccCCCcCcchhhHHhcCC-CCCEEEEc--cccccCccccceeeecHH--HHHHHhccc
Confidence 79999999999999999999877643222221111234 57998874 8887654 6777777653 222232111
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCc
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIF 404 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~ 404 (486)
+.. +. +...+.-.+.+....++.++++.+-.++ +.++..++.++|.+.|++ +|-+.-+ ....
T Consensus 316 ~~~--------~~--~~h~~T~~gnpl~~Aaa~a~L~~~~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~v~~v-rG~G 381 (461)
T PRK07482 316 DEH--------GA--IGHGWTYSGHPICAAAALANLDILEREN---LVGNAAEVGAYFRARLRAAFGDHPLVGEV-RGVG 381 (461)
T ss_pred ccC--------Cc--cccCCCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHhcCCCEEEE-eece
Confidence 000 00 0000001122222334445555554443 445566677777777753 4322111 1122
Q ss_pred eEEEEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 405 SLVCFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 405 ~~v~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.++.+.+..... .. ........++...+.++|.+ +.+.. +..++|+.. ...+|++||++++++|.++++++.+
T Consensus 382 lm~giel~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl-~~~~~--~~~~i~~~P-pl~it~~ei~~~~~~l~~~l~~~~~ 457 (461)
T PRK07482 382 MLAAVEFVADRDDRTPFDPALKIGPQVSAAALERGVI-ARAMP--HGDILGFAP-PLVLTRAEADEIVAIAKDAVDEVLG 457 (461)
T ss_pred eEEEEEeccCCCcCCCCChhhHHHHHHHHHHHHCCcE-EecCC--CCCEEEEeC-CCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 344444432110 00 00112456788888888844 33211 125799987 6788999999999999999887754
Q ss_pred h
Q 041829 482 R 482 (486)
Q Consensus 482 ~ 482 (486)
+
T Consensus 458 ~ 458 (461)
T PRK07482 458 R 458 (461)
T ss_pred H
Confidence 3
No 344
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.43 E-value=2.9e-10 Score=114.94 Aligned_cols=314 Identities=12% Similarity=0.084 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhH---HH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSAL---QK 190 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~---~~ 190 (486)
++.+.++.+.|.++++...+ ...|+++||||+..|+..||... ++..|+ .....|-.. ..
T Consensus 92 ~~~~~~la~~L~~~~~~~~~-------~v~f~~SGsEA~e~AiklAr~~t---------gr~~ii~~~~~yHG~td~~~~ 155 (433)
T PRK00615 92 SEQEILFAEELFSYLGLEDH-------KIRFVSSGTEATMTAVRLARGIT---------GRSIIIKFLGCYHGHADTLLQ 155 (433)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCchHHHHHHHHHHHHHhh---------CCCEEEEEcCccCCCCcccCc
Confidence 34555666778888754322 47999999999999999999752 333343 344445422 11
Q ss_pred HHHHhCCCCCCe-EEE---eCCCCC-C-CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHH
Q 041829 191 ACQIGGIHPQNF-RVL---KTDSST-N-YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAK 260 (486)
Q Consensus 191 a~~~~g~g~~~v-~~v---~~~~~~-~-~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~ 260 (486)
+....+-..... ... +..... . -.-|+++|++.+.+. +..+.+|++.......|.+-| +++|.++|+
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~---~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~ 232 (433)
T PRK00615 156 GISFSETSLDTLTHLVDTDLAHPLTLSLPYNDFQIFQTVMNSL---GHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCR 232 (433)
T ss_pred ccccCCCCcCcCCCCCCCCCCCCCeEeCCCCCHHHHHHHHHhc---CCceEEEEECCCCCCCCcccCCHHHHHHHHHHHH
Confidence 111111100000 000 000000 0 012789999988643 234567787777777888877 459999999
Q ss_pred HhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCC
Q 041829 261 SNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANM 340 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~ 340 (486)
+||+.+++|.++.|+ .....+.....++ ..|.+++ -|.++..+.+|+++.+++ +.+.+... .+....
T Consensus 233 ~~g~llI~DEv~tG~-R~G~~ga~~~~gv-~PDi~~~--gK~lggG~p~~av~~~~~--i~~~~~~~-~~~~~~------ 299 (433)
T PRK00615 233 RTGSLSIMDEVVTGF-RVAQGGAAAIYHV-KPDITVY--GKILGGGLPAAAVVAHKS--IMDHLAPE-GTIFQA------ 299 (433)
T ss_pred HcCCEEEEEcccccc-cccHhHHHHhcCC-CCCeEEE--cccccCCcceeeeeecHH--HHhhhcCC-CCcccC------
Confidence 999999999999654 2211111111123 4687765 688875566788877653 22233211 110000
Q ss_pred ccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC---CCe--EEecCCCceEEEEEecCCC
Q 041829 341 VVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD---LRF--EVVTPRIFSLVCFRLLPPH 415 (486)
Q Consensus 341 ~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~---~~~--~~~~~~~~~~v~f~~~~~~ 415 (486)
+.-.+.+....+..++++.+..+. .+++..++.++|.+.|++. .++ .... ...++.+.+....
T Consensus 300 -------~T~~g~p~~~aa~la~L~~i~~~~---~~~~~~~~g~~l~~~l~~~~~~~g~~v~~~r--~G~~~~i~~~~~~ 367 (433)
T PRK00615 300 -------GTLSGNPLAMAAGKASINLCREQG---FYTQLSTLEQNFLSPIEEMIRSQGFPVSLVR--YGSMFSFFFNENR 367 (433)
T ss_pred -------CCCcccHHHHHHHHHHHHHHhccc---HHHHHHHHHHHHHHHHHHHHHHcCCCeEEEe--eceEEEEEEeCCC
Confidence 000112222334445555554333 4556666677775555441 123 3332 2334455553211
Q ss_pred CC----c-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 416 ND----E-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 416 ~~----~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.. . ....+....+...|.++| +++.+..+.. . .+ +...|++|||+++++++++++++
T Consensus 368 ~~~~~~~~~~~~~~~~~~~~~l~~~G-v~~~~~~~~~-~----~l-s~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 368 PNNLAEAQLSDIEAFQTFYQSAFSKG-VYLSPSPFEA-S----FL-SSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred CCChHHHhhCCHHHHHHHHHHHHHCC-eeecCccccc-c----ce-ecCCCHHHHHHHHHHHHHHHHHH
Confidence 00 0 001334567888888888 5555432221 1 22 45669999999999999998765
No 345
>PRK07480 putative aminotransferase; Validated
Probab=99.43 E-value=1.2e-09 Score=111.38 Aligned_cols=330 Identities=13% Similarity=0.087 Sum_probs=175.2
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
...+.++.+.|+++++.+.+ ..+|++|||+|+..|+..||...... +.. .+..|+. ....|-...-+..
T Consensus 93 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~tl~a~s 162 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFN-------HVFFTNSGSEANDTVLRMVRHYWALK-GKP--QKKVIISRKNGYHGSTVAGAS 162 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCcchhhhh
Confidence 34455556668888743222 47999999999999999998753211 111 2333443 4444654433333
Q ss_pred HhCC-------C--CCCeEEEeCCCC--CCCccC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---
Q 041829 194 IGGI-------H--PQNFRVLKTDSS--TNYSLS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP--- 251 (486)
Q Consensus 194 ~~g~-------g--~~~v~~v~~~~~--~~~~id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~--- 251 (486)
..|. + ...+..+|.... ..+..+ .+.|++.+.+. .+..+.+|++.-.....|.+.|
T Consensus 163 ~~g~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~vAAvi~EPiqg~gG~~~~~~~ 240 (456)
T PRK07480 163 LGGMKYMHEQGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILEL--GADNVAAFIGEPIQGAGGVIIPPAT 240 (456)
T ss_pred ccCChhhhcccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhc--CCCcEEEEEEccccCCCCCccCCHH
Confidence 2221 0 112233332110 000011 25555554321 1234567777766666777766
Q ss_pred -hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcc
Q 041829 252 -LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 -l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++ -|.++..+ +.|.++.+++ +.+.+.....
T Consensus 241 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~~~~ 315 (456)
T PRK07480 241 YWPEIQRICRKYDILLVADEVICGFGRTGEWFGSQHFGI-KPDLMTI--AKGLTSGYIPMGAVGVGDR--VAEVLIEEGG 315 (456)
T ss_pred HHHHHHHHHHHcCCEEEEechhhCCCcCcchhhhhhcCC-CCCeeee--ehhhccCCccceEEEEcHH--HHHHHhcCCC
Confidence 99999999999999999999876532221111111233 4788776 48876543 5788877653 2333311111
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHH-HHHHHHHHHHHhcCCCeEEecC--CCceE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNH-IQLAKHFEGLVAQDLRFEVVTP--RIFSL 406 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~-~~~a~~l~~~l~~~~~~~~~~~--~~~~~ 406 (486)
.+... +.-.+.+....++.++|+.+-.++ +.++. .++.++|.+.|+++....++.. -...+
T Consensus 316 ~~~~~-------------~T~~gnpl~~Aaa~a~L~~l~~~~---l~~~~~~~~g~~l~~~l~~l~~~~~i~~vrG~Glm 379 (456)
T PRK07480 316 EFNHG-------------FTYSGHPVAAAVALANLRILRDEG---IVERVRDDTGPYLQKRLRELADHPLVGEVRGVGLV 379 (456)
T ss_pred CcccC-------------CCCCcCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHhhcCCCeeeEEeecce
Confidence 00000 011122223334455565554443 34455 3566666666655322211111 11224
Q ss_pred EEEEecCCCCC--c-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHhh
Q 041829 407 VCFRLLPPHND--E-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLARL 483 (486)
Q Consensus 407 v~f~~~~~~~~--~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~~ 483 (486)
+.+.+...... . .........+...+.++|.+ +.+. + ..+|++. ....|++|||+++++|.+++.++.+++
T Consensus 380 ~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll-~~~~---~-~~l~~~P-pl~it~~eid~~~~~l~~al~~~~~~~ 453 (456)
T PRK07480 380 GAIELVKDKATRERFEAGGGVGTICRDHCFANGLI-MRAV---G-DRMIISP-PLVITHAEIDELVEKARKALDATAAEL 453 (456)
T ss_pred EEEEEeccccccccCcchhhHHHHHHHHHHHCCcE-Eeec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 44444221100 0 00112335677778888844 4331 2 4799887 667799999999999999999887654
No 346
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.42 E-value=4.7e-10 Score=114.42 Aligned_cols=306 Identities=11% Similarity=0.054 Sum_probs=172.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
.+.+.++.+.+++.+..-+ ...|+++||||+..|+..||... ++..|+. ....|-...-...
T Consensus 138 ~~~~~~lAe~l~~~~p~~~--------~v~f~~SGsEA~e~AlklAR~~t---------gr~~Ii~~~g~YHG~~~~~~~ 200 (474)
T PLN02482 138 CLLENVLAEMVIDAVPSVE--------MVRFVNSGTEACMGVLRLARAYT---------GREKIIKFEGCYHGHADSFLV 200 (474)
T ss_pred CHHHHHHHHHHHHhCCCCC--------EEEEeCChHHHHHHHHHHHHHhc---------CCCEEEEECCccCCCcchhhh
Confidence 4566777778888874212 48999999999999999998752 2333433 3334542211111
Q ss_pred Hh-------------CCCC---CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hH
Q 041829 194 IG-------------GIHP---QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LL 253 (486)
Q Consensus 194 ~~-------------g~g~---~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~ 253 (486)
.. |+.. ..++.+|. -|+++|++.+++. +..+.+|++.......|.+.| ++
T Consensus 201 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~~---~~~iAavI~Epv~g~~G~i~p~~~fl~ 270 (474)
T PLN02482 201 KAGSGVATLGLPDSPGVPKAATSATLTAPY-------NDLEAVKKLFEAN---KGEIAAVILEPVVGNSGFIVPKKEFLE 270 (474)
T ss_pred hcCCCccccCCCCCCCCCCCCCCCeEEecC-------CChHHHHHHHHhC---CCceEEEEECCCCCCCCCcCCCHHHHH
Confidence 10 1100 01122221 2789999988642 234667777777777888866 56
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcc-ccc
Q 041829 254 ALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPE-FLK 332 (486)
Q Consensus 254 ~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~-yl~ 332 (486)
+|.++|++||+++++|+++.|+ .....+.....++ ..|.+++ -|.++..+++|.+..++ + +.+.+..... +..
T Consensus 271 ~lr~lc~~~g~lLI~DEV~tGf-R~g~~ga~~~~gv-~PDi~t~--gK~lggG~Pigav~g~~-e-i~~~~~~~~~~~~~ 344 (474)
T PLN02482 271 GLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGI-TPDLTTL--GKVIGGGLPVGAYGGRR-E-IMEMVAPAGPMYQA 344 (474)
T ss_pred HHHHHHHHcCCEEEEeccccCe-ecCcchHhHHhCC-CCCEEEe--cchhhCCCceEEEEEcH-H-HHHhhccCCCcccc
Confidence 8999999999999999998764 2221111111233 4687766 59887767788886654 2 2233321111 110
Q ss_pred ccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC---CeEEecCCCceEEEE
Q 041829 333 NKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL---RFEVVTPRIFSLVCF 409 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~---~~~~~~~~~~~~v~f 409 (486)
. ++ .+.+....+..++|+.+..+ +..++..++.++|++.|+++- ++.++.....+++.+
T Consensus 345 ~--------------T~-~gnpl~~aAala~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~g~~~~~~~v~g~~gi 406 (474)
T PLN02482 345 G--------------TL-SGNPLAMTAGIHTLKRLQQP---GTYEYLDKITKKLIQGILEAGKKAGHEMCGGYISGMFGF 406 (474)
T ss_pred c--------------Cc-chhHHHHHHHHHHHHHHhcc---CHHHHHHHHHHHHHHHHHHHHHhcCCCEEEcccceEEEE
Confidence 0 00 11122223344555555332 456677778888888886541 122221122234444
Q ss_pred EecCCCC-C---c-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 410 RLLPPHN-D---E-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 410 ~~~~~~~-~---~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.+..... + . ........++...+.++| +++.+..... + .+ +...|++|||+++++++++..+
T Consensus 407 ~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~G-v~~~~~~~~~----~-~p-sl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 407 FFTEGPVYNFADAKKSDTAKFARFHRGMLEEG-VYLAPSQFEA----G-FT-SLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred EEecCCccChhhhccCCHHHHHHHHHHHHHCC-eEEeccCCCC----C-cC-CCCCCHHHHHHHHHHHHHHHHh
Confidence 4432110 0 0 001233456778888888 5555432211 1 12 5677999999999999988764
No 347
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.42 E-value=1.1e-09 Score=111.91 Aligned_cols=323 Identities=14% Similarity=0.098 Sum_probs=169.9
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+.+.++.+.|++++.-+.. ...+|+++||||+..|+..||... ++..|+ .....|-...-+..
T Consensus 96 ~~~~~~la~~L~~~~p~~~~------~~v~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~ls 160 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFD------KKVLFLNSGAEAVENAVKIARKYT---------KRQGIISFSRGFHGRTLMTMT 160 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCC------CEEEEcCCcHHHHHHHHHHHHHHh---------CCCcEEEECCCcCccchhhhh
Confidence 34555666668888742210 148999999999999999998752 233343 34444644443333
Q ss_pred HhCC--------C--CCCeEEEeCCCC--CCCccC--------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC--
Q 041829 194 IGGI--------H--PQNFRVLKTDSS--TNYSLS--------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-- 251 (486)
Q Consensus 194 ~~g~--------g--~~~v~~v~~~~~--~~~~id--------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-- 251 (486)
..|- + ...+..+|.... ....+. .+.+++.+.... .+..+.+|++.-.....|.+-|
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~iAavi~EPi~g~gG~~~~~~ 239 (451)
T PRK06918 161 MTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEV-APETIAAVVMEPVQGEGGFIVPSK 239 (451)
T ss_pred hcCCCccccccCCCCCCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhc-CCCceEEEEECcccCCCCCccCCH
Confidence 2221 0 012344443210 000111 123343332111 2234566666655555566533
Q ss_pred --hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcc
Q 041829 252 --LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 --l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|.++|++||++++.|..+.++......+....-++ ..|.++ .-|.++..+.+|+++.+.+ +.+.+...
T Consensus 240 ~~l~~l~~l~~~~gillI~DEV~tg~gr~g~~~a~~~~~v-~pDi~t--~sK~l~~G~pig~v~~~~~--i~~~~~~~-- 312 (451)
T PRK06918 240 KFVQEVRNICSEHGILFVADEIQTGFARTGKYFAIEHFDV-VPDLIT--VSKSLGAGVPISGVIGRKE--IMDESAPG-- 312 (451)
T ss_pred HHHHHHHHHHHHcCCEEEEeccccCcCccCceehhHhcCC-CCCEEe--eehhhcCCCccEEEEEcHH--HHhccCCC--
Confidence 88999999999999999999887643221111000111 357554 5698886677899887642 22222110
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCce
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFS 405 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~ 405 (486)
. . .+..++.+.....+.++++.+..+.+ .++..++.+++.+.|++ +|.+.-+ .....
T Consensus 313 -~-~-------------~~T~~g~~l~~aaa~a~l~~i~~~~~---~~~~~~~g~~l~~~l~~l~~~~~~~~~v-rg~G~ 373 (451)
T PRK06918 313 -E-L-------------GGTYAGSPLGCAAALAVLDIIEKENL---NDRAIELGKVVMNRFEEMKNKYNCIGDV-RGLGA 373 (451)
T ss_pred -C-c-------------CcCCCcCHHHHHHHHHHHHHHHHCCH---HHHHHHHHHHHHHHHHHHHhhCCCceee-cccee
Confidence 0 0 00011222222233334554433333 33444555666665554 3322222 23344
Q ss_pred EEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 406 LVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 406 ~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
++.+.+...............++...+.++|..+.....+ + .++|+++ ....|+++|++++++|.++++++.++
T Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~Gvlv~~~~~~-~-~~lrl~p-~l~~t~~~id~~l~~l~~~l~~~~~~ 447 (451)
T PRK06918 374 MCAFELVQDRKTKEPDKTLTANICKEANKRGLLLLSAGTY-G-NVIRVLM-PLVITDEQLEEGLTIIEESLQACYEK 447 (451)
T ss_pred EEEEEEccCCCcCCCcHHHHHHHHHHHHHCCeEEeecCCC-C-CEEEEEC-CCccCHHHHHHHHHHHHHHHHHHHHh
Confidence 4555442110000001234567777888888544332222 2 5799998 55578999999999999999877543
No 348
>PRK06917 hypothetical protein; Provisional
Probab=99.42 E-value=1.8e-09 Score=110.02 Aligned_cols=332 Identities=13% Similarity=0.099 Sum_probs=179.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
++.+.++.+.|++++....+ ..+|+++||+|+..|+..||.....+ +.. ++..|+. ....|-...-+..
T Consensus 73 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~r-g~t--~r~~ii~~~~~yHG~t~~als 142 (447)
T PRK06917 73 SEPAEKLAKKLSDLSPGDLN-------WSFFVNSGSEANETAMKIAIQHFQER-GIQ--GKHKILSRWMSYHGITMGALS 142 (447)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCChHHHHHHHHHHHHHHHHhc-CCC--CCCEEEEECCCcCCccHHHHH
Confidence 45556677778888743222 47999999999999999998753221 111 2333443 4444644444443
Q ss_pred HhCCCC---------CCeEEEeCCCCCCCc------------cCHHHHHHHHHHHHhCCCccEEEEEecCCccc-cccCC
Q 041829 194 IGGIHP---------QNFRVLKTDSSTNYS------------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSS-TAVDP 251 (486)
Q Consensus 194 ~~g~g~---------~~v~~v~~~~~~~~~------------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t-G~id~ 251 (486)
..|... ..+..+|.... ++ -+.+.+++.+++.. ...+.+|++.-..... |.+-|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~le~~i~~~~--~~~iAAvi~EPi~g~~gG~~~p 218 (447)
T PRK06917 143 MSGHPLRRQRFVSLLEDYPTISAPYC--YRCPVQKVYPTCQLACATELETAIERIG--AEHIAAFIAEPIIGAAGAAVVP 218 (447)
T ss_pred hcCCccccccCCCCCCCCeEeCCCcc--cccccCCChHHHHHHHHHHHHHHHHhcC--CCceEEEEEeccccCcCceecC
Confidence 333210 11233332110 11 12456666665321 1245666666544333 44433
Q ss_pred ----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcC
Q 041829 252 ----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLST 326 (486)
Q Consensus 252 ----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~ 326 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++ -|.++..+ +.|+++.+++ +.+.+..
T Consensus 219 ~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv-~PDi~~~--gK~l~~G~~Pi~a~~~~~~--i~~~~~~ 293 (447)
T PRK06917 219 PKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGV-EPDIMTL--GKGLGAGYTPIAATVVSDR--VMEPILR 293 (447)
T ss_pred CHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCC-CCCEEEe--eehhccCCcceEEEEEcHH--HHHHHhc
Confidence 89999999999999999999876432221111111233 4688776 58887654 5788877653 2233322
Q ss_pred CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CC
Q 041829 327 NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTP--RI 403 (486)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~--~~ 403 (486)
....+... +...+.+....++.++++.+..+ +++++..++.++|.+.|+++. ...++.. -.
T Consensus 294 ~~~~~~~~-------------~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~ 357 (447)
T PRK06917 294 GSRSIMSG-------------HTLSANPLSAATALAVLEYMEKH---NLPEKAAEKGEYLIKGLQKVQQQSTIIGDVRGK 357 (447)
T ss_pred cCcccccc-------------cCCCCCHHHHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeec
Confidence 11111100 00112222233444555555333 355667777777777776532 1211111 12
Q ss_pred ceEEEEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeE----CCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 404 FSLVCFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVL----SGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 404 ~~~v~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~----~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
..++.+.+..... +. ....+....+...+.++|.+ +.+... .....+|++. ...+|++|||.+++++.+++
T Consensus 358 Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl-~~~~~~~~~g~~~~~i~l~P-pl~it~~eid~~~~~l~~~l 435 (447)
T PRK06917 358 GLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLL-LYPAVAGQDGKEGDAVIIAP-PMTITYSELDELLSIFAKSV 435 (447)
T ss_pred ceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcE-EEecccccCCCCCCEEEEEC-CCcCCHHHHHHHHHHHHHHH
Confidence 2344454432110 00 00124556788888888844 433211 1135899987 66789999999999999999
Q ss_pred HHHHHhh
Q 041829 477 SALLARL 483 (486)
Q Consensus 477 ~~l~~~~ 483 (486)
+++.++.
T Consensus 436 ~~~~~~~ 442 (447)
T PRK06917 436 EEMMQKG 442 (447)
T ss_pred HHHHHhc
Confidence 8876543
No 349
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.41 E-value=1.7e-09 Score=110.43 Aligned_cols=317 Identities=12% Similarity=0.108 Sum_probs=177.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++.+.++.+.|+++++.+.+ ..+|++|||+|+..|+..||... | +..+|......|-....+...
T Consensus 112 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~a~s~ 176 (459)
T PRK06082 112 NETAIECAEKLTEIAGGELN-------RVLFAPGGTSAIGMALKLARHIT-------G-NFKVVSLWDSFHGASLDAISV 176 (459)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEECCCcHHHHHHHHHHHHHhc-------C-CCEEEEEeCCCcCccHHHHhh
Confidence 45555666668888853222 48999999999999999998641 1 223344455556655444443
Q ss_pred hCCC---------CCCeEEEeCCCCCCCc-----c------CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---
Q 041829 195 GGIH---------PQNFRVLKTDSSTNYS-----L------SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP--- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~~~~-----i------d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~--- 251 (486)
.|-. ...+..+|... .++ . +++.|++.+++ .+ .+.+|++.......+.+.|
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~i~~---~~-~vAavIvEPv~g~g~~~~~~~y 250 (459)
T PRK06082 177 GGEACFRQGMGPLMAGVERIPPAV--SYRGAFPDADGSDVHYADYLEYVIEK---EG-GIGAFIAEAVRNTDVQVPSKAY 250 (459)
T ss_pred cCCcccccCCCCCCCCCEEeCCCc--ccccccCChhHHHHHHHHHHHHHHhc---CC-CEEEEEECCccCCCCcCCCHHH
Confidence 3320 01234444221 011 1 13456666642 12 3556666655444233444
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
+++|.++|++||+.+++|+++.|+.-...-+.....++ ..|.+++ -|.++..+ +.|.++.++. +...+. ..+
T Consensus 251 l~~lr~lc~~~g~llI~DEV~tG~GRtG~~fa~e~~gv-~PDiv~~--gKgl~gG~~P~~av~~~~~--i~~~~~--~~~ 323 (459)
T PRK06082 251 WKRVREICDKHNVLLIIDEIPNGMGRTGEWFTHQAYGI-EPDILCI--GKGLGGGLVPIAAMITKDK--YNTAAQ--ISL 323 (459)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCccchhhHhHhhCC-CCCEEEe--cccccCCCCcceEEEEcHH--HHhhcc--CCC
Confidence 89999999999999999999887532211111111234 4788875 59887663 6788888753 222211 000
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-eEEecC--CCceEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR-FEVVTP--RIFSLV 407 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~-~~~~~~--~~~~~v 407 (486)
...|. .+.+.....+.++++.+..+ +++++..++.++|.+.|+++.. ..++.. -...++
T Consensus 324 --------------~~~T~-~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Gl~~ 385 (459)
T PRK06082 324 --------------GHYTH-EKSPLGCAAALATIEVIEQE---GLLEKVKADSQFMRERLLEMKAKYPLIGDVRGIGLLW 385 (459)
T ss_pred --------------CCCCC-CcCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhhCCCeeeeeecccee
Confidence 00011 12222223344455555333 3566777788888888866311 111111 122344
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
.+.+................+...+.++|.+ +.+. +..++|++. -...|++||++++++++++..++.++
T Consensus 386 ~ve~~~~~~~~~~~~~~~~~~~~~~~~~Gvl-~~~~---~~~~i~~~P-pl~it~~eid~~~~~l~~~l~~~~~~ 455 (459)
T PRK06082 386 GVELVTDRHTKERAYDEAEAVLYRCLNNGLS-FKVS---QGNVIQLSP-PLIITREELTQALAILEEAIAKICQD 455 (459)
T ss_pred EEEEccCccccCccHHHHHHHHHHHHhCCCE-EEec---CCCEEEEeC-CCccCHHHHHHHHHHHHHHHHHHhhh
Confidence 5555321100000123446677788888854 4332 235899987 56789999999999999999887654
No 350
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.40 E-value=1.7e-09 Score=109.60 Aligned_cols=316 Identities=15% Similarity=0.113 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~ 193 (486)
.+.+.++.+.|++++..... ...+|+++||+|+..|+..||... ++..|+ .....|-...-+..
T Consensus 82 ~~~~~~la~~l~~~~p~~~~------~~~~f~~sGseA~e~AlklAr~~t---------gr~~ii~~~~~yHG~t~~~~s 146 (421)
T PRK09792 82 YESYVTLAEKINALAPVSGQ------AKTAFFTTGAEAVENAVKIARAHT---------GRPGVIAFSGGFHGRTYMTMA 146 (421)
T ss_pred CHHHHHHHHHHHHhCCCCCC------ceEEEeCChHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHh
Confidence 34445555667887643211 147899999999999999998641 233343 34445654333333
Q ss_pred HhCC--------C--CCCeEEEeCCCCCCCcc----CHHHHHHHHHHHHhCCCccEEEEEecCCccccccC-C---hHHH
Q 041829 194 IGGI--------H--PQNFRVLKTDSSTNYSL----SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD-P---LLAL 255 (486)
Q Consensus 194 ~~g~--------g--~~~v~~v~~~~~~~~~i----d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id-~---l~~I 255 (486)
..|. + ...++.+|...+.. .+ +++.+++.+++.. ....+.+|++....+++|.+- | +++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~v~~p~~~~-~~~~~~~~~~l~~~~~~~~-~~~~iaavi~EPvq~~~G~~~~~~~~l~~l 224 (421)
T PRK09792 147 LTGKVAPYKIGFGPFPGSVYHVPYPSDLH-GISTQDSLDAIERLFKSDI-EAKQVAAIIFEPVQGEGGFNVAPKELVAAI 224 (421)
T ss_pred hcCCCcccccCCCCCCCCcEEcCCCcccc-cccHHHHHHHHHHHHHhcc-CCCceEEEEEccccCCCCCccCCHHHHHHH
Confidence 3221 1 01244455432211 12 3467777765421 123466788887777888653 5 8999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccc
Q 041829 256 GNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKA 335 (486)
Q Consensus 256 ~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~ 335 (486)
.++|++||+++++|..+.++.....-+....-++ ..|.+++ -|.++..+..|+++.+++ +.+.+.. ....
T Consensus 225 ~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~-~pDi~t~--gK~l~~G~pigav~~~~~--i~~~~~~--~~~~--- 294 (421)
T PRK09792 225 RRLCDEHGIVMIADEVQSGFARTGKLFAMDHYAD-KPDLMTM--AKSLAGGMPLSGVVGNAN--IMDAPAP--GGLG--- 294 (421)
T ss_pred HHHHHHcCCEEEEeccccCCCCCCchhHHHhcCC-CCcEEEe--ehhhcCCCceEEEEEcHH--HHhccCC--CCcC---
Confidence 9999999999999999887543221111000112 4676555 699976677888877543 2222211 0000
Q ss_pred cccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEe
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRL 411 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~ 411 (486)
.+. .+.+....+..++++.+..+ +++++..++.+++.+.|+. .|.+.-+ .-...++.+.+
T Consensus 295 -----------~T~-~gnpl~~aaa~a~l~~l~~~---~~~~~~~~~g~~l~~~l~~l~~~~p~v~~v-rG~Gl~~~ie~ 358 (421)
T PRK09792 295 -----------GTY-AGNPLAVAAAHAVLNIIDKE---SLCERANQLGQRLKNTLIDAKESVPAIAAV-RGLGSMIAAEF 358 (421)
T ss_pred -----------CCC-CCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHHHhCCCccee-cccceEEEEEe
Confidence 011 11122222333555555333 4555666677777766654 4432111 11133555666
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
....... .......++...+.++|.+. .+.. ....++|+.. ....+++||++++++|.+++.
T Consensus 359 ~~~~~~~-~~~~~~~~l~~~~~~~Gv~i-~~~g-~~~~~irl~P-~l~i~~~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 359 NDPQTGE-PSAAIAQKIQQRALAQGLLL-LTCG-AYGNVIRFLY-PLTIPDAQFDAAMKILQDALS 420 (421)
T ss_pred cCCccCC-cchHHHHHHHHHHHHCCcEE-eecC-CCCCEEEEeC-CCcCCHHHHHHHHHHHHHHHh
Confidence 4321000 01134577888888899544 3211 1136899987 666899999999999988763
No 351
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=2.5e-11 Score=114.21 Aligned_cols=311 Identities=12% Similarity=0.109 Sum_probs=192.5
Q ss_pred cccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchh
Q 041829 108 WITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSA 187 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s 187 (486)
|..--..-.+|+. +++++|.+.+ ++.+-|-.++..++-+ ..+ .+++|++.+..+..
T Consensus 135 YGt~DvHldlE~~----iakF~G~E~a---------ivYs~gF~ti~S~ipa-fsK----------rGDIi~~de~~nfa 190 (467)
T KOG1358|consen 135 YGTIDVHLDLEKR----IAKFMGTEDA---------IVYSYGFSTIESAIPA-FSK----------RGDIIFVDEAVNFA 190 (467)
T ss_pred cccceeecccHHH----HHHhhCCcce---------eeeccccchhhhcchh-hhc----------cCcEEEEehhhhHH
Confidence 3333344567777 9999999874 4444443333333332 222 68899999999999
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHH----hCCC---ccEEEEEecCCccccccCChHHHHHHHH
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDL----TIGL---IPFFLCATVGTTSSTAVDPLLALGNIAK 260 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~----~~g~---~p~~vv~~~~~t~tG~id~l~~I~~ia~ 260 (486)
+.++.++..- .+++.. +.|+++|+..+.+.+ ++.+ .-.+|++..-.-++|.+-|+.+|.++..
T Consensus 191 Iq~GlqlSRS---~i~~Fk-------hndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~ 260 (467)
T KOG1358|consen 191 IQKGLQLSRS---TISYFK-------HNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKN 260 (467)
T ss_pred HHHHHhhhhh---eeEEec-------CCCHHHHHHhccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHh
Confidence 9999887655 666665 458888887765433 2111 1357888888899999999999999999
Q ss_pred HhCCEEEeeccccchhccCccch----hcccCCcCCCceeeecccccCCCCcceEEEEeCchHH-HHHhcCCcccccccc
Q 041829 261 SNGMWFHVDAAYAGSACICPEYR----QYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTL-IQSLSTNPEFLKNKA 335 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~~~~----~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~-~~~~~~~~~yl~~~~ 335 (486)
||...+++|..+..+.+.. ..+ +.-..+...|.++.+.--.+. +.|.+.+.+.... .+.+ ...+|.
T Consensus 261 Kyk~RvildEs~SfG~lg~-~GrGvteH~~v~~~~iDiv~~sm~~ala---s~GgFc~G~~~i~~hQrL-Sg~~Y~---- 331 (467)
T KOG1358|consen 261 KYKFRVILDESLSFGVLGK-TGRGVTEHFGVPITDIDIVTASMETALA---SGGGFCAGKSFIADHQRL-SGSGYC---- 331 (467)
T ss_pred hheEEEEEecccccccccc-cCccccccCCCCccceeeeeeccccccc---ccCceeecceeeEeeeec-ccccee----
Confidence 9999999999887554321 111 111224567888877544332 2333333321100 0000 011222
Q ss_pred cccCCccCCCCCccCCCCCCCcH---HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEec
Q 041829 336 SQANMVVDYKDWQIPLGRRFRSL---KLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLL 412 (486)
Q Consensus 336 ~~~~~~~~~~~~~~~~sr~~~~l---~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~ 412 (486)
.|+..-+. ++..++..+- .-.++++........+.+.|+...++++.+.+..+++-.++.
T Consensus 332 ---------------fSAslPp~la~aa~~ai~i~~--~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~ 394 (467)
T KOG1358|consen 332 ---------------FSASLPPYLAGAAIKAILIEE--WNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLE 394 (467)
T ss_pred ---------------eeccCchhhhhhHHHHHHHHh--hCcchhhhhhccccccchhhhcCCceEEecCcCCceeeeeec
Confidence 22222222 2222333221 112355566667778888888888899999999999988887
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeE------CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL------SGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~------~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+...+.++...+-+++.++...++........+ .-..-+|+|+ +...++++++++.+.|++.+..+
T Consensus 395 ~~~~s~e~e~~lL~eivd~~i~~~~ll~~a~~~~~~e~~~~~pSiri~~-~a~~seeel~ra~~~ik~~~~~~ 466 (467)
T KOG1358|consen 395 RSYGSREKEEKLLEEIVDKCIAEGVLLTRAKYLEKLERCPIPPSIRICV-SAGMSEEELERAAELIKEVASAV 466 (467)
T ss_pred ccccchHHHHHHHHHHHHHHHhhcceehhhhhhhhcccCCCCCcEEEEE-eCCCCHHHHHHHHHHHHHHHHhh
Confidence 654333333444556666665565333222211 1235799999 88899999999999999987654
No 352
>PRK07481 hypothetical protein; Provisional
Probab=99.39 E-value=1.8e-09 Score=110.15 Aligned_cols=333 Identities=13% Similarity=0.093 Sum_probs=176.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++.+.++.+.|+++++-+.- ...+|++|||||+..|+..||..... .+..+ +..+|......|-...-+...
T Consensus 85 ~~~~~~lae~L~~~~~~~~~------~~v~f~~sGsEAve~AlklAr~~~~~-~g~~~-r~~ii~~~~~yHG~t~ga~s~ 156 (449)
T PRK07481 85 HPRAIELSYELIDMFAPEGM------RRVFFSSGGSDSVETALKLARQYWKV-RGQPE-RTKFISLKQGYHGTHFGGASV 156 (449)
T ss_pred CHHHHHHHHHHHHhcCCCCC------CEEEEcCchHHHHHHHHHHHHHHHHh-cCCCC-CcEEEEECCCcCCcchhhhcc
Confidence 34455566668888742111 14799999999999999999875321 11111 223344444456443333322
Q ss_pred hCCC---------CCCeEEEeCCCCC--CCc-cCHHHHHHHHHHH----H--hCCCccEEEEEecCCccccccCC----h
Q 041829 195 GGIH---------PQNFRVLKTDSST--NYS-LSPDSLAEAISRD----L--TIGLIPFFLCATVGTTSSTAVDP----L 252 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~--~~~-id~~~L~~~i~~~----~--~~g~~p~~vv~~~~~t~tG~id~----l 252 (486)
.|-. ...+..+|....- .|. -|++.+++.+.+. . ..+..+.+|++.-.....|.+-| +
T Consensus 157 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl 236 (449)
T PRK07481 157 NGNTVFRRNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFW 236 (449)
T ss_pred CCCcccccccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHH
Confidence 2110 0123334332100 011 2555554433211 1 12345677777776667777755 8
Q ss_pred HHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcccc
Q 041829 253 LALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 253 ~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
++|.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++. |.++..+ +.|+++++++ +.+.+......-
T Consensus 237 ~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~~--i~~~~~~~~~~~ 311 (449)
T PRK07481 237 PLVREVCDRHGILLIADEVVTGFGRTGSWFGSRGWGV-KPDIMCLA--KGITSGYVPLGATMVNAR--IADAFEANADFG 311 (449)
T ss_pred HHHHHHHHHcCCEEEEeehhhCcCcCchhhHhhhcCC-CCCEEEEe--ecccCCCcCceEEEEcHH--HHHHHhccCccc
Confidence 9999999999999999998876532211111111233 47888874 8887653 5788888753 223332110000
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCceEEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTP--RIFSLVC 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~--~~~~~v~ 408 (486)
. .+...+...+.+....++.++++.+..+ +.+++..++.++|.+.|+++. ...++.. -...++.
T Consensus 312 --------~--~~~h~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vrG~Glm~g 378 (449)
T PRK07481 312 --------G--AIMHGYTYSGHPVACAAALATLDIVVRE---DLPANAAKRGAYLLEGLQPLKERFELVGDVRGKGLMLA 378 (449)
T ss_pred --------c--ccccCCCCCCCHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHHHHHhhcCCCeEEEeecceEEE
Confidence 0 0000001112222233444555555333 355667777788887776642 1222211 1223444
Q ss_pred EEecCCC--CCc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPH--NDE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 409 f~~~~~~--~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.+.... .+. .........+...+.++| +++.+. + ..+|++. ....|++|||.++++|.++++++
T Consensus 379 i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G-vl~~~~---g-~~i~l~P-pl~it~~eid~~~~~l~~~l~~~ 446 (449)
T PRK07481 379 LDLVADKATREPIDPSKGYANAVADVARENG-VLVRPS---G-TKIILSP-PLVIQREDVDRIVDALDAGLSAV 446 (449)
T ss_pred EEecccccccCCCCchhHHHHHHHHHHHhCC-eEEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHhc
Confidence 5543211 000 001234567778888888 444332 2 2578876 55679999999999999988764
No 353
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.39 E-value=4.2e-10 Score=114.07 Aligned_cols=311 Identities=12% Similarity=0.069 Sum_probs=170.8
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCC
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGI 197 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~ 197 (486)
..++.+.++++++-+-+ ..+|+.+||+|+..|+..||...... +..+ +..+|..+...|-...-+....|-
T Consensus 90 ~~~la~~l~~~~~~~~~-------~v~f~~sGseA~e~AlklAr~~~~~~-~~~~-r~~il~~~~~yHG~t~~~~s~~~~ 160 (427)
T TIGR00508 90 AIELCQKLVKMTPNALD-------CVFLADSGSVAVEVALKMALQYWQAK-GEKN-RQKFLTIRSGYHGDTFGAMSVCDP 160 (427)
T ss_pred HHHHHHHHHhhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhh-CCCC-ccEEEEEcCCcCCccHhhhcccCC
Confidence 34455668888753222 48999999999999999999754221 1110 233444555556544333332221
Q ss_pred C----------CCCeEEEeCCCCCCC-----ccCHHHHHHHHHHHHhCCCccEEEEEecC-Cccccc----cCChHHHHH
Q 041829 198 H----------PQNFRVLKTDSSTNY-----SLSPDSLAEAISRDLTIGLIPFFLCATVG-TTSSTA----VDPLLALGN 257 (486)
Q Consensus 198 g----------~~~v~~v~~~~~~~~-----~id~~~L~~~i~~~~~~g~~p~~vv~~~~-~t~tG~----id~l~~I~~ 257 (486)
. ...+..+|.... .+ .-|++++++.+.+. +....+|++... ....|. .+++++|.+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~l~~~l~~~---~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~ 236 (427)
T TIGR00508 161 ENSMHSLYKGYLPEQIFAPAPQN-RFDEEWNEEAITPLAKLMELH---SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQA 236 (427)
T ss_pred cccccccccccCCCCeEcCCCCc-cccchhHHHHHHHHHHHHHhc---CCcEEEEEEechhcCcCCcccCCHHHHHHHHH
Confidence 0 012223332111 11 12567777777542 223455665543 333343 367999999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCC--ccccccc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTN--PEFLKNK 334 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~--~~yl~~~ 334 (486)
+|++||+.+++|.++.|+.....-+.....++ ..|.+++ -|.++..+ .++.++.++. +.+.+... ..+....
T Consensus 237 lc~~~~~llI~DEv~tG~Gr~G~~~~~~~~~v-~pDi~~~--gK~l~gG~~p~~a~~~~~~--~~~~~~~~~~~~~~~~~ 311 (427)
T TIGR00508 237 LCKQYDILLIADEIATGFGRTGKLFACEHAGV-VPDILCV--GKALTGGYMTLSATVTTDK--VAQTISSGEAGCFMHGP 311 (427)
T ss_pred HHHHcCCEEEEeccccCCCcCCccchhhhcCC-CCCEEEe--chhhhcCcccceEEEEcHH--HHHHHhcCCCCccccCC
Confidence 99999999999999865322111111111233 4687775 68886553 5666666543 22333221 1111100
Q ss_pred ccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEEEEec
Q 041829 335 ASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVCFRLL 412 (486)
Q Consensus 335 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~f~~~ 412 (486)
+. .+.+.....+.++++.+..+ +..++..++.++|++.|+++.....+.. ....++.+.+.
T Consensus 312 -------------T~-~g~p~~~aaa~a~l~~l~~~---~~~~~~~~~~~~l~~~L~~l~~~~~i~~vrg~G~~~~i~~~ 374 (427)
T TIGR00508 312 -------------TF-MGNPLACAVAEASLAILLEG---EWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVVEMY 374 (427)
T ss_pred -------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCEEeEeccccEEEEEEC
Confidence 00 12222333445555554333 3457778888889888877532111111 12345555553
Q ss_pred CCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 413 PPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 413 ~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
.. .....+.+++.++| +++.+. + ..+|++. ...+|++|||++++++++++.
T Consensus 375 ~~--------~~~~~~~~~l~~~G-v~~~~~---~-~~l~~~p-pl~~t~~~id~~~~~l~~~l~ 425 (427)
T TIGR00508 375 KP--------VNVEELQKKFVEQG-VWIRPF---G-KLIYVMP-PYIITTEQLQKLTAALIEALH 425 (427)
T ss_pred Cc--------cCHHHHHHHHHHCC-eEEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHh
Confidence 21 11256778888888 455432 2 3689987 667899999999999998864
No 354
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=3.6e-09 Score=107.82 Aligned_cols=326 Identities=11% Similarity=0.086 Sum_probs=177.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+...++.+.|+++++-+.. ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+....
T Consensus 97 ~~~~~lAe~L~~~~p~~~~-------~v~f~~sGseAve~AlKlA~~~~~~r-g~~~-r~~Ii~~~~~yHG~t~gals~~ 167 (453)
T PRK06943 97 EPAIELAERLAALTGGTLG-------HAFFASDGASAVEIALKMSFHAWRNR-GRGD-KREFVCLANGYHGETIGALGVT 167 (453)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEeCCCHHHHHHHHHHHHHHHHHh-CCCC-CCEEEEECCCcCCCcHHhhccc
Confidence 3445556668887753322 48999999999999999998753211 1111 2223444444564433333322
Q ss_pred CCC---------CCCeEEEeCCCCCC--Cc--------cCHHHHHHHHHHHHhCCCccEEEEEec-CCccccccCC----
Q 041829 196 GIH---------PQNFRVLKTDSSTN--YS--------LSPDSLAEAISRDLTIGLIPFFLCATV-GTTSSTAVDP---- 251 (486)
Q Consensus 196 g~g---------~~~v~~v~~~~~~~--~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~-~~t~tG~id~---- 251 (486)
|-. ...+..+|...... +. -++++|++.++. .+..+.+|++.- .....|.+-|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAviiEPvvqg~gG~~~~~~~y 244 (453)
T PRK06943 168 DVALFKDAYDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAE---RAGKIAALIVEPLVQCAAGMAMHDPSY 244 (453)
T ss_pred CChhhhcccccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEeccccccCCcccCCHHH
Confidence 210 01233444321100 00 134667777753 233456666665 2555676633
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
++++.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..+ +.|.++.+++ +.+.+.....
T Consensus 245 l~~lr~lc~~~gillI~DEV~TG~GRtG~~fa~~~~gv-~PDivt~g--Kgl~gG~~Pi~av~~~~e--i~~~~~~~~~- 318 (453)
T PRK06943 245 LRGLRALCDRYGVHLIADEIAVGCGRTGTFFACEQAGV-WPDFLCLS--KGISGGYLPLSLVLSRDA--IFAAFYDDDV- 318 (453)
T ss_pred HHHHHHHHHHcCCEEEeechhhCCCCCcchhHHHhCCC-CCCeEeee--hhhccCcccceEEEEcHH--HHHhhcccCc-
Confidence 89999999999999999999876533221111111234 58998884 8887663 6888888764 2233321100
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC---CCeEEecCCCceEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD---LRFEVVTPRIFSLV 407 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~---~~~~~~~~~~~~~v 407 (486)
. . .+...+.-.+.+.......++|+.+-.+ .++++..++.++|.+.|+++ |.+.-+ .-...++
T Consensus 319 ------~-~---~~~~~~T~~gnpl~~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~v-rG~Gl~~ 384 (453)
T PRK06943 319 ------T-R---GFLHSHSYTGNPLACRAALATLDLFAED---DVLARNARKSARLRAALAPLAAHPQVRHL-RQRGTIF 384 (453)
T ss_pred ------c-C---CccCCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEeE-eccccEE
Confidence 0 0 0000000112122222334445444333 35566677777777777654 333211 1122244
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHHh
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLAR 482 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~~ 482 (486)
.+.+.... +. ......++...+.++|.+ +.+. + ..+|++. ....|++|||+++++|++.+.++.++
T Consensus 385 gvel~~~~-~~--~~~~~~~i~~~~~~~Gll-~~~~---g-~~l~~~P-pl~it~~eid~~~~~l~~al~~~~~~ 450 (453)
T PRK06943 385 AFDVALDG-DA--ARTFSRRFFEAALERELL-LRPI---G-TTVYLMP-PYVLDDDEIAWLAERTRATLDATLAE 450 (453)
T ss_pred EEEEccCC-Cc--chHHHHHHHHHHHHCCcE-EEec---C-CEEEEeC-CCcCCHHHHHHHHHHHHHHHHHHHHh
Confidence 44443211 00 123456788888888844 4332 2 3699986 66789999999999999999887543
No 355
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.39 E-value=8.8e-10 Score=111.51 Aligned_cols=316 Identities=12% Similarity=0.074 Sum_probs=175.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+.+.++.+.|++++..+.+ ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+....
