Query 041833
Match_columns 427
No_of_seqs 224 out of 1651
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 11:07:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041833.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/041833hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 2.3E-98 5E-103 764.8 32.8 350 68-419 23-453 (454)
2 PLN02209 serine carboxypeptida 100.0 1.1E-87 2.4E-92 691.7 35.5 345 68-416 18-437 (437)
3 PLN03016 sinapoylglucose-malat 100.0 9.2E-87 2E-91 684.7 35.0 343 70-416 18-433 (433)
4 PF00450 Peptidase_S10: Serine 100.0 3.5E-86 7.7E-91 678.5 27.6 333 79-413 1-415 (415)
5 PTZ00472 serine carboxypeptida 100.0 4.3E-78 9.2E-83 626.9 33.0 334 79-416 37-461 (462)
6 PLN02213 sinapoylglucose-malat 100.0 8.4E-60 1.8E-64 469.4 25.2 251 163-416 1-319 (319)
7 COG2939 Carboxypeptidase C (ca 100.0 7.3E-58 1.6E-62 463.0 20.5 329 78-414 65-491 (498)
8 KOG1283 Serine carboxypeptidas 100.0 4.1E-56 8.9E-61 423.5 12.6 313 90-411 4-411 (414)
9 TIGR03611 RutD pyrimidine util 99.6 1.9E-14 4E-19 135.4 16.0 227 116-412 11-256 (257)
10 TIGR01250 pro_imino_pep_2 prol 99.6 9.7E-14 2.1E-18 132.3 21.0 129 90-261 3-132 (288)
11 PRK00870 haloalkane dehalogena 99.6 3.4E-13 7.4E-18 132.7 21.6 266 72-415 8-302 (302)
12 PLN02824 hydrolase, alpha/beta 99.5 5.1E-13 1.1E-17 130.7 20.2 249 93-413 12-293 (294)
13 PRK10673 acyl-CoA esterase; Pr 99.5 9.2E-13 2E-17 125.3 20.6 226 113-413 11-254 (255)
14 PLN02298 hydrolase, alpha/beta 99.5 7.3E-13 1.6E-17 132.1 20.7 269 91-426 34-329 (330)
15 TIGR03056 bchO_mg_che_rel puta 99.5 7.4E-13 1.6E-17 126.9 17.8 233 114-412 24-278 (278)
16 PHA02857 monoglyceride lipase; 99.5 2.6E-12 5.7E-17 124.3 20.7 243 100-414 9-273 (276)
17 TIGR03343 biphenyl_bphD 2-hydr 99.5 1.1E-12 2.3E-17 126.9 17.7 232 117-412 29-281 (282)
18 PLN02385 hydrolase; alpha/beta 99.5 3.3E-12 7.2E-17 128.7 19.5 252 100-414 70-345 (349)
19 TIGR02427 protocat_pcaD 3-oxoa 99.5 3E-12 6.4E-17 119.1 16.8 229 116-412 11-251 (251)
20 TIGR02240 PHA_depoly_arom poly 99.5 4.5E-12 9.8E-17 123.0 18.6 232 101-414 11-266 (276)
21 PRK03204 haloalkane dehalogena 99.4 2.8E-12 6.1E-17 125.8 17.0 248 91-411 16-285 (286)
22 PLN02679 hydrolase, alpha/beta 99.4 8.9E-12 1.9E-16 126.4 19.2 236 117-414 87-357 (360)
23 PRK03592 haloalkane dehalogena 99.4 8.7E-12 1.9E-16 122.1 18.0 251 93-417 11-292 (295)
24 PRK10349 carboxylesterase BioH 99.4 7.3E-12 1.6E-16 119.9 14.9 221 119-412 14-254 (256)
25 TIGR01738 bioH putative pimelo 99.4 8.9E-12 1.9E-16 115.6 14.9 57 331-411 189-245 (245)
26 PLN03084 alpha/beta hydrolase 99.4 2.5E-11 5.4E-16 124.1 18.6 255 87-413 102-383 (383)
27 PF12697 Abhydrolase_6: Alpha/ 99.3 4.9E-12 1.1E-16 115.4 10.4 217 121-405 1-227 (228)
28 PLN02578 hydrolase 99.3 3.8E-11 8.3E-16 121.4 17.3 112 101-259 75-186 (354)
29 PLN02965 Probable pheophorbida 99.3 1.9E-11 4.1E-16 117.4 13.5 225 121-413 6-252 (255)
30 PRK11126 2-succinyl-6-hydroxy- 99.3 6.1E-11 1.3E-15 112.0 15.5 101 118-260 2-102 (242)
31 PRK06489 hypothetical protein; 99.3 1.4E-10 3.1E-15 117.4 19.2 143 86-259 38-188 (360)
32 PRK08775 homoserine O-acetyltr 99.3 6.9E-11 1.5E-15 118.9 16.6 60 331-413 278-338 (343)
33 TIGR03695 menH_SHCHC 2-succiny 99.3 1.1E-10 2.4E-15 108.0 16.4 104 118-260 1-105 (251)
34 PRK10749 lysophospholipase L2; 99.3 1.7E-10 3.7E-15 115.5 18.6 253 100-414 39-329 (330)
35 KOG4178 Soluble epoxide hydrol 99.3 1.4E-10 3E-15 113.7 16.6 261 88-413 21-319 (322)
36 PLN03087 BODYGUARD 1 domain co 99.3 1.3E-10 2.8E-15 121.8 17.0 262 88-413 175-478 (481)
37 PLN02652 hydrolase; alpha/beta 99.3 6.5E-10 1.4E-14 114.2 21.6 250 100-414 119-387 (395)
38 PLN02894 hydrolase, alpha/beta 99.3 2.4E-10 5.1E-15 117.8 18.4 109 116-260 103-211 (402)
39 PRK14875 acetoin dehydrogenase 99.2 6.2E-10 1.4E-14 112.1 19.2 224 116-413 129-370 (371)
40 TIGR01249 pro_imino_pep_1 prol 99.2 8.5E-10 1.8E-14 109.1 18.7 126 91-261 6-131 (306)
41 PRK07581 hypothetical protein; 99.2 7.8E-10 1.7E-14 110.8 18.5 58 331-412 276-334 (339)
42 KOG4409 Predicted hydrolase/ac 99.1 1.6E-09 3.5E-14 106.8 17.0 120 107-263 79-198 (365)
43 TIGR01607 PST-A Plasmodium sub 99.1 6.1E-09 1.3E-13 104.6 21.7 273 100-413 6-332 (332)
44 PRK00175 metX homoserine O-ace 99.1 1.3E-08 2.8E-13 104.0 19.8 64 331-414 310-374 (379)
45 PLN02211 methyl indole-3-aceta 99.0 9.4E-09 2E-13 100.3 16.9 226 116-413 16-269 (273)
46 PLN02980 2-oxoglutarate decarb 99.0 2.6E-09 5.7E-14 126.8 14.9 241 115-415 1368-1640(1655)
47 COG1506 DAP2 Dipeptidyl aminop 99.0 2.4E-09 5.1E-14 116.3 13.1 237 94-412 368-614 (620)
48 KOG1454 Predicted hydrolase/ac 99.0 7.1E-09 1.5E-13 103.9 15.1 60 331-414 265-324 (326)
49 PRK05855 short chain dehydroge 99.0 1.2E-08 2.6E-13 108.8 16.0 101 101-233 12-112 (582)
50 TIGR01392 homoserO_Ac_trn homo 98.9 4E-08 8.7E-13 99.2 18.2 62 331-412 289-351 (351)
51 PRK05077 frsA fermentation/res 98.9 2.8E-08 6.1E-13 102.8 16.7 187 164-414 223-412 (414)
52 PLN02511 hydrolase 98.9 1.7E-08 3.6E-13 103.7 14.1 114 93-234 75-192 (388)
53 COG2267 PldB Lysophospholipase 98.9 1.9E-07 4.1E-12 92.5 20.5 263 89-415 9-295 (298)
54 PRK10566 esterase; Provisional 98.8 1.3E-07 2.9E-12 90.0 16.1 60 332-413 188-247 (249)
55 TIGR03100 hydr1_PEP hydrolase, 98.8 2.5E-07 5.5E-12 90.3 18.1 80 163-262 57-136 (274)
56 PF00561 Abhydrolase_1: alpha/ 98.8 1.3E-08 2.9E-13 94.1 7.3 54 331-408 176-229 (230)
57 COG0596 MhpC Predicted hydrola 98.7 1.6E-06 3.5E-11 79.3 19.0 104 118-261 21-124 (282)
58 KOG1455 Lysophospholipase [Lip 98.7 1.1E-06 2.3E-11 85.6 17.7 252 99-413 35-311 (313)
59 PRK10985 putative hydrolase; P 98.6 3.9E-07 8.5E-12 91.0 13.8 129 101-262 41-170 (324)
60 PRK06765 homoserine O-acetyltr 98.6 3.5E-06 7.5E-11 86.6 19.6 64 331-414 324-388 (389)
61 KOG2564 Predicted acetyltransf 98.6 3.4E-07 7.4E-12 87.9 10.7 111 116-260 72-182 (343)
62 PF00326 Peptidase_S9: Prolyl 98.5 1.2E-06 2.6E-11 81.8 12.8 190 162-412 13-207 (213)
63 PRK11071 esterase YqiA; Provis 98.4 5.6E-06 1.2E-10 76.6 13.6 186 119-412 2-189 (190)
64 PLN02872 triacylglycerol lipas 98.4 1.3E-05 2.9E-10 82.4 17.5 60 331-413 326-388 (395)
65 TIGR01840 esterase_phb esteras 98.2 1.8E-05 3.8E-10 74.1 12.5 117 115-259 10-129 (212)
66 PRK11460 putative hydrolase; P 98.2 3.6E-05 7.9E-10 73.4 14.1 60 332-411 150-209 (232)
67 PF10340 DUF2424: Protein of u 98.2 2.8E-06 6.2E-11 85.8 6.2 131 104-263 106-238 (374)
68 PLN02442 S-formylglutathione h 98.1 4.6E-05 9.9E-10 74.9 13.9 56 195-263 126-181 (283)
69 PRK10115 protease 2; Provision 98.1 4.1E-05 8.9E-10 84.2 14.5 229 94-402 419-661 (686)
70 TIGR02821 fghA_ester_D S-formy 98.1 0.00011 2.3E-09 71.9 15.9 42 212-263 135-176 (275)
71 KOG2100 Dipeptidyl aminopeptid 98.1 4.9E-05 1.1E-09 84.3 14.5 230 103-416 509-748 (755)
72 PF12695 Abhydrolase_5: Alpha/ 98.1 1.6E-05 3.4E-10 68.6 8.5 144 120-394 1-145 (145)
73 PRK13604 luxD acyl transferase 98.1 0.0001 2.2E-09 73.1 15.1 224 100-397 18-247 (307)
74 KOG1515 Arylacetamide deacetyl 97.9 0.00045 9.8E-09 69.5 16.3 138 100-264 70-211 (336)
75 PRK10162 acetyl esterase; Prov 97.9 0.00028 6E-09 70.5 14.2 194 163-413 112-314 (318)
76 TIGR01836 PHA_synth_III_C poly 97.9 0.00047 1E-08 69.6 15.7 60 331-413 287-349 (350)
77 TIGR03101 hydr2_PEP hydrolase, 97.9 4.3E-05 9.3E-10 74.5 7.8 128 102-264 10-138 (266)
78 KOG2382 Predicted alpha/beta h 97.8 0.00058 1.2E-08 67.5 15.5 90 111-226 45-134 (315)
79 PF02230 Abhydrolase_2: Phosph 97.8 6.1E-05 1.3E-09 70.8 7.8 129 193-412 85-213 (216)
80 COG3509 LpqC Poly(3-hydroxybut 97.7 0.0025 5.4E-08 62.3 17.4 223 101-401 44-282 (312)
81 COG1647 Esterase/lipase [Gener 97.7 0.00059 1.3E-08 63.9 12.6 221 119-413 16-243 (243)
82 TIGR01838 PHA_synth_I poly(R)- 97.7 0.002 4.4E-08 68.7 17.6 85 163-263 220-305 (532)
83 PF10503 Esterase_phd: Esteras 97.5 0.00098 2.1E-08 63.2 11.5 39 211-259 93-131 (220)
84 KOG1552 Predicted alpha/beta h 97.5 0.0011 2.5E-08 63.4 11.6 192 116-413 58-251 (258)
85 COG0400 Predicted esterase [Ge 97.4 0.002 4.4E-08 60.5 12.0 130 190-413 75-204 (207)
86 COG3208 GrsT Predicted thioest 97.4 0.0038 8.2E-08 59.5 13.6 199 164-412 34-234 (244)
87 cd00707 Pancreat_lipase_like P 97.3 0.00015 3.3E-09 71.0 3.0 113 116-260 34-147 (275)
88 KOG4391 Predicted alpha/beta h 97.2 0.0026 5.7E-08 59.5 9.4 216 102-414 65-282 (300)
89 KOG2984 Predicted hydrolase [G 97.1 0.0017 3.7E-08 60.1 7.6 240 101-414 30-276 (277)
90 PRK07868 acyl-CoA synthetase; 97.1 0.015 3.2E-07 67.1 16.8 57 332-412 299-359 (994)
91 TIGR03230 lipo_lipase lipoprot 97.1 0.0016 3.5E-08 67.8 8.1 81 163-259 73-153 (442)
92 PRK05371 x-prolyl-dipeptidyl a 97.0 0.016 3.6E-07 64.6 16.0 206 162-412 278-517 (767)
93 PLN00021 chlorophyllase 97.0 0.0029 6.3E-08 63.2 8.6 115 115-261 49-167 (313)
94 TIGR00976 /NonD putative hydro 96.9 0.0024 5.3E-08 68.6 8.2 130 100-263 5-135 (550)
95 PF03096 Ndr: Ndr family; Int 96.8 0.0076 1.6E-07 59.0 9.8 209 160-415 52-280 (283)
96 PF00975 Thioesterase: Thioest 96.8 0.0038 8.3E-08 58.4 7.5 102 120-259 2-103 (229)
97 PF06500 DUF1100: Alpha/beta h 96.8 0.0028 6E-08 65.1 6.5 84 162-264 217-300 (411)
98 KOG2931 Differentiation-relate 96.7 0.14 3.1E-06 50.1 17.6 216 160-422 75-314 (326)
99 KOG1838 Alpha/beta hydrolase [ 96.7 0.056 1.2E-06 55.5 15.4 131 93-260 97-236 (409)
100 PF10230 DUF2305: Uncharacteri 96.6 0.017 3.6E-07 56.4 10.4 120 118-263 2-125 (266)
101 COG0657 Aes Esterase/lipase [L 96.4 0.1 2.3E-06 51.5 15.2 46 213-264 150-195 (312)
102 PF03583 LIP: Secretory lipase 96.3 0.1 2.2E-06 51.6 13.9 71 327-417 216-288 (290)
103 PF07859 Abhydrolase_3: alpha/ 96.2 0.017 3.6E-07 53.4 7.5 175 163-396 29-210 (211)
104 PF05448 AXE1: Acetyl xylan es 95.9 0.041 8.8E-07 55.2 9.3 230 94-399 59-308 (320)
105 PF08386 Abhydrolase_4: TAP-li 95.7 0.045 9.8E-07 45.4 7.3 64 331-418 35-98 (103)
106 PF05577 Peptidase_S28: Serine 95.4 0.063 1.4E-06 55.9 9.0 92 163-267 59-155 (434)
107 PF06342 DUF1057: Alpha/beta h 95.4 0.67 1.5E-05 45.5 15.1 249 116-411 33-296 (297)
108 PF05728 UPF0227: Uncharacteri 95.3 0.11 2.4E-06 48.0 9.1 43 211-266 55-97 (187)
109 COG2945 Predicted hydrolase of 95.1 0.11 2.4E-06 48.0 8.4 141 167-412 64-205 (210)
110 TIGR03502 lipase_Pla1_cef extr 94.9 0.084 1.8E-06 58.8 8.4 99 117-234 448-574 (792)
111 PF06821 Ser_hydrolase: Serine 94.7 0.08 1.7E-06 48.2 6.3 43 331-398 115-157 (171)
112 PF07819 PGAP1: PGAP1-like pro 94.6 0.44 9.5E-06 45.3 11.3 122 117-263 3-127 (225)
113 PF08840 BAAT_C: BAAT / Acyl-C 94.4 0.01 2.2E-07 55.9 -0.3 47 203-260 10-56 (213)
114 COG0429 Predicted hydrolase of 94.0 3.7 8E-05 41.2 16.6 124 101-259 60-185 (345)
115 PRK10252 entF enterobactin syn 94.0 0.32 6.8E-06 57.4 10.9 103 118-259 1068-1170(1296)
116 KOG2281 Dipeptidyl aminopeptid 93.7 1.3 2.8E-05 47.9 13.4 205 103-396 624-848 (867)
117 PLN02733 phosphatidylcholine-s 93.5 0.18 3.8E-06 52.9 6.8 56 170-235 127-182 (440)
118 PF01764 Lipase_3: Lipase (cla 93.4 0.1 2.2E-06 44.9 4.1 63 193-261 45-107 (140)
119 KOG4627 Kynurenine formamidase 93.3 0.12 2.7E-06 48.2 4.7 72 174-261 102-173 (270)
120 KOG3975 Uncharacterized conser 93.3 0.22 4.7E-06 47.9 6.4 115 116-258 27-145 (301)
121 COG4757 Predicted alpha/beta h 93.3 3.2 7E-05 39.7 14.0 232 119-410 30-279 (281)
122 PF03959 FSH1: Serine hydrolas 93.1 0.058 1.3E-06 50.6 2.2 187 117-402 3-209 (212)
123 PF06028 DUF915: Alpha/beta hy 93.0 1.2 2.7E-05 43.1 11.4 64 330-414 184-255 (255)
124 COG4099 Predicted peptidase [G 92.8 0.95 2.1E-05 44.7 10.1 31 206-236 260-290 (387)
125 cd00312 Esterase_lipase Estera 92.3 0.29 6.2E-06 51.6 6.5 38 196-234 158-195 (493)
126 cd00519 Lipase_3 Lipase (class 92.2 0.24 5.3E-06 46.7 5.3 59 196-262 112-170 (229)
127 cd00741 Lipase Lipase. Lipase 91.9 0.31 6.8E-06 42.9 5.3 60 193-260 9-68 (153)
128 PF02129 Peptidase_S15: X-Pro 91.5 0.2 4.4E-06 48.6 4.0 84 163-264 57-140 (272)
129 PF01738 DLH: Dienelactone hyd 91.3 0.72 1.6E-05 42.9 7.3 43 332-394 147-189 (218)
130 PLN02454 triacylglycerol lipas 91.1 0.42 9E-06 49.4 5.9 68 192-262 206-273 (414)
131 PF00151 Lipase: Lipase; Inte 91.1 0.045 9.7E-07 55.2 -1.1 104 116-238 69-173 (331)
132 PF12146 Hydrolase_4: Putative 90.9 1.1 2.3E-05 35.4 6.8 79 101-203 1-79 (79)
133 PF05677 DUF818: Chlamydia CHL 90.6 0.78 1.7E-05 46.1 7.1 91 114-229 133-229 (365)
134 smart00824 PKS_TE Thioesterase 90.4 0.98 2.1E-05 40.5 7.3 77 163-259 25-101 (212)
135 KOG2183 Prolylcarboxypeptidase 90.4 0.47 1E-05 48.7 5.4 67 162-232 110-184 (492)
136 COG3319 Thioesterase domains o 90.1 2.2 4.7E-05 41.5 9.6 104 119-261 1-104 (257)
137 PF10142 PhoPQ_related: PhoPQ- 89.3 2.5 5.3E-05 43.3 9.7 66 330-418 262-328 (367)
138 PF05990 DUF900: Alpha/beta hy 89.3 0.9 2E-05 43.4 6.2 72 191-263 68-140 (233)
139 PLN02571 triacylglycerol lipas 88.1 1.1 2.3E-05 46.5 6.2 70 192-262 204-277 (413)
140 PF06057 VirJ: Bacterial virul 87.9 0.92 2E-05 42.0 5.0 63 190-261 46-108 (192)
141 TIGR01849 PHB_depoly_PhaZ poly 86.5 11 0.00024 39.1 12.6 59 332-412 340-404 (406)
142 PLN02719 triacylglycerol lipas 85.0 1.8 3.9E-05 45.8 6.0 72 192-263 273-348 (518)
143 PLN02753 triacylglycerol lipas 84.5 2 4.4E-05 45.6 6.1 74 190-263 285-362 (531)
144 PRK04940 hypothetical protein; 84.0 1.4 3E-05 40.5 4.1 59 191-265 39-97 (180)
145 COG3545 Predicted esterase of 84.0 6.4 0.00014 36.0 8.3 57 331-413 118-178 (181)
146 PF11288 DUF3089: Protein of u 83.9 1.2 2.6E-05 41.9 3.7 42 192-235 74-115 (207)
147 KOG3253 Predicted alpha/beta h 82.4 7 0.00015 42.2 9.0 53 162-225 207-260 (784)
148 PRK10439 enterobactin/ferric e 81.8 14 0.00031 38.4 11.1 58 193-260 264-323 (411)
149 PLN02408 phospholipase A1 81.6 3.1 6.7E-05 42.5 5.9 64 193-261 179-242 (365)
150 KOG4667 Predicted esterase [Li 81.4 10 0.00022 36.1 8.7 183 166-402 65-247 (269)
151 KOG2565 Predicted hydrolases o 81.1 7.6 0.00016 39.7 8.3 130 100-262 132-266 (469)
152 PF09752 DUF2048: Uncharacteri 80.9 18 0.00039 36.7 11.0 32 200-234 163-194 (348)
153 PLN02324 triacylglycerol lipas 80.5 3.7 7.9E-05 42.6 6.1 71 192-263 193-268 (415)
154 PLN02761 lipase class 3 family 80.1 3.7 7.9E-05 43.7 6.1 72 192-263 268-345 (527)
155 KOG4569 Predicted lipase [Lipi 79.8 2.8 6.1E-05 42.3 5.0 61 196-262 155-215 (336)
156 PLN02847 triacylglycerol lipas 79.0 2.8 6.1E-05 45.2 4.8 62 188-257 223-288 (633)
157 PF12740 Chlorophyllase2: Chlo 78.8 6.8 0.00015 38.1 7.1 66 190-260 62-131 (259)
158 PLN02802 triacylglycerol lipas 78.8 3.8 8.1E-05 43.5 5.6 65 193-262 309-373 (509)
159 PF11144 DUF2920: Protein of u 77.9 4.7 0.0001 41.6 5.9 61 192-262 160-221 (403)
160 PLN02310 triacylglycerol lipas 77.4 4.2 9.2E-05 42.0 5.5 65 193-262 186-251 (405)
161 PF11187 DUF2974: Protein of u 77.2 3.8 8.3E-05 38.9 4.8 38 197-238 70-107 (224)
162 PF08237 PE-PPE: PE-PPE domain 77.2 6.4 0.00014 37.4 6.3 86 165-259 4-89 (225)
163 PF03283 PAE: Pectinacetyleste 77.1 16 0.00034 37.4 9.5 133 102-240 35-181 (361)
164 PLN02934 triacylglycerol lipas 76.2 5.3 0.00011 42.4 5.8 40 195-237 304-343 (515)
165 PLN00413 triacylglycerol lipas 75.6 4.2 9.1E-05 42.8 4.9 38 197-237 269-306 (479)
166 PF05057 DUF676: Putative seri 74.4 4.1 8.8E-05 38.3 4.2 49 190-239 54-102 (217)
167 PLN03037 lipase class 3 family 72.4 6.5 0.00014 41.8 5.4 65 194-262 296-361 (525)
168 COG4814 Uncharacterized protei 70.9 79 0.0017 30.9 11.8 74 328-414 214-287 (288)
169 COG2272 PnbA Carboxylesterase 70.3 11 0.00024 39.8 6.5 22 211-232 174-197 (491)
170 TIGR03712 acc_sec_asp2 accesso 68.9 26 0.00056 37.1 8.8 114 102-262 276-392 (511)
171 PLN02162 triacylglycerol lipas 68.8 5.9 0.00013 41.6 4.1 62 197-263 263-325 (475)
172 COG2021 MET2 Homoserine acetyl 66.4 1.6E+02 0.0035 30.2 18.4 61 331-413 307-367 (368)
173 PF06259 Abhydrolase_8: Alpha/ 66.3 14 0.0003 33.9 5.6 67 162-234 62-128 (177)
174 PRK14566 triosephosphate isome 66.2 14 0.0003 36.0 5.9 61 192-263 188-248 (260)
175 COG0627 Predicted esterase [Ge 65.3 17 0.00036 36.5 6.4 130 117-263 52-190 (316)
176 KOG1553 Predicted alpha/beta h 62.5 20 0.00043 36.4 6.2 104 115-258 240-343 (517)
177 PRK14567 triosephosphate isome 62.3 19 0.00042 34.9 6.0 61 192-263 178-238 (253)
178 TIGR01839 PHA_synth_II poly(R) 61.0 2.3E+02 0.005 30.8 14.4 26 333-358 444-469 (560)
179 PF11339 DUF3141: Protein of u 60.3 79 0.0017 34.0 10.4 45 190-236 117-161 (581)
180 PF02450 LCAT: Lecithin:choles 60.2 9.4 0.0002 39.3 3.8 40 193-236 101-140 (389)
181 COG1770 PtrB Protease II [Amin 60.0 1.4E+02 0.003 32.9 12.4 133 211-402 522-664 (682)
182 PF10081 Abhydrolase_9: Alpha/ 58.6 23 0.00051 34.8 5.9 38 190-227 84-121 (289)
183 PF08538 DUF1749: Protein of u 58.2 13 0.00028 37.0 4.1 69 190-264 82-152 (303)
184 PF07519 Tannase: Tannase and 56.4 20 0.00044 38.0 5.6 72 334-418 357-431 (474)
185 PF07224 Chlorophyllase: Chlor 56.1 12 0.00027 36.5 3.5 62 193-262 94-159 (307)
186 KOG3724 Negative regulator of 55.6 15 0.00032 41.1 4.3 93 120-229 91-196 (973)
187 KOG2369 Lecithin:cholesterol a 55.6 19 0.0004 37.9 4.9 68 335-413 378-451 (473)
188 COG1073 Hydrolases of the alph 53.5 34 0.00073 32.1 6.2 61 331-413 233-296 (299)
189 COG4782 Uncharacterized protei 53.0 20 0.00042 36.6 4.5 121 116-264 114-238 (377)
190 KOG2551 Phospholipase/carboxyh 52.5 31 0.00068 32.8 5.5 44 332-400 165-208 (230)
191 KOG2182 Hydrolytic enzymes of 52.4 1.2E+02 0.0025 32.4 10.1 70 163-239 118-192 (514)
192 KOG2237 Predicted serine prote 52.3 2.1E+02 0.0045 31.6 12.1 51 333-396 635-685 (712)
193 PF05576 Peptidase_S37: PS-10 52.2 68 0.0015 33.4 8.2 93 113-231 58-150 (448)
194 PLN02606 palmitoyl-protein thi 52.2 1.8E+02 0.004 29.0 11.0 35 381-418 266-300 (306)
195 KOG1516 Carboxylesterase and r 51.2 55 0.0012 34.9 8.0 25 209-233 187-213 (545)
196 COG2819 Predicted hydrolase of 49.6 1.3E+02 0.0027 29.5 9.3 33 197-229 119-151 (264)
197 KOG3101 Esterase D [General fu 47.6 17 0.00036 34.5 2.8 42 212-263 138-179 (283)
198 PF00756 Esterase: Putative es 47.0 31 0.00067 32.3 4.8 58 195-263 95-153 (251)
199 KOG3079 Uridylate kinase/adeny 46.8 11 0.00024 34.8 1.6 18 116-133 5-22 (195)
