BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041830
(600 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/267 (31%), Positives = 133/267 (49%), Gaps = 51/267 (19%)
Query: 363 EQHKRLLESYSIEDLRRATEKFNSSNRIE----GAVYHGRL-NGKNLAIKRTEHEVITKL 417
E H L+ +S+ +L+ A++ F + N + G VY GRL +G +A+KR + E
Sbjct: 11 EVHLGQLKRFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGG 70
Query: 418 EMQ------LVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
E+Q ++ A H N++RL G C+T LV+ Y NGS
Sbjct: 71 ELQFQTEVEMISMAVHR--NLLRLRGFCMTP-TERLLVYPYMANGS-------------- 113
Query: 472 FIASCYCF-------LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
+ASC L W +R RI L A L Y+H +P +HR++K+ NI LDEEF
Sbjct: 114 -VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 172
Query: 525 ARVGNFGMARCVNDDTE-------------SPQFYSTNPASWSMGIDIFAYGIVLLEVLS 571
A VG+FG+A+ ++ +P++ ST +S D+F YG++LLE+++
Sbjct: 173 AVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK--TDVFGYGVMLLELIT 230
Query: 572 GQTPINRPRKKDEGSVWLSEKIKSILQ 598
GQ + R ++ V L + +K +L+
Sbjct: 231 GQRAFDLARLANDDDVMLLDWVKGLLK 257
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 136/267 (50%), Gaps = 51/267 (19%)
Query: 363 EQHKRLLESYSIEDLRRATEKFNSSNRIE----GAVYHGRL-NGKNLAIKRTEHE----- 412
E H L+ +S+ +L+ A++ F++ N + G VY GRL +G +A+KR + E
Sbjct: 19 EVHLGQLKRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGG 78
Query: 413 -VITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
+ + E++++ A H N++RL G C+T LV+ Y NGS
Sbjct: 79 ELQFQTEVEMISMAVHR--NLLRLRGFCMTP-TERLLVYPYMANGS-------------- 121
Query: 472 FIASCYCF-------LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
+ASC L W +R RI L A L Y+H +P +HR++K+ NI LDEEF
Sbjct: 122 -VASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFE 180
Query: 525 ARVGNFGMARCVNDDTE-------------SPQFYSTNPASWSMGIDIFAYGIVLLEVLS 571
A VG+FG+A+ ++ +P++ ST +S D+F YG++LLE+++
Sbjct: 181 AVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPEYLSTGKSSEK--TDVFGYGVMLLELIT 238
Query: 572 GQTPINRPRKKDEGSVWLSEKIKSILQ 598
GQ + R ++ V L + +K +L+
Sbjct: 239 GQRAFDLARLANDDDVMLLDWVKGLLK 265
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 59/250 (23%)
Query: 369 LESYSIEDLRRATEKFN------SSNRIE----GAVYHGRLNGKNLAIKR-------TEH 411
S+S +L+ T F+ N++ G VY G +N +A+K+ T
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 412 EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
E+ + + ++ A H N+V LLG +DG LV+ Y NGSL D L
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRL--------- 121
Query: 472 FIASCYCF---LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
SC L+W R +I A + ++H ++HR+IKS NI LDE F A++
Sbjct: 122 ---SCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKIS 175
Query: 529 NFGMARCVNDDTESPQFYSTNPASWSMGI-----------------DIFAYGIVLLEVLS 571
+FG+AR S +F T S +G DI+++G+VLLE+++
Sbjct: 176 DFGLARA------SEKFAQTVMXSRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
Query: 572 GQTPINRPRK 581
G ++ R+
Sbjct: 230 GLPAVDEHRE 239
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 112/250 (44%), Gaps = 59/250 (23%)
Query: 369 LESYSIEDLRRATEKFN------SSNRIE----GAVYHGRLNGKNLAIKR-------TEH 411
S+S +L+ T F+ N++ G VY G +N +A+K+ T
Sbjct: 12 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 71
Query: 412 EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
E+ + + ++ A H N+V LLG +DG LV+ Y NGSL D L
Sbjct: 72 ELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRL--------- 121
Query: 472 FIASCYCF---LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
SC L+W R +I A + ++H ++HR+IKS NI LDE F A++
Sbjct: 122 ---SCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKIS 175
Query: 529 NFGMARCVNDDTESPQFYSTNPASWSMGI-----------------DIFAYGIVLLEVLS 571
+FG+AR S +F T +G DI+++G+VLLE+++
Sbjct: 176 DFGLARA------SEKFAQTVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIIT 229
Query: 572 GQTPINRPRK 581
G ++ R+
Sbjct: 230 GLPAVDEHRE 239
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 111/250 (44%), Gaps = 59/250 (23%)
Query: 369 LESYSIEDLRRATEKFN------SSNRIE----GAVYHGRLNGKNLAIKR-------TEH 411
S+S +L+ T F+ N+ G VY G +N +A+K+ T
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 62
Query: 412 EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
E+ + + ++ A H N+V LLG +DG LV+ Y NGSL D L
Sbjct: 63 ELKQQFDQEIKVXAKCQHENLVELLGFS-SDGDDLCLVYVYXPNGSLLDRL--------- 112
Query: 472 FIASCYCF---LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
SC L+W R +I A + ++H ++HR+IKS NI LDE F A++
Sbjct: 113 ---SCLDGTPPLSWHXRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKIS 166
Query: 529 NFGMARCVNDDTESPQFYSTNPASWSMGI-----------------DIFAYGIVLLEVLS 571
+FG+AR S +F S +G DI+++G+VLLE+++
Sbjct: 167 DFGLARA------SEKFAQXVXXSRIVGTTAYXAPEALRGEITPKSDIYSFGVVLLEIIT 220
Query: 572 GQTPINRPRK 581
G ++ R+
Sbjct: 221 GLPAVDEHRE 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 109/244 (44%), Gaps = 47/244 (19%)
Query: 369 LESYSIEDLRRATEKFN------SSNRIE----GAVYHGRLNGKNLAIKR-------TEH 411
S+S +L+ T F+ N++ G VY G +N +A+K+ T
Sbjct: 6 FHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTE 65
Query: 412 EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ 471
E+ + + ++ A H N+V LLG +DG LV+ Y NGSL D L
Sbjct: 66 ELKQQFDQEIKVMAKCQHENLVELLGFS-SDGDDLCLVYVYMPNGSLLDRL--------- 115
Query: 472 FIASCYCF---LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
SC L+W R +I A + ++H ++HR+IKS NI LDE F A++
Sbjct: 116 ---SCLDGTPPLSWHMRCKIAQGAANGINFLHE---NHHIHRDIKSANILLDEAFTAKIS 169
Query: 529 NFGMARCVNDDTESPQFYSTNPASWSMG-----------IDIFAYGIVLLEVLSGQTPIN 577
+FG+AR + + M DI+++G+VLLE+++G ++
Sbjct: 170 DFGLARASEKFAQXVMXXRIVGTTAYMAPEALRGEITPKSDIYSFGVVLLEIITGLPAVD 229
Query: 578 RPRK 581
R+
Sbjct: 230 EHRE 233
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 42/250 (16%)
Query: 369 LESYSIE--DLRRATEKFNS----SNRIEGAVYHGRL-NGKNLAIKRTEHEV---ITKLE 418
ESY + DL AT F+ + + G VY G L +G +A+KR E I + E
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 419 MQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYC 478
++ + HP++V L+G C + L+++Y +NG+LK L+G
Sbjct: 84 TEIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMS------- 135
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
++W QRL IC+ A L Y+H + +HR++KS NI LDE F ++ +FG+++
Sbjct: 136 -MSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK---K 188
Query: 539 DTESPQFYSTNPASWSMGI---------------DIFAYGIVLLEVLSGQTPI--NRPRK 581
TE Q + ++G D++++G+VL EVL ++ I + PR+
Sbjct: 189 GTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 582 KDEGSVWLSE 591
+ W E
Sbjct: 249 MVNLAEWAVE 258
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 120/250 (48%), Gaps = 42/250 (16%)
Query: 369 LESYSIE--DLRRATEKFNS----SNRIEGAVYHGRL-NGKNLAIKRTEHEV---ITKLE 418
ESY + DL AT F+ + + G VY G L +G +A+KR E I + E
Sbjct: 24 FESYRVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFE 83
Query: 419 MQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYC 478
++ + HP++V L+G C + L+++Y +NG+LK L+G
Sbjct: 84 TEIETLSFCRHPHLVSLIGFC-DERNEMILIYKYMENGNLKRHLYGSDLPTMS------- 135
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
++W QRL IC+ A L Y+H + +HR++KS NI LDE F ++ +FG+++
Sbjct: 136 -MSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDENFVPKITDFGISK---K 188
Query: 539 DTESPQFYSTNPASWSMGI---------------DIFAYGIVLLEVLSGQTPI--NRPRK 581
TE Q + ++G D++++G+VL EVL ++ I + PR+
Sbjct: 189 GTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPRE 248
Query: 582 KDEGSVWLSE 591
+ W E
Sbjct: 249 MVNLAEWAVE 258
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 102/204 (50%), Gaps = 34/204 (16%)
Query: 392 GAVYHGRLNGK-NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPHS 446
G V +G+ G+ ++AIK + ++ E + ++ A H +V+L G C P
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-I 94
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 95 FIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---SKQ 140
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
++HR++ +RN ++++ +V +FG++R V DD E+ S P W S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 556 GIDIFAYGIVLLEVLS-GQTPINR 578
DI+A+G+++ E+ S G+ P R
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 29/199 (14%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITK-LEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVF 450
G V + K++AIK+ E E K ++L Q + +HPNIV+L G CL LV
Sbjct: 23 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVM 79
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
EYA+ GSL + LHG + + T + + CL + + Y+H + + +HR
Sbjct: 80 EYAEGGSLYNVLHGAEPLP---------YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 130
Query: 511 NIKSRNIFLDEEFNA-RVGNFGMARCVNDDTESPQFYSTNPASW-----------SMGID 558
++K N+ L ++ +FG A C D ++ + A+W S D
Sbjct: 131 DLKPPNLLLVAGGTVLKICDFGTA-C---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 186
Query: 559 IFAYGIVLLEVLSGQTPIN 577
+F++GI+L EV++ + P +
Sbjct: 187 VFSWGIILWEVITRRKPFD 205
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 37/196 (18%)
Query: 398 RLNGKNLAIKRTEHEVITKLEMQLVQHATHH--------HPNIVRLLGTCLTDGPHSFLV 449
R NG+ A+K + E++ +L+ V+H HP I+R+ GT D F++
Sbjct: 28 RHNGRYYAMKVLKKEIVVRLKQ--VEHTNDERLMLSIVTHPFIIRMWGT-FQDAQQIFMI 84
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
+Y + G L L N +A Y +V +AL+Y+H + ++
Sbjct: 85 MDYIEGGELFSLLRKSQRFPNP-VAKFYA-----------AEVCLALEYLH---SKDIIY 129
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVND---------DTESPQFYSTNPASWSMGIDIF 560
R++K NI LD+ + ++ +FG A+ V D D +P+ ST P ++ ID +
Sbjct: 130 RDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKP--YNKSIDWW 187
Query: 561 AYGIVLLEVLSGQTPI 576
++GI++ E+L+G TP
Sbjct: 188 SFGILIYEMLAGYTPF 203
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 96/199 (48%), Gaps = 29/199 (14%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITK-LEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVF 450
G V + K++AIK+ E E K ++L Q + +HPNIV+L G CL LV
Sbjct: 22 GVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACLNP---VCLVM 78
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
EYA+ GSL + LHG + + T + + CL + + Y+H + + +HR
Sbjct: 79 EYAEGGSLYNVLHGAEPLP---------YYTAAHAMSWCLQCSQGVAYLHSMQPKALIHR 129
Query: 511 NIKSRNIFLDEEFNA-RVGNFGMARCVNDDTESPQFYSTNPASW-----------SMGID 558
++K N+ L ++ +FG A C D ++ + A+W S D
Sbjct: 130 DLKPPNLLLVAGGTVLKICDFGTA-C---DIQTHMTNNKGSAAWMAPEVFEGSNYSEKCD 185
Query: 559 IFAYGIVLLEVLSGQTPIN 577
+F++GI+L EV++ + P +
Sbjct: 186 VFSWGIILWEVITRRKPFD 204
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ----FIASCYCFLTWS 483
HHPNI+ LLG C G + +L EYA +G+L D+L ++ S L+
Sbjct: 81 HHPNIINLLGACEHRG-YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 139
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q L DVA + Y+ ++HRN+ +RNI + E + A++ +FG++R +
Sbjct: 140 QLLHFAADVARGMDYLSQ---KQFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVK 194
Query: 544 QFYSTNPASWSMGI------------DIFAYGIVLLEVLS-GQTP 575
+ P W M I D+++YG++L E++S G TP
Sbjct: 195 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 34/204 (16%)
Query: 392 GAVYHGRLNGK-NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPHS 446
G V +G+ G+ ++AIK + ++ E + ++ A H +V+L G C P
Sbjct: 38 GVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-I 94
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 95 FIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---SKQ 140
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
++HR++ +RN ++++ +V +FG++R V DD + S P W S
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 200
Query: 556 GIDIFAYGIVLLEVLS-GQTPINR 578
DI+A+G+++ E+ S G+ P R
Sbjct: 201 KSDIWAFGVLMWEIYSLGKMPYER 224
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 392 GAVYHGRLNGK-NLAIKR------TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V +G+ G+ ++AIK +E E I + ++ + H +V+L G C P
Sbjct: 22 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM----NLSHEKLVQLYGVCTKQRP 77
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 78 -IFIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---S 122
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
++HR++ +RN ++++ +V +FG++R V DD + S P W
Sbjct: 123 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 182
Query: 554 SMGIDIFAYGIVLLEVLS-GQTPINR 578
S DI+A+G+++ E+ S G+ P R
Sbjct: 183 SSKSDIWAFGVLMWEIYSLGKMPYER 208
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 392 GAVYHGRLNGK-NLAIKR------TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V +G+ G+ ++AIK +E E I + ++ + H +V+L G C P
Sbjct: 18 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM----NLSHEKLVQLYGVCTKQRP 73
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 74 -IFIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---S 118
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
++HR++ +RN ++++ +V +FG++R V DD + S P W
Sbjct: 119 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 178
Query: 554 SMGIDIFAYGIVLLEVLS-GQTPINR 578
S DI+A+G+++ E+ S G+ P R
Sbjct: 179 SSKSDIWAFGVLMWEIYSLGKMPYER 204
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 34/204 (16%)
Query: 392 GAVYHGRLNGK-NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPHS 446
G V +G+ G+ ++AIK + ++ E + ++ A H +V+L G C P
Sbjct: 29 GVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-I 85
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 86 FIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---SKQ 131
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
++HR++ +RN ++++ +V +FG++R V DD + S P W S
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSS 191
Query: 556 GIDIFAYGIVLLEVLS-GQTPINR 578
DI+A+G+++ E+ S G+ P R
Sbjct: 192 KSDIWAFGVLMWEIYSLGKMPYER 215
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 101/206 (49%), Gaps = 38/206 (18%)
Query: 392 GAVYHGRLNGK-NLAIKR------TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V +G+ G+ ++AIK +E E I + ++ + H +V+L G C P
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMM----NLSHEKLVQLYGVCTKQRP 78
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 79 -IFIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---S 123
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
++HR++ +RN ++++ +V +FG++R V DD + S P W
Sbjct: 124 KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKF 183
Query: 554 SMGIDIFAYGIVLLEVLS-GQTPINR 578
S DI+A+G+++ E+ S G+ P R
Sbjct: 184 SSKSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 94/199 (47%), Gaps = 26/199 (13%)
Query: 392 GAVYHGRLNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ +G ++A+K E + + ++ HPNIV +G +T P+
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-AVTQPPNL 109
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V EY GSL LH A + L +RL + DVA + Y+H+ NP
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQ---------LDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASWSMGI--------- 557
VHRN+KS N+ +D+++ +V +FG++R S + + P + +
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDEPSNEK 219
Query: 558 -DIFAYGIVLLEVLSGQTP 575
D++++G++L E+ + Q P
Sbjct: 220 SDVYSFGVILWELATLQQP 238
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 101/204 (49%), Gaps = 34/204 (16%)
Query: 392 GAVYHGRLNGK-NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPHS 446
G V +G+ G+ ++AIK + ++ E + ++ A H +V+L G C P
Sbjct: 23 GVVKYGKWRGQYDVAIKMIKEGSMS--EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRP-I 79
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
F++ EY NG L ++L M+++F Q L +C DV A++Y+ +
Sbjct: 80 FIITEYMANGCLLNYLR---EMRHRFQTQ--------QLLEMCKDVCEAMEYLE---SKQ 125
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
++HR++ +RN ++++ +V +FG++R V DD + S P W S
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSS 185
Query: 556 GIDIFAYGIVLLEVLS-GQTPINR 578
DI+A+G+++ E+ S G+ P R
Sbjct: 186 KSDIWAFGVLMWEIYSLGKMPYER 209
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ----FIASCYCFLTWS 483
HHPNI+ LLG C G + +L EYA +G+L D+L ++ S L+
Sbjct: 84 HHPNIINLLGACEHRG-YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 142
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q L DVA + Y+ ++HR++ +RNI + E + A++ +FG++R +
Sbjct: 143 QLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVK 197
Query: 544 QFYSTNPASWSMGI------------DIFAYGIVLLEVLS-GQTP 575
+ P W M I D+++YG++L E++S G TP
Sbjct: 198 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 24/165 (14%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQ----FIASCYCFLTWS 483
HHPNI+ LLG C G + +L EYA +G+L D+L ++ S L+
Sbjct: 74 HHPNIINLLGACEHRG-YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQ 132
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q L DVA + Y+ ++HR++ +RNI + E + A++ +FG++R +
Sbjct: 133 QLLHFAADVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVK 187
Query: 544 QFYSTNPASWSMGI------------DIFAYGIVLLEVLS-GQTP 575
+ P W M I D+++YG++L E++S G TP
Sbjct: 188 KTMGRLPVRW-MAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 93/203 (45%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 76
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LVFE+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 77 IC-LVFEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 121
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
S +HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 122 ASVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 95/201 (47%), Gaps = 30/201 (14%)
Query: 392 GAVYHGRLNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ +G ++A+K E + + ++ HPNIV +G +T P+
Sbjct: 51 GTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG-AVTQPPNL 109
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V EY GSL LH A + L +RL + DVA + Y+H+ NP
Sbjct: 110 SIVTEYLSRGSLYRLLHKSGAREQ---------LDERRRLSMAYDVAKGMNYLHN-RNPP 159
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWS 554
VHR++KS N+ +D+++ +V +FG++R + +P+ P+ +
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS--N 217
Query: 555 MGIDIFAYGIVLLEVLSGQTP 575
D++++G++L E+ + Q P
Sbjct: 218 EKSDVYSFGVILWELATLQQP 238
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 46/271 (16%)
Query: 342 DKKVSFEGSQSTIEGQIIDTAEQHKRLLESYSIEDLRRATEKFNSS----NRIE------ 391
D++V FE +E D RL++ +E A ++F S N E
Sbjct: 141 DEEVYFENLMQLVEHYTTDADGLCTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQT 200
Query: 392 ------GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-HHPNIVRLLGTCLTDGP 444
G V G G +A+K +++ + + T H N+V+LLG + +
Sbjct: 201 IGKGEFGDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKG 260
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
++V EY GSL D+L + + + C L +S LDV A++Y+
Sbjct: 261 GLYIVTEYMAKGSLVDYLRS----RGRSVLGGDCLLKFS------LDVCEAMEYLE---G 307
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
++VHR++ +RN+ + E+ A+V +FG+ + + S Q P W
Sbjct: 308 NNFVHRDLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKF 363
Query: 554 SMGIDIFAYGIVLLEVLS-GQTPINRPRKKD 583
S D++++GI+L E+ S G+ P R KD
Sbjct: 364 STKSDVWSFGILLWEIYSFGRVPYPRIPLKD 394
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 19 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 74
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LVFE+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 75 IC-LVFEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 119
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
+HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 120 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 179
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 180 SSKSDVWSFGVLMWEVFSEGKIP 202
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 72.0 bits (175), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG+AR + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 21 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 76
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LVFE+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 77 IC-LVFEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 121
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
+HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 122 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 181
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 182 SSKSDVWSFGVLMWEVFSEGKIP 204
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 24 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 79
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LVFE+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 80 IC-LVFEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 124
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
+HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 125 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 184
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 185 SSKSDVWSFGVLMWEVFSEGKIP 207
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 99/201 (49%), Gaps = 22/201 (10%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-HHPNIVRLLGTCLTDGPHSFLVF 450
G V G G +A+K +++ + + T H N+V+LLG + + ++V
Sbjct: 26 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 85
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
EY GSL D+L + + + C L +S LDV A++Y+ ++VHR
Sbjct: 86 EYMAKGSLVDYLRS----RGRSVLGGDCLLKFS------LDVCEAMEYLE---GNNFVHR 132
Query: 511 NIKSRNIFLDEEFNARVGNFGM---ARCVNDDTESPQFYST----NPASWSMGIDIFAYG 563
++ +RN+ + E+ A+V +FG+ A D + P ++ A++S D++++G
Sbjct: 133 DLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWSFG 192
Query: 564 IVLLEVLS-GQTPINRPRKKD 583
I+L E+ S G+ P R KD
Sbjct: 193 ILLWEIYSFGRVPYPRIPLKD 213
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 99
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 100 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 138
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
RN+ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 139 RNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLTESKFSVA 198
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 199 SDVWSFGVVLYELFT 213
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 41 GLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 96
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LVFE+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 97 IC-LVFEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 141
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
+HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 142 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 201
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 202 SSKSDVWSFGVLMWEVFSEGKIP 224
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 93 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 140
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 141 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 195
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 196 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 76 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 123
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 124 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 178
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HG-GLAMKNQFIASCYCFLTWSQR 485
HP +V+ G C + P ++V EY NG L ++L HG GL SQ
Sbjct: 62 HPKLVKFYGVCSKEYP-IYIVTEYISNGCLLNYLRSHGKGLEP--------------SQL 106
Query: 486 LRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF 545
L +C DV + ++ + ++HR++ +RN +D + +V +FGM R V DD
Sbjct: 107 LEMCYDVCEGMAFLE---SHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSV 163
Query: 546 YSTNPASWSM-----------GIDIFAYGIVLLEVLS-GQTPIN 577
+ P WS D++A+GI++ EV S G+ P +
Sbjct: 164 GTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYD 207
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 103 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 150
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 151 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 205
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 206 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-HHPNIVRLLGTCLTDGPHSFLVF 450
G V G G +A+K +++ + + T H N+V+LLG + + ++V
Sbjct: 35 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 94
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
EY GSL D+L + + + C L +S LDV A++Y+ ++VHR
Sbjct: 95 EYMAKGSLVDYLRS----RGRSVLGGDCLLKFS------LDVCEAMEYLE---GNNFVHR 141
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMGIDI 559
++ +RN+ + E+ A+V +FG+ + + S Q P W S D+
Sbjct: 142 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 197
Query: 560 FAYGIVLLEVLS-GQTPINRPRKKD 583
+++GI+L E+ S G+ P R KD
Sbjct: 198 WSFGILLWEIYSFGRVPYPRIPLKD 222
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 80/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG+ R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 96/205 (46%), Gaps = 30/205 (14%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-HHPNIVRLLGTCLTDGPHSFLVF 450
G V G G +A+K +++ + + T H N+V+LLG + + ++V
Sbjct: 20 GDVMLGDYRGNKVAVKCIKNDATAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVT 79
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
EY GSL D+L + + + C L +S LDV A++Y+ ++VHR
Sbjct: 80 EYMAKGSLVDYLRS----RGRSVLGGDCLLKFS------LDVCEAMEYLE---GNNFVHR 126
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMGIDI 559
++ +RN+ + E+ A+V +FG+ + + S Q P W S D+
Sbjct: 127 DLAARNVLVSEDNVAKVSDFGLTK----EASSTQDTGKLPVKWTAPEALREKKFSTKSDV 182
Query: 560 FAYGIVLLEVLS-GQTPINRPRKKD 583
+++GI+L E+ S G+ P R KD
Sbjct: 183 WSFGILLWEIYSFGRVPYPRIPLKD 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 112/242 (46%), Gaps = 45/242 (18%)
Query: 361 TAEQHKRLLESYS--IEDLRRATEKFNSSNRIEGAVYHGRLN--GKN---LAIKRTEHEV 413
T E+ R S++ IE R EK S G V +GRL G+ +AIK +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGD-SGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 414 ITKLEMQLVQHAT----HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMK 469
+ + A+ HPNI+RL G +T G + +V EY +NGSL +L
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEG-VVTRGRLAMIVTEYMENGSLDTFLR---THD 145
Query: 470 NQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGN 529
QF T Q + + V ++Y+ + YVHR++ +RN+ +D +V +
Sbjct: 146 GQF--------TIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 530 FGMARCVNDDTESPQFYSTN----PASW-----------SMGIDIFAYGIVLLEVLS-GQ 573
FG++R + DD ++ Y+T P W S D++++G+V+ EVL+ G+
Sbjct: 195 FGLSRVLEDDPDAA--YTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGE 252
Query: 574 TP 575
P
Sbjct: 253 RP 254
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 149
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 62 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 121
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 122 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 167
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 168 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 223
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 224 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 254
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 105
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 106 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 144
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 145 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 204
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 205 SDVWSFGVVLYELFT 219
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 70 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 129
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 130 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 168
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 169 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 228
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 229 SDVWSFGVVLYELFT 243
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 63 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 122
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 123 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 168
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 169 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 224
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 225 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 255
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 102 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 201 SDVWSFGVVLYELFT 215
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 36 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 95
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 96 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 141
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 142 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 197
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 198 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 228
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 103
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 104 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 142
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 143 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 202
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 203 SDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 104
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 105 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 143
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 144 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 203
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 204 SDVWSFGVVLYELFT 218
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 41 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 100
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 101 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 146
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 147 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 202
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 203 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 233
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 99 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 99 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 98
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 99 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 137
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 138 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 197
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 198 SDVWSFGVVLYELFT 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 96
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 97 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 135
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 136 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 195
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 196 SDVWSFGVVLYELFT 210
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 70.1 bits (170), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 97
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 98 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 136
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 137 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 196
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 197 SDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 43 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 102
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 103 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 141
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 142 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 201
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 202 SDVWSFGVVLYELFT 216
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 148
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 204
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 205 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 147
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 203
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 204 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 32/193 (16%)
Query: 397 GRLNGKNLAIKRTEHEV----ITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFE 451
G G+ +A+K + E I L+ ++ +H NIV+ G C DG + L+ E
Sbjct: 46 GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 105
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
+ +GSLK++L KN+ + Q+L+ + + + Y+ + YVHR+
Sbjct: 106 FLPSGSLKEYLPKN---KNK--------INLKQQLKYAVQICKGMDYLG---SRQYVHRD 151
Query: 512 IKSRNIFLDEEFNARVGNFGMARC---------VNDDTESPQFYSTNP----ASWSMGID 558
+ +RN+ ++ E ++G+FG+ + V DD +SP F+ + + + D
Sbjct: 152 LAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASD 211
Query: 559 IFAYGIVLLEVLS 571
++++G+ L E+L+
Sbjct: 212 VWSFGVTLHELLT 224
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 48/183 (26%), Positives = 83/183 (45%), Gaps = 41/183 (22%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPN+++ +G D +F+ EY K G+L+ + +M +Q+ WSQR+
Sbjct: 66 HPNVLKFIGVLYKDKRLNFIT-EYIKGGTLRGIIK---SMDSQY--------PWSQRVSF 113
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
D+A + Y+H + + +HR++ S N + E N V +FG+AR + D+ P+ +
Sbjct: 114 AKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170
Query: 549 ------------------------NPASWSMGIDIFAYGIVLLEVLS--GQTPINRPRKK 582
N S+ +D+F++GIVL E++ P PR
Sbjct: 171 LKKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPRTM 230
Query: 583 DEG 585
D G
Sbjct: 231 DFG 233
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 39 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 98
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 99 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 144
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 145 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 200
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 201 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 231
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 97/211 (45%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 149
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+ +VHR++ +RN LDE+F +V +FG+AR D ++YS + P W
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLAR----DMYDKEYYSVHNKTGAKLPVKWMA 205
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 206 LESLQTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 117 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 155
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 216 SDVWSFGVVLYELFT 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 69.7 bits (169), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/195 (25%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 116
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+D+L Q+ + +D LQY M ++ Y+H
Sbjct: 117 SLRDYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 155
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 156 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 215
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 216 SDVWSFGVVLYELFT 230
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 110/240 (45%), Gaps = 41/240 (17%)
Query: 361 TAEQHKRLLESYS--IEDLRRATEKFNSSNRIEGAVYHGRLN--GKN---LAIKRTEHEV 413
T E+ R S++ IE R EK S G V +GRL G+ +AIK +
Sbjct: 31 TYEEPGRAGRSFTREIEASRIHIEKIIGSGD-SGEVCYGRLRVPGQRDVPVAIKALKAGY 89
Query: 414 ITKLEMQLVQHAT----HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMK 469
+ + A+ HPNI+RL G +T G + +V EY +NGSL +L
Sbjct: 90 TERQRRDFLSEASIMGQFDHPNIIRLEG-VVTRGRLAMIVTEYMENGSLDTFLR---THD 145
Query: 470 NQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGN 529
QF T Q + + V ++Y+ + YVHR++ +RN+ +D +V +
Sbjct: 146 GQF--------TIMQLVGMLRGVGAGMRYLSDL---GYVHRDLAARNVLVDSNLVCKVSD 194
Query: 530 FGMARCVNDDTESPQFYSTN--PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
FG++R + DD ++ + P W S D++++G+V+ EVL+ G+ P
Sbjct: 195 FGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 81/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V EY +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEYMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + +VHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 95/193 (49%), Gaps = 32/193 (16%)
Query: 397 GRLNGKNLAIKRTEHEV----ITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFE 451
G G+ +A+K + E I L+ ++ +H NIV+ G C DG + L+ E
Sbjct: 34 GDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIME 93
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
+ +GSLK++L KN+ + Q+L+ + + + Y+ + YVHR+
Sbjct: 94 FLPSGSLKEYLPKN---KNK--------INLKQQLKYAVQICKGMDYLG---SRQYVHRD 139
Query: 512 IKSRNIFLDEEFNARVGNFGMARC---------VNDDTESPQFYST----NPASWSMGID 558
+ +RN+ ++ E ++G+FG+ + V DD +SP F+ + + + D
Sbjct: 140 LAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLMQSKFYIASD 199
Query: 559 IFAYGIVLLEVLS 571
++++G+ L E+L+
Sbjct: 200 VWSFGVTLHELLT 212
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 91/188 (48%), Gaps = 31/188 (16%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ EY G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYG 101
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRN 516
SL+D+L + Y SQ IC + M ++ Y+HR++ +RN
Sbjct: 102 SLRDYLQAHAERIDHIKLLQYT----SQ---IC-------KGMEYLGTKRYIHRDLATRN 147
Query: 517 IFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMGIDIFAYG 563
I ++ E ++G+FG+ + + D ESP F+ S + +S+ D++++G
Sbjct: 148 ILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFG 207
Query: 564 IVLLEVLS 571
+VL E+ +
Sbjct: 208 VVLYELFT 215
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 94/207 (45%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 43 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 102
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++Y+
Sbjct: 103 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKYL--- 148
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN---PASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D T P W
Sbjct: 149 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL 208
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 209 QTQKFTTKSDVWSFGVLLWELMTRGAP 235
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 108/248 (43%), Gaps = 53/248 (21%)
Query: 366 KRLLESYSIEDLRRATEKFN-----SSNRIEGAVYHG----------RLNGKN---LAIK 407
K ++ ++ ED A +F S +IE + G +L GK +AIK
Sbjct: 8 KIFIDPFTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIK 67
Query: 408 RTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLH 463
+ K + A+ HPN++ L G P ++ E+ +NGSL +L
Sbjct: 68 TLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP-VMIITEFMENGSLDSFLR 126
Query: 464 GGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEF 523
QF T Q + + +A ++Y+ + +YVHR++ +RNI ++
Sbjct: 127 QN---DGQF--------TVIQLVGMLRGIAAGMKYLADM---NYVHRDLAARNILVNSNL 172
Query: 524 NARVGNFGMARCVNDDTESPQFYST----NPASWSM-----------GIDIFAYGIVLLE 568
+V +FG++R + DDT P + S P W+ D+++YGIV+ E
Sbjct: 173 VCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWE 232
Query: 569 VLS-GQTP 575
V+S G+ P
Sbjct: 233 VMSYGERP 240
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 83/165 (50%), Gaps = 37/165 (22%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRL 486
HPN+V L G +T G +V E+ +NG+L +L H G QF T Q +
Sbjct: 103 HPNVVHLEGV-VTRGKPVMIVIEFMENGALDAFLRKHDG-----QF--------TVIQLV 148
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFY 546
+ +A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y
Sbjct: 149 GMLRGIAAGMRYLADM---GYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEA--VY 203
Query: 547 STN----PASWSM-----------GIDIFAYGIVLLEVLS-GQTP 575
+T P W+ D+++YGIV+ EV+S G+ P
Sbjct: 204 TTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 91/203 (44%), Gaps = 38/203 (18%)
Query: 392 GAVYHGR-LNGKNLAIK------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G V+ G LN +AIK +E + I + E+ + HP +V+L G CL P
Sbjct: 22 GLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMM----KLSHPKLVQLYGVCLEQAP 77
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LV E+ ++G L D+L + F A L +CLDV + Y+
Sbjct: 78 IC-LVTEFMEHGCLSDYLR---TQRGLFAAETL--------LGMCLDVCEGMAYLE---E 122
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----------- 553
+HR++ +RN + E +V +FGM R V DD + + P W
Sbjct: 123 ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRY 182
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++G+++ EV S G+ P
Sbjct: 183 SSKSDVWSFGVLMWEVFSEGKIP 205
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 83
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 84 IIIEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 130
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 191 SDVWAFGVLLWEIATYGMSP 210
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V E +NGSL +L A QF T Q + +
Sbjct: 76 HPNIIRLEGVVTKSKP-VMIVTEXMENGSLDSFLRKHDA---QF--------TVIQLVGM 123
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 124 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 178
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 179 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 92/203 (45%), Gaps = 38/203 (18%)
Query: 396 HGRLNGKN---LAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTDGPHSFL 448
H +L GK +AIK + K + A+ HPN++ L G P +
Sbjct: 27 HLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTP-VMI 85
Query: 449 VFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYV 508
+ E+ +NGSL +L QF T Q + + +A ++Y+ + +YV
Sbjct: 86 ITEFMENGSLDSFLRQN---DGQF--------TVIQLVGMLRGIAAGMKYLADM---NYV 131
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST----NPASWSM--------- 555
HR + +RNI ++ +V +FG++R + DDT P + S P W+
Sbjct: 132 HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKF 191
Query: 556 --GIDIFAYGIVLLEVLS-GQTP 575
D+++YGIV+ EV+S G+ P
Sbjct: 192 TSASDVWSYGIVMWEVMSYGERP 214
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V E +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEXMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 86 IIIEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 83
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 84 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 130
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 191 SDVWAFGVLLWEIATYGMSP 210
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 103 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 162
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 163 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 208
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 209 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 268
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 269 QTQKFTTKSDVWSFGVLLWELMTRGAP 295
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 234 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 292
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 293 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 339
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HRN+ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 340 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 399
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 400 SDVWAFGVLLWEIATYGMSP 419
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 392 GAVYHGRLN--GKN---LAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTD 442
G V GRL GK +AIK + K + A+ HPNI+ L G
Sbjct: 28 GEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKC 87
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
P ++ EY +NGSL + F+ T Q + + + ++Y+ +
Sbjct: 88 KP-VMIITEYMENGSL-----------DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 135
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN----PASWSM--- 555
SYVHR++ +RNI ++ +V +FGM+R + DD E+ Y+T P W+
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA--YTTRGGKIPIRWTAPEA 190
Query: 556 --------GIDIFAYGIVLLEVLS-GQTP 575
D+++YGIV+ EV+S G+ P
Sbjct: 191 IAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 86 IIIEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 41/209 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEH-------EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G VY G +A+K H + I + + A HPNI+ L G CL + P
Sbjct: 21 GKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKE-P 79
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
+ LV E+A+ G L L G + + W+ + +A + Y+H
Sbjct: 80 NLCLVMEFARGGPLNRVLSGKRIPPD-------ILVNWA------VQIARGMNYLHDEAI 126
Query: 505 PSYVHRNIKSRNIFLDEEFN--------ARVGNFGMARCVNDDTE----------SPQFY 546
+HR++KS NI + ++ ++ +FG+AR + T+ +P+
Sbjct: 127 VPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAYAWMAPEVI 186
Query: 547 STNPASWSMGIDIFAYGIVLLEVLSGQTP 575
+ +S G D+++YG++L E+L+G+ P
Sbjct: 187 RA--SMFSKGSDVWSYGVLLWELLTGEVP 213
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 94/209 (44%), Gaps = 42/209 (20%)
Query: 392 GAVYHGRLN--GKN---LAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTD 442
G V GRL GK +AIK + K + A+ HPNI+ L G
Sbjct: 22 GEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKC 81
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