T Consensus 87 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGseAve~AlklAr~~~~~~-g~~~-r~~ii~~~~~yHG~t~~a~s~~ 157 (429)
T PRK06173 87 EPAVELAQKLLEILPPSLN-------KIFFADSGSVAVEVAMKMALQYQQAK-GEVQ-RTKFATIRSGYHGDTWHAMSVC 157 (429)
T ss_pred HHHHHHHHHHHhhCCCCcC-------EEEEeCCchHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCCcchhhhccC
Confidence 3445555667777642211 48999999999999999999753211 1111 2223444444565433332221
Q ss_pred C--------C--CCCCeEEEeCCCCC---CC-ccCHHHHHHHHHHHHhCCCccEEEEEecC-CccccccCC----hHHHH
Q 041829 196 G--------I--HPQNFRVLKTDSST---NY-SLSPDSLAEAISRDLTIGLIPFFLCATVG-TTSSTAVDP----LLALG 256 (486)
Q Consensus 196 g--------~--g~~~v~~v~~~~~~---~~-~id~~~L~~~i~~~~~~g~~p~~vv~~~~-~t~tG~id~----l~~I~ 256 (486)
| . ....+..+|..... .+ .-+++.|++.+.. .+..+.+|++.-. ....|.+-| +++|.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~---~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~ 234 (429)
T PRK06173 158 DPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQ---KGDEIAALILEPVVQGAGGMYFYSPTYLVKAR 234 (429)
T ss_pred CCchhhhhcccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHh---CCCcEEEEEEcchhhccCCcccCCHHHHHHHH
Confidence 1 0 01123344432110 00 1146667777753 2334566666653 455566633 89999
Q ss_pred HHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc--ccccc
Q 041829 257 NIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP--EFLKN 333 (486)
Q Consensus 257 ~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~--~yl~~ 333 (486)
++|++||+++++|.++.|+.-...-+.....++ ..|.+++ -|.++..+ .++.++.+++ +.+.+.... .+...
T Consensus 235 ~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~p~~a~~~~~~--i~~~~~~~~~~~~~~~ 309 (429)
T PRK06173 235 ELCDQYGVLLIFDEIATGFGRTGKLFALEHAGV-VPDIMCI--GKALTGGYLTLSATITTEA--IAQTICSGEAKCFMHG 309 (429)
T ss_pred HHHHHcCCeEEecchhcCCCcCCcchHHHhcCC-CCCEEEe--ehhhhCCccccceEEecHH--HHHHHhcCCCCccccC
Confidence 999999999999999865321111111111233 4687774 68886553 5777777653 222322110 11110
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEEEEe
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVCFRL 411 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~f~~ 411 (486)
. |. .+.+.....+.++++.+-.+ ...++..++.++|++.|+++.++..+.+ ....++.+.+
T Consensus 310 ~-------------T~-~g~p~~~aaa~a~l~~i~~~---~~~~~~~~~g~~l~~~L~~~~~~~~v~~vRg~Gl~~~iel 372 (429)
T PRK06173 310 P-------------TF-MANPLACAIAAESIRLLLES---PWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVVEM 372 (429)
T ss_pred C-------------CC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccceEEEEEe
Confidence 0 00 12222333455556655333 3466778888899888875433332221 2334555665
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
... .....+.+.+.++| +++.+. + .++|+.. ....|++|+++++++|++++.++
T Consensus 373 ~~~--------~~~~~i~~~l~e~G-i~v~~~---g-~~l~~~P-pl~it~~ei~~~~~~l~~~l~~~ 426 (429)
T PRK06173 373 KEP--------VNMATLQPRFVEHG-IWVRPF---G-KLVYIMP-PFIISPDELSQLTSGLLRVLKQE 426 (429)
T ss_pred CCc--------ccHHHHHHHHHHCC-eEEEec---C-CEEEEeC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 421 11356778888888 455432 2 4899988 77889999999999999988764
No 356
>PRK06148 hypothetical protein; Provisional
Probab=99.38 E-value=7.9e-10 Score=122.86 Aligned_cols=323 Identities=15% Similarity=0.149 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
.+.+.++.+.|++++.-+.+ ..+|++||||||..|+..||... | ++.+|......|-...-+..+
T Consensus 662 ~~~~~~lAe~L~~~~p~~~~-------~v~f~nSGsEA~e~AlklAr~~t-------G-r~~ii~~~~~YHG~t~~a~s~ 726 (1013)
T PRK06148 662 HDAIVAYAERLTATLPDGLT-------VAFFVNSGSEANSLALRLARAHT-------G-QRDAIVLDHAYHGTTTELIDL 726 (1013)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHhc-------C-CCeEEEEcCCccCCCcchhhc
Confidence 34455566668887742222 37999999999999999999752 1 222333344445433222221
Q ss_pred h--------CCC-CCCeEEEeCCCC--CCCc-cC-------HHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 195 G--------GIH-PQNFRVLKTDSS--TNYS-LS-------PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 195 ~--------g~g-~~~v~~v~~~~~--~~~~-id-------~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
. +.+ ...+..++.... ..|. -| .+.++++++.....+..+.+|++.......|.+-|
T Consensus 727 s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~y 806 (1013)
T PRK06148 727 SPYKFNRKGGKGRPDHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGY 806 (1013)
T ss_pred CchhhcccCCCCCCCCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHH
Confidence 1 111 123333332100 0011 11 24566666543333455777887776667788866
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCcc-chhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPE-YRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~-~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
+++|.++|++||+.+++|+.+.|+.-.... +.....++ ..|.+++ -|.++..++.|+++.+++ +.+.+.....|
T Consensus 807 l~~lr~lc~~~g~llI~DEVqtGfGRtG~~~~a~e~~gv-~PDivt~--gK~lggG~Plgav~~~~e--i~~~~~~g~~~ 881 (1013)
T PRK06148 807 LREVYAMVRAAGGVCIADEVQVGFGRVGSHWWAFETQGV-VPDIVTM--GKPIGNGHPMGAVVTTRE--IADSFDNGMEY 881 (1013)
T ss_pred HHHHHHHHHHhCCEEEEEecccCCCCCCCcchhhhhcCC-Ccceeee--cccccCCcceEEEEEcHH--HHhhccCCCcc
Confidence 999999999999999999998765322211 11111233 5788887 488877788999988743 33333211001
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecC--CCceEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTP--RIFSLV 407 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~--~~~~~v 407 (486)
. +.-.+.+....+..++++.+-.+ ++.++..++.++|++.|+++. ...++.. -...++
T Consensus 882 ~----------------~Tf~gnpla~aaa~a~L~~i~~e---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Gl~~ 942 (1013)
T PRK06148 882 F----------------NTFGGNPVSCAIGLAVLDIIEDE---DLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFL 942 (1013)
T ss_pred c----------------cCCCCCHHHHHHHHHHHHHHhhc---cHHHHHHHHHHHHHHHHHHHHHhCCCceEEeeeceEE
Confidence 0 00112222333444555555444 355666777788877776531 1111111 112344
Q ss_pred EEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 408 ~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
.+.+................+.+.+.++| +++.+.... ..++|+.. ...+|++|||+++++|.+++.++
T Consensus 943 gvel~~~~~~~~~~~~~~~~i~~~~~~~G-vl~~~~g~~-~~vlr~~P-pl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 943 GIELVTDRKTKAPATAIARYVKNGARERG-ILIGTEGPH-DNVLKIRP-PLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred EEEecCCccccCccHHHHHHHHHHHHhCC-eEEeccCCC-CCEEEEeC-CccCCHHHHHHHHHHHHHHHHHH
Confidence 45543211100112344567888888888 444433222 25899998 78899999999999999988765
No 357
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.36 E-value=2.7e-09 Score=109.05 Aligned_cols=325 Identities=12% Similarity=0.087 Sum_probs=176.7
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEc-CchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQ-GTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t-~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
+.+.++.+.+.+++.-+-. .....+|+ ++||||+..|+..||... | +..+|......|-...-+...
T Consensus 106 ~~~~~la~~L~~~~p~~~~----~~~~v~f~~~SGSEAve~AlklAr~~t-------g-r~~ii~~~~~yHG~t~~als~ 173 (464)
T PRK06938 106 PVKDQFVQDLFASLPEAFA----REAKIQFCGPTGTDAVEAALKLVKTAT-------G-RSTVLSFQGGYHGMSQGALSL 173 (464)
T ss_pred HHHHHHHHHHHHhCccccc----ccceEEEeCCCcHHHHHHHHHHHHHhh-------C-CCeEEEECCccCCccHHHHhh
Confidence 3444444557766532110 00024454 799999999999998642 1 223344444456544444433
Q ss_pred hCC-------C--CCCeEEEeCCCCCC--C--------ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----
Q 041829 195 GGI-------H--PQNFRVLKTDSSTN--Y--------SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---- 251 (486)
Q Consensus 195 ~g~-------g--~~~v~~v~~~~~~~--~--------~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---- 251 (486)
.|- + ...+..+|...... + ..+.+.+++.+++.......+.+|++.-.....|.+-|
T Consensus 174 t~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~y 253 (464)
T PRK06938 174 MGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEW 253 (464)
T ss_pred cCCccccccCCCCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHH
Confidence 221 0 11345555432100 0 02367788877542211124567777665555677644
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccc
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFL 331 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl 331 (486)
++++.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..++.|+++.++. + ..+. +.+.
T Consensus 254 l~~lr~lc~~~giLlI~DEV~tGfGRtG~~~a~e~~gv-~PDiv~~g--KglggG~PlsAv~~~~~--~-~~~~--~~~~ 325 (464)
T PRK06938 254 LRGLRRITEEAGIPLIVDEIQSGFGRTGKMFAFEHAGI-IPDVVVLS--KAIGGSLPLAVVVYREW--L-DTWQ--PGAH 325 (464)
T ss_pred HHHHHHHHHHcCCEEEEeccccCCCcCcHHHHHHhcCC-CCCEEEee--ccccCCCceEEEeehhH--h-hccC--CCCC
Confidence 89999999999999999998876532221111111233 47998885 88876677899888753 2 2221 1100
Q ss_pred cccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEec--CCCceEEE
Q 041829 332 KNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVT--PRIFSLVC 408 (486)
Q Consensus 332 ~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~--~~~~~~v~ 408 (486)
.. |. .+.+.....+.++++.+..+ ++.++..++.++|.+.|+++. ...++. .-...++.
T Consensus 326 ~~--------------T~-~gnpla~Aaa~a~L~~l~~~---~l~~~~~~~G~~l~~~L~~l~~~~~~i~~VrG~Glm~g 387 (464)
T PRK06938 326 AG--------------TF-RGNQMAMAAGSATLRYIKEH---RLAEHAAAMGERLREHLRQLQRDYPQLGDVRGRGLMLG 387 (464)
T ss_pred CC--------------CC-CcCHHHHHHHHHHHHHHHHh---HHHHHHHHHHHHHHHHHHHHHHhCCCeeeeeccceEEE
Confidence 00 11 12222223444455555333 355666777777777776531 111111 11223445
Q ss_pred EEecCCCCC------cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHND------EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 409 f~~~~~~~~------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
+.+...... ..........+...+.++|. ++.+.... ..++|+.. ....|++||+.+++++.+++.++.+
T Consensus 388 ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl-l~~~~g~~-~~~l~~~P-pl~it~~eid~~~~~l~~~l~~~~~ 463 (464)
T PRK06938 388 VEIVDPQGEPDALGHPPANGELASLIQRECLRRGL-ILELGGRH-GSVVRFLP-PLIITAEQIDEVAEIFAEAVAAAVA 463 (464)
T ss_pred EEeccCcccccccccCCccHHHHHHHHHHHHHCCe-EEeecCCC-CCEEEEEC-CCccCHHHHHHHHHHHHHHHHHHhc
Confidence 555321100 00012345667788888884 44332111 25899987 6788999999999999999887653
No 358
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.36 E-value=1e-09 Score=103.36 Aligned_cols=340 Identities=14% Similarity=0.118 Sum_probs=201.3
Q ss_pred CccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCC
Q 041829 104 VGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQ 183 (486)
Q Consensus 104 ~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~ 183 (486)
....|+.|.+..-+.+.+.+.+.+.=|.|.+ ..++++|+|+|.|..+.|...... +++-|+++-.
T Consensus 105 s~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~-----p~dI~LT~GAS~ai~~il~l~~~~----------~~~GvliPiP 169 (475)
T KOG0258|consen 105 SLGAYSDSQGVPGVRKHVAEFIERRDGIPAD-----PEDIFLTTGASPAIRSILSLLIAG----------KKTGVLIPIP 169 (475)
T ss_pred cccccccccCChhHHHHHHHHHHhccCCCCC-----HHHeeecCCCcHHHHHHHHHHhcC----------CCCceEeecC
Confidence 5578999999999999999999999896543 247999999999877766554432 4455666666
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---CChHHHHHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---DPLLALGNIAK 260 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---d~l~~I~~ia~ 260 (486)
-++-+...+..+|. ..+..-+|+..+|.+|.+.|++.+++.. ++.+|.++|+..+-|+||.+ +.|++|..+|.
T Consensus 170 QYPLYsAti~l~~~---~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~ 245 (475)
T KOG0258|consen 170 QYPLYSATISLLGG---TQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNPTGQVLSEENIEGIICFAA 245 (475)
T ss_pred CCchhHHHHHHhCC---cccceeeccccCCCCCHHHHHHHHHHHh-ccCCceEEEEECCCCccchhhcHHHHHHHHHHHH
Confidence 66666666777888 6777778888889999999999999887 88999999999999999998 67999999999
Q ss_pred HhCCEEEeeccccchhccCc----cchhcccCC-----cCCCceeee-cccccCC--CCcceEEEE--eCchHHHHHhcC
Q 041829 261 SNGMWFHVDAAYAGSACICP----EYRQYIDGV-----EEADSFNMN-AHKWFLT--NFDCSALWV--KDRNTLIQSLST 326 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~~~~~~----~~~~~~~~~-----~~aDs~~~~-~hK~l~~--p~~~g~l~~--r~~~~~~~~~~~ 326 (486)
++|+.+..|..|--..+.-. +++..+..+ ..+..+++. .||...+ ....|.+=+ ++++.....++.
T Consensus 246 ~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~n~~prv~~qi~Kl 325 (475)
T KOG0258|consen 246 EEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESLNRDPRVKQQIKKL 325 (475)
T ss_pred HcCeEEechHHHHhhccCCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecccCChhHHHHHHHH
Confidence 99999999998754333211 111111111 123333333 3444432 122333222 222222111111
Q ss_pred CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceE
Q 041829 327 NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSL 406 (486)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~ 406 (486)
...-+....... ...+........+ -.....|..=+ ..+.+.....|+.+.+.++.++|+++. +++..+
T Consensus 326 ~si~lc~~V~GQ-~~vdl~VnPP~Pg--d~Sy~~~~~Ek-------d~il~~l~~ra~l~~~~~ns~~gi~cn-~~qGAM 394 (475)
T KOG0258|consen 326 ASIKLCPQVSGQ-KLVDLVVNPPKPG--DPSYDLFSSEK-------DGILSSLRSRAKLTEDAFNSLEGISCN-PVQGAM 394 (475)
T ss_pred HhhhhcCCccch-hhhceecCCCCCC--Ccchhhhhhhh-------HhHHHHHHHHhHHHHHHHhhcCceeec-cCccce
Confidence 111111100000 0000000000000 01122222211 345667777899999999999999875 677777
Q ss_pred EEEEec--CCC-CC-----cccchHHHHHHHHHHH-ccCcEEEEeeeE---CCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 407 VCFRLL--PPH-ND-----EDHGNKLNHKLLDDIN-STGKIFISHTVL---SGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 407 v~f~~~--~~~-~~-----~~~~~~~~~~l~~~l~-~~g~~~~~~~~~---~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
..|--. |.. .. ....|. -.+.+|. ..|+..+.++.+ .|...+|..+.-+. + ..++.+++
T Consensus 395 Y~fP~i~lP~kaie~A~~~~~~PD~---FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~-----~-~~i~~~~~ 465 (475)
T KOG0258|consen 395 YLFPQISLPPKAIEAAKALGIAPDE---FYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPG-----L-EIIEKFKK 465 (475)
T ss_pred eecccccCCHHHHHHHHHhCCCCcH---HHHHHHHHhcCeEEecCCCCCCCCceeEEEEeecCch-----h-HHHHHHHH
Confidence 776321 211 00 000111 1233344 456555555544 45678999984332 3 66666666
Q ss_pred HHHHHHHh
Q 041829 475 KASALLAR 482 (486)
Q Consensus 475 ~~~~l~~~ 482 (486)
.-+++.++
T Consensus 466 fH~~f~~~ 473 (475)
T KOG0258|consen 466 FHAEFMDE 473 (475)
T ss_pred HHHHHHHh
Confidence 66666554
No 359
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.36 E-value=1.2e-09 Score=110.32 Aligned_cols=315 Identities=10% Similarity=0.031 Sum_probs=171.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
.+...++.+.|+++++-+.+ ..+|+++||||+..|+..||...... + .+ +..+|......|-...-+...
T Consensus 85 ~~~~~~la~~L~~~~p~~~~-------~v~f~~SGsEAve~AlklAr~~~~~~-g-~~-r~kii~~~~~yHG~t~~a~s~ 154 (428)
T PRK07986 85 HPPAIELCRKLVAMTPQPLE-------CVFLADSGSVAVEVAMKMALQYWQAK-G-EP-RQRFLTLRHGYHGDTFGAMSV 154 (428)
T ss_pred CHHHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-C-CC-CcEEEEECCCcCCCcHhhhcc
Confidence 34455566668888743222 47999999999999999998742111 1 11 222344444456443333322
Q ss_pred hCCC----------CCCeEEEeCCCCC---CC-ccCHHHHHHHHHHHHhCCCccEEEEEecC-Ccccccc----CChHHH
Q 041829 195 GGIH----------PQNFRVLKTDSST---NY-SLSPDSLAEAISRDLTIGLIPFFLCATVG-TTSSTAV----DPLLAL 255 (486)
Q Consensus 195 ~g~g----------~~~v~~v~~~~~~---~~-~id~~~L~~~i~~~~~~g~~p~~vv~~~~-~t~tG~i----d~l~~I 255 (486)
.+-. ...+..+|..... .+ .-|++++++.++.. +....+|++... ....|.+ +.+++|
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~---~~~iaavi~Epi~~g~gg~~~~~~~~L~~l 231 (428)
T PRK07986 155 CDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAH---RHEIAAVILEPIVQGAGGMRIYHPEWLKRV 231 (428)
T ss_pred cCCchhhhhccCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhC---CCcEEEEEEechhcCcCCcccCCHHHHHHH
Confidence 2210 0123344432110 01 23667788877532 223445555542 3344543 338999
Q ss_pred HHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCc-ccccc
Q 041829 256 GNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNP-EFLKN 333 (486)
Q Consensus 256 ~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~-~yl~~ 333 (486)
.++|++||+++++|+++.|+.-...-+.....++ ..|.+++ -|.++.. .++|+++.++. +.+.+.... ..+..
T Consensus 232 ~~lc~~~g~lLI~DEv~tG~GrtG~~fa~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~~~ 306 (428)
T PRK07986 232 RKLCDREGILLIADEIATGFGRTGKLFACEHAGI-APDILCL--GKALTGGTMTLSATLTTRE--VAETISNGEAGCFMH 306 (428)
T ss_pred HHHHHHcCCEEEEeccccCCccCCCeeeecccCC-CCCEEEe--chhhhCCcccCcchhchHH--HHHHhhcCCCCcccc
Confidence 9999999999999999866422111111111233 3687764 5887655 35676666543 333332211 00000
Q ss_pred cccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEEEEe
Q 041829 334 KASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVCFRL 411 (486)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~f~~ 411 (486)
. .+. .+.+....++.++++.+-.+ ++.++..++.++|++.|+++.....+.+ -...++.+.+
T Consensus 307 ~------------~T~-~g~p~~~aaa~a~L~~i~~~---~~~~~~~~~g~~l~~~l~~l~~~~~i~~vRg~Gl~~~ve~ 370 (428)
T PRK07986 307 G------------PTF-MGNPLACAVANASLSLLESG---DWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAIGVVET 370 (428)
T ss_pred C------------CCC-CcCHHHHHHHHHHHHHHHhC---CHHHHHHHHHHHHHHHHHHHhcCCCEEeEeccceEEEEEe
Confidence 0 011 12222333445556655333 3467777888888888876422221211 1123444444
Q ss_pred cCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 412 LPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 412 ~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
... .....+.+.+.++|. ++.+. | .++|++. ....|++||++++++|.++.+
T Consensus 371 ~~~--------~~~~~~~~~l~~~Gl-~~~~~---g-~~i~~~P-pl~it~~ei~~~~~~l~~~l~ 422 (428)
T PRK07986 371 TRP--------VNMAALQRFFVEQGV-WIRPF---G-KLIYLMP-PYIILPEQLQRLTAAVNRAVQ 422 (428)
T ss_pred CCc--------ccHHHHHHHHHHCCc-EEEec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHHh
Confidence 321 113567788888884 44432 3 4899987 678899999999999988864
No 360
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.35 E-value=2.1e-09 Score=109.86 Aligned_cols=331 Identities=11% Similarity=0.104 Sum_probs=178.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++.+.++.+.|++++..+.+ ..+|++|||+|+..|+..||...... +..+ +..+|......|-...-+..+
T Consensus 98 ~~~~~~lae~L~~~~p~~~~-------~v~f~~SGseAve~AlklAr~~~~~~-g~tg-r~~ii~~~~~YHG~t~~als~ 168 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGLK-------KVFYSDSGATAVEIAIKMAFQYWQNK-GKPK-KQRFVTLKNAYHGDTIGAVSV 168 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCcCCcccHHhHhc
Confidence 34455566668888743212 48999999999999999999743211 1111 222344444456554444443
Q ss_pred hCCC---------CCCeEEEeCCCCC--CCc--------cCHHHHHHHHHHHHhCCCccEEEEEec-CCccccccCC---
Q 041829 195 GGIH---------PQNFRVLKTDSST--NYS--------LSPDSLAEAISRDLTIGLIPFFLCATV-GTTSSTAVDP--- 251 (486)
Q Consensus 195 ~g~g---------~~~v~~v~~~~~~--~~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~-~~t~tG~id~--- 251 (486)
.|-. ...+..+|....- .+. -+++.+++.++. .+..+.+|++.- .....|.+-|
T Consensus 169 s~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 245 (460)
T PRK06916 169 GAIDLFHQVYSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKE---KHEEIAAIIVEPLVQGAGGMITMPKG 245 (460)
T ss_pred cCCcccccccCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcccCCHH
Confidence 3311 0123444432100 001 135566666652 233456677665 3555576633
Q ss_pred -hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcc
Q 041829 252 -LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 -l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
++++.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++ -|.++..+ +.|+++.+++ +.+.+...
T Consensus 246 fl~~lr~lc~~~g~llI~DEV~TG~GRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~e--i~~~~~~~-- 318 (460)
T PRK06916 246 YLKGLRNLCTKYNVLFITDEVATGFGRTGKMFACEHENV-TPDIMTA--GKGLTGGYLPIAITVTTDE--IYNAFYGD-- 318 (460)
T ss_pred HHHHHHHHHHHcCCEEEeechhhCCCcCchhhHHHhcCC-CCCeeee--ehhhhcCccccceeeecHH--HHHHhhcc--
Confidence 89999999999999999999876432221111111233 4788876 48776553 6788888753 22222110
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLV 407 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v 407 (486)
+.... .....+...+.+.....+.++++.+..+ .++++..++.++|++.|+++....++.+ -...++
T Consensus 319 ~~~~~--------~~~~~~T~~gnpl~~aaa~a~l~~l~~~---~l~~~~~~~g~~l~~~l~~l~~~~~v~~vrG~Glm~ 387 (460)
T PRK06916 319 YEEQK--------TFFHGHSYTGNPLGCAVALANLELYEKT---NLIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMV 387 (460)
T ss_pred ccccC--------ccccCCCCCCCHHHHHHHHHHHHHHHhc---cHHHHHHHHHHHHHHHHHHhhcCCCeEEeecCCcee
Confidence 10000 0000000112222223334445444333 3567778888888888876532211111 112234
Q ss_pred EEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 408 ~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.+.+..... +. ........++...+.++| +++.+. + .++|+.. ....|++||+.++++|++.++++.+
T Consensus 388 giel~~~~~~~~~~~~~~~~~~~i~~~~~~~G-vl~~~~---g-~~l~~~P-pl~it~~~id~~~~~l~~~l~~~~~ 458 (460)
T PRK06916 388 GIELVKNKETKEPFEWTERVGVQVCKRSRELG-MLTRPL---G-NTIVFMP-PLASTIDELDEMLRILYKAISDVTE 458 (460)
T ss_pred eEEeecccccccCCCchhhHHHHHHHHHHHCC-eEEEec---C-CEEEEeC-CcccCHHHHHHHHHHHHHHHHhhcc
Confidence 444422110 00 001123356778888888 444432 2 4789987 7788999999999999999887653
No 361
>PRK07046 aminotransferase; Validated
Probab=99.35 E-value=2e-09 Score=109.59 Aligned_cols=301 Identities=17% Similarity=0.107 Sum_probs=169.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
++.|.++.+.++++++++ ...|+++||||+..|+..||... ++..|+. ....|-.......
T Consensus 114 ~~~~~~lAe~l~~~~~~~---------~v~F~nSGtEA~e~AlrlAR~~T---------Gr~~ii~~~g~YHG~~d~~l~ 175 (453)
T PRK07046 114 SEDAAWVGEELARRFGLP---------YWQVATTATDANRFVLRWARAVT---------GRPKILVFNGCYHGTVDDVFV 175 (453)
T ss_pred CHHHHHHHHHHHHHhCCC---------EEEEECCHHHHHHHHHHHHHHhh---------CCCEEEEECCCCCCCcHHhHh
Confidence 566777778898888643 37999999999999999999752 3333443 4344543221111
Q ss_pred Hh------------CCCC---CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHH
Q 041829 194 IG------------GIHP---QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLA 254 (486)
Q Consensus 194 ~~------------g~g~---~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~ 254 (486)
.. |+.. ..+..+|. -|++.|++.+.. ..+.+|++.......|.+-| +++
T Consensus 176 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-------nd~~~l~~~l~~-----~~vAavi~EPi~g~~G~~~p~~~fl~~ 243 (453)
T PRK07046 176 DLVDGRPVQRPGLLGQVHDLTATTRVVEF-------NDLAALEAALAD-----GDVAAVLAEPAMTNIGMVLPEPGFHEA 243 (453)
T ss_pred hccCCCCCCCCCCCCCCccccCceEeeCC-------CCHHHHHHHhCC-----CCeEEEEECCCCCCCCCcCCCHHHHHH
Confidence 10 1100 01222221 278999988842 23567777766666677755 899
Q ss_pred HHHHHHHhCCEEEeecccc---chhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCC-ccc
Q 041829 255 LGNIAKSNGMWFHVDAAYA---GSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTN-PEF 330 (486)
Q Consensus 255 I~~ia~~~g~~lhvD~A~g---~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~-~~y 330 (486)
+.++|++||+.+++|+.+. |.... ... -++ ..|.+++ -|.++..+++|++..+++ +...+... ...
T Consensus 244 lr~lc~~~g~llI~DEV~tfr~g~Gg~----~~~-~gv-~PDi~t~--gK~lggG~Pi~av~g~~~--i~~~~~~~~~~~ 313 (453)
T PRK07046 244 LRELTRRYGTLLVIDETHTISSGPGGY----TRA-HGL-EPDFLVV--GKPIAGGVPCAVYGFSAE--LAERAQAAKASA 313 (453)
T ss_pred HHHHHHHhCCEEEEEccccCccCCcch----hHH-hCC-Cccceee--hhhhcCCCcceeeeehHH--HHHHHhhccccC
Confidence 9999999999999999874 21111 111 133 4788876 588877788998887754 22233210 000
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcH---HHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCC-eEEecCC
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSL---KLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLR-FEVVTPR 402 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l---~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~-~~~~~~~ 402 (486)
.. .......+-....+ +..++++.+-.+ +..++..++.++|++.|++ .+- +.+....
T Consensus 314 ~~------------~~~~~~~T~~gnpl~~aa~~a~L~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~~~~~v~g~G 378 (453)
T PRK07046 314 PP------------GHSGIGTTLSANALAMAAMRATLAEVMTE---AAYAHMLALAARLAAGLRAVIARHGLPWHVTRVG 378 (453)
T ss_pred CC------------CCceeCCCCcccHHHHHHHHHHHHHHhcc---cHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence 00 00000111112223 334445544222 3455666667777666653 321 1222222
Q ss_pred CceEEEEEecCCCC-Cc----cc-chHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 403 IFSLVCFRLLPPHN-DE----DH-GNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 403 ~~~~v~f~~~~~~~-~~----~~-~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
.++.+.+..... +. .. .......+...+.++|. ++.+. + ..++++. .+|++|||++++++.+++
T Consensus 379 --~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv-~~~~~---~-~~~~~~p---~~t~~did~~~~~~~~~l 448 (453)
T PRK07046 379 --ARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRGV-LITPF---H-NMMLVCP---ATTAADVDRLVAAFDACL 448 (453)
T ss_pred --cEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCCC-EEecc---c-CcEEEeC---CCCHHHHHHHHHHHHHHH
Confidence 234444422110 00 00 12345667778888884 44431 1 3566665 479999999999999998
Q ss_pred HHHH
Q 041829 477 SALL 480 (486)
Q Consensus 477 ~~l~ 480 (486)
+++.
T Consensus 449 ~~~~ 452 (453)
T PRK07046 449 GELL 452 (453)
T ss_pred HHHh
Confidence 7764
No 362
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.35 E-value=5.6e-09 Score=106.77 Aligned_cols=331 Identities=13% Similarity=0.079 Sum_probs=174.9
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG 195 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~ 195 (486)
+...++.+.|++++.-... ..+....+|+++||+||..|+..||...... +..+ +..+|......|-...-+....
T Consensus 107 ~~~~~lae~L~~~~p~~~~--~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~-g~~~-r~~ii~~~~syHG~t~gals~~ 182 (472)
T PRK08742 107 EPAVQLAEQLLAIAPRQDG--RAPLSKVFYADNGSAGVEVALKMAFHYFHNR-GEHR-RTRFIALENGYHGETIGALAVG 182 (472)
T ss_pred HHHHHHHHHHHHhCCCccc--CCCCCEEEEeCCchHHHHHHHHHHHHHHHhc-CCCC-CcEEEEECCCcCCCchhhhhcc
Confidence 3445566668887742100 0000147999999999999999999764221 1111 2234444555565444333332
Q ss_pred CCCC---------CCeEEEeCCCCC--CCc--------cCHHHHHHHHHHHHhCCCccEEEEEec-CCccccccCC----
Q 041829 196 GIHP---------QNFRVLKTDSST--NYS--------LSPDSLAEAISRDLTIGLIPFFLCATV-GTTSSTAVDP---- 251 (486)
Q Consensus 196 g~g~---------~~v~~v~~~~~~--~~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~-~~t~tG~id~---- 251 (486)
|... ..+..+|..... .+. -+++.+++.++. .+..+.+|++.- .....|.+-|
T Consensus 183 ~~~~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~iAAvI~EPviqg~gG~~~~p~~f 259 (472)
T PRK08742 183 DIPLYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQ---SPGEICALILEPRLQCAGGMRMHHPAY 259 (472)
T ss_pred CCcccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEccccccCCCcccCCHHH
Confidence 2210 123444432110 001 135666666642 223456666654 2445566533
Q ss_pred hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc--
Q 041829 252 LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP-- 328 (486)
Q Consensus 252 l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~-- 328 (486)
++++.++|++||+.+++|+.+.|+.....-+.....++ ..|.+++. |.++..+ +.|.++.+++ +.+.+....
T Consensus 260 l~~lr~lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv-~PDiv~~g--Kgl~gG~~Plaav~~~~e--i~~~~~~~~~~ 334 (472)
T PRK08742 260 LRRARELCDAHGAFLIADEIATGFGRTGTLFACEQAGV-MPDLLCLS--KGLTGGFLPLSAVLATQQ--LYDAFLDDSRE 334 (472)
T ss_pred HHHHHHHHHHcCCEEEEechhhCCCCCccchHHHhcCC-CCCEEEEc--ccccCCCCCcceeeccHH--HHHHhhccCcc
Confidence 89999999999999999998876543221111111234 47998874 8886554 6788877653 222332110
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceE
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSL 406 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~ 406 (486)
..+.. .+.-.+.+....+..++++.+-.+. ++++..++.++|.+.++......++.+ -...+
T Consensus 335 ~~~~h-------------~~T~~gnpl~~Aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~~~~~~~~~~i~dvRG~Gl~ 398 (472)
T PRK08742 335 RAFLH-------------SHSYTGNPLACAAALATLDIFADDD---VIARNQPTAARMTQLAAQIGEHPHVADVRQAGMV 398 (472)
T ss_pred CccCc-------------CCCCCccHHHHHHHHHHHHHHHHCC---HHHHHHHHHHHHHHHHHHHhcCCCeeeEeccceE
Confidence 00000 0001122222234444555554443 345555666666655544322222211 12234
Q ss_pred EEEEecCCCCC--c-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 407 VCFRLLPPHND--E-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 407 v~f~~~~~~~~--~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+.+.+...... . ........++.+++.++|. ++.+. | .++|+.. ....|++||+++++.|.++++++.
T Consensus 399 ~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gl-l~~~~---g-~vi~~~P-pL~it~~ei~~~~~~l~~~l~~~~ 469 (472)
T PRK08742 399 VAFELTRGGNKRTPFPPAARVGLHAYRAALARGV-VLRPL---G-DVLYWMP-PYCVDEAQLALLADTTRHAIDEAV 469 (472)
T ss_pred EEEEeccCccccccCCchhHHHHHHHHHHHHCCe-EEEec---C-CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHh
Confidence 44544321100 0 0011233567778888884 44332 3 4899988 778899999999999999988764
No 363
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.34 E-value=9.9e-09 Score=104.96 Aligned_cols=330 Identities=12% Similarity=0.079 Sum_probs=180.4
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQI 194 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~ 194 (486)
++...++.+.|++++.-+.+ ..+|+++||+|+..|+..||.....+ +..+ +..+|......|-...-+..+
T Consensus 89 ~~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlKlAr~~~~~~-g~t~-r~~ii~~~~~yHG~t~ga~s~ 159 (466)
T PRK07030 89 HEPVIELSERLVKITPPGLS-------RCFYADNGSSAIEVALKMSFHYWRNR-GKPR-KKRFVTLTNSYHGETLAAMSV 159 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHHh-CCCC-CcEEEEECCCcCcccHHHHhc
Confidence 44555666668887742211 48999999999999999998753211 1111 222344455556554444433
Q ss_pred hCCCC---------CCeEEEeCCCCC--CCc--------cCHHHHHHHHHHHHhCCCccEEEEEec-CCccccccCC---
Q 041829 195 GGIHP---------QNFRVLKTDSST--NYS--------LSPDSLAEAISRDLTIGLIPFFLCATV-GTTSSTAVDP--- 251 (486)
Q Consensus 195 ~g~g~---------~~v~~v~~~~~~--~~~--------id~~~L~~~i~~~~~~g~~p~~vv~~~-~~t~tG~id~--- 251 (486)
.|... ..+..+|....- .+. -+++.+++.+.+ .+..+.+|++.- .....|.+-|
T Consensus 160 ~~~~~~~~~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~---~~~~iAAvi~EP~iqg~gG~~~~~~~ 236 (466)
T PRK07030 160 GDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAE---HHDEIAAVIVEPLIQGAGGMRMYHPV 236 (466)
T ss_pred cCCccccccCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHh---CCCceEEEEEecccccCCCcccCCHH
Confidence 33210 123344432100 001 134566776652 233456666665 3455576644
Q ss_pred -hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCcc
Q 041829 252 -LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNPE 329 (486)
Q Consensus 252 -l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~~ 329 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..+ +.|.++.+++ +.+.+....+
T Consensus 237 yl~~lr~lc~~~g~llI~DEV~TGfGRtG~~~a~~~~gv-~PDiv~~g--Kgl~gG~~Pi~av~~~~e--i~~~~~~~~~ 311 (466)
T PRK07030 237 YLKLLREACDRYGVHLIHDEIAVGFGRTGTMFACEQAGI-RPDFLCLS--KALTGGYLPLAAVLTTDT--VYQAFYDDYP 311 (466)
T ss_pred HHHHHHHHHHHcCCEEEEeehhhCcCccccchHHHhcCC-CCCEEeee--hhccCCcccceEEEecHH--HHHHHhcccc
Confidence 89999999999999999998876533221111111234 47998884 8887664 6888888754 2223321100
Q ss_pred cccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEec--CCCceEE
Q 041829 330 FLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVT--PRIFSLV 407 (486)
Q Consensus 330 yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~--~~~~~~v 407 (486)
-. + .+...+.-.+.+....++.++++.+-.+ +++++..++.++|.+.|+++.....+. .-...++
T Consensus 312 ~~--------~--~~~h~~T~~gnpla~aaa~a~L~~i~~~---~l~~~~~~~G~~l~~~L~~l~~~~~v~~vrG~Gl~~ 378 (466)
T PRK07030 312 TL--------R--AFLHSHSYTGNPLACAAALATLDIFEQD---NVIENNRALARRMAEATAHLADHPHVAEVRQTGMIL 378 (466)
T ss_pred cc--------c--ccccCCCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHhcCCCEEEeEeceeEE
Confidence 00 0 0000000112222233444455555333 356777788888888887642221111 1122344
Q ss_pred EEEecCCCC--Cc-ccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 408 CFRLLPPHN--DE-DHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 408 ~f~~~~~~~--~~-~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
.+.+..... .. ........++.+++.++| +++.+. + ..+|+.. ....|++||+.+++.+.+.++++.
T Consensus 379 gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~G-vl~~~~---g-~~i~~~P-pl~it~~eid~~~~~l~~al~~~~ 448 (466)
T PRK07030 379 AIEMVQDKASKTPYPWQERRGLKVYQHALERG-ALLRPL---G-SVVYFLP-PYVITPEQIDFLAEVASEGIDIAT 448 (466)
T ss_pred EEEeccCccccccCcchhHHHHHHHHHHHHCC-eEEEec---C-CEEEEEC-CccCCHHHHHHHHHHHHHHHHHHh
Confidence 555432110 00 001122356778888888 444432 2 3799987 778899999999999999998874
No 364
>PRK07483 hypothetical protein; Provisional
Probab=99.34 E-value=6.8e-09 Score=105.62 Aligned_cols=329 Identities=17% Similarity=0.151 Sum_probs=175.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHHH
Q 041829 116 ELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQI 194 (486)
Q Consensus 116 ~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~~ 194 (486)
+...++.+.|++++.-+.+ ..+|++|||+|+..|+..||..... .+.. .+..|+. ....|-...-+..+
T Consensus 73 ~~~~~lae~L~~~~p~~~~-------~v~f~~sGsEAve~AlklAr~~~~~-~g~~--~r~~Ii~~~~~YHG~t~~a~s~ 142 (443)
T PRK07483 73 EPAEALADRLVAAAPAGLE-------HVYFVSGGSEAVEAALKLARQYFVE-IGQP--QRRHFIARRQSYHGNTLGALAI 142 (443)
T ss_pred HHHHHHHHHHHHhCCCCCC-------EEEEcCCcHHHHHHHHHHHHHHHHh-cCCC--CCcEEEEECCCcCCcCHHHhhh
Confidence 3445555668887642111 4799999999999999999875321 1111 2333443 44456544333332
Q ss_pred hCC---------CCCCeEEEeCCCCCCCcc-------------CHHHHHHHHHHHHhCCCccEEEEEecCCc-cccccCC
Q 041829 195 GGI---------HPQNFRVLKTDSSTNYSL-------------SPDSLAEAISRDLTIGLIPFFLCATVGTT-SSTAVDP 251 (486)
Q Consensus 195 ~g~---------g~~~v~~v~~~~~~~~~i-------------d~~~L~~~i~~~~~~g~~p~~vv~~~~~t-~tG~id~ 251 (486)
.|- +...+..+|... .|+- .++.|++++... ....+.+|++..... ..|.+.|
T Consensus 143 s~~~~~~~~~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~iAAvivEPiqg~~gG~~~~ 218 (443)
T PRK07483 143 GGNAWRREPFAPLLIEAHHVSPCY--AYREQRAGESDEAYGQRLADELEAKILEL--GPDTVAAFVAETVVGATAGAVPP 218 (443)
T ss_pred cCCcccccccCCCCCCCEEeCCCc--cccccccCCCHHHHHHHHHHHHHHHHHhc--CCCceEEEEEeCcccCcCCeEeC
Confidence 221 111233343221 0111 124566555421 122345566654432 2466654
Q ss_pred ----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCC-cceEEEEeCchHHHHHhcC
Q 041829 252 ----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLST 326 (486)
Q Consensus 252 ----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~ 326 (486)
+++|.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++ -|.++..+ +.|+++.+++ +.+.+..
T Consensus 219 ~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l~gG~~Pi~av~~~~~--i~~~~~~ 293 (443)
T PRK07483 219 VPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGV-APDLVTI--AKGLGAGYQPIGAVLASDR--IYDAIAD 293 (443)
T ss_pred CHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCC-CCCeeee--hhhhccCccccEEEEEcHH--HHHHHhc
Confidence 89999999999999999999877533221111111133 4788887 48887664 6888888764 2223321
Q ss_pred CcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-CCeEEecC--CC
Q 041829 327 NPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD-LRFEVVTP--RI 403 (486)
Q Consensus 327 ~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~-~~~~~~~~--~~ 403 (486)
...++... +...+.+.......++++.+-.+ .+.++..++.++|++.|+++ ....++.+ -.
T Consensus 294 ~~~~~~h~-------------~T~~gnpl~~aaa~a~l~~i~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~i~~vRG~ 357 (443)
T PRK07483 294 GSGFFQHG-------------HTYLGHATACAAALAVQRVIAED---GLLANVRARGEQLRARLRERLGQHPHVGDIRGR 357 (443)
T ss_pred CCCccccC-------------CCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHhcCCCeeeEeec
Confidence 11111100 00112222223344445444333 35566777777777777642 12211111 12
Q ss_pred ceEEEEEecCCC--CCc-ccchHHHHHHHHHHHccCcEEEEeee--ECC--EeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 404 FSLVCFRLLPPH--NDE-DHGNKLNHKLLDDINSTGKIFISHTV--LSG--KYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 404 ~~~v~f~~~~~~--~~~-~~~~~~~~~l~~~l~~~g~~~~~~~~--~~~--~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
..++.+.+.... ... .........+...+.++|.+. .+.. ..+ ..++|+.. ....|++|||+++++|++++
T Consensus 358 Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~-~~~~~~~~~~~~~~l~~~P-pL~it~~eid~~~~~l~~~l 435 (443)
T PRK07483 358 GLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMV-YPMGGTIDGVRGDHVLLAP-PFIITAAQIDEIVERLGDAI 435 (443)
T ss_pred ccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEE-EecCccccCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHH
Confidence 224444442211 000 001234467788888899543 3221 111 24899988 77889999999999999999
Q ss_pred HHHHH
Q 041829 477 SALLA 481 (486)
Q Consensus 477 ~~l~~ 481 (486)
.++.+
T Consensus 436 ~~~~~ 440 (443)
T PRK07483 436 DAALA 440 (443)
T ss_pred HHHHh
Confidence 87664
No 365
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.34 E-value=3.8e-09 Score=107.46 Aligned_cols=314 Identities=11% Similarity=0.065 Sum_probs=164.6
Q ss_pred HHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCC---CCe-EEEecCCCchhHHHHHHHh
Q 041829 120 IVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSL---EKL-VVYASDQTHSALQKACQIG 195 (486)
Q Consensus 120 ~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~---~~~-~v~~s~~~H~s~~~a~~~~ 195 (486)
+..+.++++.+ +... ...+|++|||||+..|+..||..........|. ++. +|-.....|-...-+....
T Consensus 96 ~la~~l~~~~~-p~~~-----~~v~f~~SGsEAve~AlKlAr~~~~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~ 169 (443)
T PRK08297 96 RFVDTFARVLG-DPEL-----PHLFFVDGGALAVENALKVAFDWKSRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLT 169 (443)
T ss_pred HHHHHHHhhcC-CCCC-----CEEEEeCchHHHHHHHHHHHHHHhhccccccCCCCCCCceEEEECCCcCCcchhhhhhc
Confidence 34444677663 2110 248999999999999999998753211000111 123 3444444565544444433
Q ss_pred CCCCC-----C---eEEEeCCC------CCC---C-c---cCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc----C
Q 041829 196 GIHPQ-----N---FRVLKTDS------STN---Y-S---LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV----D 250 (486)
Q Consensus 196 g~g~~-----~---v~~v~~~~------~~~---~-~---id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i----d 250 (486)
|.... . ...+|... ..+ . . -+++++++.+.+ .+..+.+|++.-.....|.+ +
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~---~~~~iAavI~EPi~g~~G~~~pp~~ 246 (443)
T PRK08297 170 NTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQARAAFER---HPHDIACFIAEPIQGEGGDNHFRPE 246 (443)
T ss_pred CCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEccccCCCCCcCCCHH
Confidence 31000 0 00111110 000 0 0 023445555543 23457778887766667776 4
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCccc
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEF 330 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~y 330 (486)
-+++|.++|++||+++++|+.+.|+.....-+.....++ ..|.+++ -|.+ | .|.++++++ +..... ..
T Consensus 247 yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv-~PDiv~~--gK~l--~--~~a~l~~~~--i~~~~~---~~ 314 (443)
T PRK08297 247 FFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGV-RPDIVAF--GKKT--Q--VCGIMAGRR--VDEVED---NV 314 (443)
T ss_pred HHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCC-CCCEEEe--cccc--c--ccceecchH--HHHhhh---hh
Confidence 589999999999999999999876532111111111123 5788876 4775 3 344444432 111110 00
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSL 406 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~ 406 (486)
+.... ...+.-.+.+.......++++.+..+ +++++..++.++|.+.|++ .|.+-.-......+
T Consensus 315 ~~~~~---------~~~~T~~gnpl~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~~~L~~l~~~~~~~~~~vrg~G~~ 382 (443)
T PRK08297 315 FAVSS---------RINSTWGGNLVDMVRARRILEVIEED---GLVENAARQGEYLLARLEELAAEFPAVVSNVRGRGLM 382 (443)
T ss_pred ccCcc---------ccCCCCCccHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHHHHHCCCcceeeeccceE
Confidence 00000 00000112122222334445544333 4556667777777777765 34331011223456
Q ss_pred EEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHH
Q 041829 407 VCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASAL 479 (486)
Q Consensus 407 v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l 479 (486)
+.+.+.. ......+...+.++|. ++.+. +...+|++. ...+|++|||+++++|.++++++
T Consensus 383 ~~i~~~~--------~~~~~~~~~~l~~~Gv-l~~~~---~~~~lr~~P-~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 383 CAFDLPT--------TADRDEVIRRLWEEGV-LVLPC---GERSIRFRP-ALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred EEEEecC--------HHHHHHHHHHHHHCCE-EEecC---CCCeEEEEC-CccCCHHHHHHHHHHHHHHHHhh
Confidence 6666642 2344678888888884 44332 234799987 77889999999999999988754
No 366
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.33 E-value=1.2e-09 Score=99.53 Aligned_cols=329 Identities=11% Similarity=0.121 Sum_probs=180.4
Q ss_pred HHHHHHHh-cCcCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCcc
Q 041829 93 LGEMLSAG-LNIVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKN 171 (486)
Q Consensus 93 ~~~~l~~~-~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~ 171 (486)
.+|++++. +......|+...+-..+-+.+...+.+.+|++-+. .++.+|+|+..+.+++... +......