200 PLN02429 triosephosphate isome 44.4 50 0.0011 33.1 5.8 61 192-263 238-299 (315)
201 KOG3967 Uncharacterized conser 42.5 46 0.001 31.6 4.9 56 190-259 171-226 (297)
202 PF07389 DUF1500: Protein of u 42.3 21 0.00045 28.7 2.2 36 196-239 7-42 (100)
203 PF05277 DUF726: Protein of un 42.3 57 0.0012 33.2 6.0 62 195-261 201-262 (345)
204 PLN02517 phosphatidylcholine-s 41.9 20 0.00043 39.0 2.7 22 214-235 212-233 (642)
205 COG1505 Serine proteases of th 40.8 3.8E+02 0.0082 29.4 11.9 229 100-409 403-639 (648)
206 PF01083 Cutinase: Cutinase; 40.6 44 0.00094 30.4 4.5 84 165-262 41-125 (179)
207 COG0412 Dienelactone hydrolase 40.2 37 0.00081 32.3 4.1 43 191-234 89-131 (236)
208 PLN02561 triosephosphate isome 40.1 62 0.0013 31.4 5.6 76 165-262 161-239 (253)
209 COG2936 Predicted acyl esteras 40.0 36 0.00078 36.8 4.3 83 163-263 80-162 (563)
210 PF07519 Tannase: Tannase and 39.4 79 0.0017 33.6 6.8 56 195-264 99-154 (474)
211 PF03403 PAF-AH_p_II: Platelet 38.9 18 0.0004 37.1 1.9 37 216-263 229-265 (379)
212 COG5153 CVT17 Putative lipase 38.4 57 0.0012 32.3 5.0 18 211-228 272-289 (425)
213 KOG4540 Putative lipase essent 38.4 57 0.0012 32.3 5.0 18 211-228 272-289 (425)
214 COG3150 Predicted esterase [Ge 38.1 51 0.0011 30.1 4.3 58 190-267 41-98 (191)
215 PLN03082 Iron-sulfur cluster a 37.3 17 0.00037 32.9 1.2 63 116-179 76-144 (163)
216 cd00311 TIM Triosephosphate is 36.9 89 0.0019 30.1 6.1 74 166-262 158-234 (242)
217 PF05049 IIGP: Interferon-indu 36.2 24 0.00053 36.2 2.2 59 116-176 32-97 (376)
218 COG3946 VirJ Type IV secretory 35.7 63 0.0014 33.6 5.0 49 189-240 303-351 (456)
219 COG3673 Uncharacterized conser 32.3 40 0.00087 33.9 2.9 68 163-236 65-143 (423)
220 PRK00042 tpiA triosephosphate 31.5 1.3E+02 0.0027 29.2 6.2 76 165-263 161-239 (250)
221 PRK14565 triosephosphate isome 31.0 97 0.0021 29.8 5.3 69 165-263 155-225 (237)
222 COG3571 Predicted hydrolase of 30.6 65 0.0014 29.4 3.7 26 211-236 85-110 (213)
223 COG1075 LipA Predicted acetylt 30.5 60 0.0013 32.7 4.0 45 190-237 105-149 (336)
224 PTZ00333 triosephosphate isome 29.2 1.2E+02 0.0026 29.5 5.6 60 192-262 182-242 (255)
225 COG3243 PhaC Poly(3-hydroxyalk 27.9 7.2E+02 0.016 26.2 11.1 27 332-358 332-358 (445)
226 PF05705 DUF829: Eukaryotic pr 27.8 5E+02 0.011 24.1 13.8 61 331-411 179-240 (240)
227 PRK13962 bifunctional phosphog 27.6 1.1E+02 0.0023 34.0 5.5 61 192-263 574-635 (645)
228 COG4425 Predicted membrane pro 26.8 84 0.0018 33.1 4.2 37 191-227 373-409 (588)
229 COG4188 Predicted dienelactone 26.5 59 0.0013 33.2 3.1 23 212-234 156-178 (365)
230 PF00681 Plectin: Plectin repe 26.5 38 0.00083 23.4 1.3 34 256-289 10-43 (45)
231 COG3596 Predicted GTPase [Gene 26.4 86 0.0019 31.0 4.0 62 116-180 36-102 (296)
232 PF06309 Torsin: Torsin; Inte 25.8 49 0.0011 28.6 2.0 20 115-134 49-68 (127)
233 COG0218 Predicted GTPase [Gene 25.8 1.1E+02 0.0024 28.7 4.5 62 115-180 20-85 (200)
234 TIGR01911 HesB_rel_seleno HesB 25.6 59 0.0013 26.3 2.4 57 120-177 28-89 (92)
235 KOG3043 Predicted hydrolase re 25.3 1.3E+02 0.0028 28.9 4.8 25 333-357 167-191 (242)
236 KOG2624 Triglyceride lipase-ch 23.6 8.5E+02 0.018 25.3 12.4 27 331-357 333-359 (403)
237 KOG3877 NADH:ubiquinone oxidor 23.4 95 0.0021 30.8 3.7 48 162-227 69-116 (393)
238 TIGR03282 methan_mark_13 putat 22.6 6.7E+02 0.014 25.6 9.6 18 382-399 279-296 (352)
239 PRK11190 Fe/S biogenesis prote 22.3 1.3E+02 0.0029 27.8 4.4 63 120-183 25-95 (192)
240 PF15253 STIL_N: SCL-interrupt 21.8 89 0.0019 32.4 3.3 35 89-126 200-235 (410)
241 PF14020 DUF4236: Protein of u 21.7 1.2E+02 0.0026 22.3 3.1 15 165-180 40-54 (55)
242 KOG1643 Triosephosphate isomer 20.9 1.9E+02 0.0042 27.2 5.0 82 157-263 153-238 (247)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-98 Score=764.78 Aligned_cols=350 Identities=53% Similarity=0.953 Sum_probs=321.4
Q ss_pred hhccCCceecCCCCCCCCCceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEc
Q 041833 68 AQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK 147 (427)
Q Consensus 68 ~~~~~~~v~~Lpg~~~~~~~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~ 147 (427)
...++++|+.|||++.+++|++|||||+|+++.+++|||||+||+++|+++||||||||||||||+. |+|.|+|||+|+
T Consensus 23 ~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v~ 101 (454)
T KOG1282|consen 23 HVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRVK 101 (454)
T ss_pred ccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEEc
Confidence 3467889999999999999999999999999889999999999999999999999999999999998 999999999999
Q ss_pred CCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCcc
Q 041833 148 PDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGH 227 (427)
Q Consensus 148 ~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~ 227 (427)
.||.+|..|+|||||.||||||||||||||||++++.++.+ +|+.+|+|+++||++||++||+|++|||||+|||||||
T Consensus 102 ~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~~-~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~ 180 (454)
T KOG1282|consen 102 YNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYKT-GDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGH 180 (454)
T ss_pred CCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCcC-CcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccce
Confidence 99999999999999999999999999999999999888874 99999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCC-----CCCchh
Q 041833 228 YVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF-----VHPSSS 302 (427)
Q Consensus 228 yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~-----~~~~~~ 302 (427)
|||+||++|++.|++...+.|||||++||||++|+..+..++.+|+|.||+|++++++.+++.|..... ...+..
T Consensus 181 YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~~~~~~~~~~~~ 260 (454)
T KOG1282|consen 181 YVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSDNYANVDPSNTK 260 (454)
T ss_pred ehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcccccccCCchhH
Confidence 999999999999976556789999999999999999999999999999999999999999999988431 133678
Q ss_pred HHHHHHHHH-hhcCCccccccccc--------------c-----------------------------------------
Q 041833 303 CDKVLEVAD-NELGNIDQYNRDLL--------------T----------------------------------------- 326 (427)
Q Consensus 303 C~~~~~~~~-~~~g~in~Ydi~~p--------------~----------------------------------------- 326 (427)
|..+++.+. ...++++.|+++.+ +
T Consensus 261 C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~~~~~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~~Cn~~v 340 (454)
T KOG1282|consen 261 CNKAVEEFDSKTTGDIDNYYILTPDCYPTSYELKKPTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWERCNDEV 340 (454)
T ss_pred HHHHHHHHHHHHhccCchhhhcchhhccccccccccccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCcccccChhh
Confidence 999988877 44455655554322 0
Q ss_pred ----------ccc--------c-cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeC-CceeeeeeeecCeEEE
Q 041833 327 ----------FLV--------L-FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDE-GQVGGWTQEYSGLTFV 386 (427)
Q Consensus 327 ----------~lp--------~-i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~-~~v~Gy~k~y~~Ltfv 386 (427)
|+| . +|+|||+||+|.+||+.||++|+++|++..+++|+||+++ +|||||+++|+||+|+
T Consensus 341 ~~~~~~~~~sm~p~~~~~~~~~~~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~ 420 (454)
T KOG1282|consen 341 NYNYNDDIKSMLPIHKKLIASGGYRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFA 420 (454)
T ss_pred hcccccCccchHHHHHHHhhcCceEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEE
Confidence 222 2 6778999999999999999999999999999999999996 8999999999999999
Q ss_pred EECCCCCcCCcCCcHHHHHHHHHHHcCCCCCCC
Q 041833 387 TVRGAGHEVPLHRPKPALTLIKSFLSGRSMPCL 419 (427)
Q Consensus 387 ~V~gAGHmvP~dqPe~~~~mi~~fL~g~~l~~~ 419 (427)
||+|||||||.|||+++++||++||.|++++..
T Consensus 421 tVrGaGH~VP~~~p~~al~m~~~fl~g~~l~~~ 453 (454)
T KOG1282|consen 421 TVRGAGHMVPYDKPESALIMFQRFLNGQPLPST 453 (454)
T ss_pred EEeCCcccCCCCCcHHHHHHHHHHHcCCCCCCC
Confidence 999999999999999999999999999999864
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=1.1e-87 Score=691.73 Aligned_cols=345 Identities=34% Similarity=0.621 Sum_probs=301.1
Q ss_pred hhccCCceecCCCCCCCCCceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEc
Q 041833 68 AQQKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK 147 (427)
Q Consensus 68 ~~~~~~~v~~Lpg~~~~~~~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~ 147 (427)
++++.+.|+.|||+.+++++++|||||+|+++.+++|||||||++.+|+++||+|||||||||||+. |+|.|+|||+++
T Consensus 18 ~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~~-g~f~e~GP~~~~ 96 (437)
T PLN02209 18 HVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCLS-GLFFENGPLALK 96 (437)
T ss_pred cCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHhh-hHHHhcCCceec
Confidence 4578889999999988999999999999988778899999999999999999999999999999997 999999999998
Q ss_pred CCC-----CceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecC
Q 041833 148 PDG-----KTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGE 222 (427)
Q Consensus 148 ~~~-----~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GE 222 (427)
.++ .++..|++||++.|||||||||+||||||..++..+. +++++|+|+++||++||++||+|+.+||||+||
T Consensus 97 ~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GE 174 (437)
T PLN02209 97 NKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIERT--SDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGD 174 (437)
T ss_pred cCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhCccccCCCEEEEec
Confidence 763 4799999999999999999999999999987665553 567788999999999999999999999999999
Q ss_pred CcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCC--CCCc
Q 041833 223 SYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF--VHPS 300 (427)
Q Consensus 223 SYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~--~~~~ 300 (427)
||||||||.+|++|+++|++..+.+||||||+||||++|+..+...+++|++.+|+|++++++.+++.|..... ...+
T Consensus 175 SYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~~~~~~~ 254 (437)
T PLN02209 175 SYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYFSVDPSN 254 (437)
T ss_pred CcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccccCCCCh
Confidence 99999999999999998865556789999999999999999999999999999999999999999999865321 1234
Q ss_pred hhHHHHHHHHHhhcCCccccccc-----------------------------ccc-------------------------
Q 041833 301 SSCDKVLEVADNELGNIDQYNRD-----------------------------LLT------------------------- 326 (427)
Q Consensus 301 ~~C~~~~~~~~~~~g~in~Ydi~-----------------------------~p~------------------------- 326 (427)
..|..+++.+......++.|++. .+.
T Consensus 255 ~~C~~~i~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~~~~~~~~~ 334 (437)
T PLN02209 255 KKCLKLVEEYHKCTDNINSHHTLIANCDDSNTQHISPDCYYYPYHLVECWANNESVREALHVDKGSIGEWIRDHRGIPYK 334 (437)
T ss_pred HHHHHHHHHHHHHhhcCCccccccccccccccccCCCCcccccHHHHHHHhCCHHHHHHhCCCCCCCCCCccccchhhcc
Confidence 56776655433222222211100 000
Q ss_pred -------------cccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecC-eEEEEECCCC
Q 041833 327 -------------FLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAG 392 (427)
Q Consensus 327 -------------~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~-Ltfv~V~gAG 392 (427)
++..+|+|||+||.|.+||+.|+++|+++|+|+++.+|++|+++++++||+|+|+| |||++|+|||
T Consensus 335 ~d~~~~~~~~~~~l~~girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AG 414 (437)
T PLN02209 335 SDIRSSIPYHMNNSINGYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGG 414 (437)
T ss_pred cchhhhHHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCC
Confidence 12357889999999999999999999999999999999999999999999999996 9999999999
Q ss_pred CcCCcCCcHHHHHHHHHHHcCCCC
Q 041833 393 HEVPLHRPKPALTLIKSFLSGRSM 416 (427)
Q Consensus 393 HmvP~dqPe~~~~mi~~fL~g~~l 416 (427)
|||| +||+++++||++||.+++|
T Consensus 415 HmVp-~qP~~al~m~~~fi~~~~l 437 (437)
T PLN02209 415 HTAE-YLPEESSIMFQRWISGQPL 437 (437)
T ss_pred CCcC-cCHHHHHHHHHHHHcCCCC
Confidence 9998 6999999999999999875
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=9.2e-87 Score=684.69 Aligned_cols=343 Identities=34% Similarity=0.643 Sum_probs=305.8
Q ss_pred ccCCceecCCCCCCCCCceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCC
Q 041833 70 QKLDRVGKLPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPD 149 (427)
Q Consensus 70 ~~~~~v~~Lpg~~~~~~~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~ 149 (427)
.+.+.|++|||+.+++++++|||||+|+++.+.+|||||+|++++|+++|+||||||||||||+. |+|+|+|||+++.+
T Consensus 18 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~~-g~~~e~GP~~~~~~ 96 (433)
T PLN03016 18 DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCLG-GIIFENGPVGLKFE 96 (433)
T ss_pred cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHHH-HHHHhcCCceeecc
Confidence 45688999999988899999999999987777899999999999999999999999999999997 99999999998643
Q ss_pred -----CCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCc
Q 041833 150 -----GKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESY 224 (427)
Q Consensus 150 -----~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESY 224 (427)
+.++..|++||++.|||||||||+||||||+.++..+. +++++|+++++||++||++||+|+.+||||+||||
T Consensus 97 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~~--~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 174 (433)
T PLN03016 97 VFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY 174 (433)
T ss_pred ccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCcc--CCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCc
Confidence 35899999999999999999999999999987665543 67778899999999999999999999999999999
Q ss_pred CccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCC--CCCchh
Q 041833 225 GGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF--VHPSSS 302 (427)
Q Consensus 225 GG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~--~~~~~~ 302 (427)
||||||.+|++|+++|.+..+.+|||||++||||++++..+..++.+|++.+|+|++++++.+++.|..... ..++..
T Consensus 175 aG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~~~~~~~~~ 254 (433)
T PLN03016 175 SGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQ 254 (433)
T ss_pred cceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccccCCCchHH
Confidence 999999999999998865556789999999999999999999999999999999999999999999975432 134667
Q ss_pred HHHHHHHHHhhcCCccccccccc----------------c----------------------------------------
Q 041833 303 CDKVLEVADNELGNIDQYNRDLL----------------T---------------------------------------- 326 (427)
Q Consensus 303 C~~~~~~~~~~~g~in~Ydi~~p----------------~---------------------------------------- 326 (427)
|..+++.+....+.++.||++.+ .
T Consensus 255 C~~~~~~~~~~~~~~n~yni~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~cn~~v~~~~d~~ 334 (433)
T PLN03016 255 CLKLTEEYHKCTAKINIHHILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIV 334 (433)
T ss_pred HHHHHHHHHHHhcCCChhhccCCcccccccCCCcccccchHHHHHHhCCHHHHHHhCCCCCCCCCCccCCcccccccccc
Confidence 98888776666666666555411 0
Q ss_pred ---------cccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecC-eEEEEECCCCCcCC
Q 041833 327 ---------FLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVP 396 (427)
Q Consensus 327 ---------~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~-Ltfv~V~gAGHmvP 396 (427)
++..+|+|||+||.|.+||+.|+++|+++|+|++..+|++|+++++++||+|+|++ |||++|++||||||
T Consensus 335 ~~~~~~~~~l~~~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp 414 (433)
T PLN03016 335 SSIPYHMNNSISGYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE 414 (433)
T ss_pred hhhHHHHHHHhcCceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC
Confidence 11347888999999999999999999999999999999999999999999999986 99999999999998
Q ss_pred cCCcHHHHHHHHHHHcCCCC
Q 041833 397 LHRPKPALTLIKSFLSGRSM 416 (427)
Q Consensus 397 ~dqPe~~~~mi~~fL~g~~l 416 (427)
+||+++++||++||.+++|
T Consensus 415 -~qP~~al~m~~~Fi~~~~l 433 (433)
T PLN03016 415 -YRPNETFIMFQRWISGQPL 433 (433)
T ss_pred -CCHHHHHHHHHHHHcCCCC
Confidence 7999999999999999875
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=3.5e-86 Score=678.47 Aligned_cols=333 Identities=43% Similarity=0.792 Sum_probs=286.0
Q ss_pred CCCCCCCCceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCC-CceeeCC
Q 041833 79 PGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDG-KTLYLNP 157 (427)
Q Consensus 79 pg~~~~~~~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~-~~l~~n~ 157 (427)
||+..++++++|||||+|+++.+.+|||||||++++|+++||||||||||||||+. |+|+|+|||+++.++ .++..|+
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~~-g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSMW-GLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-THH-HHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceecccc-ccccccCceEEeecccccccccc
Confidence 88888899999999999997778999999999999999999999999999999998 999999999999554 7999999
Q ss_pred CCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 158 YSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 158 ~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
+||++.+||||||||+||||||..+..++.+ +++++|+|+++||++|+.+||+++++||||+||||||+|||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~-~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDYVW-NDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGGS--SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccccc-hhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 9999999999999999999999987766553 899999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhcc-CCCCCchhHHHHHHHHHh----
Q 041833 238 RHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYE-SFVHPSSSCDKVLEVADN---- 312 (427)
Q Consensus 238 ~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~-~~~~~~~~C~~~~~~~~~---- 312 (427)
+++.......||||||+||||++|+..+..++.+|++.+|+|+++.++.+.+.|... ........|.++.+.+..