P ++ EY +NGSL + F+ T Q + + + ++Y+ +
Sbjct: 82 KP-VMIITEYMENGSL-----------DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM 129
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN----PASWSM--- 555
SYVHR++ +RNI ++ +V +FGM+R + DD E+ Y+T P W+
Sbjct: 130 ---SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAA--YTTRGGKIPIRWTAPEA 184
Query: 556 --------GIDIFAYGIVLLEVLS-GQTP 575
D+++YGIV+ EV+S G+ P
Sbjct: 185 IAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 86
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 87 IIIEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 133
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 193
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 194 SDVWAFGVLLWEIATYGMSP 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/195 (24%), Positives = 92/195 (47%), Gaps = 45/195 (23%)
Query: 401 GKNLAIKRTEH---EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNG 456
G+ +A+K+ +H E + E ++ + H NIV+ G C + G + L+ E+ G
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYG 101
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVMNPSYVH 509
SL+++L Q+ + +D LQY M ++ Y+H
Sbjct: 102 SLREYL---------------------QKHKERIDHIKLLQYTSQICKGMEYLGTKRYIH 140
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT---------ESPQFY----STNPASWSMG 556
R++ +RNI ++ E ++G+FG+ + + D ESP F+ S + +S+
Sbjct: 141 RDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVA 200
Query: 557 IDIFAYGIVLLEVLS 571
D++++G+VL E+ +
Sbjct: 201 SDVWSFGVVLYELFT 215
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 150
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 149
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 22 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTAPQL 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 79 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 124
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 185 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 44 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 103
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 104 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 149
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 150 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 209
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 210 QTQKFTTKSDVWSFGVLLWELMTRGAP 236
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 42 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 101
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 102 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 147
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 148 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 207
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 208 QTQKFTTKSDVWSFGVLLWELMTRGAP 234
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 90
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 91 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 137
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 198 SDVWAFGVLLWEIATYGMSP 217
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 49 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 108
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 109 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 154
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 155 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL 214
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 215 QTQKFTTKSDVWSFGVLLWELMTRGAP 241
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 90
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 91 IIIEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 137
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 198 SDVWAFGVLLWEIATYGMSP 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 27 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 83
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 84 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 190 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 86 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 52/207 (25%), Positives = 97/207 (46%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRL---NGKNL--AIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG L +GK + A+K T+ +++ + + HPN++ LLG CL
Sbjct: 45 GCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRS 104
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+V Y K+G L++++ N + F L VA ++++
Sbjct: 105 EGSPLVVLPYMKHGDLRNFIRN--ETHNPTVKDLIGF---------GLQVAKGMKFL--- 150
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTESPQFYSTNPASW------ 553
+ +VHR++ +RN LDE+F +V +FG+AR + D D+ + + P W
Sbjct: 151 ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL 210
Query: 554 -----SMGIDIFAYGIVLLEVLSGQTP 575
+ D++++G++L E+++ P
Sbjct: 211 QTQKFTTKSDVWSFGVLLWELMTRGAP 237
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 86 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 27 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 83
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 84 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 130 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 189
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 190 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 222
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 96/200 (48%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 25 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 83
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q +++ L + ++ A++Y+ ++
Sbjct: 84 IITEFMTYGNLLDYLR---ECNRQEVSAVVL-------LYMATQISSAMEYLE---KKNF 130
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 131 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIK 190
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 191 SDVWAFGVLLWEIATYGMSP 210
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 79/163 (48%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+ L G P +V EY +NGSL +L QF T Q + +
Sbjct: 82 HPNIIHLEGVVTKSKP-VMIVTEYMENGSLDTFLKKN---DGQF--------TVIQLVGM 129
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
++ ++Y+ + YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 130 LRGISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 184
Query: 549 N----PASWSM-----------GIDIFAYGIVLLEVLS-GQTP 575
P W+ D+++YGIV+ EV+S G+ P
Sbjct: 185 RGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 66.2 bits (160), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 24 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 80
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 81 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 126
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 127 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 186
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 187 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 104/212 (49%), Gaps = 41/212 (19%)
Query: 392 GAVYHGRL--NGKNLAIK-------RTEHEVITKLE---MQLVQHATHHHPNIVRLLGTC 439
G V+ GRL + +AIK E E+I K + ++ + +HPNIV+L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-L 91
Query: 440 LTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM 499
+ + P +V E+ G L ++ + + + WS +LR+ LD+A+ ++YM
Sbjct: 92 MHNPPR--MVMEFVPCGDLY----------HRLLDKAHP-IKWSVKLRLMLDIALGIEYM 138
Query: 500 HHVMNPSYVHRNIKSRNIF---LDEE--FNARVGNFGMAR---------CVNDDTESPQF 545
+ NP VHR+++S NIF LDE A+V +FG+++ N +P+
Sbjct: 139 QN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQWMAPET 197
Query: 546 YSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
S++ D +++ ++L +L+G+ P +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 90
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 137
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 198 SDVWAFGVLLWEIATYGMSP 217
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 96/209 (45%), Gaps = 40/209 (19%)
Query: 392 GAVYHGRLN--GKN---LAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTD 442
G V GRL GK +AIK + + + + A+ HPNI+RL G
Sbjct: 28 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 87
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
P L E+ +NG+L +L QF T Q + + +A ++Y+ +
Sbjct: 88 MPVMILT-EFMENGALDSFLR---LNDGQF--------TVIQLVGMLRGIASGMRYLAEM 135
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST----NPASWSM--- 555
SYVHR++ +RNI ++ +V +FG++R + +++ P + S+ P W+
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 556 --------GIDIFAYGIVLLEVLS-GQTP 575
D ++YGIV+ EV+S G+ P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 50 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 106
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 107 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 152
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 213 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 22 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 79 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 124
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 185 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 49 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 105
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 106 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 151
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 152 IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 211
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 212 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 244
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 231 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 289
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L Q + + L + ++ A++Y+ ++
Sbjct: 290 IITEFMTYGNLLDYLR---ECNRQEVNAVVL-------LYMATQISSAMEYLE---KKNF 336
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HRN+ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 337 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 396
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 397 SDVWAFGVLLWEIATYGMSP 416
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 26 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH A + +F + + I A + Y+H S
Sbjct: 83 AIVTQWCEGSSLYHHLH---ASETKF--------EMKKLIDIARQTARGMDYLH---AKS 128
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF +N
Sbjct: 129 IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 188
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 189 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 221
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 90
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 137
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 198 SDVWAFGVLLWEIATYGMSP 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 97/225 (43%), Gaps = 60/225 (26%)
Query: 384 FNSSNRIEG---AVYHGRLNGKNLAIKRTEHEV--ITKLEMQLVQHATHHHPNIVRLLGT 438
F + N+++ A+ RL + LA ++ EV + KLE HP IVR
Sbjct: 22 FEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLE----------HPGIVRYFNA 71
Query: 439 CLTDG------PHSFLVFEY-----AKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
L P S V+ Y + +LKDW++G ++ + + C L
Sbjct: 72 WLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVC---------LH 122
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
I L +A A++++H + +HR++K NIF + +VG+FG+ ++ D E +
Sbjct: 123 IFLQIAEAVEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLT 179
Query: 548 TNPA----------------------SWSMGIDIFAYGIVLLEVL 570
PA S+S +DIF+ G++L E+L
Sbjct: 180 PMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 273 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 331
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 332 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 378
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HRN+ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 379 IHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 438
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 439 SDVWAFGVLLWEIATYGMSP 458
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 32 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 90
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 91 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 137
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 138 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 197
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 198 SDVWAFGVLLWEIATYGMSP 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 87
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 134
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 195 SDVWAFGVLLWEIATYGMSP 214
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 31 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 89
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 90 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 136
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 137 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 196
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 197 SDVWAFGVLLWEIATYGMSP 216
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 40 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 98
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 99 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 145
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 146 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 205
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 206 SDVWAFGVLLWEIATYGMSP 225
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 95/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C + P +
Sbjct: 46 GEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTLEPPF-Y 104
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
+V EY G+L D+L + + A ++ ++ A++Y+ ++
Sbjct: 105 IVTEYMPYGNLLDYLRE--CNREEVTAVVLLYM--------ATQISSAMEYLE---KKNF 151
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 152 IHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFSIK 211
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 212 SDVWAFGVLLWEIATYGMSP 231
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 38 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTAPQL 94
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH A + +F + + I A + Y+H S
Sbjct: 95 AIVTQWCEGSSLYHHLH---ASETKF--------EMKKLIDIARQTARGMDYLH---AKS 140
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF +N
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 201 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 27 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 85
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 86 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 132
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 133 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 192
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 193 SDVWAFGVLLWEIATYGMSP 212
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 91/186 (48%), Gaps = 30/186 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFI--ASCYC-FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
+N+F+ Y FLT + VA ++++ + +HR++ +RNI L E+
Sbjct: 127 RNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVV 183
Query: 526 RVGNFGMARCVNDDTESPQFYSTN----PASW-----------SMGIDIFAYGIVLLEVL 570
++ +FG+AR + D P + P W ++ D++++G++L E+
Sbjct: 184 KIXDFGLARDIYKD---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 240
Query: 571 S-GQTP 575
S G +P
Sbjct: 241 SLGASP 246
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 87
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 134
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIK 194
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 195 SDVWAFGVLLWEIATYGMSP 214
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 28 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 86
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 87 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 133
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 134 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 193
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 194 SDVWAFGVLLWEIATYGMSP 213
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 88/187 (47%), Gaps = 42/187 (22%)
Query: 410 EHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNGSLKDWL--HG-G 465
+H K E+ +++ T +H +I++ G C G S LV EY GSL+D+L H G
Sbjct: 58 QHRSGWKQEIDILR--TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG 115
Query: 466 LAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
LA Q L + + Y+H + Y+HRN+ +RN+ LD +
Sbjct: 116 LA----------------QLLLFAQQICEGMAYLH---SQHYIHRNLAARNVLLDNDRLV 156
Query: 526 RVGNFGMARC---------VNDDTESPQFYST----NPASWSMGIDIFAYGIVLLEVL-- 570
++G+FG+A+ V +D +SP F+ + D++++G+ L E+L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 571 --SGQTP 575
S Q+P
Sbjct: 217 CDSSQSP 223
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 103/212 (48%), Gaps = 41/212 (19%)
Query: 392 GAVYHGRL--NGKNLAIK-------RTEHEVITKLE---MQLVQHATHHHPNIVRLLGTC 439
G V+ GRL + +AIK E E+I K + ++ + +HPNIV+L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-L 91
Query: 440 LTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM 499
+ + P +V E+ G L ++ + + + WS +LR+ LD+A+ ++YM
Sbjct: 92 MHNPPR--MVMEFVPCGDLY----------HRLLDKAHP-IKWSVKLRLMLDIALGIEYM 138
Query: 500 HHVMNPSYVHRNIKSRNIF---LDEE--FNARVGNFGMAR---------CVNDDTESPQF 545
+ NP VHR+++S NIF LDE A+V +FG ++ N +P+
Sbjct: 139 QN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQWMAPET 197
Query: 546 YSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
S++ D +++ ++L +L+G+ P +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 22 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 79 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 124
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 125 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 184
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 185 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 26/195 (13%)
Query: 400 NGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS-FLVFEYA 453
+GK L K ++ +T+ E Q++ + HPNIVR + + ++V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY--VHRN 511
+ G L + G + Q++ + LR+ + +AL+ H + + +HR+
Sbjct: 90 EGGDLASVITKG-TKERQYLDEEFV-------LRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 512 IKSRNIFLDEEFNARVGNFGMARCVNDDTE-------SPQFYS---TNPASWSMGIDIFA 561
+K N+FLD + N ++G+FG+AR +N DT +P + S N S++ DI++
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 562 YGIVLLEVLSGQTPI 576
G +L E+ + P
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 94/195 (48%), Gaps = 26/195 (13%)
Query: 400 NGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS-FLVFEYA 453
+GK L K ++ +T+ E Q++ + HPNIVR + + ++V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY--VHRN 511
+ G L + G + Q++ + LR+ + +AL+ H + + +HR+
Sbjct: 90 EGGDLASVITKG-TKERQYLDEEFV-------LRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 512 IKSRNIFLDEEFNARVGNFGMARCVNDDTE-------SPQFYS---TNPASWSMGIDIFA 561
+K N+FLD + N ++G+FG+AR +N DT +P + S N S++ DI++
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 562 YGIVLLEVLSGQTPI 576
G +L E+ + P
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 42 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 98
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 99 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 144
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 145 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 204
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 205 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 98/215 (45%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 50 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 106
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH I + + + + + I A + Y+H S
Sbjct: 107 AIVTQWCEGSSLYHHLH--------IIETKFEMI---KLIDIARQTAQGMDYLH---AKS 152
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF N
Sbjct: 153 IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKN 212
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 213 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 245
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 99/215 (46%), Gaps = 41/215 (19%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS 446
G VY G+ +G ++A+K T ++Q ++ H NI+ +G + P
Sbjct: 38 GTVYKGKWHG-DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG--YSTKPQL 94
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V ++ + SL LH A + +F + + I A + Y+H S
Sbjct: 95 AIVTQWCEGSSLYHHLH---ASETKF--------EMKKLIDIARQTARGMDYLH---AKS 140
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQF-----------------YSTN 549
+HR++KS NIFL E+ ++G+FG+A + + S QF +N
Sbjct: 141 IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSN 200
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
P +S D++A+GIVL E+++GQ P + +D+
Sbjct: 201 P--YSFQSDVYAFGIVLYELMTGQLPYSNINNRDQ 233
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 94/200 (47%), Gaps = 30/200 (15%)
Query: 392 GAVYHGRLNGKNLAIK-RTEHEVITKLEMQLVQHATHH---HPNIVRLLGTCLTDGPHSF 447
G VY G +L + +T E ++E L + A HPN+V+LLG C T P +
Sbjct: 29 GEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFY 87
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ E+ G+L D+L + + Y + ++ A++Y+ ++
Sbjct: 88 IITEFMTYGNLLDYLRECNRQEVNAVVLLY----------MATQISSAMEYLE---KKNF 134
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMG 556
+HR++ +RN + E +V +FG++R + DT + + P W S+
Sbjct: 135 IHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIK 194
Query: 557 IDIFAYGIVLLEVLS-GQTP 575
D++A+G++L E+ + G +P
Sbjct: 195 SDVWAFGVLLWEIATYGMSP 214
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 91/185 (49%), Gaps = 26/185 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 74 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 128
Query: 469 KNQFI----ASCYC-FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEF 523
+N+F+ Y FLT + VA ++++ + +HR++ +RNI L E+
Sbjct: 129 RNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKN 185
Query: 524 NARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEVLS 571
++ +FG+AR + D + + P W ++ D++++G++L E+ S
Sbjct: 186 VVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFS 245
Query: 572 -GQTP 575
G +P
Sbjct: 246 LGASP 250
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 108/248 (43%), Gaps = 55/248 (22%)
Query: 366 KRLLESYSIEDLRRATEKFN-----SSNRIE--------GAVYHGRLN--GKN---LAIK 407
+ ++ ++ ED +A +F S +IE G V GRL GK +AIK
Sbjct: 4 RTFVDPFTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIK 63
Query: 408 RTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLH 463
+ K + A+ HPNI+ L G P ++ EY +NGSL
Sbjct: 64 TLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKP-VMIITEYMENGSL----- 117
Query: 464 GGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEF 523
+ F+ T Q + + + ++Y+ + S VHR++ +RNI ++
Sbjct: 118 ------DAFLRKNDGRFTVIQLVGMLRGIGSGMKYLSDM---SAVHRDLAARNILVNSNL 168
Query: 524 NARVGNFGMARCVNDDTESPQFYSTN----PASWSM-----------GIDIFAYGIVLLE 568
+V +FGM+R + DD E+ Y+T P W+ D+++YGIV+ E
Sbjct: 169 VCKVSDFGMSRVLEDDPEAA--YTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 226
Query: 569 VLS-GQTP 575
V+S G+ P
Sbjct: 227 VMSYGERP 234
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 81/169 (47%), Gaps = 30/169 (17%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF-------- 479
+HP++++L G C DGP L+ EYAK GSL+ +L + ++ S
Sbjct: 84 NHPHVIKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 480 ----LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC 535
LT + ++ +QY+ + S VHR++ +RNI + E ++ +FG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 536 V-NDDTESPQFYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
V +D+ + P W M I D++++G++L E+++
Sbjct: 200 VYEEDSXVKRSQGRIPVKW-MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 94/209 (44%), Gaps = 40/209 (19%)
Query: 392 GAVYHGRLN--GKN---LAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCLTD 442
G V GRL GK +AIK + + + + A+ HPNI+RL G
Sbjct: 30 GEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLEGVVTNS 89
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
P L E+ +NG+L +L QF T Q + + +A ++Y+ +
Sbjct: 90 MPVMILT-EFMENGALDSFLR---LNDGQF--------TVIQLVGMLRGIASGMRYLAEM 137
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV----NDDTESPQFYSTNPASWSM--- 555
SYVHR++ +RNI ++ +V +FG++R + +D TE+ P W+
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 556 --------GIDIFAYGIVLLEVLS-GQTP 575
D ++YGIV+ EV+S G+ P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 79/163 (48%), Gaps = 33/163 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI+RL G P +V E +NGSL +L A QF T Q + +
Sbjct: 105 HPNIIRLEGVVTKSKP-VMIVTEXMENGSLDSFLRKHDA---QF--------TVIQLVGM 152
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+A ++Y+ + VHR++ +RNI ++ +V +FG++R + DD E+ Y+T
Sbjct: 153 LRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAA--YTT 207
Query: 549 N----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W + D+++YGIVL EV+S G+ P
Sbjct: 208 RGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 87/187 (46%), Gaps = 42/187 (22%)
Query: 410 EHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNGSLKDWL--HG-G 465
+H K E+ +++ T +H +I++ G C G S LV EY GSL+D+L H G
Sbjct: 58 QHRSGWKQEIDILR--TLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIG 115
Query: 466 LAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
LA Q L + + Y+H Y+HRN+ +RN+ LD +
Sbjct: 116 LA----------------QLLLFAQQICEGMAYLH---AQHYIHRNLAARNVLLDNDRLV 156
Query: 526 RVGNFGMARC---------VNDDTESPQFYST----NPASWSMGIDIFAYGIVLLEVL-- 570
++G+FG+A+ V +D +SP F+ + D++++G+ L E+L
Sbjct: 157 KIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 216
Query: 571 --SGQTP 575
S Q+P
Sbjct: 217 CDSSQSP 223
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 41/212 (19%)
Query: 392 GAVYHGRL--NGKNLAIK-------RTEHEVITKLE---MQLVQHATHHHPNIVRLLGTC 439
G V+ GRL + +AIK E E+I K + ++ + +HPNIV+L G
Sbjct: 33 GLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYG-L 91
Query: 440 LTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM 499
+ + P +V E+ G D H L + + WS +LR+ LD+A+ ++YM
Sbjct: 92 MHNPPR--MVMEFVPCG---DLYHRLLDKAHP--------IKWSVKLRLMLDIALGIEYM 138
Query: 500 HHVMNPSYVHRNIKSRNIF---LDEE--FNARVGNFGMAR---------CVNDDTESPQF 545
+ NP VHR+++S NIF LDE A+V +F +++ N +P+
Sbjct: 139 QN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQWMAPET 197
Query: 546 YSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
S++ D +++ ++L +L+G+ P +
Sbjct: 198 IGAEEESYTEKADTYSFAMILYTILTGEGPFD 229
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 94/195 (48%), Gaps = 26/195 (13%)
Query: 400 NGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHS-FLVFEYA 453
+GK L K ++ +T+ E Q++ + HPNIVR + + ++V EY
Sbjct: 30 DGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYC 89
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY--VHRN 511
+ G L + G + Q++ + LR+ + +AL+ H + + +HR+
Sbjct: 90 EGGDLASVITKG-TKERQYLDEEFV-------LRVMTQLTLALKECHRRSDGGHTVLHRD 141
Query: 512 IKSRNIFLDEEFNARVGNFGMARCVNDDTE-------SPQFYS---TNPASWSMGIDIFA 561
+K N+FLD + N ++G+FG+AR +N D + +P + S N S++ DI++
Sbjct: 142 LKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWS 201
Query: 562 YGIVLLEVLSGQTPI 576
G +L E+ + P
Sbjct: 202 LGCLLYELCALMPPF 216
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 103/212 (48%), Gaps = 47/212 (22%)
Query: 392 GAVYHGRL---NGKN---LAIKR-----TEHEVITKL-EMQLVQHATHHHPNIVRLLGTC 439
G VY G L +GK +AIK TE + + L E ++ +HH NI+RL G
Sbjct: 58 GEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH--NIIRLEGVI 115
Query: 440 LTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM 499
P ++ EY +NG+L ++F+ + Q + + +A ++Y+
Sbjct: 116 SKYKPM-MIITEYMENGAL-----------DKFLREKDGEFSVLQLVGMLRGIAAGMKYL 163
Query: 500 HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN----PASWSM 555
N +YVHR++ +RNI ++ +V +FG++R + DD E+ Y+T+ P W+
Sbjct: 164 A---NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAT--YTTSGGKIPIRWTA 218
Query: 556 -----------GIDIFAYGIVLLEVLS-GQTP 575
D++++GIV+ EV++ G+ P
Sbjct: 219 PEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 91/183 (49%), Gaps = 24/183 (13%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFI--ASCYC-FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
+N+F+ Y FLT + VA ++++ + +HR++ +RNI L E+
Sbjct: 127 RNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKXIHRDLAARNILLSEKNVV 183
Query: 526 RVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEVLS-G 572
++ +FG+AR + D + + P W ++ D++++G++L E+ S G
Sbjct: 184 KICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLG 243
Query: 573 QTP 575
+P
Sbjct: 244 ASP 246
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 184 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 570 LS-GQTP 575
S G +P
Sbjct: 244 FSLGASP 250
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF-------- 479
+HP++++L G C DGP L+ EYAK GSL+ +L + ++ S
Sbjct: 84 NHPHVIKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 480 ----LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC 535
LT + ++ +QY+ + VHR++ +RNI + E ++ +FG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 536 V-NDDTESPQFYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
V +D+ + P W M I D++++G++L E+++
Sbjct: 200 VYEEDSXVKRSQGRIPVKW-MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 63 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 117
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 570 LS-GQTP 575
S G +P
Sbjct: 235 FSLGASP 241
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 184 KNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 570 LS-GQTP 575
S G +P
Sbjct: 244 FSLGASP 250
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/191 (22%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E R+ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMRIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 54 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 109
Query: 462 LHGGLAMKNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
L A + + CY L+ + VA ++Y+ + +HR++ +
Sbjct: 110 LQ---ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 163
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGID 558
RN+ + E+ ++ +FG+AR D +Y +TN P W + D
Sbjct: 164 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 219
Query: 559 IFAYGIVLLEVLS-GQTP 575
++++G++L E+ + G +P
Sbjct: 220 VWSFGVLLWEIFTLGGSP 237
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 93/219 (42%), Gaps = 47/219 (21%)
Query: 392 GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQLVQHAT----HHHPNIVRLLGTCL 440
G V+ R G +A+K + E ++ + A +PNIV+LLG C
Sbjct: 61 GRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCA 120
Query: 441 TDGPHSFLVFEYAKNGSLKDWL------------HGGLAMKNQFIASCYCFLTWSQRLRI 488
P L+FEY G L ++L H L+ + + + L+ +++L I
Sbjct: 121 VGKPMC-LLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCI 179
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
VA + Y+ +VHR++ +RN + E ++ +FG++R + S +Y
Sbjct: 180 ARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSR----NIYSADYYKA 232
Query: 549 N-----PASW-----------SMGIDIFAYGIVLLEVLS 571
+ P W + D++AYG+VL E+ S
Sbjct: 233 DGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFS 271
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 62.4 bits (150), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF-------- 479
+HP++++L G C DGP L+ EYAK GSL+ +L + ++ S
Sbjct: 84 NHPHVIKLYGACSQDGP-LLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHP 142
Query: 480 ----LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC 535
LT + ++ +QY+ + VHR++ +RNI + E ++ +FG++R
Sbjct: 143 DERALTMGDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRD 199
Query: 536 V-NDDTESPQFYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
V +D+ + P W M I D++++G++L E+++
Sbjct: 200 VYEEDSYVKRSQGRIPVKW-MAIESLFDHIYTTQSDVWSFGVLLWEIVT 247
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 96/198 (48%), Gaps = 38/198 (19%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 69 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 124
Query: 462 LHGGLAMKNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
L A + + CY L+ + VA ++Y+ + +HR++ +
Sbjct: 125 LQ---ARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAA 178
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGID 558
RN+ + E+ ++ +FG+AR D +Y +TN P W + D
Sbjct: 179 RNVLVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSD 234
Query: 559 IFAYGIVLLEVLS-GQTP 575
++++G++L E+ + G +P
Sbjct: 235 VWSFGVLLWEIFTLGGSP 252
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 109 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 163
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 164 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 220
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 221 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 280
Query: 570 LS-GQTP 575
S G +P
Sbjct: 281 FSLGASP 287
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 91/186 (48%), Gaps = 27/186 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 73 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 127
Query: 469 KNQFI-----ASCYC-FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEE 522
+N+F+ Y FLT + VA ++++ + +HR++ +RNI L E+
Sbjct: 128 RNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEK 184
Query: 523 FNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEVL 570
++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 185 NVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIF 244
Query: 571 S-GQTP 575
S G +P
Sbjct: 245 SLGASP 250
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 93/196 (47%), Gaps = 35/196 (17%)
Query: 400 NGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNG 456
GK +A+K+ + + E+ ++V +HH N+V + + L G ++V E+ + G
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLV-GDELWVVMEFLEGG 127
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRN 516
+L D + M + IA+ +CL V AL Y+H N +HR+IKS +
Sbjct: 128 ALTDIV-THTRMNEEQIAT------------VCLSVLRALSYLH---NQGVIHRDIKSDS 171
Query: 517 IFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAYGI 564
I L + ++ +FG V+ + +P+ S P + +DI++ GI
Sbjct: 172 ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEVISRLP--YGTEVDIWSLGI 229
Query: 565 VLLEVLSGQTP-INRP 579
+++E++ G+ P N P
Sbjct: 230 MVIEMIDGEPPYFNEP 245
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 63 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SK 117
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 175 KNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 570 LS-GQTP 575
S G +P
Sbjct: 235 FSLGASP 241
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 23 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 79 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 125
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HRN+++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 185
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 186 KSDVWSFGILLTEIVTHGRIP 206
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 109/265 (41%), Gaps = 47/265 (17%)
Query: 339 TTSDKKVSFEGSQSTIEGQIIDTAE-QHKRLL---ESYSIEDLRRATEKFNSSNRIEGAV 394
T+ DK S E D E + K+L ++ I D+ F S + V
Sbjct: 300 TSPDKPRPMPMDTSVFESPFSDPEELKDKKLFLKRDNLLIADIELGCGNFGS---VRQGV 356
Query: 395 YHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----PNIVRLLGTCLTDGPHSFLVF 450
Y R ++AIK + ++++ A H P IVRL+G C + LV
Sbjct: 357 YRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQAEA--LMLVM 414
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
E A G L +L G K + I S + V+M ++Y+ ++VHR
Sbjct: 415 EMAGGGPLHKFLVG----KREEIPV-------SNVAELLHQVSMGMKYLE---EKNFVHR 460
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-----PASW-----------S 554
N+ +RN+ L A++ +FG+++ + D +Y+ P W S
Sbjct: 461 NLAARNVLLVNRHYAKISDFGLSKALGADD---SYYTARSAGKWPLKWYAPECINFRKFS 517
Query: 555 MGIDIFAYGIVLLEVLS-GQTPINR 578
D+++YG+ + E LS GQ P +
Sbjct: 518 SRSDVWSYGVTMWEALSYGQKPYKK 542
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 127 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 183
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 184 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 243
Query: 570 LS-GQTP 575
S G +P
Sbjct: 244 FSLGASP 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 92/187 (49%), Gaps = 42/187 (22%)
Query: 410 EHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVFEYAKNGSLKDWL--HG-G 465
+H K E+ +++ T +H +I++ G C G S LV EY GSL+D+L H G
Sbjct: 75 QHRSGWKQEIDILR--TLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIG 132
Query: 466 LAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
LA L ++Q+ IC +A Y+H Y+HR++ +RN+ LD +
Sbjct: 133 LAQ----------LLLFAQQ--ICEGMA----YLH---AQHYIHRDLAARNVLLDNDRLV 173
Query: 526 RVGNFGMARC---------VNDDTESPQFYST----NPASWSMGIDIFAYGIVLLEVL-- 570
++G+FG+A+ V +D +SP F+ + D++++G+ L E+L
Sbjct: 174 KIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTH 233
Query: 571 --SGQTP 575
S Q+P
Sbjct: 234 CDSSQSP 240
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 74 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 128
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 129 RNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 185
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 186 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 245
Query: 570 LS-GQTP 575
S G +P
Sbjct: 246 FSLGASP 252
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 34/179 (18%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HGGLAMKNQFIAS 475
E +L+ + H H IV+ G C+ P +VFEY K+G L +L HG A+ +A
Sbjct: 65 EAELLTNLQHEH--IVKFYGVCVEGDP-LIMVFEYMKHGDLNKFLRAHGPDAV---LMAE 118
Query: 476 CY--CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
LT SQ L I +A + Y+ + +VHR++ +RN + E ++G+FGM+
Sbjct: 119 GNPPTELTQSQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMS 175
Query: 534 RCVNDDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
R D S +Y P W + D+++ G+VL E+ + G+ P
Sbjct: 176 R----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 34/168 (20%)
Query: 426 THHHPNIVRLLGTCLTDGPHSF-LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
T +H +IV+ G C G S LV EY GSL+D+L +C + +Q
Sbjct: 67 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------PRHC-VGLAQ 113
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC--------- 535
L + + Y+H Y+HR + +RN+ LD + ++G+FG+A+
Sbjct: 114 LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 170
Query: 536 VNDDTESPQFYST----NPASWSMGIDIFAYGIVLLEVL----SGQTP 575
V +D +SP F+ + D++++G+ L E+L S Q+P
Sbjct: 171 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 218
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVIEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 78/168 (46%), Gaps = 34/168 (20%)
Query: 426 THHHPNIVRLLGTCLTDGPHSF-LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
T +H +IV+ G C G S LV EY GSL+D+L +C + +Q
Sbjct: 66 TLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL------------PRHC-VGLAQ 112
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC--------- 535
L + + Y+H Y+HR + +RN+ LD + ++G+FG+A+
Sbjct: 113 LLLFAQQICEGMAYLH---AQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYR 169
Query: 536 VNDDTESPQFYST----NPASWSMGIDIFAYGIVLLEVL----SGQTP 575
V +D +SP F+ + D++++G+ L E+L S Q+P
Sbjct: 170 VREDGDSPVFWYAPECLKECKFYYASDVWSFGVTLYELLTYCDSNQSP 217
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 122 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 177
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 178 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 234
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 235 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 294
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 295 MWEIFTLGGSP 305
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 63 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SK 117
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 570 LS-GQTP 575
S G +P
Sbjct: 235 FSLGASP 241
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 90/187 (48%), Gaps = 28/187 (14%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 63 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVITEFCKFGNLSTYLR---SK 117
Query: 469 KNQFIASCYC-------FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
+N+F+ FLT + VA ++++ + +HR++ +RNI L E
Sbjct: 118 RNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSE 174
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEV 569
+ ++ +FG+AR + D + + P W ++ D++++G++L E+
Sbjct: 175 KNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEI 234
Query: 570 LS-GQTP 575
S G +P
Sbjct: 235 FSLGASP 241
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 88
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 135
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 196 KSDVWSFGILLTEIVTHGRIP 216
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIIHLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 35 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 90
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 91 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 137
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 138 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 197
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 198 KSDVWSFGILLTEIVTHGRIP 218
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 65 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 120
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 121 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 177
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 178 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 237
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 238 MWEIFTLGGSP 248
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 392 GAVYHGRLNGKN--LAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPH 445
G V+ GRL N +A+K + L+ + +Q A + HPNIVRL+G C P
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP- 186
Query: 446 SFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNP 505
++V E + G D+L F+ + L L++ D A ++Y+ +
Sbjct: 187 IYIVMELVQGG---DFL--------TFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SK 232
Query: 506 SYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT--------ESPQFYST----NPASW 553
+HR++ +RN + E+ ++ +FGM+R D + P ++ N +
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRY 292
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++GI+L E S G +P
Sbjct: 293 SSESDVWSFGILLWETFSLGASP 315
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVIEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 68 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 123
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 124 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 180
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 181 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 240
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 241 MWEIFTLGGSP 251
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 58 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 113
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 114 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 170
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 171 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 226
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 227 FGVLLWEIFTLGGSP 241
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 34/203 (16%)
Query: 392 GAVYHGRLNGKN--LAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCLTDGPH 445
G V+ GRL N +A+K + L+ + +Q A + HPNIVRL+G C P
Sbjct: 128 GEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQP- 186
Query: 446 SFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNP 505
++V E + G D+L F+ + L L++ D A ++Y+ +
Sbjct: 187 IYIVMELVQGG---DFL--------TFLRTEGARLRVKTLLQMVGDAAAGMEYLE---SK 232
Query: 506 SYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT--------ESPQFYST----NPASW 553
+HR++ +RN + E+ ++ +FGM+R D + P ++ N +
Sbjct: 233 CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRY 292
Query: 554 SMGIDIFAYGIVLLEVLS-GQTP 575
S D++++GI+L E S G +P
Sbjct: 293 SSESDVWSFGILLWETFSLGASP 315
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 61 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 116
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 117 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 173
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 174 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 229
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 230 FGVLLWEIFTLGGSP 244
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 36 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 91
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 92 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 138