T Consensus 54 ~aemla~~~~~e~~cnY~~pQG~~~li~ala~~l~~~ygwnit~-----~NIalTnGSQs~fFYlfNl-----F~G~~sd 123 (417)
T COG3977 54 LAEMLASGKATEALCNYDGPQGKAVLIDALAKMLRREYGWNITA-----QNIALTNGSQSAFFYLFNL-----FAGRRSD 123 (417)
T ss_pred HHHHHhcchHHHHHhcCCCCcchhHHHHHHHHHHHHHhCCCCcc-----ceeeecCCccchHHHHHHH-----hcCccCC
Confidence 34444443 23334567777778889999999999999997652 3688888766666654422 1111112
Q ss_pred CCCCeEEEec-CCCchhHHHHHHHhCCCCCCeEEEe------CCCCC--CCccCHHHHHHHHHHHHhCCCccEEEEEecC
Q 041829 172 SLEKLVVYAS-DQTHSALQKACQIGGIHPQNFRVLK------TDSST--NYSLSPDSLAEAISRDLTIGLIPFFLCATVG 242 (486)
Q Consensus 172 ~~~~~~v~~s-~~~H~s~~~a~~~~g~g~~~v~~v~------~~~~~--~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~ 242 (486)
|..+. |+.+ ...+-.+ .++|.+.=..|. ..+.+ .|++|.++|+-- +.+ -+|+++-+
T Consensus 124 G~~k~-illPLaPeYiGY------~d~~l~~d~fVs~kP~iel~~~g~FKY~vDF~~l~i~--e~~------g~ic~SRP 188 (417)
T COG3977 124 GTEKK-ILLPLAPEYIGY------ADAGLEEDLFVSAKPNIELLPAGQFKYHVDFEHLHIG--EST------GAICVSRP 188 (417)
T ss_pred Cccee-EeeccChhhccc------cccccCccceeeccCCcccccccceeeccCHHHcccc--ccc------ceEEecCC
Confidence 22232 3333 2222111 122221111222 22222 378899888642 332 47999999
Q ss_pred Ccccccc---CChHHHHHHHHHhCCEEEeeccccchhcc--CccchhcccCCcCCCceeeecccccCCCCcceEEEEeCc
Q 041829 243 TTSSTAV---DPLLALGNIAKSNGMWFHVDAAYAGSACI--CPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDR 317 (486)
Q Consensus 243 ~t~tG~i---d~l~~I~~ia~~~g~~lhvD~A~g~~~~~--~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~ 317 (486)
+|+||.+ +.+.+|.++|++||+.+++|.|||..+-. ..+.... ...--..|++..|.+....-||+++...
T Consensus 189 tNPTGNVlTdeE~~kldalA~~~giPliIDnAYg~PFP~iifsd~~~~---w~~NiilC~SLSK~GLPG~R~GIiIane- 264 (417)
T COG3977 189 TNPTGNVLTDEELAKLDALARQHGIPLIIDNAYGVPFPGIIFSDATPL---WNENIILCMSLSKLGLPGSRCGIIIANE- 264 (417)
T ss_pred CCCCCCcccHHHHHHHHHHhhhcCCcEEEecccCCCCCceeccccccc---CCCCEEEEeehhhcCCCCcceeEEEccH-
Confidence 9999999 56889999999999999999999864311 1111111 1122366889999877666688776544
Q ss_pred hHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHH----HHHhChhhHHHHHHHHHHHHHHHHHHHhc-
Q 041829 318 NTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMV----LRLYGLENLQGYIRNHIQLAKHFEGLVAQ- 392 (486)
Q Consensus 318 ~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~----l~~~g~~g~~~~~~~~~~~a~~l~~~l~~- 392 (486)
+.+ +++..-..-+ ++..||-..+++.-+. |..+..+-++-.. .+.++.....|++
T Consensus 265 ~vi-qaitnmn~ii----------------sLap~~~G~Aia~~mie~gdl~rlseqVIrPFY---~~~~q~~~~~l~~~ 324 (417)
T COG3977 265 KVI-QAITNMNGII----------------SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFY---RNRVQTTIAILRRY 324 (417)
T ss_pred HHH-HHHHhcccee----------------eecCCCccHHHHHHHhhcchHHHHHHHhhhHHH---HHHHHHHHHHHHHh
Confidence 333 3332211111 1122222222221110 1111112222111 2223333333322
Q ss_pred CCCeEE-ecCCCceEEEE-EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeE---------CCEeEEEEEecCCCCC
Q 041829 393 DLRFEV-VTPRIFSLVCF-RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVL---------SGKYILRFAVGAPLTE 461 (486)
Q Consensus 393 ~~~~~~-~~~~~~~~v~f-~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~---------~~~~~lRi~~~~~~~t 461 (486)
+|.... +..|+..++.+ ++..- .-....|.++|..+|.+++.+..+ +.+.|+|++. .-+
T Consensus 325 lp~~~~~iHkpEGAIFlWLWf~dL-------PItt~~LYq~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~---~~~ 394 (417)
T COG3977 325 LPEYRCLIHKPEGAIFLWLWFKDL-------PITTEELYQRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNY---VPE 394 (417)
T ss_pred cCccceeeecCCcceeehhhhccC-------CCCHHHHHHHHHhCeEEEecccccCCCCCCCCCCccceEEEec---CCC
Confidence 333332 34677666654 44321 122367899999999877776533 2346999987 337
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 041829 462 WRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 462 ~~di~~~~~~l~~~~~~l~ 480 (486)
++.|+.-++.|.+..+++-
T Consensus 395 ~~~ie~Gva~lae~ve~~y 413 (417)
T COG3977 395 PEKIEKGVAILAEEVERAY 413 (417)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 8889999998887776654
No 367
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.32 E-value=1e-08 Score=104.65 Aligned_cols=322 Identities=13% Similarity=0.082 Sum_probs=176.3
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
++.+.++.+.|++++...... ....++++|||||+..|+..||... ++..|+. ....|-...-+..
T Consensus 100 ~~~~~~lAe~L~~~~p~~~~~----~~~~f~~~SGsEAve~AlklAr~~t---------gr~~Ii~~~~~yHG~t~~als 166 (459)
T PRK06931 100 TPLKDAFSEYLLSLLPGQGKE----YCLQFTGPSGADAVEAAIKLAKTYT---------GRSNVISFSGGYHGMTHGALA 166 (459)
T ss_pred CHHHHHHHHHHHHhCCCcccc----ceEEEeCCCcHHHHHHHHHHHHHhc---------CCCeEEEECCCcCCccHHHHh
Confidence 455566667788887432100 0013556899999999999998752 3333443 4444544443433
Q ss_pred HhCCC---------CCCeEEEeCCCCCCCc--------cCHHHHHHHHHHHHh----CCCccEEEEEecCCccccccCC-
Q 041829 194 IGGIH---------PQNFRVLKTDSSTNYS--------LSPDSLAEAISRDLT----IGLIPFFLCATVGTTSSTAVDP- 251 (486)
Q Consensus 194 ~~g~g---------~~~v~~v~~~~~~~~~--------id~~~L~~~i~~~~~----~g~~p~~vv~~~~~t~tG~id~- 251 (486)
..|-. ...+..+|... .++ -+.+.+++.+++... ....+.+|++.-.....|.+-|
T Consensus 167 ~t~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~ 244 (459)
T PRK06931 167 VTGNLSPKNAVNGLMPGVQFMPYPH--EYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAP 244 (459)
T ss_pred hcCCcccccCCCCCCCCcEEeCCCc--cccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCC
Confidence 32210 11344455431 111 134555444443322 2234566777665556676643
Q ss_pred ---hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCc
Q 041829 252 ---LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNP 328 (486)
Q Consensus 252 ---l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~ 328 (486)
++++.++|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.++..++.|++..++. + +.+. +
T Consensus 245 ~~yl~~lr~lc~~~g~LlI~DEV~tGfGRtG~~~a~~~~gv-~PDivt~g--K~l~gG~Pi~av~~~~~--~-~~~~--~ 316 (459)
T PRK06931 245 VEWLQKIREVTQKHGILLIVDEVQAGFARTGKMFAFEHAGI-EPDIIVMS--KAVGGGLPLAVLGIKKE--F-DAWQ--P 316 (459)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhcCCcCchHHHhhhcCC-CCCEEEec--ccccCCcceeeeeeHHH--H-hhcc--C
Confidence 89999999999999999999876532221111111233 47888874 88876677888776642 2 2221 1
Q ss_pred ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCc
Q 041829 329 EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIF 404 (486)
Q Consensus 329 ~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~ 404 (486)
.... .|. .+.+.....+.++++.+..++ ..++..++.++|.+.|++ +|-+.-+ .-..
T Consensus 317 ~~~~--------------~T~-~gnpla~aaala~L~~l~~~~---l~~~~~~~G~~l~~~L~~l~~~~~~i~~v-rG~G 377 (459)
T PRK06931 317 GGHT--------------GTF-RGNQLAMATGLTTLKILKEEN---LAQNAAERGEWLKAQLAELQKRYPCIGNV-RGRG 377 (459)
T ss_pred CCCC--------------CCC-CCCHHHHHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHHHHHHHhCCCeEeE-ecCc
Confidence 0000 011 122222334445555554433 445666667777766654 3321111 1122
Q ss_pred eEEEEEecCCCCC------cccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 405 SLVCFRLLPPHND------EDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 405 ~~v~f~~~~~~~~------~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.++.+.+...... .........++...+.++|. ++.+.... ..++|+.. ....|++|||.+++++.+++.+
T Consensus 378 lm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gv-l~~~~~~~-~~~l~~~P-pl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 378 LMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGL-LLERGGRN-GNVVRLLP-PLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred eEEEEEEccCcccccccccCCccHHHHHHHHHHHHHCCc-EEeecCCC-CCEEEEEC-CCCcCHHHHHHHHHHHHHHHHH
Confidence 3455555321100 00012344667778888884 44332211 25799988 7888999999999999999887
Q ss_pred HHH
Q 041829 479 LLA 481 (486)
Q Consensus 479 l~~ 481 (486)
+.+
T Consensus 455 ~~~ 457 (459)
T PRK06931 455 AVK 457 (459)
T ss_pred HHh
Confidence 654
No 368
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.32 E-value=2.7e-09 Score=108.30 Aligned_cols=313 Identities=13% Similarity=0.095 Sum_probs=168.6
Q ss_pred hhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHH-hC-----------------ccCC
Q 041829 112 PAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKR-VG-----------------KNSL 173 (486)
Q Consensus 112 ~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~-~~-----------------~~~~ 173 (486)
+...++.+.+.+.+++++.-+.+ ..+|++||||||..|+..||...... .+ ..|.
T Consensus 101 ~~~~~la~~l~~~l~~~~p~~~~-------~v~f~~SGsEAvE~AlKlAr~~~~~~~r~~~~~~t~~~~~~~~~~~~~g~ 173 (464)
T TIGR00699 101 FPSKDWAKILKEGILKVAPKGQD-------QVWTGMSGSDANELAFKAAFMYYRSKQRGYQADFSEEENESCMDNQAPGS 173 (464)
T ss_pred HHHHHHHHHHHHhHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhcCCCcccccccccccccccccccCC
Confidence 33444555544444555531111 47999999999999999998753211 00 0111
Q ss_pred CC-eEEEecCCCchhHHHHHHHhCCCC--------CCeEEEeCCCCC-CC-----------ccCHHHHHHHHHHHHhCCC
Q 041829 174 EK-LVVYASDQTHSALQKACQIGGIHP--------QNFRVLKTDSST-NY-----------SLSPDSLAEAISRDLTIGL 232 (486)
Q Consensus 174 ~~-~~v~~s~~~H~s~~~a~~~~g~g~--------~~v~~v~~~~~~-~~-----------~id~~~L~~~i~~~~~~g~ 232 (486)
++ .+|-.....|-...-+....|-.. ..+..+|..... .+ .-+++.|++++++ .+.
T Consensus 174 ~r~~ii~~~~syHG~t~~als~t~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~l~~l~~~l~~---~~~ 250 (464)
T TIGR00699 174 PDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKK---WHK 250 (464)
T ss_pred cCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCceecCCCCcccccccccccchhHHHHHHHHHHHHHHh---cCC
Confidence 12 344445555655555544433210 112223322100 00 0135566777653 223
Q ss_pred ccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc-CCCceeeecccccCCCC
Q 041829 233 IPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE-EADSFNMNAHKWFLTNF 307 (486)
Q Consensus 233 ~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~-~aDs~~~~~hK~l~~p~ 307 (486)
.+.+|++.......|.+-| +++|.++|++||+.+++|+.+.|+.....-+.....++. ..|.+++ -|.++.
T Consensus 251 ~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi~t~--gK~lg~-- 326 (464)
T TIGR00699 251 PVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTF--SKKFQT-- 326 (464)
T ss_pred cEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCEEEe--hhhhcc--
Confidence 4667777777777788887 999999999999999999998765321111111112342 4888776 477631
Q ss_pred cceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHH
Q 041829 308 DCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFE 387 (486)
Q Consensus 308 ~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~ 387 (486)
.|+++ ... . +.....+. ..+.-.+.+.....+.++++.+-.+ ++.++..++.++|.
T Consensus 327 -gG~~~-~~~-~----~~~~~~~~--------------~~~T~~gnp~~~aaa~a~L~~l~~~---~l~~~~~~~g~~l~ 382 (464)
T TIGR00699 327 -AGYFF-HDP-A----FRPNKPYR--------------QFNTWMGDPSRALILREIIQEIKRK---DLLENVAHVGDYLY 382 (464)
T ss_pred -CCccc-cch-h----ccCCCCcc--------------cccCCCCCHHHHHHHHHHHHHHHhc---CHHHHHHHHHHHHH
Confidence 23322 211 1 11000000 0000111112222333455555333 34455666667777
Q ss_pred HHHhc----CCC-eEEec-CCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCC
Q 041829 388 GLVAQ----DLR-FEVVT-PRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTE 461 (486)
Q Consensus 388 ~~l~~----~~~-~~~~~-~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t 461 (486)
+.|++ +|. +.-+. .....++.+.+.. .....++.+.+.++|. ++... +..++|+.. ....|
T Consensus 383 ~~L~~l~~~~~~~i~~vRg~G~Glm~gie~~~--------~~~~~~i~~~~~~~Gv-l~~~~---g~~~ir~~P-pl~it 449 (464)
T TIGR00699 383 TGLEDLQKKYPEFIQNLRGKGRGTFIAWDTPD--------EAKRDKLLKKARNNGV-NIGGC---GVKAIRLRP-MLVFQ 449 (464)
T ss_pred HHHHHHHHhCCCceeeecccCeEEEEEEecCC--------HHHHHHHHHHHHHCCc-EEecC---CCCeEEEeC-CCCCC
Confidence 77655 432 22221 1344566666531 2335678888888884 44332 446899998 78899
Q ss_pred HHHHHHHHHHHHHH
Q 041829 462 WRHVNAAWEVMQDK 475 (486)
Q Consensus 462 ~~di~~~~~~l~~~ 475 (486)
++||+.++++|.++
T Consensus 450 ~~eid~~~~~l~~~ 463 (464)
T TIGR00699 450 KHHADIFLEIISKI 463 (464)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999875
No 369
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.30 E-value=2.6e-09 Score=108.53 Aligned_cols=303 Identities=13% Similarity=0.044 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEec-CCCchhHHHHH-
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYAS-DQTHSALQKAC- 192 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s-~~~H~s~~~a~- 192 (486)
...+.++.+.|++++.... ..+|+++||+|+..|+..||... ++..|+.. ...+.+.....
T Consensus 87 ~~~~~~la~~l~~~~p~~~--------~v~f~~sGseA~e~AlklAr~~t---------gr~~i~~~~~~~~h~~~~~~~ 149 (431)
T PRK06209 87 SAIELDAAESFLELIDGAD--------MVKFCKNGSDATSAAVRLARAYT---------GRDLVARCADHPFFSTDDWFI 149 (431)
T ss_pred CHHHHHHHHHHHHhCCccc--------eEEEecCHHHHHHHHHHHHHHHh---------CCCeEEEeccCcccccccccc
Confidence 3345556667888874212 37999999999999999998752 23334332 12211111100
Q ss_pred --HH--hCCCCCCe-EEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 193 --QI--GGIHPQNF-RVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 193 --~~--~g~g~~~v-~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
.. .|.....+ ..+.+. .-|+++|++++++. ...+.+|++.......+..+.+++|.++|++||+.++
T Consensus 150 g~~~~~~~~~~~~~~~~~~~~-----~~d~~~l~~~l~~~---~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI 221 (431)
T PRK06209 150 GTTPMSAGIPASVSALTVTFR-----YNDIASLEALFEDH---PGRIACVILEPATADEPQDGFLHEVRRLCHENGALFI 221 (431)
T ss_pred ccCCCCCCCChhHhccccccC-----CCCHHHHHHHHHhC---CCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEE
Confidence 00 01100000 011111 23899999988642 1234455554433333333449999999999999999
Q ss_pred eeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcC-----CcccccccccccCCcc
Q 041829 268 VDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLST-----NPEFLKNKASQANMVV 342 (486)
Q Consensus 268 vD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~-----~~~yl~~~~~~~~~~~ 342 (486)
+|+++.|+... ........++ ..|.+++ -|.++..+..|+++.++. +.+.+.. ...++...
T Consensus 222 ~DEv~tG~~~~-~~g~~~~~gv-~PDi~t~--gK~lggG~p~~av~~~~~--i~~~~~~~~~~~~~~~~~~~-------- 287 (431)
T PRK06209 222 LDEMITGFRWH-MRGAQKLYGI-VPDLSCF--GKALGNGFAVSALAGKRE--YMELGGLEHTDRERVFLLST-------- 287 (431)
T ss_pred EEcccccCCcC-cchhhHHhCC-Ccceeee--hhhhcCCcccEEEEEHHH--HHhhhcccccCCCCceeecc--------
Confidence 99998665321 1000101123 4677665 588876566788777542 2222100 00111000
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEE-e-cCCCceEEEEEe-cCCC
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEV-V-TPRIFSLVCFRL-LPPH 415 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~-~-~~~~~~~v~f~~-~~~~ 415 (486)
+ ..+.+....++.++++.+..++ +.++..++.++|++.|++ ++ +.. + .......+.+.. .+..
T Consensus 288 -----T-~~~np~~~aaa~a~l~~i~~~~---~~~~~~~~g~~l~~~L~~~~~~~~-~~~~vr~~G~~~~~~~~~~~~~~ 357 (431)
T PRK06209 288 -----T-HGAETHALAAAIATMAIYRDED---VIERLHEQGAKLAAGVNEAAAEHG-LQDHVRVSGRPCCLTYSTLDGNG 357 (431)
T ss_pred -----C-CCCCHHHHHHHHHHHHHHhccC---HHHHHHHHHHHHHHHHHHHHHhCC-CCeEEEeecceEEEEEecCCccc
Confidence 0 0111122334455566654443 345555666666666644 42 221 1 111111111211 1111
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALLA 481 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~~ 481 (486)
.........+.+++.+.|. ++. .+++ +..+|++||++++++|.++..++.+
T Consensus 358 ---~~~~~~~~~~~~~l~~~Gi-~~p--------~l~i---s~~ht~~dId~~l~~l~~~l~~~~~ 408 (431)
T PRK06209 358 ---QPSQAFRTLFLQETIRRGV-LMP--------SLVV---SYAHGDADIERTIDAVHGALGVYRK 408 (431)
T ss_pred ---CCcHHHHHHHHHHHHHCCc-ccc--------cccc---cccCCHHHHHHHHHHHHHHHHHHHH
Confidence 0012334567788888885 332 2333 3467999999999999999888743
No 370
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.30 E-value=7.3e-09 Score=105.23 Aligned_cols=291 Identities=12% Similarity=0.075 Sum_probs=151.3
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCC----CCeEEEecCCCchhHHHHHHHhCCC-CCC----e---EEEeC--
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSL----EKLVVYASDQTHSALQKACQIGGIH-PQN----F---RVLKT-- 207 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~----~~~~v~~s~~~H~s~~~a~~~~g~g-~~~----v---~~v~~-- 207 (486)
..+|++|||||+..|+..||....+.....|. +..+|-.....|-...-+....|.. ..+ . ..++.
T Consensus 105 ~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~p~ 184 (431)
T TIGR03251 105 HLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPK 184 (431)
T ss_pred EEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccCCccccccCCCCCCCccCCCCc
Confidence 47999999999999999998752110001111 1234444445565544444433321 000 0 00111
Q ss_pred -----CCCC-C--C---ccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc----CChHHHHHHHHHhCCEEEeeccc
Q 041829 208 -----DSST-N--Y---SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV----DPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 208 -----~~~~-~--~---~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i----d~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
+... . - .-+++++++.+.. .+..+.+|++.......|.+ +.+++|.++|++||+.+++|+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~~~iAavivEPv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~ 261 (431)
T TIGR03251 185 LTFPLDAPNLDQVIALEEEALRQARAAFAE---RPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALLIFDEVQ 261 (431)
T ss_pred ccCCccccccchhhHHHHHHHHHHHHHHHh---CCCcEEEEEEeccccCCCCcCCCHHHHHHHHHHHHHcCCEEEEecch
Confidence 0000 0 0 0123344444432 23457788888777777776 35899999999999999999998
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCc-hHHHH-HhcCCcccccccccccCCccCCCCCccC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDR-NTLIQ-SLSTNPEFLKNKASQANMVVDYKDWQIP 350 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~-~~~~~-~~~~~~~yl~~~~~~~~~~~~~~~~~~~ 350 (486)
.|+.....-+.....++ ..|.++++ |.+ | .+|++ .+++ ..+.. .+. ..... ..+ -
T Consensus 262 tG~GrtG~~~a~~~~gv-~PDi~~~g--K~~--~-~~g~~-~~~~i~~~~~~~~~-~~~~~--------------~~T-~ 318 (431)
T TIGR03251 262 TGVGLTGTAWAYQQLGV-QPDIVAFG--KKT--Q-VCGIM-AGRRVDEVADNVFA-VPSRL--------------NST-W 318 (431)
T ss_pred hccCccchHHHHHhcCC-CCCEEEec--ccC--c-cceEE-ecchHHHhhhhccc-Ccccc--------------CCC-C
Confidence 86533211111111233 57888764 544 3 23444 4432 11110 010 00000 001 1
Q ss_pred CCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEecCCCCCcccchHHHH
Q 041829 351 LGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNH 426 (486)
Q Consensus 351 ~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~ 426 (486)
.+.+.....+.++++.+..++ .+++..++.++|.+.|++ .+++..-......++.+.+.. .....
T Consensus 319 ~gnpl~~aaa~a~L~~l~~~~---l~~~~~~~g~~l~~~L~~l~~~~~~~i~~vrg~G~~~~i~~~~--------~~~~~ 387 (431)
T TIGR03251 319 GGNLVDMVRATRILEIIEEER---LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPS--------TADRD 387 (431)
T ss_pred CCCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHHHHhCccceecccccceeEEEEeCC--------HHHHH
Confidence 122222234445555554443 334455556666655544 432321112233455666642 22345
Q ss_pred HHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 427 KLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 427 ~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
.+...+.++|. ++.+. +...+|++. ...+|++||++++++|.+
T Consensus 388 ~~~~~l~~~Gv-l~~~~---g~~~lr~~P-~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 388 EVIRQLYREGV-LLLGC---GERSIRFRP-PLTVTREEIDAAIDAIRR 430 (431)
T ss_pred HHHHHHHhCCe-EEecC---CCCeEEEEC-CccCCHHHHHHHHHHHHh
Confidence 68888888884 44332 235799998 888999999999999875
No 371
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.29 E-value=6e-09 Score=98.58 Aligned_cols=290 Identities=14% Similarity=0.092 Sum_probs=168.3
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhHHHHHHHhCCCCCCeEEEeCCCC----------
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSALQKACQIGGIHPQNFRVLKTDSS---------- 210 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~---------- 210 (486)
..+|++||||||-+||++||... ....|+ ....-|-+..-++.+-|+ ...+.+.+..
T Consensus 111 ~vfF~nsGsEANelal~mar~Yt---------~~~diIa~r~~YHG~t~~t~glt~~---~~~k~~~~~~~~~~~~~~~P 178 (442)
T KOG1404|consen 111 VVFFVNSGSEANELALKMARLYT---------GNLDIIARRNSYHGNTLYTLGLTGL---SPWKQNFPGVASGVHHTMNP 178 (442)
T ss_pred EEEEecCCchHHHHHHHHHHHhc---------CCceEEEeeccccCCchhhcccccC---CcccccCCCCCCcccccCCC
Confidence 48999999999999999999863 222333 344457666656655555 3333222110
Q ss_pred ----CCCccC-----HH----HHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeecccc
Q 041829 211 ----TNYSLS-----PD----SLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 211 ----~~~~id-----~~----~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g 273 (486)
+-|.=+ .+ .|+..+..+.. ..+.+.++.......|.+++ +++..++||++|..++.|+++.
T Consensus 179 dp~r~~~~~~~~~e~~d~~a~~l~d~i~~~~~--~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqt 256 (442)
T KOG1404|consen 179 DPYRGIFGGSNEEEASDRYAKELEDLILYDGP--ETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQT 256 (442)
T ss_pred CcccccCCCCchhhhHHHHHHHHHHHHHhcCC--CceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhh
Confidence 001111 23 33334433322 22556666666666688876 8999999999999999999988
Q ss_pred chhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCC
Q 041829 274 GSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGR 353 (486)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr 353 (486)
|+.-..--|..--.++ .-|.+++ -|.++...+.|.+++..+ +...+..+..|... -.|.
T Consensus 257 GfGRtG~~wgfe~h~v-~PDIvTm--AKgiGnG~Pl~AVvtt~E--Ia~v~~~~~~~fnT----------------yggn 315 (442)
T KOG1404|consen 257 GFGRTGHMWGFESHGV-VPDIVTM--AKGIGNGFPLGAVVTTPE--IADVLNQKSSHFNT----------------YGGN 315 (442)
T ss_pred ccccccccccccccCC-CccHHHH--HhhccCCCcceeeecCHH--HHHHHHhccccccc----------------cCCC
Confidence 7654321111100111 2466665 488887788888888664 33344333323221 1222
Q ss_pred CCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCc--eEEEEEecCCCCC-cccchHHHHHHH
Q 041829 354 RFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTPRIF--SLVCFRLLPPHND-EDHGNKLNHKLL 429 (486)
Q Consensus 354 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~~~~--~~v~f~~~~~~~~-~~~~~~~~~~l~ 429 (486)
+.......++++.+-+ +++.++..+...||.+.|.++. +.+++.+... -++-+.+.....+ ..-.......+.
T Consensus 316 P~a~avg~aVL~Vike---e~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~ 392 (442)
T KOG1404|consen 316 PVACAVGLAVLKVIKE---ENLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIG 392 (442)
T ss_pred chhHHHHHHHHHHHHH---HhHHHHHHHHHHHHHHHHHHHhhcCCceeecccceeEEEEEEecccCCCCCcchHHHHHHH
Confidence 3233333445555544 4556778889999999998753 3555554321 1333333211100 000233345667
Q ss_pred HHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHH
Q 041829 430 DDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVM 472 (486)
Q Consensus 430 ~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l 472 (486)
+++.+.| +.+.-..+.|. ++||+. -...|++|||.+++..
T Consensus 393 ~~cke~G-vlvg~g~i~G~-vfriaP-PlciT~edi~f~~~~~ 432 (442)
T KOG1404|consen 393 EQCKELG-VLVGKGGIHGN-VFRIAP-PLCITKEDIDFAVEYF 432 (442)
T ss_pred HHHHHhC-eeeecccccce-EEEecC-CeeccHHHHHHHHHHH
Confidence 7777778 55666667776 999988 6678999997777755
No 372
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.28 E-value=8.5e-09 Score=104.25 Aligned_cols=308 Identities=11% Similarity=0.055 Sum_probs=164.3
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHHHh
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQIG 195 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~~~ 195 (486)
...++.+.|+++.+.+.+ ..+|+++||+|+..|+..||...... +.. .+. +|......|-...-+....
T Consensus 84 ~~~~lae~L~~~~p~~~~-------~v~f~~SGseA~e~AlklAr~~~~~~-g~~--~r~~ii~~~~~yHG~t~~als~~ 153 (422)
T PRK05630 84 PAIKLTRKLLNLTDNGLD-------HVFYSDSGSVSVEVAIKMALQYSKGQ-GHP--ERTRLLTWRSGYHGDTFAAMSVC 153 (422)
T ss_pred HHHHHHHHHHhhCCCCcC-------EEEEeCCcHHHHHHHHHHHHHHHHhc-CCC--CCcEEEEECCCcCCccHHHhccC
Confidence 344455567887642222 47999999999999999998753211 111 223 3444555565443333332
Q ss_pred CC--------C--CCCeEEEeCCCCCCCccCH-------HHHHHHHHHHHhCCCccEEEEEecC-Ccccccc----CChH
Q 041829 196 GI--------H--PQNFRVLKTDSSTNYSLSP-------DSLAEAISRDLTIGLIPFFLCATVG-TTSSTAV----DPLL 253 (486)
Q Consensus 196 g~--------g--~~~v~~v~~~~~~~~~id~-------~~L~~~i~~~~~~g~~p~~vv~~~~-~t~tG~i----d~l~ 253 (486)
+- + ...+..+|.... ...+. +.+++.+.+ .+.+|++.-. ....|.+ +.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~p~~~~--~~~~~~~~~~~~~~~~~~~~~------~iAAvi~EPi~qg~gG~~~~~~~~l~ 225 (422)
T PRK05630 154 DPEGGMHSLWKGTLPEQIFAPAPPV--RGSSPQEISEYLRSLELLIDE------TVAAIIIEPIVQGAGGMRFHDVALIE 225 (422)
T ss_pred CCcccccccccccCCCCeEcCCCcc--cCCChHHHHHHHHHHHHHHhh------ceEEEEEechhcCcCCcccCCHHHHH
Confidence 21 0 012344444321 01122 233333332 2445665542 4444554 3489
Q ss_pred HHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHHhcCCc--cc
Q 041829 254 ALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQSLSTNP--EF 330 (486)
Q Consensus 254 ~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~~~~~~--~y 330 (486)
+|.++|++||+++++|+++.|+.....-+.....++ ..|.+++ -|.++.. ...|+++.++. +.+.+.... ..
T Consensus 226 ~lr~lc~~~g~llI~DEv~tG~GrtG~~~a~~~~gv-~PDi~t~--gK~l~gG~~p~~av~~~~~--i~~~~~~~~~~~~ 300 (422)
T PRK05630 226 GVRTLCDKHDILLIADEIATGFGRTGELFATLAAGV-TPDIMCV--GKALTGGFMSFAATLCTDK--VAQLISTPNGGGA 300 (422)
T ss_pred HHHHHHHHcCCEEEEecceeCCCcCchhhHHHhcCC-CCCeeee--echhhcCccccceeeccHH--HHHHHhccCCCCc
Confidence 999999999999999999866432111111111123 4678766 5888554 24677776653 223332110 00
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC--CCceEEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP--RIFSLVC 408 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~--~~~~~v~ 408 (486)
+... . |. .+.+.......++++.+..+ ...++..++.++|++.|+.+.....+.+ -...++.
T Consensus 301 ~~h~----------~--T~-~g~Pla~aaa~aaL~~l~~~---~~~~~~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~ 364 (422)
T PRK05630 301 LMHG----------P--TF-MANPLACAVAHASLEIIETG---MWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGV 364 (422)
T ss_pred cccC----------C--CC-cCCHHHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHHhhcCCCeeeeeccccEEE
Confidence 0000 0 11 12222233444556555433 3455777778888877765322111111 1233555
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+.+... .....+.+.+.++| +++.+. + .++|+.. ....|++|||+++++|+++.+
T Consensus 365 ie~~~~--------~~~~~~~~~~~~~G-l~~~~~---g-~~l~~~P-pL~it~~~i~~~~~~l~~al~ 419 (422)
T PRK05630 365 VEMEQP--------VDMEEATQAAVDHG-VWLRPF---G-RLVYVMP-PYITTSEQIAQICAALAAAVK 419 (422)
T ss_pred EEECCc--------ccHHHHHHHHHHCC-eEEEec---C-CEEEEEC-CccCCHHHHHHHHHHHHHHHh
Confidence 555321 01246777788888 444432 3 4899988 778899999999999988764
No 373
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.23 E-value=2.3e-08 Score=98.78 Aligned_cols=325 Identities=14% Similarity=0.109 Sum_probs=174.0
Q ss_pred ccChhhHHHHHHHHHHHHHHcCCC-CCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCC-CeEEEe-cCCCc
Q 041829 109 ITSPAATELEMIVLDWLAKLLKLP-EDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLE-KLVVYA-SDQTH 185 (486)
Q Consensus 109 ~~~~~~~~le~~~~~~la~l~g~~-~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~-~~~v~~-s~~~H 185 (486)
...| +.+|-++ |+++..-. - ...+|++|||+|+-+|+.++++.+..+ |.+ +..++. ....|
T Consensus 85 t~~P-a~~LA~~----L~~~aP~~~l-------~~vFf~~sGSeAvEtAlKma~qY~~~~----G~p~r~~~Isr~~gYH 148 (449)
T COG0161 85 THEP-AIELAEK----LAELAPEGGL-------DHVFFTDSGSEAVETALKMALQYWRAR----GQPQRKKFISRRNGYH 148 (449)
T ss_pred CCch-HHHHHHH----HHHhCCCCCc-------cEEEEeCCchHHHHHHHHHHHHHHHhc----CCCcceEEEEeccCcC
Confidence 3445 4444444 77877511 1 148999999999999999999865432 222 333443 33346
Q ss_pred hhHHHHHHHhCCC----------CCCeEEEeCCC---CCC-Ccc------CHHHHHHHHHHHHhCC-CccEEEEEecCCc
Q 041829 186 SALQKACQIGGIH----------PQNFRVLKTDS---STN-YSL------SPDSLAEAISRDLTIG-LIPFFLCATVGTT 244 (486)
Q Consensus 186 ~s~~~a~~~~g~g----------~~~v~~v~~~~---~~~-~~i------d~~~L~~~i~~~~~~g-~~p~~vv~~~~~t 244 (486)
-+..-++.+.|.. ...+..+|... .+. ..- ..+.|++.|.+ .| ..+..+++.-.-.
T Consensus 149 G~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~---~g~~~IAAfI~EPv~g 225 (449)
T COG0161 149 GDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILE---HGPETIAAFIVEPVVG 225 (449)
T ss_pred cccchheeccCchhhhhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHh---cCcccEEEEEeccccc
Confidence 5554444444311 11223343322 010 111 24455555544 23 3455555554433
Q ss_pred c-ccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCch
Q 041829 245 S-STAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRN 318 (486)
Q Consensus 245 ~-tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~ 318 (486)
. .|.+-| ++++.+||++||+.++.|+.--|+.-...-+.-.-.++ .-|.+|+. |.+... .+.|.++++++
T Consensus 226 ~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi-~PDi~~~a--KGLT~GY~Pl~a~l~~~~- 301 (449)
T COG0161 226 GAGGMLVPPPGYLKRVREICDKYGILLIADEVATGFGRTGKMFACEHAGI-VPDILCLA--KGLTGGYLPLSAVLTSDR- 301 (449)
T ss_pred ccCCcccCChHHHHHHHHHHHHcCcEEEeecceeCCCcCchhhhhhhcCC-CCCeeeec--ccccccchhhHhHhhhHH-
Confidence 4 566644 89999999999999999997655432211111111122 46888876 777433 23566666653
Q ss_pred HHHHHhcCCc-ccccccccccCCccCCCCCccCCCCCCCcHHH---HHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc-C
Q 041829 319 TLIQSLSTNP-EFLKNKASQANMVVDYKDWQIPLGRRFRSLKL---WMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ-D 393 (486)
Q Consensus 319 ~~~~~~~~~~-~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~---~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~-~ 393 (486)
+.+.+.... .-+. -..+-....++. .+.++.+-.++ ++++..++..+|.+.|++ +
T Consensus 302 -I~~~~~~~~~~~f~----------------HG~TYsghPlacAaAla~L~i~e~e~---l~~~~~~~~~~l~~~L~~~l 361 (449)
T COG0161 302 -IYEAFSDGDAGAFM----------------HGHTYSGNPLACAAALANLDILEEED---LLERVAEIGAYLQAGLQAAL 361 (449)
T ss_pred -HHHHHhcccCCeec----------------cCCccccCHHHHHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHHhc
Confidence 222332221 1111 111112233333 34444444444 455666788888888886 4
Q ss_pred CCeEEecCC--CceEEEEEecCCCCCcc-cchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHH
Q 041829 394 LRFEVVTPR--IFSLVCFRLLPPHNDED-HGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWE 470 (486)
Q Consensus 394 ~~~~~~~~~--~~~~v~f~~~~~~~~~~-~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~ 470 (486)
++...+.+. ..-+..+.+..+..... -......++.+...++| +++.+. |. .+=++. -...|+++||++++
T Consensus 362 ~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~G-l~iRp~---g~-~i~~~P-Pliit~~eid~l~~ 435 (449)
T COG0161 362 ADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERG-LLIRPL---GD-VIYLMP-PLIITREEIDELVD 435 (449)
T ss_pred ccCCcEEEeeccceEEEEEEecccccccchhhhHHHHHHHHHHHCC-eEEeec---CC-EEEEcC-CccCCHHHHHHHHH
Confidence 433333322 12234455543221000 01234466777777888 666655 22 444444 44679999999999
Q ss_pred HHHHHHHHHHHh
Q 041829 471 VMQDKASALLAR 482 (486)
Q Consensus 471 ~l~~~~~~l~~~ 482 (486)
.+.+.+++..+.
T Consensus 436 ~l~~al~~~~~~ 447 (449)
T COG0161 436 ALREALDETLAD 447 (449)
T ss_pred HHHHHHHHHHhc
Confidence 999998876653
No 374
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=99.17 E-value=1e-08 Score=96.95 Aligned_cols=306 Identities=15% Similarity=0.119 Sum_probs=179.3
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSAL 188 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~ 188 (486)
.+.....+-.++.+.++++++.|++|. -+++.+|+|...-++.+..... .+. -|.+..-+..+.
T Consensus 44 Rsk~~~~v~~~a~~~lreLl~iPd~Y~-----VlflqGGat~qf~~~p~nLl~~----------~~~~yv~~g~Ws~~a~ 108 (365)
T COG1932 44 RSKEFKNVLEEAEKDLRELLNIPDDYK-----VLFLQGGATGQFAMAPMNLLGK----------RGTDYVDTGAWSEFAI 108 (365)
T ss_pred ccHHHHHHHHHHHHHHHHHhCCCCCce-----EEEEcCccHHHHHHHHHhhhcc----------cCceeEeeeehhHhHH
Confidence 345666677778888999999999873 3555566665554444433221 111 233333333444
Q ss_pred HHHHHHhC-CCCCCeEEEeCCCCCC-CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC-hHHHHHHHHHhCCE
Q 041829 189 QKACQIGG-IHPQNFRVLKTDSSTN-YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP-LLALGNIAKSNGMW 265 (486)
Q Consensus 189 ~~a~~~~g-~g~~~v~~v~~~~~~~-~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~-l~~I~~ia~~~g~~ 265 (486)
..+-++.. . ++..+.....+. .-.+++... +.++ -.+|..+...|.+|+--| ...+.. +..
T Consensus 109 ~eA~~~~~~~---~~~~~~~~~~~~~~iP~~~~~~--~~~~------~ayv~~~~NeTi~Gv~v~~~p~~~~-----~~~ 172 (365)
T COG1932 109 KEAKKVGKQP---KLIDARIEEAGYGSIPDLSKWD--FSDN------DAYVHFCWNETISGVEVPELPDIGS-----DGL 172 (365)
T ss_pred HHHHHhcccc---cccccceeccCccCCCChhhcc--cCCC------ccEEEEecCCcccceEccCCCCCCC-----Cce
Confidence 44444333 2 222222111111 133444433 2221 136889999999997633 333222 178
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
+++|++-+.+....+ +++.|.+.++.+|.++ |-|.+++++|+.. +.+.-+...+-+. ++.
T Consensus 173 ~v~D~SS~ilsr~iD--------vsk~dviyagaQKnlG-paGltvvIvr~~~-l~r~~~~~~P~if----------~y~ 232 (365)
T COG1932 173 LVADASSAILSRPID--------VSKYDVIYAGAQKNLG-PAGLTVVIVRPDL-LERAESYTLPSIF----------DYL 232 (365)
T ss_pred EEEecccHHhcCCCC--------hhHcceEEEehhhccC-ccceEEEEEcHHH-HhcccccCCchHh----------hch
Confidence 899988765544333 3478999999999997 5679999998753 3332221111111 111
Q ss_pred CCccCCCCCC---CcHHHH---HHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCC---CceEEEEEecCCC
Q 041829 346 DWQIPLGRRF---RSLKLW---MVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPR---IFSLVCFRLLPPH 415 (486)
Q Consensus 346 ~~~~~~sr~~---~~l~~~---~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~---~~~~v~f~~~~~~ 415 (486)
... ..+..+ ..+.++ ..++.+ ..-|++.+.++..+.++.|++.+.+.+-..-...+ ..-.|||.+..
T Consensus 233 ~~~-~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s~fy~~~v~~~~RS~mnV~f~~~~-- 309 (365)
T COG1932 233 THA-DNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKSDFYRNLVAKANRSRMNVTFTLVD-- 309 (365)
T ss_pred hhh-ccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCccccccchhhccceeEEEEcCc--
Confidence 000 011111 122222 223333 35588999999999999999999998333222111 23467888863
Q ss_pred CCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 416 NDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 416 ~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
.++...+.+.+.+.|.+...+... .+.+|+++ ......++++.|++-++...++
T Consensus 310 ------~~ld~~fv~eae~~gl~~lkGhr~--vgGmRasi-ynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 310 ------AELDKGFVAEAEAAGLIYLKGHRS--VGGLRASI-YNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ------HHHHHHHHHHHHHcCCceeccccC--CCceeeee-ecCCCHHHHHHHHHHHHHHHHh
Confidence 567788888888888777666332 23599999 7788999999999998877653
No 375
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.13 E-value=1.1e-07 Score=90.87 Aligned_cols=305 Identities=15% Similarity=0.036 Sum_probs=165.9
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCC---CC-C-CccC
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDS---ST-N-YSLS 216 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~---~~-~-~~id 216 (486)
..+|+++||+||..||..||.....+.... +-..|......|-...-++...+. .-...|.++ +- . ---|
T Consensus 118 rvff~nsGTeAne~ALK~Ark~~~~~~~~~--~t~~Iaf~nsyHG~tlgals~~~~---s~y~~~~~p~~p~v~~~~ynd 192 (433)
T KOG1401|consen 118 RVFFCNSGTEANETALKFARKFTGKKHPEK--KTKFIAFENSYHGRTLGALSVTGN---SKYGLPFDPIAPDVVTAEYND 192 (433)
T ss_pred EEEEecCCcHHHHHHHHHHHHhhcccCCcc--ceeEEEEecCcCCcchhHHHhhcc---cccCCCCCCCCCceeecccCC
Confidence 589999999999999999998654332111 112455556667555555554333 222222211 00 0 0227
Q ss_pred HHHHHHHHHHHHhCCCccEEEEEecCCcccccc--CC--hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCC
Q 041829 217 PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--DP--LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEA 292 (486)
Q Consensus 217 ~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--d~--l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~a 292 (486)
+.+|++.++.... .+..|++....-..|.+ +| +..|..+|+++|+.++.|+.+-|+.-..+.+.+..-++ .-
T Consensus 193 ~t~l~k~~~~h~~---~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~-~P 268 (433)
T KOG1401|consen 193 STALEKLFESHKG---EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGV-TP 268 (433)
T ss_pred HHHHHHHHHhCCC---ceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCc-CC
Confidence 9999999977542 14567777777666666 33 78999999999999999999887665554444433332 46
Q ss_pred CceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC-hhh
Q 041829 293 DSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG-LEN 371 (486)
Q Consensus 293 Ds~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g-~~g 371 (486)
|.+|+. |.|+...+.|+..++++- ...++...+ +.+.. ++ .+.+..--....+|..+. .+.
T Consensus 269 DI~t~a--K~L~gGlPigA~~v~~kV--~~~i~~~~~-l~hg~------------Tf-~gnpLacsa~~~~l~~l~~~e~ 330 (433)
T KOG1401|consen 269 DITTVA--KPLGGGLPIGATGVRDKV--AEMISPGDH-LYHGG------------TF-SGNPLACSAGIKVLDELKDPET 330 (433)
T ss_pred cceeeh--hhccCCceeEEEeehHHH--HhhcCCCCc-cccCc------------cc-CCChhhhhHHHHHHHHHcCHHH
Confidence 887764 888777889999998752 233332222 21110 00 111111123344555554 445
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEE
Q 041829 372 LQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYIL 451 (486)
Q Consensus 372 ~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~l 451 (486)
+++.-.....+++.+.+.+.+.+.-..-.--..-++-|.+..+.. ....+.+-...+...+.. .....+....
T Consensus 331 ~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~----~~~d~~~~~~ll~~~~~~---~~~~~gv~i~ 403 (433)
T KOG1401|consen 331 LKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVY----KFADAAREQGLLILTLGK---GLLEEGVRIA 403 (433)
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCceeeeeeeEEEEEEEEeechh----hhhhhhhhhhHHHHHHhc---ccccceEEEe
Confidence 556666666778888888877654322111111122233221110 011111111122211100 0001111222
Q ss_pred EEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 452 RFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 452 Ri~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
++.+++..+++|.+.++++.+.+...++.
T Consensus 404 P~~~l~~~~~~E~i~~~l~i~~~~l~~~~ 432 (433)
T KOG1401|consen 404 PIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred ccccccccCcHHHHHHHHHHHHHHHHHhc
Confidence 32233445568999999999988877653
No 376
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.10 E-value=5.6e-08 Score=89.96 Aligned_cols=298 Identities=14% Similarity=0.156 Sum_probs=166.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH-
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC- 192 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~- 192 (486)
..++++- +.++||++. .+-+++|.||+.+|+..||.+-....+-.......+.+-...|-....+.