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 238 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACPQCQKAITECAAALDELSCQYAI 238 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSHSSSCCHHHHHHHHHHHHHHCHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccccccchhhHHHHHHHhhhhhccc
Confidence 999765557999999999999999999999999999999999999999999999754 223566789988877665
Q ss_pred --hcCCcccccccccc----------------------------------------------------------------
Q 041833 313 --ELGNIDQYNRDLLT---------------------------------------------------------------- 326 (427)
Q Consensus 313 --~~g~in~Ydi~~p~---------------------------------------------------------------- 326 (427)
..+++|.||++.++
T Consensus 239 ~~~~~~~n~Ydi~~~~~~~~~~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~~V~~~~~~~d~~~~ 318 (415)
T PF00450_consen 239 SQCNGGINPYDIRQPCYNPSRSSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCNDAVNFNWLYDDFMPS 318 (415)
T ss_dssp HHHHTTSETTSTTSEETT-SHCTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-HHHHHHCCTCCC-SB
T ss_pred ccccCCcceeeeeccccccccccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCccccccccccccccc
Confidence 34788888887321
Q ss_pred -------cccc-cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeee--CCceeeeeeeecCeEEEEECCCCCcCC
Q 041833 327 -------FLVL-FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYD--EGQVGGWTQEYSGLTFVTVRGAGHEVP 396 (427)
Q Consensus 327 -------~lp~-i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~--~~~v~Gy~k~y~~Ltfv~V~gAGHmvP 396 (427)
+|.. +|+|||+||.|++||+.|+++|+++|+|+++++|++|.. +++++||+|+++||||++|++||||||
T Consensus 319 ~~~~l~~lL~~~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP 398 (415)
T PF00450_consen 319 SIPDLPELLDNGIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVP 398 (415)
T ss_dssp CHHHHHHHHHTT-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHH
T ss_pred chhhhhhhhhccceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccCh
Confidence 2322 778899999999999999999999999999999999998 899999999999999999999999999
Q ss_pred cCCcHHHHHHHHHHHcC
Q 041833 397 LHRPKPALTLIKSFLSG 413 (427)
Q Consensus 397 ~dqPe~~~~mi~~fL~g 413 (427)
+|||+++++||++||+|
T Consensus 399 ~dqP~~a~~m~~~fl~g 415 (415)
T PF00450_consen 399 QDQPEAALQMFRRFLKG 415 (415)
T ss_dssp HHSHHHHHHHHHHHHCT
T ss_pred hhCHHHHHHHHHHHhcC
Confidence 99999999999999986
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=4.3e-78 Score=626.87 Aligned_cols=334 Identities=30% Similarity=0.579 Sum_probs=287.2
Q ss_pred CCCCCCCCceEEEeeEEecC-CCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCC
Q 041833 79 PGQNFNVNFAHYSGYVTVNE-ESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNP 157 (427)
Q Consensus 79 pg~~~~~~~~~~sGy~~v~~-~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~ 157 (427)
..-..+.++++|+|||+|++ ..+.+|||||||++++|+++||||||||||||||+. |+|+|+|||+++.++.++..|+
T Consensus 37 ~~~~~~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~~-G~f~E~GP~~i~~~~~~~~~n~ 115 (462)
T PTZ00472 37 GWAPCDPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSMF-ALLAENGPCLMNETTGDIYNNT 115 (462)
T ss_pred CccccCCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHHH-hhhccCCCeEEeCCCCceeECC
Confidence 33335567899999999975 457899999999999999999999999999999997 9999999999999988999999
Q ss_pred CCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 158 YSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 158 ~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
+||++.+||||||||+||||||+... ++. .+++++|+|+++||+.|+++||+++.+||||+||||||+|+|.+|.+|+
T Consensus 116 ~sW~~~~~~l~iDqP~G~G~S~~~~~-~~~-~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~ 193 (462)
T PTZ00472 116 YSWNNEAYVIYVDQPAGVGFSYADKA-DYD-HNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRIN 193 (462)
T ss_pred cccccccCeEEEeCCCCcCcccCCCC-CCC-CChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHH
Confidence 99999999999999999999998653 444 3789999999999999999999999999999999999999999999999
Q ss_pred HhhhhcCCcceecceeeeccCccCcccccchhhhHhhh-------cccCCHHHHHHHHH---hhh-------ccCCCCCc
Q 041833 238 RHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWS-------AGLISDDTYKQLNL---LCD-------YESFVHPS 300 (427)
Q Consensus 238 ~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~-------~glI~~~~~~~l~~---~C~-------~~~~~~~~ 300 (427)
++|+.....+||||||+||||++||..|..++.+|++. +++|++++++.+.+ .|. ... ....
T Consensus 194 ~~n~~~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~~~~~~c~~~~-~~~~ 272 (462)
T PTZ00472 194 MGNKKGDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQKKIKECNSNP-DDAD 272 (462)
T ss_pred hhccccCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHHHHHHhccccC-CCcc
Confidence 99876556789999999999999999999999999985 47999999888764 343 211 1123
Q ss_pred hhHHHHHHHHHh-----hcCCcccccccccc-------------------------------------------------
Q 041833 301 SSCDKVLEVADN-----ELGNIDQYNRDLLT------------------------------------------------- 326 (427)
Q Consensus 301 ~~C~~~~~~~~~-----~~g~in~Ydi~~p~------------------------------------------------- 326 (427)
..|..+...|.. ..+++|.|||+.++
T Consensus 273 ~~c~~a~~~c~~~~~~~~~~g~n~Ydi~~~c~~~~c~~~~~~~~yLN~~~Vq~AL~v~~~~w~~c~~~V~~~~~~D~~~~ 352 (462)
T PTZ00472 273 SSCSVARALCNEYIAVYSATGLNNYDIRKPCIGPLCYNMDNTIAFMNREDVQSSLGVKPATWQSCNMEVNLMFEMDWMKN 352 (462)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCChhheeccCCCCCccCHHHHHHHhCCHHHHHHhCCCCCCceeCCHHHHHHhhhccccc
Confidence 345444332221 13678999988531
Q ss_pred -------ccc-ccceeEEeCCCCcccChhhHHHHHHhcCCCCC-----ccceee-eeCCceeeeeeeec-----CeEEEE
Q 041833 327 -------FLV-LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTV-----KPWRAW-YDEGQVGGWTQEYS-----GLTFVT 387 (427)
Q Consensus 327 -------~lp-~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~-----~~~~~w-~~~~~v~Gy~k~y~-----~Ltfv~ 387 (427)
+|. .+|+|||+||.|.+||+.|+++|+++|+|++. ++|++| +++++++||+|+|+ ||+|++
T Consensus 353 ~~~~l~~LL~~gikVLiYnGd~D~icn~~Gt~~wi~~L~w~g~~~f~~a~~~~w~~~~~~v~G~vk~~~~~~~~~l~~~~ 432 (462)
T PTZ00472 353 FNYTVPGLLEDGVRVMIYAGDMDFICNWIGNKAWTLALQWPGNAEFNAAPDVPFSAVDGRWAGLVRSAASNTSSGFSFVQ 432 (462)
T ss_pred hHHHHHHHHhcCceEEEEECCcCeecCcHhHHHHHHhCCCCCccchhhcCccccEecCCEeceEEEEEecccCCCeEEEE
Confidence 222 47888999999999999999999999999986 456899 56899999999999 999999
Q ss_pred ECCCCCcCCcCCcHHHHHHHHHHHcCCCC
Q 041833 388 VRGAGHEVPLHRPKPALTLIKSFLSGRSM 416 (427)
Q Consensus 388 V~gAGHmvP~dqPe~~~~mi~~fL~g~~l 416 (427)
|++||||||+|||+++++||++|+.++++
T Consensus 433 V~~AGH~vp~d~P~~~~~~i~~fl~~~~~ 461 (462)
T PTZ00472 433 VYNAGHMVPMDQPAVALTMINRFLRNRPL 461 (462)
T ss_pred ECCCCccChhhHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999999876
No 6
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=8.4e-60 Score=469.43 Aligned_cols=251 Identities=33% Similarity=0.593 Sum_probs=218.4
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
.|||||||||+||||||+.++.++. +++++|+|++.||+.||++||+|+++||||+||||||||||.||++|+++|.+
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~~--~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDKT--GDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCcc--ccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 4899999999999999987665553 67778899999999999999999999999999999999999999999998865
Q ss_pred cCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCC--CCCchhHHHHHHHHHhhcCCcccc
Q 041833 243 TGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESF--VHPSSSCDKVLEVADNELGNIDQY 320 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~--~~~~~~C~~~~~~~~~~~g~in~Y 320 (427)
..+.+||||||+||||++++..+..++.+|++.+|+|++++++.+.+.|..... ..+...|..+++.+....+.++.|
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~ 158 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYYNVDPSNTQCLKLTEEYHKCTAKINIH 158 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCccCCCCCcHHHHHHHHHHHHHHhcCCHh
Confidence 556789999999999999999999999999999999999999999999975322 134567888777666555555554
Q ss_pred ccccc----------------c-------------------------------------------------cccccceeE
Q 041833 321 NRDLL----------------T-------------------------------------------------FLVLFDFLY 335 (427)
Q Consensus 321 di~~p----------------~-------------------------------------------------~lp~i~~Li 335 (427)
+++.+ . ++..+|+||
T Consensus 159 ~~~~~~~~~~~~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~~v~~~~d~~~~~~~~~~~l~~~i~Vli 238 (319)
T PLN02213 159 HILTPDCDVTNVTSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNRTIPYNHDIVSSIPYHMNNSISGYRSLI 238 (319)
T ss_pred hcccCcccCccCCCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCcccccccccccchHHHHHHHhcCceEEE
Confidence 44310 0 113478889
Q ss_pred EeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecC-eEEEEECCCCCcCCcCCcHHHHHHHHHHHcCC
Q 041833 336 DSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKPALTLIKSFLSGR 414 (427)
Q Consensus 336 y~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~-Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~ 414 (427)
|+||.|.+||+.|+++|+++|+|++.++|++|+++++++||+|+|++ |||++|++|||||| +||+++++||++||.++
T Consensus 239 Y~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~~fi~~~ 317 (319)
T PLN02213 239 YSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQRWISGQ 317 (319)
T ss_pred EECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHHHHHcCC
Confidence 99999999999999999999999999999999999999999999986 99999999999998 69999999999999998
Q ss_pred CC
Q 041833 415 SM 416 (427)
Q Consensus 415 ~l 416 (427)
++
T Consensus 318 ~~ 319 (319)
T PLN02213 318 PL 319 (319)
T ss_pred CC
Confidence 65
No 7
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-58 Score=462.96 Aligned_cols=329 Identities=26% Similarity=0.495 Sum_probs=266.8
Q ss_pred CCCCCCCCCceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCC-CCceeeC
Q 041833 78 LPGQNFNVNFAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPD-GKTLYLN 156 (427)
Q Consensus 78 Lpg~~~~~~~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~-~~~l~~n 156 (427)
.|-.-+.+++++|+||.+.. ..+|||+++++++|.++|+||||||||||||+. |+|.|+||.+|+.+ ++.-..|
T Consensus 65 ~~~~~G~lpv~~~~g~~d~e----d~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~~-g~l~elGP~rI~~~~~P~~~~N 139 (498)
T COG2939 65 YPATAGILPVRDYTGYPDAE----DFFFFYTFESPNDPANRPVIFWLNGGPGCSSVT-GLLGELGPKRIQSGTSPSYPDN 139 (498)
T ss_pred cchhccccchhhccCCcccc----eeEEEEEecCCCCCCCCceEEEecCCCChHhhh-hhhhhcCCeeeeCCCCCCCCCC
Confidence 34444456678888884432 239999999999999999999999999999997 99999999999988 4333369
Q ss_pred CCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCC--CeEEecCCcCccchHHHHH
Q 041833 157 PYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGR--DFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 157 ~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~--~~yI~GESYGG~yvP~lA~ 234 (427)
|+||++.++|||||||+|||||++.... .. .+...+.+|++.|++.|++.||++.+. |+||+||||||+|+|.||.
T Consensus 140 P~SW~~~adLvFiDqPvGTGfS~a~~~e-~~-~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~ 217 (498)
T COG2939 140 PGSWLDFADLVFIDQPVGTGFSRALGDE-KK-KDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAH 217 (498)
T ss_pred ccccccCCceEEEecCcccCcccccccc-cc-cchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHH
Confidence 9999999999999999999999973322 33 377889999999999999999999988 9999999999999999999
Q ss_pred HHHHhhhhcCCcceecceeeeccC-ccCcccccchhhhHhhhcc----cCCHHHHHHHHHhhhccCC---------CCCc
Q 041833 235 AIIRHNQATGEKAINLKGYMVGNA-LTDDYHDYLGLFQFWWSAG----LISDDTYKQLNLLCDYESF---------VHPS 300 (427)
Q Consensus 235 ~i~~~~~~~~~~~inLkGi~ign~-~id~~~~~~~~~~f~~~~g----lI~~~~~~~l~~~C~~~~~---------~~~~ 300 (427)
.|++++.. ....+||++++|+|+ +++|..++..+..+++..+ ..+.+.++.+++.|+..+. ....
T Consensus 218 ~L~~~~~~-~~~~~nlssvligng~~t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~ 296 (498)
T COG2939 218 ELLEDNIA-LNGNVNLSSVLIGNGLWTDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSL 296 (498)
T ss_pred HHHHhccc-cCCceEeeeeeecCCcccChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhh
Confidence 99998632 245899999999999 9999999999999988654 4567888888887765321 2334
Q ss_pred hhHHHHHHHHHhhc------C---Ccccccccccc---------------------------------------------
Q 041833 301 SSCDKVLEVADNEL------G---NIDQYNRDLLT--------------------------------------------- 326 (427)
Q Consensus 301 ~~C~~~~~~~~~~~------g---~in~Ydi~~p~--------------------------------------------- 326 (427)
..|..+...+.... . ..|.|+++..+
T Consensus 297 ~~c~~~~~~~~~~~~~~~~r~~~~~~n~y~~r~~~~d~g~~~~~y~~~~~~ld~~~~~~~~~~~~~~~d~~~~c~t~a~~ 376 (498)
T COG2939 297 QPCENASAYLTGLMREYVGRAGGRLLNVYDIREECRDPGLGGSCYDTLSTSLDYFNFDPEQEVNDPEVDNISGCTTDAMT 376 (498)
T ss_pred hHHHHHHHHHHhcchhhhccccccccccccchhhcCCCCcccccccceeeccccccccchhccccccccchhccchHHHH
Confidence 45766655544321 2 37888887332
Q ss_pred --------------------cccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccce-----eeee--CCceeeeeee
Q 041833 327 --------------------FLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWR-----AWYD--EGQVGGWTQE 379 (427)
Q Consensus 327 --------------------~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~-----~w~~--~~~v~Gy~k~ 379 (427)
+...+..+++.||.|.+|++.+++.|..+|+|.+...|. +|.. ..+..|-+++
T Consensus 377 ~f~~~~~~~~~~~~~~~~~~lv~~~~~~~~~gd~d~icn~~~~~a~~~~Lkw~~~~g~~d~~~~~~~~~~t~e~~~~~~s 456 (498)
T COG2939 377 DFLTFTGGWAKPSRYLVLNLLVNNVWILLYAGDKDFICNLRGNMALDPKLKWLGASGYFDASTPFFWSRLTLEEMGGYKS 456 (498)
T ss_pred hhhhhcCCcccccHHHHhhhhhcCCceeeeecCchhHhhhhhhcccCCcceEeeecchhhhcCCCcccccchhhcccccc
Confidence 112244569999999999999999999999999876554 2333 4567777788
Q ss_pred ecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCC
Q 041833 380 YSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGR 414 (427)
Q Consensus 380 y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~ 414 (427)
++|++|+.++.||||||.|+|+.+++|++.|+.+.
T Consensus 457 ~~n~~~~r~y~aGHMvp~d~P~~~~~~~~~~~~~~ 491 (498)
T COG2939 457 YRNLTFLRIYEAGHMVPYDRPESSLEMVNLWINGY 491 (498)
T ss_pred cCCceEEEEecCcceeecCChHHHHHHHHHHHhhc
Confidence 89999999999999999999999999999999874
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.1e-56 Score=423.52 Aligned_cols=313 Identities=25% Similarity=0.430 Sum_probs=260.3
Q ss_pred EEeeEEecCCCCeeEEEEEEeeccC-CCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEE
Q 041833 90 YSGYVTVNEESGRALFYWFVEAVED-PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILF 168 (427)
Q Consensus 90 ~sGy~~v~~~~~~~lFy~f~es~~~-p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlf 168 (427)
-.||++|.. ++++|+|++.+..+ ...+|+.|||+||||.||..+|+|.|+||+..+ +.+|+.+|.|.|+|||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~-----~~~r~~TWlk~adllf 76 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD-----GSPRDWTWLKDADLLF 76 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC-----CCcCCchhhhhccEEE
Confidence 358999965 48999999998754 478999999999999999999999999999864 5789999999999999
Q ss_pred EeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcce
Q 041833 169 LDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAI 248 (427)
Q Consensus 169 iDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~i 248 (427)
||.|||+||||....+.|++ ++++.|.|+.+.|++||..||+|+..||||+.|||||+.++.+|..+.+..+.+ +.+.
T Consensus 77 vDnPVGaGfSyVdg~~~Y~~-~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G-~i~~ 154 (414)
T KOG1283|consen 77 VDNPVGAGFSYVDGSSAYTT-NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRG-EIKL 154 (414)
T ss_pred ecCCCcCceeeecCcccccc-cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcC-ceee
Confidence 99999999999988777764 899999999999999999999999999999999999999999999998887654 6789
Q ss_pred ecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHH---hhhc----cCCCCCchhHHHHHHHHHhhcCCccccc
Q 041833 249 NLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNL---LCDY----ESFVHPSSSCDKVLEVADNELGNIDQYN 321 (427)
Q Consensus 249 nLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~---~C~~----~~~~~~~~~C~~~~~~~~~~~g~in~Yd 321 (427)
|+.||++|++||+|.....++.+|++..+++|+..++...+ .|.. +.+..+...+......+...+.+++.||
T Consensus 155 nf~~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ns~A~k~~~~v~~g~~~~AT~~Wg~~e~li~~~sn~VdfYN 234 (414)
T KOG1283|consen 155 NFIGVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSSNSGAEKGKGGVDGGKWGGATGGWGGGENLISRESNGVDFYN 234 (414)
T ss_pred cceeEEccCcccChhHhhhcchHHHHhhhhhcccCccchhhhHHhhcccccCCccccccccccCcCcceeecccCcceee
Confidence 99999999999999999999999999999999887766553 3322 1111222222223333344455566666
Q ss_pred ccccc-----------------------------------------------------------------------cccc
Q 041833 322 RDLLT-----------------------------------------------------------------------FLVL 330 (427)
Q Consensus 322 i~~p~-----------------------------------------------------------------------~lp~ 330 (427)
|..+. |.|+
T Consensus 235 il~~t~~d~~~~ss~~~~~~~~~~rrl~~~~~~~~~~D~L~~lM~g~vrkkLgIip~~~~wGgqsg~vFt~lq~dFMKPv 314 (414)
T KOG1283|consen 235 ILTKTLGDQYSLSSRAAMTPEEVMRRLLVRFVGDEDRDKLSDLMNGPVRKKLGIIPGGVKWGGQSGDVFTKLQGDFMKPV 314 (414)
T ss_pred eeccCCCcchhhhhhhhcchHHHHHHHHhccCcchhHHHHHHHhcccccccccccCCCCcccCcCCchHHHhhhhhcccH
Confidence 65321 3343
Q ss_pred c-----------ceeEEeCCCCcccChhhHHHHHHhcCCCCCccce--e---eeeCCceeeeeeeecCeEEEEECCCCCc
Q 041833 331 F-----------DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWR--A---WYDEGQVGGWTQEYSGLTFVTVRGAGHE 394 (427)
Q Consensus 331 i-----------~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~--~---w~~~~~v~Gy~k~y~~Ltfv~V~gAGHm 394 (427)
+ ++.||+|++|.||.+.|++.|++.|.|+....++ + .+++...+||.|+|+||.|.+|..||||
T Consensus 315 i~~VdeLL~~Gv~V~VynG~lDlIc~T~G~~AWv~~l~w~~~p~f~~~~r~~~~~s~~l~gy~ktyknl~f~wilraghm 394 (414)
T KOG1283|consen 315 ISKVDELLNNGVNVTVYNGQLDLICATMGTEAWVEKLEWSAKPSFQVSPRVGITVSRVLEGYEKTYKNLSFFWILRAGHM 394 (414)
T ss_pred HHHHHHHHhCCceEEEEecccchhhcccchhhhhhheecCCCCccccceeeeccceeecchhhhhhccceeEEeecccCc
Confidence 3 3349999999999999999999999999976554 2 3456678999999999999999999999
Q ss_pred CCcCCcHHHHHHHHHHH
Q 041833 395 VPLHRPKPALTLIKSFL 411 (427)
Q Consensus 395 vP~dqPe~~~~mi~~fL 411 (427)
||.|+|+.+.+|++-+.
T Consensus 395 vp~Dnp~~a~hmlr~vt 411 (414)
T KOG1283|consen 395 VPADNPAAASHMLRHVT 411 (414)
T ss_pred ccCCCHHHHhhheeecc
Confidence 99999999999998654
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.61 E-value=1.9e-14 Score=135.39 Aligned_cols=227 Identities=17% Similarity=0.148 Sum_probs=131.6
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
.+.|+||++||.+|.+..+ ..+.+ -+.+.++++.+|.| |.|.|.......+ +.++.+
T Consensus 11 ~~~~~iv~lhG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~ 67 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW-APQLD------------------VLTQRFHVVTYDHR-GTGRSPGELPPGY---SIAHMA 67 (257)
T ss_pred CCCCEEEEEcCCCcchhHH-HHHHH------------------HHHhccEEEEEcCC-CCCCCCCCCcccC---CHHHHH
Confidence 4679999999998877665 33322 01235799999998 9999975433333 567778
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhh-hHhh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLF-QFWW 274 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~-~f~~ 274 (427)
+++.+++.. ++..+++|+|+|+||.++..+|.... ..++++++.+++........... ....
T Consensus 68 ~~~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~----------~~v~~~i~~~~~~~~~~~~~~~~~~~~~ 130 (257)
T TIGR03611 68 DDVLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYP----------ERLLSLVLINAWSRPDPHTRRCFDVRIA 130 (257)
T ss_pred HHHHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHCh----------HHhHHheeecCCCCCChhHHHHHHHHHH
Confidence 887777753 34568999999999988888876432 23788888877655422111000 0000
Q ss_pred hcccCCHHHHHH-----------HHHh---hhccCC-CCCchhH-HHHHHHHHhhcCCccccccccccccc--ccceeEE
Q 041833 275 SAGLISDDTYKQ-----------LNLL---CDYESF-VHPSSSC-DKVLEVADNELGNIDQYNRDLLTFLV--LFDFLYD 336 (427)
Q Consensus 275 ~~glI~~~~~~~-----------l~~~---C~~~~~-~~~~~~C-~~~~~~~~~~~g~in~Ydi~~p~~lp--~i~~Liy 336 (427)
.........+.. +.+. +..... ......+ ......+.. ...+++.. .+. ..+.|++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~--~~~~i~~P~l~i 204 (257)
T TIGR03611 131 LLQHAGPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINA----LEAFDVSA--RLDRIQHPVLLI 204 (257)
T ss_pred HHhccCcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHH----HHcCCcHH--HhcccCccEEEE
Confidence 000000000000 0000 000000 0000000 001111100 01111110 111 2457899
Q ss_pred eCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 337 SGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 337 ~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
+|+.|..+|....+++.+.+. +.+++.++++||+.+.++|+...+.|.+||.
T Consensus 205 ~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl~ 256 (257)
T TIGR03611 205 ANRDDMLVPYTQSLRLAAALP------------------------NAQLKLLPYGGHASNVTDPETFNRALLDFLK 256 (257)
T ss_pred ecCcCcccCHHHHHHHHHhcC------------------------CceEEEECCCCCCccccCHHHHHHHHHHHhc
Confidence 999999999988888777553 3367889999999999999999999999985
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.60 E-value=9.7e-14 Score=132.28 Aligned_cols=129 Identities=23% Similarity=0.354 Sum_probs=83.5
Q ss_pred EEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEE
Q 041833 90 YSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFL 169 (427)
Q Consensus 90 ~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfi 169 (427)
..++++++. ..+.|.-+. .+...|.||++|||||++...+..+.+. +. + +.++++.+
T Consensus 3 ~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~~~~-----------l~-~-----~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENLREL-----------LK-E-----EGREVIMY 59 (288)
T ss_pred ccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHHHHH-----------HH-h-----cCCEEEEE
Confidence 345666643 244443322 2334688999999999987653333221 11 1 24889999
Q ss_pred eCCCCcccCcCCCCCC-CccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcce
Q 041833 170 DSPVGVGFSYSNTSSD-ITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAI 248 (427)
Q Consensus 170 DqP~G~GfSy~~~~~~-~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~i 248 (427)
|.| |+|.|....... .. +.+..++++.+++.. +..++++|+|+|+||..+..+|... +.
T Consensus 60 d~~-G~G~s~~~~~~~~~~--~~~~~~~~~~~~~~~-------~~~~~~~liG~S~Gg~ia~~~a~~~----------p~ 119 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDELW--TIDYFVDELEEVREK-------LGLDKFYLLGHSWGGMLAQEYALKY----------GQ 119 (288)
T ss_pred cCC-CCCCCCCCCcccccc--cHHHHHHHHHHHHHH-------cCCCcEEEEEeehHHHHHHHHHHhC----------cc
Confidence 998 999997543222 11 567777777766553 4456799999999998887777632 44
Q ss_pred ecceeeeccCccC
Q 041833 249 NLKGYMVGNALTD 261 (427)
Q Consensus 249 nLkGi~ign~~id 261 (427)
.++++++.++...
T Consensus 120 ~v~~lvl~~~~~~ 132 (288)
T TIGR01250 120 HLKGLIISSMLDS 132 (288)
T ss_pred ccceeeEeccccc
Confidence 5788888887643
No 11
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.57 E-value=3.4e-13 Score=132.73 Aligned_cols=266 Identities=19% Similarity=0.184 Sum_probs=147.2
Q ss_pred CCceecCCCCCCCCCceEEEeeEEecCCCCe--eEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCC
Q 041833 72 LDRVGKLPGQNFNVNFAHYSGYVTVNEESGR--ALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPD 149 (427)
Q Consensus 72 ~~~v~~Lpg~~~~~~~~~~sGy~~v~~~~~~--~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~ 149 (427)
..++..||.+++.. .|+.++...|. +|+|.- .+++ +.|.||.+||.|+.+..+ ..+.+ .