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 198
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 199 KSDVWSFGILLTEIVTHGRIP 219
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIITLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 69 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 124
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 125 LQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 238 FGVLLWEIFTLGGSP 252
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 63 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 118
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 119 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLTARNV 175
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 176 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 235
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 236 MWEIFTLGGSP 246
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 69 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 124
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 125 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 182 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 237
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 238 FGVLLWEIFTLGGSP 252
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 29 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 84
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 85 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 131
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 191
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 192 KSDVWSFGILLTEIVTHGRIP 212
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 62 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 117
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 118 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 174
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 175 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 230
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 231 FGVLLWEIFTLGGSP 245
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/195 (22%), Positives = 95/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E ++ +FG+AR +N+ +Y +TN P W + D+++
Sbjct: 189 LVTENNVMKIADFGLARDINN----IDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWS 244
Query: 562 YGIVLLEVLS-GQTP 575
+G+++ E+ + G +P
Sbjct: 245 FGVLMWEIFTLGGSP 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 28 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 83
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 84 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 130
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTI 190
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 191 KSDVWSFGILLTEIVTHGRIP 211
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 33 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 88
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 89 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 135
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 136 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 195
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 196 KSDVWSFGILLTEIVTHGRIP 216
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 32 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 88 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 135 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 195 KSDVWSFGILLTEIVTHGRIP 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 23 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 79 YIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 125
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 126 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 186 KSDVWSFGILLTELTTKGRVPYPGMVNR 213
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 22 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 77
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 78 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 124
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 184
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 185 KSDVWSFGILLTEIVTHGRIP 205
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 91/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 69 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 124
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 125 LQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 181
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E+ ++ +FG+AR ++ D P W + D++++G++
Sbjct: 182 LVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
Query: 566 LLEVLS-GQTP 575
L E+ + G +P
Sbjct: 242 LWEIFTLGGSP 252
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 21 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 76
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 77 YIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 123
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 124 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 183
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 184 KSDVWSFGILLTELTTKGRVPYPGMVNR 211
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A + ++++++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 76 KDDATEEDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 37 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 92
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 93 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 139
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 140 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 199
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 200 KSDVWSFGILLTEIVTHGRIP 220
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 82/179 (45%), Gaps = 31/179 (17%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HG--GLAMKNQFI 473
E +L+ + H H IV+ G C DG +VFEY K+G L +L HG + + +
Sbjct: 67 EAELLTNLQHEH--IVKFYGVC-GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQP 123
Query: 474 ASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
L SQ L I +A + Y+ + +VHR++ +RN + ++G+FGM+
Sbjct: 124 RQAKGELGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMS 180
Query: 534 RCVNDDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
R D S +Y P W + D++++G++L E+ + G+ P
Sbjct: 181 R----DVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQP 235
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 94/195 (48%), Gaps = 32/195 (16%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++I+++EM H NI+ LLG C DGP +++ EYA G+L+++
Sbjct: 110 KSDATEKDLSDLISEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVEYASKGNLREY 165
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L GL + L+ + VA ++Y+ + +HR++ +RN+
Sbjct: 166 LQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYL---ASKKCIHRDLAARNV 222
Query: 518 FLDEEFNARVGNFGMARCVNDDTESPQFY--STN---PASW-----------SMGIDIFA 561
+ E+ ++ +FG+AR D +Y +TN P W + D+++
Sbjct: 223 LVTEDNVMKIADFGLAR----DIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWS 278
Query: 562 YGIVLLEVLS-GQTP 575
+G++L E+ + G +P
Sbjct: 279 FGVLLWEIFTLGGSP 293
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 100/208 (48%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVCEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 99/201 (49%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEE---RN 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D+ + + + P W ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 98/201 (48%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNG-KNLAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +A+K + ++ E L++ H +VRL +T P
Sbjct: 27 GEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQR--LVRLYA-VVTQEP-I 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ EY +NGSL D+L +K LT ++ L + +A + ++ +
Sbjct: 83 YIITEYMENGSLVDFLKTPSGIK----------LTINKLLDMAAQIAEGMAFIEER---N 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR++++ NI + + + ++ +FG+AR + D + + + P W ++
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTI 189
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 190 KSDVWSFGILLTEIVTHGRIP 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 281 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYA-VVSEEP-I 336
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 337 YIVTEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 383
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 384 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 443
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 444 KSDVWSFGILLTELTTKGRVPYPGMVNR 471
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 392 GAVYHGRL-----NGKNLAIKR----TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VYHG N AIK TE + + + + +HPN++ L+G L
Sbjct: 35 GVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPP 94
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
++ Y +G L QFI S T + L VA ++Y+
Sbjct: 95 EGLPHVLLPYMCHGDLL-----------QFIRSPQRNPTVKDLISFGLQVARGMEYL--- 140
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW-- 553
+VHR++ +RN LDE F +V +FG+AR + D ++YS P W
Sbjct: 141 AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDR----EYYSVQQHRHARLPVKWTA 196
Query: 554 ---------SMGIDIFAYGIVLLEVLSGQTPINR 578
+ D++++G++L E+L+ P R
Sbjct: 197 LESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYR 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HG---GLAMKNQF 472
E +L+ H H IVR G C T+G +VFEY ++G L +L HG L +
Sbjct: 93 EAELLTMLQHQH--IVRFFGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 149
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+A L Q L + VA + Y+ + +VHR++ +RN + + ++G+FGM
Sbjct: 150 VAPGP--LGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGM 204
Query: 533 ARCVNDDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+R D S +Y P W + D++++G+VL E+ + G+ P
Sbjct: 205 SR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 25 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 80
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 81 YIVTEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 127
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 128 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 187
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 188 KSDVWSFGILLTELTTKGRVPYPGMVNR 215
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY G L D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVMEYMSKGCLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++ + NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 253
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNR 388
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 84
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGK----------YLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNR 219
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HG---GLAMKNQF 472
E +L+ H H IVR G C T+G +VFEY ++G L +L HG L +
Sbjct: 70 EAELLTMLQHQH--IVRFFGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 126
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+A L Q L + VA + Y+ + +VHR++ +RN + + ++G+FGM
Sbjct: 127 VAPGP--LGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGM 181
Query: 533 ARCVNDDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+R D S +Y P W + D++++G+VL E+ + G+ P
Sbjct: 182 SR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 34/180 (18%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HG---GLAMKNQF 472
E +L+ H H IVR G C T+G +VFEY ++G L +L HG L +
Sbjct: 64 EAELLTMLQHQH--IVRFFGVC-TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGED 120
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+A L Q L + VA + Y+ + +VHR++ +RN + + ++G+FGM
Sbjct: 121 VAPGP--LGLGQLLAVASQVAAGMVYLAGL---HFVHRDLATRNCLVGQGLVVKIGDFGM 175
Query: 533 ARCVNDDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+R D S +Y P W + D++++G+VL E+ + G+ P
Sbjct: 176 SR----DIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 253
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 254 YIVTEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNR 388
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ YA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVAYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 29 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 84
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 85 YIVTEYMNKGSLLDFLKGETGK----------YLRLPQLVDMSAQIASGMAYVERM---N 131
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 132 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI 191
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 192 KSDVWSFGILLTELTTKGRVPYPGMVNR 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 49/216 (22%)
Query: 392 GAVYHGRLNG-------KNLAIK----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCL 440
G VY G L G + +AIK + E + + + + A HPN+V LLG
Sbjct: 23 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 82
Query: 441 TDGPHSFLVFEYAKNGSLKDWL-----HG--GLAMKNQFIASCYCFLTWSQRLRICLDVA 493
D P S ++F Y +G L ++L H G ++ + S L + + +A
Sbjct: 83 KDQPLS-MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA---LEPPDFVHLVAQIA 138
Query: 494 MALQYM--HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFY----- 546
++Y+ HHV VH+++ +RN+ + ++ N ++ + G+ R + + +Y
Sbjct: 139 AGMEYLSSHHV-----VHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLGN 189
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS 571
S P W S+ DI++YG+VL EV S
Sbjct: 190 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 225
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 198 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 253
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 254 YIVGEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 300
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 301 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 360
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 361 KSDVWSFGILLTELTTKGRVPYPGMVNR 388
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 97/216 (44%), Gaps = 49/216 (22%)
Query: 392 GAVYHGRLNG-------KNLAIK----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCL 440
G VY G L G + +AIK + E + + + + A HPN+V LLG
Sbjct: 40 GKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVT 99
Query: 441 TDGPHSFLVFEYAKNGSLKDWL-----HG--GLAMKNQFIASCYCFLTWSQRLRICLDVA 493
D P S ++F Y +G L ++L H G ++ + S L + + +A
Sbjct: 100 KDQPLS-MIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA---LEPPDFVHLVAQIA 155
Query: 494 MALQYM--HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFY----- 546
++Y+ HHV VH+++ +RN+ + ++ N ++ + G+ R + + +Y
Sbjct: 156 AGMEYLSSHHV-----VHKDLATRNVLVYDKLNVKISDLGLFR----EVYAADYYKLLGN 206
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS 571
S P W S+ DI++YG+VL EV S
Sbjct: 207 SLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFS 242
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 426 THHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL---HGGLAMKNQFIASCYCFLTW 482
T H +VRL + P +++ EY GSL D+L GG + + I
Sbjct: 64 TLQHDKLVRLYAVVTREEP-IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS------ 116
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES 542
A + M ++ +Y+HR++++ N+ + E ++ +FG+AR + D+ +
Sbjct: 117 ----------AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 166
Query: 543 PQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+ + P W ++ D++++GI+L E+++ G+ P
Sbjct: 167 AREGAKFPIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCY 477
E++++ H H NIV LLG C GP ++ EY G L ++L + A
Sbjct: 99 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-CV 536
T S R + +A Q M + + + +HR++ +RN+ L A++G+FG+AR +
Sbjct: 157 ANSTLSTRDLLHFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 537 NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
ND + + P W ++ D+++YGI+L E+ S
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/195 (23%), Positives = 84/195 (43%), Gaps = 33/195 (16%)
Query: 399 LNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHSFLVFEYA 453
L G+ +AIK + + +Q + +HPNIV+L T+ +L+ EYA
Sbjct: 35 LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTLYLIMEYA 93
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G + D+L MK + S + + A+QY H VHR++K
Sbjct: 94 SGGEVFDYLVAHGRMKEKEARSKFR------------QIVSAVQYCHQ---KRIVHRDLK 138
Query: 514 SRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIFAY 562
+ N+ LD + N ++ +FG + C + +P+ + +D+++
Sbjct: 139 AENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDGP-EVDVWSL 197
Query: 563 GIVLLEVLSGQTPIN 577
G++L ++SG P +
Sbjct: 198 GVILYTLVSGSLPFD 212
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 56 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 111
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 112 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 156
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 157 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 216
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
S +D+++ G ++ +L G+ P
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/191 (21%), Positives = 90/191 (47%), Gaps = 24/191 (12%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K+ A ++ ++++++EM H NI+ LLG C DGP +++ YA G+L+++
Sbjct: 76 KDDATEKDLSDLVSEMEMM---KMIGKHKNIINLLGACTQDGP-LYVIVGYASKGNLREY 131
Query: 462 LHG----GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L G+ +T+ + +A ++Y+ + +HR++ +RN+
Sbjct: 132 LRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLA---SQKCIHRDLAARNV 188
Query: 518 FLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-----------SMGIDIFAYGIV 565
+ E ++ +FG+AR +N+ D P W + D++++G++
Sbjct: 189 LVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
Query: 566 LLEVLS-GQTP 575
+ E+ + G +P
Sbjct: 249 MWEIFTLGGSP 259
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 87/212 (41%), Gaps = 35/212 (16%)
Query: 392 GAVYHGRLNG----KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF 447
G VY G+ +G K L + E ++ H NI+ +G D +
Sbjct: 50 GTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTKD--NLA 107
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
+V ++ + SL LH F Q + I A + Y+H +
Sbjct: 108 IVTQWCEGSSLYKHLHVQETKFQMF-----------QLIDIARQTAQGMDYLH---AKNI 153
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS-TNPASW------------- 553
+HR++KS NIFL E ++G+FG+A + + S Q T W
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 554 -SMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
S D+++YGIVL E+++G+ P + +D+
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELPYSHINNRDQ 245
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 33/195 (16%)
Query: 399 LNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHSFLVFEYA 453
L G+ +AIK + + +Q + +HPNIV+L T+ +L+ EYA
Sbjct: 38 LTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETE-KTLYLIMEYA 96
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G + D+L MK + S + + A+QY H VHR++K
Sbjct: 97 SGGEVFDYLVAHGRMKEKEARSKFR------------QIVSAVQYCHQ---KRIVHRDLK 141
Query: 514 SRNIFLDEEFNARVGNFGM-----------ARCVNDDTESPQFYSTNPASWSMGIDIFAY 562
+ N+ LD + N ++ +FG A C +P+ + +D+++
Sbjct: 142 AENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDGP-EVDVWSL 200
Query: 563 GIVLLEVLSGQTPIN 577
G++L ++SG P +
Sbjct: 201 GVILYTLVSGSLPFD 215
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 58 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 113
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 114 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 158
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 159 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 218
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
S +D+++ G ++ +L G+ P
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 32 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEP-I 87
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY G L D+L G + +L Q + + +A + Y+ + +
Sbjct: 88 YIVTEYMSKGCLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAYVERM---N 134
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 135 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI 194
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 195 KSDVWSFGILLTELTTKGRVPYPGMVNR 222
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 392 GAVYHGRLNGKN-LAIKRTEHEVITK----LEMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 22 GEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHE--KLVQLYAV-VSEEPIX 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+V EY GSL D+L G +L Q + + +A + Y+ + +
Sbjct: 79 -IVTEYMSKGSLLDFLKGETGK----------YLRLPQLVDMAAQIASGMAYVERM---N 124
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
YVHR++++ NI + E +V +FG+AR + D+ + + + P W ++
Sbjct: 125 YVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 184
Query: 556 GIDIFAYGIVLLEVLS-GQTP----INR 578
D++++GI+L E+ + G+ P +NR
Sbjct: 185 KSDVWSFGILLTELTTKGRVPYPGMVNR 212
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 89/204 (43%), Gaps = 29/204 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 32 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 87
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 88 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 132
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 133 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGH 192
Query: 554 SMGIDIFAYGIVLLEVLSGQTPIN 577
S +D+++ G ++ +L G+ P
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFE 216
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 79/166 (47%), Gaps = 15/166 (9%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCY 477
E++++ H H NIV LLG C GP ++ EY G L ++L + A
Sbjct: 99 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKSRVLETDPAFAI 156
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-CV 536
T S R + +A Q M + + + +HR++ +RN+ L A++G+FG+AR +
Sbjct: 157 ANSTASTRDLLHFSSQVA-QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIM 215
Query: 537 NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
ND + + P W ++ D+++YGI+L E+ S
Sbjct: 216 NDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 94/209 (44%), Gaps = 50/209 (23%)
Query: 392 GAVYHGRLNGKN-LAIKR------------TEHEVITKLEMQLVQHATHHHPNIVRLLGT 438
G V+ G NG +AIK E +V+ KL H +V+L
Sbjct: 199 GEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKL----------RHEKLVQLYAV 248
Query: 439 CLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY 498
+++ P ++V EY GSL D+L G + +L Q + + +A + Y
Sbjct: 249 -VSEEP-IYIVTEYMSKGSLLDFLKGEMGK----------YLRLPQLVDMAAQIASGMAY 296
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW----- 553
+ + +YVHR++++ NI + E +V +FG+ R + D+ + + + P W
Sbjct: 297 VERM---NYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEA 353
Query: 554 ------SMGIDIFAYGIVLLEVLS-GQTP 575
++ D++++GI+L E+ + G+ P
Sbjct: 354 ALYGRFTIKSDVWSFGILLTELTTKGRVP 382
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A+K + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP-EVDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 114
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 77/160 (48%), Gaps = 34/160 (21%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLH---GGLAMKNQFIASCYCFLT 481
A HPNIV+ + +G ++V +Y + G L ++ G L ++Q L
Sbjct: 78 ANMKHPNIVQYRESFEENG-SLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-------LD 129
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
W ++ICL + HV + +HR+IKS+NIFL ++ ++G+FG+AR +N E
Sbjct: 130 WF--VQICLA-------LKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE 180
Query: 542 ------------SPQFYSTNPASWSMGIDIFAYGIVLLEV 569
SP+ P ++ DI+A G VL E+
Sbjct: 181 LARACIGTPYYLSPEICENKP--YNNKSDIWALGCVLYEL 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A+K + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP-EVDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 38 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 93
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 94 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 138
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 139 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 198
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
S +D+++ G ++ +L G+ P
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A+K + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGM-----------ARCVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG A C +P+ + +D++
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGP-EVDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 34 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 89
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 90 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 134
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
S +D+++ G ++ +L G+ P
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 89/203 (43%), Gaps = 29/203 (14%)
Query: 384 FNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG 443
F S+ V+ G++ K+L +K + E K+ M++ H + H ++V G D
Sbjct: 34 FEISDADTKEVFAGKIVPKSLLLKPHQRE---KMSMEISIHRSLAHQHVVGFHGF-FEDN 89
Query: 444 PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
F+V E + SL + LH + A Y LR + + QY+H
Sbjct: 90 DFVFVVLELCRRRSLLE-LHKRRKALTEPEARYY--------LR---QIVLGCQYLH--- 134
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASW 553
+HR++K N+FL+E+ ++G+FG+A V D E + P
Sbjct: 135 RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGH 194
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
S +D+++ G ++ +L G+ P
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A+K + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 30 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 88
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 89 SGGEVFDYLVAHGWMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 131
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 132 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYD-GPEVDVW 190
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 191 SLGVILYTLVSGSLPFD 207
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 95/226 (42%), Gaps = 43/226 (19%)
Query: 374 IEDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH---- 429
I D+ F S + VY R ++AIK + ++++ A H
Sbjct: 13 IADIELGCGNFGS---VRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDN 69
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P IVRL+G C + LV E A G L +L G K + I S +
Sbjct: 70 PYIVRLIGVCQAEA--LMLVMEMAGGGPLHKFLVG----KREEIPV-------SNVAELL 116
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
V+M ++Y+ ++VHR++ +RN+ L A++ +FG+++ + D +Y+
Sbjct: 117 HQVSMGMKYLEE---KNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADD---SYYTAR 170
Query: 550 -----PASW-----------SMGIDIFAYGIVLLEVLS-GQTPINR 578
P W S D+++YG+ + E LS GQ P +
Sbjct: 171 SAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 114
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 114
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 115 PKRAIEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 114
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 172 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 429 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 474
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 475 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 531
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 532 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 572
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 430 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 475
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 476 VHQVSMGMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 532
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 533 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 573
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 67 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 114
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 115 PKRAIEVIADACQALNFSHQ---NGIIHRDVKPANILISATNAVKVVDFGIARAIADSGN 171
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 172 SVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 373 SIEDLRRATEKFNSSNR-IEGAVYHGR--LNGKNLAIKRTEHEVITKLEM---QLVQHAT 426
S+ D ++ +F + G VY G+ +AI++ + K E+ +++
Sbjct: 15 SVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRE 74
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+ +PNIV L + L G ++V EY GSL D + + Q A C
Sbjct: 75 NKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC---------- 123
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFY 546
R CL AL+++H + +HRNIKS NI L + + ++ +FG + +
Sbjct: 124 RECLQ---ALEFLH---SNQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTM 177
Query: 547 STNP----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P ++ +DI++ GI+ +E++ G+ P
Sbjct: 178 VGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/160 (24%), Positives = 76/160 (47%), Gaps = 30/160 (18%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HP++VRLLG CL+ P LV + +G L +++H +++ L W
Sbjct: 95 ASMDHPHLVRLLGVCLS--PTIQLVTQLMPHGCLLEYVH-----EHKDNIGSQLLLNW-- 145
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTESP 543
C+ +A + Y+ VHR++ +RN+ + + ++ +FG+AR + D+ E
Sbjct: 146 ----CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 198
Query: 544 QFYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
P W M + D+++YG+ + E+++
Sbjct: 199 ADGGKMPIKW-MALECIHYRKFTHQSDVWSYGVTIWELMT 237
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 87 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 132
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 133 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 87 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 132
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 133 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 189
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 190 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A++ + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDGP-EVDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 77 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 122
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 123 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 179
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 180 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 86/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A++ + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEVIETEKT-LYLVMEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 139 LKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDGP-EVDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 85 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 130
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 131 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 187
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 188 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 103/226 (45%), Gaps = 33/226 (14%)
Query: 366 KRLLESYSIEDLRRATEKFNSSNR-IEGAVYHGR--LNGKNLAIKRTEHEVITKLEM--- 419
++L S+ D ++ +F + G VY G+ +AI++ + K E+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN 66
Query: 420 QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF 479
+++ + +PNIV L + L G ++V EY GSL D + + Q A C
Sbjct: 67 EILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--- 122
Query: 480 LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM-ARCVND 538
R CL AL+++H + +HR+IKS NI L + + ++ +FG A+ +
Sbjct: 123 -------RECLQ---ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 539 DTESPQFYST---------NPASWSMGIDIFAYGIVLLEVLSGQTP 575
++ + T ++ +DI++ GI+ +E++ G+ P
Sbjct: 170 QSKRSEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 71 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 117 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTH 173
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 71 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 117 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 173
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 174 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 67 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 112
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 113 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 169
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 170 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/161 (24%), Positives = 76/161 (47%), Gaps = 31/161 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
+P IVR++G C + LV E A+ G L +L +K++ I + +
Sbjct: 65 NPYIVRMIGIC--EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI------------IEL 110
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--SPQFY 546
V+M ++Y+ ++VHR++ +RN+ L + A++ +FG+++ + D Q +
Sbjct: 111 VHQVSMGMKYLEE---SNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH 167
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P W S D++++G+++ E S GQ P
Sbjct: 168 GKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 71/167 (42%), Gaps = 31/167 (18%)
Query: 425 ATHHHPNIVRLLGTCLTD---GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLT 481
A +HP IV + T + GP ++V EY +L+D +H M T
Sbjct: 84 AALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPM------------T 131
Query: 482 WSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
+ + + D AL + H +HR++K NI + +V +FG+AR + D
Sbjct: 132 PKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 188
Query: 542 S----------PQFYSTNPA---SWSMGIDIFAYGIVLLEVLSGQTP 575
S Q+ S A S D+++ G VL EVL+G+ P
Sbjct: 189 SVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 85/197 (43%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIKRTEHEVITKLEMQLVQHATH-----HHPNIVRLLGTCLTDGPHSFLVFEYA 453
L G+ +A+K + + +Q + +HPNIV+L T+ +LV EYA
Sbjct: 38 LTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKT-LYLVMEYA 96
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG + K + R + A+QY H VHR+
Sbjct: 97 SGGEVFDYLVAHGRMKEKEA-----------RAKFR---QIVSAVQYCHQ---KYIVHRD 139
Query: 512 IKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG + C + +P+ + +D++
Sbjct: 140 LKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFCGSPPYAAPELFQGKKYDGP-EVDVW 198
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 199 SLGVILYTLVSGSLPFD 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 89/194 (45%), Gaps = 31/194 (15%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
+Y + K ++R E + K E+Q++Q HP +V L + D F+V +
Sbjct: 42 MYAMKYMNKQKCVERNEVRNVFK-ELQIMQGL--EHPFLVNLWYS-FQDEEDMFMVVDLL 97
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L+ L + K + + +L IC ++ MAL Y+ N +HR++K
Sbjct: 98 LGGDLRYHLQQNVHFKEETV-----------KLFIC-ELVMALDYLQ---NQRIIHRDMK 142
Query: 514 SRNIFLDEEFNARVGNFGMARCVNDDTE-----------SPQFYSTNP-ASWSMGIDIFA 561
NI LDE + + +F +A + +T+ +P+ +S+ A +S +D ++
Sbjct: 143 PDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWS 202
Query: 562 YGIVLLEVLSGQTP 575
G+ E+L G+ P
Sbjct: 203 LGVTAYELLRGRRP 216
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 85/183 (46%), Gaps = 31/183 (16%)
Query: 408 RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HGG 465
R + E + + E ++ + H NIV ++ D + +LV EY + +L +++ HG
Sbjct: 49 REKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCY-YLVMEYIEGPTLSEYIESHGP 107
Query: 466 LAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
L S + ++ ++ L + H + VHR+IK +NI +D
Sbjct: 108 L--------SVDTAINFTNQI---------LDGIKHAHDMRIVHRDIKPQNILIDSNKTL 150
Query: 526 RVGNFGMARCVNDDT--------ESPQFYSTNPASWSMG---IDIFAYGIVLLEVLSGQT 574
++ +FG+A+ +++ + + Q++S A DI++ GIVL E+L G+
Sbjct: 151 KIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEP 210
Query: 575 PIN 577
P N
Sbjct: 211 PFN 213
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 85/197 (43%), Gaps = 36/197 (18%)
Query: 399 LNGKNLAIKRTEHE------VITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEY 452
L G +A+K + V+ K+ ++ HP+I++L T F+V EY
Sbjct: 39 LTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPS-DIFMVMEY 97
Query: 453 AKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
G L D++ +G L K + R+ + + Y H M VHR
Sbjct: 98 VSGGELFDYICKNGRLDEK--------------ESRRLFQQILSGVDYCHRHM---VVHR 140
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVND------DTESPQFYSTNPASWSM----GIDIF 560
++K N+ LD NA++ +FG++ ++D SP + + S + +DI+
Sbjct: 141 DLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIW 200
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L +L G P +
Sbjct: 201 SSGVILYALLCGTLPFD 217
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L AM N
Sbjct: 75 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 130
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 131 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 185 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 366 KRLLESYSIEDLRRATEKFNSSNR-IEGAVYHGR--LNGKNLAIKRTEHEVITKLEM--- 419
++L S+ D ++ +F + G VY G+ +AI++ + K E+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN 66
Query: 420 QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF 479
+++ + +PNIV L + L G ++V EY GSL D + + Q A C
Sbjct: 67 EILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--- 122
Query: 480 LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD 539
R CL AL+++H + +HR+IKS NI L + + ++ +FG + +
Sbjct: 123 -------RECLQ---ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 540 TESPQFYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P ++ +DI++ GI+ +E++ G+ P
Sbjct: 170 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/159 (23%), Positives = 75/159 (47%), Gaps = 28/159 (17%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HP++VRLLG CL+ P LV + +G L +++H +++ L W
Sbjct: 72 ASMDHPHLVRLLGVCLS--PTIQLVTQLMPHGCLLEYVH-----EHKDNIGSQLLLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTESP 543
C+ +A + Y+ VHR++ +RN+ + + ++ +FG+AR + D+ E
Sbjct: 123 ----CVQIAKGMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYN 175
Query: 544 QFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
P W + D+++YG+ + E+++
Sbjct: 176 ADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMT 214
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 366 KRLLESYSIEDLRRATEKFNSSNR-IEGAVYHGR--LNGKNLAIKRTEHEVITKLEM--- 419
++L S+ D ++ +F + G VY G+ +AI++ + K E+
Sbjct: 8 EKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN 67
Query: 420 QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF 479
+++ + +PNIV L + L G ++V EY GSL D + + Q A C
Sbjct: 68 EILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--- 123
Query: 480 LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD 539
R CL AL+++H + +HR+IKS NI L + + ++ +FG + +
Sbjct: 124 -------RECLQ---ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 170
Query: 540 TESPQFYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P ++ +DI++ GI+ +E++ G+ P
Sbjct: 171 QSKRSXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/226 (23%), Positives = 99/226 (43%), Gaps = 33/226 (14%)
Query: 366 KRLLESYSIEDLRRATEKFNSSNR-IEGAVYHGR--LNGKNLAIKRTEHEVITKLEM--- 419
++L S+ D ++ +F + G VY G+ +AI++ + K E+
Sbjct: 7 EKLRSIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIIN 66
Query: 420 QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCF 479
+++ + +PNIV L + L G ++V EY GSL D + + Q A C
Sbjct: 67 EILVMRENKNPNIVNYLDSYLV-GDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVC--- 122
Query: 480 LTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD 539
R CL AL+++H + +HR+IKS NI L + + ++ +FG + +
Sbjct: 123 -------RECLQ---ALEFLH---SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPE 169
Query: 540 TESPQFYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P ++ +DI++ GI+ +E++ G+ P
Sbjct: 170 QSKRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 215
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 5 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 64
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L AM N
Sbjct: 65 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNP 120
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 121 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 174
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 175 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 223
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 398 RLNGKNLAIKRTEHE------VITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
+L G +A+K + V+ K++ ++ HP+I++L ++ F+V E
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY-QVISTPTDFFMVME 91
Query: 452 YAKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
Y G L D++ HG + + R+ + A+ Y H M VH
Sbjct: 92 YVSGGELFDYICKHGRVEE--------------MEARRLFQQILSAVDYCHRHM---VVH 134
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDI 559
R++K N+ LD NA++ +FG++ ++D SP + + S + +DI
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDI 194
Query: 560 FAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIKS 595
++ G++L +L G P + DE L +KI+
Sbjct: 195 WSCGVILYALLCGTLPFD-----DEHVPTLFKKIRG 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 95/216 (43%), Gaps = 41/216 (18%)
Query: 398 RLNGKNLAIKRTEHE------VITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
+L G +A+K + V+ K++ ++ HP+I++L ++ F+V E
Sbjct: 33 QLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLY-QVISTPTDFFMVME 91
Query: 452 YAKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
Y G L D++ HG + + R+ + A+ Y H M VH
Sbjct: 92 YVSGGELFDYICKHGRVEE--------------MEARRLFQQILSAVDYCHRHM---VVH 134
Query: 510 RNIKSRNIFLDEEFNARVGNFGMARCVN------DDTESPQFYSTNPASWSM----GIDI 559
R++K N+ LD NA++ +FG++ ++ D SP + + S + +DI
Sbjct: 135 RDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDI 194
Query: 560 FAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIKS 595
++ G++L +L G P + DE L +KI+
Sbjct: 195 WSCGVILYALLCGTLPFD-----DEHVPTLFKKIRG 225
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 88/193 (45%), Gaps = 34/193 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 173 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 231
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + Q A +CL V AL +H +HR+IKS
Sbjct: 232 GGALTDIVTHTRMNEEQIAA-------------VCLAVLQALSVLHAQ---GVIHRDIKS 275
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 276 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 333
Query: 563 GIVLLEVLSGQTP 575
GI+++E++ G+ P
Sbjct: 334 GIMVIEMVDGEPP 346
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 78/165 (47%), Gaps = 27/165 (16%)
Query: 429 HPNIVRLLGTCLTDG-----PHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWS 483
HP++ +L+G L P ++ + K+G L +L +N F L
Sbjct: 84 HPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPF------NLPLQ 137
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTES 542
+R +D+A ++Y+ + +++HR++ +RN L E+ V +FG++R + + D
Sbjct: 138 TLVRFMVDIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYR 194
Query: 543 PQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
S P W ++ D++A+G+ + E+++ GQTP
Sbjct: 195 QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 84/197 (42%), Gaps = 37/197 (18%)
Query: 399 LNGKNLAIK-----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
L GK +A+K + + KL ++ +HPNIV+L T+ +LV EYA
Sbjct: 37 LTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEVIETEKT-LYLVXEYA 95
Query: 454 KNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G + D+L HG K + R + A+QY H VHR+
Sbjct: 96 SGGEVFDYLVAHGRXKEKEA-----------RAKFR---QIVSAVQYCHQKF---IVHRD 138
Query: 512 IKSRNIFLDEEFNARVGNFGM-----------ARCVNDDTESPQFYSTNPASWSMGIDIF 560
+K+ N+ LD + N ++ +FG A C +P+ + +D++
Sbjct: 139 LKAENLLLDADXNIKIADFGFSNEFTFGNKLDAFCGAPPYAAPELFQGKKYDGPE-VDVW 197
Query: 561 AYGIVLLEVLSGQTPIN 577
+ G++L ++SG P +
Sbjct: 198 SLGVILYTLVSGSLPFD 214
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 79/165 (47%), Gaps = 28/165 (16%)
Query: 429 HPNIVRLLGTCL---TDG-PHSFLVFEYAKNGSLKDWL-HGGLAMKNQFIASCYCFLTWS 483
HPN++RLLG C+ + G P ++ + K G L +L + L + I
Sbjct: 95 HPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIP-------LQ 147
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTES 542
L+ +D+A+ ++Y+ N +++HR++ +RN L ++ V +FG+++ + + D
Sbjct: 148 TLLKFMVDIALGMEYLS---NRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYR 204
Query: 543 PQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+ P W + D++A+G+ + E+ + G TP
Sbjct: 205 QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTP 249
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 53 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 111
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + Q A +CL V AL +H +HR+IKS
Sbjct: 112 GGALTDIVTHTRMNEEQIAA-------------VCLAVLQALSVLH---AQGVIHRDIKS 155
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 156 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 213
Query: 563 GIVLLEVLSGQTP-INRP 579
GI+++E++ G+ P N P
Sbjct: 214 GIMVIEMVDGEPPYFNEP 231
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 51 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 109