T Consensus 103 ~~~f~~~----vt~lf~~~k---------vlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais 169 (427)
T KOG1402|consen 103 LGEFAEY----VTKLFGYDK---------VLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAIS 169 (427)
T ss_pred HHHHHHH----HHHhcCcce---------eeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEE
Confidence 3455555 899999876 56788889999999999997654431111011222222333342111110
Q ss_pred ------HHhCCCCC---CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHH
Q 041829 193 ------QIGGIHPQ---NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIA 259 (486)
Q Consensus 193 ------~~~g~g~~---~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia 259 (486)
...|.|.- .+..||.+ |.++|+.++++.. ....++.--.-..|++-| ++++.++|
T Consensus 170 ~s~d~ds~~~fgp~~P~~~~~v~Y~-------d~eale~~l~~~~-----vaaFivEPIQGEaGVvvP~~GYL~~vreLC 237 (427)
T KOG1402|consen 170 LSTDPDSWDGFGPFLPGVVDKVPYG-------DAEALEVALKSPN-----VAAFIVEPIQGEAGVVVPPPGYLKKVRELC 237 (427)
T ss_pred ecCCcchhhccCCCCCCcceeeccC-------CHHHHHHHhcCCC-----eeEEEeeccccccceEeCCchhHHHHHHHH
Confidence 11222211 13444432 8899999997632 233444444556777744 89999999
Q ss_pred HHhCCEEEeeccccchhc----cCccchhcccCCcCCCceeeecccccC-CCCcceEEEEeCchHHHHHhcCCccccccc
Q 041829 260 KSNGMWFHVDAAYAGSAC----ICPEYRQYIDGVEEADSFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNK 334 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~~----~~~~~~~~~~~~~~aDs~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~ 334 (486)
++|+.+++.|..+.|..- .+-++... +-|.+.+. |.+. +-++.+.+++.+. .+. .+ .+
T Consensus 238 tkynvl~I~DEvQTGl~RTGk~la~d~env-----~PDivilg--KalSGG~~Pvsavl~~~~-im~-~~--~p------ 300 (427)
T KOG1402|consen 238 TKYNVLLIADEVQTGLARTGKLLACDYENV-----RPDIVILG--KALSGGVYPVSAVLADDD-IML-NI--KP------ 300 (427)
T ss_pred HhhcEEEEehhhhhcccccCcEEEeehhhc-----CCCeEEEe--ccccCCeeeeEEEEecHH-HHh-cc--CC------
Confidence 999999999998877442 11122221 45776654 6553 3345566555442 221 11 11
Q ss_pred ccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCC-e----EEe-cCCCceEEE
Q 041829 335 ASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLR-F----EVV-TPRIFSLVC 408 (486)
Q Consensus 335 ~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~-~----~~~-~~~~~~~v~ 408 (486)
.+.+-..+ ...++...++..+..---+.+.+++..+...|+.+|.+++. | ..+ ....++-+.
T Consensus 301 ----------geHgsTyg--gNpLg~~vaiAalevi~eekL~era~~lG~~l~~~L~~l~~~~p~~v~~VRGrGl~~ai~ 368 (427)
T KOG1402|consen 301 ----------GEHGSTYG--GNPLGCAVAIAALEVIVEEKLVERAAKLGEILRDQLNKLQKKFPHVVKEVRGRGLLNAIV 368 (427)
T ss_pred ----------CccccccC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchhheeeccceEEEEE
Confidence 11111111 12333333333333333356788899999999999988753 2 111 122233333
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
|...+. .....-.++-.+.+.|. ..-++ ++ ..+|++. -...+++|+++-+++|.+..
T Consensus 369 i~~~~~------~~~~aw~~cl~lk~~g~-LAkpt--H~-~IiRfaP-PL~I~e~dl~eg~e~i~k~i 425 (427)
T KOG1402|consen 369 INPSKT------SGQDAWDVCLALKENGL-LAKPT--HG-NIIRFAP-PLVISEEDLREGIEAIEKTI 425 (427)
T ss_pred eccccc------cchhHHHHHHccccccc-ccCCC--CC-CeEEecC-CcccCHHHHHHHHHHHHHHh
Confidence 332221 12333456666667773 22222 23 3899988 66789999999999998764
No 377
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.08 E-value=5.9e-07 Score=96.84 Aligned_cols=234 Identities=10% Similarity=0.054 Sum_probs=126.8
Q ss_pred HHHHHHHHHHH--hCCCccEEEEEecC-CccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCc
Q 041829 218 DSLAEAISRDL--TIGLIPFFLCATVG-TTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVE 290 (486)
Q Consensus 218 ~~L~~~i~~~~--~~g~~p~~vv~~~~-~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~ 290 (486)
+.+++.|++.. ..+..+.+|++.-. ....|.+-| +++|.++|++||+.++.|+.+.|+.-...-+.....++
T Consensus 567 ~~le~~l~~~~~~~~~~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv- 645 (817)
T PLN02974 567 SYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGC- 645 (817)
T ss_pred HHHHHHHHhhccccCCCCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCC-
Confidence 45666665321 12344556666542 344566643 79999999999999999999888654322222212233
Q ss_pred CCCceeeecccccCCCC-cceEEEEeCchHHHHHhcCCc--ccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHh
Q 041829 291 EADSFNMNAHKWFLTNF-DCSALWVKDRNTLIQSLSTNP--EFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY 367 (486)
Q Consensus 291 ~aDs~~~~~hK~l~~p~-~~g~l~~r~~~~~~~~~~~~~--~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~ 367 (486)
..|.+++. |.+.+.+ +.|+++++++ +.+.|.... ..+... .| -.+.+.....+.++++.+
T Consensus 646 ~PDIi~~g--KgLtgG~~Plaa~l~~~~--I~~~f~~~~~~~~~~hg------------~T-y~gnpl~cAaala~L~~~ 708 (817)
T PLN02974 646 KPDIACYA--KLLTGGLVPLAATLATEE--VFEAFRGPSKLDALLHG------------HS-YTAHPMGCAAAAKALQWY 708 (817)
T ss_pred CCCEEeec--ccccCCCCccEEEEEcHH--HHHhhccccccCCcccC------------CC-CCcCHHHHHHHHHHHHHH
Confidence 47888876 8887663 6888888753 233332100 000000 00 112122223444455555
Q ss_pred Chh-hHHHHHHHHHHHHHHHHHHH----hcCCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHH-ccCcEEEE
Q 041829 368 GLE-NLQGYIRNHIQLAKHFEGLV----AQDLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDIN-STGKIFIS 441 (486)
Q Consensus 368 g~~-g~~~~~~~~~~~a~~l~~~l----~~~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~-~~g~~~~~ 441 (486)
-.+ -++.+.++..++..++.+.| +++|.+.-+ .....++.+.+...............++.+.+. +.| +++.
T Consensus 709 ~~~~~~~~l~~~~~~l~~~l~~~l~~~l~~~p~V~~V-Rg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~G-l~~r 786 (817)
T PLN02974 709 KDPSTNPNLIPPGSRLRELWDEELVRAISSLPNVERV-VSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDG-IYAR 786 (817)
T ss_pred HcccHHHHHHHHHHHHHHHHHHHHHHHHhhCCCeeEE-EeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCC-EEEE
Confidence 333 23344455555555555444 445443222 112234555554321100001234466777777 777 4544
Q ss_pred eeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHH
Q 041829 442 HTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKA 476 (486)
Q Consensus 442 ~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~ 476 (486)
+. | +++|+.. .+.+++++++++++.|.+.+
T Consensus 787 ~~---G-nvi~l~p-P~~i~~e~l~~~~~~l~~~~ 816 (817)
T PLN02974 787 PL---G-NVVYLMC-GPTTSPETCTRLLRKVYRRL 816 (817)
T ss_pred ec---C-CEEEEeC-CCCCCHHHHHHHHHHHHHHh
Confidence 32 2 4788876 78999999999999997653
No 378
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=99.05 E-value=5.9e-08 Score=88.85 Aligned_cols=324 Identities=15% Similarity=0.178 Sum_probs=204.8
Q ss_pred HHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEec----CCCchhHHHHH
Q 041829 117 LEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYAS----DQTHSALQKAC 192 (486)
Q Consensus 117 le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s----~~~H~s~~~a~ 192 (486)
..+-++..++.++|.... +..+.++ -..|+..++...-+-. .++-.|+.. ...||+++.-+
T Consensus 112 ~De~il~l~~~iVGA~e~-------EvavmNs-LTvNlh~Ll~sFyKPT-------ekR~KILlE~kaFPSDhYAiesQ~ 176 (465)
T KOG3846|consen 112 IDEPILPLLAPIVGAQEN-------EVAVMNS-LTVNLHSLLISFYKPT-------EKRFKILLEKKAFPSDHYAIESQC 176 (465)
T ss_pred cchhhhhhhhhhccCCch-------hhhhHhh-hhhHHHHHHHHhcCCc-------chhhhhhhccCCCCchHHHHHhhh
Confidence 334466678999998775 3444443 3456665554332110 022234433 23589999999
Q ss_pred HHhCCCCC-CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecc
Q 041829 193 QIGGIHPQ-NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 193 ~~~g~g~~-~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A 271 (486)
++-|+... ..+-+...++ .-.+..+++-+.|++ +|....+|+.+.....||..-++.+|..--+..|+++=.|=|
T Consensus 177 ~lhG~~~e~sm~~iePREG-EetlRteDILd~IEk---ngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLA 252 (465)
T KOG3846|consen 177 KLHGISPENSMIQIEPREG-EETLRTEDILDTIEK---NGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLA 252 (465)
T ss_pred hhcCCChHHheEEeccccc-ccchhHHHHHHHHHh---cCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhh
Confidence 99999543 4455554433 347788888777765 466677888888899999999999999666677999999999
Q ss_pred ccchhccCccchhcccCCcCCCceeeecccccC-CCCcceEEEEeCchHHHHHhcCCcccccccccccC---CccCC--C
Q 041829 272 YAGSACICPEYRQYIDGVEEADSFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQAN---MVVDY--K 345 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~---~~~~~--~ 345 (486)
|+.+-....-+.+ ++|..++...|++. ++.|+|.+++..+.. ......-.+|..+..+... ...++ +
T Consensus 253 HAvgNVpL~LHdW------gVDFACWCSYKYlnaGaGgIgGlFvHekh~-~~~~prl~GWwgh~~s~RF~Mdnvl~lipG 325 (465)
T KOG3846|consen 253 HAVGNVPLQLHDW------GVDFACWCSYKYLNAGAGGIGGLFVHEKHT-KESLPRLAGWWGHDPSKRFQMDNVLELIPG 325 (465)
T ss_pred hhhcCCceEEeec------CCceEEEeeecccccCCCccceeeeehhhh-cchhhHHhhhccCCcchhhhhccccccCcc
Confidence 8866544332222 79999999999996 456788888876532 2222222344443322111 11111 1
Q ss_pred CCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCe-----------EEecCC----CceEEE
Q 041829 346 DWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRF-----------EVVTPR----IFSLVC 408 (486)
Q Consensus 346 ~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~-----------~~~~~~----~~~~v~ 408 (486)
-.++..|.+ ....++-.+++.+.+..+.++..+..-++.|+...++...|. .++.|. ....++
T Consensus 326 a~GfRiSNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTgYleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLs 405 (465)
T KOG3846|consen 326 ALGFRISNPPIIDVVALRSSLELFAQFNINELRKRSLLLTGYLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLS 405 (465)
T ss_pred ccccccCCCcHhHHHHHHhhHHHHHHhhHHHHhhhhhhHHhHHHHHHHHhcccCchhhhcceeEEEeCCcccccccceEE
Confidence 111111222 122456667777777778889899999999998888764332 333332 122344
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
..+..+ +..++..|.++|.+. . -...+++|++....+++-.||-.++++|.++...+.
T Consensus 406 l~Fssp----------~~~vfqeL~krGv~~---D-kR~PNvIRvAPvpLYN~f~Dvy~f~n~L~e~~d~~e 463 (465)
T KOG3846|consen 406 LYFSSP----------TPKVFQELHKRGVIG---D-KRRPNVIRVAPVPLYNTFSDVYIFVNALNEAMDKLE 463 (465)
T ss_pred EEeCCC----------chHHHHHHHHcCeec---c-ccCCCceEeecchhhccHHHHHHHHHHHHHHHHHhh
Confidence 444321 256778888888322 1 223368999998889999999999999999887654
No 379
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.97 E-value=4.3e-07 Score=85.18 Aligned_cols=327 Identities=17% Similarity=0.164 Sum_probs=180.2
Q ss_pred ccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCc--hhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecC
Q 041829 105 GFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGT--ASEAVLVVLLAARDKALKRVGKNSLEKLVVYASD 182 (486)
Q Consensus 105 ~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~g--gt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~ 182 (486)
--.|..+...-.|... +.+.||++.. +-|.- |.|.++..+.. .. . ...++.+..+.+
T Consensus 72 DEAYagsrs~~~L~~a----vkdifGfq~~---------iPthQGRgAE~Il~~i~i--k~---~---~~~pg~~~~~~s 130 (471)
T COG3033 72 DEAYAGSRSYYALADA----VKDIFGFQYT---------IPTHQGRGAENILIPILI--KK---G---EQEPGSKMVAFS 130 (471)
T ss_pred chhhcccccHHHHHHH----HHHhcCceee---------eeccCCccHHHHHHHHHh--hh---c---cccCCccccccc
Confidence 3466777777777777 7788887542 33332 34555544331 11 0 011444555566
Q ss_pred CCchhHHH-HHHHhCCCCCCeEEEeCCCCC--------CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc---cC
Q 041829 183 QTHSALQK-ACQIGGIHPQNFRVLKTDSST--------NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA---VD 250 (486)
Q Consensus 183 ~~H~s~~~-a~~~~g~g~~~v~~v~~~~~~--------~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~---id 250 (486)
..|+..-+ -.+..|. .++-+++++.. .+.+|++.|++.|++.-. ...|.++.....++..|. ++
T Consensus 131 N~~FdTTr~h~~~ng~---~~~n~~~~ea~d~~~~~pFKGd~D~~kLe~lidevG~-~nvp~I~~tiT~NsagGQpVSm~ 206 (471)
T COG3033 131 NYHFDTTRGHIQINGA---TPRNVYVDEAFDTEVKYPFKGNFDLEKLERLIDEVGA-DNVPYIVLTITNNSAGGQPVSMA 206 (471)
T ss_pred cceecchhHHHHhcCC---ccccccccccccccccCCCCCccCHHHHHHHHHHhCc-ccCcEEEEEEeccccCCCcchHH
Confidence 77775444 3445555 44444444311 247899999999987643 335655544445555553 47
Q ss_pred ChHHHHHHHHHhCCEEEeeccccc-hhccCc----cchhc-c-----cCCcCCCceeeecccccCCCCcceEEEEeCchH
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAG-SACICP----EYRQY-I-----DGVEEADSFNMNAHKWFLTNFDCSALWVKDRNT 319 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~-~~~~~~----~~~~~-~-----~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~ 319 (486)
+++++.+||++|++.++.|+|--+ ...+.. .+++. + .-++.+|-+++++-|=..++. .|++.++|+..
T Consensus 207 n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvnm-GGfl~~~D~~~ 285 (471)
T COG3033 207 NMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVNM-GGFLCFKDDSF 285 (471)
T ss_pred hHHHHHHHHHHcCCcEEeehhhhhhhhhhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceecc-ccEEEecCccH
Confidence 789999999999999999997432 222222 22221 1 114579999999999998886 58899999853
Q ss_pred H---HHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHH-hChhhHHHHHHHHHHHHHHHHHHHhcCCC
Q 041829 320 L---IQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRL-YGLENLQGYIRNHIQLAKHFEGLVAQDLR 395 (486)
Q Consensus 320 ~---~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~-~g~~g~~~~~~~~~~~a~~l~~~l~~~~~ 395 (486)
+ ..+-....-|- + +..++--.||-.. ++...|+. +..+ .+++..+..+||.+.|.+. |
T Consensus 286 fDvy~~~~~~~V~~e--------G---~~tYGgl~Grdme--alAvGL~e~~~~~----yl~~Rv~Qv~YL~~~l~~~-G 347 (471)
T COG3033 286 FDVYEECRTLVVVQE--------G---FPTYGGLAGRDME--ALAVGLREGVNFD----YLAHRVAQVQYLADGLEEA-G 347 (471)
T ss_pred HHHHHHHHhheEeec--------c---ccccCcccchhHH--HHHHHHHHhcCcH----HHHHHHHHHHHHHHHHHhc-C
Confidence 2 11111111110 0 0011111122212 22222222 1223 3444555568888999887 8
Q ss_pred eEEecCCCceEEEEEe---cCCCCCcccchHHHHHHHHHHHccCcE-EEEeeeE------C-C------EeEEEEEecCC
Q 041829 396 FEVVTPRIFSLVCFRL---LPPHNDEDHGNKLNHKLLDDINSTGKI-FISHTVL------S-G------KYILRFAVGAP 458 (486)
Q Consensus 396 ~~~~~~~~~~~v~f~~---~~~~~~~~~~~~~~~~l~~~l~~~g~~-~~~~~~~------~-~------~~~lRi~~~~~ 458 (486)
+.++.|...+-+-+.. .|. ...++.. .+.|...|...+++ .+.-+.+ + | ...+|+++.-.
T Consensus 348 Vpi~~paGGHavfvda~~~lph-ip~eqFp--aqala~ely~e~GiRavElG~~~~~rd~ktg~q~~~~~elvRltipRr 424 (471)
T COG3033 348 VPIVQPAGGHAVFVDAGKFLPH-IPAEQFP--AQALACELYKEAGIRAVELGSFSLGRDPKTGKQHPPPAELVRLTIPRR 424 (471)
T ss_pred CeeEecCCCceEEeehhhhcCC-CChhhCc--HHHHHHHHHHHhCeeeeeeeceecccCCCccccCCCchheeeEecccc
Confidence 9887665544443332 121 0001111 13444445443333 2221111 1 1 15799999555
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q 041829 459 LTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 459 ~~t~~di~~~~~~l~~~~~~ 478 (486)
.-|.+++|.++++++++.++
T Consensus 425 tYt~~HmD~V~~a~~~l~e~ 444 (471)
T COG3033 425 TYTQTHMDFVIEAFKALKEN 444 (471)
T ss_pred ccchhHHHHHHHHHHHHHhc
Confidence 56899999999999888754
No 380
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.96 E-value=6.8e-08 Score=96.57 Aligned_cols=364 Identities=14% Similarity=0.108 Sum_probs=205.4
Q ss_pred hhhhhhcCCCCCCCCCCCHHHHHhhHHHHHHhhcCCCCcCCCCcccccCCCCCCHHHHHHHHHHH-----hcCcCccccc
Q 041829 35 PGYLHNLIPDSAPHHPESLQNVLDGYIDIQEKILPGVTHWQSPNYFAYYPSNSSVAGFLGEMLSA-----GLNIVGFSWI 109 (486)
Q Consensus 35 ~~~~~~~~~~~~p~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~l~~-----~~n~~~~~~~ 109 (486)
|+.++...+..+|+ |..+.++++ .+.+...+|. -|.+=-=+||+.+. .++.+...++.. .+.+++....
T Consensus 85 P~~Ir~~~~l~~~~-~~~E~eml~---~l~~ia~kNk-~~ksfIGmGYyn~~-vP~~I~RNilenp~W~TqYTPYQ~EIs 158 (1001)
T KOG2040|consen 85 PKSIRLKRPLKMDK-PLCESEMLQ---HLEDIASKNK-IWKSFIGMGYYNTH-VPAVILRNILENPGWYTQYTPYQAEIS 158 (1001)
T ss_pred chhhcccchhcCCC-CcCHHHHHH---HHHHHHhhhh-HHHHhhcccccccc-CcHHHHHHhhhCCcceeccCCCchhhh
Confidence 44455555555644 678899999 8888776665 23322223355443 333344444322 1222223334
Q ss_pred cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHH
Q 041829 110 TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQ 189 (486)
Q Consensus 110 ~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~ 189 (486)
++..-..+-.+++ ++++.|+|-+ +..+..-||.|.....++.+.. ++..++++...|+...
T Consensus 159 QGRLEsllNyQTm--i~dlTGL~~a-------NASLLDEgTAaaEAm~l~~~~~----------krkk~vvd~~~hpqtl 219 (1001)
T KOG2040|consen 159 QGRLESLLNYQTM--ITDLTGLPMA-------NASLLDEGTAAAEAMALCNRIN----------KRKKFVVDSNCHPQTL 219 (1001)
T ss_pred hhhHHHHhhhHHh--hhhccCCccc-------chhhhccchhHHHHHHHHHhhc----------ccceEEecCCCCcchh
Confidence 5555666667766 9999999875 5666666775544333334433 3344888999998777
Q ss_pred HHHHH----hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCE
Q 041829 190 KACQI----GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMW 265 (486)
Q Consensus 190 ~a~~~----~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~ 265 (486)
..++. +|+ ++... |++.... .. .....|.+..|.| .|.+.|..++++.+++.|..
T Consensus 220 sV~~TRa~~~~i---~v~~~----------~~~~~~~---s~----~~v~gvlvQYP~t-~G~i~d~~el~~~a~~~~s~ 278 (1001)
T KOG2040|consen 220 SVVKTRAKGFGI---KVVVS----------DIKEADY---SS----KDVSGVLVQYPDT-EGSVLDFDELVELAHANGSL 278 (1001)
T ss_pred hhhhccccccce---eEEec----------CHHHhhc---cc----cceeEEEEEcCCC-CCcccCHHHHHHHhhccCce
Confidence 66553 333 32222 2222111 11 1135677888776 49999999999999999988
Q ss_pred EEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCc-----ceEEEEeCchHHHHHhcCCcccccccccccCC
Q 041829 266 FHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFD-----CSALWVKDRNTLIQSLSTNPEFLKNKASQANM 340 (486)
Q Consensus 266 lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~-----~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~ 340 (486)
+++-.-.-+..++-| .... +||+...+.+.++ +|.| .|++.+++ .+ .+..|+.+.+-..+..+
T Consensus 279 vv~atDLLaLtiLrp-Pgef-----GaDIavGSsQRFG-VPlGYGGPHAaFfAv~~--~l---~R~mPGRiiGvtkD~~g 346 (1001)
T KOG2040|consen 279 VVMATDLLALTILRP-PGEF-----GADIAVGSSQRFG-VPLGYGGPHAAFFAVSE--SL---VRMMPGRIIGVTKDALG 346 (1001)
T ss_pred EEEeehhhHHHccCC-hhhc-----CceeeeccccccC-ccccCCCchHHHHHHHH--HH---HhhCCCceEeeeecccc
Confidence 654322111112211 1122 8999999988864 4544 44444432 12 22334433322111111
Q ss_pred ccCCCCCcc----CCCCCC-------CcHHHHHHHH-----HhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecCCCc
Q 041829 341 VVDYKDWQI----PLGRRF-------RSLKLWMVLR-----LYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTPRIF 404 (486)
Q Consensus 341 ~~~~~~~~~----~~sr~~-------~~l~~~~~l~-----~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~~~~ 404 (486)
...+. ..+ |.-||- .+-++.+.+. ++|.+|++++.++....+..|...|++. |-++++.+.+
T Consensus 347 k~a~R-LALQTREQHIrRDKATSNICTAQALLANmaAmyaiYHGp~gL~~IArrvh~~T~~l~~~l~~a-ghel~~k~fF 424 (1001)
T KOG2040|consen 347 KEAYR-LALQTREQHIRRDKATSNICTAQALLANMAAMYAIYHGPHGLKEIARRVHNLTLILAEGLKNA-GHELQHKPFF 424 (1001)
T ss_pred cHHHH-HHHHHHHHHhhhhccchhhhHHHHHHHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHHHHHhhc-chhhcccccc
Confidence 10000 000 111221 1222222222 3599999999999999999999999987 7888888877
Q ss_pred eEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 405 SLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 405 ~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
-.+.++.... ..++.++..+++.- +. .+. .+.+-+++ -..++++|+|.++..+.
T Consensus 425 DTLkI~~~~s----------~~~~l~rA~~~~iN-lr--~~e-d~tigvsl-DETv~~~DvddLl~vf~ 478 (1001)
T KOG2040|consen 425 DTLKIRCGCS----------AEEVLDRAAKRQIN-LR--LVE-DGTIGVSL-DETVTEKDVDDLLWVFN 478 (1001)
T ss_pred ceEEEEecCc----------HHHHHHHHHhhcCc-eE--Eee-cCceEEee-cccccHHHHHHHHHHHc
Confidence 7777776531 13444444444311 11 111 13566777 88999999999999885
No 381
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=98.92 E-value=8.8e-08 Score=85.83 Aligned_cols=254 Identities=10% Similarity=0.004 Sum_probs=145.0
Q ss_pred eEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHH
Q 041829 176 LVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLAL 255 (486)
Q Consensus 176 ~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I 255 (486)
..|+.-..++..+.-.|.+-++ +|+.+|.++ +|.++.|++.+.++.+.+ |.++.+|.+.|+||.+-..+.|
T Consensus 112 eKIl~cPPtysMY~v~A~iNd~---eVvkvpl~p--dF~lnvdai~evl~~ds~----iK~~F~tSPgNPtg~~ik~~di 182 (375)
T KOG0633|consen 112 EKILDCPPTYSMYVVDAAINDA---EVVKVPLNP--DFSLNVDAIAEVLELDSK----IKCIFLTSPGNPTGSIIKEDDI 182 (375)
T ss_pred cceeecCCcceeEEEEeecCCc---eEEEecCCC--CccccHHHHHHHHhcccc----ceEEEEcCCCCCCcccccHHHH
Confidence 5566555555444445666778 999999987 489999999999887643 7899999999999999777777
Q ss_pred HHHHHHh-CCEEEeeccccchhccCccchhcccCCcCCCc-eeeecccccCC-CCcceEEEEeCchHHHHHhcCCccccc
Q 041829 256 GNIAKSN-GMWFHVDAAYAGSACICPEYRQYIDGVEEADS-FNMNAHKWFLT-NFDCSALWVKDRNTLIQSLSTNPEFLK 332 (486)
Q Consensus 256 ~~ia~~~-g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs-~~~~~hK~l~~-p~~~g~l~~r~~~~~~~~~~~~~~yl~ 332 (486)
-+|.+-- +..++||.||--+.......+ ++.. .-.. +.-...|.++. ..-.|+-++.. ....-..+..++|-.
T Consensus 183 ~KiLe~p~nglVVvDEAYidFsg~~S~~~-lV~k--YpNLivlqTlSKsfGLAGiRvG~~~~~~-~ia~iln~~KaPYNi 258 (375)
T KOG0633|consen 183 LKILEMPDNGLVVVDEAYIDFSGVESRMK-LVKK--YPNLIVLQTLSKSFGLAGIRVGYGAFPL-SIAEILNRAKAPYNI 258 (375)
T ss_pred HHHHhCCCCcEEEEeeeeEeeccccccch-HhHh--CCceeehhhhhhhcCcceeEeecccccH-HHHHHHHhccCCccc
Confidence 7776543 788999999854433111111 1110 0111 11223343331 12223322211 112212233445532
Q ss_pred ccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhC---hhhHHHHHHHHHHHHHHHHHHHhcCCCeE-EecCCCceEEE
Q 041829 333 NKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYG---LENLQGYIRNHIQLAKHFEGLVAQDLRFE-VVTPRIFSLVC 408 (486)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g---~~g~~~~~~~~~~~a~~l~~~l~~~~~~~-~~~~~~~~~v~ 408 (486)
.. ..--++++++. ...++...+...+-+.+|-+.|.++|++. .+.+...|++.
T Consensus 259 S~-----------------------~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFiL 315 (375)
T KOG0633|consen 259 SV-----------------------AGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFIL 315 (375)
T ss_pred cc-----------------------hhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCccccCCCCcccccEEE
Confidence 11 11122333332 23334444445555667778888887765 34456678888
Q ss_pred EEecCCCCCcccchHHHHHHHHHHHccCcEEEEee--eECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 409 FRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT--VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 409 f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+++... .+....++..++...-++++..- ...=++++|++++ |+|+-+-+++.+++.
T Consensus 316 i~v~~~------~n~~akkly~q~at~~gVvVRfrgse~~c~G~lRitvG----t~EentvL~k~~K~~ 374 (375)
T KOG0633|consen 316 IEVTGG------DNGMAKKLYKQDATKMGVVVRFRGSEEGCKGYLRITVG----TPEENTVLMKCLKQF 374 (375)
T ss_pred EEEcCC------CcHHHHHHHHHHHHhcceEEEEcCCccccceeEEEEcC----CcccchHHHHHHHhh
Confidence 887643 24455666666654433554432 2223579999994 456666677766653
No 382
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=98.87 E-value=7.2e-07 Score=87.80 Aligned_cols=188 Identities=17% Similarity=0.091 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe-cCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA-SDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~-s~~~H~s~~~a~~ 193 (486)
.+...+..++|.++++-... ..+|++|||+|+..|+..||....... .. .+..|+. ....|-...-+..
T Consensus 58 ~~~~~~la~~L~~~~p~~~~-------~v~f~~sGseAve~Alkla~~~~~~~~-~~--~r~~il~~~~~yHG~t~~~~s 127 (339)
T PF00202_consen 58 HPEAAELAEKLAELFPGGLD-------RVFFANSGSEAVEAALKLARQYHNKRA-YT--GRRKILAFEGSYHGRTLGALS 127 (339)
T ss_dssp EHHHHHHHHHHHHHSSTTEE-------EEEEESSHHHHHHHHHHHHHHHHHHTH-HH--TTTEEEEETTTB-TSSHHHHH
T ss_pred ccchhhhhhhhhhccccccc-------eeeeccCchHHHHHHHHHhhccccccc-cc--CCceEEEeeeeeeccCccccc
Confidence 34455556668898833222 489999999999999999992211100 00 2334444 4445644333333
Q ss_pred Hh---------CCCCCCeEEEeCCCCCC---CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHH
Q 041829 194 IG---------GIHPQNFRVLKTDSSTN---YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGN 257 (486)
Q Consensus 194 ~~---------g~g~~~v~~v~~~~~~~---~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ 257 (486)
.. +.....+..+|.+.... ..-..+.+++.+.+... ....+|++.-.....|.+.+ +++|.+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~iaavivEPi~g~~G~~~~~~~~l~~l~~ 205 (339)
T PF00202_consen 128 LTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNA--DEIAAVIVEPIQGEGGMIPPPPEYLRELRE 205 (339)
T ss_dssp HSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHG--GGEEEEEEESSBTTTTSBEE-TTHHHHHHH
T ss_pred ccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcC--CcEEEEEEeccccccCccccccchhhehcc
Confidence 21 11112567777652110 00012224444443322 23466777766666676632 799999
Q ss_pred HHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCc
Q 041829 258 IAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDR 317 (486)
Q Consensus 258 ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~ 317 (486)
+|++||+.+++|+.+.|+.-...-+.....++ ..|.+++. |.+....+.|.++++++
T Consensus 206 lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv-~PDiv~~g--K~l~gG~p~sav~~~~~ 262 (339)
T PF00202_consen 206 LCREHGILLIADEVQTGFGRTGKFFASEHYGV-DPDIVTFG--KGLGGGLPISAVLGSEE 262 (339)
T ss_dssp HHHHTT-EEEEEETTTTTTTTSSSSGHHHHTS-SSSEEEEE--GGGGTTSSEEEEEEEHH
T ss_pred cccccccceecccccccccccCCccceecccc-cCcccccc--cchhhhhhcccccccch
Confidence 99999999999999887643322222222334 57999997 99977788999998864
No 383
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.79 E-value=6.5e-06 Score=78.58 Aligned_cols=303 Identities=13% Similarity=0.066 Sum_probs=178.6
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
+...+-+++ ..=+||-+......+.-..+-|.|||-|+-.+..-..... ++..|++|+++..-.....
T Consensus 70 G~~~f~~~~---~~llFG~d~~~l~~~Rv~t~Qt~GGTGAL~~~A~fl~~~~---------~~~~vwis~PtW~NH~~If 137 (396)
T COG1448 70 GLPEFLEAV---QKLLFGADSPALAEDRVATVQTLGGTGALRVAADFLARFF---------PDATVWISDPTWPNHKAIF 137 (396)
T ss_pred CcHHHHHHH---HHHhcCCCcHHHHhhhHhheecCCcchHHHHHHHHHHHhC---------CCceEEeCCCCcHhHHHHH
Confidence 445555552 2334564322111112246778889987766544322221 5667999999977777777
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---CChHHHHHHHHHhCCEEEee
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---DPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---d~l~~I~~ia~~~g~~lhvD 269 (486)
...|+ ++...|.-...+..+|.+.+-+.|++..++ -+++.-.+..||||.- +.-.+|.++.++.|..-.+|
T Consensus 138 ~~aGl---~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~---~vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D 211 (396)
T COG1448 138 EAAGL---EVETYPYYDAETKGLDFDGMLADLKTAPEG---SVVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFD 211 (396)
T ss_pred HhcCC---ceeeeeccccccccccHHHHHHHHHhCCCC---CEEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeee
Confidence 77899 998888754434569999999988775432 2344445568999975 34679999999999999999
Q ss_pred ccccchhccCccchhcccCC--cCC-CceeeecccccCCC--C-cceEEEEeCchHHHHHhcC-----Cccccccccccc
Q 041829 270 AAYAGSACICPEYRQYIDGV--EEA-DSFNMNAHKWFLTN--F-DCSALWVKDRNTLIQSLST-----NPEFLKNKASQA 338 (486)
Q Consensus 270 ~A~g~~~~~~~~~~~~~~~~--~~a-Ds~~~~~hK~l~~p--~-~~g~l~~r~~~~~~~~~~~-----~~~yl~~~~~~~ 338 (486)
-||-|+.--.++-...++-+ ... =.++.+..|.++.- . |+-.++..+.+...+.++. +..|-.+..
T Consensus 212 ~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~--- 288 (396)
T COG1448 212 IAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPA--- 288 (396)
T ss_pred hhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCch---
Confidence 99988664333221111100 111 35677788877532 2 2333334455444443322 222221110
Q ss_pred CCccCCCCCccCCCCCCCcHHHH------HHHHHhChhhHHHHHHHHHHHHHHHHHHHhcC-C--CeEEecCCCceEEEE
Q 041829 339 NMVVDYKDWQIPLGRRFRSLKLW------MVLRLYGLENLQGYIRNHIQLAKHFEGLVAQD-L--RFEVVTPRIFSLVCF 409 (486)
Q Consensus 339 ~~~~~~~~~~~~~sr~~~~l~~~------~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~-~--~~~~~~~~~~~~v~f 409 (486)
...++. -.|+..-..-+..+.++..++++.|.+.|++. + .|..+ ..+.+++++
T Consensus 289 -----------------~Ga~vva~IL~~p~Lra~W~~El~~Mr~Ri~~mR~~lv~~L~~~~~~~~f~~i-~~Q~GMFsy 350 (396)
T COG1448 289 -----------------HGAAVVATILNNPELRAEWEQELEEMRQRILEMRQALVDALKALGAPRNFDFI-ISQRGMFSY 350 (396)
T ss_pred -----------------hhHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccchH-hhcCceeec
Confidence 011111 12343344556778888999999999999882 2 25544 345566665
Q ss_pred EecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 410 RLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 410 ~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
. +-+ .+=..+|.++-.+++... | ||++. ..++..|+.+.++|.++
T Consensus 351 ~--Gls----------~~QV~rLree~~IY~v~s---G----Ri~va--Gl~~~ni~~va~ai~~v 395 (396)
T COG1448 351 T--GLS----------PEQVDRLREEFGIYLVAS---G----RINVA--GLNTSNIDYVAKAIAAV 395 (396)
T ss_pred C--CCC----------HHHHHHHHHhccEEEecC---C----eeeec--cCChhhHHHHHHHHHhh
Confidence 4 211 222345555555665432 1 88883 34788999999998765
No 384
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=98.76 E-value=6.9e-07 Score=86.39 Aligned_cols=149 Identities=18% Similarity=0.138 Sum_probs=99.4
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-----ecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccC
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-----ASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLS 216 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-----~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id 216 (486)
.+++++..+.|.+..+.+... ++-+|+ +. ..|+++...++..|. +++.|-.. + +-.
T Consensus 85 a~~ivnnn~aAVll~~~al~~-----------~~EvVis~g~lV~-gg~~~v~d~~~~aG~---~l~EvG~t--n--~t~ 145 (395)
T COG1921 85 AAAIVNNNAAAVLLTLNALAE-----------GKEVVVSRGELVE-GGAFRVPDIIRLAGA---KLVEVGTT--N--RTH 145 (395)
T ss_pred heeeECCcHHHHHHHHhhhcc-----------CCeEEEEcccccc-CCCCChhHHHHHcCC---EEEEeccc--C--cCC
Confidence 378888777666655543322 111121 23 579999999999999 77776543 2 679
Q ss_pred HHHHHHHHHHHHhCCCccEEEEEecCCcccccc--CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCc
Q 041829 217 PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADS 294 (486)
Q Consensus 217 ~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs 294 (486)
..+++.+|.+.++ ++.-++.++. |.. -+++++++|||++|+.++||.|-|...-.-+..+..++ .++|.
T Consensus 146 ~~d~~~AIne~ta------~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la--~GaDL 216 (395)
T COG1921 146 LKDYELAINENTA------LLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALA--LGADL 216 (395)
T ss_pred HHHHHHHhccCCe------eEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHh--cCCCE
Confidence 9999999988765 3333333322 444 36788999999999999999987654221122222221 27999
Q ss_pred eeeecccccCCCCcceEEEEeCchHH
Q 041829 295 FNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 295 ~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
+++|++|.+++|. .|+++-| ++.+
T Consensus 217 V~~SgdKllgGPq-aGii~Gk-KelI 240 (395)
T COG1921 217 VSFSGDKLLGGPQ-AGIIVGK-KELI 240 (395)
T ss_pred EEEecchhcCCCc-cceEech-HHHH
Confidence 9999999999996 5665544 4444
No 385
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=98.66 E-value=7.1e-06 Score=78.53 Aligned_cols=301 Identities=14% Similarity=0.134 Sum_probs=152.4
Q ss_pred HHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHh----CccCCCCeEEEecCCCchhHHHHHHHhCCC
Q 041829 123 DWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRV----GKNSLEKLVVYASDQTHSALQKACQIGGIH 198 (486)
Q Consensus 123 ~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~----~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g 198 (486)
+.+++++|.+.+ +.++.+++| -|++--..++...+... .+...++...+|+.+.+......++.+|+
T Consensus 76 ~l~a~llgv~~~-------~viv~gNSS-L~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHFai~E~~Gi- 146 (425)
T PF12897_consen 76 ELFAELLGVPPE-------NVIVGGNSS-LNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHFAITEHFGI- 146 (425)
T ss_dssp HHHHHHHTS-GG-------GEEE-SS-H-HHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHHHHHHHCT--
T ss_pred HHHHHHhCCCHH-------HEEEeccch-HHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHHHHHHhhCc-
Confidence 349999999986 344444444 34333333333322221 12223677899999999999999999999
Q ss_pred CCCeEEEeCCCCCCCccCHHHHHHHHHHHHh-CCCccEEEEEecCCccccccCChHHHHHHH----HHhCCEEEeecccc
Q 041829 199 PQNFRVLKTDSSTNYSLSPDSLAEAISRDLT-IGLIPFFLCATVGTTSSTAVDPLLALGNIA----KSNGMWFHVDAAYA 273 (486)
Q Consensus 199 ~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~-~g~~p~~vv~~~~~t~tG~id~l~~I~~ia----~~~g~~lhvD~A~g 273 (486)
+.+.||.+++ ..|+|.+|+.+.++.. +| +-++-.-+|++|..-.=+-+.++| ...++.+..|-||+
T Consensus 147 --emi~VpM~~d---GPDmD~Ve~LV~~D~svKG----iWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~ 217 (425)
T PF12897_consen 147 --EMIPVPMTED---GPDMDMVEELVAEDPSVKG----IWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYA 217 (425)
T ss_dssp --EEEEEEEETT---EE-HHHHHHHTHTSTTEEE----EEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTT
T ss_pred --EEEecCCCCC---CCCHHHHHHHHhcCCccce----EEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCce
Confidence 9999999876 5899999999976643 22 344445689999995544444444 45689999999998
Q ss_pred chhccCccch----hcccC---CcCCC--ceeeecccccCCCCcceEEEEeCch--HHHHHhcCCcccccccccccCCcc
Q 041829 274 GSACICPEYR----QYIDG---VEEAD--SFNMNAHKWFLTNFDCSALWVKDRN--TLIQSLSTNPEFLKNKASQANMVV 342 (486)
Q Consensus 274 ~~~~~~~~~~----~~~~~---~~~aD--s~~~~~hK~l~~p~~~g~l~~r~~~--~~~~~~~~~~~yl~~~~~~~~~~~ 342 (486)
...+..+..+ ..+.. ...-| .+..+..|.-+...|.+++...... .+.+.+.. .-+.
T Consensus 218 vHhL~~~~~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaGva~~aaS~~Nl~~~~~~~~~--~tIg---------- 285 (425)
T PF12897_consen 218 VHHLYDEEPRDALLNILDACAKAGNPDRVYVFASTSKITFPGAGVAFFAASEANLAWIKKHLSV--QTIG---------- 285 (425)
T ss_dssp T-BSSSSSS------HHHHHHHTT-TTSEEEEEESTTTS-TTSS-EEEEE-HHHHHHHHHHHHH--H-S-----------
T ss_pred EeeccccccchhhhHHHHHHHHcCCCCeEEEEecccccccCCcceeeeecCHHHHHHHHHHhcC--ceeC----------
Confidence 8776322111 11111 11233 4456678877766666766654432 11111110 0000
Q ss_pred CCCCCccCCCCCCCcHHHHHHHHHhC-hh-hHHHHHHHHHH--------HHHHHHHHHh-cCCCeEEecCCC-ceEEEEE
Q 041829 343 DYKDWQIPLGRRFRSLKLWMVLRLYG-LE-NLQGYIRNHIQ--------LAKHFEGLVA-QDLRFEVVTPRI-FSLVCFR 410 (486)
Q Consensus 343 ~~~~~~~~~sr~~~~l~~~~~l~~~g-~~-g~~~~~~~~~~--------~a~~l~~~l~-~~~~~~~~~~~~-~~~v~f~ 410 (486)
..-+......+.++ .+ |+++..+++.+ .-+.|.+.|. .. ++--++.|. ..+|+|.
T Consensus 286 ------------pdKvNQLRHvrff~d~~gGv~aHM~kHa~il~PKF~~V~~~L~~~L~~~~-~ia~Wt~P~GGYFIsld 352 (425)
T PF12897_consen 286 ------------PDKVNQLRHVRFFKDAEGGVRAHMRKHAAILRPKFEAVLEILEEELGDGL-GIASWTKPKGGYFISLD 352 (425)
T ss_dssp --------------HHHHHHHHHHHHSHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGTGG-TSEEE---SBSS-EEEE
T ss_pred ------------ccHHHHHHHHHHhcChhhHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCCC-CeeEecCCCCceEEEEe
Confidence 01111222233332 34 66666655543 2344555565 33 444455554 4577888
Q ss_pred ecCCCCCcccchHHHHHHHHHHHccCcEEEEee--eEC-----CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 411 LLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT--VLS-----GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~--~~~-----~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
..+ .-..++.+...+.| +.+++. .+. ....|||+... -+.+|++..++.+.-+.+-
T Consensus 353 ~~~---------G~AkrvV~lakeAG-V~LT~AGAtfPyg~DP~D~nIRiAPS~--P~leel~~Am~~~~~cv~l 415 (425)
T PF12897_consen 353 VLD---------GTAKRVVELAKEAG-VALTPAGATFPYGKDPRDSNIRIAPSY--PSLEELETAMDVFATCVKL 415 (425)
T ss_dssp EST---------T-HHHHHHHHHHTT-EE---TTTTSGGG--TTS-EEEE--SS--S-HHHHHHHHHHHHHHHHH
T ss_pred cCC---------ChHHHHHHHHHHhC-ceeCCCCCCCCCCCCCCCCcEEecCCC--CCHHHHHHHHHHHHHHHHH
Confidence 754 23366777666777 555542 221 13589999844 4899999999999877653
No 386
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=98.64 E-value=6e-07 Score=80.70 Aligned_cols=231 Identities=15% Similarity=0.109 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchh-HHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTAS-EAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt-~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...+-.+.....-.+.|+..- .+.++++-+| ++.-.++...|.+. ++ .+ -|+-..-...|-.|..