T Consensus 8 ~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~y~~---~G~~-~~~~lvliHG~~~~~~~w-~~~~~---~----- 68 (302)
T PRK00870 8 DSRFENLPDYPFAP------HYVDVDDGDGGPLRMHYVD---EGPA-DGPPVLLLHGEPSWSYLY-RKMIP---I----- 68 (302)
T ss_pred cccccCCcCCCCCc------eeEeecCCCCceEEEEEEe---cCCC-CCCEEEEECCCCCchhhH-HHHHH---H-----
Confidence 45677888877533 57889864343 577652 2233 468899999998777765 33221 0
Q ss_pred CCceeeCCCCccccceEEEEeCCCCcccCcCCCC-CCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccc
Q 041833 150 GKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS-SDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHY 228 (427)
Q Consensus 150 ~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~y 228 (427)
|.. +.++++.+|.| |+|.|..... .++ +.++.++++.++|+. +..++++|+|||+||.+
T Consensus 69 ---L~~------~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~~-------l~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 69 ---LAA------AGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFEQ-------LDLTDVTLVCQDWGGLI 128 (302)
T ss_pred ---HHh------CCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHHH-------cCCCCEEEEEEChHHHH
Confidence 110 24899999998 9999954321 122 567777777776653 45568999999999987
Q ss_pred hHHHHHHHHHhhhhcCCcceecceeeeccCccCcccc-cchhhhHhhh---------------cc---cCCHHHHHHHHH
Q 041833 229 VPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHD-YLGLFQFWWS---------------AG---LISDDTYKQLNL 289 (427)
Q Consensus 229 vP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~-~~~~~~f~~~---------------~g---lI~~~~~~~l~~ 289 (427)
+..+|... +-.++++++.++.+-.... .......... .+ .++++..+.+.+
T Consensus 129 a~~~a~~~----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (302)
T PRK00870 129 GLRLAAEH----------PDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQYSPVLPVGRLVNGGTVRDLSDAVRAAYDA 198 (302)
T ss_pred HHHHHHhC----------hhheeEEEEeCCCCCCccccchHHHhhhhcccccCchhhHHHHhhccccccCCHHHHHHhhc
Confidence 77777642 2347888888764321110 0000000000 00 011111111100
Q ss_pred hhhccCCCCCchhHHHHHHHHHhhc-CCccccccccc----cccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCc
Q 041833 290 LCDYESFVHPSSSCDKVLEVADNEL-GNIDQYNRDLL----TFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVK 362 (427)
Q Consensus 290 ~C~~~~~~~~~~~C~~~~~~~~~~~-g~in~Ydi~~p----~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~ 362 (427)
. ............+.... ........... ..++ .++.||+.|+.|.++|... +++.+.+.-.
T Consensus 199 -----~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~-~~~~~~~~~~--- 267 (302)
T PRK00870 199 -----P--FPDESYKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDSDPITGGGD-AILQKRIPGA--- 267 (302)
T ss_pred -----c--cCChhhhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCCCCcccCch-HHHHhhcccc---
Confidence 0 00000000000000000 00000000000 0011 1346899999999999755 5555544311
Q ss_pred cceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCCC
Q 041833 363 PWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGRS 415 (427)
Q Consensus 363 ~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~~ 415 (427)
.+.+++.++++||++++++|+.+.+.|.+||...|
T Consensus 268 ------------------~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl~~~~ 302 (302)
T PRK00870 268 ------------------AGQPHPTIKGAGHFLQEDSGEELAEAVLEFIRATP 302 (302)
T ss_pred ------------------cccceeeecCCCccchhhChHHHHHHHHHHHhcCC
Confidence 12246889999999999999999999999998764
No 12
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.54 E-value=5.1e-13 Score=130.74 Aligned_cols=249 Identities=16% Similarity=0.134 Sum_probs=140.9
Q ss_pred eEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCC
Q 041833 93 YVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 172 (427)
Q Consensus 93 y~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP 172 (427)
|++++ +.+++|.-. .+ ..|.||+|||.++.+..+ -.+.+ . +.+.+++|.+|.|
T Consensus 12 ~~~~~---~~~i~y~~~----G~-~~~~vlllHG~~~~~~~w-~~~~~-----------~-------L~~~~~vi~~Dlp 64 (294)
T PLN02824 12 TWRWK---GYNIRYQRA----GT-SGPALVLVHGFGGNADHW-RKNTP-----------V-------LAKSHRVYAIDLL 64 (294)
T ss_pred eEEEc---CeEEEEEEc----CC-CCCeEEEECCCCCChhHH-HHHHH-----------H-------HHhCCeEEEEcCC
Confidence 66664 346665421 11 247899999999988886 44433 1 2345699999998
Q ss_pred CCcccCcCCCCCC----CccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcce
Q 041833 173 VGVGFSYSNTSSD----ITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAI 248 (427)
Q Consensus 173 ~G~GfSy~~~~~~----~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~i 248 (427)
|.|.|....... .. .+.++.|+|+.++|.. +..++++|+|+|+||..+-.+|.+. +.
T Consensus 65 -G~G~S~~~~~~~~~~~~~-~~~~~~a~~l~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----------p~ 125 (294)
T PLN02824 65 -GYGYSDKPNPRSAPPNSF-YTFETWGEQLNDFCSD-------VVGDPAFVICNSVGGVVGLQAAVDA----------PE 125 (294)
T ss_pred -CCCCCCCCcccccccccc-CCHHHHHHHHHHHHHH-------hcCCCeEEEEeCHHHHHHHHHHHhC----------hh
Confidence 999997543211 11 2677888888888874 3457899999999998887777643 33
Q ss_pred ecceeeeccCccCcccc--c----chhhhHhh---hcc---------cCCHHHHHHHHHhhhccCCCCCchhHHHH----
Q 041833 249 NLKGYMVGNALTDDYHD--Y----LGLFQFWW---SAG---------LISDDTYKQLNLLCDYESFVHPSSSCDKV---- 306 (427)
Q Consensus 249 nLkGi~ign~~id~~~~--~----~~~~~f~~---~~g---------lI~~~~~~~l~~~C~~~~~~~~~~~C~~~---- 306 (427)
.++++++.|+....... . ......+. ... +........+...+-..............
T Consensus 126 ~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (294)
T PLN02824 126 LVRGVMLINISLRGLHIKKQPWLGRPFIKAFQNLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPG 205 (294)
T ss_pred heeEEEEECCCcccccccccchhhhHHHHHHHHHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhcc
Confidence 48899998876422100 0 00000000 000 00111111111111000000000000000
Q ss_pred -----HHHHHhhcCCccccccccccccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeee
Q 041833 307 -----LEVADNELGNIDQYNRDLLTFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQE 379 (427)
Q Consensus 307 -----~~~~~~~~g~in~Ydi~~p~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~ 379 (427)
......... ...+.... ..++ ..+.||++|..|.++|....++..+.++
T Consensus 206 ~~~~~~~~~~~~~~-~~~~~~~~-~~l~~i~~P~lvi~G~~D~~~~~~~~~~~~~~~~---------------------- 261 (294)
T PLN02824 206 LEPGAVDVFLDFIS-YSGGPLPE-ELLPAVKCPVLIAWGEKDPWEPVELGRAYANFDA---------------------- 261 (294)
T ss_pred CCchHHHHHHHHhc-cccccchH-HHHhhcCCCeEEEEecCCCCCChHHHHHHHhcCC----------------------
Confidence 000000000 00000000 0222 2457899999999999987777434332
Q ss_pred ecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 380 YSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 380 y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
+.+++.|.+|||+++.++|+.+.+.|.+||.+
T Consensus 262 --~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl~~ 293 (294)
T PLN02824 262 --VEDFIVLPGVGHCPQDEAPELVNPLIESFVAR 293 (294)
T ss_pred --ccceEEeCCCCCChhhhCHHHHHHHHHHHHhc
Confidence 23678999999999999999999999999965
No 13
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.53 E-value=9.2e-13 Score=125.32 Aligned_cols=226 Identities=17% Similarity=0.166 Sum_probs=133.5
Q ss_pred cCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChH
Q 041833 113 EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDK 192 (427)
Q Consensus 113 ~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~ 192 (427)
..+.++|.||++||.+|.+..+ ..+.+. +.+.+++|.+|.| |.|.|.... .+ +.+
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~~-~~~~~~------------------l~~~~~vi~~D~~-G~G~s~~~~--~~---~~~ 65 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDNL-GVLARD------------------LVNDHDIIQVDMR-NHGLSPRDP--VM---NYP 65 (255)
T ss_pred CCCCCCCCEEEECCCCCchhHH-HHHHHH------------------HhhCCeEEEECCC-CCCCCCCCC--CC---CHH
Confidence 4567789999999999888775 444331 2245799999998 999997432 22 677
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc-Ccc-cccchhh
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT-DDY-HDYLGLF 270 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i-d~~-~~~~~~~ 270 (427)
+.++|+.++|.. +..++++|+|+|+||..+..+|.+. +..++++++.++.. +.. .......
T Consensus 66 ~~~~d~~~~l~~-------l~~~~~~lvGhS~Gg~va~~~a~~~----------~~~v~~lvli~~~~~~~~~~~~~~~~ 128 (255)
T PRK10673 66 AMAQDLLDTLDA-------LQIEKATFIGHSMGGKAVMALTALA----------PDRIDKLVAIDIAPVDYHVRRHDEIF 128 (255)
T ss_pred HHHHHHHHHHHH-------cCCCceEEEEECHHHHHHHHHHHhC----------HhhcceEEEEecCCCCccchhhHHHH
Confidence 889999998874 3446799999999998888777643 33478888765421 110 0000000
Q ss_pred h---HhhhcccCCHHH-HHHHHHhhhcc--------CCCCC-ch-hHHHHHHHHHhhcCCccccccccccccc--cccee
Q 041833 271 Q---FWWSAGLISDDT-YKQLNLLCDYE--------SFVHP-SS-SCDKVLEVADNELGNIDQYNRDLLTFLV--LFDFL 334 (427)
Q Consensus 271 ~---f~~~~glI~~~~-~~~l~~~C~~~--------~~~~~-~~-~C~~~~~~~~~~~g~in~Ydi~~p~~lp--~i~~L 334 (427)
. .....+..+.+. .+.+....... ..... .. ........... +..++ .++ ..+.|
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~P~l 199 (255)
T PRK10673 129 AAINAVSEAGATTRQQAAAIMRQHLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPH----IVGWE-----KIPAWPHPAL 199 (255)
T ss_pred HHHHHhhhcccccHHHHHHHHHHhcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHH----HhCCc-----ccCCCCCCeE
Confidence 0 000111111111 11111100000 00000 00 00000000000 00111 111 13578
Q ss_pred EEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 335 YDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 335 iy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
++.|+.|..++....+.+.+.++ +.+++++.++||+.+.++|+...++|.+||..
T Consensus 200 ~i~G~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl~~ 254 (255)
T PRK10673 200 FIRGGNSPYVTEAYRDDLLAQFP------------------------QARAHVIAGAGHWVHAEKPDAVLRAIRRYLND 254 (255)
T ss_pred EEECCCCCCCCHHHHHHHHHhCC------------------------CcEEEEeCCCCCeeeccCHHHHHHHHHHHHhc
Confidence 99999999999877777766442 45789999999999999999999999999975
No 14
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.53 E-value=7.3e-13 Score=132.08 Aligned_cols=269 Identities=17% Similarity=0.136 Sum_probs=151.6
Q ss_pred EeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEE
Q 041833 91 SGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFL 169 (427)
Q Consensus 91 sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfi 169 (427)
.+++... .|..|+|+..........+|+||++||..+.++..+-.+. ..+. +-++|+.+
T Consensus 34 ~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~~~------------------~~L~~~Gy~V~~~ 93 (330)
T PLN02298 34 KSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQSTA------------------IFLAQMGFACFAL 93 (330)
T ss_pred cceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhHHH------------------HHHHhCCCEEEEe
Confidence 4566553 4678988655432222356899999998433221100110 0122 34899999
Q ss_pred eCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCccee
Q 041833 170 DSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAIN 249 (427)
Q Consensus 170 DqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~in 249 (427)
|+| |+|.|.... .+. .+.+..++|+..+++... ...++...+++|+|+|+||..+..++.. .+-.
T Consensus 94 D~r-GhG~S~~~~--~~~-~~~~~~~~D~~~~i~~l~-~~~~~~~~~i~l~GhSmGG~ia~~~a~~----------~p~~ 158 (330)
T PLN02298 94 DLE-GHGRSEGLR--AYV-PNVDLVVEDCLSFFNSVK-QREEFQGLPRFLYGESMGGAICLLIHLA----------NPEG 158 (330)
T ss_pred cCC-CCCCCCCcc--ccC-CCHHHHHHHHHHHHHHHH-hcccCCCCCEEEEEecchhHHHHHHHhc----------Cccc
Confidence 998 999996422 222 256778899988887543 2223445689999999999766655542 1345
Q ss_pred cceeeeccCccCcccccch------hhhHhhhc----c------cCCH----HHHHHHHHhhhccCCCCC-ch-hHHHHH
Q 041833 250 LKGYMVGNALTDDYHDYLG------LFQFWWSA----G------LISD----DTYKQLNLLCDYESFVHP-SS-SCDKVL 307 (427)
Q Consensus 250 LkGi~ign~~id~~~~~~~------~~~f~~~~----g------lI~~----~~~~~l~~~C~~~~~~~~-~~-~C~~~~ 307 (427)
++++++.+|..+....... ...++... . .++. .....+. ..+...+... .. .....+
T Consensus 159 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 237 (330)
T PLN02298 159 FDGAVLVAPMCKISDKIRPPWPIPQILTFVARFLPTLAIVPTADLLEKSVKVPAKKIIA-KRNPMRYNGKPRLGTVVELL 237 (330)
T ss_pred ceeEEEecccccCCcccCCchHHHHHHHHHHHHCCCCccccCCCcccccccCHHHHHHH-HhCccccCCCccHHHHHHHH
Confidence 8999999987653221100 00010000 0 0000 0000000 0001000000 00 001111
Q ss_pred HHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEE
Q 041833 308 EVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVT 387 (427)
Q Consensus 308 ~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~ 387 (427)
........ ..-++ .++.||++|+.|.++|...++++.+.+..+.+ +++.
T Consensus 238 ~~~~~~~~--~l~~i-------~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~----------------------~l~~ 286 (330)
T PLN02298 238 RVTDYLGK--KLKDV-------SIPFIVLHGSADVVTDPDVSRALYEEAKSEDK----------------------TIKI 286 (330)
T ss_pred HHHHHHHH--hhhhc-------CCCEEEEecCCCCCCCHHHHHHHHHHhccCCc----------------------eEEE
Confidence 11000000 00111 14578999999999999999999888764433 7889
Q ss_pred ECCCCCcCCcCCcHH----HHHHHHHHHcCCCCCCCccccCCC
Q 041833 388 VRGAGHEVPLHRPKP----ALTLIKSFLSGRSMPCLKRVSHSD 426 (427)
Q Consensus 388 V~gAGHmvP~dqPe~----~~~mi~~fL~g~~l~~~~~~~~~~ 426 (427)
++++||++..++|+. +.+.+.+||....-+..++.|.+-
T Consensus 287 ~~~a~H~~~~e~pd~~~~~~~~~i~~fl~~~~~~~~~~~~~~~ 329 (330)
T PLN02298 287 YDGMMHSLLFGEPDENIEIVRRDILSWLNERCTGKATPSEDSI 329 (330)
T ss_pred cCCcEeeeecCCCHHHHHHHHHHHHHHHHHhccCCCCCccccC
Confidence 999999999999964 667778899887767777666553
No 15
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.51 E-value=7.4e-13 Score=126.93 Aligned_cols=233 Identities=17% Similarity=0.143 Sum_probs=131.3
Q ss_pred CCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHH
Q 041833 114 DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKR 193 (427)
Q Consensus 114 ~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~ 193 (427)
.+...|+||++||.+|.+..+ ..+.+ .+ .+.++++.+|.| |.|.|.......+ +.+.
T Consensus 24 g~~~~~~vv~~hG~~~~~~~~-~~~~~-----------~l-------~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~ 80 (278)
T TIGR03056 24 GPTAGPLLLLLHGTGASTHSW-RDLMP-----------PL-------ARSFRVVAPDLP-GHGFTRAPFRFRF---TLPS 80 (278)
T ss_pred CCCCCCeEEEEcCCCCCHHHH-HHHHH-----------HH-------hhCcEEEeecCC-CCCCCCCccccCC---CHHH
Confidence 344568999999998877665 33322 11 124799999997 9999975432222 6778
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccch-hhhH
Q 041833 194 TAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLG-LFQF 272 (427)
Q Consensus 194 ~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~-~~~f 272 (427)
.++++.++++. +..++++|+|+|+||..+..+|... +..++++++.++..++...... ..++
T Consensus 81 ~~~~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~v~~~~~~~~~~~~~~~~~~~ 143 (278)
T TIGR03056 81 MAEDLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDG----------PVTPRMVVGINAALMPFEGMAGTLFPY 143 (278)
T ss_pred HHHHHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhC----------CcccceEEEEcCcccccccccccccch
Confidence 88888887763 3446899999999997777666532 3457888888876554221110 0011
Q ss_pred hh----hcccCCHHHHH-------HHHHhhhccCCCCCchhHHHHHHHHHhh-------cCCccccccc-cccccc--cc
Q 041833 273 WW----SAGLISDDTYK-------QLNLLCDYESFVHPSSSCDKVLEVADNE-------LGNIDQYNRD-LLTFLV--LF 331 (427)
Q Consensus 273 ~~----~~glI~~~~~~-------~l~~~C~~~~~~~~~~~C~~~~~~~~~~-------~g~in~Ydi~-~p~~lp--~i 331 (427)
+. ...+.. .... .+.+....... ................ ...+..+... ....++ .+
T Consensus 144 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 221 (278)
T TIGR03056 144 MARVLACNPFTP-PMMSRGAADQQRVERLIRDTGS-LLDKAGMTYYGRLIRSPAHVDGALSMMAQWDLAPLNRDLPRITI 221 (278)
T ss_pred hhHhhhhcccch-HHHHhhcccCcchhHHhhcccc-ccccchhhHHHHhhcCchhhhHHHHHhhcccccchhhhcccCCC
Confidence 00 000000 0000 00000000000 0000000000000000 0000000000 000122 24
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFL 411 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL 411 (427)
+.|+++|+.|.++|....+.+.+.+. +..++.++++||+++.++|+...+.|.+|+
T Consensus 222 P~lii~g~~D~~vp~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 222 PLHLIAGEEDKAVPPDESKRAATRVP------------------------TATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred CEEEEEeCCCcccCHHHHHHHHHhcc------------------------CCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 57899999999999988888777553 235788999999999999999999999998
Q ss_pred c
Q 041833 412 S 412 (427)
Q Consensus 412 ~ 412 (427)
+
T Consensus 278 ~ 278 (278)
T TIGR03056 278 E 278 (278)
T ss_pred C
Confidence 4
No 16
>PHA02857 monoglyceride lipase; Provisional
Probab=99.50 E-value=2.6e-12 Score=124.30 Aligned_cols=243 Identities=14% Similarity=0.189 Sum_probs=140.5
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccc-cceEEEEeCCCCcccC
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQ-VANILFLDSPVGVGFS 178 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~anvlfiDqP~G~GfS 178 (427)
.|.+|+|.+++.. +..+|+||.+||..+++..+ -.+.+ .+.+ -.+++.+|.| |+|.|
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~~-~~~~~------------------~l~~~g~~via~D~~-G~G~S 66 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGRY-EELAE------------------NISSLGILVFSHDHI-GHGRS 66 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccchH-HHHHH------------------HHHhCCCEEEEccCC-CCCCC
Confidence 4678999877664 34568999999997766664 33322 1222 3789999998 99999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
.... ... .+.....+|+.+++....+. +...+++|+|+|+||..+..+|.+ .+-+++|+++.+|
T Consensus 67 ~~~~-~~~--~~~~~~~~d~~~~l~~~~~~---~~~~~~~lvG~S~GG~ia~~~a~~----------~p~~i~~lil~~p 130 (276)
T PHA02857 67 NGEK-MMI--DDFGVYVRDVVQHVVTIKST---YPGVPVFLLGHSMGATISILAAYK----------NPNLFTAMILMSP 130 (276)
T ss_pred CCcc-CCc--CCHHHHHHHHHHHHHHHHhh---CCCCCEEEEEcCchHHHHHHHHHh----------CccccceEEEecc
Confidence 6432 111 14445567777766544333 445789999999999777666642 1345899999999
Q ss_pred ccCcccccchhhhH--------hhhcccC---CHHHH-HHH--HHhhhccCCC---CCchh-HHHHHHHHHhhcCCcccc
Q 041833 259 LTDDYHDYLGLFQF--------WWSAGLI---SDDTY-KQL--NLLCDYESFV---HPSSS-CDKVLEVADNELGNIDQY 320 (427)
Q Consensus 259 ~id~~~~~~~~~~f--------~~~~glI---~~~~~-~~l--~~~C~~~~~~---~~~~~-C~~~~~~~~~~~g~in~Y 320 (427)
.+..... ...+. ......+ ..... +.. .......... ..... +.............+.
T Consensus 131 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 206 (276)
T PHA02857 131 LVNAEAV--PRLNLLAAKLMGIFYPNKIVGKLCPESVSRDMDEVYKYQYDPLVNHEKIKAGFASQVLKATNKVRKIIP-- 206 (276)
T ss_pred ccccccc--cHHHHHHHHHHHHhCCCCccCCCCHhhccCCHHHHHHHhcCCCccCCCccHHHHHHHHHHHHHHHHhcc--
Confidence 8764221 11111 0001111 11000 000 0001110000 00111 1111111000000000
Q ss_pred cccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCc
Q 041833 321 NRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRP 400 (427)
Q Consensus 321 di~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqP 400 (427)
.+ ..+.||+.|+.|.+||...++++.+.+.- +.++.+++++||+++.|+|
T Consensus 207 ~i-------~~Pvliv~G~~D~i~~~~~~~~l~~~~~~-----------------------~~~~~~~~~~gH~~~~e~~ 256 (276)
T PHA02857 207 KI-------KTPILILQGTNNEISDVSGAYYFMQHANC-----------------------NREIKIYEGAKHHLHKETD 256 (276)
T ss_pred cC-------CCCEEEEecCCCCcCChHHHHHHHHHccC-----------------------CceEEEeCCCcccccCCch
Confidence 11 13578999999999999999999887642 1267999999999999998
Q ss_pred H---HHHHHHHHHHcCC
Q 041833 401 K---PALTLIKSFLSGR 414 (427)
Q Consensus 401 e---~~~~mi~~fL~g~ 414 (427)
+ ++++-+.+||.+.
T Consensus 257 ~~~~~~~~~~~~~l~~~ 273 (276)
T PHA02857 257 EVKKSVMKEIETWIFNR 273 (276)
T ss_pred hHHHHHHHHHHHHHHHh
Confidence 4 5677777898764
No 17
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.49 E-value=1.1e-12 Score=126.91 Aligned_cols=232 Identities=15% Similarity=0.094 Sum_probs=123.2
Q ss_pred CCCceEeecCCCCchhHhhhhhhh-cCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEE-IGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e-~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
+.|.||+|||.++.+..+ ..+.. .-++ ..+.+++|.+|.| |.|.|..... +.. .....+
T Consensus 29 ~~~~ivllHG~~~~~~~~-~~~~~~~~~l---------------~~~~~~vi~~D~~-G~G~S~~~~~-~~~--~~~~~~ 88 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGW-SNYYRNIGPF---------------VDAGYRVILKDSP-GFNKSDAVVM-DEQ--RGLVNA 88 (282)
T ss_pred CCCeEEEECCCCCchhhH-HHHHHHHHHH---------------HhCCCEEEEECCC-CCCCCCCCcC-ccc--ccchhH
Confidence 347799999986544433 21100 0010 1134899999998 9999964321 111 122346
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc--c-cc--chhh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY--H-DY--LGLF 270 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~--~-~~--~~~~ 270 (427)
+++.++++. +..++++++|+|+||.++-.+|.+..+ .++++++.+|..... . .. ....