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + Q A +CL V AL +H +HR+IKS
Sbjct: 110 GGALTDIVTHTRMNEEQIAA-------------VCLAVLQALSVLH---AQGVIHRDIKS 153
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 154 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 211
Query: 563 GIVLLEVLSGQTP-INRP 579
GI+++E++ G+ P N P
Sbjct: 212 GIMVIEMVDGEPPYFNEP 229
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 15 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 74
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 75 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 130
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 131 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 184
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 185 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 99/229 (43%), Gaps = 41/229 (17%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 69 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 125 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 533 ARCVND-DTESPQFYSTNPASWSM------GI-----DIFAYGIVLLEV 569
R + + D P W G+ D++++G+VL E+
Sbjct: 179 TRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/165 (21%), Positives = 76/165 (46%), Gaps = 32/165 (19%)
Query: 426 THHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL---HGGLAMKNQFIASCYCFLTW 482
T H +VRL + P +++ E+ GSL D+L GG + + I
Sbjct: 63 TLQHDKLVRLYAVVTKEEP-IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFS------ 115
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES 542
A + M ++ +Y+HR++++ N+ + E ++ +FG+AR + D+ +
Sbjct: 116 ----------AQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 165
Query: 543 PQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+ + P W ++ +++++GI+L E+++ G+ P
Sbjct: 166 AREGAKFPIKWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/235 (22%), Positives = 100/235 (42%), Gaps = 59/235 (25%)
Query: 392 GAVYHGR--LNGKNLAIKRTEH--EVITKLEMQLVQHATHHHPNIVRLLG---------- 437
G V R L+ + AIK+ H E ++ + +++ A+ +H +VR
Sbjct: 20 GQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 438 --TCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
T + F+ EY +NG+L D +H + + + R+ + A
Sbjct: 80 PMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQR-----------DEYWRLFRQILEA 128
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-PAS-- 552
L Y+H + +HR++K NIF+DE N ++G+FG+A+ V+ + + S N P S
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 553 ----------------------WSMGIDIFAYGIVLLEVL----SGQTPINRPRK 581
++ ID+++ GI+ E++ +G +N +K
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 42 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 100
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + Q A +CL V AL +H +HR+IKS
Sbjct: 101 GGALTDIVTHTRMNEEQIAA-------------VCLAVLQALSVLH---AQGVIHRDIKS 144
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 145 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 202
Query: 563 GIVLLEVLSGQTP-INRP 579
GI+++E++ G+ P N P
Sbjct: 203 GIMVIEMVDGEPPYFNEP 220
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 91/205 (44%), Gaps = 37/205 (18%)
Query: 392 GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQLVQHAT-------HHHPNIVRLLG 437
G VY G G +AIK + ++ + A+ HH +VRLLG
Sbjct: 24 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH---VVRLLG 80
Query: 438 TCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
++ G + ++ E G LK +L M+N + + S+ +++ ++A +
Sbjct: 81 V-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAGEIADGM 136
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASWSM 555
Y++ +VHR++ +RN + E+F ++G+FGM R + + D P W
Sbjct: 137 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMS 193
Query: 556 ------GI-----DIFAYGIVLLEV 569
G+ D++++G+VL E+
Sbjct: 194 PESLKDGVFTTYSDVWSFGVVLWEI 218
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 79/170 (46%), Gaps = 21/170 (12%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG----GLAMKNQFI 473
E++++ H H NIV LLG C GP ++ EY G L ++L GL
Sbjct: 99 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKRPPGLEYSYNPS 156
Query: 474 ASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
+ L+ L VA + ++ + + +HR++ +RN+ L A++G+FG+A
Sbjct: 157 HNPEEQLSSRDLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 213
Query: 534 R-CVNDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
R +ND + + P W ++ D+++YGI+L E+ S
Sbjct: 214 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L T T+ FLVF+ K G L D+L + + + + +R
Sbjct: 83 HPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEK---------ETRKIMRA 132
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
L+V AL H +N VHR++K NI LD++ N ++ +FG + C D E
Sbjct: 133 LLEVICAL----HKLN--IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLRSVCG 185
Query: 542 SPQFYSTNPASWSMG---------IDIFAYGIVLLEVLSGQTPI 576
+P + + SM +D+++ G+++ +L+G P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 68 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 124 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 178 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 46 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 104
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + Q A +CL V AL +H +HR+IKS
Sbjct: 105 GGALTDIVTHTRMNEEQIAA-------------VCLAVLQALSVLH---AQGVIHRDIKS 148
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 149 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 206
Query: 563 GIVLLEVLSGQTP-INRP 579
GI+++E++ G+ P N P
Sbjct: 207 GIMVIEMVDGEPPYFNEP 224
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L T T+ FLVF+ K G L D+L + + + + +R
Sbjct: 70 HPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEK---------ETRKIMRA 119
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
L+V AL H +N VHR++K NI LD++ N ++ +FG + C D E
Sbjct: 120 LLEVICAL----HKLN--IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCG 172
Query: 542 SPQFYSTNPASWSMG---------IDIFAYGIVLLEVLSGQTPI 576
+P + + SM +D+++ G+++ +L+G P
Sbjct: 173 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 77/164 (46%), Gaps = 33/164 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L T T+ FLVF+ K G L D+L + + + + +R
Sbjct: 83 HPNIIQLKDTYETN-TFFFLVFDLMKKGELFDYLTEKVTLSEK---------ETRKIMRA 132
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
L+V AL H +N VHR++K NI LD++ N ++ +FG + C D E
Sbjct: 133 LLEVICAL----HKLN--IVHRDLKPENILLDDDMNIKLTDFGFS-CQLDPGEKLREVCG 185
Query: 542 SPQFYSTNPASWSMG---------IDIFAYGIVLLEVLSGQTPI 576
+P + + SM +D+++ G+++ +L+G P
Sbjct: 186 TPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 8 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 67
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 68 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 123
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 124 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 177
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 178 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 226
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 80 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 126
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 90/198 (45%), Gaps = 35/198 (17%)
Query: 398 RLNGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
R +GK +A+K+ + + E+ ++V + H N+V + + L G ++V E+ +
Sbjct: 96 RSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLV-GDELWVVMEFLE 154
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
G+L D + + + Q +CL V AL +H +HR+IKS
Sbjct: 155 GGALTDIV-------------THTRMNEEQIAAVCLAVLQALSVLH---AQGVIHRDIKS 198
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE------------SPQFYSTNPASWSMGIDIFAY 562
+I L + ++ +FG V+ + +P+ S P + +DI++
Sbjct: 199 DSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLP--YGPEVDIWSL 256
Query: 563 GIVLLEVLSGQTP-INRP 579
GI+++E++ G+ P N P
Sbjct: 257 GIMVIEMVDGEPPYFNEP 274
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 9 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 68
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 69 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 124
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 125 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 178
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 179 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 227
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 45/209 (21%)
Query: 392 GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQLVQHAT-------HHHPNIVRLLG 437
G VY G G +AIK + ++ + A+ HH +VRLLG
Sbjct: 30 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH---VVRLLG 86
Query: 438 TCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
++ G + ++ E G LK +L M+N + + S+ +++ ++A +
Sbjct: 87 V-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAGEIADGM 142
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS--------- 547
Y++ +VHR++ +RN + E+F ++G+FGM R D +Y
Sbjct: 143 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 195
Query: 548 --TNPASWSMGI-----DIFAYGIVLLEV 569
+P S G+ D++++G+VL E+
Sbjct: 196 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 92/209 (44%), Gaps = 45/209 (21%)
Query: 392 GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQLVQHAT-------HHHPNIVRLLG 437
G VY G G +AIK + ++ + A+ HH +VRLLG
Sbjct: 26 GMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHH---VVRLLG 82
Query: 438 TCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
++ G + ++ E G LK +L M+N + + S+ +++ ++A +
Sbjct: 83 V-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSL---SKMIQMAGEIADGM 138
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS--------- 547
Y++ +VHR++ +RN + E+F ++G+FGM R D +Y
Sbjct: 139 AYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 191
Query: 548 --TNPASWSMGI-----DIFAYGIVLLEV 569
+P S G+ D++++G+VL E+
Sbjct: 192 RWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 397 GRLNGKNLAIKRTEH-----EVITKLEMQLVQHATHHHPNIVRLLGTCLTDG-PHSFLVF 450
G G +A+K+ +H + + E+Q+++ H IV+ G G P LV
Sbjct: 32 GDNTGALVAVKQLQHSGPDQQRDFQREIQILK--ALHSDFIVKYRGVSYGPGRPELRLVM 89
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVM 503
EY +G L+D+L QR R LD + L Y M ++
Sbjct: 90 EYLPSGCLRDFL---------------------QRHRARLDASRLLLYSSQICKGMEYLG 128
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR---------CVNDDTESPQFYSTNPASWS 554
+ VHR++ +RNI ++ E + ++ +FG+A+ V + +SP F+ P S S
Sbjct: 129 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYA-PESLS 187
Query: 555 MGI-----DIFAYGIVLLEVLS 571
I D++++G+VL E+ +
Sbjct: 188 DNIFSRQSDVWSFGVVLYELFT 209
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 61 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 120
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 121 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 174
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 175 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 227
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 228 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 397 GRLNGKNLAIKRTEH-----EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVF 450
G G +A+K+ +H + + E+Q+++ H IV+ G G S LV
Sbjct: 35 GDNTGALVAVKQLQHSGPDQQRDFQREIQILK--ALHSDFIVKYRGVSYGPGRQSLRLVM 92
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVM 503
EY +G L+D+L QR R LD + L Y M ++
Sbjct: 93 EYLPSGCLRDFL---------------------QRHRARLDASRLLLYSSQICKGMEYLG 131
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR---------CVNDDTESPQFYSTNPASWS 554
+ VHR++ +RNI ++ E + ++ +FG+A+ V + +SP F+ P S S
Sbjct: 132 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 190
Query: 555 MGI-----DIFAYGIVLLEVLS 571
I D++++G+VL E+ +
Sbjct: 191 DNIFSRQSDVWSFGVVLYELFT 212
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 70 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 397 GRLNGKNLAIKRTEH-----EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVF 450
G G +A+K+ +H + + E+Q+++ H IV+ G G S LV
Sbjct: 36 GDNTGALVAVKQLQHSGPDQQRDFQREIQILK--ALHSDFIVKYRGVSYGPGRQSLRLVM 93
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVM 503
EY +G L+D+L QR R LD + L Y M ++
Sbjct: 94 EYLPSGCLRDFL---------------------QRHRARLDASRLLLYSSQICKGMEYLG 132
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR---------CVNDDTESPQFYSTNPASWS 554
+ VHR++ +RNI ++ E + ++ +FG+A+ V + +SP F+ P S S
Sbjct: 133 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 191
Query: 555 MGI-----DIFAYGIVLLEVLS 571
I D++++G+VL E+ +
Sbjct: 192 DNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL----HGGLAMKNQFI 473
E++++ H H NIV LLG C GP ++ EY G L ++L L ++
Sbjct: 99 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 156
Query: 474 ASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
L +S ++ Q M + + + +HR++ +RN+ L A++G+FG+A
Sbjct: 157 LELRDLLHFSSQVA---------QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 207
Query: 534 R-CVNDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
R +ND + + P W ++ D+++YGI+L E+ S
Sbjct: 208 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 51/202 (25%)
Query: 397 GRLNGKNLAIKRTEH-----EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF-LVF 450
G G +A+K+ +H + + E+Q+++ H IV+ G G S LV
Sbjct: 48 GDNTGALVAVKQLQHSGPDQQRDFQREIQILK--ALHSDFIVKYRGVSYGPGRQSLRLVM 105
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY-------MHHVM 503
EY +G L+D+L QR R LD + L Y M ++
Sbjct: 106 EYLPSGCLRDFL---------------------QRHRARLDASRLLLYSSQICKGMEYLG 144
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR---------CVNDDTESPQFYSTNPASWS 554
+ VHR++ +RNI ++ E + ++ +FG+A+ V + +SP F+ P S S
Sbjct: 145 SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLS 203
Query: 555 MGI-----DIFAYGIVLLEVLS 571
I D++++G+VL E+ +
Sbjct: 204 DNIFSRQSDVWSFGVVLYELFT 225
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 79/170 (46%), Gaps = 27/170 (15%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL----HGGLAMKNQFI 473
E++++ H H NIV LLG C GP ++ EY G L ++L L ++
Sbjct: 91 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKAEADLDKEDGRP 148
Query: 474 ASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
L +S ++ Q M + + + +HR++ +RN+ L A++G+FG+A
Sbjct: 149 LELRDLLHFSSQVA---------QGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLA 199
Query: 534 R-CVNDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
R +ND + + P W ++ D+++YGI+L E+ S
Sbjct: 200 RDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 104 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 157
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 51 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 110
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 111 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 164
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 165 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 217
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 218 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 94/201 (46%), Gaps = 34/201 (16%)
Query: 392 GAVYHGRLNGK-NLAIKRTEHEVITKL----EMQLVQHATHHHPNIVRLLGTCLTDGPHS 446
G V+ G NG +AIK + ++ E Q+++ H +V+L +++ P
Sbjct: 23 GEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKLKHD--KLVQLYAV-VSEEP-I 78
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++V EY GSL D+L G L + + VA + Y+ + +
Sbjct: 79 YIVTEYMNKGSLLDFLKDGEGRA----------LKLPNLVDMAAQVAAGMAYIERM---N 125
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SM 555
Y+HR+++S NI + ++ +FG+AR + D+ + + + P W ++
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI 185
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D++++GI+L E+++ G+ P
Sbjct: 186 KSDVWSFGILLTELVTKGRVP 206
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 80 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 126
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 127 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 36 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 95
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 96 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 149
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 150 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 202
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 203 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 2 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 61
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 62 FLNEASVMKEFNCHH---VVRLLGV-VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 117
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 118 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGM 171
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 172 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 220
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 44 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 103
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 104 QSLPR-FILMELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 157
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 158 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 210
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 211 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 105 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 158
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 62 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 121
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 122 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 175
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 176 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVK 228
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 229 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L C D + YAKNG L ++ F +C F T
Sbjct: 96 HPFFVKLY-FCFQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 143
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 144 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 199
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 200 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 240
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 405 AIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG 464
A + V TK+E ++ A +HP +V+L T+G +L+ ++ + G L
Sbjct: 67 ATLKVRDRVRTKMERDIL--ADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDL----FT 119
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
L+ + F F ++A+ L ++H + ++R++K NI LDEE +
Sbjct: 120 RLSKEVMFTEEDVKF--------YLAELALGLDHLHSL---GIIYRDLKPENILLDEEGH 168
Query: 525 ARVGNFGMAR-CVNDDTESPQFYST---------NPASWSMGIDIFAYGIVLLEVLSGQT 574
++ +FG+++ ++ + ++ F T N S D ++YG+++ E+L+G
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 575 PINRPRKKDEGSVWLSEKI 593
P +K+ ++ L K+
Sbjct: 229 PFQGKDRKETMTLILKAKL 247
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 85 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 144
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 145 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 198
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 199 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRAGYYRKGGCAMLPVK 251
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 252 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 71 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 130
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 131 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 184
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 185 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 237
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 238 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 119 QSLPR-FILMELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 172
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 74 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 120
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 74 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 120
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 121 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 70 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVW 588
SP+ + A S D++A G ++ ++++G P R +EG ++
Sbjct: 195 VGTAQYVSPELLTEKSAXKSS--DLWALGCIIYQLVAGLPPF---RAGNEGLIF 243
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 35/157 (22%)
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
++ + + +LKDW++ +++++ C L I + +A A++++H +
Sbjct: 137 YIQMQLCRKENLKDWMNRRCSLEDREHGVC---------LHIFIQIAEAVEFLH---SKG 184
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPA--------------- 551
+HR++K NIF + +VG+FG+ ++ D E + PA
Sbjct: 185 LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQVGTKLYMS 244
Query: 552 -------SWSMGIDIFAYGIVLLEVL-SGQTPINRPR 580
++S +DIF+ G++L E+L S T + R R
Sbjct: 245 PEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVR 281
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 71/161 (44%), Gaps = 30/161 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H N++RL G LT P +V E A GSL D L + F+ R
Sbjct: 70 HRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLR---KHQGHFLLGTLS--------RY 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV--NDDTESPQFY 546
+ VA + Y+ + ++HR++ +RN+ L ++G+FG+ R + NDD Q +
Sbjct: 117 AVQVAEGMGYLE---SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 547 STNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
P +W S D + +G+ L E+ + GQ P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSL 118
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 119 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 172
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 100/233 (42%), Gaps = 49/233 (21%)
Query: 372 YSIEDLRRATEKFNSSNRIE----GAVYHGRLNG-------KNLAIKRTEHEVITKLEMQ 420
Y ++ A EK S + G VY G G +AIK + ++
Sbjct: 37 YVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIE 96
Query: 421 LVQHAT-------HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG-GLAMKNQF 472
+ A+ HH +VRLLG ++ G + ++ E G LK +L M+N
Sbjct: 97 FLNEASVMKEFNCHH---VVRLLG-VVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNP 152
Query: 473 IASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM 532
+ + S+ +++ ++A + Y++ +VHR++ +RN + E+F ++G+FGM
Sbjct: 153 VLAPPSL---SKMIQMAGEIADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGM 206
Query: 533 ARCVNDDTESPQFYS-----------TNPASWSMGI-----DIFAYGIVLLEV 569
R D +Y +P S G+ D++++G+VL E+
Sbjct: 207 TR----DIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 255
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 87/206 (42%), Gaps = 39/206 (18%)
Query: 392 GAVYHGRLNGKNLAIK------------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTC 439
G ++ GR G ++ +K R +E +L + HPN++ +LG C
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRI-------FSHPNVLPVLGAC 76
Query: 440 LTD-GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY 498
+ PH L+ + GSL + LH G F+ SQ ++ LD+A + +
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHEG----TNFVVDQ------SQAVKFALDMARGMAF 126
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM-------ARCVNDDTESPQFYSTNPA 551
+H + P + SR++ +DE+ AR+ + R +P+ P
Sbjct: 127 LH-TLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAWVAPEALQKKPE 185
Query: 552 SWS-MGIDIFAYGIVLLEVLSGQTPI 576
+ D++++ ++L E+++ + P
Sbjct: 186 DTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 79/174 (45%), Gaps = 35/174 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVW 588
SP+ + A S D++A G ++ ++++G P R +EG ++
Sbjct: 195 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPF---RAGNEGLIF 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 59 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 118
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 119 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 172
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMAR D +Y
Sbjct: 173 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 225
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 226 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 87/210 (41%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSL 104
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 105 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 158
Query: 501 HVMNPSYVHRNIKSRNIFL---DEEFNARVGNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L A++G+FGMAR D +Y
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAMLPVK 211
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 74/163 (45%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGCLLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + AS S D++A G ++ ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSASKSS--DLWALGCIIYQLVAGLPPFR 235
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
V+ G++ K++ +K + E K+ ++ H + +P++V G D ++V E
Sbjct: 69 VFAGKVVPKSMLLKPHQKE---KMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLEIC 124
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
+ SL + L + + + Q ++ +QY+H N +HR++K
Sbjct: 125 RRRSLLE-----LHKRRKAVTEPEARYFMRQTIQ-------GVQYLH---NNRVIHRDLK 169
Query: 514 SRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWSMGIDIFAYG 563
N+FL+++ + ++G+FG+A + D E + P S +DI++ G
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 564 IVLLEVLSGQTPIN 577
+L +L G+ P
Sbjct: 230 CILYTLLVGKPPFE 243
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 31/168 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGG--------LAMKNQFI---ASCY 477
H NIV LLG C GP +L+FEY G L ++L + +NQ
Sbjct: 108 HENIVNLLGACTLSGP-IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDL 166
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
LT+ L VA ++++ S VHR++ +RN+ + ++ +FG+AR +
Sbjct: 167 NVLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIM 223
Query: 538 DDTE--------------SPQFYSTNPASWSMGIDIFAYGIVLLEVLS 571
D+ +P+ S +++ D+++YGI+L E+ S
Sbjct: 224 SDSNYVVRGNARLPVKWMAPE--SLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
V+ G++ K++ +K + E K+ ++ H + +P++V G D ++V E
Sbjct: 69 VFAGKVVPKSMLLKPHQKE---KMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLEIC 124
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
+ SL + L + + + Q ++ +QY+H N +HR++K
Sbjct: 125 RRRSLLE-----LHKRRKAVTEPEARYFMRQTIQ-------GVQYLH---NNRVIHRDLK 169
Query: 514 SRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWSMGIDIFAYG 563
N+FL+++ + ++G+FG+A + D E + P S +DI++ G
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 564 IVLLEVLSGQTPIN 577
+L +L G+ P
Sbjct: 230 CILYTLLVGKPPFE 243
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/218 (25%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 387 SNRIEGAVYHGR--LNGKNLAIK----RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCL 440
N G VY GR G+ AIK + E K E+ +++ +HH NI G +
Sbjct: 33 GNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHR-NIATYYGAFI 91
Query: 441 TDGP-----HSFLVFEYAKNGSLKDWLHG--GLAMKNQFIASCYCFLTWSQRLRICLDVA 493
P +LV E+ GS+ D + G +K ++IA IC ++
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY------------ICREIL 139
Query: 494 MALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA----RCV---NDDTESPQFY 546
L ++H +HR+IK +N+ L E ++ +FG++ R V N +P +
Sbjct: 140 RGLSHLHQ---HKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWM 196
Query: 547 S-------TNP-ASWSMGIDIFAYGIVLLEVLSGQTPI 576
+ NP A++ D+++ GI +E+ G P+
Sbjct: 197 APEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
V+ G++ K++ +K + E K+ ++ H + +P++V G D ++V E
Sbjct: 69 VFAGKVVPKSMLLKPHQKE---KMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLEIC 124
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
+ SL + L + + + Q ++ +QY+H N +HR++K
Sbjct: 125 RRRSLLE-----LHKRRKAVTEPEARYFMRQTIQ-------GVQYLH---NNRVIHRDLK 169
Query: 514 SRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWSMGIDIFAYG 563
N+FL+++ + ++G+FG+A + D E + P S +DI++ G
Sbjct: 170 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG 229
Query: 564 IVLLEVLSGQTPIN 577
+L +L G+ P
Sbjct: 230 CILYTLLVGKPPFE 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 94/199 (47%), Gaps = 28/199 (14%)
Query: 405 AIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG 464
A + V TK+E ++ +HP IV+L T+G +L+ ++ + G L
Sbjct: 63 ATLKVRDRVRTKMERDILVEV--NHPFIVKLHYAFQTEGK-LYLILDFLRGGDL----FT 115
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
L+ + F F ++A+AL ++H + ++R++K NI LDEE +
Sbjct: 116 RLSKEVMFTEEDVKF--------YLAELALALDHLHSL---GIIYRDLKPENILLDEEGH 164
Query: 525 ARVGNFGMAR-CVNDDTESPQFYST---------NPASWSMGIDIFAYGIVLLEVLSGQT 574
++ +FG+++ ++ + ++ F T N + D +++G+++ E+L+G
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 575 PINRPRKKDEGSVWLSEKI 593
P +K+ ++ L K+
Sbjct: 225 PFQGKDRKETMTMILKAKL 243
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 29/194 (14%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
V+ G++ K++ +K + E K+ ++ H + +P++V G D ++V E
Sbjct: 53 VFAGKVVPKSMLLKPHQKE---KMSTEIAIHKSLDNPHVVGFHGF-FEDDDFVYVVLEIC 108
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
+ SL + L + + + Q ++ +QY+H N +HR++K
Sbjct: 109 RRRSLLE-----LHKRRKAVTEPEARYFMRQTIQ-------GVQYLH---NNRVIHRDLK 153
Query: 514 SRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWSMGIDIFAYG 563
N+FL+++ + ++G+FG+A + D E + P S +DI++ G
Sbjct: 154 LGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLG 213
Query: 564 IVLLEVLSGQTPIN 577
+L +L G+ P
Sbjct: 214 CILYTLLVGKPPFE 227
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 86/210 (40%), Gaps = 43/210 (20%)
Query: 392 GAVYHGRLNGK-------NLAIKRTEHEVITKLEMQLVQHA----THHHPNIVRLLGTCL 440
G VY G+++G +A+K + E+ + A +H NIVR +G L
Sbjct: 45 GEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSL 104
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
P F++ E G LK +L +Q + L L + D+A QY+
Sbjct: 105 QSLPR-FILLELMAGGDLKSFLRETRPRPSQPSS-----LAMLDLLHVARDIACGCQYLE 158
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARV---GNFGMARCVNDDTESPQFYSTN-------- 549
++HR+I +RN L RV G+FGMA+ D +Y
Sbjct: 159 EN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----DIYRASYYRKGGCAMLPVK 211
Query: 550 ---PASWSMGI-----DIFAYGIVLLEVLS 571
P ++ GI D +++G++L E+ S
Sbjct: 212 WMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 88/189 (46%), Gaps = 30/189 (15%)
Query: 400 NGKNLAIKRTEHEVITKLEM---QLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNG 456
+G+ +A+K + + E+ ++V + H N+V + + L G +++ E+ + G
Sbjct: 69 SGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLV-GEELWVLMEFLQGG 127
Query: 457 SLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRN 516
+L D + + + + IA+ +C V AL Y+H +HR+IKS +
Sbjct: 128 ALTD-IVSQVRLNEEQIAT------------VCEAVLQALAYLH---AQGVIHRDIKSDS 171
Query: 517 IFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWSMGIDIFAYGIVL 566
I L + ++ +FG ++ D + P + ++ +DI++ GI++
Sbjct: 172 ILLTLDGRVKLSDFGFCAQISKDVPKRKXLVGTPYWMAPEVISRSLYATEVDIWSLGIMV 231
Query: 567 LEVLSGQTP 575
+E++ G+ P
Sbjct: 232 IEMVDGEPP 240
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 405 AIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG 464
A + V TK+E ++ H P IV+L T+G +L+ ++ + G L L
Sbjct: 64 ATLKVRDRVRTKMERDILVEVNH--PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL-- 118
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
S T ++A+AL ++H + ++R++K NI LDEE +
Sbjct: 119 ----------SKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGH 165
Query: 525 ARVGNFGMAR-CVNDDTESPQFYST---------NPASWSMGIDIFAYGIVLLEVLSGQT 574
++ +FG+++ ++ + ++ F T N + D +++G+++ E+L+G
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
Query: 575 PINRPRKKDEGSVWLSEKI 593
P +K+ ++ L K+
Sbjct: 226 PFQGKDRKETMTMILKAKL 244
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 91/199 (45%), Gaps = 28/199 (14%)
Query: 405 AIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG 464
A + V TK+E ++ H P IV+L T+G +L+ ++ + G L L
Sbjct: 63 ATLKVRDRVRTKMERDILVEVNH--PFIVKLHYAFQTEGK-LYLILDFLRGGDLFTRL-- 117
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
S T ++A+AL ++H + ++R++K NI LDEE +
Sbjct: 118 ----------SKEVMFTEEDVKFYLAELALALDHLHSL---GIIYRDLKPENILLDEEGH 164
Query: 525 ARVGNFGMAR-CVNDDTESPQFYST---------NPASWSMGIDIFAYGIVLLEVLSGQT 574
++ +FG+++ ++ + ++ F T N + D +++G+++ E+L+G
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 575 PINRPRKKDEGSVWLSEKI 593
P +K+ ++ L K+
Sbjct: 225 PFQGKDRKETMTMILKAKL 243
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 22/174 (12%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLH-GGLAMKNQFIASC 476
E++++ H H NIV LLG C GP ++ EY G L ++L AM +A
Sbjct: 84 ELKIMSHLGQHE-NIVNLLGACTHGGP-VLVITEYCCYGDLLNFLRRKAEAMLGPSLAPG 141
Query: 477 YCFLTWSQR------LRICLDVAMAL-QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGN 529
+ LR L + + Q M + + + +HR++ +RN+ L A++G+
Sbjct: 142 QDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGD 201
Query: 530 FGMAR-CVNDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVLS 571
FG+AR +ND + + P W ++ D+++YGI+L E+ S
Sbjct: 202 FGLARDIMNDSNYIVKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 89 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 136
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 137 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 69 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 116
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 117 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 172
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 173 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 213
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 66 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 113
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 114 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 169
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 170 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 68 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 115
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 116 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 171
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 172 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 212
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 89 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 136
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 137 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAF 192
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 233
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 92 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 139
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 140 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 195
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 236
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 235
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 89 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 136
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 137 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 67 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 114
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 115 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 170
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 171 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 211
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 89 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 136
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 137 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 193 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 233
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 235
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/235 (22%), Positives = 99/235 (42%), Gaps = 59/235 (25%)
Query: 392 GAVYHGR--LNGKNLAIKRTEH--EVITKLEMQLVQHATHHHPNIVRLLG---------- 437
G V R L+ + AIK+ H E ++ + +++ A+ +H +VR
Sbjct: 20 GQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 438 --TCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
T + F+ EY +N +L D +H + + + R+ + A
Sbjct: 80 PMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQR-----------DEYWRLFRQILEA 128
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-PAS-- 552
L Y+H + +HR++K NIF+DE N ++G+FG+A+ V+ + + S N P S
Sbjct: 129 LSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSD 185
Query: 553 ----------------------WSMGIDIFAYGIVLLEVL----SGQTPINRPRK 581
++ ID+++ GI+ E++ +G +N +K
Sbjct: 186 NLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNILKK 240
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 91 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 139 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 194
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 195 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 235
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 92 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 139
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 140 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 195
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 196 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 236
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 94 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIR----KIGSFDETCTRFYT------- 141
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 142 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 197
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 198 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 238
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 21/146 (14%)
Query: 445 HSFLVFEYAKN-GSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
H F F+ +N + ++L+GG M + I SC+ F S+ ++ + LQ++H
Sbjct: 82 HMFCTFQTKENLFFVMEYLNGGDLMYH--IQSCHKF-DLSRATFYAAEIILGLQFLH--- 135
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPA 551
+ V+R++K NI LD++ + ++ +FGM + C D +P+
Sbjct: 136 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPDYIAPEILLGQ-- 193
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTPIN 577
++ +D +++G++L E+L GQ+P +
Sbjct: 194 KYNHSVDWWSFGVLLYEMLIGQSPFH 219
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 21/146 (14%)
Query: 445 HSFLVFEYAKN-GSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
H F F+ +N + ++L+GG M + I SC+ F S+ ++ + LQ++H
Sbjct: 83 HMFCTFQTKENLFFVMEYLNGGDLMYH--IQSCHKF-DLSRATFYAAEIILGLQFLH--- 136
Query: 504 NPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPA 551
+ V+R++K NI LD++ + ++ +FGM + C D +P+
Sbjct: 137 SKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPDYIAPEILLGQ-- 194
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTPIN 577
++ +D +++G++L E+L GQ+P +
Sbjct: 195 KYNHSVDWWSFGVLLYEMLIGQSPFH 220
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 69/156 (44%), Gaps = 27/156 (17%)
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P I R G+ L +++ EY GS D L G ++ +IA+ I
Sbjct: 77 PYITRYFGSYLK-STKLWIIMEYLGGGSALDLLKPG-PLEETYIAT------------IL 122
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
++ L Y+H + +HR+IK+ N+ L E+ + ++ +FG+A + D +
Sbjct: 123 REILKGLDYLH---SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFVGT 179
Query: 550 P----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P +++ DI++ GI +E+ G+ P
Sbjct: 180 PFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP 215
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 73 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 120
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 121 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 176
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 177 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 217
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 31/178 (17%)
Query: 392 GAVYHGR--LNGKNLAIKRTEH--EVITKLEMQLVQHATHHHPNIVRLLG---------- 437
G V R L+ + AIK+ H E ++ + ++ A+ +H +VR
Sbjct: 20 GQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWLERRNFVK 79
Query: 438 --TCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
T + F+ EY +N +L D +H + + + R+ + A
Sbjct: 80 PXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQR-----------DEYWRLFRQILEA 128
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-PAS 552
L Y+H + +HRN+K NIF+DE N ++G+FG+A+ V+ + + S N P S
Sbjct: 129 LSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGS 183
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 81/191 (42%), Gaps = 35/191 (18%)
Query: 405 AIKRTEHEVITK---LEMQLVQH---ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSL 458
AIK + +V+ + +E +V+ A P + L +C + V EY G L
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDL 107
Query: 459 KDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIF 518
+ K Q + ++++ L ++H ++R++K N+
Sbjct: 108 MYHIQQVGKFKE------------PQAVFYAAEISIGLFFLH---KRGIIYRDLKLDNVM 152
Query: 519 LDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDIFAYGIVL 566
LD E + ++ +FGM + C D +P+ + P + +D +AYG++L
Sbjct: 153 LDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP--YGKSVDWWAYGVLL 210
Query: 567 LEVLSGQTPIN 577
E+L+GQ P +
Sbjct: 211 YEMLAGQPPFD 221
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCY 477
E +++ T HH +VRLLG ++ G + +V E +G LK +L
Sbjct: 71 EASVMKGFTCHH--VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 127
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
T + +++ ++A + Y++ +VHRN+ +RN + +F ++G+FGM R
Sbjct: 128 P--TLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR--- 179
Query: 538 DDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS 571
D +Y P W + D++++G+VL E+ S
Sbjct: 180 -DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 90/210 (42%), Gaps = 41/210 (19%)
Query: 392 GAVYHGRL--NGKNL----AIKRTEHEVITKLEMQLVQHATHH----HPNIVRLLGTCLT 441
G VY G +G+N+ AIK K +++ A P + RLLG CLT
Sbjct: 31 GTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSRLLGICLT 90
Query: 442 DGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHH 501
LV + G L D + +N+ L W C+ +A + Y+
Sbjct: 91 STVQ--LVTQLMPYGCLLDHVR-----ENRGRLGSQDLLNW------CMQIAKGMSYLED 137
Query: 502 VMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN-DDTESPQFYSTNPASWSMGI--- 557
V VHR++ +RN+ + + ++ +FG+AR ++ D+TE P W M +
Sbjct: 138 V---RLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW-MALESI 193
Query: 558 ---------DIFAYGIVLLEVLS-GQTPIN 577
D+++YG+ + E+++ G P +
Sbjct: 194 LRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCY 477
E +++ T HH +VRLLG ++ G + +V E +G LK +L
Sbjct: 70 EASVMKGFTCHH--VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 126
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
T + +++ ++A + Y++ +VHRN+ +RN + +F ++G+FGM R
Sbjct: 127 P--TLQEMIQMAAEIADGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTR--- 178
Query: 538 DDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS 571
D +Y P W + D++++G+VL E+ S
Sbjct: 179 -DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 88 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 135
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 136 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSF 191
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 73/163 (44%), Gaps = 32/163 (19%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP V+L T D + YAKNG L ++ F +C F T
Sbjct: 88 HPFFVKLYFT-FQDDEKLYFGLSYAKNGELLKYIRK----IGSFDETCTRFYT------- 135
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
++ AL+Y+H +HR++K NI L+E+ + ++ +FG A+ ++ +++
Sbjct: 136 -AEIVSALEYLH---GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 191
Query: 542 -------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
SP+ + A S D++A G ++ ++++G P
Sbjct: 192 VGTAQYVSPELLTEKSACKSS--DLWALGCIIYQLVAGLPPFR 232
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 34/165 (20%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNI+ L DG H +LV E + G L D + ++ +F + +
Sbjct: 79 QHPNIITL-KDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSE-------REASF 125
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNI-FLDEEFNA---RVGNFGMAR--------- 534
+ + ++Y+H + VHR++K NI ++DE N R+ +FG A+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 535 ---CVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
C + +P+ + G DI++ GI+L +L+G TP
Sbjct: 183 MTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L +F + ++ +L
Sbjct: 70 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQL-- 120
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+ AL Y+ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 121 ----STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGK 173
Query: 549 NPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 73/165 (44%), Gaps = 34/165 (20%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNI+ L DG H +LV E + G L D + ++ +F + +
Sbjct: 79 QHPNIITL-KDVYDDGKHVYLVTELMRGGELLDKI-----LRQKFFSE-------REASF 125
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNI-FLDEEFNA---RVGNFGMAR--------- 534
+ + ++Y+H + VHR++K NI ++DE N R+ +FG A+
Sbjct: 126 VLHTIGKTVEYLH---SQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLL 182