T Consensus 55 l~~isne~a~~~i~l~glhav------~nc~vvpl~tgmslslc~~s~r~kr-pk------ak-yiiw~ridqks~~ksi 120 (432)
T KOG3843|consen 55 LACISNEFAKDAIHLAGLHAV------ANCFVVPLATGMSLSLCFLSLRHKR-PK------AK-YIIWLRIDQKSCFKSI 120 (432)
T ss_pred HHHHHHHHHHHHHHHhhhhhh------hceeEEeccccccHHHHHHHHhhcC-Cc------cc-EEEEEecchHHHHHHH
Confidence 344444555556677777542 1234433222 44445555555431 11 12 3344566677878888
Q ss_pred HHhCCCCCCeEEEeCC-CCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc---ccCChHHHHHHHHHhCCEEEe
Q 041829 193 QIGGIHPQNFRVLKTD-SSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST---AVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~-~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG---~id~l~~I~~ia~~~g~~lhv 268 (486)
--.|. +.+.|..- +.+....|++++++.+++.- |-+|...+.+|..- .-|.+++|+.||..|++.-+|
T Consensus 121 ~~agf---epiiie~i~d~d~l~tdleav~~~iee~g-----~dcilci~sttscfapr~pd~leaiaaica~~diphiv 192 (432)
T KOG3843|consen 121 IHAGF---EPIIIENILDGDELITDLEAVEAIIEELG-----EDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIV 192 (432)
T ss_pred HhcCC---CceeeeccccchHHHHhHHHHHHHHHHhC-----CceEEEEeecccccCCCCCchHHHHHHHHHccCchhhh
Confidence 88888 77766533 33336779999999988753 23455444444332 238899999999999999999
Q ss_pred eccccchhccCccchhcc---cCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCC
Q 041829 269 DAAYAGSACICPEYRQYI---DGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYK 345 (486)
Q Consensus 269 D~A~g~~~~~~~~~~~~~---~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~ 345 (486)
..|||.-.- +--+++ ....++|.++.+.-|-+.+|.|..++..-+...++..- ..|-
T Consensus 193 nnayglqse---e~i~~iaa~~~~grida~vqsldknf~vpvggaiia~fk~n~iq~ia---k~yp-------------- 252 (432)
T KOG3843|consen 193 NNAYGLQSE---ECIHKIAAAAECGRIDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIA---KMYP-------------- 252 (432)
T ss_pred ccccccchH---HHHHHHHHHhhhccHHHHHHHhhhcceeecchhHhhHhHHHHHHHHH---HhCC--------------
Confidence 999975321 111111 12447899999999999999876555432222222111 1121
Q ss_pred CCccCCCCC--CCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhc
Q 041829 346 DWQIPLGRR--FRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQ 392 (486)
Q Consensus 346 ~~~~~~sr~--~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~ 392 (486)
||. ...+-+..++...|..+|.+...+..++-.+++..|.+
T Consensus 253 ------grasa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~ki~~ 295 (432)
T KOG3843|consen 253 ------GRASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNKIIK 295 (432)
T ss_pred ------CccccCccHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111 23456778888899999999999988888888777754
No 387
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=98.47 E-value=0.0002 Score=68.39 Aligned_cols=252 Identities=13% Similarity=0.133 Sum_probs=134.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEE---cCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE-ecCCCchhH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVI---QGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY-ASDQTHSAL 188 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~---t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~-~s~~~H~s~ 188 (486)
+-..+|+. .|+.||.++. ++ ..+||.|+-.+|..... +++.++ +....+.++
T Consensus 55 GRd~le~i----yA~vfgaE~A---------LVRpq~vSGTHAi~~~Lfg~Lr-----------pGD~ll~~tG~PYDTL 110 (403)
T PF06838_consen 55 GRDKLERI----YADVFGAEDA---------LVRPQFVSGTHAIALALFGVLR-----------PGDELLSITGKPYDTL 110 (403)
T ss_dssp HHHHHHHH----HHHHCT-SEE---------EEETTS-SHHHHHHHHHHHH-------------TT-EEEESSSS--CCH
T ss_pred cHHHHHHH----HHHHhCchhh---------hhcccccchHHHHHHHHHhcCC-----------CCCeEEEcCCCchhhH
Confidence 44566666 8999998763 22 13589888888876554 666554 566667778
Q ss_pred HHHHHHh----------CCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEec--CC--ccccccCChHH
Q 041829 189 QKACQIG----------GIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATV--GT--TSSTAVDPLLA 254 (486)
Q Consensus 189 ~~a~~~~----------g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~--~~--t~tG~id~l~~ 254 (486)
.+..-+. |+ +...||+.+++ .+|.+.+++++++.++ +|...- |. -++=.+++|++
T Consensus 111 ~~VIG~~g~~~GSL~e~Gi---~Y~~v~L~~dg--~~D~~~i~~~~~~~tk------~v~IQRSrGYs~R~sl~i~~I~~ 179 (403)
T PF06838_consen 111 EEVIGIRGNGPGSLKEFGI---KYREVPLTEDG--TIDWEAIKKALKPNTK------MVLIQRSRGYSWRPSLTIEEIKE 179 (403)
T ss_dssp HHHHTSSSSSSSSTGGGT----EEEE--B-TTS--SB-HHHHHHHHHTTEE------EEEEE-S-TTSSS----HHHHHH
T ss_pred HHHhCCCCCCCCChHHhCc---eeEEEeecCCC--CcCHHHHHHhhccCce------EEEEecCCCCCCCCCCCHHHHHH
Confidence 7776443 45 67788888754 9999999999986543 444432 21 12234477888
Q ss_pred HHHHHHHh--CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCC-CcceEEEEeCchHHHHH-hcCCccc
Q 041829 255 LGNIAKSN--GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTN-FDCSALWVKDRNTLIQS-LSTNPEF 330 (486)
Q Consensus 255 I~~ia~~~--g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p-~~~g~l~~r~~~~~~~~-~~~~~~y 330 (486)
+.+.+|+. ++++.||-|||-+.-... ..+. +||.+..+.-|-.++. ..+|..++.+++.+.++ .+..++-
T Consensus 180 ~i~~vk~~~p~~iifVDNCYGEFvE~~E-P~~v-----GADl~aGSLIKNpGGgiAptGGYIaGr~~lVe~~a~RLTaPG 253 (403)
T PF06838_consen 180 IIKFVKEINPDVIIFVDNCYGEFVETQE-PTEV-----GADLMAGSLIKNPGGGIAPTGGYIAGRKDLVERAAYRLTAPG 253 (403)
T ss_dssp HHHHHHHH-TTSEEEEE-TTTTTTSSS--GGGG-----T-SEEEEETTSGGGTTT-SS-EEEEESHHHHHHHHHHHS-TT
T ss_pred HHHHHHhhCCCeEEEEeCCcceeccccC-cccc-----chhheeccceeCCCCCccCcCCEEechHHHHHHHHhhhcCCc
Confidence 88888876 689999999987653322 2222 8999999999987543 33566666665544332 2223333
Q ss_pred ccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCeEEecC---CCceEE
Q 041829 331 LKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRFEVVTP---RIFSLV 407 (486)
Q Consensus 331 l~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~~---~~~~~v 407 (486)
+.. ++|-.+....... + |.=--...+.+..+-|-.....++++ |+++... +..-+|
T Consensus 254 iG~----------------e~G~t~~~~R~~~--Q--GlFlAP~vV~eAlKgaif~A~~fe~l-G~~v~P~~~~~R~DiI 312 (403)
T PF06838_consen 254 IGK----------------EVGATLGTNRLMF--Q--GLFLAPHVVGEALKGAIFAAALFEKL-GFEVSPKPDDPRSDII 312 (403)
T ss_dssp TGG----------------GSS--TTTHHHHH--H--HHHHHHHHHHHHHHHHHHHHHHHHHT-T-EEES-TTS--SSS-
T ss_pred ccc----------------ccccCcchHHHHH--h--HHhhchHHHHHHHHHHHHHHHHHHHc-CCcCCCCCCCCCCceE
Confidence 322 2332222221110 0 11111344555566666667777777 9998753 333333
Q ss_pred -EEEecCCCCCcccchHHHHHHHHHHHc
Q 041829 408 -CFRLLPPHNDEDHGNKLNHKLLDDINS 434 (486)
Q Consensus 408 -~f~~~~~~~~~~~~~~~~~~l~~~l~~ 434 (486)
++.+.. .+...++++.+.+
T Consensus 313 Qai~l~~--------~e~l~~FC~~iQ~ 332 (403)
T PF06838_consen 313 QAIELGS--------PEKLIAFCQGIQA 332 (403)
T ss_dssp EEEE-SS--------HHHHHHHHHHHHH
T ss_pred EEEECCC--------HHHHHHHHHHHHh
Confidence 556542 3334566666654
No 388
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=98.38 E-value=3.6e-07 Score=87.58 Aligned_cols=161 Identities=16% Similarity=0.115 Sum_probs=37.5
Q ss_pred HHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC------chhHHHHHHH
Q 041829 121 VLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT------HSALQKACQI 194 (486)
Q Consensus 121 ~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~------H~s~~~a~~~ 194 (486)
+.+.+++++|..+ ++++++...|.+.++.+... +-.|++|... .+.+....+.
T Consensus 52 v~~ll~~ltgAea---------A~VvNnnaAAv~L~l~~la~------------~~EvIvsRGelVeiGgsFRip~vm~~ 110 (367)
T PF03841_consen 52 VEELLCELTGAEA---------ALVVNNNAAAVLLALNTLAK------------GKEVIVSRGELVEIGGSFRIPDVMRQ 110 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccc---------cccccccccccccccccccc------------cccccccccccccccccccccccccc
Confidence 4445899999875 57777666666665543221 1134445433 2335567777
Q ss_pred hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc--cccc--CChHHHHHHHHHhCCEEEeec
Q 041829 195 GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS--STAV--DPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~--tG~i--d~l~~I~~ia~~~g~~lhvD~ 270 (486)
.|. .++.|-+.. +..+++.+++|.+++. ++.-.+.+|. .|.. -+++++++++++|++++++|.
T Consensus 111 sGa---~lvEVGttN----~t~~~Dye~AI~e~Ta------~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~Dl 177 (367)
T PF03841_consen 111 SGA---RLVEVGTTN----RTHLSDYEKAITENTA------ALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDL 177 (367)
T ss_dssp ---------------------------------------------------------------HHHHHHHHHT--EEEE-
T ss_pred ccc---ccccccccc----cccccccccccccccc------ccccccccccccccccccccHHHHHHHHhhcCCcEEEEC
Confidence 788 888776542 6688999999999875 3444444443 2323 379999999999999999998
Q ss_pred cccchhcc----CccchhcccCC-cCCCceeeecccccCCCCcceEEEEeC
Q 041829 271 AYAGSACI----CPEYRQYIDGV-EEADSFNMNAHKWFLTNFDCSALWVKD 316 (486)
Q Consensus 271 A~g~~~~~----~~~~~~~~~~~-~~aDs~~~~~hK~l~~p~~~g~l~~r~ 316 (486)
+-|...-+ .+.-......+ .++|.++|++-|.+++|. +|+++-|.
T Consensus 178 gsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV~fSGdKlLGGPQ-aGiI~Gkk 227 (367)
T PF03841_consen 178 GSGLLVDLSPYGLPDEPTVQEYLAAGADLVTFSGDKLLGGPQ-AGIIVGKK 227 (367)
T ss_dssp TTHHHHHHHTT----------CCCCT-SEEEEETTSSSSS-S--EEEEEEH
T ss_pred CCCCCcCcccccCccccHHHHHhhcCCCEEEEECCCcCCCCC-eEEEEeCH
Confidence 77553311 11101111112 379999999999999996 67776664
No 389
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=98.30 E-value=0.00025 Score=64.92 Aligned_cols=335 Identities=15% Similarity=0.085 Sum_probs=191.0
Q ss_pred HHHHHHHHHHHhcCcCcccc---c---cChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHH
Q 041829 89 VAGFLGEMLSAGLNIVGFSW---I---TSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARD 162 (486)
Q Consensus 89 ~~~~~~~~l~~~~n~~~~~~---~---~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~ 162 (486)
+-+++-++-...+|-++... + .+..+..+-..+...+++|++.|+.+. -.++.+|||.. +.|+..-..
T Consensus 19 p~~VL~e~qkdl~n~~g~GisV~EmSHRsk~f~kii~~tes~lreLlniPdn~~-----vlf~QGGGt~q-FaAv~lNL~ 92 (370)
T KOG2790|consen 19 PESVLLEAQKDLLNFNGSGISVMEMSHRSKDFAKIINDTESLLRELLNIPDNYK-----VLFLQGGGTGQ-FAAVPLNLI 92 (370)
T ss_pred CHHHHHHHHHHhhccCCCcceEEEecccchhHHHHHHHHHHHHHHHHcCCCcee-----EEEEeCCCccc-ccccchhhh
Confidence 34566666666666443221 1 344566677777888999999999753 35666777743 222211000
Q ss_pred HHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCC-ccCHHHHHHHHHHHHhCCCccEEEEEec
Q 041829 163 KALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNY-SLSPDSLAEAISRDLTIGLIPFFLCATV 241 (486)
Q Consensus 163 ~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~-~id~~~L~~~i~~~~~~g~~p~~vv~~~ 241 (486)
. ...|..-+-|++..-.-.+..++-++.-. +.+..+..+...+ ..|.+.++...+. .+|..+.
T Consensus 93 g-----lK~g~~AdYiVTGsWS~KA~~EAkk~~~~---~~V~~~~k~y~ygkvPd~~~w~~~~da--------~yvyyCa 156 (370)
T KOG2790|consen 93 G-----LKHGRCADYVVTGSWSAKAAEEAKKYGTP---NIVIPKLKSYTYGKVPDPSTWELNPDA--------SYVYYCA 156 (370)
T ss_pred c-----cccCCccceEEeccccHHHHHHHHhhCCc---eEEeccccccccCcCCChhhcccCCCc--------cEEEEec
Confidence 0 01222334566665555666666665444 5555555432211 2466665543221 2788899
Q ss_pred CCcccccc-CChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCceeeecccccCCCCcceEEEEeCchHH
Q 041829 242 GTTSSTAV-DPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTL 320 (486)
Q Consensus 242 ~~t~tG~i-d~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~ 320 (486)
..|..|+- +++. +-.-.|..++.|-+.-. ++... .....+.+...++|..+ |.|..++++|+. .+
T Consensus 157 NETVHGVEf~~~P----~~~~~~~vlVaDmSSnf---lSrpv-----Dvsk~gvi~aGAQKN~G-~aG~Tvvivr~d-ll 222 (370)
T KOG2790|consen 157 NETVHGVEFDFIP----VNDPKGAVLVADMSSNF---LSRPV-----DVSKFGVIFAGAQKNVG-PAGVTVVIVRKD-LL 222 (370)
T ss_pred CceeeceecCCCC----CCCCCCceEEEecccch---hcCCc-----cchhcceEEeccccccC-ccccEEEEEehh-hh
Confidence 99999976 3343 22345788888865322 11111 13366788899999987 667888888874 23
Q ss_pred HHHhcCCccccccc-ccccCCccCCCCCccCCCCCCCcHHHHHHHHHh-ChhhHHHHHHHHHHHHHHHHHHHhcCCCeEE
Q 041829 321 IQSLSTNPEFLKNK-ASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLY-GLENLQGYIRNHIQLAKHFEGLVAQDLRFEV 398 (486)
Q Consensus 321 ~~~~~~~~~yl~~~-~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~-g~~g~~~~~~~~~~~a~~l~~~l~~~~~~~~ 398 (486)
.......|.-+.-. .......++ ++++ |.....-+.++.+ ..-|++.+.+...+.++.+++.|.+..||-.
T Consensus 223 g~~~~~tP~v~dyk~~~~NnSlyN----TpP~---f~iy~~~Lv~~~il~~GGl~a~e~~n~~KskllYd~iD~s~gfy~ 295 (370)
T KOG2790|consen 223 GNALDITPSVLDYKIMDKNNSLYN----TPPC---FGIYVMGLVFEWILEKGGLAAMEKLNQEKSKLLYDAIDNSNGFYR 295 (370)
T ss_pred cccccCCccccceeeecccccccc----CCCe---eeeeehhhHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 33333333222110 000000111 1111 2222223334433 2346777778888999999999999888765
Q ss_pred e-cCCC---ceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHH
Q 041829 399 V-TPRI---FSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQD 474 (486)
Q Consensus 399 ~-~~~~---~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~ 474 (486)
. .+|. .-.|+||+.+ +++..++++.-.+++-+.+-+. ...+.+|.|+ .-..+-+++.++++-+++
T Consensus 296 cpVe~~~RS~MNV~Fri~~--------d~Le~eFLkeA~~~~mv~LKGh--RSVGGiRASl-YNAisv~~~q~L~~~m~~ 364 (370)
T KOG2790|consen 296 CPVEPSVRSRMNVPFRIEK--------DELEAEFLKEAAKEHMVQLKGH--RSVGGIRASL-YNAISVEEVQKLAAFMKE 364 (370)
T ss_pred cccchhhhhhcccceeecc--------hHHHHHHHHHHHHhhhhccccc--cccccchhhh-hccccHHHHHHHHHHHHH
Confidence 3 2332 2367899874 4555667766655553333222 2235799998 667899999999998887
Q ss_pred HHH
Q 041829 475 KAS 477 (486)
Q Consensus 475 ~~~ 477 (486)
..+
T Consensus 365 F~k 367 (370)
T KOG2790|consen 365 FQK 367 (370)
T ss_pred HHH
Confidence 654
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.22 E-value=0.00036 Score=64.32 Aligned_cols=302 Identities=15% Similarity=0.122 Sum_probs=166.5
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHh------CCCCCC---eEEEeCCC--C
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIG------GIHPQN---FRVLKTDS--S 210 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~------g~g~~~---v~~v~~~~--~ 210 (486)
..+|+++|||||-+||+.||+... ..++|.+.-..|-.+....++. |-+..+ |..-|+.. .
T Consensus 104 vc~F~NSGSEANDLALRLAR~ftk--------hqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyr 175 (452)
T KOG1403|consen 104 VCFFVNSGSEANDLALRLARNFTK--------HQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYR 175 (452)
T ss_pred EEEEecCCchhhHHHHHHHHhhcc--------cCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCccccc
Confidence 479999999999999999998521 4556655544443333322221 222222 33334321 1
Q ss_pred CCCc-----------cCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccch
Q 041829 211 TNYS-----------LSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 211 ~~~~-----------id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~ 275 (486)
+.|+ .-.+.+++.+.+...+|......++.+-.+-.|.|-| ++++++..|.+|-.++.|..+-|+
T Consensus 176 GK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQvGF 255 (452)
T KOG1403|consen 176 GKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQVGF 255 (452)
T ss_pred cccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehhhhcc
Confidence 1122 2346677777777666655544455554555666644 688999999999999999988776
Q ss_pred hccCccc-hhcccCCcCCCceeeecccccCCCCcceEEEEeCchHHHHHhcC-CcccccccccccCCccCCCCCccCCCC
Q 041829 276 ACICPEY-RQYIDGVEEADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLST-NPEFLKNKASQANMVVDYKDWQIPLGR 353 (486)
Q Consensus 276 ~~~~~~~-~~~~~~~~~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~-~~~yl~~~~~~~~~~~~~~~~~~~~sr 353 (486)
.-....+ ....-+. --|++++. |-++-..+.+++..+.+ +.++|.. ...|+... +|.
T Consensus 256 GRvG~hyWafq~y~f-iPDIVtmg--KpmGNGhPVa~Vattke--IA~Af~atgv~YFNTy----------------GGn 314 (452)
T KOG1403|consen 256 GRVGSHYWAFQTYNF-IPDIVTMG--KPMGNGHPVAAVATTKE--IAQAFHATGVEYFNTY----------------GGN 314 (452)
T ss_pred cccchhhhhhhhhcc-ccchheec--ccCCCCCeeeEEeccHH--HHHHhccccceehhcc----------------CCC
Confidence 5433221 1111111 24676653 43433334555555542 4455554 44565322 233
Q ss_pred CCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCC-CeEEecCCCc--eEEEEEecCCCCCcccchHHHHHHHH
Q 041829 354 RFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDL-RFEVVTPRIF--SLVCFRLLPPHNDEDHGNKLNHKLLD 430 (486)
Q Consensus 354 ~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~-~~~~~~~~~~--~~v~f~~~~~~~~~~~~~~~~~~l~~ 430 (486)
+.......+.|+....+. +.++..++.++|...|++.. ..+++.+... -++-+.+..+.....-..+....+..
T Consensus 315 PVsCAv~laVm~v~e~E~---Lq~ha~~vG~~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~ 391 (452)
T KOG1403|consen 315 PVSCAVGLAVMRVCEDEN---LQEHAQQVGEKLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVN 391 (452)
T ss_pred chhHHHHHHHHHHHhhhh---HHHHHHHHHHHHHHHHHHHhhhccceeccccceEEEeeeeecccccCCCcHHHHHHHHH
Confidence 333334445566555444 44566667777777776532 3556654331 12233332211111112334466777
Q ss_pred HHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 431 DINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 431 ~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+|.+..++.++.... +++.+.|-. --..+++++++++..|.+++.
T Consensus 392 rlke~y~VLlsaDGP-h~NilKiKP-PmCFneena~e~v~~ld~iLT 436 (452)
T KOG1403|consen 392 RLKELYRVLLSADGP-HRNILKIKP-PMCFNEENADEFVLGLDEILT 436 (452)
T ss_pred HHHHhhhEEEecCCC-CCceeecCC-CcccChhhHHHHHHHHHHHHH
Confidence 888777676664322 245777654 223478889999888888765
No 391
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=97.45 E-value=0.012 Score=55.96 Aligned_cols=221 Identities=12% Similarity=0.095 Sum_probs=122.5
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCcccc----ccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCC-c
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSST----AVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGV-E 290 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG----~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~-~ 290 (486)
.++.+|+.|.+..++......+++.--.+.-| .-+=+..+.+||++||+-++||..+-|+..-..-|.+---.+ .
T Consensus 254 Cl~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~ 333 (484)
T KOG1405|consen 254 CLAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDS 333 (484)
T ss_pred HHHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCC
Confidence 56778888887765544445555554344444 335589999999999999999998876543322222211122 2
Q ss_pred CCCceeeecccccCCCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChh
Q 041829 291 EADSFNMNAHKWFLTNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLE 370 (486)
Q Consensus 291 ~aDs~~~~~hK~l~~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~ 370 (486)
-.|.++++ -|+.. .| ++.+.+ |.-..+| +.+..-+|-+...+-+-.+.+.+..+
T Consensus 334 PpD~vTFS-KK~q~----gG--ffh~~~-----frpn~pY--------------rifNTWmGdP~k~lll~~vv~~I~~~ 387 (484)
T KOG1405|consen 334 PPDVVTFS-KKFQT----GG--FFHDEE-----FRPNEPY--------------RIFNTWMGDPSKNLLLEEVVQEIKRE 387 (484)
T ss_pred Cccceehh-hhhhc----Cc--cccCcc-----cCCCchH--------------HHhhhhcCChHHHHHHHHHHHHHhHH
Confidence 46777765 23221 12 122221 1112222 11112234444444444555554444
Q ss_pred hHHHHHHHHHHHHHHHHHHHhc----CCCeEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC
Q 041829 371 NLQGYIRNHIQLAKHFEGLVAQ----DLRFEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS 446 (486)
Q Consensus 371 g~~~~~~~~~~~a~~l~~~l~~----~~~~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~ 446 (486)
.+++++....++|...|.+ .|+.---......+++|.+.. .....+++..+...| +.+++..
T Consensus 388 ---~Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps--------~~~Rdk~i~~~~~nG-v~~GGCg-- 453 (484)
T KOG1405|consen 388 ---DLLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPS--------GSIRDKLILIARLNG-VNLGGCG-- 453 (484)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHHHhCchhhhcccccceEEEEeCCC--------hHHHHHHHHHHHHcC-ceecccc--
Confidence 4555666677777777754 343311112344566666642 455567777777777 3444332
Q ss_pred CEeEEEEEecCCCCCHHHHHHHHHHHHHHHHH
Q 041829 447 GKYILRFAVGAPLTEWRHVNAAWEVMQDKASA 478 (486)
Q Consensus 447 ~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~ 478 (486)
...+|+-. +...++.+.+-+++.+.++.+.
T Consensus 454 -~~siRfRP-sLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 454 -DKSIRFRP-SLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred -cceeeecc-ceeehhhhHHHHHHHHHHHhcc
Confidence 23566654 4455888899999999887653
No 392
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=97.19 E-value=0.0091 Score=55.43 Aligned_cols=152 Identities=15% Similarity=0.154 Sum_probs=97.1
Q ss_pred HHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCe-EEEecCCCchhHHHHHH
Q 041829 115 TELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKL-VVYASDQTHSALQKACQ 193 (486)
Q Consensus 115 ~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~-~v~~s~~~H~s~~~a~~ 193 (486)
.-||+. .++.||.+.... .--|. +||.|+-.||-.... |++ .+++....+....+..-
T Consensus 68 dtLe~v----yA~vf~aE~a~V-----Rpq~i-sGTHAI~~aLfg~LR-----------pgDell~i~G~PYDTLeevIG 126 (416)
T COG4100 68 DTLERV----YAQVFGAEAALV-----RPQII-SGTHAIACALFGILR-----------PGDELLYITGSPYDTLEEVIG 126 (416)
T ss_pred hHHHHH----HHHHhcccccee-----eeeee-cchhHHHHHHHhccC-----------CCCeEEEecCCcchhHHHHhc
Confidence 346665 889999876421 12233 468777776654332 444 45566666667666544
Q ss_pred H----------hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEec--C--CccccccCChHHHHHHH
Q 041829 194 I----------GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATV--G--TTSSTAVDPLLALGNIA 259 (486)
Q Consensus 194 ~----------~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~--~--~t~tG~id~l~~I~~ia 259 (486)
+ +|+ .-..||+..++ .+|.+.+++++++.++ +|...- | .-+.=.|++|+++..+.
T Consensus 127 ~rg~~~gSL~dfgi---~Y~~v~Lt~~g--kiD~~~v~~~i~~~tk------li~IQRS~GY~~RpS~~I~eI~~~i~~v 195 (416)
T COG4100 127 LRGEGQGSLKDFGI---KYKAVPLTADG--KIDIQAVKTAISDRTK------LIGIQRSKGYAWRPSLSIAEIEEMITFV 195 (416)
T ss_pred cCCCCcccHHHhCc---ceeecccccCC--cccHHHHHHhcCccce------EEEEEeccCcCCCCcccHHHHHHHHHHH
Confidence 3 344 55678887654 9999999999998765 333221 1 22344567788888888
Q ss_pred HHh--CCEEEeeccccchhccCccchhcccCCcCCCceeeecccccC
Q 041829 260 KSN--GMWFHVDAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFL 304 (486)
Q Consensus 260 ~~~--g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~ 304 (486)
|+. ++.+.||-|||-+.--. +..+. ++|.+..+.-|.-+
T Consensus 196 k~inpn~ivFVDNCYGEFvE~~-EPt~v-----GaDliAGSLIKNpG 236 (416)
T COG4100 196 KEINPNVIVFVDNCYGEFVEEK-EPTHV-----GADLIAGSLIKNPG 236 (416)
T ss_pred HhcCCCEEEEEeccchhhhhcc-Ccccc-----chhhhccceeeCCC
Confidence 876 68899999998765321 11111 78999888877643
No 393
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=97.08 E-value=0.069 Score=50.06 Aligned_cols=289 Identities=13% Similarity=0.140 Sum_probs=156.4
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHH
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLA 221 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~ 221 (486)
.|+-+-|||-|+..+..-.-... ++..||+|.++.......+...|.- .+...|.=..++-.+|.+.+-
T Consensus 101 ~~vQslsGTGAl~~~A~Fl~~~~---------~~~~VY~SnPTW~nH~~if~~aGf~--tv~~Y~yWd~~~k~~d~e~~L 169 (410)
T KOG1412|consen 101 FGVQSLSGTGALRIAADFLATFY---------NKNTVYVSNPTWENHHAIFEKAGFT--TVATYPYWDAENKCVDLEGFL 169 (410)
T ss_pred cceeeccccchhhhhHHHHHHhc---------ccceeEecCCchhHHHHHHHHcCCc--eeeeeeeecCCCceecHHHHH
Confidence 46777788877766543221111 4556999999977777777777841 333444322233478999988
Q ss_pred HHHHHHHhCCCccEEEEEecCCccccccCC----hHHHHHHHHHhCCEEEeeccccchhccCcc---c--hhcc-cCCcC
Q 041829 222 EAISRDLTIGLIPFFLCATVGTTSSTAVDP----LLALGNIAKSNGMWFHVDAAYAGSACICPE---Y--RQYI-DGVEE 291 (486)
Q Consensus 222 ~~i~~~~~~g~~p~~vv~~~~~t~tG~id~----l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~---~--~~~~-~~~~~ 291 (486)
..|+...+. -++|.-.+..|+||. || -.+|+++.++.+..-..|-||-|++---+. + +..+ .|++
T Consensus 170 sdl~~APe~---si~iLhaCAhNPTGm-DPT~EQW~qia~vik~k~lf~fFDiAYQGfASGD~~~DawAiR~fV~~g~e- 244 (410)
T KOG1412|consen 170 SDLESAPEG---SIIILHACAHNPTGM-DPTREQWKQIADVIKSKNLFPFFDIAYQGFASGDLDADAWAIRYFVEQGFE- 244 (410)
T ss_pred HHHhhCCCC---cEEeeeccccCCCCC-CCCHHHHHHHHHHHHhcCceeeeehhhcccccCCccccHHHHHHHHhcCCe-
Confidence 888776532 122333334788885 66 457999999999999999999886642211 1 1111 1211
Q ss_pred CCceeeecccccC--CCC-cceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCCCCCCCcHHHHH--HHHH
Q 041829 292 ADSFNMNAHKWFL--TNF-DCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWM--VLRL 366 (486)
Q Consensus 292 aDs~~~~~hK~l~--~p~-~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~--~l~~ 366 (486)
=.++.++-|-++ .+. ||=.++++++.......+.-.--++..-. ++ +..|.|.- .++.. .++.
T Consensus 245 -~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~S------NP----PAyGArIV-~kvL~tP~lre 312 (410)
T KOG1412|consen 245 -LFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWS------NP----PAYGARIV-HKVLSTPELRE 312 (410)
T ss_pred -EEEEhhhhhhcccccccccceEEEecChhHHHHHHHHHHHHHhhccC------CC----cchhhHHH-HHHhcCHHHHH
Confidence 245667777664 333 34445556654332221111100110000 00 00111100 00000 1111
Q ss_pred hChhhHHHHHHHHHHHHHHHHHHHhcC--CC-eEEecCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEee
Q 041829 367 YGLENLQGYIRNHIQLAKHFEGLVAQD--LR-FEVVTPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHT 443 (486)
Q Consensus 367 ~g~~g~~~~~~~~~~~a~~l~~~l~~~--~~-~~~~~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~ 443 (486)
.-...++.+-.|..+++..|++.|..+ || +.=+ ..+.++++|. +. +..-.+.|.+...+++...
T Consensus 313 ~W~~sik~MssRI~~MR~aLrd~L~aL~TPGtWDHI-~~QiGMFSyT--GL----------tp~qV~~li~~h~vyLl~~ 379 (410)
T KOG1412|consen 313 QWIQSIKTMSSRIKKMRTALRDHLVALKTPGTWDHI-TQQIGMFSYT--GL----------TPAQVDHLIENHKVYLLSD 379 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHH-Hhhccceeec--CC----------CHHHHHHHHHhceEEEecC
Confidence 224456778888899999999999875 22 1111 1334555544 21 1234566777776776542
Q ss_pred eECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 444 VLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 444 ~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
=||+++.. +...+|...++|.+..+.+.
T Consensus 380 -------GRInisGL--N~~NveyVAkAIde~Vr~~~ 407 (410)
T KOG1412|consen 380 -------GRINISGL--NMKNVEYVAKAIDETVRAIK 407 (410)
T ss_pred -------CcEeeecc--ccccHHHHHHHHHHHHHhhc
Confidence 25565222 34568888888888776553
No 394
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=96.65 E-value=0.095 Score=50.18 Aligned_cols=296 Identities=15% Similarity=0.129 Sum_probs=140.2
Q ss_pred hhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHH
Q 041829 113 AATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKAC 192 (486)
Q Consensus 113 ~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~ 192 (486)
...+||+++ +.|-+++|--... +--++.+.|+.-.+.|...|.... .....+...|+...+-++++....
T Consensus 44 ~s~eL~~~I-r~LH~~VGNAvt~-----gr~IV~GtGsTQL~~AalyALSp~----~~~~~~p~~VVa~aPYY~~Y~~qt 113 (363)
T PF04864_consen 44 ISPELERQI-RRLHRVVGNAVTD-----GRYIVFGTGSTQLFNAALYALSPN----ASPSSSPASVVAAAPYYSSYPEQT 113 (363)
T ss_dssp S-HHHHHHH-HHHHHHH-SB--T-----TSEEEEECHHHHHHHHHHHHHCHH----T-TTSSSEEEEE-SS--CHHHHHC
T ss_pred ccHHHHHHH-HHHHHHhcccccc-----CcEEEEcCCHHHHHHHHHHhcCCC----CCCCCCCceeEecCCCccchHHHH
Confidence 345666653 4466667753321 234455555544444444443321 001114456665555555566666
Q ss_pred HHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 193 QIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 193 ~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
.++.- ....+.-|... |. .++ ...+++=++|.|+||.|.+-. .+++.-+..++.|-||
T Consensus 114 ~~f~s---~~y~w~Gda~~-~~----------~~~---~~~~~IElVTSPNNPDG~lr~-----~V~~g~~~k~I~D~AY 171 (363)
T PF04864_consen 114 DFFDS---RLYKWAGDASN-FK----------NSD---NPSPYIELVTSPNNPDGQLRE-----AVLNGSSGKVIHDLAY 171 (363)
T ss_dssp CCT-B---TTEEEEEECCC-GT----------T-S----CCGEEEEEESS-TTT-----------SSTTTEEEEEEE-TT
T ss_pred Hhccc---cCccccccHHh-hc----------cCC---CCCCeEEEEeCCCCCcccccc-----hhcCCCCcceeeeeee
Confidence 55544 44555555431 22 111 123678889999999998621 1234456677899887
Q ss_pred cchhccCccchhcccCCcCCCceeeecccccC-CCCcceEEEEeCchHHHHHhcCCcccccccccccCCccCCCCCccCC
Q 041829 273 AGSACICPEYRQYIDGVEEADSFNMNAHKWFL-TNFDCSALWVKDRNTLIQSLSTNPEFLKNKASQANMVVDYKDWQIPL 351 (486)
Q Consensus 273 g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~-~p~~~g~l~~r~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~~~ 351 (486)
-... +.+.... ..-|.+.|...|.=+ +..-.|+-++||++...+. ..|+..+ ++..
T Consensus 172 YWPh-----yTpI~~~-aD~DiMLFT~SK~TGHAGSR~GWAlVKD~~Va~kM----~~y~~ln-------------TiGv 228 (363)
T PF04864_consen 172 YWPH-----YTPITAP-ADHDIMLFTLSKLTGHAGSRFGWALVKDEEVAKKM----TKYMELN-------------TIGV 228 (363)
T ss_dssp -STT-----TS---S--B--SEEEEEHHHHCS-GGG-EEEEEES-HHHHHHH----HHHHHHH-------------CSS-
T ss_pred eccc-----ccccCCC-CCCceEEEEEecccCccccccceeeecCHHHHHHH----HHHHHHh-------------cccC
Confidence 5533 3222111 145899999989764 3445899999998866543 3455332 1222
Q ss_pred CCC--CCcHHHHHHHHH-hChh-----hHHHHHHHHHHHHHHHHHHHhcCCCeEEec-CCC------------ceEEEEE
Q 041829 352 GRR--FRSLKLWMVLRL-YGLE-----NLQGYIRNHIQLAKHFEGLVAQDLRFEVVT-PRI------------FSLVCFR 410 (486)
Q Consensus 352 sr~--~~~l~~~~~l~~-~g~~-----g~~~~~~~~~~~a~~l~~~l~~~~~~~~~~-~~~------------~~~v~f~ 410 (486)
||- .+++++..++.. ++.+ -+.--.+...++=+.|++.+++-..|.+.. +|. ...-.++
T Consensus 229 S~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L~~~~~~S~rFSLq~~~~~yC~ff~~~~~psPafAWlk 308 (363)
T PF04864_consen 229 SRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKLRAAVSASKRFSLQKFSPQYCNFFKRVREPSPAFAWLK 308 (363)
T ss_dssp -HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHHHHHHCCSSSEEE---SCEEETTTTCEEE---SEEEEE
T ss_pred cHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHHHHHHHhcCceecCcCCchhccccccccCCCCCeEEEe
Confidence 322 344554433322 2221 222223334445566778888777787743 221 1222333
Q ss_pred ecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeEC-CEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 411 LLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLS-GKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 411 ~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~-~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
.... .+ ....+.|.+.+++--++..+. +..++|+|+ .-+++|.+.+++.|..+
T Consensus 309 Ce~e------ed---~DC~~~l~~~~I~tr~G~~fga~~ryVRlSm---l~~~d~Fd~l~~rL~~l 362 (363)
T PF04864_consen 309 CERE------ED---EDCYAVLREAKIITRSGVLFGADSRYVRLSM---LKRDDDFDQLLERLSKL 362 (363)
T ss_dssp ESSC------GG---SSHHHHHHCTTEEEEEGGGGTS-TTEEEEES---SS-HHHHHHHHHHHHCC
T ss_pred cCCc------cc---ccHHHHHHhCCcccCCCCccCCCCCeEEEec---cCCHHHHHHHHHHHHhh
Confidence 3321 11 123344444553333333332 246999998 44899999999998753
No 395
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=95.45 E-value=0.17 Score=48.23 Aligned_cols=259 Identities=13% Similarity=0.131 Sum_probs=136.3
Q ss_pred CCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---C
Q 041829 174 EKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---D 250 (486)
Q Consensus 174 ~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---d 250 (486)
+...||++.++-.-..+.-...|+ .+..+..-......+|.+.+-+.+.+... | -+++.--+..|+||+= +
T Consensus 145 ~~~~I~ip~PTWgNh~~if~~ag~---~~~~yrYyd~~t~gld~~g~ledl~~~p~-g--s~ilLhaCaHNPTGvDPt~e 218 (427)
T KOG1411|consen 145 PSRDIYIPDPTWGNHKNIFKDAGL---PVKFYRYYDPKTRGLDFKGMLEDLGEAPE-G--SIILLHACAHNPTGVDPTKE 218 (427)
T ss_pred cccceeecCCcccccCccccccCc---ceeeeeeccccccccchHHHHHHHhcCCC-C--cEEEeehhhcCCCCCCccHH
Confidence 455788898885555555566688 54444332222357898887777765432 2 1334444457888853 3
Q ss_pred ChHHHHHHHHHhCCEEEeeccccchhccCcc-----chhcccCCcCC-CceeeecccccCCC---CcceEEEEeCchHHH
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGSACICPE-----YRQYIDGVEEA-DSFNMNAHKWFLTN---FDCSALWVKDRNTLI 321 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~-----~~~~~~~~~~a-Ds~~~~~hK~l~~p---~~~g~l~~r~~~~~~ 321 (486)
..++|.++.++.+..-..|.||.|+..-... .+..+. .+- -.++.+.-|-++.- .|+=-+++.+.+...
T Consensus 219 qw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~--~g~~~~laQSyAKNMGLYgERvGa~svvc~~ad~A~ 296 (427)
T KOG1411|consen 219 QWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVE--DGHEILLAQSYAKNMGLYGERVGALSVVCKDADEAK 296 (427)
T ss_pred HHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHH--cCCceEeehhhhhhcchhhhccceeEEEecCHHHHH
Confidence 3678899999999999999999886642111 011111 011 13455566666422 123334555554333
Q ss_pred HHhc-----CCcccccccccccCCccCCCCCccCCCCCCCcHHHHHHHHHhChhhHHHHHHHHHHHHHHHHHHHhcCCCe
Q 041829 322 QSLS-----TNPEFLKNKASQANMVVDYKDWQIPLGRRFRSLKLWMVLRLYGLENLQGYIRNHIQLAKHFEGLVAQDLRF 396 (486)
Q Consensus 322 ~~~~-----~~~~yl~~~~~~~~~~~~~~~~~~~~sr~~~~l~~~~~l~~~g~~g~~~~~~~~~~~a~~l~~~l~~~~~~ 396 (486)
+.-+ .++-|..+.. .++|-...+----.|+.--..-...+.+|.+.+++.|.+.|++. |-
T Consensus 297 rV~SQlk~liRpmYSnPP~--------------hGArIv~~Il~d~~l~~~W~~evk~MadRi~~mR~~L~d~L~~~-gs 361 (427)
T KOG1411|consen 297 RVESQLKILIRPMYSNPPL--------------HGARIVATILSDPDLKNQWLGEVKGMADRIISMRQQLFDALEKE-GS 361 (427)
T ss_pred HHHHHHHHHhcccccCCCc--------------cchhhhhhccCChHHHHHHHHHHHHHHHhhhhhHHHHhHHhhcC-CC
Confidence 2211 1333322210 11111110000001111112334667888899999999999875 32
Q ss_pred EE-e--cCCCceEEEEEecCCCCCcccchHHHHHHHHHHHccCcEEEEeeeECCEeEEEEEecCCCCCHHHHHHHHHHHH
Q 041829 397 EV-V--TPRIFSLVCFRLLPPHNDEDHGNKLNHKLLDDINSTGKIFISHTVLSGKYILRFAVGAPLTEWRHVNAAWEVMQ 473 (486)
Q Consensus 397 ~~-~--~~~~~~~v~f~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~ 473 (486)
.. + ...+.+++||.-.. .+-.+.|.++-.++++. --|||+ .. .+...++.+.++|.
T Consensus 362 ~~~W~hI~~QIGMF~fTgl~------------peQv~~l~ke~~iYmT~-------dGRiS~-aG-~ss~nV~yLa~aih 420 (427)
T KOG1411|consen 362 PGNWSHITKQIGMFCFTGLN------------PEQVDWLTKEYHIYLTK-------DGRISM-AG-LSSSNVPYLADAIH 420 (427)
T ss_pred CccHHHHHHhhheeeecCCC------------HHHHHHHHhhheeeecc-------CceEee-cc-ccccCCcccchhhH
Confidence 21 0 12456788886432 22344555555566553 246676 22 23455777777776
Q ss_pred HHH
Q 041829 474 DKA 476 (486)
Q Consensus 474 ~~~ 476 (486)
++.
T Consensus 421 ~vt 423 (427)
T KOG1411|consen 421 AVT 423 (427)
T ss_pred hHh
Confidence 654
No 396
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=93.61 E-value=0.18 Score=43.27 Aligned_cols=63 Identities=10% Similarity=0.059 Sum_probs=47.1
Q ss_pred cccChhhHHHHHHHHHHHHHHcCC--CCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc
Q 041829 108 WITSPAATELEMIVLDWLAKLLKL--PEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH 185 (486)
Q Consensus 108 ~~~~~~~~~le~~~~~~la~l~g~--~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H 185 (486)
|....+..++.+++.+|+.+.+|. +.+ ....++|+|++.++..++.+..+ +++.|+++...+
T Consensus 88 Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~-----pd~Ivvt~Ga~~al~~l~~~l~d-----------pGD~VlVp~P~Y 151 (153)
T PLN02994 88 FQDYHGLANFRKAIANFMAEARGGRVKFD-----ADMIVLSAGATAANEIIMFCIAD-----------PGDAFLVPTPYY 151 (153)
T ss_pred CCCCCCcHHHHHHHHHHHHHHhCCCCccc-----hhheEEcCCHHHHHHHHHHHHcC-----------CCCEEEEeCCCC
Confidence 445556789999999999999883 221 12689999999988777766554 788888887766
Q ss_pred h
Q 041829 186 S 186 (486)
Q Consensus 186 ~ 186 (486)
+
T Consensus 152 ~ 152 (153)
T PLN02994 152 A 152 (153)
T ss_pred C
Confidence 4
No 397
>cd01455 vWA_F11C1-5a_type Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A
Probab=73.00 E-value=13 Score=33.04 Aligned_cols=53 Identities=9% Similarity=-0.061 Sum_probs=41.8
Q ss_pred HHHHHHHHHHH-h-CCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 218 DSLAEAISRDL-T-IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 218 ~~L~~~i~~~~-~-~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
++|..+++.-. + ....-++|++|=|+++.|.++|++.-+++++++|+.+|+=+
T Consensus 95 dAi~~av~rl~~~~~a~~kvvILLTDG~n~~~~i~P~~aAa~lA~~~gV~iytIg 149 (191)
T cd01455 95 EATEFAIKELAAKEDFDEAIVIVLSDANLERYGIQPKKLADALAREPNVNAFVIF 149 (191)
T ss_pred HHHHHHHHHHHhcCcCCCcEEEEEeCCCcCCCCCChHHHHHHHHHhCCCEEEEEE
Confidence 88888887653 2 22334678888899999999999988999999999988643
No 398
>COG0386 BtuE Glutathione peroxidase [Posttranslational modification, protein turnover, chaperones]
Probab=71.58 E-value=37 Score=28.84 Aligned_cols=95 Identities=15% Similarity=0.214 Sum_probs=62.9
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC--hHHHHHHHHH-hCCE------EEeecc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP--LLALGNIAKS-NGMW------FHVDAA 271 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~--l~~I~~ia~~-~g~~------lhvD~A 271 (486)
-+..|.+-..-.|+-..+.|++.-++...+| ++|+-.|.|-.|.=+| -+||.++|.. ||+- +.|-|.
T Consensus 27 VlLIVNtASkCGfTpQYegLe~Ly~ky~~~G----f~VLgFPcNQF~~QEPg~~eEI~~fC~~~YgVtFp~f~Ki~VnG~ 102 (162)
T COG0386 27 VLLIVNTASKCGFTPQYEGLEALYKKYKDKG----FEVLGFPCNQFGGQEPGSDEEIAKFCQLNYGVTFPMFSKIDVNGK 102 (162)
T ss_pred EEEEEEcccccCCcHhHHHHHHHHHHHhhCC----cEEEeccccccccCCCCCHHHHHHHHHhccCceeeeeeEEeecCC
Confidence 3444555443346778899999999888888 5788888888886654 7999999986 6753 555554
Q ss_pred ccchhccCccchhccc---CCcCCCceeeecccccC
Q 041829 272 YAGSACICPEYRQYID---GVEEADSFNMNAHKWFL 304 (486)
Q Consensus 272 ~g~~~~~~~~~~~~~~---~~~~aDs~~~~~hK~l~ 304 (486)
.+. |-++.+.. +......+-|+++|+|-
T Consensus 103 ~a~-----PLy~~L~~~~~g~~~~~~IkWNFtKFLv 133 (162)
T COG0386 103 NAH-----PLYKYLKEQKPGKLGGKDIKWNFTKFLV 133 (162)
T ss_pred CCC-----cHHHHHHhcCCCCccCCccceeeEEEEE
Confidence 332 22222221 22246788899999874
No 399
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=69.74 E-value=70 Score=29.17 Aligned_cols=67 Identities=13% Similarity=0.121 Sum_probs=39.2
Q ss_pred hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC---ChHHHHHHHHHh
Q 041829 186 SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD---PLLALGNIAKSN 262 (486)
Q Consensus 186 ~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id---~l~~I~~ia~~~ 262 (486)
....+.|+.+|+ .++.++++... ....+.|.+++.+..+.|.. .|+ +|.+. +-..+-.+|.+.
T Consensus 46 ~~~~~~A~~lgi---p~~~i~~~~~~--~~~~~~l~~~l~~~~~~g~~--~vv-------~G~i~sd~~~~~~e~v~~~~ 111 (218)
T TIGR03679 46 ELTRLQAEALGI---PLVKIETSGEK--EKEVEDLKGALKELKREGVE--GIV-------TGAIASRYQKSRIERICEEL 111 (218)
T ss_pred HHHHHHHHHhCC---CEEEEECCCCC--hHHHHHHHHHHHHHHHcCCC--EEE-------ECCcccHhHHHHHHHHHHhC
Confidence 345677888999 88888876321 33455677777766554422 221 24442 345555777776
Q ss_pred CCEE
Q 041829 263 GMWF 266 (486)
Q Consensus 263 g~~l 266 (486)
|+.+
T Consensus 112 gl~~ 115 (218)
T TIGR03679 112 GLKV 115 (218)
T ss_pred CCeE
Confidence 6654
No 400
>COG2515 Acd 1-aminocyclopropane-1-carboxylate deaminase [Amino acid transport and metabolism]
Probab=69.65 E-value=77 Score=30.33 Aligned_cols=119 Identities=16% Similarity=0.086 Sum_probs=68.1
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC--c--hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCH
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT--H--SALQKACQIGGIHPQNFRVLKTDSSTNYSLSP 217 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~--H--~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~ 217 (486)
.-++|.||.+||.....+|-.+++. =+.+.++.... + .-..--...+|. +++.++...+ +.++.
T Consensus 65 dTlvT~GgiQSNh~r~tAavA~~lG-------l~~v~ile~~~~~y~~ngn~Ll~~l~G~---~~~~~~~~~d--~~~~~ 132 (323)
T COG2515 65 DTLVTYGGIQSNHVRQTAAVAAKLG-------LKCVLILENIEANYLLNGNLLLSKLMGA---EVRAVDAGTD--IGINA 132 (323)
T ss_pred cEEEEecccchhHHHHHHHHHHhcC-------CcEEEEEeccccccccccchhhhhhcCc---eEEEecCCCC--hhhch
Confidence 3699999999998776665544321 13334433222 0 013334556788 8888775432 32222
Q ss_pred HHHHHHHHHHHhCCCccEEEEEecCCccc---cccCChHHHHHHHHH-hCCEEEeeccccc
Q 041829 218 DSLAEAISRDLTIGLIPFFLCATVGTTSS---TAVDPLLALGNIAKS-NGMWFHVDAAYAG 274 (486)
Q Consensus 218 ~~L~~~i~~~~~~g~~p~~vv~~~~~t~t---G~id~l~~I~~ia~~-~g~~lhvD~A~g~ 274 (486)
.++...+...++|.+|. |+-..|.++. |.+.=..||.+-+++ ..+-.+|.++-++
T Consensus 133 -~~~~~~e~~~~~g~kpy-vIp~GG~~~~g~lGyv~~a~Ei~~Q~~~~~~fD~vVva~gs~ 191 (323)
T COG2515 133 -SAEELAEEVRKQGGKPY-VIPEGGSSPLGALGYVRLALEIAEQAEQLLKFDSVVVAPGSG 191 (323)
T ss_pred -hhHHHHHHHHhcCCCCc-EeccCCcCccccccHHHHHHHHHHHHhhccCCCEEEEeCCCc
Confidence 22333344455678886 4455557884 455667788888887 4555666655433
No 401
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=67.85 E-value=20 Score=31.42 Aligned_cols=70 Identities=16% Similarity=0.214 Sum_probs=45.0
Q ss_pred CCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChH
Q 041829 174 EKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLL 253 (486)
Q Consensus 174 ~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~ 253 (486)
++..++......+.......++|+ ++...+.+ +.++++..+.+..+.|.. +|+...