T Consensus 89 ~~l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~----------~v~~lvl~~~~~~~~~~~~~~~~~~~~ 151 (282)
T TIGR03343 89 RAVKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPD----------RIGKLILMGPGGLGPSLFAPMPMEGIK 151 (282)
T ss_pred HHHHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChH----------hhceEEEECCCCCCccccccCchHHHH
Confidence 666666553 456789999999999888888774332 366777766532110 0 00 0000
Q ss_pred hHhhhcccCCHHHHHHHHHhhhccCCCCCchh-----------HHHHHHHHHhhc--CCccccccccccccc--ccceeE
Q 041833 271 QFWWSAGLISDDTYKQLNLLCDYESFVHPSSS-----------CDKVLEVADNEL--GNIDQYNRDLLTFLV--LFDFLY 335 (427)
Q Consensus 271 ~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~-----------C~~~~~~~~~~~--g~in~Ydi~~p~~lp--~i~~Li 335 (427)
.+...........++.+......... ..+.. +......+.... .....+++.. .++ ..+.|+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvll 228 (282)
T TIGR03343 152 LLFKLYAEPSYETLKQMLNVFLFDQS-LITEELLQGRWENIQRQPEHLKNFLISSQKAPLSTWDVTA--RLGEIKAKTLV 228 (282)
T ss_pred HHHHHhcCCCHHHHHHHHhhCccCcc-cCcHHHHHhHHHHhhcCHHHHHHHHHhccccccccchHHH--HHhhCCCCEEE
Confidence 00000000011111111111000000 00000 000000110000 0111111110 122 134689
Q ss_pred EeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 336 DSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 336 y~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
+.|+.|.++|...++++.+.+. +.+++.|++|||+++.++|+...++|.+||.
T Consensus 229 i~G~~D~~v~~~~~~~~~~~~~------------------------~~~~~~i~~agH~~~~e~p~~~~~~i~~fl~ 281 (282)
T TIGR03343 229 TWGRDDRFVPLDHGLKLLWNMP------------------------DAQLHVFSRCGHWAQWEHADAFNRLVIDFLR 281 (282)
T ss_pred EEccCCCcCCchhHHHHHHhCC------------------------CCEEEEeCCCCcCCcccCHHHHHHHHHHHhh
Confidence 9999999999887887777653 4477899999999999999999999999985
No 18
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.46 E-value=3.3e-12 Score=128.69 Aligned_cols=252 Identities=15% Similarity=0.205 Sum_probs=141.5
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcccC
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVGFS 178 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfS 178 (427)
.|..||+......+ .+.+|+||++||..+.++..+-.+.+ .+. +-++++-+|.| |+|.|
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~~~------------------~l~~~g~~v~~~D~~-G~G~S 129 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGIAR------------------KIASSGYGVFAMDYP-GFGLS 129 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHHHH------------------HHHhCCCEEEEecCC-CCCCC
Confidence 46789886654322 24569999999986654432111111 112 24789999998 99999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
.... .+. .+.+..++|+.++++.. ...+++...+++|+|||+||..+..+|.+- +-.++|+++.+|
T Consensus 130 ~~~~--~~~-~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~----------p~~v~glVLi~p 195 (349)
T PLN02385 130 EGLH--GYI-PSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQ----------PNAWDGAILVAP 195 (349)
T ss_pred CCCC--CCc-CCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhC----------cchhhheeEecc
Confidence 7532 222 26677888888877653 333345566899999999997766665431 345899999988
Q ss_pred ccCcccccc--hhh-hHh---hh----cccCC-----HHHHHHH--HHhhhccCC-CCCchhHHHHHHHHHhhcC-Cccc
Q 041833 259 LTDDYHDYL--GLF-QFW---WS----AGLIS-----DDTYKQL--NLLCDYESF-VHPSSSCDKVLEVADNELG-NIDQ 319 (427)
Q Consensus 259 ~id~~~~~~--~~~-~f~---~~----~glI~-----~~~~~~l--~~~C~~~~~-~~~~~~C~~~~~~~~~~~g-~in~ 319 (427)
......... ... ..+ .. ..++. +..+... ......... .........+.+.+..... .-..
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l 275 (349)
T PLN02385 196 MCKIADDVVPPPLVLQILILLANLLPKAKLVPQKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTTQEIEMQL 275 (349)
T ss_pred cccccccccCchHHHHHHHHHHHHCCCceecCCCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHHHHHHHhc
Confidence 654211100 000 000 00 00000 0000000 000000000 0000001111111110000 0001
Q ss_pred ccccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCC
Q 041833 320 YNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHR 399 (427)
Q Consensus 320 Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dq 399 (427)
..+. ++.||++|+.|.++|...++.+.+.+.-+. .++.+++++||+++.++
T Consensus 276 ~~i~-------~P~Lii~G~~D~vv~~~~~~~l~~~~~~~~----------------------~~l~~i~~~gH~l~~e~ 326 (349)
T PLN02385 276 EEVS-------LPLLILHGEADKVTDPSVSKFLYEKASSSD----------------------KKLKLYEDAYHSILEGE 326 (349)
T ss_pred ccCC-------CCEEEEEeCCCCccChHHHHHHHHHcCCCC----------------------ceEEEeCCCeeecccCC
Confidence 1122 347899999999999998888888774332 36789999999999999
Q ss_pred cHH----HHHHHHHHHcCC
Q 041833 400 PKP----ALTLIKSFLSGR 414 (427)
Q Consensus 400 Pe~----~~~mi~~fL~g~ 414 (427)
|++ +++.|.+||...
T Consensus 327 p~~~~~~v~~~i~~wL~~~ 345 (349)
T PLN02385 327 PDEMIFQVLDDIISWLDSH 345 (349)
T ss_pred ChhhHHHHHHHHHHHHHHh
Confidence 987 788889999754
No 19
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.45 E-value=3e-12 Score=119.09 Aligned_cols=229 Identities=17% Similarity=0.119 Sum_probs=124.5
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
..+|+||.+||-++.+..+ ..+.+. + .+.++++.+|.| |.|.|.... ..+ +.++.+
T Consensus 11 ~~~~~li~~hg~~~~~~~~-~~~~~~-----------l-------~~~~~v~~~d~~-G~G~s~~~~-~~~---~~~~~~ 66 (251)
T TIGR02427 11 DGAPVLVFINSLGTDLRMW-DPVLPA-----------L-------TPDFRVLRYDKR-GHGLSDAPE-GPY---SIEDLA 66 (251)
T ss_pred CCCCeEEEEcCcccchhhH-HHHHHH-----------h-------hcccEEEEecCC-CCCCCCCCC-CCC---CHHHHH
Confidence 3679999999875555543 333321 1 134799999998 999985332 222 567778
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWS 275 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~ 275 (427)
+++.++++. +...+++|+|+|+||..+..+|.+. +..++++++.++........ .+......
T Consensus 67 ~~~~~~i~~-------~~~~~v~liG~S~Gg~~a~~~a~~~----------p~~v~~li~~~~~~~~~~~~-~~~~~~~~ 128 (251)
T TIGR02427 67 DDVLALLDH-------LGIERAVFCGLSLGGLIAQGLAARR----------PDRVRALVLSNTAAKIGTPE-SWNARIAA 128 (251)
T ss_pred HHHHHHHHH-------hCCCceEEEEeCchHHHHHHHHHHC----------HHHhHHHhhccCccccCchh-hHHHHHhh
Confidence 888777763 3445899999999998777777642 22366776666542211100 00000000
Q ss_pred c-ccCCHHHHHHH-HHhhhccCCCCCchhHHHHHHHHHhhc--------CCccccccccccccc--ccceeEEeCCCCcc
Q 041833 276 A-GLISDDTYKQL-NLLCDYESFVHPSSSCDKVLEVADNEL--------GNIDQYNRDLLTFLV--LFDFLYDSGDTDAV 343 (427)
Q Consensus 276 ~-glI~~~~~~~l-~~~C~~~~~~~~~~~C~~~~~~~~~~~--------g~in~Ydi~~p~~lp--~i~~Liy~Gd~D~i 343 (427)
. ........+.+ ....................+.+.... ..+...++.. .+. ..+.|++.|+.|.+
T Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Pvlii~g~~D~~ 206 (251)
T TIGR02427 129 VRAEGLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQPPDGYAGCCAAIRDADFRD--RLGAIAVPTLCIAGDQDGS 206 (251)
T ss_pred hhhccHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcCHHHHHHHHHHHhcccHHH--HhhhcCCCeEEEEeccCCc
Confidence 0 00000000000 000000000000000000000000000 0000111100 111 24578999999999
Q ss_pred cChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 344 IPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 344 ~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
+|....+.+.+.++ +.++++++++||+++.++|+...+.|+.|+.
T Consensus 207 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl~ 251 (251)
T TIGR02427 207 TPPELVREIADLVP------------------------GARFAEIRGAGHIPCVEQPEAFNAALRDFLR 251 (251)
T ss_pred CChHHHHHHHHhCC------------------------CceEEEECCCCCcccccChHHHHHHHHHHhC
Confidence 99987777776553 2367899999999999999999999999974
No 20
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.45 E-value=4.5e-12 Score=123.02 Aligned_cols=232 Identities=16% Similarity=0.123 Sum_probs=133.1
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
+..+.|+..+. + ...|.||++||-++.+..+ ..+.+ . ..+..++|.+|.| |.|.|..
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~~-----------~-------L~~~~~vi~~Dl~-G~G~S~~ 67 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFIE-----------A-------LDPDLEVIAFDVP-GVGGSST 67 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHHH-----------H-------hccCceEEEECCC-CCCCCCC
Confidence 34678876432 2 3446789999976666665 33322 1 1245799999998 9999964
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
. ...+ +.+..++++.++|.. +..++++|+|+|+||..+-.+|.+- +-.++++++.|+..
T Consensus 68 ~-~~~~---~~~~~~~~~~~~i~~-------l~~~~~~LvG~S~GG~va~~~a~~~----------p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 68 P-RHPY---RFPGLAKLAARMLDY-------LDYGQVNAIGVSWGGALAQQFAHDY----------PERCKKLILAATAA 126 (276)
T ss_pred C-CCcC---cHHHHHHHHHHHHHH-------hCcCceEEEEECHHHHHHHHHHHHC----------HHHhhheEEeccCC
Confidence 3 2222 567777887777764 3446899999999997777777642 23488999988775
Q ss_pred Cccc--ccchhhhHhhh-cccC-------------------CHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcc
Q 041833 261 DDYH--DYLGLFQFWWS-AGLI-------------------SDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNID 318 (427)
Q Consensus 261 d~~~--~~~~~~~f~~~-~glI-------------------~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in 318 (427)
.... ........... ...+ +.+..+.....+. ...+......+.... ..+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~-~~~ 198 (276)
T TIGR02240 127 GAVMVPGKPKVLMMMASPRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVR-------SGGKLGYYWQLFAGL-GWT 198 (276)
T ss_pred ccccCCCchhHHHHhcCchhhhccccccchhhhhccceeeccchhhhhhhhhcc-------cCCCchHHHHHHHHc-CCc
Confidence 4210 00000000000 0000 0000000000000 000000000000000 000
Q ss_pred ccccccccccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCC
Q 041833 319 QYNRDLLTFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVP 396 (427)
Q Consensus 319 ~Ydi~~p~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP 396 (427)
..+ .++ .++.||+.|+.|.++|....++..+.+. +.+++++.+ |||++
T Consensus 199 ~~~-----~l~~i~~P~lii~G~~D~~v~~~~~~~l~~~~~------------------------~~~~~~i~~-gH~~~ 248 (276)
T TIGR02240 199 SIH-----WLHKIQQPTLVLAGDDDPIIPLINMRLLAWRIP------------------------NAELHIIDD-GHLFL 248 (276)
T ss_pred hhh-----HhhcCCCCEEEEEeCCCCcCCHHHHHHHHHhCC------------------------CCEEEEEcC-CCchh
Confidence 000 111 2357899999999999998888777654 236677764 99999
Q ss_pred cCCcHHHHHHHHHHHcCC
Q 041833 397 LHRPKPALTLIKSFLSGR 414 (427)
Q Consensus 397 ~dqPe~~~~mi~~fL~g~ 414 (427)
.++|+...++|.+|+.+.
T Consensus 249 ~e~p~~~~~~i~~fl~~~ 266 (276)
T TIGR02240 249 ITRAEAVAPIIMKFLAEE 266 (276)
T ss_pred hccHHHHHHHHHHHHHHh
Confidence 999999999999999864
No 21
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.45 E-value=2.8e-12 Score=125.76 Aligned_cols=248 Identities=13% Similarity=0.064 Sum_probs=129.9
Q ss_pred EeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEe
Q 041833 91 SGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLD 170 (427)
Q Consensus 91 sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiD 170 (427)
+.+++++ +..++|.- .+ +.|.||.|||.|..+..+ -.+.+ .+.+.++++.+|
T Consensus 16 ~~~~~~~---~~~i~y~~---~G---~~~~iv~lHG~~~~~~~~-~~~~~------------------~l~~~~~vi~~D 67 (286)
T PRK03204 16 SRWFDSS---RGRIHYID---EG---TGPPILLCHGNPTWSFLY-RDIIV------------------ALRDRFRCVAPD 67 (286)
T ss_pred ceEEEcC---CcEEEEEE---CC---CCCEEEEECCCCccHHHH-HHHHH------------------HHhCCcEEEEEC
Confidence 3467774 34566541 11 357899999998655444 22221 122458999999
Q ss_pred CCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceec
Q 041833 171 SPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINL 250 (427)
Q Consensus 171 qP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inL 250 (427)
.| |.|.|......++ +.+..++++.++++. +...+++|+||||||..+-.+|..- +..+
T Consensus 68 ~~-G~G~S~~~~~~~~---~~~~~~~~~~~~~~~-------~~~~~~~lvG~S~Gg~va~~~a~~~----------p~~v 126 (286)
T PRK03204 68 YL-GFGLSERPSGFGY---QIDEHARVIGEFVDH-------LGLDRYLSMGQDWGGPISMAVAVER----------ADRV 126 (286)
T ss_pred CC-CCCCCCCCCcccc---CHHHHHHHHHHHHHH-------hCCCCEEEEEECccHHHHHHHHHhC----------hhhe
Confidence 98 9999964322122 456667666666553 3456899999999997665555421 3458
Q ss_pred ceeeeccCccCccccc-chhhhHhhhcccCCHHHH--HHHHHhhhc-c--CC-----------CCCchhHHHHHHHHHhh
Q 041833 251 KGYMVGNALTDDYHDY-LGLFQFWWSAGLISDDTY--KQLNLLCDY-E--SF-----------VHPSSSCDKVLEVADNE 313 (427)
Q Consensus 251 kGi~ign~~id~~~~~-~~~~~f~~~~glI~~~~~--~~l~~~C~~-~--~~-----------~~~~~~C~~~~~~~~~~ 313 (427)
+++++.++...+.... .......+.......... +.+.+.+.. . .. .............+...
T Consensus 127 ~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (286)
T PRK03204 127 RGVVLGNTWFWPADTLAMKAFSRVMSSPPVQYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQ 206 (286)
T ss_pred eEEEEECccccCCCchhHHHHHHHhccccchhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHh
Confidence 8888887754221110 000000000000000000 000010000 0 00 00011111111100000
Q ss_pred cCCccc--ccccc--cccccccceeEEeCCCCcccChhh-HHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEE
Q 041833 314 LGNIDQ--YNRDL--LTFLVLFDFLYDSGDTDAVIPVTS-TRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTV 388 (427)
Q Consensus 314 ~g~in~--Ydi~~--p~~lp~i~~Liy~Gd~D~i~p~~g-t~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V 388 (427)
...... -++.. ....-..+.||+.|+.|.+++... .+++.+.+. +.++.+|
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~PtliI~G~~D~~~~~~~~~~~~~~~ip------------------------~~~~~~i 262 (286)
T PRK03204 207 ILAARPLLARLAREVPATLGTKPTLLVWGMKDVAFRPKTILPRLRATFP------------------------DHVLVEL 262 (286)
T ss_pred cchhhHHHHHhhhhhhhhcCCCCeEEEecCCCcccCcHHHHHHHHHhcC------------------------CCeEEEc
Confidence 000000 00000 000003568899999999886554 344545443 4578999
Q ss_pred CCCCCcCCcCCcHHHHHHHHHHH
Q 041833 389 RGAGHEVPLHRPKPALTLIKSFL 411 (427)
Q Consensus 389 ~gAGHmvP~dqPe~~~~mi~~fL 411 (427)
++|||+++.++|+.+.++|.+|+
T Consensus 263 ~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 263 PNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCCcccccccCHHHHHHHHHHhc
Confidence 99999999999999999999997
No 22
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.42 E-value=8.9e-12 Score=126.36 Aligned_cols=236 Identities=17% Similarity=0.119 Sum_probs=129.0
Q ss_pred CCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHH
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAE 196 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~ 196 (427)
+.|.||.|||.++.+..+ ..+.+ ...+.+++|.+|.| |.|.|.......+ +.+..++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~ 143 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRNIG------------------VLAKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAE 143 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHHHH------------------HHhcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHH
Confidence 457889999998887776 33322 01245799999998 9999964322222 5677888
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccc-----cc----
Q 041833 197 DSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHD-----YL---- 267 (427)
Q Consensus 197 d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~-----~~---- 267 (427)
++.++|.. +...+++|+|+|+||..+..+|.. . .+-.++++++.|+....... ..
T Consensus 144 ~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~---~------~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~ 207 (360)
T PLN02679 144 LILDFLEE-------VVQKPTVLIGNSVGSLACVIAASE---S------TRDLVRGLVLLNCAGGMNNKAVVDDWRIKLL 207 (360)
T ss_pred HHHHHHHH-------hcCCCeEEEEECHHHHHHHHHHHh---c------ChhhcCEEEEECCccccccccccchHHHhhh
Confidence 88887763 345689999999999665554432 1 13348899988875321100 00
Q ss_pred ----hhhhHhhhcccCC---------HHHHHHHHHhhhccCCCCCchhHHHH----------HHHHHhhcCCcccccccc
Q 041833 268 ----GLFQFWWSAGLIS---------DDTYKQLNLLCDYESFVHPSSSCDKV----------LEVADNELGNIDQYNRDL 324 (427)
Q Consensus 268 ----~~~~f~~~~glI~---------~~~~~~l~~~C~~~~~~~~~~~C~~~----------~~~~~~~~g~in~Ydi~~ 324 (427)
.+..++.....+. ....+.+....-.... ......... .+.+.........++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 285 (360)
T PLN02679 208 LPLLWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKE-AVDDELVEIIRGPADDEGALDAFVSIVTGPPGPNPI- 285 (360)
T ss_pred cchHHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcc-cCCHHHHHHHHhhccCCChHHHHHHHHhcCCCCCHH-
Confidence 0011111111111 1111111111000000 000000000 01111000000011110
Q ss_pred ccccc--ccceeEEeCCCCcccChhhH-HHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcH
Q 041833 325 LTFLV--LFDFLYDSGDTDAVIPVTST-RYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPK 401 (427)
Q Consensus 325 p~~lp--~i~~Liy~Gd~D~i~p~~gt-~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe 401 (427)
+ .++ .++.||+.|+.|.++|.... .++++.|. +..++.++++|++|||+++.++|+
T Consensus 286 ~-~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~--------------------~~ip~~~l~~i~~aGH~~~~E~Pe 344 (360)
T PLN02679 286 K-LIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLP--------------------SQLPNVTLYVLEGVGHCPHDDRPD 344 (360)
T ss_pred H-HhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhh--------------------ccCCceEEEEcCCCCCCccccCHH
Confidence 0 122 24578999999999998753 23334331 122356789999999999999999
Q ss_pred HHHHHHHHHHcCC
Q 041833 402 PALTLIKSFLSGR 414 (427)
Q Consensus 402 ~~~~mi~~fL~g~ 414 (427)
++.+.|.+||...
T Consensus 345 ~~~~~I~~FL~~~ 357 (360)
T PLN02679 345 LVHEKLLPWLAQL 357 (360)
T ss_pred HHHHHHHHHHHhc
Confidence 9999999999754
No 23
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.41 E-value=8.7e-12 Score=122.10 Aligned_cols=251 Identities=14% Similarity=0.086 Sum_probs=139.0
Q ss_pred eEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCC
Q 041833 93 YVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSP 172 (427)
Q Consensus 93 y~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP 172 (427)
+++++ +.+++|.-. . +.|.||++||.|+.+..+ -.+.+ .+.+...++-+|.|
T Consensus 11 ~~~~~---g~~i~y~~~----G--~g~~vvllHG~~~~~~~w-~~~~~------------------~L~~~~~via~D~~ 62 (295)
T PRK03592 11 RVEVL---GSRMAYIET----G--EGDPIVFLHGNPTSSYLW-RNIIP------------------HLAGLGRCLAPDLI 62 (295)
T ss_pred EEEEC---CEEEEEEEe----C--CCCEEEEECCCCCCHHHH-HHHHH------------------HHhhCCEEEEEcCC
Confidence 45553 356776522 1 347899999999888776 33322 11234589999998
Q ss_pred CCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecce
Q 041833 173 VGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKG 252 (427)
Q Consensus 173 ~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkG 252 (427)
|.|+|.... .++ +.+..|+|+..+++. +..++++|+|+|+||.++..+|.+. +-.+++
T Consensus 63 -G~G~S~~~~-~~~---~~~~~a~dl~~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~ 120 (295)
T PRK03592 63 -GMGASDKPD-IDY---TFADHARYLDAWFDA-------LGLDDVVLVGHDWGSALGFDWAARH----------PDRVRG 120 (295)
T ss_pred -CCCCCCCCC-CCC---CHHHHHHHHHHHHHH-------hCCCCeEEEEECHHHHHHHHHHHhC----------hhheeE
Confidence 999997532 223 677888888887764 4557899999999998887777643 334889
Q ss_pred eeeccCccCccc-c-cc----hhhhHhhhcccCCHHHH----HHHHHhhhccCCCCCchh-HH------------H-HHH
Q 041833 253 YMVGNALTDDYH-D-YL----GLFQFWWSAGLISDDTY----KQLNLLCDYESFVHPSSS-CD------------K-VLE 308 (427)
Q Consensus 253 i~ign~~id~~~-~-~~----~~~~f~~~~glI~~~~~----~~l~~~C~~~~~~~~~~~-C~------------~-~~~ 308 (427)
+++.++.+.+.. . .. .....+.. ..+..... ..+..............+ .. + ..+
T Consensus 121 lil~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (295)
T PRK03592 121 IAFMEAIVRPMTWDDFPPAVRELFQALRS-PGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLS 199 (295)
T ss_pred EEEECCCCCCcchhhcchhHHHHHHHHhC-cccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhh
Confidence 999887543311 0 00 01111110 00000000 000000000000000000 00 0 000
Q ss_pred HHHhhcCCccccccc-----cccccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeec
Q 041833 309 VADNELGNIDQYNRD-----LLTFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYS 381 (427)
Q Consensus 309 ~~~~~~g~in~Ydi~-----~p~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~ 381 (427)
............... ....++ .++.||++|+.|.+++.....+++..+. +
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~~~~~~~~~~-----------------------~ 256 (295)
T PRK03592 200 WPRELPIDGEPADVVALVEEYAQWLATSDVPKLLINAEPGAILTTGAIRDWCRSWP-----------------------N 256 (295)
T ss_pred hhhhcCCCCcchhhHhhhhHhHHHhccCCCCeEEEeccCCcccCcHHHHHHHHHhh-----------------------h
Confidence 000000000000000 000122 2357899999999996666656654321 1
Q ss_pred CeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCCCCC
Q 041833 382 GLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGRSMP 417 (427)
Q Consensus 382 ~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~~l~ 417 (427)
+.++.++.+|||+++.++|+.+.+.|.+|+.+..+.