Query: 535 ---CVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
C + +P+ + G DI++ GI+L +L+G TP
Sbjct: 183 MTPCYTANFVAPEVLKRQ--GYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 426 THHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQR 485
T H +V+L +T P +++ E+ GSL D+L K Q
Sbjct: 66 TLQHDKLVKL-HAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSK--------------QP 109
Query: 486 LRICLDV-AMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
L +D A + M + +Y+HR++++ NI + ++ +FG+AR + D+ + +
Sbjct: 110 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 169
Query: 545 FYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+ P W ++ D++++GI+L+E+++ G+ P
Sbjct: 170 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 212
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 87/207 (42%), Gaps = 54/207 (26%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIV+L D H+FLV E G L + + K F + ++ I
Sbjct: 65 HPNIVKL-HEVFHDQLHTFLVMELLNGGELFE----RIKKKKHF--------SETEASYI 111
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNI-FLDEEFN--ARVGNFGMAR----------- 534
+ A+ +MH V VHR++K N+ F DE N ++ +FG AR
Sbjct: 112 MRKLVSAVSHMHDV---GVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKT 168
Query: 535 -CVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTP----------------IN 577
C +P+ + N + D+++ G++L +LSGQ P +
Sbjct: 169 PCFTLHYAAPELLNQN--GYDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMK 226
Query: 578 RPRKKD---EGSVW--LSEKIKSILQA 599
+ +K D EG W +S++ K ++Q
Sbjct: 227 KIKKGDFSFEGEAWKNVSQEAKDLIQG 253
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKL---------------EMQLVQHATHHHPNIVRLL 436
G VY G N +++ E V K E +++ T HH +VRLL
Sbjct: 28 GMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLL 83
Query: 437 GTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
G ++ G + +V E +G LK +L T + +++ ++A +
Sbjct: 84 G-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP--TLQEMIQMAAEIADGM 140
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-- 553
Y++ +VHR++ +RN + +F ++G+FGM R + + D P W
Sbjct: 141 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 197
Query: 554 ---------SMGIDIFAYGIVLLEVLS 571
+ D++++G+VL E+ S
Sbjct: 198 PESLKDGVFTTSSDMWSFGVVLWEITS 224
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 92/212 (43%), Gaps = 45/212 (21%)
Query: 398 RLNGKNLAIKRTE--HEVITKLEMQLVQHATHH----------HPNIVRLLGTCLTDGPH 445
R G A+K E E ++ +++ V+ AT HP+I+ L+ + +
Sbjct: 116 RATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSS-F 174
Query: 446 SFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNP 505
FLVF+ + G L D+L +A+ + S +R L+ A+ ++H
Sbjct: 175 MFLVFDLMRKGELFDYLTEKVALSEKETRSI---------MRSLLE---AVSFLH---AN 219
Query: 506 SYVHRNIKSRNIFLDEEFNARVGNFGMA-----------RCVNDDTESPQFY-----STN 549
+ VHR++K NI LD+ R+ +FG + C +P+ T+
Sbjct: 220 NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETH 279
Query: 550 PASWSMGIDIFAYGIVLLEVLSGQTPINRPRK 581
P + +D++A G++L +L+G P R+
Sbjct: 280 PG-YGKEVDLWACGVILFTLLAGSPPFWHRRQ 310
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 84/206 (40%), Gaps = 39/206 (18%)
Query: 392 GAVYHGRLNGKNLAIK------------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTC 439
G ++ GR G ++ +K R +E +L + HPN++ +LG C
Sbjct: 24 GELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRI-------FSHPNVLPVLGAC 76
Query: 440 LTD-GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY 498
+ PH L+ + GSL + LH G F+ SQ ++ LD A +
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHEG----TNFVVDQ------SQAVKFALDXARGXAF 126
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM-------ARCVNDDTESPQFYSTNPA 551
+H + P + SR++ +DE+ AR+ + R +P+ P
Sbjct: 127 LH-TLEPLIPRHALNSRSVXIDEDXTARISXADVKFSFQSPGRXYAPAWVAPEALQKKPE 185
Query: 552 SWS-MGIDIFAYGIVLLEVLSGQTPI 576
+ D +++ ++L E+++ + P
Sbjct: 186 DTNRRSADXWSFAVLLWELVTREVPF 211
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKL---------------EMQLVQHATHHHPNIVRLL 436
G VY G N +++ E V K E +++ T HH +VRLL
Sbjct: 31 GMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLL 86
Query: 437 GTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
G ++ G + +V E +G LK +L T + +++ ++A +
Sbjct: 87 G-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP--TLQEMIQMAAEIADGM 143
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-- 553
Y++ +VHR++ +RN + +F ++G+FGM R + + D P W
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 554 ---------SMGIDIFAYGIVLLEVLS 571
+ D++++G+VL E+ S
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 87/207 (42%), Gaps = 37/207 (17%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKL---------------EMQLVQHATHHHPNIVRLL 436
G VY G N +++ E V K E +++ T HH +VRLL
Sbjct: 31 GMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLL 86
Query: 437 GTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
G ++ G + +V E +G LK +L T + +++ ++A +
Sbjct: 87 G-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP--TLQEMIQMAAEIADGM 143
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND-DTESPQFYSTNPASW-- 553
Y++ +VHR++ +RN + +F ++G+FGM R + + D P W
Sbjct: 144 AYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVRWMA 200
Query: 554 ---------SMGIDIFAYGIVLLEVLS 571
+ D++++G+VL E+ S
Sbjct: 201 PESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 76/163 (46%), Gaps = 29/163 (17%)
Query: 426 THHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQR 485
T H +V+L +T P +++ E+ GSL D+L K Q
Sbjct: 239 TLQHDKLVKL-HAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSK--------------QP 282
Query: 486 LRICLDV-AMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
L +D A + M + +Y+HR++++ NI + ++ +FG+AR + D+ + +
Sbjct: 283 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAR 342
Query: 545 FYSTNPASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
+ P W ++ D++++GI+L+E+++ G+ P
Sbjct: 343 EGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIP 385
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 53/213 (24%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS--- 446
G V+ G G+N+A+K + E E +L H NI+ + + +T S
Sbjct: 51 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 110
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ Y + GSL D+L + SC LRI L +A L ++H +
Sbjct: 111 WLITHYHEMGSLYDYLQ----LTTLDTVSC---------LRIVLSIASGLAHLHIEIFGT 157
Query: 504 --NPSYVHRNIKSRNIF------------------------LDEEFNARVGNFG-MARCV 536
P+ HR++KS+NI LD N RVG MA V
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 217
Query: 537 NDDTESPQFYSTNPASWSMGIDIFAYGIVLLEV 569
D+T + + +DI+A+G+VL EV
Sbjct: 218 LDETIQVDCFDSYKR-----VDIWAFGLVLWEV 245
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 28/170 (16%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCY 477
E +++ T HH +VRLLG ++ G + +V E +G LK +L
Sbjct: 69 EASVMKGFTCHH--VVRLLG-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPP 125
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
T + +++ ++A + Y++ +VHR++ +RN + +F ++G+FGM R
Sbjct: 126 P--TLQEMIQMAAEIADGMAYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR--- 177
Query: 538 DDTESPQFYSTN-----PASW-----------SMGIDIFAYGIVLLEVLS 571
D +Y P W + D++++G+VL E+ S
Sbjct: 178 -DIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITS 226
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L +F + ++ +L
Sbjct: 450 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQL-- 500
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+ AL Y+ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 501 ----STALAYLE---SKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 549 NPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 53/213 (24%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS--- 446
G V+ G G+N+A+K + E E +L H NI+ + + +T S
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ Y + GSL D+L + SC LRI L +A L ++H +
Sbjct: 82 WLITHYHEMGSLYDYLQ----LTTLDTVSC---------LRIVLSIASGLAHLHIEIFGT 128
Query: 504 --NPSYVHRNIKSRNIF------------------------LDEEFNARVGNFG-MARCV 536
P+ HR++KS+NI LD N RVG MA V
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 537 NDDTESPQFYSTNPASWSMGIDIFAYGIVLLEV 569
D+T + + +DI+A+G+VL EV
Sbjct: 189 LDETIQVDCFDSYKR-----VDIWAFGLVLWEV 216
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 64 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 107
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 108 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 156
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 574 TPINRPR 580
P + R
Sbjct: 217 PPFSEHR 223
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 64 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 107
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 108 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 156
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 574 TPINRPR 580
P + R
Sbjct: 217 PPFSEHR 223
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 64 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 107
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 108 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 156
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 157 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 216
Query: 574 TPINRPR 580
P + R
Sbjct: 217 PPFSEHR 223
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 63 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 106
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 107 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 155
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 156 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 215
Query: 574 TPINRPR 580
P + R
Sbjct: 216 PPFSEHR 222
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L +F + ++ +L
Sbjct: 450 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQL-- 500
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+ AL Y+ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 501 ----STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 553
Query: 549 NPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 554 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 70 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 113
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 114 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 162
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 163 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 222
Query: 574 TPINRPR 580
P + R
Sbjct: 223 PPFSEHR 229
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKL---------------EMQLVQHATHHHPNIVRLL 436
G VY G N +++ E V K E +++ T HH +VRLL
Sbjct: 31 GMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLL 86
Query: 437 GTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
G ++ G + +V E +G LK +L T + +++ ++A +
Sbjct: 87 G-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP--TLQEMIQMAAEIADGM 143
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-----PA 551
Y++ +VHR++ +RN + +F ++G+FGM R D +Y P
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETDYYRKGGKGLLPV 196
Query: 552 SW-----------SMGIDIFAYGIVLLEVLS 571
W + D++++G+VL E+ S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 28/167 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L +F + ++ +L
Sbjct: 70 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFLQ-----VRKFSLDLASLILYAYQL-- 120
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST 548
+ AL Y+ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 121 ----STALAYLE---SKRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGK 173
Query: 549 NPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 174 LPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 87/213 (40%), Gaps = 53/213 (24%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS--- 446
G V+ G G+N+A+K + E E +L H NI+ + + +T S
Sbjct: 22 GEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQL 81
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ Y + GSL D+L + SC LRI L +A L ++H +
Sbjct: 82 WLITHYHEMGSLYDYLQ----LTTLDTVSC---------LRIVLSIASGLAHLHIEIFGT 128
Query: 504 --NPSYVHRNIKSRNIF------------------------LDEEFNARVGNFG-MARCV 536
P+ HR++KS+NI LD N RVG MA V
Sbjct: 129 QGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMAPEV 188
Query: 537 NDDTESPQFYSTNPASWSMGIDIFAYGIVLLEV 569
D+T + + +DI+A+G+VL EV
Sbjct: 189 LDETIQVDCFDSYKR-----VDIWAFGLVLWEV 216
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 87/211 (41%), Gaps = 45/211 (21%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKL---------------EMQLVQHATHHHPNIVRLL 436
G VY G N +++ E V K E +++ T HH +VRLL
Sbjct: 31 GMVYEG--NARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH--VVRLL 86
Query: 437 GTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMAL 496
G ++ G + +V E +G LK +L T + +++ ++A +
Sbjct: 87 G-VVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPP--TLQEMIQMAAEIADGM 143
Query: 497 QYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-----PA 551
Y++ +VHR++ +RN + +F ++G+FGM R D +Y P
Sbjct: 144 AYLN---AKKFVHRDLAARNCMVAHDFTVKIGDFGMTR----DIYETAYYRKGGKGLLPV 196
Query: 552 SW-----------SMGIDIFAYGIVLLEVLS 571
W + D++++G+VL E+ S
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 401 GKNLAIKRTEHEVITKLEMQ--LVQHATH----HHPNIVRLLGTCLTDGPHSFLVFEYAK 454
G+ +A+K +V+ K +MQ + + ++ HP+I++L + +V EYA
Sbjct: 38 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY-DVIKSKDEIIMVIEYAG 96
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
N L D++ M Q + R + A++Y H VHR++K
Sbjct: 97 N-ELFDYIVQRDKMSEQ------------EARRFFQQIISAVEYCH---RHKIVHRDLKP 140
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDIFAYGI 564
N+ LDE N ++ +FG++ + D SP + + S + +D+++ G+
Sbjct: 141 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 200
Query: 565 VLLEVLSGQTPIN 577
+L +L + P +
Sbjct: 201 ILYVMLCRRLPFD 213
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 86/192 (44%), Gaps = 33/192 (17%)
Query: 402 KNLAIKRTEHEVITKLEMQL-VQHATHH-----HPNIVRLLGTCLTDGPHSFLVFEYAKN 455
+ +A+K +++ K +M + V+ + HP+I++L +T +V EYA
Sbjct: 35 QKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDV-ITTPTDIVMVIEYA-G 92
Query: 456 GSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSR 515
G L D++ M T + R + A++Y H VHR++K
Sbjct: 93 GELFDYIVEKKRM------------TEDEGRRFFQQIICAIEYCHR---HKIVHRDLKPE 137
Query: 516 NIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDIFAYGIV 565
N+ LD+ N ++ +FG++ + D SP + + + + +D+++ GIV
Sbjct: 138 NLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIV 197
Query: 566 LLEVLSGQTPIN 577
L +L G+ P +
Sbjct: 198 LYVMLVGRLPFD 209
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 401 GKNLAIKRTEHEVITKLEMQ--LVQHATH----HHPNIVRLLGTCLTDGPHSFLVFEYAK 454
G+ +A+K +V+ K +MQ + + ++ HP+I++L + +V EYA
Sbjct: 39 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY-DVIKSKDEIIMVIEYAG 97
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
N L D++ M Q + R + A++Y H VHR++K
Sbjct: 98 N-ELFDYIVQRDKMSEQ------------EARRFFQQIISAVEYCH---RHKIVHRDLKP 141
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDIFAYGI 564
N+ LDE N ++ +FG++ + D SP + + S + +D+++ G+
Sbjct: 142 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 201
Query: 565 VLLEVLSGQTPIN 577
+L +L + P +
Sbjct: 202 ILYVMLCRRLPFD 214
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 401 GKNLAIKRTEHEVITKLEMQ--LVQHATH----HHPNIVRLLGTCLTDGPHSFLVFEYAK 454
G+ +A+K +V+ K +MQ + + ++ HP+I++L + +V EYA
Sbjct: 33 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLY-DVIKSKDEIIMVIEYAG 91
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
N L D++ M Q + R + A++Y H VHR++K
Sbjct: 92 N-ELFDYIVQRDKMSEQ------------EARRFFQQIISAVEYCH---RHKIVHRDLKP 135
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDIFAYGI 564
N+ LDE N ++ +FG++ + D SP + + S + +D+++ G+
Sbjct: 136 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 195
Query: 565 VLLEVLSGQTPIN 577
+L +L + P +
Sbjct: 196 ILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/193 (22%), Positives = 86/193 (44%), Gaps = 33/193 (17%)
Query: 401 GKNLAIKRTEHEVITKLEMQ--LVQHATH----HHPNIVRLLGTCLTDGPHSFLVFEYAK 454
G+ +A+K +V+ K +MQ + + ++ HP+I++L + +V EYA
Sbjct: 29 GQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDV-IKSKDEIIMVIEYAG 87
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
N L D++ M Q + R + A++Y H VHR++K
Sbjct: 88 N-ELFDYIVQRDKMSEQ------------EARRFFQQIISAVEYCH---RHKIVHRDLKP 131
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDT------ESPQFYSTNPASWSM----GIDIFAYGI 564
N+ LDE N ++ +FG++ + D SP + + S + +D+++ G+
Sbjct: 132 ENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGV 191
Query: 565 VLLEVLSGQTPIN 577
+L +L + P +
Sbjct: 192 ILYVMLCRRLPFD 204
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 79/194 (40%), Gaps = 42/194 (21%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
T V K + + HP+IV+L+G +T+ P +++ E G L+ +L
Sbjct: 55 TSDSVREKFLQEALTMRQFDHPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL------ 106
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDE 521
Q + LD+A + Y + ++ + +VHR+I +RN+ +
Sbjct: 107 ---------------QVRKYSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSS 151
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL 570
++G+FG++R + D T P W + D++ +G+ + E+L
Sbjct: 152 NDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEIL 211
Query: 571 -SGQTPINRPRKKD 583
G P + D
Sbjct: 212 MHGVKPFQGVKNND 225
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 98 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 134
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 135 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 194
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 195 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 73 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 109
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 110 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 169
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 170 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 67 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 103
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 104 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 163
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 164 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 72 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 108
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 109 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 168
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 169 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGXLLDYVRE----HKDNIGSQY-LLNW-- 123
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 124 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 174
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 175 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 70 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 106
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 80/190 (42%), Gaps = 30/190 (15%)
Query: 417 LEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASC 476
++ ++ +A +H N+V+ G +G +L EY G L D + + M
Sbjct: 52 IKKEICINAMLNHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------ 104
Query: 477 YCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA--- 533
R + + Y+H + HR+IK N+ LDE N ++ +FG+A
Sbjct: 105 ------PDAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVF 155
Query: 534 RCVNDDTESPQFYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK- 582
R N + + T P + +D+++ GIVL +L+G+ P ++P
Sbjct: 156 RYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSC 215
Query: 583 DEGSVWLSEK 592
E S W +K
Sbjct: 216 QEYSDWKEKK 225
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 36/159 (22%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRL 486
H +IVRLLG C G LV +Y GSL D + H G A+ Q + L W
Sbjct: 92 HAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLL------LNWG--- 139
Query: 487 RICLDVAMALQYMH-HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTESPQ 544
+ +A + Y+ H M VHRN+ +RN+ L +V +FG+A + DD +
Sbjct: 140 ---VQIAKGMYYLEEHGM----VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 192
Query: 545 FYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
+ P W M + D+++YG+ + E+++
Sbjct: 193 SEAKTPIKW-MALESIHFGKYTHQSDVWSYGVTVWELMT 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/174 (21%), Positives = 74/174 (42%), Gaps = 42/174 (24%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV+L+G +T+ P +++ E G L+ +L Q +
Sbjct: 70 HPHIVKLIGV-ITENP-VWIIMELCTLGELRSFL---------------------QVRKY 106
Query: 489 CLDVAMALQYMH-------HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE 541
LD+A + Y + ++ + +VHR+I +RN+ + ++G+FG++R + D T
Sbjct: 107 SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 166
Query: 542 SPQFYSTNPASW-----------SMGIDIFAYGIVLLEVL-SGQTPINRPRKKD 583
P W + D++ +G+ + E+L G P + D
Sbjct: 167 YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 129
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 130 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 180
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 181 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 73 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 123
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 124 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 174
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 175 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 126
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 127 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 177
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 178 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 124
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 125 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 175
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 176 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 125
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 126 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 176
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 177 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 36/159 (22%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL--HGGLAMKNQFIASCYCFLTWSQRL 486
H +IVRLLG C G LV +Y GSL D + H G A+ Q + L W
Sbjct: 74 HAHIVRLLGLC--PGSSLQLVTQYLPLGSLLDHVRQHRG-ALGPQLL------LNWG--- 121
Query: 487 RICLDVAMALQYMH-HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV-NDDTESPQ 544
+ +A + Y+ H M VHRN+ +RN+ L +V +FG+A + DD +
Sbjct: 122 ---VQIAKGMYYLEEHGM----VHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLY 174
Query: 545 FYSTNPASWSMGI------------DIFAYGIVLLEVLS 571
+ P W M + D+++YG+ + E+++
Sbjct: 175 SEAKTPIKW-MALESIHFGKYTHQSDVWSYGVTVWELMT 212
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRK-KDEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSXQEYSDWKEKK 224
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 106 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 156
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 157 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 207
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 208 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 61 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 107
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 108 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 164
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 165 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 223
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 53 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 107
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 108 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 152
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
NFG + C D P+ +D+++ G++ E L G+ P
Sbjct: 153 NFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 203 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 246
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 247 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 295
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 296 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 355
Query: 574 TPINRPR 580
P + R
Sbjct: 356 PPFSEHR 362
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/187 (22%), Positives = 83/187 (44%), Gaps = 42/187 (22%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E++ KL +HP I+++ D ++V E + G L D + G
Sbjct: 189 TEIEILKKL----------NHPCIIKIKN--FFDAEDYYIVLELMEGGELFDKVVG---- 232
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL---DEEFNA 525
N+ + C L + Q L +A+QY+H +HR++K N+ L +E+
Sbjct: 233 -NKRLKEATCKLYFYQML-------LAVQYLHE---NGIIHRDLKPENVLLSSQEEDCLI 281
Query: 526 RVGNFGMARCVNDDT------ESPQFY------STNPASWSMGIDIFAYGIVLLEVLSGQ 573
++ +FG ++ + + + +P + S A ++ +D ++ G++L LSG
Sbjct: 282 KITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGY 341
Query: 574 TPINRPR 580
P + R
Sbjct: 342 PPFSEHR 348
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGXLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 82 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 132
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 133 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 183
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 184 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 392 GAVYHGRLNGK-----NLAIKRTEHEVI----TKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VY G N+A+K + + K + V HP+IV+L+G + +
Sbjct: 38 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIE 95
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
++++ E G L +L +N+ + +S L+IC A+ Y+ +
Sbjct: 96 EEPTWIIMELYPYGELGHYLE-----RNKNSLKVLTLVLYS--LQIC----KAMAYLESI 144
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW--------- 553
+ VHR+I RNI + ++G+FG++R + D+ + P W
Sbjct: 145 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 201
Query: 554 --SMGIDIFAYGIVLLEVLS-GQTPINRPRKKD 583
+ D++ + + + E+LS G+ P KD
Sbjct: 202 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 63 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 109
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 110 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 166
Query: 545 FYSTNPAS----------WSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 167 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 225
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E + E++++ + +H NIV LLG C GP + ++ EY G L ++L
Sbjct: 68 TEREALMS-ELKVLSYLGNHM-NIVNLLGACTIGGP-TLVITEYCCYGDLLNFLR---RK 121
Query: 469 KNQFIAS---------CYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
++ FI S L L VA + ++ + + +HR++ +RNI L
Sbjct: 122 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 178
Query: 520 DEEFNARVGNFGMARCV-NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLL 567
++ +FG+AR + ND + + P W + D+++YGI L
Sbjct: 179 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 238
Query: 568 EVLS-GQTP 575
E+ S G +P
Sbjct: 239 ELFSLGSSP 247
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
NFG + C D P+ +D+++ G++ E L G+ P
Sbjct: 154 NFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P + + G+ L D +++ EY GS D L G L +Q I
Sbjct: 80 PYVTKYYGSYLKDT-KLWIIMEYLGGGSALDLLEPGP-------------LDETQIATIL 125
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
++ L Y+H + +HR+IK+ N+ L E ++ +FG+A + D +
Sbjct: 126 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 182
Query: 550 P----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P +++ DI++ GI +E+ G+ P
Sbjct: 183 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 36/201 (17%)
Query: 392 GAVYHG--RLNGKNLAIKRTE-----HEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGP 444
G+VY + G+ +AIK+ E+I E+ ++Q P++V+ G+ +
Sbjct: 43 GSVYKAIHKETGQIVAIKQVPVESDLQEIIK--EISIMQQC--DSPHVVKYYGSYFKNT- 97
Query: 445 HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
++V EY GS+ D + ++N+ LT + I L+Y+H +
Sbjct: 98 DLWIVMEYCGAGSVSDIIR----LRNKT-------LTEDEIATILQSTLKGLEYLHFMRK 146
Query: 505 PSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP----------ASWS 554
+HR+IK+ NI L+ E +A++ +FG+A + D P ++
Sbjct: 147 ---IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYN 203
Query: 555 MGIDIFAYGIVLLEVLSGQTP 575
DI++ GI +E+ G+ P
Sbjct: 204 CVADIWSLGITAIEMAEGKPP 224
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+H N+V+ G +G +L EY G L D + + M R
Sbjct: 62 NHENVVKFYGH-RREGNIQYLFLEYCSGGELFDRIEPDIGMPE------------PDAQR 108
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA---RCVNDDTESPQ 544
+ + Y+H + HR+IK N+ LDE N ++ +FG+A R N + +
Sbjct: 109 FFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNK 165
Query: 545 FYSTNP----------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK-DEGSVWLSEK 592
T P + +D+++ GIVL +L+G+ P ++P E S W +K
Sbjct: 166 MCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSDSCQEYSDWKEKK 224
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 129
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 130 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 180
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 181 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 125
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 126 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 176
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 177 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/205 (21%), Positives = 85/205 (41%), Gaps = 40/205 (19%)
Query: 392 GAVYHG--RLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLG----------TC 439
G V+ R++GK IKR ++ K E ++ A H NIV G T
Sbjct: 25 GQVFKAKHRIDGKTYVIKRVKYNN-EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETS 83
Query: 440 LTDGPHS-----FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAM 494
+ S F+ E+ G+L+ W+ K + + L + +
Sbjct: 84 SKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLA----------LELFEQITK 133
Query: 495 ALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST------ 548
+ Y+H + ++R++K NIFL + ++G+FG+ + +D + + T
Sbjct: 134 GVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYMSP 190
Query: 549 ---NPASWSMGIDIFAYGIVLLEVL 570
+ + +D++A G++L E+L
Sbjct: 191 EQISSQDYGKEVDLYALGLILAELL 215
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 392 GAVYHGRLNGK-----NLAIKRTEHEVI----TKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VY G N+A+K + + K + V HP+IV+L+G + +
Sbjct: 22 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIE 79
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
++++ E G L +L +N+ + +S L+IC A+ Y+ +
Sbjct: 80 EEPTWIIMELYPYGELGHYLE-----RNKNSLKVLTLVLYS--LQIC----KAMAYLESI 128
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW--------- 553
+ VHR+I RNI + ++G+FG++R + D+ + P W
Sbjct: 129 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 185
Query: 554 --SMGIDIFAYGIVLLEVLS-GQTPINRPRKKD 583
+ D++ + + + E+LS G+ P KD
Sbjct: 186 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 125
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 126 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 176
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 177 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E + E++++ + +H NIV LLG C GP + ++ EY G L ++L
Sbjct: 84 TEREALMS-ELKVLSYLGNHM-NIVNLLGACTIGGP-TLVITEYCCYGDLLNFLR---RK 137
Query: 469 KNQFIAS---------CYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
++ FI S L L VA + ++ + + +HR++ +RNI L
Sbjct: 138 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 194
Query: 520 DEEFNARVGNFGMARCV-NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLL 567
++ +FG+AR + ND + + P W + D+++YGI L
Sbjct: 195 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 254
Query: 568 EVLS-GQTP 575
E+ S G +P
Sbjct: 255 ELFSLGSSP 263
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 75 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 125
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 126 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 176
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 177 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 27/156 (17%)
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P + + G+ L D +++ EY GS D L G + Q IA+ I
Sbjct: 65 PYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEPGPLDETQ-IAT------------IL 110
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
++ L Y+H + +HR+IK+ N+ L E ++ +FG+A + D +
Sbjct: 111 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGT 167
Query: 550 P----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P +++ DI++ GI +E+ G+ P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/213 (22%), Positives = 90/213 (42%), Gaps = 37/213 (17%)
Query: 392 GAVYHGRLNGK-----NLAIKRTEHEVI----TKLEMQLVQHATHHHPNIVRLLGTCLTD 442
G VY G N+A+K + + K + V HP+IV+L+G + +
Sbjct: 26 GEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIG--IIE 83
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
++++ E G L +L +N+ + +S L+IC A+ Y+ +
Sbjct: 84 EEPTWIIMELYPYGELGHYLE-----RNKNSLKVLTLVLYS--LQIC----KAMAYLESI 132
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPASW--------- 553
+ VHR+I RNI + ++G+FG++R + D+ + P W
Sbjct: 133 ---NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFR 189
Query: 554 --SMGIDIFAYGIVLLEVLS-GQTPINRPRKKD 583
+ D++ + + + E+LS G+ P KD
Sbjct: 190 RFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 124
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 125 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 175
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 176 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGM----------ARCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG A C D P+ +D+++ G++ E L G+ P
Sbjct: 154 DFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G + L
Sbjct: 56 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPRGEVYKELQKLSKF 110
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 111 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 156 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 97 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 147
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 148 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 198
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 199 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 129
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 130 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 180
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 181 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 66 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 116
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 117 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 167
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 168 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 215
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 78 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 128
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 129 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 179
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 180 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 227
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E + E++++ + +H NIV LLG C GP + ++ EY G L ++L
Sbjct: 91 TEREALMS-ELKVLSYLGNHM-NIVNLLGACTIGGP-TLVITEYCCYGDLLNFLR---RK 144
Query: 469 KNQFIAS---------CYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
++ FI S L L VA + ++ + + +HR++ +RNI L
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 201
Query: 520 DEEFNARVGNFGMARCV-NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLL 567
++ +FG+AR + ND + + P W + D+++YGI L
Sbjct: 202 THGRITKICDFGLARHIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 568 EVLS-GQTP 575
E+ S G +P
Sbjct: 262 ELFSLGSSP 270
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E + E++++ + +H NIV LLG C GP + ++ EY G L ++L
Sbjct: 91 TEREALMS-ELKVLSYLGNHM-NIVNLLGACTIGGP-TLVITEYCCYGDLLNFLR---RK 144
Query: 469 KNQFIAS---------CYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
++ FI S L L VA + ++ + + +HR++ +RNI L
Sbjct: 145 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 201
Query: 520 DEEFNARVGNFGMARCV-NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLL 567
++ +FG+AR + ND + + P W + D+++YGI L
Sbjct: 202 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 261
Query: 568 EVLS-GQTP 575
E+ S G +P
Sbjct: 262 ELFSLGSSP 270
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 78/169 (46%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 69 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 119
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG+A+ + E +
Sbjct: 120 ----CVQIAEGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLG--AEEKE 170
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 171 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 67/156 (42%), Gaps = 27/156 (17%)
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P + + G+ L D +++ EY GS D L G + Q IA+ I
Sbjct: 65 PYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEPGPLDETQ-IAT------------IL 110
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
++ L Y+H + +HR+IK+ N+ L E ++ +FG+A + D +
Sbjct: 111 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 167
Query: 550 P----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P +++ DI++ GI +E+ G+ P
Sbjct: 168 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 31/189 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
TE E + E++++ + +H NIV LLG C GP + ++ EY G L ++L
Sbjct: 86 TEREALMS-ELKVLSYLGNHM-NIVNLLGACTIGGP-TLVITEYCCYGDLLNFLR---RK 139
Query: 469 KNQFIAS---------CYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
++ FI S L L VA + ++ + + +HR++ +RNI L
Sbjct: 140 RDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILL 196
Query: 520 DEEFNARVGNFGMARCV-NDDTESPQFYSTNPASW-----------SMGIDIFAYGIVLL 567
++ +FG+AR + ND + + P W + D+++YGI L
Sbjct: 197 THGRITKICDFGLARDIKNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLW 256
Query: 568 EVLS-GQTP 575
E+ S G +P
Sbjct: 257 ELFSLGSSP 265
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVND 538
++A+ L ++ + ++R++K N+ LD E + ++ +FGM + C
Sbjct: 450 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 506
Query: 539 DTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
D +P+ + P + +D +A+G++L E+L+GQ P
Sbjct: 507 DYIAPEIIAYQP--YGKSVDWWAFGVLLYEMLAGQAPF 542
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 124
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 125 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 175
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 176 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 124
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 125 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 175
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 176 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGM----------ARCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG A C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/156 (23%), Positives = 65/156 (41%), Gaps = 27/156 (17%)
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC 489
P + + G+ L D +++ EY GS D L G L +Q I
Sbjct: 85 PYVTKYYGSYLKD-TKLWIIMEYLGGGSALDLLEPGP-------------LDETQIATIL 130
Query: 490 LDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN 549
++ L Y+H + +HR+IK+ N+ L E ++ +FG+A + D +
Sbjct: 131 REILKGLDYLH---SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGT 187
Query: 550 P----------ASWSMGIDIFAYGIVLLEVLSGQTP 575
P +++ DI++ GI +E+ G+ P
Sbjct: 188 PFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 76 ASVDNPHVCRLLGICLTSTVQ--LIMQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 126
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 127 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 177
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 178 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDSTRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKKVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGM----------ARCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG A C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRAALCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 57/234 (24%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG----GLAMKNQFIASCYCFLTW 482
+HPNIV+LL T+ +LVFE+ + LKD++ G+ + + Y F
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEFL-SMDLKDFMDASALTGIPLP---LIKSYLF--- 113
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-------- 534
Q L+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 114 -QLLQ-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 162
Query: 535 ----CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 163 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 105/234 (44%), Gaps = 57/234 (24%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 61
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG----GLAMKNQFIASCYCFLTW 482
+HPNIV+LL T+ +LVFE+ + LKD++ G+ + + Y F
Sbjct: 62 -NHPNIVKLLDVIHTEN-KLYLVFEFL-SMDLKDFMDASALTGIPLP---LIKSYLF--- 112
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-------- 534
Q L+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 113 -QLLQ-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT 161
Query: 535 ----CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 162 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 77 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 131
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 132 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 176
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 177 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 77 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 131
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 132 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 176
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 177 DFGWSVHAPSSRRDDLCGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 17/98 (17%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVND 538
++A+ L ++ + ++R++K N+ LD E + ++ +FGM + C
Sbjct: 129 EIAIGLFFLQ---SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTP 185
Query: 539 DTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
D +P+ + P + +D +A+G++L E+L+GQ P
Sbjct: 186 DYIAPEIIAYQP--YGKSVDWWAFGVLLYEMLAGQAPF 221
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 67/159 (42%), Gaps = 24/159 (15%)
Query: 428 HHPNIVRLLGT--CLTDGPHSF-LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
HPNIVR + G LV E +G+LK +L K + + S W
Sbjct: 83 QHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRS------W-- 134
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL-DEEFNARVGNFGMARCVNDD---- 539
C + LQ++H P +HR++K NIF+ + ++G+ G+A
Sbjct: 135 ----CRQILKGLQFLH-TRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKA 189
Query: 540 -TESPQFYSTN--PASWSMGIDIFAYGIVLLEVLSGQTP 575
+P+F + + +D++A+G LE + + P
Sbjct: 190 VIGTPEFXAPEXYEEKYDESVDVYAFGXCXLEXATSEYP 228
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 103/234 (44%), Gaps = 57/234 (24%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 59
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG----GLAMKNQFIASCYCFLTW 482
+HPNIV+LL T+ +LVFE+ LKD++ G+ + + Y F
Sbjct: 60 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQ-DLKDFMDASALTGIPLP---LIKSYLF--- 110
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-------- 534
Q L+ +A + H V+ HR++K N+ ++ E ++ +FG+AR
Sbjct: 111 -QLLQ-----GLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGLARAFGVPVRT 159
Query: 535 ----CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 160 YXHEVVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 40/233 (17%)
Query: 382 EKFNSSNRIEGAVY------HGRLNGKNLAIKR----TEHEVITKLEMQLVQHATH-HHP 430
EK+ +I Y R G+ +AIK+ + VI K+ ++ ++ HP
Sbjct: 3 EKYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
N+V LL LVFEY + L + + + S +TW
Sbjct: 63 NLVNLL-EVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKS----ITWQ------- 110
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN------DDTESPQ 544
LQ ++ + +HR++K NI + + ++ +FG AR + DD + +
Sbjct: 111 ----TLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR 166
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEK 592
+Y + + +D++A G V E+LSG P+ P K D ++L K
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG-VPL-WPGKSDVDQLYLIRK 217
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 72/178 (40%), Gaps = 32/178 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q A HHPNI+RL D +L+ EYA G L L
Sbjct: 66 VEHQLRREIEIQ----AHLHHPNILRLYNY-FYDRRRIYLILEYAPRGELYKELQKSCTF 120
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ I ++A AL Y H +HR+IK N+ L + ++
Sbjct: 121 DEQRTAT------------IMEELADALMYCH---GKKVIHRDIKPENLLLGLKGELKIA 165
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+FG + C D P+ + +D++ G++ E+L G P