T Consensus 78 ~~Iavv~~~~~~~~~~~~~~ll~~---~i~~~~~~-------~~~e~~~~i~~~~~~G~~--viVGg~------------ 133 (176)
T PF06506_consen 78 PKIAVVGYPNIIPGLESIEELLGV---DIKIYPYD-------SEEEIEAAIKQAKAEGVD--VIVGGG------------ 133 (176)
T ss_dssp SEEEEEEESS-SCCHHHHHHHHT----EEEEEEES-------SHHHHHHHHHHHHHTT----EEEESH------------
T ss_pred CcEEEEecccccHHHHHHHHHhCC---ceEEEEEC-------CHHHHHHHHHHHHHcCCc--EEECCH------------
Confidence 344455555555668888888999 88888875 577888888887777632 333211
Q ss_pred HHHHHHHHhCCEEE
Q 041829 254 ALGNIAKSNGMWFH 267 (486)
Q Consensus 254 ~I~~ia~~~g~~lh 267 (486)
-+.++|+++|+..+
T Consensus 134 ~~~~~A~~~gl~~v 147 (176)
T PF06506_consen 134 VVCRLARKLGLPGV 147 (176)
T ss_dssp HHHHHHHHTTSEEE
T ss_pred HHHHHHHHcCCcEE
Confidence 13788899888744
No 402
>cd01994 Alpha_ANH_like_IV This is a subfamily of Adenine nucleotide alpha hydrolases superfamily.Adeninosine nucleotide alpha hydrolases superfamily includes N type ATP PPases and ATP sulphurylases. It forms a apha/beta/apha fold which binds to Adenosine group. This subfamily of proteins is predicted to bind ATP. This domainhas a strongly conserved motif SGGKD at the N terminus.
Probab=62.26 E-value=1.2e+02 Score=27.14 Aligned_cols=101 Identities=11% Similarity=0.110 Sum_probs=56.6
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE--e-cCC---------CchhHHHHHHHhCCCCCCeEEEeCCCC
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY--A-SDQ---------THSALQKACQIGGIHPQNFRVLKTDSS 210 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~--~-s~~---------~H~s~~~a~~~~g~g~~~v~~v~~~~~ 210 (486)
.+..|||..+.+.+..+.... ...+.+ . +.. ....+.+.|+.+|+ .++.++++.+
T Consensus 3 ~v~~SGGkDS~~al~~a~~~G----------~~v~~l~~~~~~~~~~~~~h~~~~e~~~~~A~~lgi---pl~~i~~~~~ 69 (194)
T cd01994 3 VALISGGKDSCYALYRALEEG----------HEVVALLNLTPEEGSSMMYHTVNHELLELQAEAMGI---PLIRIEISGE 69 (194)
T ss_pred EEEecCCHHHHHHHHHHHHcC----------CEEEEEEEEecCCCCcccccccCHHHHHHHHHHcCC---cEEEEeCCCC
Confidence 467788999987766554421 111111 1 111 12245567888999 8888876532
Q ss_pred CCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC---hHHHHHHHHHhCCEEE
Q 041829 211 TNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP---LLALGNIAKSNGMWFH 267 (486)
Q Consensus 211 ~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~---l~~I~~ia~~~g~~lh 267 (486)
. .--.+.|.+++++..++|.. .| .+|.++. -..+-++|++.|+..+
T Consensus 70 ~--e~~~~~l~~~l~~~~~~g~~--~v-------v~G~i~sd~~~~~~e~~~~~~gl~~~ 118 (194)
T cd01994 70 E--EDEVEDLKELLRKLKEEGVD--AV-------VFGAILSEYQRTRVERVCERLGLEPL 118 (194)
T ss_pred c--hHHHHHHHHHHHHHHHcCCC--EE-------EECccccHHHHHHHHHHHHHcCCEEE
Confidence 1 11226666777665544321 22 2455532 4667778999887753
No 403
>PF01972 SDH_sah: Serine dehydrogenase proteinase; InterPro: IPR002825 This family of archaebacterial proteins, formerly known as DUF114, has been found to be a serine dehydrogenase proteinase distantly related to ClpP proteinases that belong to the serine proteinase superfamily. The family belong to MEROPS peptidase family S49; they are mostly unassigned peptidases but include the archaean signal peptide peptidase 1 []. The family has a catalytic triad of Ser, Asp, His residues, which shows an altered residue ordering compared with the ClpP proteinases but similar to that of the carboxypeptidase clan []. ; GO: 0016021 integral to membrane
Probab=59.01 E-value=67 Score=30.27 Aligned_cols=52 Identities=17% Similarity=0.093 Sum_probs=37.9
Q ss_pred CccccccCChHHHHHHHHHhCCE--EEe-eccccchhccCccchhcccCCcCCCceeeecccccC
Q 041829 243 TTSSTAVDPLLALGNIAKSNGMW--FHV-DAAYAGSACICPEYRQYIDGVEEADSFNMNAHKWFL 304 (486)
Q Consensus 243 ~t~tG~id~l~~I~~ia~~~g~~--lhv-D~A~g~~~~~~~~~~~~~~~~~~aDs~~~~~hK~l~ 304 (486)
.|+-|.++.-.+|+.+.+++... ++| +-|.+++.+.+- .||-+.+++|-.++
T Consensus 98 ~TpGG~v~AA~~I~~~l~~~~~~v~v~VP~~A~SAGTlIAL----------aADeIvM~p~a~LG 152 (285)
T PF01972_consen 98 HTPGGLVDAAEQIARALREHPAKVTVIVPHYAMSAGTLIAL----------AADEIVMGPGAVLG 152 (285)
T ss_pred ECCCCcHHHHHHHHHHHHhCCCCEEEEECcccccHHHHHHH----------hCCeEEECCCCccC
Confidence 57889999999999999998533 333 556666554321 58888888887776
No 404
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=58.90 E-value=1.2e+02 Score=28.59 Aligned_cols=78 Identities=13% Similarity=0.065 Sum_probs=51.0
Q ss_pred CCeEEEecCCCchhHHHHHHH---hCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-
Q 041829 174 EKLVVYASDQTHSALQKACQI---GGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV- 249 (486)
Q Consensus 174 ~~~~v~~s~~~H~s~~~a~~~---~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i- 249 (486)
+..+|++.+....-..-+.++ .|+ ++..+|+|- -|++++++..++...++..+-++|-++|....|.+
T Consensus 30 g~~liLvaR~~~kL~~la~~l~~~~~v---~v~vi~~DL-----s~~~~~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~ 101 (265)
T COG0300 30 GYNLILVARREDKLEALAKELEDKTGV---EVEVIPADL-----SDPEALERLEDELKERGGPIDVLVNNAGFGTFGPFL 101 (265)
T ss_pred CCEEEEEeCcHHHHHHHHHHHHHhhCc---eEEEEECcC-----CChhHHHHHHHHHHhcCCcccEEEECCCcCCccchh
Confidence 567788887665433322222 356 888899884 36677777776666665566778888898888866
Q ss_pred -CChHHHHHHH
Q 041829 250 -DPLLALGNIA 259 (486)
Q Consensus 250 -d~l~~I~~ia 259 (486)
.+++++.++-
T Consensus 102 ~~~~~~~~~mi 112 (265)
T COG0300 102 ELSLDEEEEMI 112 (265)
T ss_pred hCChHHHHHHH
Confidence 3455555544
No 405
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=58.44 E-value=1.1e+02 Score=30.69 Aligned_cols=132 Identities=14% Similarity=0.206 Sum_probs=76.1
Q ss_pred CCeEEEecCCCch-hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc--------
Q 041829 174 EKLVVYASDQTHS-ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT-------- 244 (486)
Q Consensus 174 ~~~~v~~s~~~H~-s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t-------- 244 (486)
.+.++|+|...-. .+.--++.+|+..+++...+ ..++|++.+.+++. +|.++|+..-.|
T Consensus 120 ~~~vLYVsGEES~~QiklRA~RL~~~~~~l~l~a-------Et~~e~I~~~l~~~-----~p~lvVIDSIQT~~s~~~~S 187 (456)
T COG1066 120 RGKVLYVSGEESLQQIKLRADRLGLPTNNLYLLA-------ETNLEDIIAELEQE-----KPDLVVIDSIQTLYSEEITS 187 (456)
T ss_pred cCcEEEEeCCcCHHHHHHHHHHhCCCccceEEeh-------hcCHHHHHHHHHhc-----CCCEEEEeccceeecccccC
Confidence 3478888866544 46667888998665655544 45889998888773 366777665332
Q ss_pred cccccCCh----HHHHHHHHHhCCEEEe------eccccchhccCccch---hcccCCcCCCceeeecccccCCCC-cce
Q 041829 245 SSTAVDPL----LALGNIAKSNGMWFHV------DAAYAGSACICPEYR---QYIDGVEEADSFNMNAHKWFLTNF-DCS 310 (486)
Q Consensus 245 ~tG~id~l----~~I~~ia~~~g~~lhv------D~A~g~~~~~~~~~~---~~~~~~~~aDs~~~~~hK~l~~p~-~~g 310 (486)
..|.+.-+ .++.++||++|+++.. ||+-+|.-.+ ...- -.+.|-....+=.+-.+|-=+++. ..|
T Consensus 188 apGsVsQVRe~t~~L~~~AK~~~i~~fiVGHVTKeG~IAGPrvL-EHmVDtVlyFEGd~~~~~RiLR~vKNRFG~t~EiG 266 (456)
T COG1066 188 APGSVSQVREVAAELMRLAKTKNIAIFIVGHVTKEGAIAGPRVL-EHMVDTVLYFEGDRHSRYRILRSVKNRFGATNELG 266 (456)
T ss_pred CCCcHHHHHHHHHHHHHHHHHcCCeEEEEEEEcccccccCchhe-eeeeeEEEEEeccCCCceeeeehhcccCCccccee
Confidence 33666554 4677789999988654 4555553321 0000 011121122333444456444443 367
Q ss_pred EEEEeCch
Q 041829 311 ALWVKDRN 318 (486)
Q Consensus 311 ~l~~r~~~ 318 (486)
++-+++..
T Consensus 267 vFeM~~~G 274 (456)
T COG1066 267 VFEMTENG 274 (456)
T ss_pred EEEEecCC
Confidence 77776543
No 406
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=56.53 E-value=2.1e+02 Score=28.19 Aligned_cols=104 Identities=8% Similarity=0.034 Sum_probs=57.7
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch------hHHHHHHHhCCCCCCeEEEeCCCCCCCcc
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS------ALQKACQIGGIHPQNFRVLKTDSSTNYSL 215 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~------s~~~a~~~~g~g~~~v~~v~~~~~~~~~i 215 (486)
..+-.|||-.|..++..+.... |.....+-++ .... -+.+.++.+|+ ....+.++
T Consensus 62 ~iV~lSGGkDSs~la~ll~~~~--------gl~~l~vt~~-~~~~~e~~~~n~~~~~~~lgv---d~~~i~~d------- 122 (343)
T TIGR03573 62 CIIGVSGGKDSTYQAHVLKKKL--------GLNPLLVTVD-PGWNTELGVKNLNNLIKKLGF---DLHTITIN------- 122 (343)
T ss_pred EEEECCCCHHHHHHHHHHHHHh--------CCceEEEEEC-CCCCCHHHHHHHHHHHHHcCC---CeEEEeCC-------
Confidence 4778889988877764332221 1122223222 2222 25566777888 77776554
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
++.+........++...|... ........+.++|+++|+.+++.|..+.
T Consensus 123 -~~~~~~l~~~~~~~~~~pc~~---------c~~~~~~~l~~~A~~~gi~~Il~G~~~d 171 (343)
T TIGR03573 123 -PETFRKLQRAYFKKVGDPEWP---------QDHAIFASVYQVALKFNIPLIIWGENIA 171 (343)
T ss_pred -HHHHHHHHHHHHhccCCCchh---------hhhHHHHHHHHHHHHhCCCEEEeCCCHH
Confidence 444544444433322222211 1122356888999999999999987654
No 407
>smart00642 Aamy Alpha-amylase domain.
Probab=56.21 E-value=27 Score=30.35 Aligned_cols=31 Identities=13% Similarity=0.172 Sum_probs=26.3
Q ss_pred CccccccCChHHHHHHHHHhCCEEEeecccc
Q 041829 243 TTSSTAVDPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 243 ~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
....|..++++++++-||++|+.+++|-...
T Consensus 63 ~~~~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 63 DPRFGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred CcccCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 3456888999999999999999999997543
No 408
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=54.79 E-value=88 Score=26.43 Aligned_cols=55 Identities=18% Similarity=0.169 Sum_probs=38.5
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCCh--HHHHHHHH
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPL--LALGNIAK 260 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l--~~I~~ia~ 260 (486)
++..+++| .-|.+.+++.+++..+.....-+++.++|....+.++++ +++.+..+
T Consensus 53 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~ 109 (167)
T PF00106_consen 53 KITFIECD-----LSDPESIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFR 109 (167)
T ss_dssp EEEEEESE-----TTSHHHHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHH
T ss_pred cccccccc-----ccccccccccccccccccccccccccccccccccccccccchhhhhccc
Confidence 88888887 348888888888766444445677778887777777665 45554443
No 409
>COG2870 RfaE ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase [Cell envelope biogenesis, outer membrane]
Probab=53.15 E-value=37 Score=33.71 Aligned_cols=95 Identities=18% Similarity=0.204 Sum_probs=55.9
Q ss_pred ecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHH
Q 041829 180 ASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIA 259 (486)
Q Consensus 180 ~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia 259 (486)
+....|+.+.|. +++. +.+++.+++..+.. ...+.+.|-+.++...+.- ..++++ ...-|.+.+.+++.++|
T Consensus 96 ~~~~~r~T~~K~-Rv~s-~nQQllRvD~Ee~~-~~~~~~~ll~~~~~~l~~~---~~vVLS--DY~KG~L~~~q~~I~~a 167 (467)
T COG2870 96 LRDKNRPTIVKL-RVLS-RNQQLLRLDFEEKF-PIEDENKLLEKIKNALKSF---DALVLS--DYAKGVLTNVQKMIDLA 167 (467)
T ss_pred EeecCCCceeee-eeec-ccceEEEecccccC-cchhHHHHHHHHHHHhhcC---CEEEEe--ccccccchhHHHHHHHH
Confidence 344566665543 1111 22266666554321 1245666666666544321 133333 45679999999999999
Q ss_pred HHhCCEEEeec------cccchhccCccc
Q 041829 260 KSNGMWFHVDA------AYAGSACICPEY 282 (486)
Q Consensus 260 ~~~g~~lhvD~------A~g~~~~~~~~~ 282 (486)
|+.|+.+.||- =|.|..+..|..
T Consensus 168 r~~~~pVLvDPKg~Df~~Y~GAtLiTPN~ 196 (467)
T COG2870 168 REAGIPVLVDPKGKDFEKYRGATLITPNL 196 (467)
T ss_pred HHcCCcEEECCCCcchhhhCCCeecCCCH
Confidence 99999999993 355555555543
No 410
>PF07071 DUF1341: Protein of unknown function (DUF1341); InterPro: IPR010763 Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.; PDB: 3NZR_D 3LM7_A 3M0Z_B 3M6Y_A 3N73_A 3MUX_A.
Probab=52.94 E-value=67 Score=28.63 Aligned_cols=69 Identities=9% Similarity=0.072 Sum_probs=43.6
Q ss_pred hHHHHHHHh-CCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc--CChHHHHHHHHHhC
Q 041829 187 ALQKACQIG-GIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--DPLLALGNIAKSNG 263 (486)
Q Consensus 187 s~~~a~~~~-g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--d~l~~I~~ia~~~g 263 (486)
++..++.++ .+|...+.+.|.. +.-..|+|++.-+.+.++|. -+ -|||-| |++++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPm~----Gl~~leE~~avAkA~a~~g~-----~l----EPTGGIdl~N~~~I~~i~l~aG 202 (218)
T PF07071_consen 136 PVETAIAMLKDMGGSSIKFFPMG----GLKHLEELKAVAKACARNGF-----TL----EPTGGIDLDNFEEIVKICLDAG 202 (218)
T ss_dssp EHHHHHHHHHHTT--EEEE---T----TTTTHHHHHHHHHHHHHCT------EE----EEBSS--TTTHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCc-----ee----CCcCCcCHHHHHHHHHHHHHcC
Confidence 455555543 4555678888875 35688999988888888772 22 378888 68999999999998
Q ss_pred CEEEe
Q 041829 264 MWFHV 268 (486)
Q Consensus 264 ~~lhv 268 (486)
+..++
T Consensus 203 v~~vi 207 (218)
T PF07071_consen 203 VEKVI 207 (218)
T ss_dssp -S-B-
T ss_pred CCeec
Confidence 76543
No 411
>COG0329 DapA Dihydrodipicolinate synthase/N-acetylneuraminate lyase [Amino acid transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=52.89 E-value=21 Score=34.34 Aligned_cols=56 Identities=11% Similarity=0.118 Sum_probs=45.4
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-|.+.+ +.+|.+++++.++...++|-.-++++.+.|..++=..+.-.++.+.+.+.
T Consensus 14 TPF~~d--g~vD~~a~~~lv~~li~~Gv~gi~~~GttGE~~~Ls~eEr~~v~~~~v~~ 69 (299)
T COG0329 14 TPFDED--GSVDEEALRRLVEFLIAAGVDGLVVLGTTGESPTLTLEERKEVLEAVVEA 69 (299)
T ss_pred cCCCCC--CCcCHHHHHHHHHHHHHcCCCEEEECCCCccchhcCHHHHHHHHHHHHHH
Confidence 345543 58999999999999998887767777788888888888888898888875
No 412
>TIGR02189 GlrX-like_plant Glutaredoxin-like family. This family of glutaredoxin-like proteins is aparrently limited to plants. Multiple isoforms are found in A. thaliana and O.sativa.
Probab=52.47 E-value=95 Score=24.16 Aligned_cols=72 Identities=17% Similarity=0.222 Sum_probs=44.0
Q ss_pred CCeEEEecCCCchhH--HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC
Q 041829 174 EKLVVYASDQTHSAL--QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP 251 (486)
Q Consensus 174 ~~~~v~~s~~~H~s~--~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~ 251 (486)
.+.+||....+++|. .+...-.|+ ....+.++.+ .+..++.+.+.+.+.....|.+. ..| ...|-.|+
T Consensus 8 ~~Vvvysk~~Cp~C~~ak~~L~~~~i---~~~~vdid~~----~~~~~~~~~l~~~tg~~tvP~Vf--i~g-~~iGG~dd 77 (99)
T TIGR02189 8 KAVVIFSRSSCCMCHVVKRLLLTLGV---NPAVHEIDKE----PAGKDIENALSRLGCSPAVPAVF--VGG-KLVGGLEN 77 (99)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCC---CCEEEEcCCC----ccHHHHHHHHHHhcCCCCcCeEE--ECC-EEEcCHHH
Confidence 566778777777774 345555677 7778888743 24455666666554444556532 233 46677777
Q ss_pred hHHH
Q 041829 252 LLAL 255 (486)
Q Consensus 252 l~~I 255 (486)
+.++
T Consensus 78 l~~l 81 (99)
T TIGR02189 78 VMAL 81 (99)
T ss_pred HHHH
Confidence 7654
No 413
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=51.86 E-value=1e+02 Score=26.88 Aligned_cols=70 Identities=9% Similarity=0.078 Sum_probs=36.9
Q ss_pred CCeEEEecCCC--chh---HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccc
Q 041829 174 EKLVVYASDQT--HSA---LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTA 248 (486)
Q Consensus 174 ~~~~v~~s~~~--H~s---~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~ 248 (486)
...+|+++... ... ..+..+..|. ++..+.+| .-|+++++++++...+...+...|+-.++....+.
T Consensus 25 ~~~~il~~r~~~~~~~~~~~i~~l~~~g~---~v~~~~~D-----v~d~~~v~~~~~~~~~~~~~i~gVih~ag~~~~~~ 96 (181)
T PF08659_consen 25 ARRLILLGRSGAPSAEAEAAIRELESAGA---RVEYVQCD-----VTDPEAVAAALAQLRQRFGPIDGVIHAAGVLADAP 96 (181)
T ss_dssp -SEEEEEESSGGGSTTHHHHHHHHHHTT----EEEEEE-------TTSHHHHHHHHHTSHTTSS-EEEEEE-------B-
T ss_pred CCEEEEeccCCCccHHHHHHHHHHHhCCC---ceeeeccC-----ccCHHHHHHHHHHHHhccCCcceeeeeeeeecccc
Confidence 34466677662 222 3344445577 89999988 55999999999887665544456776666665555
Q ss_pred cCC
Q 041829 249 VDP 251 (486)
Q Consensus 249 id~ 251 (486)
+.+
T Consensus 97 ~~~ 99 (181)
T PF08659_consen 97 IQD 99 (181)
T ss_dssp GCC
T ss_pred ccc
Confidence 544
No 414
>COG0367 AsnB Asparagine synthase (glutamine-hydrolyzing) [Amino acid transport and metabolism]
Probab=50.95 E-value=1.8e+02 Score=30.64 Aligned_cols=126 Identities=17% Similarity=0.185 Sum_probs=73.0
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeE-EEecCCCch------
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLV-VYASDQTHS------ 186 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~-v~~s~~~H~------ 186 (486)
...+...+.+-+.+.+-.+.. .|++.|||-.+.+.|..+++... .... .|+-...+.
T Consensus 212 ~~~l~~~l~~sV~~r~~advp-------vg~~lSGGlDSS~Iaa~a~~~~~---------~~~~~~fsvg~~~~~~~D~~ 275 (542)
T COG0367 212 AEHLRSLLEDAVKRRLVADVP-------VGVFLSGGLDSSLIAAIAAEELG---------KEGKTTFTVGFEDSDSPDAK 275 (542)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------EEEEeCCCccHHHHHHHHHHhcc---------ccceeeeEeecCCCCCchHH
Confidence 344444444445555533333 58999999987777666655421 1111 022222222
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
-...++..+|. +.+.+. +.++++.+++.+.... .-.+...+...|+--+++.+++.+.++
T Consensus 276 ~a~~~A~~lg~---~h~~~~--------~~~~e~~~~~~~vv~~---------~~~p~~~~~~~ply~~~~~a~~~g~kV 335 (542)
T COG0367 276 YARAVAKFLGT---PHHEII--------LTNEELLNALPEVVKA---------LDTPGGMAASIPLYLLSRKARAEGEKV 335 (542)
T ss_pred HHHHHHHHhCC---CcEEEe--------ecHHHHHHHHHHHHhh---------cCCCCcccchhHHHHHHHhhhhcCcEE
Confidence 24567777888 555554 4556677776664321 111222566688999999999999998
Q ss_pred Eeec-----cccch
Q 041829 267 HVDA-----AYAGS 275 (486)
Q Consensus 267 hvD~-----A~g~~ 275 (486)
...| -+||.
T Consensus 336 vLSGeGADElFgGY 349 (542)
T COG0367 336 VLSGEGADELFGGY 349 (542)
T ss_pred eecCccHHHHhcCC
Confidence 8754 45554
No 415
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=49.02 E-value=46 Score=29.69 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
..-+-|..++=.+-.|..|..|++..-+ ..|..-..+++.++|++||+.++
T Consensus 139 R~GHTEasVdLarlAGl~Pa~VicEi~~-~dG~mar~~~~~~fa~~h~l~~i 189 (203)
T COG0108 139 RRGHTEAAVDLARLAGLKPAGVICEIMN-DDGTMARLPELEEFAKEHGLPVI 189 (203)
T ss_pred cCChHHHHHHHHHHcCCCCcEEEEEEeC-CCccccChHHHHHHHHHcCCcEE
Confidence 3344566666666689999887777654 48999999999999999999875
No 416
>PRK11633 cell division protein DedD; Provisional
Probab=48.96 E-value=81 Score=28.92 Aligned_cols=51 Identities=12% Similarity=0.257 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHccCc-EEEEeee-ECCEeEEEEEecCCCCCHHHHHHHHHHHHHH
Q 041829 423 KLNHKLLDDINSTGK-IFISHTV-LSGKYILRFAVGAPLTEWRHVNAAWEVMQDK 475 (486)
Q Consensus 423 ~~~~~l~~~l~~~g~-~~~~~~~-~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~ 475 (486)
+....|..+|...|. .++.... .+| .+.|+-+ +++.++++.++.+..|+++
T Consensus 161 ~~A~~l~~kL~~~G~~Ay~~~~~~~~G-~~tRV~V-GP~~sk~~ae~~~~~Lk~~ 213 (226)
T PRK11633 161 DKVNEIVAKLRLSGYRVYTVPSTPVQG-KITRIYV-GPDASKDKLKGSLGELKQL 213 (226)
T ss_pred HHHHHHHHHHHHCCCeeEEEeeecCCC-cEEEEEe-CCCCCHHHHHHHHHHHHHh
Confidence 344678899999883 3443332 344 3778888 8999999999999999875
No 417
>PF03162 Y_phosphatase2: Tyrosine phosphatase family; InterPro: IPR004861 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents protein-tyrosine phosphatases predominantly from fungi, plants and bacteria, several of which are putative enzymes. These proteins are closely related to the Y-phosphatase and DSPc families. This entry includes the PTPase SIW14 from Saccharomyces cerevisiae (Baker's yeast), which plays a role in actin filament organisation and endocytosis.; PDB: 2Q47_A 1XRI_A.
Probab=48.87 E-value=29 Score=30.06 Aligned_cols=83 Identities=17% Similarity=0.212 Sum_probs=42.6
Q ss_pred CeEEEecC-CCchhHHHHHHHhCCCCCCeEEEeCCCCCC--CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCC
Q 041829 175 KLVVYASD-QTHSALQKACQIGGIHPQNFRVLKTDSSTN--YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDP 251 (486)
Q Consensus 175 ~~~v~~s~-~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~--~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~ 251 (486)
+.+|.... .........++..|+ +++.++...... ..++.+.+.++++--......|++|....|..-||.+
T Consensus 34 KTII~L~~e~~~~~~~~f~~~~~I---~l~~~~~~~~~~~~~~~~~~~v~~aL~~ild~~n~PvLiHC~~G~~rTG~v-- 108 (164)
T PF03162_consen 34 KTIINLRPEPPSQDFLEFAEENGI---KLIHIPMSSSKDPWVPISEEQVAEALEIILDPRNYPVLIHCNHGKDRTGLV-- 108 (164)
T ss_dssp SEEEE--SS---HHHHHHHHHTT----EEEE-------GGG----HHHHHHHHHHHH-GGG-SEEEE-SSSSSHHHHH--
T ss_pred ceEEEecCCCCCHHHHHHHhhcCc---eEEEeccccccCccccCCHHHHHHHHHHHhCCCCCCEEEEeCCCCcchhhH--
Confidence 34454443 344556677888999 999998875431 2467788887776433333459999999999999975
Q ss_pred hHHHHHHHHHhCCEE
Q 041829 252 LLALGNIAKSNGMWF 266 (486)
Q Consensus 252 l~~I~~ia~~~g~~l 266 (486)
+..-|+..-|-
T Consensus 109 ----vg~lRk~Q~W~ 119 (164)
T PF03162_consen 109 ----VGCLRKLQGWS 119 (164)
T ss_dssp ----HHHHHHHTTB-
T ss_pred ----HHHHHHHcCCC
Confidence 44445555553
No 418
>PRK04147 N-acetylneuraminate lyase; Provisional
Probab=48.50 E-value=27 Score=33.48 Aligned_cols=55 Identities=9% Similarity=0.158 Sum_probs=37.8
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHh-CCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLT-IGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~-~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
|.+. ++.+|.+.+++.++...+ .|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 14 Pf~~--dg~iD~~~~~~li~~l~~~~Gv~gi~v~GstGE~~~Ls~eEr~~~~~~~~~~ 69 (293)
T PRK04147 14 PFDE--DGQIDEQGLRRLVRFNIEKQGIDGLYVGGSTGEAFLLSTEEKKQVLEIVAEE 69 (293)
T ss_pred cCCC--CCCcCHHHHHHHHHHHHhcCCCCEEEECCCccccccCCHHHHHHHHHHHHHH
Confidence 4444 469999999999999888 776655555555555555556666777666554
No 419
>TIGR01275 ACC_deam_rel pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. This model represents a family of pyridoxal phosphate-dependent enzymes closely related to (and often designated as putative examples of) 1-aminocyclopropane-1-carboxylate deaminase. It appears that members of this family include both D-cysteine desulfhydrase (EC 4.4.1.15) and 1-aminocyclopropane-1-carboxylate deaminase (EC 3.5.99.7).
Probab=48.26 E-value=97 Score=29.90 Aligned_cols=55 Identities=18% Similarity=0.077 Sum_probs=32.1
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc-hhHHHHHHHhCCCCCCeEEEeC
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH-SALQKACQIGGIHPQNFRVLKT 207 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H-~s~~~a~~~~g~g~~~v~~v~~ 207 (486)
.+++.|||.+|...-.++-.+.+ | -+.+|+++.... ......++.+|. +++.++-
T Consensus 58 ~vv~~g~ssGN~g~alA~~a~~~------G-~~~~ivvp~~~~~~~~~~~~~~~Ga---~v~~v~~ 113 (311)
T TIGR01275 58 TVITVGAIQSNHARATALAAKKL------G-LDAVLVLREKEELNGNLLLDKLMGA---ETRVYSA 113 (311)
T ss_pred EEEEcCCchhHHHHHHHHHHHHh------C-CceEEEecCCccCCCCHHHHHHcCC---EEEEECc
Confidence 57887776666554333222221 1 356777786432 223445688999 8888764
No 420
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=48.11 E-value=70 Score=33.35 Aligned_cols=63 Identities=13% Similarity=0.130 Sum_probs=44.9
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCEEEeeccccc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMWFHVDAAYAG 274 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~lhvD~A~g~ 274 (486)
+|..++...+ .++.+++.+.|.+. .|-+|.++. .+..+....++++.+|+. ++.+++=|.|..
T Consensus 39 ~V~iiD~~~~---~~~~~~~~~~l~~~-----~pdvVgis~---~t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t 103 (497)
T TIGR02026 39 DVTFLDAMTG---PLTDEKLVERLRAH-----CPDLVLITA---ITPAIYIACETLKFARERLPNAIIVLGGIHPT 103 (497)
T ss_pred ceEEeccccc---CCCHHHHHHHHHhc-----CcCEEEEec---CcccHHHHHHHHHHHHHHCCCCEEEEcCCCcC
Confidence 6777765532 67888888887653 255666654 344566778899999987 899998887754
No 421
>cd00951 KDGDH 5-dehydro-4-deoxyglucarate dehydratase, also called 5-keto-4-deoxy-glucarate dehydratase (KDGDH), which is member of dihydrodipicolinate synthase (DHDPS) family that comprises several pyruvate-dependent class I aldolases. The enzyme is involved in glucarate metabolism, and its mechanism presumbly involves a Schiff-base intermediate similar to members of DHDPS family. While in the case of Pseudomonas sp. 5-dehydro-4-deoxy-D-glucarate is degraded by KDGDH to 2,5-dioxopentanoate, in certain species of Enterobacteriaceae it is degraded instead to pyruvate and glycerate.
Probab=47.70 E-value=62 Score=30.95 Aligned_cols=61 Identities=16% Similarity=0.132 Sum_probs=37.3
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh---CCEEEe
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN---GMWFHV 268 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~---g~~lhv 268 (486)
|.+. ++++|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+. ++.+++
T Consensus 11 Pf~~--dg~iD~~~l~~l~~~l~~~Gv~gi~v~GstGE~~~Ls~eEr~~l~~~~~~~~~~~~pvi~ 74 (289)
T cd00951 11 HFDA--DGSFDEDAYRAHVEWLLSYGAAALFAAGGTGEFFSLTPDEYAQVVRAAVEETAGRVPVLA 74 (289)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHHHhCCCCCEEE
Confidence 4444 359999999999998888775544444444444444445555666655553 355444
No 422
>TIGR01244 conserved hypothetical protein TIGR01244. No member of this family is characterized. The member from Xylella fastidiosa is a longer protein with an N-terminal region described by this model, followed by a metallo-beta-lactamase family domain and an additional C-terminal region. Members scoring above the trusted cutoff are limited to the proteobacteria.
Probab=47.52 E-value=1.1e+02 Score=25.39 Aligned_cols=69 Identities=16% Similarity=0.269 Sum_probs=46.1
Q ss_pred HHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---------CChHHHHHHH
Q 041829 189 QKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---------DPLLALGNIA 259 (486)
Q Consensus 189 ~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---------d~l~~I~~ia 259 (486)
...+...|+ +.+.+|+... .++.+.+++..+- ......|+++-+..|. -+|.. -+.++|.+.+
T Consensus 50 ~~~a~~~gl---~y~~iPv~~~---~~~~~~v~~f~~~-~~~~~~pvL~HC~sG~-Rt~~l~al~~~~~g~~~~~i~~~~ 121 (135)
T TIGR01244 50 KAAAEAAGV---TYHHQPVTAG---DITPDDVETFRAA-IGAAEGPVLAYCRSGT-RSSLLWGFRQAAEGVPVEEIVRRA 121 (135)
T ss_pred HHHHHHCCC---eEEEeecCCC---CCCHHHHHHHHHH-HHhCCCCEEEEcCCCh-HHHHHHHHHHHHcCCCHHHHHHHH
Confidence 356677899 9999998753 5666665443322 2223468888888887 67764 4667888888
Q ss_pred HHhCCE
Q 041829 260 KSNGMW 265 (486)
Q Consensus 260 ~~~g~~ 265 (486)
++.|.-
T Consensus 122 ~~~G~~ 127 (135)
T TIGR01244 122 QAAGYD 127 (135)
T ss_pred HHcCCC
Confidence 877653
No 423
>COG3453 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.89 E-value=83 Score=25.57 Aligned_cols=77 Identities=10% Similarity=0.146 Sum_probs=45.1
Q ss_pred cCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc--------CCh
Q 041829 181 SDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--------DPL 252 (486)
Q Consensus 181 s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--------d~l 252 (486)
+.+...++..+++.+|+ ....||+... .++.++++..-+.--+ -..|++..+-.|+-.+-.. -+.
T Consensus 43 ~QP~~~~i~~aa~~aGl---~y~~iPV~~~---~iT~~dV~~f~~Al~e-aegPVlayCrsGtRs~~ly~~~~~~~gm~~ 115 (130)
T COG3453 43 GQPGFAAIAAAAEAAGL---TYTHIPVTGG---GITEADVEAFQRALDE-AEGPVLAYCRSGTRSLNLYGLGELDGGMSR 115 (130)
T ss_pred CCCChHHHHHHHHhcCC---ceEEeecCCC---CCCHHHHHHHHHHHHH-hCCCEEeeecCCchHHHHHHHHHHhcCCCH
Confidence 34456678889999999 9999999743 6766666544333211 1237776665554332211 234
Q ss_pred HHHHHHHHHhCC
Q 041829 253 LALGNIAKSNGM 264 (486)
Q Consensus 253 ~~I~~ia~~~g~ 264 (486)
++|.++.+.+|+
T Consensus 116 de~~a~g~a~G~ 127 (130)
T COG3453 116 DEIEALGQAAGF 127 (130)
T ss_pred HHHHHHHHhhCc
Confidence 555555555543
No 424
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=46.46 E-value=1.3e+02 Score=30.12 Aligned_cols=66 Identities=18% Similarity=0.202 Sum_probs=36.6
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHH
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAE 222 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~ 222 (486)
+++.++|..+...|-..+++. ...+.+.+. |..++.++......++...-+| ..|.++|.+
T Consensus 4 ilviGaG~Vg~~va~~la~~~----------d~~V~iAdR----s~~~~~~i~~~~~~~v~~~~vD-----~~d~~al~~ 64 (389)
T COG1748 4 ILVIGAGGVGSVVAHKLAQNG----------DGEVTIADR----SKEKCARIAELIGGKVEALQVD-----AADVDALVA 64 (389)
T ss_pred EEEECCchhHHHHHHHHHhCC----------CceEEEEeC----CHHHHHHHHhhccccceeEEec-----ccChHHHHH
Confidence 566666776666666655542 233444443 3344444332211155555555 458889999
Q ss_pred HHHHH
Q 041829 223 AISRD 227 (486)
Q Consensus 223 ~i~~~ 227 (486)
+|++.
T Consensus 65 li~~~ 69 (389)
T COG1748 65 LIKDF 69 (389)
T ss_pred HHhcC
Confidence 88764
No 425
>cd00950 DHDPS Dihydrodipicolinate synthase (DHDPS) is a key enzyme in lysine biosynthesis. It catalyzes the aldol condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a Schiff base formation between pyruvate and a lysine residue. The functional enzyme is a homotetramer consisting of a dimer of dimers. DHDPS is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways.
Probab=46.44 E-value=43 Score=31.88 Aligned_cols=56 Identities=16% Similarity=0.165 Sum_probs=39.1
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
.|.++ ++.+|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+++.+.
T Consensus 10 TPf~~--dg~iD~~~~~~~i~~l~~~Gv~gl~v~GstGE~~~lt~~Er~~l~~~~~~~ 65 (284)
T cd00950 10 TPFKD--DGSVDFDALERLIEFQIENGTDGLVVCGTTGESPTLSDEEHEAVIEAVVEA 65 (284)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCCCcchhhCCHHHHHHHHHHHHHH
Confidence 34444 459999999999998888886666665555555555556667777766665
No 426
>TIGR00381 cdhD CO dehydrogenase/acetyl-CoA synthase, delta subunit. This is the small subunit of a heterodimer which catalyzes the reaction CO + H2O + Acceptor = CO2 + Reduced acceptor and is involved in the synthesis of acetyl-CoA from CO2 and H2.
Probab=45.22 E-value=1.3e+02 Score=29.93 Aligned_cols=65 Identities=18% Similarity=0.078 Sum_probs=42.2
Q ss_pred HHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccC-ChHHHHHHHHHhCCEEEe
Q 041829 190 KACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVD-PLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 190 ~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id-~l~~I~~ia~~~g~~lhv 268 (486)
+.++..++ .++..-+. +-.-|++.|++.++.. +|.+|.+-.++. + +.++++++|++||..+++
T Consensus 182 ~V~~av~v---PLIL~gsg---~~~kD~eVLeaaLe~~--~G~kpLL~SAt~--------e~Ny~~ia~lAk~yg~~Vvv 245 (389)
T TIGR00381 182 DVLQAVDV---PIVIGGSG---NPEKDPLVLEKAAEVA--EGERCLLASANL--------DLDYEKIANAAKKYGHVVLS 245 (389)
T ss_pred HHHHhCCC---CEEEeCCC---CCcCCHHHHHHHHHHh--CCCCcEEEecCc--------hhhHHHHHHHHHHhCCeEEE
Confidence 34444566 55544332 2256999999998765 355565433332 3 799999999999998876
Q ss_pred ec
Q 041829 269 DA 270 (486)
Q Consensus 269 D~ 270 (486)
=+
T Consensus 246 ~s 247 (389)
T TIGR00381 246 WT 247 (389)
T ss_pred Ec
Confidence 54
No 427
>cd00758 MoCF_BD MoCF_BD: molybdenum cofactor (MoCF) binding domain (BD). This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor, like MoaB, MogA, and MoeA. The domain is presumed to bind molybdopterin.
Probab=45.09 E-value=1.2e+02 Score=25.06 Aligned_cols=62 Identities=18% Similarity=0.020 Sum_probs=40.1
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGN 257 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ 257 (486)
..+.+...++..|. ++...++-++ |++.+++++++..++ .- ++++.|.+..|..|-..+..+
T Consensus 20 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~i~~~~~~---~D-lvittGG~g~g~~D~t~~ai~ 81 (133)
T cd00758 20 NGPALEALLEDLGC---EVIYAGVVPD-----DADSIRAALIEASRE---AD-LVLTTGGTGVGRRDVTPEALA 81 (133)
T ss_pred hHHHHHHHHHHCCC---EEEEeeecCC-----CHHHHHHHHHHHHhc---CC-EEEECCCCCCCCCcchHHHHH
Confidence 44556667777888 8877765544 788888888766443 12 444556667777777765444
No 428
>cd00886 MogA_MoaB MogA_MoaB family. Members of this family are involved in biosynthesis of the molybdenum cofactor (MoCF) an essential cofactor of a diverse group of redox enzymes. MoCF biosynthesis is an evolutionarily conserved pathway present in eubacteria, archaea, and eukaryotes. MoCF contains a tricyclic pyranopterin, termed molybdopterin (MPT). MogA, together with MoeA, is responsible for the metal incorporation into MPT, the third step in MoCF biosynthesis. The plant homolog Cnx1 is a MoeA-MogA fusion protein. The mammalian homolog gephyrin is a MogA-MoeA fusion protein, that plays a critical role in postsynaptic anchoring of inhibitory glycine receptors and major GABAa receptor subtypes. In contrast, MoaB shows high similarity to MogA, but little is known about its physiological role. All well studied members of this family form highly stable trimers.
Probab=44.90 E-value=1.2e+02 Score=25.65 Aligned_cols=62 Identities=18% Similarity=0.017 Sum_probs=40.0
Q ss_pred hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHH
Q 041829 186 SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGN 257 (486)
Q Consensus 186 ~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ 257 (486)
+.+...++..|. +++...+-++ |++.+++++++..++ ...- ++++.|.+..|..|-..++.+
T Consensus 23 ~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~-~~~D-lVittGG~s~g~~D~t~~al~ 84 (152)
T cd00886 23 PALVELLEEAGH---EVVAYEIVPD-----DKDEIREALIEWADE-DGVD-LILTTGGTGLAPRDVTPEATR 84 (152)
T ss_pred HHHHHHHHHcCC---eeeeEEEcCC-----CHHHHHHHHHHHHhc-CCCC-EEEECCCcCCCCCcCcHHHHH
Confidence 346667778888 8887776654 788888888765441 0122 444556677788887655443
No 429
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=44.36 E-value=68 Score=30.96 Aligned_cols=60 Identities=13% Similarity=0.063 Sum_probs=43.1
Q ss_pred CccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc-CChHHHHHHHHHhCCEEEeecccc
Q 041829 213 YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV-DPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 213 ~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i-d~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
..++.+++++.++.-.+.- ...-+++.+|+-|.|.- |...++.++|++.|+.+++|..-.
T Consensus 109 p~is~~~~~~~l~~~~~~l-~~~d~VvlsGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg~ 169 (310)
T COG1105 109 PEISEAELEQFLEQLKALL-ESDDIVVLSGSLPPGVPPDAYAELIRILRQQGAKVILDTSGE 169 (310)
T ss_pred CCCCHHHHHHHHHHHHHhc-ccCCEEEEeCCCCCCCCHHHHHHHHHHHHhcCCeEEEECChH
Confidence 4678888777666543311 11235667788888877 457999999999999999997643
No 430
>TIGR01361 DAHP_synth_Bsub phospho-2-dehydro-3-deoxyheptonate aldolase. The member of this family from Synechocystis PCC 6803, CcmA, was shown to be essential for carboxysome formation. However, no other candidate for this enzyme is present in that species, chorismate biosynthesis does occur, other species having this protein lack carboxysomes but appear to make chorismate, and a requirement of CcmA for carboxysome formation does not prohibit a role in chorismate biosynthesis.
Probab=43.11 E-value=2.9e+02 Score=25.97 Aligned_cols=83 Identities=19% Similarity=0.069 Sum_probs=55.8
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccc-cc---cCChHHHHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSS-TA---VDPLLALGNIA 259 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~t-G~---id~l~~I~~ia 259 (486)
.+..+.+.+...|. .+.+... ...++++++.+++.-.+.|..- +++.-.|++.+ +. .-++..|..+.
T Consensus 120 ~n~~LL~~~a~~gk----PVilk~G----~~~t~~e~~~Ave~i~~~Gn~~-i~l~~rG~s~y~~~~~~~~dl~~i~~lk 190 (260)
T TIGR01361 120 QNFELLKEVGKQGK----PVLLKRG----MGNTIEEWLYAAEYILSSGNGN-VILCERGIRTFEKATRNTLDLSAVPVLK 190 (260)
T ss_pred cCHHHHHHHhcCCC----cEEEeCC----CCCCHHHHHHHHHHHHHcCCCc-EEEEECCCCCCCCCCcCCcCHHHHHHHH
Confidence 35566666655555 4455532 1348999999998887766543 33333345333 43 35789999999
Q ss_pred HHhCCEEEeeccccch
Q 041829 260 KSNGMWFHVDAAYAGS 275 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~ 275 (486)
+.+++.+.+|..|.++
T Consensus 191 ~~~~~pV~~ds~Hs~G 206 (260)
T TIGR01361 191 KETHLPIIVDPSHAAG 206 (260)
T ss_pred HhhCCCEEEcCCCCCC
Confidence 8899999999998765
No 431
>cd00952 CHBPH_aldolase Trans-o-hydroxybenzylidenepyruvate hydratase-aldolase (HBPHA) and trans-2'-carboxybenzalpyruvate hydratase-aldolase (CBPHA). HBPHA catalyzes HBP to salicyaldehyde and pyruvate. This reaction is part of the degradative pathways for naphthalene and naphthalenesulfonates by bacteria. CBPHA is homologous to HBPHA and catalyzes the cleavage of CBP to 2-carboxylbenzaldehyde and pyruvate during the degradation of phenanthrene. They are member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=42.67 E-value=55 Score=31.66 Aligned_cols=51 Identities=14% Similarity=0.139 Sum_probs=37.5
Q ss_pred CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 212 NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 212 ~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
++.+|.+.+++.++...+.|-.-+++..+.|...+=..+.-.++.+.+.+.
T Consensus 23 ~g~iD~~~l~~lv~~li~~Gv~Gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 73 (309)
T cd00952 23 TDTVDLDETARLVERLIAAGVDGILTMGTFGECATLTWEEKQAFVATVVET 73 (309)
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcccccchhCCHHHHHHHHHHHHHH
Confidence 369999999999999888886656666666666655666677777766653
No 432
>TIGR03249 KdgD 5-dehydro-4-deoxyglucarate dehydratase. 5-dehydro-4-deoxyglucarate dehydratase not only catalyzes the dehydration of the substrate (diol to ketone + water), but causes the decarboxylation of the intermediate product to yield 2-oxoglutarate semialdehyde (2,5-dioxopentanoate). The gene for the enzyme is usually observed in the vicinity of transporters and dehydratases handling D-galactarate and D-gluconate as well as aldehyde dehydrogenases which convert the product to alpha-ketoglutarate.
Probab=42.64 E-value=46 Score=31.99 Aligned_cols=56 Identities=23% Similarity=0.162 Sum_probs=37.9
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
.|.+.+ +.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 15 TPf~~d--g~iD~~~l~~li~~l~~~Gv~gi~v~GstGE~~~Lt~eEr~~v~~~~~~~ 70 (296)
T TIGR03249 15 TPFDAD--GSFDEAAYRENIEWLLGYGLEALFAAGGTGEFFSLTPAEYEQVVEIAVST 70 (296)
T ss_pred CCcCCC--CCcCHHHHHHHHHHHHhcCCCEEEECCCCcCcccCCHHHHHHHHHHHHHH
Confidence 355543 58999999999988888776655555555555555556666777665553
No 433
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=42.64 E-value=61 Score=28.94 Aligned_cols=51 Identities=16% Similarity=0.132 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
....-|.+++=..-.|..|..|++..-+ ..|..-+.+++.++|++||+.++
T Consensus 135 R~GhtEaavdLa~lAGl~p~avi~eil~-~dG~~~~~~~~~~fA~~~~l~~v 185 (194)
T PF00926_consen 135 RRGHTEAAVDLARLAGLSPVAVICEILD-DDGDMARRDELEEFAKKHGLPIV 185 (194)
T ss_dssp SSSHHHHHHHHHHHTTS-SBEEEEEBBE-TTSSBHCHHHHHHHHHHTT-EEE
T ss_pred CCChHHHHHHHHHHhCCCCcEEEEEEeC-CCCCcCCHHHHHHHHHHcCCcEE
Confidence 4445666666666788889888877764 48999999999999999999875
No 434
>PRK03170 dihydrodipicolinate synthase; Provisional
Probab=42.38 E-value=56 Score=31.25 Aligned_cols=57 Identities=12% Similarity=0.063 Sum_probs=37.4
Q ss_pred EEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 204 VLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 204 ~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
..|.++ ++.+|.+.+++.++...+.|-..+++..+.|.-..=..+.-.++.+.+.+.