T Consensus 257 ~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl~~~~~~ 292 (295)
T PRK03592 257 QLEITVFGAGLHFAQEDSPEEIGAAIAAWLRRLRLA 292 (295)
T ss_pred hcceeeccCcchhhhhcCHHHHHHHHHHHHHHhccc
Confidence 236788999999999999999999999999866543
No 24
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.38 E-value=7.3e-12 Score=119.85 Aligned_cols=221 Identities=14% Similarity=0.066 Sum_probs=122.3
Q ss_pred CceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHH
Q 041833 119 PLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDS 198 (427)
Q Consensus 119 Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~ 198 (427)
|.||.|||.++++..+ -.+.+ .+.+.++++.+|.| |.|.|.... .+ +.++.++++
T Consensus 14 ~~ivllHG~~~~~~~w-~~~~~------------------~L~~~~~vi~~Dl~-G~G~S~~~~--~~---~~~~~~~~l 68 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCIDE------------------ELSSHFTLHLVDLP-GFGRSRGFG--AL---SLADMAEAV 68 (256)
T ss_pred CeEEEECCCCCChhHH-HHHHH------------------HHhcCCEEEEecCC-CCCCCCCCC--CC---CHHHHHHHH
Confidence 5699999988888776 33222 12356899999998 999996432 22 455555554
Q ss_pred HHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc--ccccchhhhHhhh-
Q 041833 199 LKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD--YHDYLGLFQFWWS- 275 (427)
Q Consensus 199 ~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~--~~~~~~~~~f~~~- 275 (427)
.+ +...+++|+|||+||..+..+|.+- +..++++++.|+.... .............
T Consensus 69 ~~-----------~~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~ 127 (256)
T PRK10349 69 LQ-----------QAPDKAIWLGWSLGGLVASQIALTH----------PERVQALVTVASSPCFSARDEWPGIKPDVLAG 127 (256)
T ss_pred Hh-----------cCCCCeEEEEECHHHHHHHHHHHhC----------hHhhheEEEecCccceecCCCCCcccHHHHHH
Confidence 42 2346899999999998777776532 4457888887763211 1010000000000
Q ss_pred -cccCC---HHHHHHHHHhhhccCCCCCchhHHHHHHHHHh-----------hcCCccccccccccccc--ccceeEEeC
Q 041833 276 -AGLIS---DDTYKQLNLLCDYESFVHPSSSCDKVLEVADN-----------ELGNIDQYNRDLLTFLV--LFDFLYDSG 338 (427)
Q Consensus 276 -~glI~---~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~-----------~~g~in~Ydi~~p~~lp--~i~~Liy~G 338 (427)
...+. ....+.+...+..... ............+.. .......+++.. .++ ..+.||+.|
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~P~lii~G 204 (256)
T PRK10349 128 FQQQLSDDFQRTVERFLALQTMGTE-TARQDARALKKTVLALPMPEVDVLNGGLEILKTVDLRQ--PLQNVSMPFLRLYG 204 (256)
T ss_pred HHHHHHhchHHHHHHHHHHHHccCc-hHHHHHHHHHHHhhccCCCcHHHHHHHHHHHHhCccHH--HHhhcCCCeEEEec
Confidence 00000 0111111111111100 000000000000000 000001112211 122 245789999
Q ss_pred CCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 339 DTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 339 d~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
+.|.++|....+...+.+. +.++++|+++||+++.++|+...+.+.+|-+
T Consensus 205 ~~D~~~~~~~~~~~~~~i~------------------------~~~~~~i~~~gH~~~~e~p~~f~~~l~~~~~ 254 (256)
T PRK10349 205 YLDGLVPRKVVPMLDKLWP------------------------HSESYIFAKAAHAPFISHPAEFCHLLVALKQ 254 (256)
T ss_pred CCCccCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHHHHhc
Confidence 9999999887766656542 4478999999999999999999999999854
No 25
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.38 E-value=8.9e-12 Score=115.64 Aligned_cols=57 Identities=19% Similarity=0.194 Sum_probs=48.7
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSF 410 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~f 410 (427)
.+.|+++|+.|.++|....+.+.+.+. +.++..++++||+++.++|+...+.|.+|
T Consensus 189 ~Pvlii~g~~D~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~gH~~~~e~p~~~~~~i~~f 244 (245)
T TIGR01738 189 VPFLRLYGYLDGLVPAKVVPYLDKLAP------------------------HSELYIFAKAAHAPFLSHAEAFCALLVAF 244 (245)
T ss_pred CCEEEEeecCCcccCHHHHHHHHHhCC------------------------CCeEEEeCCCCCCccccCHHHHHHHHHhh
Confidence 357899999999999888777766553 33678999999999999999999999998
Q ss_pred H
Q 041833 411 L 411 (427)
Q Consensus 411 L 411 (427)
|
T Consensus 245 i 245 (245)
T TIGR01738 245 K 245 (245)
T ss_pred C
Confidence 6
No 26
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.37 E-value=2.5e-11 Score=124.11 Aligned_cols=255 Identities=13% Similarity=0.087 Sum_probs=140.7
Q ss_pred ceEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceE
Q 041833 87 FAHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANI 166 (427)
Q Consensus 87 ~~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anv 166 (427)
++.-+|+.-. .++-.+||. + ..+...|.||.|||.|+.+..+ -.+.+ . ..+.+++
T Consensus 102 ~~~~~~~~~~--~~~~~~~y~--~--~G~~~~~~ivllHG~~~~~~~w-~~~~~-----------~-------L~~~~~V 156 (383)
T PLN03084 102 LKMGAQSQAS--SDLFRWFCV--E--SGSNNNPPVLLIHGFPSQAYSY-RKVLP-----------V-------LSKNYHA 156 (383)
T ss_pred ccccceeEEc--CCceEEEEE--e--cCCCCCCeEEEECCCCCCHHHH-HHHHH-----------H-------HhcCCEE
Confidence 3444455432 234556654 2 2344568999999999877765 33322 1 1235799
Q ss_pred EEEeCCCCcccCcCCCCC-CCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCC
Q 041833 167 LFLDSPVGVGFSYSNTSS-DITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGE 245 (427)
Q Consensus 167 lfiDqP~G~GfSy~~~~~-~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~ 245 (427)
+.+|.| |+|+|...... ... .+.++.++++.++++. +...+++|+|+|+||..+..+|.+.
T Consensus 157 ia~Dlp-G~G~S~~p~~~~~~~-ys~~~~a~~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~--------- 218 (383)
T PLN03084 157 IAFDWL-GFGFSDKPQPGYGFN-YTLDEYVSSLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAH--------- 218 (383)
T ss_pred EEECCC-CCCCCCCCccccccc-CCHHHHHHHHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhC---------
Confidence 999998 99999754321 011 2667788888887764 4456899999999997666666532
Q ss_pred cceecceeeeccCccCcccc-cchh-h---hHhhhcccCC--HHHHHHHHHhhhcc------------CCCCCchh---H
Q 041833 246 KAINLKGYMVGNALTDDYHD-YLGL-F---QFWWSAGLIS--DDTYKQLNLLCDYE------------SFVHPSSS---C 303 (427)
Q Consensus 246 ~~inLkGi~ign~~id~~~~-~~~~-~---~f~~~~glI~--~~~~~~l~~~C~~~------------~~~~~~~~---C 303 (427)
+-.++++++.|+....... .... . .++....... ..........+... ........ .
T Consensus 219 -P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l 297 (383)
T PLN03084 219 -PDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLGEIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFAL 297 (383)
T ss_pred -hHhhcEEEEECCCCccccccchHHHHHHHHHHhhhhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHH
Confidence 3458999999987542110 0100 0 0000000000 00000000001000 00000000 0
Q ss_pred HHHHHHHHhhcCCcccccccccccc----cccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeee
Q 041833 304 DKVLEVADNELGNIDQYNRDLLTFL----VLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQE 379 (427)
Q Consensus 304 ~~~~~~~~~~~g~in~Ydi~~p~~l----p~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~ 379 (427)
......+.. ....+--.....+ -.++.||+.|+.|.+++....+.+.+.+
T Consensus 298 ~~~~r~~~~---~l~~~~~~l~~~l~~~~i~vPvLiI~G~~D~~v~~~~~~~~a~~~----------------------- 351 (383)
T PLN03084 298 NAISRSMKK---ELKKYIEEMRSILTDKNWKTPITVCWGLRDRWLNYDGVEDFCKSS----------------------- 351 (383)
T ss_pred HHHHHHhhc---ccchhhHHHHhhhccccCCCCEEEEeeCCCCCcCHHHHHHHHHhc-----------------------
Confidence 001111110 0000000000000 0245789999999999998877776643
Q ss_pred ecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 380 YSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 380 y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
+.++++|++|||+++.|+|+++.++|.+||..
T Consensus 352 --~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl~~ 383 (383)
T PLN03084 352 --QHKLIELPMAGHHVQEDCGEELGGIISGILSK 383 (383)
T ss_pred --CCeEEEECCCCCCcchhCHHHHHHHHHHHhhC
Confidence 22678999999999999999999999999863
No 27
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.34 E-value=4.9e-12 Score=115.42 Aligned_cols=217 Identities=20% Similarity=0.174 Sum_probs=121.8
Q ss_pred eEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHH
Q 041833 121 VLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLK 200 (427)
Q Consensus 121 ~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~ 200 (427)
||++||.++.+..+ ..+.+ .+ .+..+++.+|.| |.|.|..... +...+.++.++++.+
T Consensus 1 vv~~hG~~~~~~~~-~~~~~-----------~l-------~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~ 58 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLAE-----------AL-------ARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAE 58 (228)
T ss_dssp EEEE-STTTTGGGG-HHHHH-----------HH-------HTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHHH-----------HH-------hCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhh
Confidence 68999999888775 44433 11 146789999998 9999976542 111266777888777
Q ss_pred HHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccccc--c---hhhhHhhh
Q 041833 201 FLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDY--L---GLFQFWWS 275 (427)
Q Consensus 201 fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~--~---~~~~f~~~ 275 (427)
+|+. +..++++|+|+|+||.++..+|.+. +-.++++++.+|........ . .+...+..
T Consensus 59 ~l~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (228)
T PF12697_consen 59 LLDA-------LGIKKVILVGHSMGGMIALRLAARY----------PDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLA 121 (228)
T ss_dssp HHHH-------TTTSSEEEEEETHHHHHHHHHHHHS----------GGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHH
T ss_pred cccc-------ccccccccccccccccccccccccc----------ccccccceeecccccccccccccccchhhhhhhh
Confidence 7763 3447999999999998777777542 33699999999988643221 1 11111111
Q ss_pred cccCCHHHH--HHHHHhhhccCCCC-CchhHHHHHHHHHhhcCCccccccccccccc--ccceeEEeCCCCcccChhhHH
Q 041833 276 AGLISDDTY--KQLNLLCDYESFVH-PSSSCDKVLEVADNELGNIDQYNRDLLTFLV--LFDFLYDSGDTDAVIPVTSTR 350 (427)
Q Consensus 276 ~glI~~~~~--~~l~~~C~~~~~~~-~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp--~i~~Liy~Gd~D~i~p~~gt~ 350 (427)
...-..... ..+...+....... ....-....+.+... ....++.. .++ ..+.+++.|+.|.+++....+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~~~~~pvl~i~g~~D~~~~~~~~~ 196 (228)
T PF12697_consen 122 WRSRSLRRLASRFFYRWFDGDEPEDLIRSSRRALAEYLRSN---LWQADLSE--ALPRIKVPVLVIHGEDDPIVPPESAE 196 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHH--HHHGSSSEEEEEEETTSSSSHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccc---cccccccc--cccccCCCeEEeecCCCCCCCHHHHH
Confidence 000000000 00000000000000 000000000100000 00000000 111 245789999999999976676
Q ss_pred HHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHH
Q 041833 351 YSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALT 405 (427)
Q Consensus 351 ~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~ 405 (427)
++.+.+. +.++++++++||+++.++|++..+
T Consensus 197 ~~~~~~~------------------------~~~~~~~~~~gH~~~~~~p~~~~~ 227 (228)
T PF12697_consen 197 ELADKLP------------------------NAELVVIPGAGHFLFLEQPDEVAE 227 (228)
T ss_dssp HHHHHST------------------------TEEEEEETTSSSTHHHHSHHHHHH
T ss_pred HHHHHCC------------------------CCEEEEECCCCCccHHHCHHHHhc
Confidence 7666553 347899999999999999998764
No 28
>PLN02578 hydrolase
Probab=99.33 E-value=3.8e-11 Score=121.39 Aligned_cols=112 Identities=14% Similarity=0.121 Sum_probs=74.8
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
+.++.|.-.. +.|.||.+||-++.+..+ .... | . +.+.++++.+|.| |.|.|..
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w-~~~~---~--------~-------l~~~~~v~~~D~~-G~G~S~~ 128 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHW-RYNI---P--------E-------LAKKYKVYALDLL-GFGWSDK 128 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHH-HHHH---H--------H-------HhcCCEEEEECCC-CCCCCCC
Confidence 4567765221 235578999876655444 2221 1 1 1245899999998 9999864
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
.. ..| +.+..++++.+|+++. ...+++|+|||+||..+..+|.+. +..++++++.|+.
T Consensus 129 ~~-~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~----------p~~v~~lvLv~~~ 186 (354)
T PLN02578 129 AL-IEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGY----------PELVAGVALLNSA 186 (354)
T ss_pred cc-ccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhC----------hHhcceEEEECCC
Confidence 32 223 5667788888877743 356899999999998777777643 3348888887764
No 29
>PLN02965 Probable pheophorbidase
Probab=99.32 E-value=1.9e-11 Score=117.40 Aligned_cols=225 Identities=11% Similarity=0.066 Sum_probs=123.9
Q ss_pred eEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHH
Q 041833 121 VLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLK 200 (427)
Q Consensus 121 ~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~ 200 (427)
||.+||.++.+..+ -...+ .|. .+.+.+|-+|.| |+|.|.......+ +.++.|+|+.+
T Consensus 6 vvllHG~~~~~~~w-~~~~~-----------~L~------~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~dl~~ 63 (255)
T PLN02965 6 FVFVHGASHGAWCW-YKLAT-----------LLD------AAGFKSTCVDLT-GAGISLTDSNTVS---SSDQYNRPLFA 63 (255)
T ss_pred EEEECCCCCCcCcH-HHHHH-----------HHh------hCCceEEEecCC-cCCCCCCCccccC---CHHHHHHHHHH
Confidence 88899987666554 22211 011 234789999998 9999964322222 67778888888
Q ss_pred HHHHHHHHccCCCC-CCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC-cccc-cchhhh------
Q 041833 201 FLLKWLERFSQFKG-RDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD-DYHD-YLGLFQ------ 271 (427)
Q Consensus 201 fL~~f~~~fp~~~~-~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id-~~~~-~~~~~~------ 271 (427)
+|.. +.. ++++|+||||||..+..+|.+. +-.++++++.++... +... ......
T Consensus 64 ~l~~-------l~~~~~~~lvGhSmGG~ia~~~a~~~----------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 126 (255)
T PLN02965 64 LLSD-------LPPDHKVILVGHSIGGGSVTEALCKF----------TDKISMAIYVAAAMVKPGSIISPRLKNVMEGTE 126 (255)
T ss_pred HHHh-------cCCCCCEEEEecCcchHHHHHHHHhC----------chheeEEEEEccccCCCCCCccHHHHhhhhccc
Confidence 7763 433 5999999999998888777643 234678887776421 1000 000000
Q ss_pred Hhhh----ccc-CCHH--HH--HHHHHhhhccCCCCCchhHHHHHHHHHhh-cCCc-ccccccccccc--cccceeEEeC
Q 041833 272 FWWS----AGL-ISDD--TY--KQLNLLCDYESFVHPSSSCDKVLEVADNE-LGNI-DQYNRDLLTFL--VLFDFLYDSG 338 (427)
Q Consensus 272 f~~~----~gl-I~~~--~~--~~l~~~C~~~~~~~~~~~C~~~~~~~~~~-~g~i-n~Ydi~~p~~l--p~i~~Liy~G 338 (427)
..+. .+. .... .. +.+...+ +.. ............+... .... ..-++. . .+ -.++.|++.|
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~i~vP~lvi~g 201 (255)
T PLN02965 127 KIWDYTFGEGPDKPPTGIMMKPEFVRHYY-YNQ--SPLEDYTLSSKLLRPAPVRAFQDLDKLP-P-NPEAEKVPRVYIKT 201 (255)
T ss_pred cceeeeeccCCCCCcchhhcCHHHHHHHH-hcC--CCHHHHHHHHHhcCCCCCcchhhhhhcc-c-hhhcCCCCEEEEEc
Confidence 0000 000 0000 00 0000000 000 0000000000000000 0000 000000 0 01 1245789999
Q ss_pred CCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 339 DTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 339 d~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
..|.++|....+++.+.+. +.+++++.+|||+++.++|++..++|.+|++.
T Consensus 202 ~~D~~~~~~~~~~~~~~~~------------------------~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~~~ 252 (255)
T PLN02965 202 AKDNLFDPVRQDVMVENWP------------------------PAQTYVLEDSDHSAFFSVPTTLFQYLLQAVSS 252 (255)
T ss_pred CCCCCCCHHHHHHHHHhCC------------------------cceEEEecCCCCchhhcCHHHHHHHHHHHHHH
Confidence 9999999988888777553 33678899999999999999999999999753
No 30
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.30 E-value=6.1e-11 Score=111.99 Aligned_cols=101 Identities=21% Similarity=0.220 Sum_probs=71.1
Q ss_pred CCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHH
Q 041833 118 KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAED 197 (427)
Q Consensus 118 ~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d 197 (427)
.|.||++||.+|++..+ -.+.+ .. +.++++.+|.| |.|.|..... .+.+..+++
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~~~----------------~l---~~~~vi~~D~~-G~G~S~~~~~-----~~~~~~~~~ 55 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPVGE----------------AL---PDYPRLYIDLP-GHGGSAAISV-----DGFADVSRL 55 (242)
T ss_pred CCEEEEECCCCCChHHH-HHHHH----------------Hc---CCCCEEEecCC-CCCCCCCccc-----cCHHHHHHH
Confidence 58899999999988776 33322 11 24899999998 9999964321 156677777
Q ss_pred HHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 198 SLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 198 ~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
+.++|.. +...+++++|+|+||..+..+|.+.. .-.++++++.++..
T Consensus 56 l~~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~---------~~~v~~lvl~~~~~ 102 (242)
T PRK11126 56 LSQTLQS-------YNILPYWLVGYSLGGRIAMYYACQGL---------AGGLCGLIVEGGNP 102 (242)
T ss_pred HHHHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCC---------cccccEEEEeCCCC
Confidence 7777763 45679999999999977777776421 11277888876553
No 31
>PRK06489 hypothetical protein; Provisional
Probab=99.30 E-value=1.4e-10 Score=117.41 Aligned_cols=143 Identities=17% Similarity=0.113 Sum_probs=79.2
Q ss_pred CceEEEeeEEecCCCCeeEEEEEEeec---cCCCCCCceEeecCCCCchhHhhh-hhhhcCCeEEcCCCCceeeCCCCcc
Q 041833 86 NFAHYSGYVTVNEESGRALFYWFVEAV---EDPDSKPLVLWLNGGPGCSSIAYG-EAEEIGPFHIKPDGKTLYLNPYSWN 161 (427)
Q Consensus 86 ~~~~~sGy~~v~~~~~~~lFy~f~es~---~~p~~~Pl~lWlnGGPG~Ss~~~g-~~~e~GP~~~~~~~~~l~~n~~sW~ 161 (427)
+|...+|. .+ .+.+++|.-+-.. .++.+.|.||.|||++|.+..+.. .+.+ ..+. ....--.
T Consensus 38 ~~~~~~~~-~~---~g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~~---~l~~-------~~~~l~~ 103 (360)
T PRK06489 38 DFTFHSGE-TL---PELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFAG---ELFG-------PGQPLDA 103 (360)
T ss_pred ceeccCCC-Cc---CCceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhHH---HhcC-------CCCcccc
Confidence 34555664 22 2456777533210 012236889999999887655410 0000 0000 0000113
Q ss_pred ccceEEEEeCCCCcccCcCCCCC---CCccCChHHHHHHHHHHHHHHHHHccCCCCCCe-EEecCCcCccchHHHHHHHH
Q 041833 162 QVANILFLDSPVGVGFSYSNTSS---DITTNGDKRTAEDSLKFLLKWLERFSQFKGRDF-YISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~---~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~-yI~GESYGG~yvP~lA~~i~ 237 (427)
+.+++|.+|.| |+|.|...... .....+.++.++++.+++.+ ++.-.++ +|+|+|+||..+..+|.+.
T Consensus 104 ~~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~------~lgi~~~~~lvG~SmGG~vAl~~A~~~- 175 (360)
T PRK06489 104 SKYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTE------GLGVKHLRLILGTSMGGMHAWMWGEKY- 175 (360)
T ss_pred cCCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHH------hcCCCceeEEEEECHHHHHHHHHHHhC-
Confidence 56899999998 99999643211 00001456666666665432 2344466 4899999998777777643
Q ss_pred HhhhhcCCcceecceeeeccCc
Q 041833 238 RHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 238 ~~~~~~~~~~inLkGi~ign~~ 259 (427)
+-.++++++.++.
T Consensus 176 ---------P~~V~~LVLi~s~ 188 (360)
T PRK06489 176 ---------PDFMDALMPMASQ 188 (360)
T ss_pred ---------chhhheeeeeccC
Confidence 3347777777664
No 32
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.30 E-value=6.9e-11 Score=118.90 Aligned_cols=60 Identities=13% Similarity=0.181 Sum_probs=50.4
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECC-CCCcCCcCCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRG-AGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~g-AGHmvP~dqPe~~~~mi~~ 409 (427)
.+.||+.|+.|.++|....+++.+.+.- +.++++|.+ +||+++.++|++...+|.+
T Consensus 278 ~PtLvi~G~~D~~~p~~~~~~~~~~i~p-----------------------~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~ 334 (343)
T PRK08775 278 VPTVVVAVEGDRLVPLADLVELAEGLGP-----------------------RGSLRVLRSPYGHDAFLKETDRIDAILTT 334 (343)
T ss_pred CCeEEEEeCCCEeeCHHHHHHHHHHcCC-----------------------CCeEEEEeCCccHHHHhcCHHHHHHHHHH
Confidence 3578999999999999888888776631 236788985 9999999999999999999
Q ss_pred HHcC
Q 041833 410 FLSG 413 (427)
Q Consensus 410 fL~g 413 (427)
||..
T Consensus 335 FL~~ 338 (343)
T PRK08775 335 ALRS 338 (343)
T ss_pred HHHh
Confidence 9964
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.29 E-value=1.1e-10 Score=107.99 Aligned_cols=104 Identities=22% Similarity=0.272 Sum_probs=68.1
Q ss_pred CCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHH
Q 041833 118 KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAED 197 (427)
Q Consensus 118 ~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d 197 (427)
+|+||++||.+|.+..+ -.+.+ .| + +.++++.+|.| |.|.|........ .+.++.+++
T Consensus 1 ~~~vv~~hG~~~~~~~~-~~~~~-----------~L-----~--~~~~v~~~d~~-g~G~s~~~~~~~~--~~~~~~~~~ 58 (251)
T TIGR03695 1 KPVLVFLHGFLGSGADW-QALIE-----------LL-----G--PHFRCLAIDLP-GHGSSQSPDEIER--YDFEEAAQD 58 (251)
T ss_pred CCEEEEEcCCCCchhhH-HHHHH-----------Hh-----c--ccCeEEEEcCC-CCCCCCCCCccCh--hhHHHHHHH
Confidence 47899999998877765 32221 11 1 34799999987 9999964321111 145555656
Q ss_pred -HHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 198 -SLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 198 -~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
+..+++ . +..++++|+|||+||..+..+|.+. +..++++++.++..
T Consensus 59 ~~~~~~~----~---~~~~~~~l~G~S~Gg~ia~~~a~~~----------~~~v~~lil~~~~~ 105 (251)
T TIGR03695 59 ILATLLD----Q---LGIEPFFLVGYSMGGRIALYYALQY----------PERVQGLILESGSP 105 (251)
T ss_pred HHHHHHH----H---cCCCeEEEEEeccHHHHHHHHHHhC----------chheeeeEEecCCC
Confidence 333333 2 3456899999999998877777643 23478888877654
No 34
>PRK10749 lysophospholipase L2; Provisional
Probab=99.29 E-value=1.7e-10 Score=115.52 Aligned_cols=253 Identities=13% Similarity=0.081 Sum_probs=139.1
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCc
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY 179 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy 179 (427)
.|..|+|+.+... ..+|+||.+||-.+.+... .-+. +.. . .+-++++-+|.| |+|.|.