Sbjct: 166 DFGWSVHAPSLRRKTMCGTLDYLPPEMIEGR--MHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 75/178 (42%), Gaps = 32/178 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 68 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 122
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 123 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 167
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 168 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 39/197 (19%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
+ + ++ +E++T L+ +L +HPNIV T + D ++V + GS KD
Sbjct: 42 RRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKDL 100
Query: 462 LHGGLAMKNQFIASCYCFLTWSQRLRICL---DVAMALQYMHHVMNPSYVHRNIKSRNIF 518
+ C F+ L I V AL Y+HH+ YVHR++K+ +I
Sbjct: 101 I-------------CTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL 144
Query: 519 LDEE----FNARVGNFGM------ARCVNDDTE---------SPQFYSTNPASWSMGIDI 559
+ + + N M R V+D + SP+ N + DI
Sbjct: 145 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 204
Query: 560 FAYGIVLLEVLSGQTPI 576
++ GI E+ +G P
Sbjct: 205 YSVGITACELANGHVPF 221
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 52 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 106
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 107 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 152 DFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 52 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 106
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 107 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 152 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 53 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 107
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 108 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 152
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 153 DFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 154 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRTELCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 71/164 (43%), Gaps = 34/164 (20%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNI+ L DG + ++V E K G L D + ++ +F + +
Sbjct: 74 QHPNIITL-KDVYDDGKYVYVVTELMKGGELLDKI-----LRQKFFSE-------REASA 120
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNI-FLDEEFN---ARVGNFGMAR--------- 534
+ + ++Y+H VHR++K NI ++DE N R+ +FG A+
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 535 ---CVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTP 575
C + +P+ + DI++ G++L +L+G TP
Sbjct: 178 MTPCYTANFVAPEVLERQ--GYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 56 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 111 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 156 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 74 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 124
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 125 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 175
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 176 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 56 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 111 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 156 DFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 80/197 (40%), Gaps = 39/197 (19%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
+ + ++ +E++T L+ +L +HPNIV T + D ++V + GS KD
Sbjct: 58 RRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADN-ELWVVTSFMAYGSAKDL 116
Query: 462 LHGGLAMKNQFIASCYCFLTWSQRLRICL---DVAMALQYMHHVMNPSYVHRNIKSRNIF 518
+ C F+ L I V AL Y+HH+ YVHR++K+ +I
Sbjct: 117 I-------------CTHFMDGMNELAIAYILQGVLKALDYIHHM---GYVHRSVKASHIL 160
Query: 519 LDEE----FNARVGNFGM------ARCVNDDTE---------SPQFYSTNPASWSMGIDI 559
+ + + N M R V+D + SP+ N + DI
Sbjct: 161 ISVDGKVYLSGLRSNLSMISHGQRQRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDI 220
Query: 560 FAYGIVLLEVLSGQTPI 576
++ GI E+ +G P
Sbjct: 221 YSVGITACELANGHVPF 237
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 45.8 bits (107), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 72 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 122
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 123 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 173
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 174 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNI+ L DG + ++V E K G L D + ++ +F + +
Sbjct: 74 QHPNII-TLKDVYDDGKYVYVVTELXKGGELLDKI-----LRQKFFSE-------REASA 120
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNI-FLDEEFN---ARVGNFGMA---RCVNDDT 540
+ + ++Y+H VHR++K NI ++DE N R+ +FG A R N
Sbjct: 121 VLFTITKTVEYLH---AQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLL 177
Query: 541 ESPQFYSTNPA-------SWSMGIDIFAYGIVLLEVLSGQTP 575
+P + + A + DI++ G++L L+G TP
Sbjct: 178 XTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 77/169 (45%), Gaps = 35/169 (20%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ +P++ RLLG CLT L+ + G L D++ I S Y L W
Sbjct: 79 ASVDNPHVCRLLGICLTSTVQ--LITQLMPFGCLLDYVRE----HKDNIGSQY-LLNW-- 129
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQ 544
C+ +A + Y+ + VHR++ +RN+ + + ++ +FG A+ + E +
Sbjct: 130 ----CVQIAKGMNYLE---DRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLG--AEEKE 180
Query: 545 FYSTN---PASWSMGI------------DIFAYGIVLLEVLS-GQTPIN 577
+++ P W M + D+++YG+ + E+++ G P +
Sbjct: 181 YHAEGGKVPIKW-MALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 56 VEHQLRREVEIQ----SHLRHPNILRLYGY-FHDATRVYLILEYAPLGTVYRELQKLSKF 110
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 111 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 156 DFGWSVHAPSSRRTTLCGTLDYLPPE--XIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q R A + + H+ + ++R++K N+ LD++ N R+ + G+A +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 544 QFYSTNPA----------SWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
+ Y+ P + +D FA G+ L E+++ + P +K E
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/133 (20%), Positives = 59/133 (44%), Gaps = 22/133 (16%)
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
F+ E+ G+L+ W+ K + + L + + + Y+H +
Sbjct: 110 FIQMEFCDKGTLEQWIEKRRGEKLDKVLA----------LELFEQITKGVDYIH---SKK 156
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYST---------NPASWSMGI 557
+HR++K NIFL + ++G+FG+ + +D + + T + + +
Sbjct: 157 LIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRSKGTLRYMSPEQISSQDYGKEV 216
Query: 558 DIFAYGIVLLEVL 570
D++A G++L E+L
Sbjct: 217 DLYALGLILAELL 229
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q R A + + H+ + ++R++K N+ LD++ N R+ + G+A +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 544 QFYSTNPA----------SWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
+ Y+ P + +D FA G+ L E+++ + P +K E
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 39/183 (21%)
Query: 429 HPNIVRLLGTCLTDGP---HSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQR 485
HPN+V+L+ + D P H ++VFE G + + L+ Q
Sbjct: 95 HPNVVKLVE--VLDDPNEDHLYMVFELVNQGPVME-------------VPTLKPLSEDQA 139
Query: 486 LRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR-------CVND 538
D+ ++Y+H+ +HR+IK N+ + E+ + ++ +FG++ +++
Sbjct: 140 RFYFQDLIKGIEYLHY---QKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSN 196
Query: 539 DTESPQFYSTNPASWSMGI------DIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEK 592
+P F + S + I D++A G+ L + GQ P DE + L K
Sbjct: 197 TVGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPF-----MDERIMCLHSK 251
Query: 593 IKS 595
IKS
Sbjct: 252 IKS 254
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 398 RLNGKNLAIKRTEH--EVITKL-----EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVF 450
RL G+ +AIK+ + +V+T E+++++H H NI+ + P+
Sbjct: 77 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD--NIIAIKDILRPTVPYG---- 130
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
E+ + D + L +Q I S LT + L+YMH + +HR
Sbjct: 131 EFKSVYVVLDLMESDL---HQIIHSSQP-LTLEHVRYFLYQLLRGLKYMH---SAQVIHR 183
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPAS---------------WSM 555
++K N+ ++E ++G+FGMAR + Q++ T + ++
Sbjct: 184 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ 243
Query: 556 GIDIFAYGIVLLEVLS 571
ID+++ G + E+L+
Sbjct: 244 AIDLWSVGCIFGEMLA 259
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 50 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 104
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 105 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 149
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 150 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q R A + + H+ + ++R++K N+ LD++ N R+ + G+A +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 544 QFYSTNPA----------SWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
+ Y+ P + +D FA G+ L E+++ + P +K E
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 484 QRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESP 543
Q R A + + H+ + ++R++K N+ LD++ N R+ + G+A +
Sbjct: 287 QEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKT 346
Query: 544 QFYSTNPA----------SWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
+ Y+ P + +D FA G+ L E+++ + P +K E
Sbjct: 347 KGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVE 397
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 154 DFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 51 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 105
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 106 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 150
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 151 DFGWSVHAPSSRRTXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 154 DFGWSVHAPSSRRXXLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 55 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 109
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 110 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 154
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 155 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 54 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 108
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 109 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 153
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 154 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNIVRL + + H +LVF D + GG ++ Y S ++
Sbjct: 86 QHPNIVRLHDSIQEESFH-YLVF---------DLVTGGELFEDIVAREFYSEADASHCIQ 135
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE--- 541
L+ ++ Y H + VHRN+K N+ L + ++ +FG+A VND
Sbjct: 136 QILE---SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 189
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
SP+ +P +S +DI+A G++L +L G P
Sbjct: 190 FAGTPGYLSPEVLKKDP--YSKPVDIWACGVILYILLVGYPPF 230
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 29/156 (18%)
Query: 392 GAVYHGRLNGKNLAIK----RTEHEVITKLEMQLVQHATHHHPNIVRLL---GTCLTDGP 444
GAVY G L+ + +A+K I E + + H NI R + DG
Sbjct: 27 GAVYKGSLDERPVAVKVFSFANRQNFIN--EKNIYRVPLMEHDNIARFIVGDERVTADGR 84
Query: 445 HSFL-VFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM 503
+L V EY NGSL +L + +++SC R+ V L Y+H +
Sbjct: 85 MEYLLVMEYYPNGSLXKYLS---LHTSDWVSSC----------RLAHSVTRGLAYLHTEL 131
Query: 504 ------NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++ SRN+ + + + +FG++
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 86/196 (43%), Gaps = 35/196 (17%)
Query: 398 RLNGKNLAIKRTEH--EVITKL-----EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVF 450
RL G+ +AIK+ + +V+T E+++++H H NI+ + P+
Sbjct: 76 RLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHD--NIIAIKDILRPTVPYG---- 129
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
E+ + D + L +Q I S LT + L+YMH + +HR
Sbjct: 130 EFKSVYVVLDLMESDL---HQIIHSSQP-LTLEHVRYFLYQLLRGLKYMH---SAQVIHR 182
Query: 511 NIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNPAS---------------WSM 555
++K N+ ++E ++G+FGMAR + Q++ T + ++
Sbjct: 183 DLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRAPELMLSLHEYTQ 242
Query: 556 GIDIFAYGIVLLEVLS 571
ID+++ G + E+L+
Sbjct: 243 AIDLWSVGCIFGEMLA 258
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 25/161 (15%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV LL T +DG ++VFE+ L + +K Y S +R
Sbjct: 85 HPHIVELLETYSSDG-MLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQ 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDD------ 539
L+ AL+Y H + + +HR++K N+ L + N+ ++G+FG+A + +
Sbjct: 139 ILE---ALRYCH---DNNIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGG 192
Query: 540 -TESPQFYSTNPAS---WSMGIDIFAYGIVLLEVLSGQTPI 576
+P F + + +D++ G++L +LSG P
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 75/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 48 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 102
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 103 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 147
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G+ P
Sbjct: 148 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/178 (24%), Positives = 76/178 (42%), Gaps = 30/178 (16%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 52 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSKF 106
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 107 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 151
Query: 529 NFGMARCVNDDTESPQFYST---NPASWSMG------IDIFAYGIVLLEVLSGQTPIN 577
+FG + C + T P G +D+++ G++ E L G+ P
Sbjct: 152 DFGWS-CHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 75/155 (48%), Gaps = 23/155 (14%)
Query: 426 THHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQR 485
T H +V+L +T P +++ E+ GSL D+L K Q
Sbjct: 233 TLQHDKLVKL-HAVVTKEP-IYIITEFMAKGSLLDFLKSDEGSK--------------QP 276
Query: 486 LRICLDV-AMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND---DTE 541
L +D A + M + +Y+HR++++ NI + ++ +FG+AR
Sbjct: 277 LPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVGAKFPIKWT 336
Query: 542 SPQFYSTNPASWSMGIDIFAYGIVLLEVLS-GQTP 575
+P+ + N S+++ D++++GI+L+E+++ G+ P
Sbjct: 337 APE--AINFGSFTIKSDVWSFGILLMEIVTYGRIP 369
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/95 (24%), Positives = 54/95 (56%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 159 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR 215
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++M +DI++ G ++ E+L+G+T
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRT 250
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 405 AIKRTEHEVITKLE-MQLVQHATH------HHPNIVRLLGTCLTDGPHSFLVFEYAKNGS 457
A+K + E++ E + VQ H +HP +V L +C F V EY G
Sbjct: 49 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL-HSCFQTESRLFFVIEYVNGGD 107
Query: 458 LKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L + + + A Y ++++AL Y+H ++R++K N+
Sbjct: 108 LMFHMQRQRKLPEEH-ARFYS-----------AEISLALNYLHE---RGIIYRDLKLDNV 152
Query: 518 FLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDIFAYGIV 565
LD E + ++ ++GM + C + +P+ +S +D +A G++
Sbjct: 153 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS--VDWWALGVL 210
Query: 566 LLEVLSGQTPIN 577
+ E+++G++P +
Sbjct: 211 MFEMMAGRSPFD 222
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 55 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSRF 109
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 110 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G P
Sbjct: 155 DFGWSVHAPSSRRTTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNIVRL + + H +LVF D + GG ++ Y S ++
Sbjct: 63 QHPNIVRLHDSIQEESFH-YLVF---------DLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE--- 541
L+ ++ Y H + VHRN+K N+ L + ++ +FG+A VND
Sbjct: 113 QILE---SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
SP+ +P +S +DI+A G++L +L G P
Sbjct: 167 FAGTPGYLSPEVLKKDP--YSKPVDIWACGVILYILLVGYPPF 207
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 74/179 (41%), Gaps = 32/179 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G++ L
Sbjct: 55 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPLGTVYRELQKLSRF 109
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 110 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSNGELKIA 154
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPIN 577
+FG + C D P+ +D+++ G++ E L G P
Sbjct: 155 DFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMH--DEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNIVRL + + H +LVF D + GG ++ Y S ++
Sbjct: 62 QHPNIVRLHDSIQEESFH-YLVF---------DLVTGGELFEDIVAREFYSEADASHCIQ 111
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE--- 541
L+ ++ Y H + VHRN+K N+ L + ++ +FG+A VND
Sbjct: 112 QILE---SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 165
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
SP+ +P +S +DI+A G++L +L G P
Sbjct: 166 FAGTPGYLSPEVLKKDP--YSKPVDIWACGVILYILLVGYPPF 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 71/163 (43%), Gaps = 32/163 (19%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HPNIVRL + + H +LVF D + GG ++ Y S ++
Sbjct: 63 QHPNIVRLHDSIQEESFH-YLVF---------DLVTGGELFEDIVAREFYSEADASHCIQ 112
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE--- 541
L+ ++ Y H + VHRN+K N+ L + ++ +FG+A VND
Sbjct: 113 QILE---SIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHG 166
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
SP+ +P +S +DI+A G++L +L G P
Sbjct: 167 FAGTPGYLSPEVLKKDP--YSKPVDIWACGVILYILLVGYPPF 207
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 28/177 (15%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+RL G D +L+ EYA G + L
Sbjct: 56 VEHQLRREVEIQ----SHLRHPNILRLYG-YFHDATRVYLILEYAPRGEVYKELQKLSKF 110
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ ++T ++A AL Y H + +HR+IK N+ L ++
Sbjct: 111 DEQRTAT---YIT---------ELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIA 155
Query: 529 NFGMARCVNDDTESPQFYSTN--PASWSMG------IDIFAYGIVLLEVLSGQTPIN 577
+FG + + + P G +D+++ G++ E L G+ P
Sbjct: 156 DFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 59
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 60 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 113
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 114 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 59
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 60 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 113
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 114 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 73
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 74 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 123
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 124 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 179 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 117 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 61
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 62 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 115
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 116 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 214
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 63
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 64 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 117
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 118 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 167
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 168 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 216
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 61
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 62 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 115
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 116 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 214
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 59
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 60 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 113
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 114 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 74
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 75 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 124
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES------------------PQ 544
+ HR++K +N+ ++ E ++ +FG+AR + +
Sbjct: 125 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 180 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 81
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 82 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 131
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES------------------PQ 544
+ HR++K +N+ ++ E ++ +FG+AR + +
Sbjct: 132 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 187 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 219
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 24 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 81
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 82 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 131
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 132 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 187 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 219
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 67/147 (45%), Gaps = 24/147 (16%)
Query: 392 GAVYHGRLNG----KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF 447
G VYHGR +G + + I+R + + + +++ + H N+V +G C++ PH
Sbjct: 47 GQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSP-PHLA 105
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
++ K +L + L ++ +I ++ + Y+H
Sbjct: 106 IITSLCKGRTL-----------YSVVRDAKIVLDVNKTRQIAQEIVKGMGYLH---AKGI 151
Query: 508 VHRNIKSRNIFLDEEFNARV--GNFGM 532
+H+++KS+N+F D N +V +FG+
Sbjct: 152 LHKDLKSKNVFYD---NGKVVITDFGL 175
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLF----QLL 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC----------- 535
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 117 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 536 -VNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC----------- 535
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 117 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 536 -VNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 405 AIKRTEHEVITKLE-MQLVQHATH------HHPNIVRLLGTCLTDGPHSFLVFEYAKNGS 457
A+K + E++ E + VQ H +HP +V L +C F V EY G
Sbjct: 34 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL-HSCFQTESRLFFVIEYVNGGD 92
Query: 458 LKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L + + + A Y ++++AL Y+H ++R++K N+
Sbjct: 93 LMFHMQRQRKLPEEH-ARFYS-----------AEISLALNYLHE---RGIIYRDLKLDNV 137
Query: 518 FLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDIFAYGIV 565
LD E + ++ ++GM + C + +P+ +S +D +A G++
Sbjct: 138 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS--VDWWALGVL 195
Query: 566 LLEVLSGQTPIN 577
+ E+++G++P +
Sbjct: 196 MFEMMAGRSPFD 207
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 21 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 78
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 79 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 128
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 129 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 183
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 184 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 216
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 59
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 60 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 113
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 114 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 163
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 164 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 60
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 61 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 114
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 115 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 164
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 213
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 98/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 60
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 61 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 114
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 115 Q-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 213
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 73
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 74 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 123
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 124 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 179 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 74
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 75 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 124
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 125 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 180 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/192 (21%), Positives = 83/192 (43%), Gaps = 37/192 (19%)
Query: 405 AIKRTEHEVITKLE-MQLVQHATH------HHPNIVRLLGTCLTDGPHSFLVFEYAKNGS 457
A+K + E++ E + VQ H +HP +V L +C F V EY G
Sbjct: 38 AMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGL-HSCFQTESRLFFVIEYVNGGD 96
Query: 458 LKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
L + + + A Y ++++AL Y+H ++R++K N+
Sbjct: 97 LMFHMQRQRKLPEEH-ARFYS-----------AEISLALNYLHE---RGIIYRDLKLDNV 141
Query: 518 FLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDIFAYGIV 565
LD E + ++ ++GM + C + +P+ +S +D +A G++
Sbjct: 142 LLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPEILRGEDYGFS--VDWWALGVL 199
Query: 566 LLEVLSGQTPIN 577
+ E+++G++P +
Sbjct: 200 MFEMMAGRSPFD 211
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 73
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 74 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 123
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 124 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 179 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 16 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 73
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 74 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 123
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 124 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 179 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 68/154 (44%), Gaps = 27/154 (17%)
Query: 432 IVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLD 491
+ + G+ L G +++ EY GS D L G + Q IA+ + +
Sbjct: 83 VTKYYGSYLK-GSKLWIIMEYLGGGSALDLLRAGPFDEFQ-IAT------------MLKE 128
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP- 550
+ L Y+H + +HR+IK+ N+ L E+ + ++ +FG+A + D + P
Sbjct: 129 ILKGLDYLH---SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPF 185
Query: 551 ---------ASWSMGIDIFAYGIVLLEVLSGQTP 575
+++ DI++ GI +E+ G+ P
Sbjct: 186 WMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/191 (23%), Positives = 89/191 (46%), Gaps = 35/191 (18%)
Query: 407 KRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGL 466
K TEH T+ E Q+++H P +V L T+ L+ +Y G L + H L
Sbjct: 100 KTTEH---TRTERQVLEH-IRQSPFLVTLHYAFQTE-TKLHLILDYINGGEL--FTH--L 150
Query: 467 AMKNQFIASCYCFLTWSQRLRICL-DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA 525
+ + +F ++I + ++ +AL+++H + ++R+IK NI LD +
Sbjct: 151 SQRERFT---------EHEVQIYVGEIVLALEHLHKL---GIIYRDIKLENILLDSNGHV 198
Query: 526 RVGNFGMAR-CVNDDTE------------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSG 572
+ +FG+++ V D+TE +P + +D ++ G+++ E+L+G
Sbjct: 199 VLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTG 258
Query: 573 QTPINRPRKKD 583
+P +K+
Sbjct: 259 ASPFTVDGEKN 269
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 93/214 (43%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 74
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 75 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 124
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 125 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 180 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 61
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 62 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 115
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K N+ ++ E ++ +FG+AR
Sbjct: 116 Q-----GLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 165
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 166 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 214
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ LH L A L +
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEF---------LHQDLKTFMDASALTGIPLPLIKSY 111
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
L +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 112 LFQLLQGLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHEVITKLEMQLVQ---HATHHHPNIVRLLGTCLTDGPHS 446
G VY + G A K E + +LE +V+ AT HP IV+LLG DG
Sbjct: 33 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-KL 91
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ E+ G++ + + LT Q +C + AL ++H +
Sbjct: 92 WIMIEFCPGGAV-----------DAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKR 137
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGM-ARCVNDDTESPQFYST--------------NPA 551
+HR++K+ N+ + E + R+ +FG+ A+ + + F T
Sbjct: 138 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 197
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTP 575
+ DI++ GI L+E+ + P
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 49/228 (21%)
Query: 382 EKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHH 428
E F +I G VY R L G+ +A+K+ TE E + E+ L++ +
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--N 61
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIV+LL T+ +LVFE+ K L + Y F Q L+
Sbjct: 62 HPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ- 115
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CV 536
+A + H V+ HR++K +N+ ++ E ++ +FG+AR V
Sbjct: 116 ----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV 166
Query: 537 NDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+P+ +YST WS+G IFA + + G + I++
Sbjct: 167 TLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 213
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 60
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 61 -NHPNIVKLLDVIHTEN-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLL 114
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K N+ ++ E ++ +FG+AR
Sbjct: 115 Q-----GLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 213
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 86/204 (42%), Gaps = 35/204 (17%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHEVITKLEMQLVQ---HATHHHPNIVRLLGTCLTDGPHS 446
G VY + G A K E + +LE +V+ AT HP IV+LLG DG
Sbjct: 25 GKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG-KL 83
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+++ E+ G++ + + LT Q +C + AL ++H +
Sbjct: 84 WIMIEFCPGGAV-----------DAIMLELDRGLTEPQIQVVCRQMLEALNFLH---SKR 129
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGM-ARCVNDDTESPQFYST--------------NPA 551
+HR++K+ N+ + E + R+ +FG+ A+ + + F T
Sbjct: 130 IIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDT 189
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTP 575
+ DI++ GI L+E+ + P
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPP 213
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 56 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 115
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 116 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 162
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 163 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 194
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L L D ++V E G L D + + +F + RI
Sbjct: 80 HPNIMKLF-EILEDSSSFYIVGELYTGGELFD----EIIKRKRF--------SEHDAARI 126
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLD---EEFNARVGNFGMARCVNDDTESPQ- 544
V + YMH + VHR++K NI L+ ++ + ++ +FG++ C +T+
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 545 ---FYSTNP----ASWSMGIDIFAYGIVLLEVLSGQTPI 576
Y P ++ D+++ G++L +LSG P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIVRL + +G H +LVF+ G L + + + C
Sbjct: 89 HPNIVRLHDSISEEGFH-YLVFDLVTGGELFEDIVAREYYSEADASHC------------ 135
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE---- 541
+ L+ ++H+ VHR++K N+ L + ++ +FG+A V + +
Sbjct: 136 ---IHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG 192
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
SP+ +P + +DI+A G++L +L G P DE L ++I
Sbjct: 193 FAGTPGYLSPEVLRKDP--YGKPVDIWACGVILYILLVGYPPF-----WDEDQHKLYQQI 245
Query: 594 KS 595
K+
Sbjct: 246 KA 247
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT 185
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 226
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L L D ++V E G L D + + +F + RI
Sbjct: 80 HPNIMKLF-EILEDSSSFYIVGELYTGGELFD----EIIKRKRF--------SEHDAARI 126
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLD---EEFNARVGNFGMARCVNDDTESPQ- 544
V + YMH + VHR++K NI L+ ++ + ++ +FG++ C +T+
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 545 ---FYSTNP----ASWSMGIDIFAYGIVLLEVLSGQTPI 576
Y P ++ D+++ G++L +LSG P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 62
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 63 -NHPNIVKLLDVIHTEN-KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF----QLL 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K N+ ++ E ++ +FG+AR
Sbjct: 117 Q-----GLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 166
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 167 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 215
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+K+ TE E + E+ L++ +HPNIV+LL T+
Sbjct: 17 GVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 74
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L C + H V
Sbjct: 75 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF-QLLQGLSFC--------HSHRV 124
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 125 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 180 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 85/196 (43%), Gaps = 32/196 (16%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
+Y R+ K L + E + E + + A++H P +V L +C F V EY
Sbjct: 79 IYAMRVVKKEL-VNDDEDIDWVQTEKHVFEQASNH-PFLVGL-HSCFQTESRLFFVIEYV 135
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L + + + A Y ++++AL Y+H ++R++K
Sbjct: 136 NGGDLMFHMQRQRKLPEEH-ARFYS-----------AEISLALNYLHE---RGIIYRDLK 180
Query: 514 SRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDIFA 561
N+ LD E + ++ ++GM + C + +P+ +S +D +A
Sbjct: 181 LDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFS--VDWWA 238
Query: 562 YGIVLLEVLSGQTPIN 577
G+++ E+++G++P +
Sbjct: 239 LGVLMFEMMAGRSPFD 254
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/275 (21%), Positives = 112/275 (40%), Gaps = 48/275 (17%)
Query: 335 ASVRTTSDKKVSFEGSQSTIEGQIIDTAEQHKRLLESYSIE----------DLRRATEKF 384
++V TS + + E Q + +D EQ ++ LE++ + D + +E
Sbjct: 20 SAVNGTSSAETNLEALQKKLLELELD--EQQRKRLEAFLTQKQKVGELKDDDFEKISELG 77
Query: 385 NSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----PNIVRLLGTCL 440
+ + V H + +G +A K E+ + Q+++ H P IV G
Sbjct: 78 AGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFY 136
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM- 499
+DG S + E+ GSL L + Q + ++ + V L Y+
Sbjct: 137 SDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSIAVIKGLTYLR 183
Query: 500 --HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTNP------- 550
H +M HR++K NI ++ ++ +FG++ + D + F T
Sbjct: 184 EKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERL 237
Query: 551 --ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKD 583
+S+ DI++ G+ L+E+ G+ PI P K+
Sbjct: 238 QGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 272
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 96/210 (45%), Gaps = 60/210 (28%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHH--------HPNIVRLL------GTCLTDGPHS- 446
K +AIK+ I + Q V+HA H NIV++ G+ LTD S
Sbjct: 37 KRVAIKK-----IVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSL 91
Query: 447 ------FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
++V EY + L + L G ++ A + + Q LR L+Y+H
Sbjct: 92 TELNSVYIVQEYMET-DLANVLEQGPLLEEH--ARLFMY----QLLR-------GLKYIH 137
Query: 501 HVMNPSYVHRNIKSRNIFLD-EEFNARVGNFGMARCVNDDT---------------ESPQ 544
+ + +HR++K N+F++ E+ ++G+FG+AR ++ SP+
Sbjct: 138 ---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPR 194
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQT 574
+P +++ ID++A G + E+L+G+T
Sbjct: 195 LL-LSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNAMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ + GSL D+L G + +TW++ + ++ L Y+H +
Sbjct: 89 WLITAFHDKGSLTDYLKGNI-------------ITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 504 -----NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
PS HR+ KS+N+ L + A + +FG+A
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLA 170
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 380 ATEKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHAT 426
+ E F +I G VY R L G+ +A+K+ TE E + E+ L++
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL- 60
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
+HPNIV+LL T+ +LVFE+ K L + Y F Q L
Sbjct: 61 -NHPNIVKLLDVIHTEN-KLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLF----QLL 114
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------ 534
+ +A + H V+ HR++K N+ ++ E ++ +FG+AR
Sbjct: 115 Q-----GLAFCHSHRVL-----HRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHE 164
Query: 535 CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 165 VVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 213
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/182 (23%), Positives = 74/182 (40%), Gaps = 38/182 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIVRL + +G H +L+F+ G L + + + C
Sbjct: 69 HPNIVRLHDSISEEG-HHYLIFDLVTGGELFEDIVAREYYSEADASHC------------ 115
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE---- 541
+ L+ + H VHRN+K N+ L + ++ +FG+A V + +
Sbjct: 116 ---IQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 172
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
SP+ +P + +D++A G++L +L G P DE L ++I
Sbjct: 173 FAGTPGYLSPEVLRKDP--YGKPVDLWACGVILYILLVGYPPF-----WDEDQHRLYQQI 225
Query: 594 KS 595
K+
Sbjct: 226 KA 227
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HHPNIV T +LV + GS+ D + +A K + + T + LR
Sbjct: 71 HHPNIVSYY-TSFVVKDELWLVMKLLSGGSVLDIIKHIVA-KGEHKSGVLDESTIATILR 128
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC------VNDDTE 541
L+ L+Y+H +HR++K+ NI L E+ + ++ +FG++ + +
Sbjct: 129 EVLE---GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 182
Query: 542 SPQFYST----------NPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
F T + DI+++GI +E+ +G P ++
Sbjct: 183 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 205
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 246
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 226
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 27/159 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNI++L L D ++V E G L D + + +F + RI
Sbjct: 80 HPNIMKLF-EILEDSSSFYIVGELYTGGELFD----EIIKRKRF--------SEHDAARI 126
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLD---EEFNARVGNFGMARCVNDDTESPQ- 544
V + YMH + VHR++K NI L+ ++ + ++ +FG++ C +T+
Sbjct: 127 IKQVFSGITYMH---KHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR 183
Query: 545 ---FYSTNP----ASWSMGIDIFAYGIVLLEVLSGQTPI 576
Y P ++ D+++ G++L +LSG P
Sbjct: 184 IGTAYYIAPEVLRGTYDEKCDVWSAGVILYILLSGTPPF 222
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 43 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 102
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 103 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 149
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 150 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 181
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 141 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 197
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 135 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 191
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 102/232 (43%), Gaps = 57/232 (24%)
Query: 382 EKFNSSNRI----EGAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHH 428
E F +I G VY R L G+ +A+K+ TE E + E+ L++ +
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL--N 59
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG----GLAMKNQFIASCYCFLTWSQ 484
HPNIV+LL T+ +LVFE+ LK ++ G+ + + Y F Q
Sbjct: 60 HPNIVKLLDVIHTEN-KLYLVFEHVHQ-DLKTFMDASALTGIPLP---LIKSYLF----Q 110
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR---------- 534
L+ +A + H V+ HR++K +N+ ++ E ++ +FG+AR
Sbjct: 111 LLQ-----GLAFCHSHRVL-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYT 160
Query: 535 --CVNDDTESPQ------FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
V +P+ +YST WS+G IFA + + G + I++
Sbjct: 161 HEVVTLWYRAPEILLGCKYYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 130 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATR 186
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 72/167 (43%), Gaps = 24/167 (14%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
HHPNIV T +LV + GS+ D + +A K + + T + LR
Sbjct: 66 HHPNIVSYY-TSFVVKDELWLVMKLLSGGSVLDIIKHIVA-KGEHKSGVLDESTIATILR 123
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC------VNDDTE 541
L+ L+Y+H +HR++K+ NI L E+ + ++ +FG++ + +
Sbjct: 124 EVLE---GLEYLH---KNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKV 177
Query: 542 SPQFYST----------NPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
F T + DI+++GI +E+ +G P ++
Sbjct: 178 RKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHK 224
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLT 185
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 226
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 95/230 (41%), Gaps = 36/230 (15%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D R +E + + V H R +G +A K E+ + Q+++ H P
Sbjct: 16 DDFERISELGAGNGGVVTKVQH-RPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSP 74
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + + + ++ +
Sbjct: 75 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKEAKRIPEEILG------------KVSI 121
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 122 AVLRGLAYLREKHQIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 175
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVW 588
T +S+ DI++ G+ L+E+ G+ PI P K+ +++
Sbjct: 176 TRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIF 225
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
VY +L K IKR++ + E ++ A + P +V+L D + ++V EY
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWE-ERDIMAFA--NSPWVVQLF-YAFQDDRYLYMVMEYM 156
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L + M N + W++ +V +AL +H + ++HR++K
Sbjct: 157 PGGDLVN------LMSNYDVPE-----KWARFY--TAEVVLALDAIHSM---GFIHRDVK 200
Query: 514 SRNIFLDEEFNARVGNF---------GMARCVND----DTESPQFYSTNPASWSMG--ID 558
N+ LD+ + ++ +F GM RC D SP+ + G D
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 559 IFAYGIVLLEVLSGQTPI 576
++ G+ L E+L G TP
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 190
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 231
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 40/202 (19%)
Query: 393 AVYHGRLNGKNLAIKRTE-------HEVITKLEMQLVQHATHHHPNIVRLL-----GTCL 440
+ Y RL K +A+K+ H T E++L++H H N++ LL T +
Sbjct: 46 SAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE--NVIGLLDVFTPATSI 102
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
D +LV L + +K+Q ++ + Q LR L+Y+H
Sbjct: 103 EDFSEVYLVTTLM-GADLNN------IVKSQALSDEHVQFLVYQLLR-------GLKYIH 148
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST-----NPAS 552
+ +HR++K N+ ++E+ R+ +FG+AR +++ + ++Y N
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 553 WSMGIDIFAYGIVLLEVLSGQT 574
++ +DI++ G ++ E+L G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKA 227
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 132 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 191
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 232
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 123 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 182
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 223
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLT 187
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 228
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 134 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 193
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 194 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 234