T Consensus 10 ~TPf~~--dg~iD~~~l~~~i~~l~~~Gv~gi~~~Gs~GE~~~ls~~Er~~~~~~~~~~ 66 (292)
T PRK03170 10 VTPFKE--DGSVDFAALRKLVDYLIANGTDGLVVVGTTGESPTLTHEEHEELIRAVVEA 66 (292)
T ss_pred eCCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECCcCCccccCCHHHHHHHHHHHHHH
Confidence 345554 459999999999998888886665555555554444455566666655553
No 435
>PRK03620 5-dehydro-4-deoxyglucarate dehydratase; Provisional
Probab=41.42 E-value=56 Score=31.53 Aligned_cols=54 Identities=17% Similarity=0.117 Sum_probs=34.9
Q ss_pred eCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 206 KTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 206 ~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
|.+. ++.+|.+.+++.++...++|-.-+++..+.|...+=..+.-.++.+.+.+
T Consensus 18 Pf~~--dg~iD~~~l~~li~~l~~~Gv~Gi~~~GstGE~~~Lt~eEr~~~~~~~~~ 71 (303)
T PRK03620 18 PFDA--DGSFDEAAYREHLEWLAPYGAAALFAAGGTGEFFSLTPDEYSQVVRAAVE 71 (303)
T ss_pred CCCC--CCCcCHHHHHHHHHHHHHcCCCEEEECcCCcCcccCCHHHHHHHHHHHHH
Confidence 4443 45999999999999888877554454444444444444555666665544
No 436
>cd00408 DHDPS-like Dihydrodipicolinate synthase family. A member of the class I aldolases, which use an active-site lysine which stablilzes a reaction intermediate via Schiff base formation, and have TIM beta/alpha barrel fold. The dihydrodipicolinate synthase family comprises several pyruvate-dependent class I aldolases that use the same catalytic step to catalyze different reactions in different pathways and includes such proteins as N-acetylneuraminate lyase, MosA protein, 5-keto-4-deoxy-glucarate dehydratase, trans-o-hydroxybenzylidenepyruvate hydratase-aldolase, trans-2'-carboxybenzalpyruvate hydratase-aldolase, and 2-keto-3-deoxy- gluconate aldolase. The family is also referred to as the N-acetylneuraminate lyase (NAL) family.
Probab=40.78 E-value=46 Score=31.61 Aligned_cols=57 Identities=11% Similarity=0.066 Sum_probs=35.4
Q ss_pred EEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 204 VLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 204 ~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
..|.+++ +.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 6 ~TPf~~d--g~iD~~~~~~~i~~l~~~Gv~gi~~~GstGE~~~ls~~Er~~l~~~~~~~ 62 (281)
T cd00408 6 VTPFTAD--GEVDLDALRRLVEFLIEAGVDGLVVLGTTGEAPTLTDEERKEVIEAVVEA 62 (281)
T ss_pred eCCcCCC--CCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHH
Confidence 4455554 59999999999998887775544444444433333345556666655553
No 437
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=40.54 E-value=2.2e+02 Score=26.03 Aligned_cols=100 Identities=13% Similarity=0.128 Sum_probs=61.2
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC-----c----hhHHHHHHHhCCCCCCeEEEeCCCCCCC
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT-----H----SALQKACQIGGIHPQNFRVLKTDSSTNY 213 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~-----H----~s~~~a~~~~g~g~~~v~~v~~~~~~~~ 213 (486)
..+.|||..+++.+..+.+... .......+.++.. | ......++.+|+ .++..+++.. .
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~-------eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi---~l~~~~~~g~--~ 71 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGH-------EVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGI---PLVTFDTSGE--E 71 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCC-------eeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCC---ceEEEecCcc--c
Confidence 5678889999766555444310 0012222333322 2 234556777899 8888887642 2
Q ss_pred ccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc---CChHHHHHHHHHhCCEE
Q 041829 214 SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV---DPLLALGNIAKSNGMWF 266 (486)
Q Consensus 214 ~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i---d~l~~I~~ia~~~g~~l 266 (486)
.-..++|.++++...-. .|+ +|+| +-...+-.+|++.|+..
T Consensus 72 e~eve~L~~~l~~l~~d-----~iv-------~GaI~s~yqk~rve~lc~~lGl~~ 115 (223)
T COG2102 72 EREVEELKEALRRLKVD-----GIV-------AGAIASEYQKERVERLCEELGLKV 115 (223)
T ss_pred hhhHHHHHHHHHhCccc-----EEE-------EchhhhHHHHHHHHHHHHHhCCEE
Confidence 55788888888775421 232 4666 45788889999998875
No 438
>PRK05872 short chain dehydrogenase; Provisional
Probab=40.01 E-value=2.6e+02 Score=26.51 Aligned_cols=66 Identities=12% Similarity=-0.002 Sum_probs=37.3
Q ss_pred EEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 177 VVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 177 ~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
++++.. .........+.++.+ ..+..+++| --|.+.+++.+++..+....+-+|+.++|....+.+
T Consensus 36 V~~~~r-~~~~l~~~~~~l~~~-~~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~ 101 (296)
T PRK05872 36 LALVDL-EEAELAALAAELGGD-DRVLTVVAD-----VTDLAAMQAAAEEAVERFGGIDVVVANAGIASGGSV 101 (296)
T ss_pred EEEEeC-CHHHHHHHHHHhcCC-CcEEEEEec-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCcCc
Confidence 344433 333444445545432 256666676 448888888887654432335677777776555544
No 439
>PF00701 DHDPS: Dihydrodipicolinate synthetase family; InterPro: IPR002220 Dihydropicolinate synthase (DHDPS) is the key enzyme in lysine biosynthesis via the diaminopimelate pathway of prokaryotes, some phycomycetes and higher plants. The enzyme catalyses the condensation of L-aspartate-beta- semialdehyde and pyruvate to dihydropicolinic acid via a ping-pong mechanism in which pyruvate binds to the enzyme by forming a Schiff-base with a lysine residue []. Three other proteins are structurally related to DHDPS and probably also act via a similar catalytic mechanism. These are Escherichia coli N-acetylneuraminate lyase (4.1.3.3 from EC) (gene nanA), which catalyzes the condensation of N-acetyl-D-mannosamine and pyruvate to form N-acetylneuraminate; Rhizobium meliloti (Sinorhizobium meliloti) protein mosA [], which is involved in the biosynthesis of the rhizopine 3-o-methyl-scyllo-inosamine; and E. coli hypothetical protein yjhH. The sequences of DHDPS from different sources are well-conserved. The structure takes the form of a homotetramer, in which 2 monomers are related by an approximate 2-fold symmetry []. Each monomer comprises 2 domains: an 8-fold alpha-/beta-barrel, and a C-terminal alpha-helical domain. The fold resembles that of N-acetylneuraminate lyase. The active site lysine is located in the barrel domain, and has access via 2 channels on the C-terminal side of the barrel.; GO: 0016829 lyase activity, 0008152 metabolic process; PDB: 3B4U_B 3S8H_A 3QZE_B 1XXX_F 3L21_F 3IRD_A 3A5F_B 3G0S_B 3DAQ_C 3UQN_A ....
Probab=40.01 E-value=59 Score=31.03 Aligned_cols=57 Identities=16% Similarity=0.082 Sum_probs=36.1
Q ss_pred CCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh---CCEEEe
Q 041829 212 NYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN---GMWFHV 268 (486)
Q Consensus 212 ~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~---g~~lhv 268 (486)
++.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+++.++ ++.+++
T Consensus 16 dg~id~~~~~~~i~~l~~~Gv~gl~~~GstGE~~~Lt~~Er~~l~~~~~~~~~~~~~vi~ 75 (289)
T PF00701_consen 16 DGSIDEDALKRLIDFLIEAGVDGLVVLGSTGEFYSLTDEERKELLEIVVEAAAGRVPVIA 75 (289)
T ss_dssp TSSB-HHHHHHHHHHHHHTTSSEEEESSTTTTGGGS-HHHHHHHHHHHHHHHTTSSEEEE
T ss_pred CcCcCHHHHHHHHHHHHHcCCCEEEECCCCcccccCCHHHHHHHHHHHHHHccCceEEEe
Confidence 358999999999988887776655555555554444556666777776553 355544
No 440
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=39.96 E-value=94 Score=30.24 Aligned_cols=76 Identities=21% Similarity=0.243 Sum_probs=53.2
Q ss_pred HHHHhCCCCCCeEEEeCCCCCCCccCHHHHH-HHHHHHHhCCCccEEEEEecC--CccccccCChHHHHHHHHHhC----
Q 041829 191 ACQIGGIHPQNFRVLKTDSSTNYSLSPDSLA-EAISRDLTIGLIPFFLCATVG--TTSSTAVDPLLALGNIAKSNG---- 263 (486)
Q Consensus 191 a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~-~~i~~~~~~g~~p~~vv~~~~--~t~tG~id~l~~I~~ia~~~g---- 263 (486)
-++.+|+ .++.-+ . .-||.++. .+++..+++|.. ++++=|+| .|.....+.|++|.+++++..
T Consensus 189 w~er~gv---~vI~~~--~----G~DpAaVafDAi~~Akar~~D-vvliDTAGRLhnk~nLM~EL~KI~rV~~k~~~~ap 258 (340)
T COG0552 189 WGERLGV---PVISGK--E----GADPAAVAFDAIQAAKARGID-VVLIDTAGRLHNKKNLMDELKKIVRVIKKDDPDAP 258 (340)
T ss_pred HHHHhCC---eEEccC--C----CCCcHHHHHHHHHHHHHcCCC-EEEEeCcccccCchhHHHHHHHHHHHhccccCCCC
Confidence 3445677 555432 2 34777554 777777777765 46777887 677888899999999999875
Q ss_pred --CEEEeeccccchh
Q 041829 264 --MWFHVDAAYAGSA 276 (486)
Q Consensus 264 --~~lhvD~A~g~~~ 276 (486)
+++..|+.-|--.
T Consensus 259 ~e~llvlDAttGqna 273 (340)
T COG0552 259 HEILLVLDATTGQNA 273 (340)
T ss_pred ceEEEEEEcccChhH
Confidence 6777799876544
No 441
>PLN02417 dihydrodipicolinate synthase
Probab=39.32 E-value=69 Score=30.49 Aligned_cols=56 Identities=9% Similarity=0.031 Sum_probs=38.4
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-|.++ ++.+|.+.+++.++...+.|-.-+++..+.|...+=..+.-.++.+.+.+.
T Consensus 11 TPf~~--~g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~ls~~Er~~~~~~~~~~ 66 (280)
T PLN02417 11 TPYLP--DGRFDLEAYDSLVNMQIENGAEGLIVGGTTGEGQLMSWDEHIMLIGHTVNC 66 (280)
T ss_pred CCcCC--CCCcCHHHHHHHHHHHHHcCCCEEEECccCcchhhCCHHHHHHHHHHHHHH
Confidence 45554 359999999999998888876656666666655555556666676665553
No 442
>TIGR00177 molyb_syn molybdenum cofactor synthesis domain. The Drosophila protein cinnamon, the Arabidopsis protein cnx1, and rat protein gephyrin each have one domain like MoeA and one like MoaB and Mog. These domains are, however, distantly related to each other, as captured by this model. Gephyrin is unusual in that it seems to be a tubulin-binding neuroprotein involved in the clustering of both blycine receptors and GABA receptors, rather than a protein of molybdenum cofactor biosynthesis.
Probab=38.87 E-value=1.9e+02 Score=24.22 Aligned_cols=62 Identities=16% Similarity=0.146 Sum_probs=40.6
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGN 257 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ 257 (486)
.-+.+...++.+|. ++....+-.+ |.+.|.+++++..++ .-+|+.+ |.+..|..|-..+..+
T Consensus 28 n~~~l~~~l~~~G~---~v~~~~~v~D-----d~~~i~~~l~~~~~~---~DliItt-GG~g~g~~D~t~~ai~ 89 (144)
T TIGR00177 28 NGPLLAALLEEAGF---NVSRLGIVPD-----DPEEIREILRKAVDE---ADVVLTT-GGTGVGPRDVTPEALE 89 (144)
T ss_pred cHHHHHHHHHHCCC---eEEEEeecCC-----CHHHHHHHHHHHHhC---CCEEEEC-CCCCCCCCccHHHHHH
Confidence 44567777888898 8887776544 678888888765432 2245555 5566677777655444
No 443
>TIGR00674 dapA dihydrodipicolinate synthase. Dihydrodipicolinate synthase is a homotetrameric enzyme of lysine biosynthesis. E. coli has several paralogs closely related to dihydrodipicoline synthase (DapA), as well as the more distant N-acetylneuraminate lyase. In Pyrococcus horikoshii, the bidirectional best hit with E. coli is to an uncharacterized paralog of DapA, not DapA itself, and it is omitted from the seed. The putative members from the Chlamydias (pathogens with a parasitic metabolism) are easily the most divergent members of the multiple alignment.
Probab=38.83 E-value=61 Score=30.89 Aligned_cols=58 Identities=10% Similarity=0.059 Sum_probs=38.6
Q ss_pred EEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 203 RVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 203 ~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
...|.+++ +.+|.+.+++.++...+.|-..+++..+.|....=..+.-.++.+.+.+.
T Consensus 6 ~~TPf~~~--g~iD~~~~~~~i~~l~~~Gv~Gi~~~GstGE~~~Ls~~Er~~~~~~~~~~ 63 (285)
T TIGR00674 6 LITPFKED--GSVDFAALEKLIDFQIENGTDAIVVVGTTGESPTLSHEEHKKVIEFVVDL 63 (285)
T ss_pred eeCCcCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHHH
Confidence 34466554 58999999999988887776665555555555544555566666665554
No 444
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=38.42 E-value=3e+02 Score=25.27 Aligned_cols=42 Identities=12% Similarity=0.189 Sum_probs=25.9
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST 247 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG 247 (486)
++..+.+| ..|.+.+++.+++..+.-..+-.++.++|....+
T Consensus 56 ~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~iD~lv~~ag~~~~~ 97 (251)
T PRK12481 56 KFHFITAD-----LIQQKDIDSIVSQAVEVMGHIDILINNAGIIRRQ 97 (251)
T ss_pred eEEEEEeC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCC
Confidence 67777777 4578888888876543322344566666654433
No 445
>PRK06114 short chain dehydrogenase; Provisional
Probab=38.39 E-value=2.8e+02 Score=25.38 Aligned_cols=39 Identities=15% Similarity=0.043 Sum_probs=24.4
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
++..+++| --|.+.+++.+++..+....+-.++.++|..
T Consensus 59 ~~~~~~~D-----~~~~~~i~~~~~~~~~~~g~id~li~~ag~~ 97 (254)
T PRK06114 59 RAIQIAAD-----VTSKADLRAAVARTEAELGALTLAVNAAGIA 97 (254)
T ss_pred ceEEEEcC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCC
Confidence 66777776 3478888888776544322344666666643
No 446
>TIGR01536 asn_synth_AEB asparagine synthase (glutamine-hydrolyzing). This model describes the glutamine-hydrolysing asparagine synthase. A poorly conserved C-terminal extension was removed from the model. Bacterial members of the family tend to have a long, poorly conserved insert lacking from archaeal and eukaryotic sequences. Multiple isozymes have been demonstrated, such as in Bacillus subtilis. Long-branch members of the phylogenetic tree (which typically were also second or third candidate members from their genomes) were removed from the seed alignment and score below trusted cutoff.
Probab=38.38 E-value=4.6e+02 Score=26.95 Aligned_cols=123 Identities=18% Similarity=0.191 Sum_probs=65.9
Q ss_pred hHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEe---c-CCCch---
Q 041829 114 ATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYA---S-DQTHS--- 186 (486)
Q Consensus 114 ~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~---s-~~~H~--- 186 (486)
..++++.+.+-+.+.+..+.. -|++.|||-.+.+.+..+++.. .+ .+...++ + .....
T Consensus 235 ~e~l~~~l~~aV~~r~~~~~~-------vg~~LSGGlDSs~iaa~a~~~~--~~------~~~~~~t~~~~~~~~~~E~~ 299 (467)
T TIGR01536 235 VDELRSLLEDAVKRRLVADVP-------VGVLLSGGLDSSLVAAIARREA--PR------GPVHTFSIGFEGSPDFDESP 299 (467)
T ss_pred HHHHHHHHHHHHHHHhccCCc-------eEEEecCChhHHHHHHHHHHhc--CC------CCceEEEEecCCCCCCChHH
Confidence 345666666666666543332 4889999998876665544321 00 1222222 2 11122
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
-..+.|+.+|+ +...+.+++ +.+.+.+.+.......|. .. ...-++-.+.+.++++|+.+
T Consensus 300 ~A~~vA~~lg~---~~~~i~~~~--------~~~~~~~~~~v~~~~~p~--------~~-~~~~~~~~l~~~a~~~G~~v 359 (467)
T TIGR01536 300 YARKVADHLGT---EHHEVLFSV--------EEGLDALPEVIYHLEDPT--------TI-RASIPLYLLSKLAREDGVKV 359 (467)
T ss_pred HHHHHHHHhCC---cCeEEECCH--------HHHHHHHHHHHHhhCCCC--------CC-chHHHHHHHHHHHHhcCCEE
Confidence 45667888898 777776653 223333333221111121 11 12235567888899999998
Q ss_pred Eeecc
Q 041829 267 HVDAA 271 (486)
Q Consensus 267 hvD~A 271 (486)
+.+|-
T Consensus 360 lltG~ 364 (467)
T TIGR01536 360 VLSGE 364 (467)
T ss_pred EEecC
Confidence 88763
No 447
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=38.22 E-value=3.9e+02 Score=27.17 Aligned_cols=95 Identities=15% Similarity=0.181 Sum_probs=52.6
Q ss_pred CeEEEecCCC-chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHH-HHHHHHHHhCCCccEEEEEecCCc--cccccC
Q 041829 175 KLVVYASDQT-HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSL-AEAISRDLTIGLIPFFLCATVGTT--SSTAVD 250 (486)
Q Consensus 175 ~~~v~~s~~~-H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L-~~~i~~~~~~g~~p~~vv~~~~~t--~tG~id 250 (486)
..+.+++... -++..+-.+.++-.. .+-.++.+. .-||-++ +++++....++.. ++||=|+|-. .....+
T Consensus 129 ~kvllVaaD~~RpAA~eQL~~La~q~-~v~~f~~~~----~~~Pv~Iak~al~~ak~~~~D-vvIvDTAGRl~ide~Lm~ 202 (451)
T COG0541 129 KKVLLVAADTYRPAAIEQLKQLAEQV-GVPFFGSGT----EKDPVEIAKAALEKAKEEGYD-VVIVDTAGRLHIDEELMD 202 (451)
T ss_pred CceEEEecccCChHHHHHHHHHHHHc-CCceecCCC----CCCHHHHHHHHHHHHHHcCCC-EEEEeCCCcccccHHHHH
Confidence 3344444444 455555555554311 222333321 3466544 6778777666544 4577777632 223335
Q ss_pred ChHHHHHHHHHhCCEEEeeccccch
Q 041829 251 PLLALGNIAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 251 ~l~~I~~ia~~~g~~lhvD~A~g~~ 275 (486)
.+.+|.++.+-.-+.+++|+.-|--
T Consensus 203 El~~Ik~~~~P~E~llVvDam~GQd 227 (451)
T COG0541 203 ELKEIKEVINPDETLLVVDAMIGQD 227 (451)
T ss_pred HHHHHHhhcCCCeEEEEEecccchH
Confidence 5666666666678999999987643
No 448
>PLN02672 methionine S-methyltransferase
Probab=38.05 E-value=5.2e+02 Score=29.94 Aligned_cols=141 Identities=11% Similarity=0.111 Sum_probs=80.6
Q ss_pred cCccccccChhhHHHHHHHHHHHHHHcCCCCCCcCCCCCCeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEE---
Q 041829 103 IVGFSWITSPAATELEMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVY--- 179 (486)
Q Consensus 103 ~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~~~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~--- 179 (486)
.....|+.-.+...+.+.+...+...++.|-. ..+.++.++-..|+..++.. +. ++..++
T Consensus 417 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~----~~--------~~~~~~~~~ 479 (1082)
T PLN02672 417 LSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLT-----PDNVVVFPSRAVAIENALRL----FS--------PRLAIVDEH 479 (1082)
T ss_pred CCCCCCCCCccchHHHHHHHHHHHHhcCCcCC-----ccceEEeccHHHHHHHHHHh----hC--------hHHHhhhhh
Confidence 44556666667889999999999999998764 23577777766665444432 10 111010
Q ss_pred ecCCCchhHHHHHHHhCCCC-----CCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHH
Q 041829 180 ASDQTHSALQKACQIGGIHP-----QNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLA 254 (486)
Q Consensus 180 ~s~~~H~s~~~a~~~~g~g~-----~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~ 254 (486)
.+..-|..+..+...-|.+. +.+..+.... +-| .+.+.|++-+ |.+|+.....-..-.-.-++.
T Consensus 480 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 548 (1082)
T PLN02672 480 LTRWLPKKWLTSLAIENATSDSKSDDVITVIEAPR----QSD--LVIELIKKLK-----PQVVVTGMADFEMRTSTAFEH 548 (1082)
T ss_pred hhccCCHHHHhHhhhhcccccCccCCeEEEEeCCC----cch--HHHHHHHhCC-----CeEEEEeccchhhhhHHHHHH
Confidence 23334445555555544221 1333333221 223 4556665543 555555443322222245788
Q ss_pred HHHHHHHhCCEEEeecc
Q 041829 255 LGNIAKSNGMWFHVDAA 271 (486)
Q Consensus 255 I~~ia~~~g~~lhvD~A 271 (486)
|.+++++.|+|+..|.+
T Consensus 549 ~~~~~~~~~~~~~~~~~ 565 (1082)
T PLN02672 549 LLNVTAEIGARLFLDIS 565 (1082)
T ss_pred HHHHHHhhCcEEEEehh
Confidence 99999999999999964
No 449
>smart00852 MoCF_biosynth Probable molybdopterin binding domain. This domain is found a variety of proteins involved in biosynthesis of molybdopterin cofactor. The domain is presumed to bind molybdopterin. The structure of this domain is known, and it forms an alpha/beta structure. In the known structure of Gephyrin this domain mediates trimerisation.
Probab=38.03 E-value=1.9e+02 Score=23.71 Aligned_cols=61 Identities=18% Similarity=0.111 Sum_probs=39.2
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALG 256 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~ 256 (486)
..+.+.+.++.+|. +++...+-++ |.+.+++.+++..+. .-+|+.+ |.+..|..|-..+..
T Consensus 19 ~~~~l~~~l~~~G~---~~~~~~~v~D-----d~~~I~~~l~~~~~~---~dliitt-GG~g~g~~D~t~~~l 79 (135)
T smart00852 19 NGPALAELLTELGI---EVTRYVIVPD-----DKEAIKEALREALER---ADLVITT-GGTGPGPDDVTPEAV 79 (135)
T ss_pred cHHHHHHHHHHCCC---eEEEEEEeCC-----CHHHHHHHHHHHHhC---CCEEEEc-CCCCCCCCcCcHHHH
Confidence 44567777888888 7766555433 788888888776543 2244444 555567777766644
No 450
>PRK12595 bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase; Reviewed
Probab=38.02 E-value=3.2e+02 Score=27.10 Aligned_cols=82 Identities=15% Similarity=0.028 Sum_probs=51.9
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccc---cc-CChHHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSST---AV-DPLLALGNIAK 260 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG---~i-d~l~~I~~ia~ 260 (486)
+..+.+.+...|. ++.+... ...++++++.+++.-.+.|..- +++.-.|++.+. .- -++..|..+.+
T Consensus 214 n~~LL~~~a~~gk----PVilk~G----~~~t~~e~~~Ave~i~~~Gn~~-i~L~erg~s~yp~~~~~~ldl~~i~~lk~ 284 (360)
T PRK12595 214 NFELLKAAGRVNK----PVLLKRG----LSATIEEFIYAAEYIMSQGNGQ-IILCERGIRTYEKATRNTLDISAVPILKQ 284 (360)
T ss_pred CHHHHHHHHccCC----cEEEeCC----CCCCHHHHHHHHHHHHHCCCCC-EEEECCccCCCCCCCCCCcCHHHHHHHHH
Confidence 4455555444444 3444432 1269999999998877766543 233322443221 11 38999999999
Q ss_pred HhCCEEEeeccccch
Q 041829 261 SNGMWFHVDAAYAGS 275 (486)
Q Consensus 261 ~~g~~lhvD~A~g~~ 275 (486)
++++.+.+|..|.++
T Consensus 285 ~~~~PV~~d~~Hs~G 299 (360)
T PRK12595 285 ETHLPVMVDVTHSTG 299 (360)
T ss_pred HhCCCEEEeCCCCCc
Confidence 999999999998765
No 451
>PF06153 DUF970: Protein of unknown function (DUF970); InterPro: IPR010375 This is a family of uncharacterised bacterial proteins.; PDB: 3M05_A.
Probab=37.61 E-value=89 Score=24.98 Aligned_cols=51 Identities=24% Similarity=0.339 Sum_probs=33.7
Q ss_pred hHHHHHHHHHHHccCcEE--EEee-eE--CCEeEEEEEecCCCCCHHHHHHHHHHHHHHHH
Q 041829 422 NKLNHKLLDDINSTGKIF--ISHT-VL--SGKYILRFAVGAPLTEWRHVNAAWEVMQDKAS 477 (486)
Q Consensus 422 ~~~~~~l~~~l~~~g~~~--~~~~-~~--~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~ 477 (486)
+++...+.+.|.++|... ++.+ .+ .|...+-+.+ .+++++++++.|++.++
T Consensus 10 d~Da~~l~~~L~~~g~~~TkLsstGGFLr~GNtTlliGv-----ede~v~~vl~iIk~~c~ 65 (109)
T PF06153_consen 10 DEDADDLSDALNENGFRVTKLSSTGGFLREGNTTLLIGV-----EDEKVDEVLEIIKENCK 65 (109)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEEETTTTEEEEEEEEEE-----EGGGHHHHHHHHHHHH-
T ss_pred HhhHHHHHHHHHHCCceEEEEecccceeccCCEEEEEEe-----cHHHHHHHHHHHHHhhc
Confidence 566788999999988322 1111 11 2445666666 78899999999988765
No 452
>COG1504 Uncharacterized conserved protein [Function unknown]
Probab=37.19 E-value=58 Score=25.88 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=38.4
Q ss_pred CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 213 YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 213 ~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
..+++++|+..+.+... .|++ ||..+|.+.=.++..+++++.++-+++-
T Consensus 47 Hkl~~eEle~~lee~~E------~ivv--GTG~~G~l~l~~ea~e~~r~k~~~vi~~ 95 (121)
T COG1504 47 HKLALEELEELLEEGPE------VIVV--GTGQSGMLELSEEAREFFRKKGCEVIEL 95 (121)
T ss_pred cccCHHHHHHHHhcCCc------EEEE--ecCceeEEEeCHHHHHHHHhcCCeEEEe
Confidence 48999999999987643 3333 4557899999999999999999776654
No 453
>PF00289 CPSase_L_chain: Carbamoyl-phosphate synthase L chain, N-terminal domain; InterPro: IPR005481 Carbamoyl phosphate synthase (CPSase) is a heterodimeric enzyme composed of a small and a large subunit (with the exception of CPSase III, see below). CPSase catalyses the synthesis of carbamoyl phosphate from biocarbonate, ATP and glutamine (6.3.5.5 from EC) or ammonia (6.3.4.16 from EC), and represents the first committed step in pyrimidine and arginine biosynthesis in prokaryotes and eukaryotes, and in the urea cycle in most terrestrial vertebrates [, ]. CPSase has three active sites, one in the small subunit and two in the large subunit. The small subunit contains the glutamine binding site and catalyses the hydrolysis of glutamine to glutamate and ammonia. The large subunit has two homologous carboxy phosphate domains, both of which have ATP-binding sites; however, the N-terminal carboxy phosphate domain catalyses the phosphorylation of biocarbonate, while the C-terminal domain catalyses the phosphorylation of the carbamate intermediate []. The carboxy phosphate domain found duplicated in the large subunit of CPSase is also present as a single copy in the biotin-dependent enzymes acetyl-CoA carboxylase (6.4.1.2 from EC) (ACC), propionyl-CoA carboxylase (6.4.1.3 from EC) (PCCase), pyruvate carboxylase (6.4.1.1 from EC) (PC) and urea carboxylase (6.3.4.6 from EC). Most prokaryotes carry one form of CPSase that participates in both arginine and pyrimidine biosynthesis, however certain bacteria can have separate forms. The large subunit in bacterial CPSase has four structural domains: the carboxy phosphate domain 1, the oligomerisation domain, the carbamoyl phosphate domain 2 and the allosteric domain []. CPSase heterodimers from Escherichia coli contain two molecular tunnels: an ammonia tunnel and a carbamate tunnel. These inter-domain tunnels connect the three distinct active sites, and function as conduits for the transport of unstable reaction intermediates (ammonia and carbamate) between successive active sites []. The catalytic mechanism of CPSase involves the diffusion of carbamate through the interior of the enzyme from the site of synthesis within the N-terminal domain of the large subunit to the site of phosphorylation within the C-terminal domain. Eukaryotes have two distinct forms of CPSase: a mitochondrial enzyme (CPSase I) that participates in both arginine biosynthesis and the urea cycle; and a cytosolic enzyme (CPSase II) involved in pyrimidine biosynthesis. CPSase II occurs as part of a multi-enzyme complex along with aspartate transcarbamoylase and dihydroorotase; this complex is referred to as the CAD protein []. The hepatic expression of CPSase is transcriptionally regulated by glucocorticoids and/or cAMP []. There is a third form of the enzyme, CPSase III, found in fish, which uses glutamine as a nitrogen source instead of ammonia []. CPSase III is closely related to CPSase I, and is composed of a single polypeptide that may have arisen from gene fusion of the glutaminase and synthetase domains []. This entry represents the N-terminal domain of the large subunit of carbamoyl phosphate synthase. This domain can also be found in certain other related proteins. ; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 3VA7_A 3OUU_A 3OUZ_B 1W96_B 1W93_A 1ULZ_A 3HB9_C 3HO8_A 3BG5_C 3HBL_A ....
Probab=37.01 E-value=69 Score=25.64 Aligned_cols=31 Identities=26% Similarity=0.263 Sum_probs=17.7
Q ss_pred CCccccccCChHHHHHHHHHhCCEEEeeccccchh
Q 041829 242 GTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSA 276 (486)
Q Consensus 242 ~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~ 276 (486)
+.+..-..-++++|.++|++.| +|+.|+|..
T Consensus 53 ~~~~~~~yl~~e~I~~ia~~~g----~~~i~pGyg 83 (110)
T PF00289_consen 53 PGPSPESYLNIEAIIDIARKEG----ADAIHPGYG 83 (110)
T ss_dssp SSSGGGTTTSHHHHHHHHHHTT----ESEEESTSS
T ss_pred cchhhhhhccHHHHhhHhhhhc----Ccccccccc
Confidence 3444445566777777777763 455555533
No 454
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=36.90 E-value=54 Score=30.44 Aligned_cols=97 Identities=16% Similarity=0.134 Sum_probs=53.6
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc--h--hH---HHHHHHhCCCCCCeEEEeCCCCCCCcc
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH--S--AL---QKACQIGGIHPQNFRVLKTDSSTNYSL 215 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H--~--s~---~~a~~~~g~g~~~v~~v~~~~~~~~~i 215 (486)
.+..|||..+.+.|..+.-.. +..++.+....- + ++ ...|+..|+ +...++++ .|
T Consensus 21 ~vAfSGGvDSslLa~la~~~l----------G~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi---~H~~i~~~-----~~ 82 (269)
T COG1606 21 VVAFSGGVDSSLLAKLAKEAL----------GDNVVAVTVDSPYIPRREIEEAKNIAKEIGI---RHEFIKMN-----RM 82 (269)
T ss_pred EEEecCCccHHHHHHHHHHHh----------ccceEEEEEecCCCChhhhhHHHHHHHHhCC---cceeeehh-----hc
Confidence 677788888877765543221 222222221111 1 22 345566788 88888876 55
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
+++--+. ...++++ +--.=.+.|.+.++++|.-+++||+.+.
T Consensus 83 ~~~~~~n--------~~~rCY~---------CK~~v~~~l~~~a~~~Gyd~V~dGtNas 124 (269)
T COG1606 83 DPEFKEN--------PENRCYL---------CKRAVYSTLVEEAEKRGYDVVADGTNAS 124 (269)
T ss_pred chhhccC--------CCCcchH---------HHHHHHHHHHHHHHHcCCCEEEeCCcHH
Confidence 5322111 1011111 1113357889999999999999998764
No 455
>TIGR00506 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal.
Probab=36.85 E-value=97 Score=27.78 Aligned_cols=51 Identities=12% Similarity=0.042 Sum_probs=39.5
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEE
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFH 267 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lh 267 (486)
....-|..++=..-.|..|..|++..- +..|..-..+++.++|++||+.++
T Consensus 140 R~GhTEaavdL~~lAGl~p~~vicEil-~~dG~m~~~~~~~~fA~~~~l~~i 190 (199)
T TIGR00506 140 RGGHTEASVDLAELAGLKPAGVICEMM-NDDGTMARKPELMEYAKKHNLKLI 190 (199)
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCcEE
Confidence 444456666666667888888777774 457999999999999999999873
No 456
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=36.72 E-value=1.2e+02 Score=29.29 Aligned_cols=80 Identities=13% Similarity=0.149 Sum_probs=58.6
Q ss_pred EEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHH
Q 041829 177 VVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALG 256 (486)
Q Consensus 177 ~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~ 256 (486)
-.++++..-.+..+..++-.- -...||+-...+..|+-+.+++...+.. -.+|+.+...+.++++.
T Consensus 77 d~IVpEiEAI~td~L~elE~~---G~~VVP~ArAt~ltMnRegiRrlAAeeL-----------glpTs~Y~fa~s~~e~~ 142 (394)
T COG0027 77 DYIVPEIEAIATDALVELEEE---GYTVVPNARATKLTMNREGIRRLAAEEL-----------GLPTSKYRFADSLEELR 142 (394)
T ss_pred CeeeehhhhhhHHHHHHHHhC---CceEccchHHHHhhhcHHHHHHHHHHHh-----------CCCCccccccccHHHHH
Confidence 355576666666665554433 2246887655567999999999877653 24677888889999999
Q ss_pred HHHHHhCCEEEeec
Q 041829 257 NIAKSNGMWFHVDA 270 (486)
Q Consensus 257 ~ia~~~g~~lhvD~ 270 (486)
+.|++-|+..+|--
T Consensus 143 ~a~~~iGfPcvvKP 156 (394)
T COG0027 143 AAVEKIGFPCVVKP 156 (394)
T ss_pred HHHHHcCCCeeccc
Confidence 99999999998874
No 457
>PRK10638 glutaredoxin 3; Provisional
Probab=36.45 E-value=1.7e+02 Score=21.52 Aligned_cols=68 Identities=15% Similarity=0.227 Sum_probs=39.9
Q ss_pred CeEEEecCCCchh--HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCCh
Q 041829 175 KLVVYASDQTHSA--LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPL 252 (486)
Q Consensus 175 ~~~v~~s~~~H~s--~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l 252 (486)
+.++|....+.++ +...+...|+ ....++++.+ .+ ..+.+.+.......|.+++ +....|-.+++
T Consensus 3 ~v~ly~~~~Cp~C~~a~~~L~~~gi---~y~~~dv~~~------~~-~~~~l~~~~g~~~vP~i~~---~g~~igG~~~~ 69 (83)
T PRK10638 3 NVEIYTKATCPFCHRAKALLNSKGV---SFQEIPIDGD------AA-KREEMIKRSGRTTVPQIFI---DAQHIGGCDDL 69 (83)
T ss_pred cEEEEECCCChhHHHHHHHHHHcCC---CcEEEECCCC------HH-HHHHHHHHhCCCCcCEEEE---CCEEEeCHHHH
Confidence 4567877777666 4456777788 7888888642 22 2334444444556675433 23455666665
Q ss_pred HHH
Q 041829 253 LAL 255 (486)
Q Consensus 253 ~~I 255 (486)
.++
T Consensus 70 ~~~ 72 (83)
T PRK10638 70 YAL 72 (83)
T ss_pred HHH
Confidence 544
No 458
>TIGR01274 ACC_deam 1-aminocyclopropane-1-carboxylate deaminase. This pyridoxal phosphate-dependent enzyme degrades 1-aminocyclopropane-1-carboxylate, which in plants is a precursor of the ripening hormone ethylene, to ammonia and alpha-ketoglutarate. This model includes all members of this family for which function has been demonstrated experimentally, but excludes a closely related family often annotated as putative members of this family.
Probab=36.26 E-value=2.1e+02 Score=28.05 Aligned_cols=56 Identities=13% Similarity=0.026 Sum_probs=31.8
Q ss_pred eEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCC--------chhHHHHHHHhCCCCCCeEEEeCC
Q 041829 143 GVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQT--------HSALQKACQIGGIHPQNFRVLKTD 208 (486)
Q Consensus 143 ~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~--------H~s~~~a~~~~g~g~~~v~~v~~~ 208 (486)
.+++.|||.+|.....++-.+. .| -+.+|+++... ........+.+|. +++.++.+
T Consensus 68 ~vvs~ggs~gN~g~alA~~a~~------~G-l~~~iv~~~~~~~~~~~~~~~~~~~~~~~~GA---~v~~v~~~ 131 (337)
T TIGR01274 68 TLVSIGGIQSNQTRQVAAVAAH------LG-MKCVLVQENWVNYSDAVYDRVGNIQLSRIMGA---DVRLDPDG 131 (337)
T ss_pred EEEECCCCcchHHHHHHHHHHH------cC-CcEEEEeccCCCccccchhccchHHHHHHcCC---EEEEeCCc
Confidence 5667666666654433322222 11 24566766532 1245556788999 99988854
No 459
>TIGR00334 5S_RNA_mat_M5 ribonuclease M5. This family of orthologous proteins shows a weak but significant similarity to the central region of the DnaG-type DNA primase. The region of similarity is termed the Toprim (topoisomerase-primase) domain and is also shared by RecR, OLD family nucleases, and type IA and II topoisomerases.
Probab=36.15 E-value=43 Score=29.20 Aligned_cols=53 Identities=15% Similarity=0.227 Sum_probs=39.3
Q ss_pred CccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchh
Q 041829 213 YSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSA 276 (486)
Q Consensus 213 ~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~ 276 (486)
|+-|...|+++++.+ ++.|.|+.. ..+-++.|.+..++.|+.+..|.=++|--
T Consensus 10 GK~D~~~lk~~~d~~---------~I~T~Gs~i--~~~~i~~i~~~~~~rgVIIfTDpD~~Gek 62 (174)
T TIGR00334 10 GKDDQARIKQAFDVD---------VIETNGSAL--KDETINLIKKAQKKQGVIILTDPDFPGEK 62 (174)
T ss_pred cchHHHHHHHhcCce---------EEEECCCcc--CHHHHHHHHHHhhcCCEEEEeCCCCchHH
Confidence 377899998888532 666666542 33458888888999999999998887743
No 460
>PRK13396 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=35.62 E-value=3.2e+02 Score=27.04 Aligned_cols=83 Identities=13% Similarity=0.022 Sum_probs=55.0
Q ss_pred chhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCC-----ccccccCChHHHHHHH
Q 041829 185 HSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGT-----TSSTAVDPLLALGNIA 259 (486)
Q Consensus 185 H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~-----t~tG~id~l~~I~~ia 259 (486)
++.+.+.+...|. .+.+... ...+++++..+++.-.+.|.. -++++-.|. +++-..-|+..|..+.
T Consensus 197 n~~LL~~va~t~k----PVllk~G----~~~t~ee~~~A~e~i~~~Gn~-~viL~erG~rtf~s~y~~~~~dl~ai~~lk 267 (352)
T PRK13396 197 NFSLLKKVGAQDK----PVLLKRG----MAATIDEWLMAAEYILAAGNP-NVILCERGIRTFDRQYTRNTLDLSVIPVLR 267 (352)
T ss_pred CHHHHHHHHccCC----eEEEeCC----CCCCHHHHHHHHHHHHHcCCC-eEEEEecCCccCcCCCCCCCcCHHHHHHHH
Confidence 4555555544444 4455532 245999999999887666653 344444433 2233456899999998
Q ss_pred HHhCCEEEeeccccchh
Q 041829 260 KSNGMWFHVDAAYAGSA 276 (486)
Q Consensus 260 ~~~g~~lhvD~A~g~~~ 276 (486)
+.+++.+++|.+|+.+.
T Consensus 268 ~~~~lPVi~DpsH~~G~ 284 (352)
T PRK13396 268 SLTHLPIMIDPSHGTGK 284 (352)
T ss_pred HhhCCCEEECCcccCCc
Confidence 88899999999998753
No 461
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=35.05 E-value=30 Score=36.83 Aligned_cols=43 Identities=16% Similarity=0.014 Sum_probs=35.6
Q ss_pred CCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccch
Q 041829 231 GLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGS 275 (486)
Q Consensus 231 g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~ 275 (486)
|+.+ +-.=++++..|.-++++++++-|++.||-+++|-.++-+
T Consensus 197 GYq~--~g~yAp~sryGtPedfk~fVD~aH~~GIgViLD~V~~HF 239 (628)
T COG0296 197 GYQG--TGYYAPTSRYGTPEDFKALVDAAHQAGIGVILDWVPNHF 239 (628)
T ss_pred CCCc--ceeccccccCCCHHHHHHHHHHHHHcCCEEEEEecCCcC
Confidence 5554 334567889999999999999999999999999887643
No 462
>PF05913 DUF871: Bacterial protein of unknown function (DUF871); InterPro: IPR008589 This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown though a number are annotated as outer surface proteins.; PDB: 2P0O_A 1X7F_A.
Probab=35.05 E-value=52 Score=32.57 Aligned_cols=58 Identities=19% Similarity=0.168 Sum_probs=37.9
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCc-cccccCChHHHHHHHHHhCCEEEeecccc
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTT-SSTAVDPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t-~tG~id~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
+.++.++-|++..+.|..-++..+..+.. ..-..+.+++|.++|+++|+.+++|-.-.
T Consensus 12 ~~~~~~~yi~~a~~~Gf~~iFTSL~ipe~~~~~~~~~~~~l~~~a~~~~~~v~~Disp~ 70 (357)
T PF05913_consen 12 SFEENKAYIEKAAKYGFKRIFTSLHIPEDDPEDYLERLKELLKLAKELGMEVIADISPK 70 (357)
T ss_dssp -HHHHHHHHHHHHCTTEEEEEEEE---------HHHHHHHHHHHHHHCT-EEEEEE-CC
T ss_pred CHHHHHHHHHHHHHCCCCEEECCCCcCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCHH
Confidence 78888899998888886654444444442 23445778999999999999999997543
No 463
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=34.98 E-value=48 Score=27.27 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=28.7
Q ss_pred ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEe
Q 041829 214 SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHV 268 (486)
Q Consensus 214 ~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhv 268 (486)
.++.+.-++.+++--+ ...| +|+++.+. +|-+++.++|+++++.+..
T Consensus 64 ~l~~~~r~~~l~~l~~-~~~P-~iIvt~~~------~~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 64 SLDEEERKERLEKLFS-YNPP-CIIVTRGL------EPPPELIELAEKYNIPLLR 110 (127)
T ss_dssp CS-HHHHCCHHHHHCT-TT-S--EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HCCHHHHHHHHHHHhC-CCCC-EEEEECcC------CCCHHHHHHHHHhCCcEEE
Confidence 6788888888877654 2334 56666543 7789999999999998754
No 464
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=34.89 E-value=2.8e+02 Score=26.45 Aligned_cols=49 Identities=20% Similarity=0.183 Sum_probs=33.5
Q ss_pred ccCHHHHHHHHHHHHhCCCccEEEEEecCCc-cccccCC-----------hHHHHHHHHHhCCEEE
Q 041829 214 SLSPDSLAEAISRDLTIGLIPFFLCATVGTT-SSTAVDP-----------LLALGNIAKSNGMWFH 267 (486)
Q Consensus 214 ~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t-~tG~id~-----------l~~I~~ia~~~g~~lh 267 (486)
-.|++.+++.+++.+ |-+||-++..| ....-.+ -.-|++.|++.|++++
T Consensus 36 itd~~~v~~~i~~~~-----PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~ga~lV 96 (281)
T COG1091 36 ITDPDAVLEVIRETR-----PDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEVGARLV 96 (281)
T ss_pred ccChHHHHHHHHhhC-----CCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHhCCeEE
Confidence 558889999998753 66666666544 4444444 1367889999998853
No 465
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=34.88 E-value=1.2e+02 Score=27.49 Aligned_cols=76 Identities=18% Similarity=0.170 Sum_probs=43.6
Q ss_pred CeEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHH
Q 041829 175 KLVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLA 254 (486)
Q Consensus 175 ~~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~ 254 (486)
..++++.. .........+..|+ +++ ..|. -|.+.|.++++... .|+...+.......+--..
T Consensus 24 ~V~~l~R~-~~~~~~~~l~~~g~---~vv--~~d~-----~~~~~l~~al~g~d-------~v~~~~~~~~~~~~~~~~~ 85 (233)
T PF05368_consen 24 SVRALVRD-PSSDRAQQLQALGA---EVV--EADY-----DDPESLVAALKGVD-------AVFSVTPPSHPSELEQQKN 85 (233)
T ss_dssp CEEEEESS-SHHHHHHHHHHTTT---EEE--ES-T-----T-HHHHHHHHTTCS-------EEEEESSCSCCCHHHHHHH
T ss_pred CcEEEEec-cchhhhhhhhcccc---eEe--eccc-----CCHHHHHHHHcCCc-------eEEeecCcchhhhhhhhhh
Confidence 44455444 43334445566777 665 4442 28899999987532 3444444333444455678
Q ss_pred HHHHHHHhCCEEEe
Q 041829 255 LGNIAKSNGMWFHV 268 (486)
Q Consensus 255 I~~ia~~~g~~lhv 268 (486)
+++-|++.|+..+|
T Consensus 86 li~Aa~~agVk~~v 99 (233)
T PF05368_consen 86 LIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHT-SEEE
T ss_pred HHHhhhccccceEE
Confidence 88899999876655
No 466
>PF01301 Glyco_hydro_35: Glycosyl hydrolases family 35; InterPro: IPR001944 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 35 GH35 from CAZY comprises enzymes with only one known activity; beta-galactosidase (3.2.1.23 from EC). Mammalian beta-galactosidase is a lysosomal enzyme (gene GLB1) which cleaves the terminal galactose from gangliosides, glycoproteins, and glycosaminoglycans and whose deficiency is the cause of the genetic disease Gm(1) gangliosidosis (Morquio disease type B).; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3OGS_A 3OGV_A 3OGR_A 3OG2_A 1TG7_A 1XC6_A 3THC_C 3THD_D 3D3A_A 4E8D_B ....