T Consensus 39 ~g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~y-~~~~---~~l----------~----~~g~~v~~~D~~-G~G~S~ 96 (330)
T PRK10749 39 DDIPIRFVRFRAP---HHDRVVVICPGRIESYVKY-AELA---YDL----------F----HLGYDVLIIDHR-GQGRSG 96 (330)
T ss_pred CCCEEEEEEccCC---CCCcEEEEECCccchHHHH-HHHH---HHH----------H----HCCCeEEEEcCC-CCCCCC
Confidence 3467888776532 4468999999985544332 2221 100 0 134789999997 999996
Q ss_pred CCCCC---CCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeec
Q 041833 180 SNTSS---DITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVG 256 (427)
Q Consensus 180 ~~~~~---~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ig 256 (427)
..... ... .+.+..++|+..+++...+. +...+++++|||+||..+..+|.. . +-.++++++.
T Consensus 97 ~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~---~~~~~~~l~GhSmGG~ia~~~a~~----~------p~~v~~lvl~ 162 (330)
T PRK10749 97 RLLDDPHRGHV-ERFNDYVDDLAAFWQQEIQP---GPYRKRYALAHSMGGAILTLFLQR----H------PGVFDAIALC 162 (330)
T ss_pred CCCCCCCcCcc-ccHHHHHHHHHHHHHHHHhc---CCCCCeEEEEEcHHHHHHHHHHHh----C------CCCcceEEEE
Confidence 43211 111 15677788888887765443 345689999999999766555542 1 3457899999
Q ss_pred cCccCcccccch-h----hhHhhhc---------------------ccC--CHHHHHHHHHhh-hccCC-C--CCchhHH
Q 041833 257 NALTDDYHDYLG-L----FQFWWSA---------------------GLI--SDDTYKQLNLLC-DYESF-V--HPSSSCD 304 (427)
Q Consensus 257 n~~id~~~~~~~-~----~~f~~~~---------------------glI--~~~~~~~l~~~C-~~~~~-~--~~~~~C~ 304 (427)
+|.......... . ...+... ..+ +++.++.+.+.. ..... . .......
T Consensus 163 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (330)
T PRK10749 163 APMFGIVLPLPSWMARRILNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVR 242 (330)
T ss_pred CchhccCCCCCcHHHHHHHHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHH
Confidence 987542111110 0 0000000 000 122221111110 00000 0 0000000
Q ss_pred HHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeE
Q 041833 305 KVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLT 384 (427)
Q Consensus 305 ~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Lt 384 (427)
..+.......... -.+ .++.||++|+.|.+++..+++.+.+.++-.+. ...+.+
T Consensus 243 ~~~~~~~~~~~~~--~~i-------~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~-----------------~~~~~~ 296 (330)
T PRK10749 243 ESILAGEQVLAGA--GDI-------TTPLLLLQAEEERVVDNRMHDRFCEARTAAGH-----------------PCEGGK 296 (330)
T ss_pred HHHHHHHHHHhhc--cCC-------CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCC-----------------CCCCce
Confidence 1111000000000 111 23578999999999999999988887742211 112346
Q ss_pred EEEECCCCCcCCcCCc---HHHHHHHHHHHcCC
Q 041833 385 FVTVRGAGHEVPLHRP---KPALTLIKSFLSGR 414 (427)
Q Consensus 385 fv~V~gAGHmvP~dqP---e~~~~mi~~fL~g~ 414 (427)
+++++||||++..++| +.+++-|.+||..+
T Consensus 297 l~~~~gagH~~~~E~~~~r~~v~~~i~~fl~~~ 329 (330)
T PRK10749 297 PLVIKGAYHEILFEKDAMRSVALNAIVDFFNRH 329 (330)
T ss_pred EEEeCCCcchhhhCCcHHHHHHHHHHHHHHhhc
Confidence 8999999999999987 55777778888654
No 35
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.27 E-value=1.4e-10 Score=113.72 Aligned_cols=261 Identities=16% Similarity=0.138 Sum_probs=158.8
Q ss_pred eEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcccc-ceE
Q 041833 88 AHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQV-ANI 166 (427)
Q Consensus 88 ~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~-anv 166 (427)
....+|++++. +++++.|. .+.+.|++|.|||=|=.+-.+. ..... .... ..+
T Consensus 21 ~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr------------~q~~~-------la~~~~rv 74 (322)
T KOG4178|consen 21 AISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWR------------HQIPG-------LASRGYRV 74 (322)
T ss_pred hcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhh------------hhhhh-------hhhcceEE
Confidence 45567888742 78888887 7899999999999997665541 00000 1122 789
Q ss_pred EEEeCCCCcccCcCCCC-CCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCC
Q 041833 167 LFLDSPVGVGFSYSNTS-SDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGE 245 (427)
Q Consensus 167 lfiDqP~G~GfSy~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~ 245 (427)
|.+|.+ |.|+|..... ..| +.+..+.|+..+|. .+...+++++||+||++.+=.||....++..
T Consensus 75 iA~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld-------~Lg~~k~~lvgHDwGaivaw~la~~~Perv~---- 139 (322)
T KOG4178|consen 75 IAPDLR-GYGFSDAPPHISEY---TIDELVGDIVALLD-------HLGLKKAFLVGHDWGAIVAWRLALFYPERVD---- 139 (322)
T ss_pred EecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHH-------HhccceeEEEeccchhHHHHHHHHhChhhcc----
Confidence 999996 9999987665 344 77888888888877 3667799999999999999999987766542
Q ss_pred cceecceeeeccCccCcccccc-----hhhhHhhhcccCCHHHHH----HHHHhhhccCCC---------CCchhHHHHH
Q 041833 246 KAINLKGYMVGNALTDDYHDYL-----GLFQFWWSAGLISDDTYK----QLNLLCDYESFV---------HPSSSCDKVL 307 (427)
Q Consensus 246 ~~inLkGi~ign~~id~~~~~~-----~~~~f~~~~glI~~~~~~----~l~~~C~~~~~~---------~~~~~C~~~~ 307 (427)
.-+++.+... ||..++..... .++.+.++.....+..+. .+...|...+.. .....|-...
T Consensus 140 ~lv~~nv~~~-~p~~~~~~~~~~~f~~~~y~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~ 218 (322)
T KOG4178|consen 140 GLVTLNVPFP-NPKLKPLDSSKAIFGKSYYICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTE 218 (322)
T ss_pred eEEEecCCCC-CcccchhhhhccccCccceeEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhH
Confidence 1233333333 66666654332 233333333333333221 122233321110 0111222111
Q ss_pred HHHH--h-------hcCCcccccc-c-cccccc------ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeC
Q 041833 308 EVAD--N-------ELGNIDQYNR-D-LLTFLV------LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDE 370 (427)
Q Consensus 308 ~~~~--~-------~~g~in~Ydi-~-~p~~lp------~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~ 370 (427)
..+. . .++.+|.|.- . .....| .++.+++.|+.|.++++..-.+..+.+
T Consensus 219 edi~~~~~~f~~~g~~gplNyyrn~~r~w~a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~-------------- 284 (322)
T KOG4178|consen 219 EDIAFYVSKFQIDGFTGPLNYYRNFRRNWEAAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKD-------------- 284 (322)
T ss_pred HHHHHHHhccccccccccchhhHHHhhCchhccccccccccceEEEEecCcccccchhHHHHHHHh--------------
Confidence 1111 1 2344555532 1 110111 345679999999999998333332221
Q ss_pred CceeeeeeeecCe-EEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 371 GQVGGWTQEYSGL-TFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 371 ~~v~Gy~k~y~~L-tfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
..++ .-++++++||.+++|+|+++.++|..||+.
T Consensus 285 ---------vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~~~ 319 (322)
T KOG4178|consen 285 ---------VPRLTERVVIEGIGHFVQQEKPQEVNQAILGFINS 319 (322)
T ss_pred ---------hccccceEEecCCcccccccCHHHHHHHHHHHHHh
Confidence 1111 348899999999999999999999999863
No 36
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.26 E-value=1.3e-10 Score=121.80 Aligned_cols=262 Identities=14% Similarity=0.091 Sum_probs=141.4
Q ss_pred eEEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhh-hhhcCCeEEcCCCCceeeCCCCccccceE
Q 041833 88 AHYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGE-AEEIGPFHIKPDGKTLYLNPYSWNQVANI 166 (427)
Q Consensus 88 ~~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~-~~e~GP~~~~~~~~~l~~n~~sW~~~anv 166 (427)
+.-.-|++.++ ..|||+...... +..+|.||+|||.+|.+..+ .. +.. .+.. .+.+.+.+
T Consensus 175 ~~~~~~~~~~~---~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W-~~~~~~-----------~L~~---~~~~~yrV 235 (481)
T PLN03087 175 KFCTSWLSSSN---ESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFW-TETLFP-----------NFSD---AAKSTYRL 235 (481)
T ss_pred ceeeeeEeeCC---eEEEEEEecCCC-CCCCCeEEEECCCCccHHHH-HHHHHH-----------HHHH---HhhCCCEE
Confidence 34446776643 578887655432 23357899999999888775 31 100 0000 12356899
Q ss_pred EEEeCCCCcccCcCCCCCCCccCChHHHHHHHH-HHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCC
Q 041833 167 LFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSL-KFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGE 245 (427)
Q Consensus 167 lfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~-~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~ 245 (427)
+.+|.| |+|.|.......+ +.++.++++. .++. ++...+++|+|||+||.++-.+|.+..
T Consensus 236 ia~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~~~ll~-------~lg~~k~~LVGhSmGG~iAl~~A~~~P-------- 296 (481)
T PLN03087 236 FAVDLL-GFGRSPKPADSLY---TLREHLEMIERSVLE-------RYKVKSFHIVAHSLGCILALALAVKHP-------- 296 (481)
T ss_pred EEECCC-CCCCCcCCCCCcC---CHHHHHHHHHHHHHH-------HcCCCCEEEEEECHHHHHHHHHHHhCh--------
Confidence 999998 9999964322222 5566666663 3333 245668999999999988877776432
Q ss_pred cceecceeeeccCccCcccccchhhhHhhh----cccC-----CH---HHHHHHHHh-----hhccC---------CCC-
Q 041833 246 KAINLKGYMVGNALTDDYHDYLGLFQFWWS----AGLI-----SD---DTYKQLNLL-----CDYES---------FVH- 298 (427)
Q Consensus 246 ~~inLkGi~ign~~id~~~~~~~~~~f~~~----~glI-----~~---~~~~~l~~~-----C~~~~---------~~~- 298 (427)
-.++++++.++...+.........++.. .... .. ..++.+.+. |.... ...
T Consensus 297 --e~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 374 (481)
T PLN03087 297 --GAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPPIAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNR 374 (481)
T ss_pred --HhccEEEEECCCccccccchhHHHHHHHHhcccccCCccccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhh
Confidence 3478888877543211100000001000 0000 00 001111110 00000 000
Q ss_pred Cchh------HH---HHHHHHHhhcCCc-cccccccccccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCcccee
Q 041833 299 PSSS------CD---KVLEVADNELGNI-DQYNRDLLTFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRA 366 (427)
Q Consensus 299 ~~~~------C~---~~~~~~~~~~g~i-n~Ydi~~p~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~ 366 (427)
.... |. .....+....... ...+-....+++ ..+.||+.|+.|.++|....+.+.+.+.
T Consensus 375 ~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP--------- 445 (481)
T PLN03087 375 MRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVRDQLKCDVAIFHGGDDELIPVECSYAVKAKVP--------- 445 (481)
T ss_pred hhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHHHhCCCCEEEEEECCCCCCCHHHHHHHHHhCC---------
Confidence 0000 00 0000000000000 000000010122 2457899999999999999888877664
Q ss_pred eeeCCceeeeeeeecCeEEEEECCCCCcCCc-CCcHHHHHHHHHHHcC
Q 041833 367 WYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL-HRPKPALTLIKSFLSG 413 (427)
Q Consensus 367 w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~-dqPe~~~~mi~~fL~g 413 (427)
+.++++|++|||+.++ ++|+...+.|.+|...
T Consensus 446 ---------------~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~~~ 478 (481)
T PLN03087 446 ---------------RARVKVIDDKDHITIVVGRQKEFARELEEIWRR 478 (481)
T ss_pred ---------------CCEEEEeCCCCCcchhhcCHHHHHHHHHHHhhc
Confidence 2367999999999996 9999999999999864
No 37
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.26 E-value=6.5e-10 Score=114.22 Aligned_cols=250 Identities=16% Similarity=0.106 Sum_probs=142.6
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCc
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY 179 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy 179 (427)
.+..+|++.+.... .+.+|+||++||.++.+... -.+.+ .+. .+-++++.+|.| |+|.|.
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~~-~~~a~-----------~L~------~~Gy~V~~~D~r-GhG~S~ 178 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGRY-LHFAK-----------QLT------SCGFGVYAMDWI-GHGGSD 178 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHHH-HHHHH-----------HHH------HCCCEEEEeCCC-CCCCCC
Confidence 34688887776532 34468999999997765543 22222 010 134789999997 999997
Q ss_pred CCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 180 SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
... .+. .+.+..++|+.++++..-..+| ..+++|+|||+||..+..++. +. +..-.++|+++.+|+
T Consensus 179 ~~~--~~~-~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p----~~~~~v~glVL~sP~ 244 (395)
T PLN02652 179 GLH--GYV-PSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YP----SIEDKLEGIVLTSPA 244 (395)
T ss_pred CCC--CCC-cCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----cc----CcccccceEEEECcc
Confidence 542 222 2566778888888876655443 448999999999976654442 11 112358999999998
Q ss_pred cCcccccch--hhhHhhh---------c----cc-CCHHHHHHHHHhhhccCCCCCc--hhHHHHHHHHHhhcCCccccc
Q 041833 260 TDDYHDYLG--LFQFWWS---------A----GL-ISDDTYKQLNLLCDYESFVHPS--SSCDKVLEVADNELGNIDQYN 321 (427)
Q Consensus 260 id~~~~~~~--~~~f~~~---------~----gl-I~~~~~~~l~~~C~~~~~~~~~--~~C~~~~~~~~~~~g~in~Yd 321 (427)
++....... ....+.. . +. +............+........ ................ .-+
T Consensus 245 l~~~~~~~~~~~~~~l~~~~~p~~~~~~~~~~~~~~s~~~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~~~l~~~--L~~ 322 (395)
T PLN02652 245 LRVKPAHPIVGAVAPIFSLVAPRFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLTRN--FKS 322 (395)
T ss_pred cccccchHHHHHHHHHHHHhCCCCcccCcccccCCcCCCHHHHHHHhcCCCcccCCchHHHHHHHHHHHHHHHhh--ccc
Confidence 754321100 0000000 0 00 0000000001111110000000 0000000000000000 011
Q ss_pred ccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcC-Cc
Q 041833 322 RDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLH-RP 400 (427)
Q Consensus 322 i~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~d-qP 400 (427)
| .++.||++|+.|.++|+..++++.+.+.-..+ ++..+++++|++..+ +|
T Consensus 323 I-------~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k----------------------~l~~~~ga~H~l~~e~~~ 373 (395)
T PLN02652 323 V-------TVPFMVLHGTADRVTDPLASQDLYNEAASRHK----------------------DIKLYDGFLHDLLFEPER 373 (395)
T ss_pred C-------CCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCc----------------------eEEEECCCeEEeccCCCH
Confidence 1 14578999999999999999999887643222 567799999999777 79
Q ss_pred HHHHHHHHHHHcCC
Q 041833 401 KPALTLIKSFLSGR 414 (427)
Q Consensus 401 e~~~~mi~~fL~g~ 414 (427)
+++++.+..||.+.
T Consensus 374 e~v~~~I~~FL~~~ 387 (395)
T PLN02652 374 EEVGRDIIDWMEKR 387 (395)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999864
No 38
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.26 E-value=2.4e-10 Score=117.81 Aligned_cols=109 Identities=12% Similarity=0.155 Sum_probs=70.7
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
..+|.||+|||.++.+..+ ....+ .+.+.++++.+|.| |.|.|.... ..+. +.++..
T Consensus 103 ~~~p~vvllHG~~~~~~~~-~~~~~------------------~L~~~~~vi~~D~r-G~G~S~~~~-~~~~--~~~~~~ 159 (402)
T PLN02894 103 EDAPTLVMVHGYGASQGFF-FRNFD------------------ALASRFRVIAIDQL-GWGGSSRPD-FTCK--STEETE 159 (402)
T ss_pred CCCCEEEEECCCCcchhHH-HHHHH------------------HHHhCCEEEEECCC-CCCCCCCCC-cccc--cHHHHH
Confidence 4679999999997766554 21111 12244789999997 999985422 1111 233444
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
+.+.+.+.+|.+. ....+++|+|||+||..+..+|.+. +..++++++.+|..
T Consensus 160 ~~~~~~i~~~~~~---l~~~~~~lvGhS~GG~la~~~a~~~----------p~~v~~lvl~~p~~ 211 (402)
T PLN02894 160 AWFIDSFEEWRKA---KNLSNFILLGHSFGGYVAAKYALKH----------PEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHHHHHH---cCCCCeEEEEECHHHHHHHHHHHhC----------chhhcEEEEECCcc
Confidence 4555566666653 3445899999999997666666532 44588888888764
No 39
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.23 E-value=6.2e-10 Score=112.07 Aligned_cols=224 Identities=18% Similarity=0.132 Sum_probs=122.3
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
.+.|.||++||.+|.+..+ ..+.+ .| .+.++++-+|.| |+|.|..... . .+.++.+
T Consensus 129 ~~~~~vl~~HG~~~~~~~~-~~~~~-----------~l-------~~~~~v~~~d~~-g~G~s~~~~~--~--~~~~~~~ 184 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNNW-LFNHA-----------AL-------AAGRPVIALDLP-GHGASSKAVG--A--GSLDELA 184 (371)
T ss_pred CCCCeEEEECCCCCccchH-HHHHH-----------HH-------hcCCEEEEEcCC-CCCCCCCCCC--C--CCHHHHH
Confidence 4568899999998887775 44433 11 123789999998 9999853221 1 2566667
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC-cccccchhhhHhh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD-DYHDYLGLFQFWW 274 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id-~~~~~~~~~~f~~ 274 (427)
+++..+++. +...+++|+|+|+||.++..+|... +..++++++.+|... +.........+..
T Consensus 185 ~~~~~~~~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~----------~~~v~~lv~~~~~~~~~~~~~~~~~~~~~ 247 (371)
T PRK14875 185 AAVLAFLDA-------LGIERAHLVGHSMGGAVALRLAARA----------PQRVASLTLIAPAGLGPEINGDYIDGFVA 247 (371)
T ss_pred HHHHHHHHh-------cCCccEEEEeechHHHHHHHHHHhC----------chheeEEEEECcCCcCcccchhHHHHhhc
Confidence 777666652 4456899999999998887777642 334777777666421 1111000000000
Q ss_pred hcccCCHHHHHHHHHhhhccCCCCCc-------------hhHHHHHHHHHhh--cCCccccccccccccc--ccceeEEe
Q 041833 275 SAGLISDDTYKQLNLLCDYESFVHPS-------------SSCDKVLEVADNE--LGNIDQYNRDLLTFLV--LFDFLYDS 337 (427)
Q Consensus 275 ~~glI~~~~~~~l~~~C~~~~~~~~~-------------~~C~~~~~~~~~~--~g~in~Ydi~~p~~lp--~i~~Liy~ 337 (427)
. -....+............ ... ......+..+... ......++... .+. ..+.|++.
T Consensus 248 ~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~i~~Pvlii~ 321 (371)
T PRK14875 248 A---ESRRELKPVLELLFADPA-LVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRD--RLASLAIPVLVIW 321 (371)
T ss_pred c---cchhHHHHHHHHHhcChh-hCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHH--HHhcCCCCEEEEE
Confidence 0 000001000000000000 000 0000011111000 00011111110 011 24578999
Q ss_pred CCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 338 GDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 338 Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
|+.|.++|....+. + +.++++.+++++||+.+.++|+...+.|.+||.+
T Consensus 322 g~~D~~vp~~~~~~----l-----------------------~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl~~ 370 (371)
T PRK14875 322 GEQDRIIPAAHAQG----L-----------------------PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFLGK 370 (371)
T ss_pred ECCCCccCHHHHhh----c-----------------------cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHhcc
Confidence 99999998764332 1 1235778999999999999999999999999965
No 40
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.21 E-value=8.5e-10 Score=109.09 Aligned_cols=126 Identities=22% Similarity=0.360 Sum_probs=79.0
Q ss_pred EeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEe
Q 041833 91 SGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLD 170 (427)
Q Consensus 91 sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiD 170 (427)
.+|+.+.+ +.+|+|.-. ..+. .|.||++||+||.+... ... . . .+ .+.++||.+|
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~-~-----------~--~~----~~~~~vi~~D 60 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCR-R-----------F--FD----PETYRIVLFD 60 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHH-h-----------c--cC----ccCCEEEEEC
Confidence 36888764 467887532 2223 45578899999876542 110 0 0 00 1458999999
Q ss_pred CCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceec
Q 041833 171 SPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINL 250 (427)
Q Consensus 171 qP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inL 250 (427)
+| |.|.|..... ... .+.++.++|+..+++. ++..+++++|+||||.++..+|.+. +-.+
T Consensus 61 ~~-G~G~S~~~~~-~~~-~~~~~~~~dl~~l~~~-------l~~~~~~lvG~S~GG~ia~~~a~~~----------p~~v 120 (306)
T TIGR01249 61 QR-GCGKSTPHAC-LEE-NTTWDLVADIEKLREK-------LGIKNWLVFGGSWGSTLALAYAQTH----------PEVV 120 (306)
T ss_pred CC-CCCCCCCCCC-ccc-CCHHHHHHHHHHHHHH-------cCCCCEEEEEECHHHHHHHHHHHHC----------hHhh
Confidence 97 9999974321 111 2455666666655542 3446799999999997777776643 2336
Q ss_pred ceeeeccCccC
Q 041833 251 KGYMVGNALTD 261 (427)
Q Consensus 251 kGi~ign~~id 261 (427)
+++++.++.+.
T Consensus 121 ~~lvl~~~~~~ 131 (306)
T TIGR01249 121 TGLVLRGIFLL 131 (306)
T ss_pred hhheeeccccC
Confidence 77777776543
No 41
>PRK07581 hypothetical protein; Validated
Probab=99.20 E-value=7.8e-10 Score=110.78 Aligned_cols=58 Identities=12% Similarity=0.123 Sum_probs=50.5
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECC-CCCcCCcCCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRG-AGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~g-AGHmvP~dqPe~~~~mi~~ 409 (427)
.+.|++.|+.|..+|....+.+.+.+. +.++++|++ +||+++.+||+....+|++
T Consensus 276 ~PtLvI~G~~D~~~p~~~~~~l~~~ip------------------------~a~l~~i~~~~GH~~~~~~~~~~~~~~~~ 331 (339)
T PRK07581 276 AKTFVMPISTDLYFPPEDCEAEAALIP------------------------NAELRPIESIWGHLAGFGQNPADIAFIDA 331 (339)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHhCC------------------------CCeEEEeCCCCCccccccCcHHHHHHHHH
Confidence 457899999999999998888877663 336789999 9999999999999999999
Q ss_pred HHc
Q 041833 410 FLS 412 (427)
Q Consensus 410 fL~ 412 (427)
||.
T Consensus 332 ~~~ 334 (339)
T PRK07581 332 ALK 334 (339)
T ss_pred HHH
Confidence 985
No 42
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.15 E-value=1.6e-09 Score=106.81 Aligned_cols=120 Identities=13% Similarity=0.237 Sum_probs=79.1
Q ss_pred EEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCC
Q 041833 107 WFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDI 186 (427)
Q Consensus 107 ~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~ 186 (427)
|.++-...+..++-++.+||=-+.+.++ ..|-.+..+..||..||+| |.|+|....-. .
T Consensus 79 w~~~~~~~~~~~~plVliHGyGAg~g~f-------------------~~Nf~~La~~~~vyaiDll-G~G~SSRP~F~-~ 137 (365)
T KOG4409|consen 79 WTITVSNESANKTPLVLIHGYGAGLGLF-------------------FRNFDDLAKIRNVYAIDLL-GFGRSSRPKFS-I 137 (365)
T ss_pred EEEeecccccCCCcEEEEeccchhHHHH-------------------HHhhhhhhhcCceEEeccc-CCCCCCCCCCC-C
Confidence 4444444557777888899853333332 1344445568899999998 99999754321 1
Q ss_pred ccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 187 TTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 187 ~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
+.+..-..+.+-+.+|... .+-.+.+|+|||+||-.....|.+. +-.++-+++.+|+--+.