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 226
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 224
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 228
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 124 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 183
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 224
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 128 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 187
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 188 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 228
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
VY +L K IKR++ + E ++ A + P +V+L D + ++V EY
Sbjct: 96 VYAMKLLSKFEMIKRSDSAFFWE-ERDIMAFA--NSPWVVQLF-YAFQDDRYLYMVMEYM 151
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L + M N + W++ +V +AL +H + ++HR++K
Sbjct: 152 PGGDLVN------LMSNYDVPE-----KWARFY--TAEVVLALDAIHSM---GFIHRDVK 195
Query: 514 SRNIFLDEEFNARVGNF---------GMARCVND----DTESPQFYSTNPASWSMG--ID 558
N+ LD+ + ++ +F GM RC D SP+ + G D
Sbjct: 196 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 255
Query: 559 IFAYGIVLLEVLSGQTPI 576
++ G+ L E+L G TP
Sbjct: 256 WWSVGVFLYEMLVGDTPF 273
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 18 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 77
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 78 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 124
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 125 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 156
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 205
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 246
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 84/198 (42%), Gaps = 35/198 (17%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
VY +L K IKR++ + E ++ A + P +V+L D + ++V EY
Sbjct: 101 VYAMKLLSKFEMIKRSDSAFFWE-ERDIMAFA--NSPWVVQLF-YAFQDDRYLYMVMEYM 156
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L + M N + W++ +V +AL +H + ++HR++K
Sbjct: 157 PGGDLVN------LMSNYDVPE-----KWARFY--TAEVVLALDAIHSM---GFIHRDVK 200
Query: 514 SRNIFLDEEFNARVGNF---------GMARCVND----DTESPQFYSTNPASWSMG--ID 558
N+ LD+ + ++ +F GM RC D SP+ + G D
Sbjct: 201 PDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECD 260
Query: 559 IFAYGIVLLEVLSGQTPI 576
++ G+ L E+L G TP
Sbjct: 261 WWSVGVFLYEMLVGDTPF 278
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F +
Sbjct: 126 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLT 185
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 186 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 226
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 23 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 82
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 83 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 129
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 130 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 161
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 20 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 79
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 80 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 126
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 127 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 158
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 68/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDG---PHS 446
G V+ G+ G+ +A+K + E E ++ Q H NI+ + D
Sbjct: 17 GEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQL 76
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+LV +Y ++GSL D+L N++ + + ++ L A L ++H +
Sbjct: 77 WLVSDYHEHGSLFDYL-------NRYTVTVEGMI------KLALSTASGLAHLHMEIVGT 123
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR++KS+NI + + + + G+A
Sbjct: 124 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLA 155
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN- 549
++ + L++MH N V+R++K NI LDE + R+ + G+A C + T+
Sbjct: 300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHG 355
Query: 550 ---PASWSMGI------DIFAYGIVLLEVLSGQTPINRPRKKDEGSV 587
P G+ D F+ G +L ++L G +P + + KD+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN- 549
++ + L++MH N V+R++K NI LDE + R+ + G+A C + T+
Sbjct: 300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHG 355
Query: 550 ---PASWSMGI------DIFAYGIVLLEVLSGQTPINRPRKKDEGSV 587
P G+ D F+ G +L ++L G +P + + KD+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 136 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 192
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/95 (23%), Positives = 53/95 (55%), Gaps = 11/95 (11%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQ 544
+ + L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + +
Sbjct: 132 LIYQILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATR 188
Query: 545 FYST-----NPASWSMGIDIFAYGIVLLEVLSGQT 574
+Y N ++ +DI++ G ++ E+L+G+T
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRA 210
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 39/178 (21%), Positives = 70/178 (39%), Gaps = 40/178 (22%)
Query: 429 HPNIVRLLGT---CLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQR 485
H NI++ +G + +L+ + + GSL D+L + ++W++
Sbjct: 77 HENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-------------VSWNEL 123
Query: 486 LRICLDVAMALQYMHHVM-------NPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
I +A L Y+H + P+ HR+IKS+N+ L A + +FG+A
Sbjct: 124 CHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEA 183
Query: 539 DTESPQFYSTNPASWSMG-----------------IDIFAYGIVLLEVLSGQTPINRP 579
+ + M ID++A G+VL E+ S T + P
Sbjct: 184 GKSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP 241
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 133 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 189
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 190 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 145 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 201
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 202 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 146 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 202
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 203 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN- 549
++ + L++MH N V+R++K NI LDE + R+ + G+A C + T+
Sbjct: 300 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHG 355
Query: 550 ---PASWSMGI------DIFAYGIVLLEVLSGQTPINRPRKKDEGSV 587
P G+ D F+ G +L ++L G +P + + KD+ +
Sbjct: 356 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 197
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 153 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 209
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 210 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 140 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 196
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 197 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 139 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 195
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 196 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 213
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 52/107 (48%), Gaps = 14/107 (13%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN- 549
++ + L++MH N V+R++K NI LDE + R+ + G+A C + T+
Sbjct: 299 EIILGLEHMH---NRFVVYRDLKPANILLDEHGHVRISDLGLA-CDFSKKKPHASVGTHG 354
Query: 550 ---PASWSMGI------DIFAYGIVLLEVLSGQTPINRPRKKDEGSV 587
P G+ D F+ G +L ++L G +P + + KD+ +
Sbjct: 355 YMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 144 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 200
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 201 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 231
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 157 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRA 213
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 214 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 131 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 187
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 188 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 218
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 90/196 (45%), Gaps = 36/196 (18%)
Query: 397 GRLNGKNLAIKRTEHEVITKL-------EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
GR G +AIK+ ++L E++L++H H N++ LL
Sbjct: 47 GR-TGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE--NVIGLLDV----------- 92
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL---RICLDVAMALQYMHHVMNPS 506
+ + +L D+ L M F+ + L ++L RI V L+ + ++
Sbjct: 93 --FTPDETLDDFTDFYLVMP--FMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIHAAG 148
Query: 507 YVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES---PQFYST-----NPASWSMGID 558
+HR++K N+ ++E+ ++ +FG+AR + + ++Y N ++ +D
Sbjct: 149 IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVD 208
Query: 559 IFAYGIVLLEVLSGQT 574
I++ G ++ E+++G+T
Sbjct: 209 IWSVGCIMAEMITGKT 224
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 132 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 188
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 189 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 136 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 192
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 193 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRA 186
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 154 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 210
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 211 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 130 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 186
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 187 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 217
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 42.4 bits (98), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F
Sbjct: 130 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 189
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 230
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 51/106 (48%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ L+ + ++ +FG+AR + D + F
Sbjct: 131 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLX 190
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 231
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/214 (21%), Positives = 88/214 (41%), Gaps = 32/214 (14%)
Query: 392 GAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
G +Y ++ K++ ++ + E T E +++ A +HP + +L C F V E
Sbjct: 48 GDLYAVKVLKKDVILQDDDVEC-TMTEKRILSLA-RNHPFLTQLF-CCFQTPDRLFFVME 104
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
+ G L H I F R ++ AL ++H + ++R+
Sbjct: 105 FVNGGDLM--FH---------IQKSRRFDEARARF-YAAEIISALMFLH---DKGIIYRD 149
Query: 512 IKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGIDI 559
+K N+ LD E + ++ +FGM + C D +P+ + +D
Sbjct: 150 LKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPDYIAPEILQE--MLYGPAVDW 207
Query: 560 FAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
+A G++L E+L G P + D L++++
Sbjct: 208 WAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEV 241
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIVRL + +G H +LVF+ G L + + + C
Sbjct: 62 HPNIVRLHDSISEEGFH-YLVFDLVTGGELFEDIVAREYYSEADASHC------------ 108
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE---- 541
+ L+ ++H VHR++K N+ L + ++ +FG+A V D +
Sbjct: 109 ---IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
SP+ +P + +D++A G++L +L G P DE L ++I
Sbjct: 166 FAGTPGYLSPEVLRKDP--YGKPVDMWACGVILYILLVGYPPF-----WDEDQHRLYQQI 218
Query: 594 KS 595
K+
Sbjct: 219 KA 220
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/161 (22%), Positives = 68/161 (42%), Gaps = 24/161 (14%)
Query: 392 GAVYHGRLNGKNLAIKR--TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLT---DGPHS 446
G V+ G+ G+ +A+K T E E ++ Q H NI+ + +
Sbjct: 51 GEVWMGKWRGEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQL 110
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ +Y +NGSL D+L L L++ L ++H +
Sbjct: 111 YLITDYHENGSLYDYLKS-------------TTLDAKSMLKLAYSSVSGLCHLHTEIFST 157
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA-RCVNDDTE 541
P+ HR++KS+NI + + + + G+A + ++D E
Sbjct: 158 QGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNE 198
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 400 NGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
G+ A+K EVI T E +++Q+ HP + L T F V E
Sbjct: 32 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-VME 88
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYVHR 510
YA G L + H L+ + F +R R ++ AL+Y+H + V+R
Sbjct: 89 YANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVVYR 132
Query: 511 NIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGID 558
+IK N+ LD++ + ++ +FG+ + C + +P+ N + +D
Sbjct: 133 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVD 190
Query: 559 IFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
+ G+V+ E++ G+ P + + L E+I+
Sbjct: 191 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 226
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 76/182 (41%), Gaps = 38/182 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIVRL + +G H +L+F D + GG ++ Y S ++
Sbjct: 80 HPNIVRLHDSISEEG-HHYLIF---------DLVTGGELFEDIVAREYYSEADASHCIQQ 129
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE---- 541
L+ + H VHR++K N+ L + ++ +FG+A V + +
Sbjct: 130 ILEAVL------HCHQMGVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG 183
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
SP+ +P + +D++A G++L +L G P DE L ++I
Sbjct: 184 FAGTPGYLSPEVLRKDP--YGKPVDLWACGVILYILLVGYPPF-----WDEDQHRLYQQI 236
Query: 594 KS 595
K+
Sbjct: 237 KA 238
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+ + TE E + E+ L++ +HPNIV+LL T+
Sbjct: 17 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 74
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 75 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 124
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 125 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 180 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 212
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 45/214 (21%)
Query: 392 GAVYHGR--LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGTCLTD 442
G VY R L G+ +A+ + TE E + E+ L++ +HPNIV+LL T+
Sbjct: 16 GVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKEL--NHPNIVKLLDVIHTE 73
Query: 443 GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHV 502
+LVFE+ K L + Y F Q L+ +A + H V
Sbjct: 74 N-KLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLF----QLLQ-----GLAFCHSHRV 123
Query: 503 MNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQ------ 544
+ HR++K +N+ ++ E ++ +FG+AR V +P+
Sbjct: 124 L-----HRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+YST WS+G IFA + + G + I++
Sbjct: 179 YYSTAVDIWSLGC-IFAEMVTRRALFPGDSEIDQ 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/251 (21%), Positives = 102/251 (40%), Gaps = 46/251 (18%)
Query: 359 IDTAEQHKRLLESYSIE----------DLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKR 408
++ EQ ++ LE++ + D + +E + + V H + +G +A K
Sbjct: 7 LELDEQQRKRLEAFLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSH-KPSGLVMARKL 65
Query: 409 TEHEVITKLEMQLVQHATHHH----PNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHG 464
E+ + Q+++ H P IV G +DG S + E+ GSL L
Sbjct: 66 IHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKK 124
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYM---HHVMNPSYVHRNIKSRNIFLDE 521
+ Q + ++ + V L Y+ H +M HR++K NI ++
Sbjct: 125 AGRIPEQILG------------KVSIAVIKGLTYLREKHKIM-----HRDVKPSNILVNS 167
Query: 522 EFNARVGNFGMARCVNDDTESPQFYSTNP---------ASWSMGIDIFAYGIVLLEVLSG 572
++ +FG++ + D + F T +S+ DI++ G+ L+E+ G
Sbjct: 168 RGEIKLCDFGVSGQLIDSMAN-SFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Query: 573 QTPINRPRKKD 583
+ PI P K+
Sbjct: 227 RYPIPPPDAKE 237
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 400 NGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
G+ A+K EVI T E +++Q+ HP + L T F V E
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-VME 85
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYVHR 510
YA G L + H L+ + F +R R ++ AL+Y+H + V+R
Sbjct: 86 YANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVVYR 129
Query: 511 NIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGID 558
+IK N+ LD++ + ++ +FG+ + C + +P+ N + +D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRAVD 187
Query: 559 IFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
+ G+V+ E++ G+ P + + L E+I+
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 93/218 (42%), Gaps = 42/218 (19%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K EVI T E +++Q+ HP + L T F V
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-V 83
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYV 508
EYA G L + H L+ + F +R R ++ AL+Y+H + V
Sbjct: 84 MEYANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVV 127
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMG 556
+R+IK N+ LD++ + ++ +FG+ + C + +P+ N +
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPEYLAPEVLEDN--DYGRA 185
Query: 557 IDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
+D + G+V+ E++ G+ P + + L E+I+
Sbjct: 186 VDWWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 400 NGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
G+ A+K EVI T E +++Q+ HP + L T F V E
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-VME 85
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYVHR 510
YA G L + H L+ + F +R R ++ AL+Y+H + V+R
Sbjct: 86 YANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVVYR 129
Query: 511 NIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGID 558
+IK N+ LD++ + ++ +FG+ + C + +P+ N + +D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVD 187
Query: 559 IFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
+ G+V+ E++ G+ P + + L E+I+
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 92/216 (42%), Gaps = 42/216 (19%)
Query: 400 NGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE 451
G+ A+K EVI T E +++Q+ HP + L T F V E
Sbjct: 29 TGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-VME 85
Query: 452 YAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYVHR 510
YA G L + H L+ + F +R R ++ AL+Y+H + V+R
Sbjct: 86 YANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVVYR 129
Query: 511 NIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGID 558
+IK N+ LD++ + ++ +FG+ + C + +P+ N + +D
Sbjct: 130 DIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRAVD 187
Query: 559 IFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
+ G+V+ E++ G+ P + + L E+I+
Sbjct: 188 WWGLGVVMYEMMCGRLPFYNQDHERLFELILMEEIR 223
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/196 (20%), Positives = 81/196 (41%), Gaps = 46/196 (23%)
Query: 401 GKNLAIKR----TEHEVITKLEMQLVQHATH-HHPNIVRLLGTCLTDGPHSFLVFEYAKN 455
G+ +AIK+ + +++ K+ M+ ++ H N+V LL C +LVFE+ +
Sbjct: 50 GRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC-KKKKRWYLVFEFVDH 108
Query: 456 GSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNP-------SYV 508
L D + LD + +Y+ ++N + +
Sbjct: 109 TILDDL----------------------ELFPNGLDYQVVQKYLFQIINGIGFCHSHNII 146
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMARC------VNDDTESPQFYS-----TNPASWSMGI 557
HR+IK NI + + ++ +FG AR V DD + ++Y + +
Sbjct: 147 HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAV 206
Query: 558 DIFAYGIVLLEVLSGQ 573
D++A G ++ E+ G+
Sbjct: 207 DVWAIGCLVTEMFMGE 222
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ FG+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+R+ D +L+ E+A G L L
Sbjct: 57 VEHQLRREIEIQ----SHLRHPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQKHGRF 111
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ F+ ++A AL Y H +HR+IK N+ + + ++
Sbjct: 112 DEQRSAT---FME---------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIA 156
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+FG + C D P+ + +D++ G++ E L G P +
Sbjct: 157 DFGWSVHAPSLRRRXMCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVGMPPFDS 214
Query: 579 P 579
P
Sbjct: 215 P 215
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 75/182 (41%), Gaps = 38/182 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HPNIVRL + +G H +LVF+ G L + + + C
Sbjct: 62 HPNIVRLHDSISEEGFH-YLVFDLVTGGELFEDIVAREYYSEADASHC------------ 108
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTE---- 541
+ L+ ++H VHR++K N+ L + ++ +FG+A V D +
Sbjct: 109 ---IQQILESVNHCHLNGIVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKI 593
SP+ +P + +D++A G++L +L G P DE L ++I
Sbjct: 166 FAGTPGYLSPEVLRKDP--YGKPVDMWACGVILYILLVGYPPF-----WDEDQHRLYQQI 218
Query: 594 KS 595
K+
Sbjct: 219 KA 220
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/226 (21%), Positives = 93/226 (41%), Gaps = 36/226 (15%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 65 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 111
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 112 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 165
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDE 584
T +S+ DI++ G+ L+E+ G+ PI P K++
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKED 211
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K EVI T E +++Q+ HP + L T F V
Sbjct: 27 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-V 83
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYV 508
EYA G L + H L+ + F +R R ++ AL+Y+H + V
Sbjct: 84 MEYANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVV 127
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMG 556
+R+IK N+ LD++ + ++ +FG+ + C + +P+ N +
Sbjct: 128 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRA 185
Query: 557 IDIFAYGIVLLEVLSGQTPI 576
+D + G+V+ E++ G+ P
Sbjct: 186 VDWWGLGVVMYEMMCGRLPF 205
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 71/178 (39%), Gaps = 50/178 (28%)
Query: 429 HPNIVRLLGTCLTDGPHS-FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
H NIV LL D +LVF+Y + LH + L +
Sbjct: 68 HENIVNLLNVLRADNDRDVYLVFDYMETD-----LHAVIRAN---------ILEPVHKQY 113
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR------------- 534
+ + ++Y+H + +HR++K NI L+ E + +V +FG++R
Sbjct: 114 VVYQLIKVIKYLH---SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIP 170
Query: 535 -CVNDDTES-----PQFYSTNPASW-------------SMGIDIFAYGIVLLEVLSGQ 573
+N++TE+ P W + GID+++ G +L E+L G+
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 86/200 (43%), Gaps = 42/200 (21%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K EVI T E +++Q+ HP + L T F V
Sbjct: 32 KATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNT--RHPFLTALKYAFQTHDRLCF-V 88
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRIC-LDVAMALQYMHHVMNPSYV 508
EYA G L + H L+ + F +R R ++ AL+Y+H + V
Sbjct: 89 MEYANGGEL--FFH--LSRERVFT---------EERARFYGAEIVSALEYLH---SRDVV 132
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMG 556
+R+IK N+ LD++ + ++ +FG+ + C + +P+ N +
Sbjct: 133 YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPEYLAPEVLEDN--DYGRA 190
Query: 557 IDIFAYGIVLLEVLSGQTPI 576
+D + G+V+ E++ G+ P
Sbjct: 191 VDWWGLGVVMYEMMCGRLPF 210
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 70/159 (44%), Gaps = 22/159 (13%)
Query: 428 HHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
+HPN+++ + + D + +V E A G L + K W ++
Sbjct: 90 NHPNVIKYYASFIEDNELN-IVLELADAGDLSRMIKHFKKQKRLIPERT----VWKYFVQ 144
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------ 541
+C AL++MH + +HR+IK N+F+ ++G+ G+ R + T
Sbjct: 145 LC----SALEHMH---SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV 197
Query: 542 -SPQFYS---TNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+P + S + ++ DI++ G +L E+ + Q+P
Sbjct: 198 GTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+R+ D +L+ E+A G L L
Sbjct: 57 VEHQLRREIEIQ----SHLRHPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQKHGRF 111
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ F+ ++A AL Y H +HR+IK N+ + + ++
Sbjct: 112 DEQRSAT---FME---------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIA 156
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+FG + C D P+ + +D++ G++ E L G P +
Sbjct: 157 DFGWSVHAPSLRRRXMCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVGMPPFDS 214
Query: 579 P 579
P
Sbjct: 215 P 215
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
EH++ ++E+Q + HPNI+R+ D +L+ E+A G L L
Sbjct: 58 VEHQLRREIEIQ----SHLRHPNILRMY-NYFHDRKRIYLMLEFAPRGELYKELQKHGRF 112
Query: 469 KNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVG 528
Q A+ F+ ++A AL Y H +HR+IK N+ + + ++
Sbjct: 113 DEQRSAT---FME---------ELADALHYCH---ERKVIHRDIKPENLLMGYKGELKIA 157
Query: 529 NFGMA----------RCVNDDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+FG + C D P+ + +D++ G++ E L G P +
Sbjct: 158 DFGWSVHAPSLRRRXMCGTLDYLPPEMIEGK--THDEKVDLWCAGVLCYEFLVGMPPFDS 215
Query: 579 P 579
P
Sbjct: 216 P 216
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/152 (21%), Positives = 64/152 (42%), Gaps = 19/152 (12%)
Query: 438 TC---LTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAM 494
TC +T+ ++++EY +N S+ + + + CF+ I V
Sbjct: 107 TCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYT----CFIPIQVIKCIIKSVLN 162
Query: 495 ALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND----------DTESPQ 544
+ Y+H+ N HR++K NI +D+ ++ +FG + + D + P+
Sbjct: 163 SFSYIHNEKNI--CHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEFMPPE 220
Query: 545 FYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
F+S + +DI++ GI L + P
Sbjct: 221 FFSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 91/206 (44%), Gaps = 39/206 (18%)
Query: 398 RLNGKNLAIK---------RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFL 448
++ G+ A+K +T+ E + + E+QL++ H PNI++L D + +L
Sbjct: 54 KITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLDH--PNIMKLY-EFFEDKGYFYL 109
Query: 449 VFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYV 508
V E G L D + + +F + RI V + YMH V
Sbjct: 110 VGEVYTGGELFD----EIISRKRF--------SEVDAARIIRQVLSGITYMH---KNKIV 154
Query: 509 HRNIKSRNIFLD---EEFNARVGNFGMA------RCVNDDTESPQFYSTNP--ASWSMGI 557
HR++K N+ L+ ++ N R+ +FG++ + + D + + + ++
Sbjct: 155 HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKC 214
Query: 558 DIFAYGIVLLEVLSGQTPINRPRKKD 583
D+++ G++L +LSG P N + D
Sbjct: 215 DVWSTGVILYILLSGCPPFNGANEYD 240
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV LL T +DG ++VFE+ L + +K Y S +R
Sbjct: 87 HPHIVELLETYSSDG-MLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQ 140
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDD------ 539
L+ AL+Y H + + +HR++K + L + N+ ++G FG+A + +
Sbjct: 141 ILE---ALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 194
Query: 540 -TESPQFYSTNPAS---WSMGIDIFAYGIVLLEVLSGQTPI 576
+P F + + +D++ G++L +LSG P
Sbjct: 195 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR D+ + ++Y
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR D+ + ++Y
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 65 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 111
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 112 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 165
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKD 583
T +S+ DI++ G+ L+E+ G+ PI P K+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/91 (24%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+AR D+ + ++Y
Sbjct: 141 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRA 197
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 198 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 228
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 52/91 (57%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ ++G+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 40/202 (19%)
Query: 393 AVYHGRLNGKNLAIKRTE-------HEVITKLEMQLVQHATHHHPNIVRLL-----GTCL 440
+ Y RL K +A+K+ H T E++L++H H N++ LL T +
Sbjct: 46 SAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE--NVIGLLDVFTPATSI 102
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
D +LV L + +K Q ++ + Q LR L+Y+H
Sbjct: 103 EDFSEVYLVTTLM-GADLNN------IVKCQALSDEHVQFLVYQLLR-------GLKYIH 148
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST-----NPAS 552
+ +HR++K N+ ++E+ R+ +FG+AR +++ + ++Y N
Sbjct: 149 ---SAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMH 205
Query: 553 WSMGIDIFAYGIVLLEVLSGQT 574
++ +DI++ G ++ E+L G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGKA 227
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 65 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 111
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 112 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 165
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKD 583
T +S+ DI++ G+ L+E+ G+ PI P K+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 407 KRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGL 466
++T+ E + + E+QL++ H PNI++L D + +LV E G L D +
Sbjct: 89 QKTDKESLLR-EVQLLKQLDH--PNIMKLY-EFFEDKGYFYLVGEVYTGGELFD----EI 140
Query: 467 AMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLD---EEF 523
+ +F + RI V + YMH VHR++K N+ L+ ++
Sbjct: 141 ISRKRF--------SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 189
Query: 524 NARVGNFGMA------RCVNDDTESPQFYSTNP--ASWSMGIDIFAYGIVLLEVLSGQTP 575
N R+ +FG++ + + D + + + ++ D+++ G++L +LSG P
Sbjct: 190 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 249
Query: 576 INRPRKKD 583
N + D
Sbjct: 250 FNGANEYD 257
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 85/188 (45%), Gaps = 30/188 (15%)
Query: 407 KRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGL 466
++T+ E + + E+QL++ H PNI++L D + +LV E G L D +
Sbjct: 90 QKTDKESLLR-EVQLLKQLDH--PNIMKLY-EFFEDKGYFYLVGEVYTGGELFD----EI 141
Query: 467 AMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLD---EEF 523
+ +F + RI V + YMH VHR++K N+ L+ ++
Sbjct: 142 ISRKRF--------SEVDAARIIRQVLSGITYMH---KNKIVHRDLKPENLLLESKSKDA 190
Query: 524 NARVGNFGMA------RCVNDDTESPQFYSTNP--ASWSMGIDIFAYGIVLLEVLSGQTP 575
N R+ +FG++ + + D + + + ++ D+++ G++L +LSG P
Sbjct: 191 NIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEKCDVWSTGVILYILLSGCPP 250
Query: 576 INRPRKKD 583
N + D
Sbjct: 251 FNGANEYD 258
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 91/202 (45%), Gaps = 40/202 (19%)
Query: 393 AVYHGRLNGKNLAIKRTE-------HEVITKLEMQLVQHATHHHPNIVRLL-----GTCL 440
+ Y RL K +A+K+ H T E++L++H H N++ LL T +
Sbjct: 38 SAYDARLRQK-VAVKKLSRPFQSLIHARRTYRELRLLKHLKHE--NVIGLLDVFTPATSI 94
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
D +LV L + +K Q ++ + Q LR L+Y+H
Sbjct: 95 EDFSEVYLVTTLM-GADLNN------IVKCQALSDEHVQFLVYQLLR-------GLKYIH 140
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST-----NPAS 552
+ +HR++K N+ ++E+ R+ +FG+AR +++ + ++Y N
Sbjct: 141 ---SAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMH 197
Query: 553 WSMGIDIFAYGIVLLEVLSGQT 574
++ +DI++ G ++ E+L G+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGKA 219
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 72/161 (44%), Gaps = 25/161 (15%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
HP+IV LL T +DG ++VFE+ L + +K Y S +R
Sbjct: 85 HPHIVELLETYSSDG-MLYMVFEFMDGADLCFEI-----VKRADAGFVYSEAVASHYMRQ 138
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDD------ 539
L+ AL+Y H + + +HR++K + L + N+ ++G FG+A + +
Sbjct: 139 ILE---ALRYCH---DNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGG 192
Query: 540 -TESPQFYSTNPAS---WSMGIDIFAYGIVLLEVLSGQTPI 576
+P F + + +D++ G++L +LSG P
Sbjct: 193 RVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/207 (22%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 388 NRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF 447
++I G ++ K ++T+ E + + E+QL++ H PNI++L D + +
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLDH--PNIMKLY-EFFEDKGYFY 102
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
LV E G L D + + +F + RI V + YMH
Sbjct: 103 LVGEVYTGGELFD----EIISRKRF--------SEVDAARIIRQVLSGITYMH---KNKI 147
Query: 508 VHRNIKSRNIFLD---EEFNARVGNFGMA------RCVNDDTESPQFYSTNP--ASWSMG 556
VHR++K N+ L+ ++ N R+ +FG++ + + D + + + ++
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYDEK 207
Query: 557 IDIFAYGIVLLEVLSGQTPINRPRKKD 583
D+++ G++L +LSG P N + D
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEYD 234
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K + EVI T E +++Q++ HP + L + T F V
Sbjct: 30 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTALKYSFQTHDRLCF-V 86
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
EYA G L + H L+ + F F ++ AL Y+H N V+
Sbjct: 87 MEYANGGEL--FFH--LSRERVFSEDRARFYG--------AEIVSALDYLHSEKN--VVY 132
Query: 510 RNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGI 557
R++K N+ LD++ + ++ +FG+ + C + +P+ N + +
Sbjct: 133 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAV 190
Query: 558 DIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
D + G+V+ E++ G+ P + + L E+I+
Sbjct: 191 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 227
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/182 (20%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 402 KNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
K + +K+ EH + K +Q V + P +V+L D + ++V EY G +
Sbjct: 65 KVVKLKQIEHTLNEKRILQAV-----NFPFLVKL-EFSFKDNSNLYMVMEYVAGGEM--- 115
Query: 462 LHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
L +F F + + +Y+H + ++R++K N+ +DE
Sbjct: 116 -FSHLRRIGRFSEPHARFY--------AAQIVLTFEYLHSL---DLIYRDLKPENLLIDE 163
Query: 522 EFNARVGNFGMARCVNDDTE----SPQFYSTN---PASWSMGIDIFAYGIVLLEVLSGQT 574
+ +V +FG A+ V T +P++ + ++ +D +A G+++ E+ +G
Sbjct: 164 QGYIQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYP 223
Query: 575 PI 576
P
Sbjct: 224 PF 225
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K + EVI T E +++Q++ HP + L + T F V
Sbjct: 32 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTALKYSFQTHDRLCF-V 88
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
EYA G L + H L+ + F F ++ AL Y+H N V+
Sbjct: 89 MEYANGGEL--FFH--LSRERVFSEDRARFYG--------AEIVSALDYLHSEKN--VVY 134
Query: 510 RNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGI 557
R++K N+ LD++ + ++ +FG+ + C + +P+ N + +
Sbjct: 135 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAV 192
Query: 558 DIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
D + G+V+ E++ G+ P + + L E+I+
Sbjct: 193 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 229
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K + EVI T E +++Q++ HP + L + T F V
Sbjct: 173 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTALKYSFQTHDRLCF-V 229
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
EYA G L + H L+ + F F ++ AL Y+H N V+
Sbjct: 230 MEYANGGEL--FFH--LSRERVFSEDRARFY--------GAEIVSALDYLHSEKN--VVY 275
Query: 510 RNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGI 557
R++K N+ LD++ + ++ +FG+ + C + +P+ N + +
Sbjct: 276 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN--DYGRAV 333
Query: 558 DIFAYGIVLLEVLSGQTPI 576
D + G+V+ E++ G+ P
Sbjct: 334 DWWGLGVVMYEMMCGRLPF 352
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 64/141 (45%), Gaps = 17/141 (12%)
Query: 397 GRLNGKNLAIKRTE-HEVITKLEMQLV--QHATHHHPNIVRLLGTCLTD---GPHSFLVF 450
G +G A+KR HE + E Q H +HPNI+RL+ CL + ++L+
Sbjct: 50 GLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLL 109
Query: 451 EYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHR 510
+ K G+L + + + + FLT Q L + L + L+ +H Y HR
Sbjct: 110 PFFKRGTLWN--------EIERLKDKGNFLTEDQILWLLLGICRGLEAIH---AKGYAHR 158
Query: 511 NIKSRNIFLDEEFNARVGNFG 531
++K NI L +E + + G
Sbjct: 159 DLKPTNILLGDEGQPVLMDLG 179
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 86/199 (43%), Gaps = 39/199 (19%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K + EVI T E +++Q++ HP + L + T F V
Sbjct: 170 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTALKYSFQTHDRLCF-V 226
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
EYA G L + H L+ + F F ++ AL Y+H N V+
Sbjct: 227 MEYANGGEL--FFH--LSRERVFSEDRARFY--------GAEIVSALDYLHSEKN--VVY 272
Query: 510 RNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGI 557
R++K N+ LD++ + ++ +FG+ + C + +P+ N + +
Sbjct: 273 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPEYLAPEVLEDN--DYGRAV 330
Query: 558 DIFAYGIVLLEVLSGQTPI 576
D + G+V+ E++ G+ P
Sbjct: 331 DWWGLGVVMYEMMCGRLPF 349
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 93/217 (42%), Gaps = 39/217 (17%)
Query: 398 RLNGKNLAIKRTEHEVI--------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLV 449
+ G+ A+K + EVI T E +++Q++ HP + L + T F V
Sbjct: 31 KATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNS--RHPFLTALKYSFQTHDRLCF-V 87
Query: 450 FEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVH 509
EYA G L + H L+ + F F ++ AL Y+H N V+
Sbjct: 88 MEYANGGEL--FFH--LSRERVFSEDRARFYG--------AEIVSALDYLHSEKN--VVY 133
Query: 510 RNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASWSMGI 557
R++K N+ LD++ + ++ +FG+ + C + +P+ N + +
Sbjct: 134 RDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPEYLAPEVLEDN--DYGRAV 191
Query: 558 DIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIK 594
D + G+V+ E++ G+ P + + L E+I+
Sbjct: 192 DWWGLGVVMYEMMCGRLPFYNQDHEKLFELILMEEIR 228
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/203 (22%), Positives = 86/203 (42%), Gaps = 32/203 (15%)
Query: 386 SSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPH 445
+ ++ E Y ++ K +K+ E + I L+++ H P +V L + T
Sbjct: 57 ARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKH--PFLVGLHFSFQTADKL 114
Query: 446 SFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNP 505
F++ D+++GG + + CFL R ++A AL Y+H +
Sbjct: 115 YFVL----------DYINGGELFYH--LQRERCFLEPRARFYAA-EIASALGYLHSL--- 158
Query: 506 SYVHRNIKSRNIFLDEEFNARVGNFGMAR------------CVNDDTESPQFYSTNPASW 553
+ V+R++K NI LD + + + +FG+ + C + +P+ P +
Sbjct: 159 NIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP--Y 216
Query: 554 SMGIDIFAYGIVLLEVLSGQTPI 576
+D + G VL E+L G P
Sbjct: 217 DRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 65 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 111
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 112 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 165
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKD 583
T +S+ DI++ G+ L+E+ G+ PI P K+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/225 (21%), Positives = 92/225 (40%), Gaps = 36/225 (16%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 6 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 64
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 65 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 111
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 112 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 165
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRPRKKD 583
T +S+ DI++ G+ L+E+ G+ PI P K+
Sbjct: 166 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 210
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
FLT + VA ++++ + +HR++ +RNI L E+ ++ +FG+AR +
Sbjct: 189 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 245
Query: 539 DTESPQFYSTN----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
D P + P W ++ D++++G++L E+ S G +P
Sbjct: 246 D---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 295
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 67 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 121
Query: 469 KNQFI 473
+N+F+
Sbjct: 122 RNEFV 126
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 52/106 (49%), Gaps = 19/106 (17%)
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
IC + L+ + ++ + + +HR++K N+ ++ + ++ +FG+AR + + + F +
Sbjct: 146 ICYFLYQILRGLKYIHSANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLT 205
Query: 548 T--------------NPASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
N ++ IDI++ G +L E+LS NRP
Sbjct: 206 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-----NRP 246
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
FLT + VA ++++ + +HR++ +RNI L E+ ++ +FG+AR +
Sbjct: 187 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 243
Query: 539 DTESPQFYSTN----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
D P + P W ++ D++++G++L E+ S G +P
Sbjct: 244 D---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 293
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 65 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 119
Query: 469 KNQFI 473
+N+F+
Sbjct: 120 RNEFV 124
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +FG+ R +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 54/113 (47%), Gaps = 22/113 (19%)
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
FLT + VA ++++ + +HR++ +RNI L E+ ++ +FG+AR +
Sbjct: 196 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 252
Query: 539 DTESPQFYSTN----PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
D P + P W ++ D++++G++L E+ S G +P
Sbjct: 253 D---PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 302
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 74 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 128
Query: 469 KNQFI 473
+N+F+
Sbjct: 129 RNEFV 133
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 16/110 (14%)
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
FLT + VA ++++ + +HR++ +RNI L E+ ++ +FG+AR +
Sbjct: 194 FLTLEHLICYSFQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYK 250
Query: 539 DTESPQFYSTN-PASW-----------SMGIDIFAYGIVLLEVLS-GQTP 575
D + + P W ++ D++++G++L E+ S G +P
Sbjct: 251 DPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASP 300
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 5/65 (7%)
Query: 409 TEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAM 468
+EH + E++++ H HH N+V LLG C G ++ E+ K G+L +L +
Sbjct: 72 SEHRALMS-ELKILIHIGHHL-NVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLR---SK 126
Query: 469 KNQFI 473
+N+F+
Sbjct: 127 RNEFV 131
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/102 (27%), Positives = 48/102 (47%), Gaps = 19/102 (18%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD--------TES 542
++ +A+ +H + YVHR+IK N+ LD + R+ +FG +NDD +
Sbjct: 183 EMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 239
Query: 543 PQFYS---TNPASWSMG-----IDIFAYGIVLLEVLSGQTPI 576
P + S MG D ++ G+ + E+L G+TP
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 19/102 (18%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD--------TES 542
++ +A+ +H + YVHR+IK N+ LD + R+ +FG +NDD +
Sbjct: 199 EMVLAIDSIHQL---HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGT 255
Query: 543 PQFYS--------TNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
P + S + D ++ G+ + E+L G+TP
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 67/152 (44%), Gaps = 23/152 (15%)
Query: 392 GAVYHGRLNGKNLAIK--RTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS--- 446
G V+ G +G+++A+K + E E ++ H NI+ + + +T S
Sbjct: 22 GEVWRGLWHGESVAVKIFSSRDEQSWFRETEIYNTVLLRHDNILGFIASDMTSRNSSTQL 81
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVM--- 503
+L+ Y ++GSL D+L + Q + LR+ + A L ++H +
Sbjct: 82 WLITHYHEHGSLYDFL------QRQTLEPHLA-------LRLAVSAACGLAHLHVEIFGT 128
Query: 504 --NPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
P+ HR+ KSRN+ + + + G+A
Sbjct: 129 QGKPAIAHRDFKSRNVLVKSNLQCCIADLGLA 160
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 392 GAVYHGR--LNGKNLAIKRTEH---------EVITKLEMQLVQHATHHHPNIVRLLGTCL 440
GAVY R N + +AIK+ + + I K E++ +Q HPN ++ G C
Sbjct: 68 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK-EVRFLQKL--RHPNTIQYRG-CY 123
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
++LV EY GS D L K Q + I ALQ +
Sbjct: 124 LREHTAWLVMEYCL-GSASDLLE---VHKKPL-----------QEVEIAAVTHGALQGLA 168
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV---NDDTESPQFY------STNPA 551
++ + + +HR++K+ NI L E ++G+FG A + N +P + + +
Sbjct: 169 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 228
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTPI 576
+ +D+++ GI +E+ + P+
Sbjct: 229 QYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 82/198 (41%), Gaps = 35/198 (17%)
Query: 394 VYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYA 453
VY +L K IKR++ + E ++ A + P +V+L D + ++V EY
Sbjct: 102 VYAMKLLSKFEMIKRSDSAFFWE-ERDIMAFA--NSPWVVQLF-CAFQDDKYLYMVMEYM 157
Query: 454 KNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIK 513
G L + M N + W++ +V +AL +H + +HR++K
Sbjct: 158 PGGDLVN------LMSNYDVPE-----KWAKFY--TAEVVLALDAIHSM---GLIHRDVK 201
Query: 514 SRNIFLDEEFNARVGNF---------GMARCVND----DTESPQFYSTNPASWSMG--ID 558
N+ LD+ + ++ +F GM C D SP+ + G D
Sbjct: 202 PDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECD 261
Query: 559 IFAYGIVLLEVLSGQTPI 576
++ G+ L E+L G TP
Sbjct: 262 WWSVGVFLFEMLVGDTPF 279