Probab=34.85 E-value=71 Score=31.11 Aligned_cols=20 Identities=20% Similarity=0.365 Sum_probs=16.4
Q ss_pred CChHHHHHHHHHhCCEEEee
Q 041829 250 DPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 250 d~l~~I~~ia~~~g~~lhvD 269 (486)
.||.+..++|+++|+++++-
T Consensus 63 ~dl~~f~~~a~~~gl~vilr 82 (319)
T PF01301_consen 63 RDLDRFLDLAQENGLYVILR 82 (319)
T ss_dssp G-HHHHHHHHHHTT-EEEEE
T ss_pred hhHHHHHHHHHHcCcEEEec
Confidence 68999999999999998876
No 467
>PF12818 Tegument_dsDNA: dsDNA viral tegument protein; InterPro: IPR024346 This entry represents the N-terminal domain of tegument proteins from double-stranded DNA herpesvirus.
Probab=34.63 E-value=3.7e+02 Score=25.68 Aligned_cols=26 Identities=23% Similarity=0.264 Sum_probs=20.7
Q ss_pred cccc-cCChHHHHHHHHHhCCEEEeec
Q 041829 245 SSTA-VDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 245 ~tG~-id~l~~I~~ia~~~g~~lhvD~ 270 (486)
+++. +.|++.|..+|+.+|+.+++=|
T Consensus 248 ~~~~~~~~l~~L~~~c~~~gc~~~iLG 274 (282)
T PF12818_consen 248 NTDQGFGPLDALKRACRLCGCPVHILG 274 (282)
T ss_pred cccccccHHHHHHHHHHHCCCCEEEEe
Confidence 3454 4899999999999999988643
No 468
>TIGR02667 moaB_proteo molybdenum cofactor biosynthesis protein B, proteobacterial. This model represents the MoaB protein molybdopterin biosynthesis regions in Proteobacteria. This crystallized but incompletely characterized protein is thought to be involved in, though not required for, early steps in molybdopterin biosynthesis. It may bind a molybdopterin precursor. A distinctive conserved motif PCN near the C-terminus helps distinguish this clade from other homologs, including sets of proteins designated MogA.
Probab=34.59 E-value=2.4e+02 Score=24.27 Aligned_cols=62 Identities=11% Similarity=-0.063 Sum_probs=40.3
Q ss_pred CchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHh-CCCccEEEEEecCCccccccCChHHHH
Q 041829 184 THSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLT-IGLIPFFLCATVGTTSSTAVDPLLALG 256 (486)
Q Consensus 184 ~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~-~g~~p~~vv~~~~~t~tG~id~l~~I~ 256 (486)
..+.+...++..|. ++..+.+-++ |.+.+++++++..+ ++ .- ++++.|.+..|..|-..+..
T Consensus 23 n~~~l~~~L~~~G~---~v~~~~iv~D-----d~~~i~~~l~~~~~~~~--~D-lVIttGGtg~g~~D~t~eal 85 (163)
T TIGR02667 23 SGQYLVERLTEAGH---RLADRAIVKD-----DIYQIRAQVSAWIADPD--VQ-VILITGGTGFTGRDVTPEAL 85 (163)
T ss_pred cHHHHHHHHHHCCC---eEEEEEEcCC-----CHHHHHHHHHHHHhcCC--CC-EEEECCCcCCCCCCCcHHHH
Confidence 44566667777888 7777766554 77888888876532 22 12 44455667788888765543
No 469
>TIGR02313 HpaI-NOT-DapA 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase. This model represents a subset of the DapA (dihydrodipicolinate synthase) family which has apparently evolved a separate function. The product of DapA, dihydrodipicolinate, results from the non-enzymatic cyclization and dehydration of 6-amino-2,4-dihydroxyhept-2-ene-1,7-dioic acid, which is different from the substrate of this reaction only in the presence of the amino group. In the absence of this amino group, and running the reaction in the opposite direction, the reaction corresponds to the HpaI aldolase component of the 4-hydroxyphenylacetic acid catabolism pathway (see TIGR02311). At present, this variant of DapA is found only in Oceanobacillus iheyensis HTE831 and Thermus thermophilus HB27. In both of these cases, one or more other DapA genes can be found and the one identified by this model is part of an operon for 4-hydroxyphenylacetic acid catabolism.
Probab=34.48 E-value=72 Score=30.61 Aligned_cols=56 Identities=14% Similarity=0.080 Sum_probs=37.2
Q ss_pred EEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHH
Q 041829 204 VLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKS 261 (486)
Q Consensus 204 ~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~ 261 (486)
.-|.+.+ +.+|.+.+++.++...++|-.-+++..+.|...+=..+.-.++.+.+.+
T Consensus 9 ~TPf~~d--g~iD~~~l~~lv~~~~~~Gv~gi~v~GstGE~~~Ls~~Er~~l~~~~~~ 64 (294)
T TIGR02313 9 ITPFKRN--GDIDEEALRELIEFQIEGGSHAISVGGTSGEPGSLTLEERKQAIENAID 64 (294)
T ss_pred eCCcCCC--CCcCHHHHHHHHHHHHHcCCCEEEECccCcccccCCHHHHHHHHHHHHH
Confidence 3455544 5999999999999988888665555555555444455566666665544
No 470
>TIGR00683 nanA N-acetylneuraminate lyase. N-acetylneuraminate lyase is also known as N-acetylneuraminic acid aldolase, sialic acid aldolase, or sialate lyase. It is an intracellular enzyme. The structure of this homotetrameric enzyme related to dihydrodipicolinate synthase is known. In Clostridium tertium, the enzyme appears to be in an operon with a secreted sialidase that releases sialic acid from host sialoglycoconjugates. In several E. coli strains, however, this enzyme is responsible for N-acetyl-D-neuraminic acid synthesis for capsule production by condensing N-acetyl-D-mannosamine and pyruvate.
Probab=34.39 E-value=75 Score=30.40 Aligned_cols=56 Identities=11% Similarity=0.173 Sum_probs=35.3
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCC-CccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIG-LIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g-~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-|.+. ++++|.+.+++.++.....| -.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 10 TPf~~--dg~iD~~~~~~~i~~~i~~G~v~gi~~~GstGE~~~Lt~eEr~~~~~~~~~~ 66 (290)
T TIGR00683 10 VSFNE--DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDE 66 (290)
T ss_pred cCCCC--CCCcCHHHHHHHHHHHHhCCCcCEEEECCcccccccCCHHHHHHHHHHHHHH
Confidence 34554 45999999999999888777 5544444444444444445555666655553
No 471
>PF00128 Alpha-amylase: Alpha amylase, catalytic domain; InterPro: IPR006047 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Enzymes containing this domain, such as alpha-amylase, belong to family 13 (GH13 from CAZY) of the glycosyl hydrolases. The maltogenic alpha-amylase is an enzyme which catalyses hydrolysis of (1-4)-alpha-D-glucosidic linkages in polysaccharides so as to remove successive alpha-maltose residues from the non-reducing ends of the chains in the conversion of starch to maltose. Other enzymes include neopullulanase, which hydrolyses pullulan to panose, and cyclomaltodextrinase, which hydrolyses cyclodextrins. This entry represents the catalytic domain found in several protein members of this family. It has a structure consisting of an 8 stranded alpha/beta barrel that contains the active site, interrupted by a ~70 amino acid calcium-binding domain protruding between beta strand 3 and alpha helix 3, and a carboxyl-terminal Greek key beta-barrel domain []. More information about this protein can be found at Protein of the Month: alpha-Amylase [].; GO: 0003824 catalytic activity, 0043169 cation binding, 0005975 carbohydrate metabolic process; PDB: 3FAX_A 3FAW_A 2DH3_B 2DH2_A 1CIU_A 1A47_A 3BMW_A 3BMV_A 2FH8_A 2FH6_A ....
Probab=34.38 E-value=26 Score=33.36 Aligned_cols=33 Identities=12% Similarity=0.095 Sum_probs=28.6
Q ss_pred cCCccccccCChHHHHHHHHHhCCEEEeecccc
Q 041829 241 VGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 241 ~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
...+..|..++++++++.||++|+.+++|-+..
T Consensus 43 ~vd~~~Gt~~d~~~Lv~~~h~~gi~VilD~V~N 75 (316)
T PF00128_consen 43 AVDPRFGTMEDFKELVDAAHKRGIKVILDVVPN 75 (316)
T ss_dssp EESTTTBHHHHHHHHHHHHHHTTCEEEEEEETS
T ss_pred ccccccchhhhhhhhhhccccccceEEEeeecc
Confidence 356678999999999999999999999998654
No 472
>PF01645 Glu_synthase: Conserved region in glutamate synthase; InterPro: IPR002932 Ferredoxin-dependent glutamate synthases have been implicated in a number of functions including photorespiration in Arabidopsis where they may also play a role in primary nitrogen assimilation in roots []. This region is expressed as a seperate subunit in the glutamate synthase alpha subunit from archaebacteria, or part of a large multidomain enzyme in other organisms. The aligned region of these proteins contains a putative FMN binding site and Fe-S cluster.; GO: 0015930 glutamate synthase activity, 0016638 oxidoreductase activity, acting on the CH-NH2 group of donors, 0006537 glutamate biosynthetic process, 0055114 oxidation-reduction process; PDB: 1EA0_A 2VDC_E 1OFE_A 1LLW_A 1OFD_A 1LLZ_A 1LM1_A.
Probab=33.58 E-value=2.2e+02 Score=28.36 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=42.4
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCC-CccEEEEEecCCccccccCChHHHHHHHHHhCC-
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIG-LIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM- 264 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g-~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~- 264 (486)
-..+.+++.++....-...|....+ .-++++|.+.|.+-++.+ ..|+.|=+..+ ++++.+...+-+.++
T Consensus 159 V~~~ia~~R~~~~g~~~iSP~~h~d--i~s~edl~~~I~~Lr~~~~~~pVgvKl~~~-------~~~~~~~~~~~~ag~D 229 (368)
T PF01645_consen 159 VTEEIARIRGVPPGVDLISPPPHHD--IYSIEDLAQLIEELRELNPGKPVGVKLVAG-------RGVEDIAAGAAKAGAD 229 (368)
T ss_dssp --HHHHHHHTS-TT--EE--SS-TT---SSHHHHHHHHHHHHHH-TTSEEEEEEE-S-------TTHHHHHHHHHHTT-S
T ss_pred chHHHHHHhCCCCCCccccCCCCCC--cCCHHHHHHHHHHHHhhCCCCcEEEEECCC-------CcHHHHHHhhhhccCC
Confidence 3455666767644333344444322 568899999998876544 66766654432 456677775555554
Q ss_pred EEEeeccccchh
Q 041829 265 WFHVDAAYAGSA 276 (486)
Q Consensus 265 ~lhvD~A~g~~~ 276 (486)
.+++||+.||..
T Consensus 230 ~ItIDG~~GGTG 241 (368)
T PF01645_consen 230 FITIDGAEGGTG 241 (368)
T ss_dssp EEEEE-TT---S
T ss_pred EEEEeCCCCCCC
Confidence 678999888743
No 473
>cd01991 Asn_Synthase_B_C The C-terminal domain of Asparagine Synthase B. This domain is always found associated n-terminal amidotransferase domain. Family members that contain this domain catalyse the conversion of aspartate to asparagine. Asparagine synthetase B catalyzes the assembly of asparagine from aspartate, Mg(2+)ATP, and glutamine. The three-dimensional architecture of the N-terminal domain of asparagine synthetase B is similar to that observed for glutamine phosphoribosylpyrophosphate amidotransferase while the molecular motif of the C-domain is reminiscent to that observed for GMP synthetase .
Probab=33.51 E-value=3.9e+02 Score=24.73 Aligned_cols=106 Identities=19% Similarity=0.212 Sum_probs=57.0
Q ss_pred CeEEcCchhHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCc---hhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHH
Q 041829 142 GGVIQGTASEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTH---SALQKACQIGGIHPQNFRVLKTDSSTNYSLSPD 218 (486)
Q Consensus 142 ~~~~t~ggt~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H---~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~ 218 (486)
-|++.|||-.+...+..+++... ....-..+....... .-..+.++.+|+ +...+.++ .+
T Consensus 18 v~~~LSGGlDSs~va~~~~~~~~------~~~~~~~~~~~~~~~~e~~~a~~~a~~l~~---~~~~~~~~--------~~ 80 (269)
T cd01991 18 VGVLLSGGLDSSLVAALAARLLP------EPVKTFSIGFGFEGSDEREYARRVAEHLGT---EHHEVEFT--------PA 80 (269)
T ss_pred eEEeecccHHHHHHHHHHHHhhC------CCCceEEEeeCCCCCChHHHHHHHHHHhCC---cceEEEcC--------HH
Confidence 48999999988777666554421 000111222121111 235567888888 77777654 23
Q ss_pred HHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeecccc
Q 041829 219 SLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYA 273 (486)
Q Consensus 219 ~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g 273 (486)
.+.+.+.........|. .....-++-.+++.++++++.++++|-.|
T Consensus 81 ~~~~~~~~~~~~~~~p~---------~~~~~~~~~~l~~~a~~~~~~v~l~G~g~ 126 (269)
T cd01991 81 DLLAALPDVIWELDEPF---------ADSSAIPLYLLSRLARKHGIKVVLSGEGA 126 (269)
T ss_pred HHHHHHHHHHHHhCCCC---------CCcHHHHHHHHHHHHHHhCCEEEEecCCc
Confidence 33333332211111121 11122466788999999998888887543
No 474
>COG1954 GlpP Glycerol-3-phosphate responsive antiterminator (mRNA-binding) [Transcription]
Probab=33.31 E-value=45 Score=28.90 Aligned_cols=48 Identities=15% Similarity=0.234 Sum_probs=34.9
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC--CEEEeeccccc
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG--MWFHVDAAYAG 274 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g--~~lhvD~A~g~ 274 (486)
|..+|+++++.+.+ +|++ -+|.+-.|+++.+..++.| +++|||=..|.
T Consensus 12 ~~~~le~~les~~~------~vfl-----L~~~i~~ik~ivk~lK~~gK~vfiHvDLv~Gl 61 (181)
T COG1954 12 DNKDLEKALESESQ------YVFL-----LTGHILNIKEIVKKLKNRGKTVFIHVDLVEGL 61 (181)
T ss_pred hHHHHHHHhcCCCe------EEEE-----EechhhhHHHHHHHHHhCCcEEEEEeHHhccc
Confidence 56677777766533 3443 3577889999999999986 67999965543
No 475
>PRK05876 short chain dehydrogenase; Provisional
Probab=33.02 E-value=4e+02 Score=24.90 Aligned_cols=44 Identities=5% Similarity=0.018 Sum_probs=27.4
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV 249 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i 249 (486)
++..+++| --|.+.+++.+++..+....+-+++-++|....|.+
T Consensus 56 ~~~~~~~D-----v~d~~~v~~~~~~~~~~~g~id~li~nAg~~~~~~~ 99 (275)
T PRK05876 56 DVHGVMCD-----VRHREEVTHLADEAFRLLGHVDVVFSNAGIVVGGPI 99 (275)
T ss_pred eEEEEeCC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcCCCCCc
Confidence 67777776 347888888877654433334567777765544444
No 476
>cd00954 NAL N-Acetylneuraminic acid aldolase, also called N-acetylneuraminate lyase (NAL), which catalyses the reversible aldol reaction of N-acetyl-D-mannosamine and pyruvate to give N-acetyl-D-neuraminic acid (D-sialic acid). It has a widespread application as biocatalyst for the synthesis of sialic acid and its derivatives. This enzyme has been shown to be quite specific for pyruvate as the donor, but flexible to a variety of D- and, to some extent, L-hexoses and pentoses as acceptor substrates. NAL is member of dihydrodipicolinate synthase family that comprises several pyruvate-dependent class I aldolases.
Probab=32.66 E-value=95 Score=29.65 Aligned_cols=56 Identities=14% Similarity=0.181 Sum_probs=36.0
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhC-CCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTI-GLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~-g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-|.++ ++.+|.+.+++.++...+. |-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 10 TPf~~--dg~iD~~~~~~~i~~l~~~~Gv~gi~~~GstGE~~~Lt~~Er~~~~~~~~~~ 66 (288)
T cd00954 10 TPFDE--NGEINEDVLRAIVDYLIEKQGVDGLYVNGSTGEGFLLSVEERKQIAEIVAEA 66 (288)
T ss_pred CCCCC--CCCCCHHHHHHHHHHHHhcCCCCEEEECcCCcCcccCCHHHHHHHHHHHHHH
Confidence 34554 4599999999999988887 76655555554544444445555666655553
No 477
>PF03599 CdhD: CO dehydrogenase/acetyl-CoA synthase delta subunit; InterPro: IPR016041 This entry represents a conserved region predicted to form a TIM alpha/beta barrel, and is found in the delta subunit of a number of CO dehydrogenase/acetyl-CoA synthase enzymes.; PDB: 2H9A_B 2YCL_B 4DJF_E 4DJD_C 4DJE_C.
Probab=32.59 E-value=1.6e+02 Score=29.38 Aligned_cols=45 Identities=27% Similarity=0.365 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
|++.|+++++.. ++.+|.+-.+|. ++.++++++|++||..+.+=+
T Consensus 107 D~evl~aale~~--~~~kpLL~aAt~--------eNyk~m~~lA~~y~~pl~v~s 151 (386)
T PF03599_consen 107 DPEVLKAALEAC--AGKKPLLYAATE--------ENYKAMAALAKEYGHPLIVSS 151 (386)
T ss_dssp HHHHHHHHHHHT--TTS--EEEEEBT--------TTHHHHHHHHHHCT-EEEEE-
T ss_pred CHHHHHHHHHHh--CcCCcEEeEcCH--------HHHHHHHHHHHHcCCeEEEEe
Confidence 888888887654 345566554443 468888888888888877643
No 478
>PRK08265 short chain dehydrogenase; Provisional
Probab=32.55 E-value=4e+02 Score=24.53 Aligned_cols=60 Identities=13% Similarity=-0.046 Sum_probs=33.3
Q ss_pred eEEEecCCCchhHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 176 LVVYASDQTHSALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 176 ~~v~~s~~~H~s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
.+++++.. .....+....++. ++..+++| -.|.+.+++.++...+.-..+-+++.+++..
T Consensus 32 ~V~~~~r~-~~~~~~~~~~~~~---~~~~~~~D-----l~~~~~~~~~~~~~~~~~g~id~lv~~ag~~ 91 (261)
T PRK08265 32 RVAIVDID-ADNGAAVAASLGE---RARFIATD-----ITDDAAIERAVATVVARFGRVDILVNLACTY 91 (261)
T ss_pred EEEEEeCC-HHHHHHHHHHhCC---eeEEEEec-----CCCHHHHHHHHHHHHHHhCCCCEEEECCCCC
Confidence 34444432 2334444444454 67777877 3477888887776544322344566666543
No 479
>cd07021 Clp_protease_NfeD_like Nodulation formation efficiency D (NfeD) is a membrane-bound ClpP-class protease. Nodulation formation efficiency D (NfeD; stomatin operon partner protein, STOPP; DUF107) is a member of membrane-anchored ClpP-class proteases. Currently, more than 300 NfeD homologs have been identified - all of which are bacterial or archaeal in origin. Majority of these genomes have been shown to possess operons containing a homologous NfeD/stomatin gene pair, causing NfeD to be previously named STOPP (stomatin operon partner protein). NfeD homologs can be divided into two groups: long and short forms. Long-form homologs have a putative ClpP-class serine protease domain while the short form homologs do not. Downstream from the ClpP-class domain is the so-called NfeD or DUF107 domain. N-terminal region of the NfeD homolog PH1510 (1510-N or PH1510-N) from Pyrococcus horikoshii has been shown to possess serine protease activity and has a Ser-Lys catalytic dyad, preferentiall
Probab=32.15 E-value=1.2e+02 Score=26.57 Aligned_cols=76 Identities=17% Similarity=0.121 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhC--CEEEeec-cccchhccCccchhcccCCcCCC
Q 041829 217 PDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNG--MWFHVDA-AYAGSACICPEYRQYIDGVEEAD 293 (486)
Q Consensus 217 ~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g--~~lhvD~-A~g~~~~~~~~~~~~~~~~~~aD 293 (486)
.+.|++.|++..+.+... |++.. +|+-|.++...+|.+..++.. +...|++ |.+++.+.+- .+|
T Consensus 15 ~~~l~~~l~~a~~~~~~~--ivl~i-nspGG~v~~~~~I~~~l~~~~~pvva~V~g~AaSaG~~ia~----------a~d 81 (178)
T cd07021 15 AAFVERALKEAKEEGADA--VVLDI-DTPGGRVDSALEIVDLILNSPIPTIAYVNDRAASAGALIAL----------AAD 81 (178)
T ss_pred HHHHHHHHHHHHhCCCCe--EEEEE-ECcCCCHHHHHHHHHHHHhCCCCEEEEECCchHHHHHHHHH----------hCC
Confidence 345777777766654332 22222 678899999999999988775 4455654 3333332211 456
Q ss_pred ceeeecccccCC
Q 041829 294 SFNMNAHKWFLT 305 (486)
Q Consensus 294 s~~~~~hK~l~~ 305 (486)
.+.+.++=.++.
T Consensus 82 ~i~m~p~a~iG~ 93 (178)
T cd07021 82 EIYMAPGATIGA 93 (178)
T ss_pred eEEECCCCeEec
Confidence 666665554443
No 480
>cd02007 TPP_DXS Thiamine pyrophosphate (TPP) family, DXS subfamily, TPP-binding module; 1-Deoxy-D-xylulose-5-phosphate synthase (DXS) is a regulatory enzyme of the mevalonate-independent pathway involved in terpenoid biosynthesis. Terpeniods are plant natural products with important pharmaceutical activity. DXS catalyzes a transketolase-type condensation of pyruvate with D-glyceraldehyde-3-phosphate to form 1-deoxy-D-xylulose-5-phosphate (DXP) and carbon dioxide. The formation of DXP leads to the formation of the terpene precursor IPP (isopentyl diphosphate) and to the formation of thiamine (vitamin B1) and pyridoxal (vitamin B6).
Probab=31.89 E-value=3.5e+02 Score=24.02 Aligned_cols=43 Identities=12% Similarity=0.052 Sum_probs=25.5
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEe
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCAT 240 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~ 240 (486)
..+.++..|. .+.. ++| .-|++++.+++++..+ ...|.+|.+.
T Consensus 146 ~~~~~~a~G~---~~~~-~vd-----G~d~~~l~~a~~~a~~-~~~P~~I~~~ 188 (195)
T cd02007 146 PGNLFEELGF---RYIG-PVD-----GHNIEALIKVLKEVKD-LKGPVLLHVV 188 (195)
T ss_pred HHHHHHhcCC---Cccc-eEC-----CCCHHHHHHHHHHHHh-CCCCEEEEEE
Confidence 3444555566 4443 233 2388899998887654 3457766654
No 481
>PF14488 DUF4434: Domain of unknown function (DUF4434)
Probab=31.71 E-value=2e+02 Score=24.88 Aligned_cols=56 Identities=23% Similarity=0.154 Sum_probs=39.3
Q ss_pred ccCHHHHHHHHHHHHhCCCccEEEEEecC-Cc------------cccccCChHHHHHHHHHhCCEEEee
Q 041829 214 SLSPDSLAEAISRDLTIGLIPFFLCATVG-TT------------SSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 214 ~id~~~L~~~i~~~~~~g~~p~~vv~~~~-~t------------~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.++.+.-++.++.-.+.|...+++.-+.- .. ..+..|+|+.+.+.|.++|+.|++-
T Consensus 16 ~~~~~~W~~~~~~m~~~GidtlIlq~~~~~~~~~yps~~~~~~~~~~~~d~l~~~L~~A~~~Gmkv~~G 84 (166)
T PF14488_consen 16 NWTPAQWREEFRAMKAIGIDTLILQWTGYGGFAFYPSKLSPGGFYMPPVDLLEMILDAADKYGMKVFVG 84 (166)
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEEEeecCCcccCCccccCccccCCcccHHHHHHHHHHHcCCEEEEe
Confidence 67888888888877777766544443331 11 1234578999999999999999875
No 482
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=31.69 E-value=44 Score=31.21 Aligned_cols=29 Identities=14% Similarity=0.099 Sum_probs=23.0
Q ss_pred ccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 246 STAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 246 tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
.|.+.+.+++.++++++++-++||++|..
T Consensus 48 ~G~l~~~~~l~~~l~~~~i~~VIDATHPf 76 (248)
T PRK08057 48 VGGFGGAEGLAAYLREEGIDLVIDATHPY 76 (248)
T ss_pred ECCCCCHHHHHHHHHHCCCCEEEECCCcc
Confidence 45666778888888888999999998854
No 483
>PRK00910 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=31.63 E-value=1.3e+02 Score=27.39 Aligned_cols=47 Identities=11% Similarity=0.027 Sum_probs=35.5
Q ss_pred HHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 219 SLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 219 ~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
+-|..++=..-.|..|..|++..-+ ..|..-+.+++.++|++||+.+
T Consensus 154 HTEaavdLa~lAGl~p~~vicEil~-~dG~ma~~~~l~~fA~~h~l~~ 200 (218)
T PRK00910 154 HTEGTVDLMQMAGLQPAGVLCELTN-PDGTMAKTPEIIAFGKLHNMPV 200 (218)
T ss_pred ccHHHHHHHHHcCCCceEEEEEEec-CCCCcCCHHHHHHHHHHcCCcE
Confidence 3455555555567778777776644 5699999999999999999987
No 484
>PF06415 iPGM_N: BPG-independent PGAM N-terminus (iPGM_N); InterPro: IPR011258 This family represents the N-terminal region of the 2,3-bisphosphoglycerate-independent phosphoglycerate mutase (or phosphoglyceromutase or BPG-independent PGAM) protein (5.4.2.1 from EC). The family is found in conjunction with Metalloenzyme (located in the C-terminal region of the protein). ; GO: 0004619 phosphoglycerate mutase activity, 0030145 manganese ion binding, 0006007 glucose catabolic process, 0005737 cytoplasm; PDB: 1EQJ_A 1EJJ_A 1O99_A 1O98_A 3IGZ_B 3IGY_B 3NVL_A 2IFY_A.
Probab=31.32 E-value=83 Score=28.77 Aligned_cols=49 Identities=24% Similarity=0.226 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCC
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGM 264 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~ 264 (486)
.-+.|.++++..++++.+.=++-+.....+.+.++-|.+|.++|+++|+
T Consensus 12 ~n~~l~~~~~~~k~~~~~lHl~GLlSdGGVHSh~~Hl~al~~~a~~~gv 60 (223)
T PF06415_consen 12 KNPVLLEAIEHAKKNGGRLHLMGLLSDGGVHSHIDHLFALIKLAKKQGV 60 (223)
T ss_dssp TSHHHHHHHHHHCCTT--EEEEEEESS-SSS--HHHHHHHHHHHHHTT-
T ss_pred cCHHHHHHHHHHHhcCCeEEEEEEecCCCccccHHHHHHHHHHHHHcCC
Confidence 3467788887776655443344444444455556788999999999883
No 485
>cd06007 R3H_DEXH_helicase R3H domain of a group of proteins which also contain a DEXH-box helicase domain, and may function as ATP-dependent DNA or RNA helicases. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=31.17 E-value=98 Score=21.63 Aligned_cols=40 Identities=18% Similarity=0.072 Sum_probs=29.1
Q ss_pred HHHHHhcCcCccccccChhhHHHHHHHHHHHHHHcCCCCC
Q 041829 95 EMLSAGLNIVGFSWITSPAATELEMIVLDWLAKLLKLPED 134 (486)
Q Consensus 95 ~~l~~~~n~~~~~~~~~~~~~~le~~~~~~la~l~g~~~~ 134 (486)
+.+..+.........-.|..+..|+.++..+|+-+|+...
T Consensus 6 ~~i~~F~~~~~~~l~Fpp~ls~~eR~~vH~~a~~~gL~s~ 45 (59)
T cd06007 6 KALEDFRASDNEEYEFPSSLTNHERAVIHRLCRKLGLKSK 45 (59)
T ss_pred HHHHHHHcCcccEEEcCCCCCHHHHHHHHHHHHHcCCCce
Confidence 3444444444445556778999999999999999999764
No 486
>PRK09441 cytoplasmic alpha-amylase; Reviewed
Probab=30.86 E-value=37 Score=35.21 Aligned_cols=30 Identities=20% Similarity=0.178 Sum_probs=26.9
Q ss_pred CccccccCChHHHHHHHHHhCCEEEeeccc
Q 041829 243 TTSSTAVDPLLALGNIAKSNGMWFHVDAAY 272 (486)
Q Consensus 243 ~t~tG~id~l~~I~~ia~~~g~~lhvD~A~ 272 (486)
.+..|..++++++++-||++|+.+++|...
T Consensus 74 d~~fGt~~dl~~Li~~~H~~Gi~vi~D~V~ 103 (479)
T PRK09441 74 RTKYGTKEELLNAIDALHENGIKVYADVVL 103 (479)
T ss_pred CcCcCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 467888999999999999999999999864
No 487
>PRK00014 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=30.72 E-value=1.3e+02 Score=27.50 Aligned_cols=49 Identities=12% Similarity=0.089 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 220 LAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 220 L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
-|..++=..-.|..|..|++.. -+..|..-..+++.++|++||+.+ ++.
T Consensus 159 TEAavdLa~lAGl~P~~vicEi-l~~dG~ma~~~~l~~fA~~~~l~i-isi 207 (230)
T PRK00014 159 TEGSVDLAALAGLRPAGVLCEL-MNADGTMMRGASLERYAAKEGLVA-LAI 207 (230)
T ss_pred cHHHHHHHHHcCCCceEEEEEE-eCCCCCccCHHHHHHHHHHcCCcE-EEH
Confidence 3455544455677787777666 445688999999999999999987 443
No 488
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=30.67 E-value=4.1e+02 Score=24.05 Aligned_cols=40 Identities=13% Similarity=0.052 Sum_probs=25.9
Q ss_pred CeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcc
Q 041829 201 NFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTS 245 (486)
Q Consensus 201 ~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~ 245 (486)
++..++.| .-|.+.+++.+++..+....+-.++.+++...
T Consensus 53 ~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~~d~li~~ag~~~ 92 (248)
T TIGR01832 53 RFLSLTAD-----LSDIEAIKALVDSAVEEFGHIDILVNNAGIIR 92 (248)
T ss_pred ceEEEECC-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 67778877 44788888877765443334566777666543
No 489
>PRK10494 hypothetical protein; Provisional
Probab=30.23 E-value=1.4e+02 Score=28.12 Aligned_cols=71 Identities=13% Similarity=0.094 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHcCCCCCCcCCCCCCeEEcCch--hHHHHHHHHHHHHHHHHHhCccCCCCeEEEecCCCch-hHHHHHHH
Q 041829 118 EMIVLDWLAKLLKLPEDFLSSGQGGGVIQGTA--SEAVLVVLLAARDKALKRVGKNSLEKLVVYASDQTHS-ALQKACQI 194 (486)
Q Consensus 118 e~~~~~~la~l~g~~~~~~~~~~~~~~~t~gg--t~a~~~al~~a~~~~~~~~~~~~~~~~~v~~s~~~H~-s~~~a~~~ 194 (486)
|.++++.++.-+|.|.+ ..++-.-+ |.-|.. .+++. .. .+.++++++..|. .....++.
T Consensus 138 EA~~~~~~l~~lGVp~~-------~Ii~e~~s~nT~eNa~--~~~~~--~~-------~~~iiLVTsa~Hm~RA~~~f~~ 199 (259)
T PRK10494 138 TAEVGARVAQSLGVPRE-------DIITLDLPKDTEEEAA--AVKQA--IG-------DAPFLLVTSASHLPRAMIFFQQ 199 (259)
T ss_pred HHHHHHHHHHHcCCCHH-------HeeeCCCCCCHHHHHH--HHHHH--hC-------CCCEEEECCHHHHHHHHHHHHH
Confidence 55666667778899875 23332222 222322 22111 11 2346777777784 34456677
Q ss_pred hCCCCCCeEEEeCCC
Q 041829 195 GGIHPQNFRVLKTDS 209 (486)
Q Consensus 195 ~g~g~~~v~~v~~~~ 209 (486)
.|+ +++..|+|.
T Consensus 200 ~Gl---~v~p~Ptd~ 211 (259)
T PRK10494 200 EGL---NPLPAPANQ 211 (259)
T ss_pred cCC---ceeecCCcc
Confidence 889 999888863
No 490
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=29.98 E-value=4.3e+02 Score=24.15 Aligned_cols=50 Identities=12% Similarity=-0.095 Sum_probs=27.9
Q ss_pred hHHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCc
Q 041829 187 ALQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTT 244 (486)
Q Consensus 187 s~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t 244 (486)
...+.....+- ++..+..| --|.+.+++++++..+.-..+-+++-+++..
T Consensus 42 ~~~~~~~~~~~---~~~~~~~D-----~~~~~~~~~~~~~~~~~~~~id~li~~ag~~ 91 (257)
T PRK07067 42 RARLAALEIGP---AAIAVSLD-----VTRQDSIDRIVAAAVERFGGIDILFNNAALF 91 (257)
T ss_pred HHHHHHHHhCC---ceEEEEcc-----CCCHHHHHHHHHHHHHHcCCCCEEEECCCcC
Confidence 34444444444 56677766 3477778877776543322345566665543
No 491
>PRK01792 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=29.86 E-value=1.4e+02 Score=27.04 Aligned_cols=50 Identities=10% Similarity=0.009 Sum_probs=38.1
Q ss_pred CHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEE
Q 041829 216 SPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWF 266 (486)
Q Consensus 216 d~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~l 266 (486)
....-|+.++=..-.|..|..|++..- +..|..-+.+++.++|++||+.+
T Consensus 150 R~GHTEaavdLa~lAGl~p~~vicEil-~~dG~ma~~~~~~~fA~~~~l~~ 199 (214)
T PRK01792 150 RRGHTEAAVDLARLAGYKEAGVICEIT-NDDGTMARTPEIVEFAKKFGYAV 199 (214)
T ss_pred CCChHHHHHHHHHHcCCCceEEEEEEe-cCCCCccCHHHHHHHHHHcCCcE
Confidence 344456666655667888877777664 46699999999999999999988
No 492
>PRK04452 acetyl-CoA decarbonylase/synthase complex subunit delta; Provisional
Probab=29.60 E-value=2.7e+02 Score=27.14 Aligned_cols=46 Identities=13% Similarity=-0.007 Sum_probs=31.8
Q ss_pred ccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEee
Q 041829 214 SLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVD 269 (486)
Q Consensus 214 ~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD 269 (486)
.-|++.|++.++... |.+|.+-.++ .++.+++.++|++||..+++=
T Consensus 136 ~kD~evleaale~~~--g~~pLInSat--------~en~~~i~~lA~~y~~~Vva~ 181 (319)
T PRK04452 136 EKDAEVLEKVAEAAE--GERCLLGSAE--------EDNYKKIAAAAMAYGHAVIAW 181 (319)
T ss_pred CCCHHHHHHHHHHhC--CCCCEEEECC--------HHHHHHHHHHHHHhCCeEEEE
Confidence 559999999987653 3445332222 235999999999999877643
No 493
>PF04577 DUF563: Protein of unknown function (DUF563); InterPro: IPR007657 This is a family of uncharacterised glycosyltransferases belonging to glycosyltransferase family 61. Sequences are further processed into a mature form.; GO: 0016757 transferase activity, transferring glycosyl groups
Probab=29.30 E-value=2.9e+02 Score=24.28 Aligned_cols=88 Identities=14% Similarity=0.092 Sum_probs=51.6
Q ss_pred HHHHHHHHHHhCCC--ccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeeccccchhccCccchhcccCCcCCCcee
Q 041829 219 SLAEAISRDLTIGL--IPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDAAYAGSACICPEYRQYIDGVEEADSFN 296 (486)
Q Consensus 219 ~L~~~i~~~~~~g~--~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~A~g~~~~~~~~~~~~~~~~~~aDs~~ 296 (486)
.+.+.+.+...... +|.+++++=..+....+.+.++|.+.++++|+.++-.+... +...++-+..+|.+.
T Consensus 86 ~~~~~~~~~~~~~~~~~p~i~~i~R~~~~~R~i~Ne~el~~~l~~~~~~~v~~~~~s--------~~eqv~~~~~a~vii 157 (206)
T PF04577_consen 86 ALRDRIRRKLNLPPPKRPRILYISRRKSGSRRILNEDELLEILKKYGFEVVDPEDLS--------FEEQVKLFASAKVII 157 (206)
T ss_pred HHHHHHHHHhCCcccCCCeEEEEecCCCCCCcCcCHHHHHHHHhhCCeEEEeCCCCC--------HHHHHHHhcCCCEEE
Confidence 66677766554333 57777777756667888999999999999995543322111 222222234566543
Q ss_pred ee----cccccCCCCcceEEEE
Q 041829 297 MN----AHKWFLTNFDCSALWV 314 (486)
Q Consensus 297 ~~----~hK~l~~p~~~g~l~~ 314 (486)
.. .+-.+++|.+++++-+
T Consensus 158 g~hGs~l~n~~F~~~~s~viei 179 (206)
T PF04577_consen 158 GPHGSALTNLLFMPPGSTVIEI 179 (206)
T ss_pred ecCchHhheeeecCCCCEEEEE
Confidence 32 1333455555666555
No 494
>PRK03353 ribB 3,4-dihydroxy-2-butanone 4-phosphate synthase; Provisional
Probab=29.19 E-value=1.5e+02 Score=27.07 Aligned_cols=49 Identities=14% Similarity=0.040 Sum_probs=37.6
Q ss_pred HHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHhCCEEEeec
Q 041829 220 LAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSNGMWFHVDA 270 (486)
Q Consensus 220 L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~g~~lhvD~ 270 (486)
=|.+++=.+-.|..|..|++... +..|..-+.+++.++|++||+.+ ++.
T Consensus 154 tEaavdLa~lAgl~P~avi~ei~-~~~G~~~~~~~~~~fA~~~~l~~-v~i 202 (217)
T PRK03353 154 TEATIDLMTLAGLKPAGVLCELT-NDDGTMARAPECIAFAKQHNMPV-LTI 202 (217)
T ss_pred hHHHHHHHHHcCCCceEEEEEee-cCCCCcccHHHHHHHHHHcCCcE-EEH
Confidence 45666555667888887777663 35688999999999999999998 554
No 495
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=29.11 E-value=2.2e+02 Score=22.56 Aligned_cols=71 Identities=18% Similarity=0.244 Sum_probs=46.5
Q ss_pred HHHHHHHhCCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh--CCE
Q 041829 188 LQKACQIGGIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN--GMW 265 (486)
Q Consensus 188 ~~~a~~~~g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~--g~~ 265 (486)
+...++..|. ++..++.+ .+.+++.+.+.+.. |-+|.++.. .+.......++++..|+. ++.
T Consensus 20 la~~l~~~G~---~v~~~d~~------~~~~~l~~~~~~~~-----pd~V~iS~~--~~~~~~~~~~l~~~~k~~~p~~~ 83 (121)
T PF02310_consen 20 LAAYLRKAGH---EVDILDAN------VPPEELVEALRAER-----PDVVGISVS--MTPNLPEAKRLARAIKERNPNIP 83 (121)
T ss_dssp HHHHHHHTTB---EEEEEESS------B-HHHHHHHHHHTT-----CSEEEEEES--SSTHHHHHHHHHHHHHTTCTTSE
T ss_pred HHHHHHHCCC---eEEEECCC------CCHHHHHHHHhcCC-----CcEEEEEcc--CcCcHHHHHHHHHHHHhcCCCCE
Confidence 4445556677 88877653 45688888776642 456666542 344556778888888777 788
Q ss_pred EEeeccccc
Q 041829 266 FHVDAAYAG 274 (486)
Q Consensus 266 lhvD~A~g~ 274 (486)
+++=|.+..
T Consensus 84 iv~GG~~~t 92 (121)
T PF02310_consen 84 IVVGGPHAT 92 (121)
T ss_dssp EEEEESSSG
T ss_pred EEEECCchh
Confidence 888876643
No 496
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=28.73 E-value=53 Score=30.69 Aligned_cols=29 Identities=17% Similarity=0.101 Sum_probs=21.7
Q ss_pred ccccCChHHHHHHHHHhCCEEEeeccccc
Q 041829 246 STAVDPLLALGNIAKSNGMWFHVDAAYAG 274 (486)
Q Consensus 246 tG~id~l~~I~~ia~~~g~~lhvD~A~g~ 274 (486)
.|..-+.+++.++|+++++-++||++|.-
T Consensus 49 ~G~lg~~~~l~~~l~~~~i~~vIDATHPf 77 (249)
T PF02571_consen 49 VGRLGDEEGLAEFLRENGIDAVIDATHPF 77 (249)
T ss_pred ECCCCCHHHHHHHHHhCCCcEEEECCCch
Confidence 35555677788888888888888888754
No 497
>cd00953 KDG_aldolase KDG (2-keto-3-deoxygluconate) aldolases found in archaea. This subfamily of enzymes is adapted for high thermostability and shows specificity for non-phosphorylated substrates. The enzyme catalyses the reversible aldol cleavage of 2-keto-3-dexoygluconate to pyruvate and glyceraldehyde, the third step of a modified non-phosphorylated Entner-Doudoroff pathway of glucose oxidation. KDG aldolase shows no significant sequence similarity to microbial 2-keto-3-deoxyphosphogluconate (KDPG) aldolases, and the enzyme shows no activity with glyceraldehyde 3-phosphate as substrate. The enzyme is a tetramer and a member of the DHDPS family of Schiff-base-dependent class I aldolases.
Probab=28.54 E-value=1e+02 Score=29.31 Aligned_cols=55 Identities=13% Similarity=0.119 Sum_probs=38.2
Q ss_pred EeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCccccccCChHHHHHHHHHh
Q 041829 205 LKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAVDPLLALGNIAKSN 262 (486)
Q Consensus 205 v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~id~l~~I~~ia~~~ 262 (486)
-|.+. +.+|.+.+++.++...+.|-.-+++..+.|....=..+.-.++.+.+.+.
T Consensus 10 TPf~~---g~iD~~~~~~li~~l~~~Gv~Gl~~~GstGE~~~Lt~eEr~~l~~~~~~~ 64 (279)
T cd00953 10 TPFTG---NKIDKEKFKKHCENLISKGIDYVFVAGTTGLGPSLSFQEKLELLKAYSDI 64 (279)
T ss_pred cCcCC---CCcCHHHHHHHHHHHHHcCCcEEEEcccCCCcccCCHHHHHHHHHHHHHH
Confidence 45553 58999999999998888886656666666655555556666777666553
No 498
>smart00839 ELFV_dehydrog Glutamate/Leucine/Phenylalanine/Valine dehydrogenase. Glutamate, leucine, phenylalanine and valine dehydrogenases are structurally and functionally related. They contain a Gly-rich region containing a conserved Lys residue, which has been implicated in the catalytic activity, in each case a reversible oxidative deamination reaction.
Probab=28.47 E-value=2.1e+02 Score=22.47 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=34.3
Q ss_pred HHHHHHccCcEEEEeeeECCEeEEEEEecCCCC----CHHHHH-HHHHHHHHHHHHHHHhhh
Q 041829 428 LLDDINSTGKIFISHTVLSGKYILRFAVGAPLT----EWRHVN-AAWEVMQDKASALLARLS 484 (486)
Q Consensus 428 l~~~l~~~g~~~~~~~~~~~~~~lRi~~~~~~~----t~~di~-~~~~~l~~~~~~l~~~~~ 484 (486)
..+.|.++|..+++....+..+.+...+ -+.- +++++. ++.+.|.+...++.+...
T Consensus 40 a~~~L~~rGi~~~PD~~~NaGGvi~s~~-E~~~~~~~~~e~v~~~~~~~i~~~~~~v~~~a~ 100 (102)
T smart00839 40 ADDILEDRGVLYAPDFAANAGGVIVSAL-EMLQNLARTAEEVFTDLSEIMRNALEEIFETAQ 100 (102)
T ss_pred HHHHHHHCCCEEcCcceecCCCEEeehh-hhhcccCCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4455667887776655555444444333 2211 566665 888888888888776554
No 499
>KOG0630 consensus Predicted pyridoxal-dependent decarboxylase [Amino acid transport and metabolism]
Probab=28.46 E-value=3.3e+02 Score=28.04 Aligned_cols=58 Identities=19% Similarity=0.323 Sum_probs=38.6
Q ss_pred cchHHHHHHHHHHHccCcEEEEe-eeECCEeEEEEEecCCCCCHHHHHHHHHHHHHHHHHHH
Q 041829 420 HGNKLNHKLLDDINSTGKIFISH-TVLSGKYILRFAVGAPLTEWRHVNAAWEVMQDKASALL 480 (486)
Q Consensus 420 ~~~~~~~~l~~~l~~~g~~~~~~-~~~~~~~~lRi~~~~~~~t~~di~~~~~~l~~~~~~l~ 480 (486)
+.+.+|-+|.+.|......|-.+ .+..|..|+|+.+ .+++.|++.+++.+.+..+++.
T Consensus 638 einhLNidLVeaLKStDaAFS~Gd~Tr~Gl~CVkFGM---lsd~kdleeLldlVaqkGKeie 696 (838)
T KOG0630|consen 638 EINHLNIDLVEALKSTDAAFSLGDCTRDGLICVKFGM---LSDEKDLEELLDLVAQKGKEIE 696 (838)
T ss_pred HHhhccHHHHHHHhhhhhhcccCCccccceeEEEecc---ccchhhHHHHHHHHHHhchhhh
Confidence 34566667777776655444332 3456778999977 4578888888888876665544
No 500
>TIGR03581 EF_0839 conserved hypothetical protein EF_0839/AHA_3917. Members of this family of relatively uncommon proteins are found in both Gram-positive (e.g. Enterococcus faecalis) and Gram-negative (e.g. Aeromonas hydrophila) bacteria, as part of a cluster of conserved proteins. The function is unknown.
Probab=28.45 E-value=2.1e+02 Score=25.98 Aligned_cols=70 Identities=10% Similarity=0.102 Sum_probs=50.5
Q ss_pred hHHHHHHHh-CCCCCCeEEEeCCCCCCCccCHHHHHHHHHHHHhCCCccEEEEEecCCcccccc--CChHHHHHHHHHhC
Q 041829 187 ALQKACQIG-GIHPQNFRVLKTDSSTNYSLSPDSLAEAISRDLTIGLIPFFLCATVGTTSSTAV--DPLLALGNIAKSNG 263 (486)
Q Consensus 187 s~~~a~~~~-g~g~~~v~~v~~~~~~~~~id~~~L~~~i~~~~~~g~~p~~vv~~~~~t~tG~i--d~l~~I~~ia~~~g 263 (486)
++..+..++ .+|...+.+.|.. +.-..|++++.-+.+.++|. . + -|||-| |++++|.++|.+.|
T Consensus 136 ~vetAiaml~dmG~~SiKffPM~----Gl~~leE~~avA~aca~~g~---~--l----EPTGGIdl~Nf~~I~~i~ldaG 202 (236)
T TIGR03581 136 PIETAIAMLKDMGGSSVKFFPMG----GLKHLEEYAAVAKACAKHGF---Y--L----EPTGGIDLDNFEEIVQIALDAG 202 (236)
T ss_pred eHHHHHHHHHHcCCCeeeEeecC----CcccHHHHHHHHHHHHHcCC---c--c----CCCCCccHHhHHHHHHHHHHcC
Confidence 455555543 5666688888986 35678888888777777763 1 1 478888 57999999999998
Q ss_pred CEEEee
Q 041829 264 MWFHVD 269 (486)
Q Consensus 264 ~~lhvD 269 (486)
+..++=
T Consensus 203 v~kviP 208 (236)
T TIGR03581 203 VEKVIP 208 (236)
T ss_pred CCeecc
Confidence 876543
Done!