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 71/165 (43%), Gaps = 31/165 (18%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLK-DWLHGGLAMKNQFIASC 476
E++L+Q +H PNI+ LL F + N SL D++ L + I
Sbjct: 62 EIKLLQELSH--PNIIGLLDA-----------FGHKSNISLVFDFMETDLEV---IIKDN 105
Query: 477 YCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV 536
LT S L L+Y+H +HR++K N+ LDE ++ +FG+A+
Sbjct: 106 SLVLTPSHIKAYMLMTLQGLEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSF 162
Query: 537 NDDTES------PQFYST-----NPASWSMGIDIFAYGIVLLEVL 570
+ ++Y + +G+D++A G +L E+L
Sbjct: 163 GSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 34/180 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H NIVRL + +G H +LVF+ G L + + + C
Sbjct: 62 HSNIVRLHDSISEEGFH-YLVFDLVTGGELFEDIVAREYYSEADASHC------------ 108
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA---RVGNFGMARCVNDDTESPQF 545
+ L+ + H VHR++K N+ L + ++ +FG+A V D ++
Sbjct: 109 ---IQQILEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG 165
Query: 546 YSTNPA----------SWSMGIDIFAYGIVLLEVLSGQTPINRPRKKDEGSVWLSEKIKS 595
++ P ++ +DI+A G++L +L G P DE L ++IK+
Sbjct: 166 FAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF-----WDEDQHKLYQQIKA 220
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 89/205 (43%), Gaps = 39/205 (19%)
Query: 392 GAVYHGR--LNGKNLAIKRTEH---------EVITKLEMQLVQHATHHHPNIVRLLGTCL 440
GAVY R N + +AIK+ + + I K E++ +Q HPN ++ G C
Sbjct: 29 GAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK-EVRFLQKL--RHPNTIQYRG-CY 84
Query: 441 TDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMH 500
++LV EY GS D L K Q + I ALQ +
Sbjct: 85 LREHTAWLVMEYCL-GSASDLLE---VHKKPL-----------QEVEIAAVTHGALQGLA 129
Query: 501 HVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCV---NDDTESPQFY------STNPA 551
++ + + +HR++K+ NI L E ++G+FG A + N +P + + +
Sbjct: 130 YLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEG 189
Query: 552 SWSMGIDIFAYGIVLLEVLSGQTPI 576
+ +D+++ GI +E+ + P+
Sbjct: 190 QYDGKVDVWSLGITCIELAERKPPL 214
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 47/204 (23%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCL-TDGPHSFLVFEYAKNGSLKDWLHG 464
++ E EV+ KL +H NIV+L T H L+ E+ GSL L
Sbjct: 53 VQMREFEVLKKL----------NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-- 100
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL----D 520
+ ++ Y L S+ L + DV M+H+ VHRNIK NI D
Sbjct: 101 ------EEPSNAYG-LPESEFLIVLRDVVGG---MNHLRENGIVHRNIKPGNIMRVIGED 150
Query: 521 EEFNARVGNFGMARCVNDDTESPQFYST-----------------NPASWSMGIDIFAYG 563
+ ++ +FG AR + DD + Y T + + +D+++ G
Sbjct: 151 GQSVYKLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG 210
Query: 564 IVLLEVLSGQ---TPINRPRKKDE 584
+ +G P PR+ E
Sbjct: 211 VTFYHAATGSLPFRPFEGPRRNKE 234
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 392 GAVYHGR-LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGT----- 438
G VY + G+ +A+KR E E I E+ L++ HHPNIV L+
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL--HHPNIVSLIDVIHSER 92
Query: 439 CLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY 498
CLT LVFE+ + LK L +N+ T Q +I + + L+
Sbjct: 93 CLT------LVFEFMEK-DLKKVLD-----ENK---------TGLQDSQIKIYLYQLLRG 131
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-----ESPQFYSTNP--- 550
+ H +HR++K +N+ ++ + ++ +FG+AR E + P
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 551 ---ASWSMGIDIFAYGIVLLEVLSGQ 573
+S +DI++ G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 22/156 (14%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H NIVRL T+ + LVFE+ N LK + M ++ + + L +
Sbjct: 62 HENIVRLYDVIHTENKLT-LVFEFMDN-DLKKY------MDSRTVGNTPRGLELNLVKYF 113
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC----VND-DTESP 543
+ L + H +HR++K +N+ +++ ++G+FG+AR VN +E
Sbjct: 114 QWQLLQGLAFCHE---NKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV 170
Query: 544 QFYSTNP------ASWSMGIDIFAYGIVLLEVLSGQ 573
+ P ++S IDI++ G +L E+++G+
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/204 (24%), Positives = 79/204 (38%), Gaps = 47/204 (23%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCL-TDGPHSFLVFEYAKNGSLKDWLHG 464
++ E EV+ KL +H NIV+L T H L+ E+ GSL L
Sbjct: 53 VQMREFEVLKKL----------NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-- 100
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL----D 520
+ ++ Y L S+ L + DV M+H+ VHRNIK NI D
Sbjct: 101 ------EEPSNAYG-LPESEFLIVLRDVVGG---MNHLRENGIVHRNIKPGNIMRVIGED 150
Query: 521 EEFNARVGNFGMARCVNDDTESPQFYST-----------------NPASWSMGIDIFAYG 563
+ ++ +FG AR + DD + Y T + + +D+++ G
Sbjct: 151 GQSVYKLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIG 210
Query: 564 IVLLEVLSGQ---TPINRPRKKDE 584
+ +G P PR+ E
Sbjct: 211 VTFYHAATGSLPFRPFEGPRRNKE 234
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 13/81 (16%)
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-PASW-----------SM 555
+HR++ +RNI L E ++ +FG+AR + + + + T P W S
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYST 280
Query: 556 GIDIFAYGIVLLEVLS-GQTP 575
D+++YG++L E+ S G +P
Sbjct: 281 KSDVWSYGVLLWEIFSLGGSP 301
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 418 EMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL 462
E++++ H HH N+V LLG C G ++ EY K G+L ++L
Sbjct: 80 ELKILTHIGHHL-NVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 90/206 (43%), Gaps = 47/206 (22%)
Query: 392 GAVYHGR-LNGKNLAIKR----TEHEVITKL---EMQLVQHATHHHPNIVRLLGT----- 438
G VY + G+ +A+KR E E I E+ L++ HHPNIV L+
Sbjct: 35 GVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKEL--HHPNIVSLIDVIHSER 92
Query: 439 CLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQY 498
CLT LVFE+ + LK L +N+ T Q +I + + L+
Sbjct: 93 CLT------LVFEFMEK-DLKKVLD-----ENK---------TGLQDSQIKIYLYQLLRG 131
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-----ESPQFYSTNP--- 550
+ H +HR++K +N+ ++ + ++ +FG+AR E + P
Sbjct: 132 VAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVL 191
Query: 551 ---ASWSMGIDIFAYGIVLLEVLSGQ 573
+S +DI++ G + E+++G+
Sbjct: 192 MGSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 52/104 (50%), Gaps = 18/104 (17%)
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA-RCVNDDTE---- 541
++ + + AL Y+ +HR++K NI LDE ++ +FG++ R V+D +
Sbjct: 128 KMTVAIVKALYYLKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSA 185
Query: 542 ------SPQFYS----TNPASWSMGIDIFAYGIVLLEVLSGQTP 575
+P+ T P + + D+++ GI L+E+ +GQ P
Sbjct: 186 GCAAYMAPERIDPPDPTKP-DYDIRADVWSLGISLVELATGQFP 228
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ +F +AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ + G+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 52/239 (21%), Positives = 97/239 (40%), Gaps = 36/239 (15%)
Query: 356 GQIIDTAEQHKRLLESYSIEDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVIT 415
G++ + EQH ++ EDL+ E + + H + +G+ +A+KR V
Sbjct: 7 GKLKISPEQH----WDFTAEDLKDLGEIGRGAYGSVNKMVH-KPSGQIMAVKRIRSTVDE 61
Query: 416 KLEMQL-----VQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKN 470
K + QL V + P IV+ G +G ++ E K +
Sbjct: 62 KEQKQLLMDLDVVMRSSDCPYIVQFYGALFREG-DCWICMELMSTSFDKFY--------- 111
Query: 471 QFIASCYCFLTWSQRL-RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGN 529
+++ S + + L +I L AL ++ N +HR+IK NI LD N ++ +
Sbjct: 112 KYVYSVLDDVIPEEILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNIKLCD 169
Query: 530 FGMARCVNDDTESPQFYSTNP-------------ASWSMGIDIFAYGIVLLEVLSGQTP 575
FG++ + D + P + + D+++ GI L E+ +G+ P
Sbjct: 170 FGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ + G+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 81/193 (41%), Gaps = 31/193 (16%)
Query: 401 GKNLAIKRTEHEVITKLEM-QLVQ-----HATHHHPNIVRLLGTCLTDGPHSFLVFEYAK 454
G +AIK + + + K M Q VQ H HP+I+ L D + +LV E
Sbjct: 36 GLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNY-FEDSNYVYLVLEMCH 94
Query: 455 NGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKS 514
NG + +L KN+ + ++ + + Y+H + +HR++
Sbjct: 95 NGEMNRYL------KNRVKP-----FSENEARHFMHQIITGMLYLH---SHGILHRDLTL 140
Query: 515 RNIFLDEEFNARVGNFGMARCVNDDTE-------SPQFYSTNPASWS---MGIDIFAYGI 564
N+ L N ++ +FG+A + E +P + S A+ S + D+++ G
Sbjct: 141 SNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGC 200
Query: 565 VLLEVLSGQTPIN 577
+ +L G+ P +
Sbjct: 201 MFYTLLIGRPPFD 213
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/197 (23%), Positives = 91/197 (46%), Gaps = 44/197 (22%)
Query: 400 NGKNLAIKRT----EHEVITKL---EMQLVQHATHHHPNIVRLL-----GTCLTDGPHSF 447
+G+ +AIK+ + E+ K E+ L++H H N++ LL + L + +
Sbjct: 66 SGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHE--NVIGLLDVFTPASSLRNFYDFY 123
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
LV + + K M +F +L + Q L+ L+Y+H +
Sbjct: 124 LVMPFMQTDLQK-------IMGMEFSEEKIQYLVY-QMLK-------GLKYIH---SAGV 165
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN-------PASW---SMGI 557
VHR++K N+ ++E+ ++ +FG+AR + D E + T SW + +
Sbjct: 166 VHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 558 DIFAYGIVLLEVLSGQT 574
DI++ G ++ E+L+G+T
Sbjct: 224 DIWSVGCIMAEMLTGKT 240
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 66/156 (42%), Gaps = 27/156 (17%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H NIV L T+ + LVFEY + LK +L + N + F Q LR
Sbjct: 59 HANIVTLHDIIHTEKSLT-LVFEYL-DKDLKQYLDDCGNIINMHNVKLFLF----QLLR- 111
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN-----DDTESP 543
L Y H +HR++K +N+ ++E ++ +FG+AR + D E
Sbjct: 112 ------GLAYCH---RQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV 162
Query: 544 QFYSTNP------ASWSMGIDIFAYGIVLLEVLSGQ 573
+ P +S ID++ G + E+ +G+
Sbjct: 163 TLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 51/91 (56%), Gaps = 11/91 (12%)
Query: 492 VAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE---SPQFYST 548
+ L+Y+H + +HR++K N+ ++E+ ++ + G+AR +D+ + ++Y
Sbjct: 134 ILRGLKYIH---SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRA 190
Query: 549 -----NPASWSMGIDIFAYGIVLLEVLSGQT 574
N ++ +DI++ G ++ E+L+G+T
Sbjct: 191 PEIMLNWMHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 84/200 (42%), Gaps = 32/200 (16%)
Query: 392 GAVYHGRL-NGKNLAIKRT-EHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS--- 446
G V+ +L +AIK+ + + E+Q+++ H PN+V L ++G
Sbjct: 54 GVVFQAKLVESDEVAIKKVLQDKRFKNRELQIMRIVKH--PNVVDLKAFFYSNGDKKDEV 111
Query: 447 --FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMN 504
LV EY + H A Q + L Q LR +L Y+H +
Sbjct: 112 FLNLVLEYVPETVYRASRH--YAKLKQTMPMLLIKLYMYQLLR-------SLAYIHSI-- 160
Query: 505 PSYVHRNIKSRNIFLDEEFNA-RVGNFGMARCV-----NDDTESPQFYST-----NPASW 553
HR+IK +N+ LD ++ +FG A+ + N ++Y ++
Sbjct: 161 -GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNY 219
Query: 554 SMGIDIFAYGIVLLEVLSGQ 573
+ IDI++ G V+ E++ GQ
Sbjct: 220 TTNIDIWSTGCVMAELMQGQ 239
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 49/90 (54%), Gaps = 15/90 (16%)
Query: 495 ALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYSTN----- 549
L+Y+H + VHR++K N+ ++E+ ++ +FG+AR + D E + T
Sbjct: 138 GLKYIH---SAGVVHRDLKPGNLAVNEDCELKILDFGLAR--HADAEMTGYVVTRWYRAP 192
Query: 550 --PASW---SMGIDIFAYGIVLLEVLSGQT 574
SW + +DI++ G ++ E+L+G+T
Sbjct: 193 EVILSWMHYNQTVDIWSVGCIMAEMLTGKT 222
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 62/266 (23%)
Query: 373 SIEDLRRATE--KFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHP 430
+IE+ RA K + N+I ++N K++ +TE ++ KL HHP
Sbjct: 45 AIENQTRAIRAIKIMNKNKIR------QINPKDVERIKTEVRLMKKL----------HHP 88
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLH-------GGLAMKNQFIASCYC----- 478
NI RL D + LV E G L D L+ G AM C C
Sbjct: 89 NIARLY-EVYEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNE 147
Query: 479 ------------FLTWSQRLRICLDVAMAL-QYMHHVMNPSYVHRNIKSRNIFL--DEEF 523
L + QR ++ ++ + +H++ N HR+IK N ++ F
Sbjct: 148 EAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSF 207
Query: 524 NARVGNFGMAR---CVNDDTE-------------SPQFYSTNPASWSMGIDIFAYGIVLL 567
++ +FG+++ +N+ +P+ +T S+ D ++ G++L
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSAGVLLH 267
Query: 568 EVLSGQTPINRPRKKDEGSVWLSEKI 593
+L G P D S L++K+
Sbjct: 268 LLLMGAVPFPGVNDADTISQVLNKKL 293
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE--------- 541
++ L+ +H V+R++K NI LD+ + R+ + G+A V +
Sbjct: 294 EICCGLEDLHR---ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVG 350
Query: 542 --SPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRKK 582
+P+ ++ D +A G +L E+++GQ+P + +KK
Sbjct: 351 YMAPEVVKNE--RYTFSPDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 13/86 (15%)
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE-----------SPQFYSTNPASWSMG 556
V+R++K NI LD+ + R+ + G+A V + +P+ ++
Sbjct: 308 VYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNE--RYTFS 365
Query: 557 IDIFAYGIVLLEVLSGQTPINRPRKK 582
D +A G +L E+++GQ+P + +KK
Sbjct: 366 PDWWALGCLLYEMIAGQSPFQQRKKK 391
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 11/87 (12%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGM------ARCVNDDTESPQ 544
D +AL ++H + VH ++K NIFL ++G+FG+ A P+
Sbjct: 165 DTLLALAHLH---SQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPR 221
Query: 545 FYSTN--PASWSMGIDIFAYGIVLLEV 569
+ + S+ D+F+ G+ +LEV
Sbjct: 222 YMAPELLQGSYGTAADVFSLGLTILEV 248
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H ++V G C G + LV E+ K GSL +L KN+ +C L W
Sbjct: 71 HKHLVLNYGVCFC-GDENILVQEFVKFGSLDTYLK-----KNK---NCINIL-WK----- 115
Query: 489 CLDVAMALQY-MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------ 541
L+VA L + MH + + +H N+ ++NI L E + + GN + +
Sbjct: 116 -LEVAKQLAWAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPK 174
Query: 542 ---------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSG 572
P NP + ++ D +++G L E+ SG
Sbjct: 175 DILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 92/221 (41%), Gaps = 38/221 (17%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 9 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 67
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 68 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 114
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D+ + +F
Sbjct: 115 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDEMAN-EFVG 168
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPINRP 579
T +S+ DI++ G+ L+E+ G+ P RP
Sbjct: 169 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP--RP 207
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 379 RATEKFNSSNRIE----GAVYH--GRLNGKNLAIKRTEHEVITKLEMQ-----LVQHAT- 426
R T +F+ +I G+V+ RL+G AIKR++ + ++ Q + HA
Sbjct: 8 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 67
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
H ++VR D H + EY GSL D + +N I S + ++
Sbjct: 68 GQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAIS-----ENYRIMS---YFKEAELK 118
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
+ L V L+Y+H + S VH +IK NIF+
Sbjct: 119 DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 148
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 87/207 (42%), Gaps = 30/207 (14%)
Query: 388 NRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSF 447
++I G ++ K ++T+ E + + E+QL++ H PNI +L D + +
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLR-EVQLLKQLDH--PNIXKLY-EFFEDKGYFY 102
Query: 448 LVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSY 507
LV E G L D + + +F + RI V + Y H
Sbjct: 103 LVGEVYTGGELFD----EIISRKRF--------SEVDAARIIRQVLSGITYXH---KNKI 147
Query: 508 VHRNIKSRNIFLD---EEFNARVGNFGM-----ARCVNDDTESPQFY---STNPASWSMG 556
VHR++K N+ L+ ++ N R+ +FG+ A D +Y ++
Sbjct: 148 VHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYDEK 207
Query: 557 IDIFAYGIVLLEVLSGQTPINRPRKKD 583
D+++ G++L +LSG P N + D
Sbjct: 208 CDVWSTGVILYILLSGCPPFNGANEYD 234
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 379 RATEKFNSSNRIE----GAVYH--GRLNGKNLAIKRTEHEVITKLEMQ-----LVQHAT- 426
R T +F+ +I G+V+ RL+G AIKR++ + ++ Q + HA
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
H ++VR D H + EY GSL D + +N I S + ++
Sbjct: 66 GQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAIS-----ENYRIMS---YFKEAELK 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
+ L V L+Y+H + S VH +IK NIF+
Sbjct: 117 DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 68/159 (42%), Gaps = 30/159 (18%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H ++V G C+ G + LV E+ K GSL +L KN+ +C L W +L +
Sbjct: 71 HKHLVLNYGVCVC-GDENILVQEFVKFGSLDTYLK-----KNK---NCINIL-W--KLEV 118
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE------- 541
+A A MH + + +H N+ ++NI L E + + GN + +
Sbjct: 119 AKQLAAA---MHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKD 175
Query: 542 --------SPQFYSTNPASWSMGIDIFAYGIVLLEVLSG 572
P NP + ++ D +++G L E+ SG
Sbjct: 176 ILQERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSG 214
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 379 RATEKFNSSNRIE----GAVYH--GRLNGKNLAIKRTEHEVITKLEMQ-----LVQHAT- 426
R T +F+ +I G+V+ RL+G AIKR++ + ++ Q + HA
Sbjct: 6 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 65
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
H ++VR D H + EY GSL D + +N I S + ++
Sbjct: 66 GQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAIS-----ENYRIMS---YFKEAELK 116
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
+ L V L+Y+H + S VH +IK NIF+
Sbjct: 117 DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 146
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/203 (20%), Positives = 83/203 (40%), Gaps = 40/203 (19%)
Query: 398 RLNGKNLAIKRTEH--EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKN 455
+L + +A+K E + ++ +++ H + HPNIVR LT H ++ EYA
Sbjct: 42 KLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVILTPT-HLAIIMEYASG 100
Query: 456 GSLKDWL-HGGLAMKNQ---FIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRN 511
G L + + + G +++ F +++ ++IC HR+
Sbjct: 101 GELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQIC-------------------HRD 141
Query: 512 IKSRNIFLDEEFNAR--VGNFGMARCVNDDTESPQFYSTNPASWSMGI-----------D 558
+K N LD R + +FG ++ ++ P+ PA + + D
Sbjct: 142 LKLENTLLDGSPAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLRQEYDGKIAD 200
Query: 559 IFAYGIVLLEVLSGQTPINRPRK 581
+++ G+ L +L G P P +
Sbjct: 201 VWSCGVTLYVMLVGAYPFEDPEE 223
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 37.7 bits (86), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 16/115 (13%)
Query: 429 HPNIVRL-----LGTCLTD-GPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTW 482
HPNIV+ +G +D G FL+ G L ++L M+++ SC
Sbjct: 85 HPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLK---KMESRGPLSC------ 135
Query: 483 SQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
L+I A+Q+MH P +HR++K N+ L + ++ +FG A ++
Sbjct: 136 DTVLKIFYQTCRAVQHMHR-QKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTIS 189
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 24/153 (15%)
Query: 379 RATEKFNSSNRIE----GAVYH--GRLNGKNLAIKRTEHEVITKLEMQ-----LVQHAT- 426
R T +F+ +I G+V+ RL+G AIKR++ + ++ Q + HA
Sbjct: 4 RYTTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVL 63
Query: 427 HHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
H ++VR D H + EY GSL D + +N I S + ++
Sbjct: 64 GQHSHVVRYFSAWAEDD-HMLIQNEYCNGGSLADAIS-----ENYRIMS---YFKEAELK 114
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFL 519
+ L V L+Y+H + S VH +IK NIF+
Sbjct: 115 DLLLQVGRGLRYIHSM---SLVHMDIKPSNIFI 144
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 47/219 (21%), Positives = 89/219 (40%), Gaps = 36/219 (16%)
Query: 375 EDLRRATEKFNSSNRIEGAVYHGRLNGKNLAIKRTEHEVITKLEMQLVQHATHHH----P 430
+D + +E + + V H + +G +A K E+ + Q+++ H P
Sbjct: 25 DDFEKISELGAGNGGVVFKVSH-KPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSP 83
Query: 431 NIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL 490
IV G +DG S + E+ GSL L + Q + ++ +
Sbjct: 84 YIVGFYGAFYSDGEIS-ICMEHMDGGSLDQVLKKAGRIPEQILG------------KVSI 130
Query: 491 DVAMALQYM---HHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTESPQFYS 547
V L Y+ H +M HR++K NI ++ ++ +FG++ + D + F
Sbjct: 131 AVIKGLTYLREKHKIM-----HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN-SFVG 184
Query: 548 TNP---------ASWSMGIDIFAYGIVLLEVLSGQTPIN 577
T +S+ DI++ G+ L+E+ G+ PI
Sbjct: 185 TRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIG 223
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HPNIV+LL + + +++ E+ G++ + + LT SQ
Sbjct: 89 ASCDHPNIVKLLDAFYYEN-NLWILIEFCAGGAV-----------DAVMLELERPLTESQ 136
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
+C AL Y+H + +HR++K+ NI + + ++ +FG++
Sbjct: 137 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 37.0 bits (84), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 46/220 (20%)
Query: 382 EKFNSSNRI----EGAVYHGRLN-GKNLAIKRT----EHEVI---TKLEMQLVQHATHHH 429
EK++ +I G VY + N G+ A+K+ E E I T E+ +++ H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-- 59
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNG--SLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
NIV+L T LVFE+ L D GGL + FL
Sbjct: 60 SNIVKLYDVIHTK-KRLVLVFEHLDQDLKKLLDVCEGGLES-----VTAKSFL------- 106
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-----ES 542
L + + Y H + +HR++K +N+ ++ E ++ +FG+AR E
Sbjct: 107 --LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 543 PQFYSTNP------ASWSMGIDIFAYGIVLLEVLSGQTPI 576
+ P +S IDI++ G + E+++G TP+
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPL 200
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HPNIV+LL + + +++ E+ G++ + + LT SQ
Sbjct: 89 ASCDHPNIVKLLDAFYYEN-NLWILIEFCAGGAV-----------DAVMLELERPLTESQ 136
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
+C AL Y+H + +HR++K+ NI + + ++ +FG++
Sbjct: 137 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 37.0 bits (84), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HPNIV+LL + + +++ E+ G++ + + LT SQ
Sbjct: 89 ASCDHPNIVKLLDAFYYEN-NLWILIEFCAGGAV-----------DAVMLELERPLTESQ 136
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
+C AL Y+H + +HR++K+ NI + + ++ +FG++
Sbjct: 137 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 182
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 22/115 (19%)
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE----- 541
+I + + AL+++H + S +HR++K N+ ++ ++ +FG++ + DD
Sbjct: 113 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDA 170
Query: 542 -----------SPQF----YSTNPASWSMGIDIFAYGIVLLEVLSGQTPINRPRK 581
+P+ YS WS+GI + I+ S TP + ++
Sbjct: 171 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQ 225
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 92/220 (41%), Gaps = 46/220 (20%)
Query: 382 EKFNSSNRI----EGAVYHGRLN-GKNLAIKRT----EHEVI---TKLEMQLVQHATHHH 429
EK++ +I G VY + N G+ A+K+ E E I T E+ +++ H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-- 59
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNG--SLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
NIV+L T LVFE+ L D GGL + FL
Sbjct: 60 SNIVKLYDVIHTK-KRLVLVFEHLDQDLKKLLDVCEGGLES-----VTAKSFL------- 106
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-----ES 542
L + + Y H + +HR++K +N+ ++ E ++ +FG+AR E
Sbjct: 107 --LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEI 161
Query: 543 PQFYSTNP------ASWSMGIDIFAYGIVLLEVLSGQTPI 576
+ P +S IDI++ G + E+++G TP+
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG-TPL 200
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 52/109 (47%), Gaps = 15/109 (13%)
Query: 425 ATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQ 484
A+ HPNIV+LL + + +++ E+ G++ + + LT SQ
Sbjct: 62 ASCDHPNIVKLLDAFYYEN-NLWILIEFCAGGAV-----------DAVMLELERPLTESQ 109
Query: 485 RLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA 533
+C AL Y+H + +HR++K+ NI + + ++ +FG++
Sbjct: 110 IQVVCKQTLDALNYLH---DNKIIHRDLKAGNILFTLDGDIKLADFGVS 155
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL-HG 464
I+R E ++ ++ +++ H + HPNIVR LT H +V EYA G L + + +
Sbjct: 52 IERGE-KIAANVKREIINHRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFERICNA 109
Query: 465 GLAMKNQ---FIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
G +++ F +++ +++C HR++K N LD
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVC-------------------HRDLKLENTLLDG 150
Query: 522 EFNAR--VGNFGMARCVNDDTESPQFYSTNPASWSMGI-----------DIFAYGIVLLE 568
R + +FG ++ ++ P+ PA + + D+++ G+ L
Sbjct: 151 SPAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 569 VLSGQTPINRPRK 581
+L G P P +
Sbjct: 210 MLVGAYPFEDPEE 222
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 83/190 (43%), Gaps = 33/190 (17%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL-HG 464
I+R E ++ ++ +++ H + HPNIVR LT H +V EYA G L + + +
Sbjct: 52 IERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFERICNA 109
Query: 465 GLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFN 524
G +++ + + F Q+L + A A+Q HR++K N LD
Sbjct: 110 GRFSEDE---ARFFF----QQLISGVSYAHAMQ---------VAHRDLKLENTLLDGSPA 153
Query: 525 AR--VGNFGMARCVNDDTESPQFYSTNPASWSMGI-----------DIFAYGIVLLEVLS 571
R + +FG ++ ++ P+ PA + + D+++ G+ L +L
Sbjct: 154 PRLKIADFGYSKASVLHSQ-PKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLV 212
Query: 572 GQTPINRPRK 581
G P P +
Sbjct: 213 GAYPFEDPEE 222
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 45/216 (20%)
Query: 382 EKFNSSNRI----EGAVYHGRLN-GKNLAIKRT----EHEVI---TKLEMQLVQHATHHH 429
EK++ +I G VY + N G+ A+K+ E E I T E+ +++ H
Sbjct: 2 EKYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKH-- 59
Query: 430 PNIVRLLGTCLTDGPHSFLVFEYAKNG--SLKDWLHGGLAMKNQFIASCYCFLTWSQRLR 487
NIV+L T LVFE+ L D GGL + FL
Sbjct: 60 SNIVKLYDVIHTK-KRLVLVFEHLDQDLKKLLDVCEGGLES-----VTAKSFL------- 106
Query: 488 ICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-----ES 542
L + + Y H + +HR++K +N+ ++ E ++ +FG+AR E
Sbjct: 107 --LQLLNGIAYCH---DRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEV 161
Query: 543 PQFYSTNP------ASWSMGIDIFAYGIVLLEVLSG 572
+ P +S IDI++ G + E+++G
Sbjct: 162 VTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 16/63 (25%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 479 FLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVND 538
FLT I ++ + +++H +HR++K N L+++ + ++ +FG+AR +N
Sbjct: 127 FLTEQHVKTILYNLLLGEKFIHE---SGIIHRDLKPANCLLNQDCSVKICDFGLARTINS 183
Query: 539 DTE 541
D +
Sbjct: 184 DKD 186
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 35.8 bits (81), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/112 (21%), Positives = 47/112 (41%), Gaps = 22/112 (19%)
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE----- 541
+I + + AL+++H + S +HR++K N+ ++ + +FG++ + DD
Sbjct: 140 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDDVAKDIDA 197
Query: 542 -----------SPQF----YSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+P+ YS WS+GI I+ S TP +
Sbjct: 198 GCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQ 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHE------VITKL-EMQLVQHATHHHPNIVRLLGTCLTD 442
G V+ R G+ +A+K+ E IT L E++++Q H N+V L+ C T
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE--NVVNLIEICRTK 89
Query: 443 G-PHS------FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
P++ +LVF++ ++ L G +++ T S+ R+ + M
Sbjct: 90 ASPYNRCKASIYLVFDFCEHD-----LAG-------LLSNVLVKFTLSEIKRV---MQML 134
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR 534
L ++++ +HR++K+ N+ + + ++ +FG+AR
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 76/160 (47%), Gaps = 33/160 (20%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHE------VITKL-EMQLVQHATHHHPNIVRLLGTCLTD 442
G V+ R G+ +A+K+ E IT L E++++Q H N+V L+ C T
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE--NVVNLIEICRTK 89
Query: 443 G-PHS------FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
P++ +LVF++ ++ L G +++ T S+ R+ + M
Sbjct: 90 ASPYNRCKGSIYLVFDFCEHD-----LAG-------LLSNVLVKFTLSEIKRV---MQML 134
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARC 535
L ++++ +HR++K+ N+ + + ++ +FG+AR
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARA 174
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD--------TES 542
++ +A+ +H + YVHR+IK NI +D + R+ +FG + +D +
Sbjct: 183 EMVIAIDSVHQL---HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGT 239
Query: 543 PQFYS--------TNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
P + S + D ++ G+ + E+L G+TP
Sbjct: 240 PDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHE------VITKL-EMQLVQHATHHHPNIVRLLGTCLTD 442
G V+ R G+ +A+K+ E IT L E++++Q H N+V L+ C T
Sbjct: 32 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE--NVVNLIEICRTK 89
Query: 443 G-PHS------FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
P++ +LVF++ ++ L G +++ T S+ R+ + M
Sbjct: 90 ASPYNRCKGSIYLVFDFCEHD-----LAG-------LLSNVLVKFTLSEIKRV---MQML 134
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR 534
L ++++ +HR++K+ N+ + + ++ +FG+AR
Sbjct: 135 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 76/159 (47%), Gaps = 33/159 (20%)
Query: 392 GAVYHGR--LNGKNLAIKRTEHE------VITKL-EMQLVQHATHHHPNIVRLLGTCLTD 442
G V+ R G+ +A+K+ E IT L E++++Q H N+V L+ C T
Sbjct: 31 GEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE--NVVNLIEICRTK 88
Query: 443 G-PHS------FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMA 495
P++ +LVF++ ++ L G +++ T S+ R+ + M
Sbjct: 89 ASPYNRCKGSIYLVFDFCEHD-----LAG-------LLSNVLVKFTLSEIKRV---MQML 133
Query: 496 LQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR 534
L ++++ +HR++K+ N+ + + ++ +FG+AR
Sbjct: 134 LNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 80/193 (41%), Gaps = 39/193 (20%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL-HG 464
I+R E ++ ++ +++ H + HPNIVR LT H +V EYA G L + + +
Sbjct: 51 IERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFERICNA 108
Query: 465 GLAMKNQ---FIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
G +++ F +++ +++C HR++K N LD
Sbjct: 109 GRFSEDEARFFFQQLISGVSYCHAMQVC-------------------HRDLKLENTLLDG 149
Query: 522 EFNAR--VGNFGMARCVNDDTESPQFYSTNPASWSMGI-----------DIFAYGIVLLE 568
R + +FG ++ ++ P+ PA + + D+++ G+ L
Sbjct: 150 SPAPRLKICDFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 208
Query: 569 VLSGQTPINRPRK 581
+L G P P +
Sbjct: 209 MLVGAYPFEDPEE 221
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G+++ E++ G
Sbjct: 199 GMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 34.7 bits (78), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 42/104 (40%), Gaps = 21/104 (20%)
Query: 491 DVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFG-------------MARCVN 537
++ MA+ +H + YVHR+IK NI LD + R+ +FG +
Sbjct: 170 EIVMAIDSVHRL---GYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 538 DDTESPQFYSTNPASWSMGI-----DIFAYGIVLLEVLSGQTPI 576
D SP+ G D +A G+ E+ GQTP
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPF 270
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/112 (20%), Positives = 48/112 (42%), Gaps = 22/112 (19%)
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTE----- 541
+I + + AL+++H + S +HR++K N+ ++ ++ +FG++ + D
Sbjct: 157 KIAVSIVKALEHLHSKL--SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAKTIDA 214
Query: 542 -----------SPQF----YSTNPASWSMGIDIFAYGIVLLEVLSGQTPINR 578
+P+ YS WS+GI + I+ S TP +
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQ 266
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 35/65 (53%), Gaps = 3/65 (4%)
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
FLT I ++ + ++H +HR++K N L+++ + +V +FG+AR +N
Sbjct: 124 IFLTEEHIKTILYNLLLGENFIHE---SGIIHRDLKPANCLLNQDCSVKVCDFGLARTIN 180
Query: 538 DDTES 542
+ ++
Sbjct: 181 SEKDT 185
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 34.3 bits (77), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/189 (19%), Positives = 70/189 (37%), Gaps = 45/189 (23%)
Query: 399 LNGKNLAIKRTEHEVI------TKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEY 452
L G+ +AIK + + K E++ +++ H H + L L F+V EY
Sbjct: 33 LTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQH---ICQLYHVLETANKIFMVLEY 89
Query: 453 AKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICL-DVAMALQYMHHVMNPSYVHRN 511
G L D++ + + R+ + A+ Y+H + Y HR+
Sbjct: 90 CPGGELFDYIISQDRLS-------------EEETRVVFRQIVSAVAYVH---SQGYAHRD 133
Query: 512 IKSRNIFLDEEFNARVGNFG-------------------MARCVNDDTESPQFYSTNPAS 552
+K N+ DE ++ +FG +A + + + +
Sbjct: 134 LKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADV 193
Query: 553 WSMGIDIFA 561
WSMGI ++
Sbjct: 194 WSMGILLYV 202
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 15/80 (18%)
Query: 509 HRNIKSRNIFLDEEFNARVGNFGMARCVNDDT-------------ESPQFYSTNPASWSM 555
HR++K NI + + A + +FG+A D+ +P+ +S + A++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 556 GIDIFAYGIVLLEVLSGQTP 575
DI+A VL E L+G P
Sbjct: 217 --DIYALTCVLYECLTGSPP 234
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 79/193 (40%), Gaps = 39/193 (20%)
Query: 406 IKRTEHEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWL-HG 464
I+R E ++ ++ +++ H + HPNIVR LT H +V EYA G L + + +
Sbjct: 52 IERGE-KIDENVKREIINHRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFERICNA 109
Query: 465 GLAMKNQ---FIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDE 521
G +++ F +++ +++C HR++K N LD
Sbjct: 110 GRFSEDEARFFFQQLISGVSYCHAMQVC-------------------HRDLKLENTLLDG 150
Query: 522 EFNAR--VGNFGMARCVNDDTESPQFYSTNPASWSMGI-----------DIFAYGIVLLE 568
R + FG ++ ++ P+ PA + + D+++ G+ L
Sbjct: 151 SPAPRLKICAFGYSKSSVLHSQ-PKSTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYV 209
Query: 569 VLSGQTPINRPRK 581
+L G P P +
Sbjct: 210 MLVGAYPFEDPEE 222
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/196 (20%), Positives = 79/196 (40%), Gaps = 38/196 (19%)
Query: 404 LAIKRTE--HEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDW 461
+A+K E ++ ++ +++ H + HPNIVR LT H +V EYA G L +
Sbjct: 47 VAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILTPT-HLAIVMEYASGGELFER 105
Query: 462 L-HGGLAMKNQ---FIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNI 517
+ + G +++ F +++ +++C HR++K N
Sbjct: 106 ICNAGRFSEDEARFFFQQLISGVSYCHAMQVC-------------------HRDLKLENT 146
Query: 518 FLDEEFNAR--VGNFGMARCV------NDDTESPQFYSTN---PASWSMGI-DIFAYGIV 565
LD R + FG ++ D +P + + + + D+++ G+
Sbjct: 147 LLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 566 LLEVLSGQTPINRPRK 581
L +L G P P +
Sbjct: 207 LYVMLVGAYPFEDPEE 222
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 33.9 bits (76), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/155 (21%), Positives = 62/155 (40%), Gaps = 40/155 (25%)
Query: 447 FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPS 506
+LVFE + GS+ +H N+ AS + DVA AL ++H N
Sbjct: 87 YLVFEKMRGGSILSHIHKRRHF-NELEASV-----------VVQDVASALDFLH---NKG 131
Query: 507 YVHRNIKSRNIFLDEEFNA---RVGNFGMAR-------------------CVNDDTESPQ 544
HR++K NI + ++ +FG+ C + + +P+
Sbjct: 132 IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPE 191
Query: 545 F---YSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+S + + D+++ G++L +LSG P
Sbjct: 192 VVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 33.5 bits (75), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMAR--CVN---DDTESPQFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR C N ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYAANVDIWSVGCIMGELVKG 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR + + +P ++Y
Sbjct: 137 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVIL 196
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 197 GMGYKENVDIWSVGCIMGELVKG 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESPQ----FYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P+ +Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 200 GMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 199 GMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 86/199 (43%), Gaps = 46/199 (23%)
Query: 401 GKNLAIKRTE------HEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE--Y 452
G+ +AIK+ E + T E+++++H H NI+ + P SF F Y
Sbjct: 36 GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE--NIITIFNI---QRPDSFENFNEVY 90
Query: 453 AKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNI 512
++ LH + Q ++ + Q LR A++ +H + +HR++
Sbjct: 91 IIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDL 138
Query: 513 KSRNIFLDEEFNARVGNFGMARCVND---DTESP--------QFYST----------NPA 551
K N+ ++ + +V +FG+AR +++ D P +F +T A
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPEVMLTSA 198
Query: 552 SWSMGIDIFAYGIVLLEVL 570
+S +D+++ G +L E+
Sbjct: 199 KYSRAMDVWSCGCILAELF 217
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 17/70 (24%)
Query: 508 VHRNIKSRNIFLDEEFNARVGNFGMAR-----------CVNDDTESPQFYSTNP------ 550
+HR+IK NI + E+F ++ +FG A C + +P+ NP
Sbjct: 152 IHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPEL 211
Query: 551 ASWSMGIDIF 560
WS+G+ ++
Sbjct: 212 EMWSLGVTLY 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 32.7 bits (73), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 39/83 (46%), Gaps = 9/83 (10%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDDTES-----PQFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR ++Y
Sbjct: 141 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVIL 200
Query: 554 SMG----IDIFAYGIVLLEVLSG 572
MG +DI++ G ++ E++ G
Sbjct: 201 GMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 48/200 (24%)
Query: 401 GKNLAIKRTE------HEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE--Y 452
G+ +AIK+ E + T E+++++H H NI+ + P SF F Y
Sbjct: 36 GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE--NIITIFNI---QRPDSFENFNEVY 90
Query: 453 AKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNI 512
++ LH + Q ++ + Q LR A++ +H + +HR++
Sbjct: 91 IIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDL 138
Query: 513 KSRNIFLDEEFNARVGNFGMARCVN----DDTE------------------SPQFYSTNP 550
K N+ ++ + +V +FG+AR ++ D++E +P+ T+
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPEVMLTS- 197
Query: 551 ASWSMGIDIFAYGIVLLEVL 570
A +S +D+++ G +L E+
Sbjct: 198 AKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 43/200 (21%), Positives = 88/200 (44%), Gaps = 48/200 (24%)
Query: 401 GKNLAIKRTE------HEVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHSFLVFE--Y 452
G+ +AIK+ E + T E+++++H H NI+ + P SF F Y
Sbjct: 36 GEIVAIKKIEPFDKPLFALRTLREIKILKHFKHE--NIITIFNI---QRPDSFENFNEVY 90
Query: 453 AKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNI 512
++ LH + Q ++ + Q LR A++ +H + +HR++
Sbjct: 91 IIQELMQTDLHR--VISTQMLSDDHIQYFIYQTLR-------AVKVLH---GSNVIHRDL 138
Query: 513 KSRNIFLDEEFNARVGNFGMARCVN----DDTE------------------SPQFYSTNP 550
K N+ ++ + +V +FG+AR ++ D++E +P+ T+
Sbjct: 139 KPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPEVMLTS- 197
Query: 551 ASWSMGIDIFAYGIVLLEVL 570
A +S +D+++ G +L E+
Sbjct: 198 AKYSRAMDVWSCGCILAELF 217
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/159 (22%), Positives = 68/159 (42%), Gaps = 27/159 (16%)
Query: 429 HPNIVRLLGTCLTDGPHSFLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRLRI 488
H NIVRL +D + LVFE+ + LK + + I + F Q L+
Sbjct: 60 HKNIVRLHDVLHSDKKLT-LVFEFC-DQDLKKYFDSCNGDLDPEIVKSFLF----QLLK- 112
Query: 489 CLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMA-------RCVNDDTE 541
L + H + + +HR++K +N+ ++ ++ NFG+A RC + +
Sbjct: 113 ------GLGFCH---SRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV 163
Query: 542 S----PQFYSTNPASWSMGIDIFAYGIVLLEVLSGQTPI 576
+ P +S ID+++ G + E+ + P+
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 39/181 (21%), Positives = 75/181 (41%), Gaps = 31/181 (17%)
Query: 412 EVITKLEMQLVQHATHHHPNIVRLLGTCLTDGPHS-FLVFEYAKNGSLKDWLHGGLAMKN 470
E K E+QL++ H N+++L+ + ++V EY G +++ L ++
Sbjct: 50 EANVKKEIQLLRRLRHK--NVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD---SVPE 103
Query: 471 QFIASCYCFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNF 530
+ C + Q + L+Y+H + VH++IK N+ L ++
Sbjct: 104 KRFPVCQAHGYFCQLID-------GLEYLH---SQGIVHKDIKPGNLLLTTGGTLKISAL 153
Query: 531 GMARCVN----DDT-----ESPQFYSTNPASW-----SMGIDIFAYGIVLLEVLSGQTPI 576
G+A ++ DDT SP F A+ +DI++ G+ L + +G P
Sbjct: 154 GVAEALHPFAADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
Query: 577 N 577
Sbjct: 214 E 214
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/97 (20%), Positives = 45/97 (46%), Gaps = 3/97 (3%)
Query: 478 CFLTWSQRLRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN 537
+LT + ++ + ++Y+H + +HR++K N ++++ + +V +FG+AR V+
Sbjct: 151 VYLTELHIKTLLYNLLVGVKYVH---SAGILHRDLKPANCLVNQDCSVKVCDFGLARTVD 207
Query: 538 DDTESPQFYSTNPASWSMGIDIFAYGIVLLEVLSGQT 574
+P M + F + L L+G
Sbjct: 208 YPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHV 244
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 486 LRICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNARV--GNFGMA 533
L++ + AL+++H YVH N+ + NIF+D E ++V +G A
Sbjct: 162 LQVACRLLDALEFLHEN---EYVHGNVTAENIFVDPEDQSQVTLAGYGFA 208
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/81 (20%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN-----DDTESPQFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR + ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 30.4 bits (67), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 30.0 bits (66), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 177 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 236
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 237 GMGYKENVDIWSVGCIMGEMV 257
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 140 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 199
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 200 GMGYKENVDIWSVGCIMGEMV 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 132 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 191
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 192 GMGYKENVDIWSVGCIMGEMV 212
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 138 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 197
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 198 GMGYKENVDIWSVGCIMGEMV 218
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 199 GMGYKENVDIWSVGCIMGEMV 219
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/81 (22%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVNDD-TESP----QFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR +P ++Y
Sbjct: 133 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVIL 192
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +DI++ G ++ E++
Sbjct: 193 GMGYKENVDIWSVGCIMGEMV 213
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.0 bits (66), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 87 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 129
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 130 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 87 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 129
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 130 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 174
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.0 bits (66), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 86 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 128
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 129 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 173
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 107 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 149
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 150 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 29.6 bits (65), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 24/108 (22%)
Query: 430 PNIVRLLGTCLTDGPHS---FLVFEYAKNGSLKDWLHGGLAMKNQFIASCYCFLTWSQRL 486
PNIV+LL + HS L+FEY N K Y LT
Sbjct: 88 PNIVKLLD--IVRDQHSKTPSLIFEYVNNTDFK---------------VLYPTLTDYDIR 130
Query: 487 RICLDVAMALQYMHHVMNPSYVHRNIKSRNIFLDEEFNA-RVGNFGMA 533
++ AL Y H + +HR++K N+ +D E R+ ++G+A
Sbjct: 131 YYIYELLKALDYCH---SQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 175
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 29.3 bits (64), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/81 (19%), Positives = 39/81 (48%), Gaps = 9/81 (11%)
Query: 499 MHHVMNPSYVHRNIKSRNIFLDEEFNARVGNFGMARCVN-----DDTESPQFYSTNPASW 553
+ H+ + +HR++K NI + + ++ +FG+AR + ++Y
Sbjct: 139 IKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVIL 198
Query: 554 SMG----IDIFAYGIVLLEVL 570
MG +D+++ G ++ E++
Sbjct: 199 GMGYKENVDLWSVGCIMGEMV 219
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.133 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,752,995
Number of Sequences: 62578
Number of extensions: 655203
Number of successful extensions: 2955
Number of sequences better than 100.0: 855
Number of HSP's better than 100.0 without gapping: 531
Number of HSP's successfully gapped in prelim test: 324
Number of HSP's that attempted gapping in prelim test: 1729
Number of HSP's gapped (non-prelim): 919
length of query: 600
length of database: 14,973,337
effective HSP length: 104
effective length of query: 496
effective length of database: 8,465,225
effective search space: 4198751600
effective search space used: 4198751600
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)