T Consensus 138 ---d~~~~e~~fvesiE~WR~~---~~L~KmilvGHSfGGYLaa~YAlKy----------PerV~kLiLvsP~Gf~~ 198 (365)
T KOG4409|consen 138 ---DPTTAEKEFVESIEQWRKK---MGLEKMILVGHSFGGYLAAKYALKY----------PERVEKLILVSPWGFPE 198 (365)
T ss_pred ---CcccchHHHHHHHHHHHHH---cCCcceeEeeccchHHHHHHHHHhC----------hHhhceEEEeccccccc
Confidence 2223344788888999876 4456899999999994444444433 34488899999986554
No 43
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.14 E-value=6.1e-09 Score=104.58 Aligned_cols=273 Identities=14% Similarity=0.132 Sum_probs=144.7
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhh-------cCCeEEcCCCCceeeC---CCCc-cccceEEE
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEE-------IGPFHIKPDGKTLYLN---PYSW-NQVANILF 168 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e-------~GP~~~~~~~~~l~~n---~~sW-~~~anvlf 168 (427)
.|..|+++..+.+ ..+-+|+.+||==+-+ .. -.+.- -+|+.++.+.. ..++ -... .+-.+|+.
T Consensus 6 ~g~~l~~~~~~~~---~~kg~v~i~HG~~eh~-~~-~~~~~~~~~~~~~~~~~~~~~ry-~~y~~~~~~~l~~~G~~V~~ 79 (332)
T TIGR01607 6 DGLLLKTYSWIVK---NAIGIIVLIHGLKSHL-RL-QFLKINAKIVNNDRAVLIDTDNY-YIYKDSWIENFNKNGYSVYG 79 (332)
T ss_pred CCCeEEEeeeecc---CCeEEEEEECCCchhh-hh-hhhhcCcccCCCCeeEEEcCCcc-eEeeHHHHHHHHHCCCcEEE
Confidence 4567888766643 3457999999853333 21 11111 13344432210 0011 0112 24589999
Q ss_pred EeCCCCcccCcCCCC-CCCccCChHHHHHHHHHHHHHHHHHc----------------cCCC-CCCeEEecCCcCccchH
Q 041833 169 LDSPVGVGFSYSNTS-SDITTNGDKRTAEDSLKFLLKWLERF----------------SQFK-GRDFYISGESYGGHYVP 230 (427)
Q Consensus 169 iDqP~G~GfSy~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~f----------------p~~~-~~~~yI~GESYGG~yvP 230 (427)
+|+| |+|.|.+.+. ..+. .+.++.++|+..+++...+.. .++. +.|+||+|||+||..+.
T Consensus 80 ~D~r-GHG~S~~~~~~~g~~-~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~ 157 (332)
T TIGR01607 80 LDLQ-GHGESDGLQNLRGHI-NCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIAL 157 (332)
T ss_pred eccc-ccCCCccccccccch-hhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHH
Confidence 9997 9999986432 1121 266778888888887654310 0233 56999999999997766
Q ss_pred HHHHHHHHhhhhcCCcceecceeeeccCccCccccc-------c----hhhhHhhhc--cc-C------CH--HHHHHHH
Q 041833 231 QLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDY-------L----GLFQFWWSA--GL-I------SD--DTYKQLN 288 (427)
Q Consensus 231 ~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~-------~----~~~~f~~~~--gl-I------~~--~~~~~l~ 288 (427)
.++..+.+... ......++|+++..|++...... . .....+... .+ + +. ...+.+.
T Consensus 158 ~~~~~~~~~~~--~~~~~~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 235 (332)
T TIGR01607 158 RLLELLGKSNE--NNDKLNIKGCISLSGMISIKSVGSDDSFKFKYFYLPVMNFMSRVFPTFRISKKIRYEKSPYVNDIIK 235 (332)
T ss_pred HHHHHhccccc--cccccccceEEEeccceEEecccCCCcchhhhhHHHHHHHHHHHCCcccccCccccccChhhhhHHh
Confidence 65554322110 00124689998888776432110 0 000000000 00 0 00 0001100
Q ss_pred HhhhccCC-CCCchhHHHHHHHHHhhcCCccccccccccccc-ccceeEEeCCCCcccChhhHHHHHHhcCCCCCcccee
Q 041833 289 LLCDYESF-VHPSSSCDKVLEVADNELGNIDQYNRDLLTFLV-LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRA 366 (427)
Q Consensus 289 ~~C~~~~~-~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp-~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~ 366 (427)
....... .........+++.......... -++ .++.|+++|+.|.+++...++.+.+.+.-+.+
T Consensus 236 -~Dp~~~~~~~s~~~~~~l~~~~~~~~~~~~--------~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~----- 301 (332)
T TIGR01607 236 -FDKFRYDGGITFNLASELIKATDTLDCDID--------YIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNK----- 301 (332)
T ss_pred -cCccccCCcccHHHHHHHHHHHHHHHhhHh--------hCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCc-----
Confidence 0000000 0001111111211111100000 111 35688999999999999999998887654322
Q ss_pred eeeCCceeeeeeeecCeEEEEECCCCCcCCcCC-cHHHHHHHHHHHcC
Q 041833 367 WYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHR-PKPALTLIKSFLSG 413 (427)
Q Consensus 367 w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dq-Pe~~~~mi~~fL~g 413 (427)
++..+++++|++..+. ++.+++-|..||.+
T Consensus 302 -----------------~l~~~~g~~H~i~~E~~~~~v~~~i~~wL~~ 332 (332)
T TIGR01607 302 -----------------ELHTLEDMDHVITIEPGNEEVLKKIIEWISN 332 (332)
T ss_pred -----------------EEEEECCCCCCCccCCCHHHHHHHHHHHhhC
Confidence 6788999999999985 68899999999864
No 44
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.05 E-value=1.3e-08 Score=103.99 Aligned_cols=64 Identities=23% Similarity=0.295 Sum_probs=51.8
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEEC-CCCCcCCcCCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVR-GAGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~-gAGHmvP~dqPe~~~~mi~~ 409 (427)
.+.||+.|+.|.++|....++..+.|.-.+. ..+++.|. ++||++++++|++..++|.+
T Consensus 310 ~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~--------------------~~~l~~i~~~~GH~~~le~p~~~~~~L~~ 369 (379)
T PRK00175 310 ARFLVVSFTSDWLFPPARSREIVDALLAAGA--------------------DVSYAEIDSPYGHDAFLLDDPRYGRLVRA 369 (379)
T ss_pred CCEEEEEECCccccCHHHHHHHHHHHHhcCC--------------------CeEEEEeCCCCCchhHhcCHHHHHHHHHH
Confidence 3578999999999999988888777742211 23677785 99999999999999999999
Q ss_pred HHcCC
Q 041833 410 FLSGR 414 (427)
Q Consensus 410 fL~g~ 414 (427)
||.+.
T Consensus 370 FL~~~ 374 (379)
T PRK00175 370 FLERA 374 (379)
T ss_pred HHHhh
Confidence 99763
No 45
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.03 E-value=9.4e-09 Score=100.32 Aligned_cols=226 Identities=12% Similarity=0.053 Sum_probs=123.7
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
.++|.||++||..+.++.+ ..+.+ .|.. +-++++.+|.| |+|.|...... . .+.++.+
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~~~-----------~L~~------~g~~vi~~dl~-g~G~s~~~~~~-~--~~~~~~~ 73 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKIRC-----------LMEN------SGYKVTCIDLK-SAGIDQSDADS-V--TTFDEYN 73 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHHHH-----------HHHh------CCCEEEEeccc-CCCCCCCCccc-C--CCHHHHH
Confidence 5679999999987766665 32221 0111 23799999998 99987543221 1 1667777
Q ss_pred HHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccc--ccchhhhH
Q 041833 196 EDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYH--DYLGLFQF 272 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~--~~~~~~~f 272 (427)
+++.++|+. + ..++++|+||||||..+..++.+. +-.++++++.++..-+.- ....+...
T Consensus 74 ~~l~~~i~~-------l~~~~~v~lvGhS~GG~v~~~~a~~~----------p~~v~~lv~~~~~~~~~g~~~~~~~~~~ 136 (273)
T PLN02211 74 KPLIDFLSS-------LPENEKVILVGHSAGGLSVTQAIHRF----------PKKICLAVYVAATMLKLGFQTDEDMKDG 136 (273)
T ss_pred HHHHHHHHh-------cCCCCCEEEEEECchHHHHHHHHHhC----------hhheeEEEEeccccCCCCCCHHHHHhcc
Confidence 777766653 2 246999999999998777776543 223677777766432110 00000000
Q ss_pred ---hh----------hc--------ccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhh-cCCccccccccccccc-
Q 041833 273 ---WW----------SA--------GLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNE-LGNIDQYNRDLLTFLV- 329 (427)
Q Consensus 273 ---~~----------~~--------glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~-~g~in~Ydi~~p~~lp- 329 (427)
+. .. ..+..+....+. +.. ................ ..-+...+... ..+
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 208 (273)
T PLN02211 137 VPDLSEFGDVYELGFGLGPDQPPTSAIIKKEFRRKIL----YQM--SPQEDSTLAAMLLRPGPILALRSARFEE--ETGD 208 (273)
T ss_pred ccchhhhccceeeeeccCCCCCCceeeeCHHHHHHHH----hcC--CCHHHHHHHHHhcCCcCccccccccccc--cccc
Confidence 00 00 001111111110 000 0000011010100000 00011111100 011
Q ss_pred --ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHH
Q 041833 330 --LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLI 407 (427)
Q Consensus 330 --~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi 407 (427)
.++.+++.|..|.++|..-.+++++.+.- .+++++. +||++++++|+...++|
T Consensus 209 ~~~vP~l~I~g~~D~~ip~~~~~~m~~~~~~------------------------~~~~~l~-~gH~p~ls~P~~~~~~i 263 (273)
T PLN02211 209 IDKVPRVYIKTLHDHVVKPEQQEAMIKRWPP------------------------SQVYELE-SDHSPFFSTPFLLFGLL 263 (273)
T ss_pred cCccceEEEEeCCCCCCCHHHHHHHHHhCCc------------------------cEEEEEC-CCCCccccCHHHHHHHH
Confidence 24678999999999999988888876641 1457775 89999999999999999
Q ss_pred HHHHcC
Q 041833 408 KSFLSG 413 (427)
Q Consensus 408 ~~fL~g 413 (427)
.+....
T Consensus 264 ~~~a~~ 269 (273)
T PLN02211 264 IKAAAS 269 (273)
T ss_pred HHHHHH
Confidence 987643
No 46
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.02 E-value=2.6e-09 Score=126.81 Aligned_cols=241 Identities=15% Similarity=0.124 Sum_probs=128.6
Q ss_pred CCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCC-----CCCccC
Q 041833 115 PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTS-----SDITTN 189 (427)
Q Consensus 115 p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~-----~~~~~~ 189 (427)
....|.||+|||.+|.+..+ -.+.+ .+ .+.++++.+|.| |.|.|..... .... .
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w-~~~~~-----------~L-------~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~~-~ 1426 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDW-IPIMK-----------AI-------SGSARCISIDLP-GHGGSKIQNHAKETQTEPT-L 1426 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHH-HHHHH-----------HH-------hCCCEEEEEcCC-CCCCCCCcccccccccccc-C
Confidence 34578999999999988876 33322 11 234799999998 9999864321 0111 1
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC--ccccc-
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD--DYHDY- 266 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id--~~~~~- 266 (427)
+.+..++++.++++. +...+++|+|+|+||..+-.+|.+. +-.++++++.++... .....
T Consensus 1427 si~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~----------P~~V~~lVlis~~p~~~~~~~~~ 1489 (1655)
T PLN02980 1427 SVELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRF----------SDKIEGAVIISGSPGLKDEVARK 1489 (1655)
T ss_pred CHHHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhC----------hHhhCEEEEECCCCccCchHHHH
Confidence 566777777776653 4456899999999998777777643 334778877665422 11000
Q ss_pred -c-----hhhhHhhhcccCCHHHHHHHHHhh-hccC--CCCCchhHHHHH-------------HHHHhhcCCcccccccc
Q 041833 267 -L-----GLFQFWWSAGLISDDTYKQLNLLC-DYES--FVHPSSSCDKVL-------------EVADNELGNIDQYNRDL 324 (427)
Q Consensus 267 -~-----~~~~f~~~~glI~~~~~~~l~~~C-~~~~--~~~~~~~C~~~~-------------~~~~~~~g~in~Ydi~~ 324 (427)
. .....+...+ .+.+.... .... ............ ..+... ......++..
T Consensus 1490 ~~~~~~~~~~~~l~~~g------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~~~~~~dl~~ 1562 (1655)
T PLN02980 1490 IRSAKDDSRARMLIDHG------LEIFLENWYSGELWKSLRNHPHFNKIVASRLLHKDVPSLAKLLSDL-SIGRQPSLWE 1562 (1655)
T ss_pred HHhhhhhHHHHHHHhhh------HHHHHHHhccHHHhhhhccCHHHHHHHHHHHhcCCHHHHHHHHHHh-hhcccchHHH
Confidence 0 0000000000 00000000 0000 000000000000 000000 0000011110
Q ss_pred ccccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHH
Q 041833 325 LTFLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKP 402 (427)
Q Consensus 325 p~~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~ 402 (427)
.++ ..+.|++.|+.|.+++ ...+++.+.|.-.... +--...++.++++|++|||+++.++|+.
T Consensus 1563 --~L~~I~~PtLlI~Ge~D~~~~-~~a~~~~~~i~~a~~~------------~~~~~~~~a~lvvI~~aGH~~~lE~Pe~ 1627 (1655)
T PLN02980 1563 --DLKQCDTPLLLVVGEKDVKFK-QIAQKMYREIGKSKES------------GNDKGKEIIEIVEIPNCGHAVHLENPLP 1627 (1655)
T ss_pred --HHhhCCCCEEEEEECCCCccH-HHHHHHHHHccccccc------------cccccccceEEEEECCCCCchHHHCHHH
Confidence 122 1356899999999876 4455565655311000 0000112357899999999999999999
Q ss_pred HHHHHHHHHcCCC
Q 041833 403 ALTLIKSFLSGRS 415 (427)
Q Consensus 403 ~~~mi~~fL~g~~ 415 (427)
..+.|.+||.+..
T Consensus 1628 f~~~I~~FL~~~~ 1640 (1655)
T PLN02980 1628 VIRALRKFLTRLH 1640 (1655)
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998754
No 47
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.01 E-value=2.4e-09 Score=116.26 Aligned_cols=237 Identities=19% Similarity=0.236 Sum_probs=138.5
Q ss_pred EEecCCCCeeEEEEEEeecc-CCCC-CCceEeecCCCCchhHhhh--hhhhcCCeEEcCCCCceeeCCCCccccceEEEE
Q 041833 94 VTVNEESGRALFYWFVEAVE-DPDS-KPLVLWLNGGPGCSSIAYG--EAEEIGPFHIKPDGKTLYLNPYSWNQVANILFL 169 (427)
Q Consensus 94 ~~v~~~~~~~lFy~f~es~~-~p~~-~Pl~lWlnGGPG~Ss~~~g--~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfi 169 (427)
+.+....|..+..|++.-.+ ++.. -|+||++|||| +++. | +..|. ..=..+-+.||++
T Consensus 368 ~~~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~~-~~~~~~~~---------------q~~~~~G~~V~~~ 429 (620)
T COG1506 368 VTYKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQV-GYSFNPEI---------------QVLASAGYAVLAP 429 (620)
T ss_pred EEEEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--cccc-ccccchhh---------------HHHhcCCeEEEEe
Confidence 44444456788888887654 3333 49999999999 4443 3 11111 1112356889999
Q ss_pred eCCCCc-ccCc--CCCC-CCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCC
Q 041833 170 DSPVGV-GFSY--SNTS-SDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGE 245 (427)
Q Consensus 170 DqP~G~-GfSy--~~~~-~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~ 245 (427)
+ |+|+ ||.. .... .++ -....+|+.+++. |++..|..-..++.|+|.|||| +++..++.+.
T Consensus 430 n-~RGS~GyG~~F~~~~~~~~----g~~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGG----ymtl~~~~~~----- 494 (620)
T COG1506 430 N-YRGSTGYGREFADAIRGDW----GGVDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGG----YMTLLAATKT----- 494 (620)
T ss_pred C-CCCCCccHHHHHHhhhhcc----CCccHHHHHHHHH-HHHhCCCcChHHeEEeccChHH----HHHHHHHhcC-----
Confidence 9 4565 4322 1111 111 1235778888888 8999998888899999999999 6666666543
Q ss_pred cceecceeeeccCccCcccccchh-hhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccc
Q 041833 246 KAINLKGYMVGNALTDDYHDYLGL-FQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDL 324 (427)
Q Consensus 246 ~~inLkGi~ign~~id~~~~~~~~-~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~ 324 (427)
. .++..+...+.++........ ..+.. ..++.... ... . ...+...+.....-++..
T Consensus 495 -~-~f~a~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~----~~~-~----~~~~~~~sp~~~~~~i~~ 552 (620)
T COG1506 495 -P-RFKAAVAVAGGVDWLLYFGESTEGLRF-----------DPEENGGG----PPE-D----REKYEDRSPIFYADNIKT 552 (620)
T ss_pred -c-hhheEEeccCcchhhhhccccchhhcC-----------CHHHhCCC----ccc-C----hHHHHhcChhhhhcccCC
Confidence 2 477777777766654322111 11110 00110000 000 0 000001111011112222
Q ss_pred cccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc-CCcHHH
Q 041833 325 LTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL-HRPKPA 403 (427)
Q Consensus 325 p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~-dqPe~~ 403 (427)
+.||++|..|..||...++.+.+.|+-.++ +..++++++.||-... ++-...
T Consensus 553 -------P~LliHG~~D~~v~~~q~~~~~~aL~~~g~--------------------~~~~~~~p~e~H~~~~~~~~~~~ 605 (620)
T COG1506 553 -------PLLLIHGEEDDRVPIEQAEQLVDALKRKGK--------------------PVELVVFPDEGHGFSRPENRVKV 605 (620)
T ss_pred -------CEEEEeecCCccCChHHHHHHHHHHHHcCc--------------------eEEEEEeCCCCcCCCCchhHHHH
Confidence 268999999999999999999999975544 4578999999999887 223334
Q ss_pred HHHHHHHHc
Q 041833 404 LTLIKSFLS 412 (427)
Q Consensus 404 ~~mi~~fL~ 412 (427)
+..+.+|+.
T Consensus 606 ~~~~~~~~~ 614 (620)
T COG1506 606 LKEILDWFK 614 (620)
T ss_pred HHHHHHHHH
Confidence 444444543
No 48
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.00 E-value=7.1e-09 Score=103.90 Aligned_cols=60 Identities=28% Similarity=0.454 Sum_probs=52.3
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSF 410 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~f 410 (427)
.+.||+.|+.|.++|....+...+.+ .|.++..|+++||.++.++|+.....|..|
T Consensus 265 ~pvlii~G~~D~~~p~~~~~~~~~~~------------------------pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~F 320 (326)
T KOG1454|consen 265 CPVLIIWGDKDQIVPLELAEELKKKL------------------------PNAELVEIPGAGHLPHLERPEEVAALLRSF 320 (326)
T ss_pred CceEEEEcCcCCccCHHHHHHHHhhC------------------------CCceEEEeCCCCcccccCCHHHHHHHHHHH
Confidence 34789999999999999777776655 366899999999999999999999999999
Q ss_pred HcCC
Q 041833 411 LSGR 414 (427)
Q Consensus 411 L~g~ 414 (427)
+.+.
T Consensus 321 i~~~ 324 (326)
T KOG1454|consen 321 IARL 324 (326)
T ss_pred HHHh
Confidence 9753
No 49
>PRK05855 short chain dehydrogenase; Validated
Probab=98.97 E-value=1.2e-08 Score=108.75 Aligned_cols=101 Identities=15% Similarity=0.117 Sum_probs=68.5
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
+..|.|+-+. +.+.|.||.+||.++.+..+ .-+.+ . +.+.++++.+|.| |+|.|..
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~w-~~~~~-----------~-------L~~~~~Vi~~D~~-G~G~S~~ 67 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEVW-DGVAP-----------L-------LADRFRVVAYDVR-GAGRSSA 67 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHHH-HHHHH-----------H-------hhcceEEEEecCC-CCCCCCC
Confidence 4677776432 23478999999998777665 43332 1 1234789999998 9999975
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHH
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLS 233 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA 233 (427)
...... .+.++.++|+..+++.. . ...+++|+|||+||..+-.++
T Consensus 68 ~~~~~~--~~~~~~a~dl~~~i~~l-----~-~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 68 PKRTAA--YTLARLADDFAAVIDAV-----S-PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred CCcccc--cCHHHHHHHHHHHHHHh-----C-CCCcEEEEecChHHHHHHHHH
Confidence 432211 26788899999888752 1 134699999999996554444
No 50
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=98.95 E-value=4e-08 Score=99.16 Aligned_cols=62 Identities=27% Similarity=0.348 Sum_probs=48.9
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEE-CCCCCcCCcCCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTV-RGAGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V-~gAGHmvP~dqPe~~~~mi~~ 409 (427)
.+.|++.|+.|.++|....++..+.+.-... ..+|+.| .++||+++.++|++..+.|.+
T Consensus 289 ~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~--------------------~v~~~~i~~~~GH~~~le~p~~~~~~l~~ 348 (351)
T TIGR01392 289 APFLVVSITSDWLFPPAESRELAKALPAAGL--------------------RVTYVEIESPYGHDAFLVETDQVEELIRG 348 (351)
T ss_pred CCEEEEEeCCccccCHHHHHHHHHHHhhcCC--------------------ceEEEEeCCCCCcchhhcCHHHHHHHHHH
Confidence 3568999999999999998888887742110 1234455 589999999999999999999
Q ss_pred HHc
Q 041833 410 FLS 412 (427)
Q Consensus 410 fL~ 412 (427)
||.
T Consensus 349 FL~ 351 (351)
T TIGR01392 349 FLR 351 (351)
T ss_pred HhC
Confidence 984
No 51
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=98.93 E-value=2.8e-08 Score=102.81 Aligned_cols=187 Identities=14% Similarity=0.060 Sum_probs=105.4
Q ss_pred ceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhc
Q 041833 164 ANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQAT 243 (427)
Q Consensus 164 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~ 243 (427)
+++|-+|.| |+|.|.... .. .+. ..+...+.+++...|.....++.|+|+|+||.+++.+|..-
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~~-~d~----~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~------- 286 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---LT-QDS----SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLE------- 286 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---cc-ccH----HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhC-------
Confidence 789999999 999985421 11 011 12223445566666666678999999999998888777531
Q ss_pred CCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhc-CCcccc--
Q 041833 244 GEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNEL-GNIDQY-- 320 (427)
Q Consensus 244 ~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~-g~in~Y-- 320 (427)
+-.++++++.+|.++.......... .+.......+...... ...........+.... ......
T Consensus 287 ---p~ri~a~V~~~~~~~~~~~~~~~~~------~~p~~~~~~la~~lg~-----~~~~~~~l~~~l~~~sl~~~~~l~~ 352 (414)
T PRK05077 287 ---PPRLKAVACLGPVVHTLLTDPKRQQ------QVPEMYLDVLASRLGM-----HDASDEALRVELNRYSLKVQGLLGR 352 (414)
T ss_pred ---CcCceEEEEECCccchhhcchhhhh------hchHHHHHHHHHHhCC-----CCCChHHHHHHhhhccchhhhhhcc
Confidence 3358898888887753221110000 0000001111110000 0001111111111100 000000
Q ss_pred cccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCc
Q 041833 321 NRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRP 400 (427)
Q Consensus 321 di~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqP 400 (427)
.+. .+.|+++|+.|.++|....+.+.+.+. +.+++.++++ ..+++|
T Consensus 353 ~i~-------~PvLiI~G~~D~ivP~~~a~~l~~~~~------------------------~~~l~~i~~~---~~~e~~ 398 (414)
T PRK05077 353 RCP-------TPMLSGYWKNDPFSPEEDSRLIASSSA------------------------DGKLLEIPFK---PVYRNF 398 (414)
T ss_pred CCC-------CcEEEEecCCCCCCCHHHHHHHHHhCC------------------------CCeEEEccCC---CccCCH
Confidence 111 347899999999999999887765442 2356888887 344699
Q ss_pred HHHHHHHHHHHcCC
Q 041833 401 KPALTLIKSFLSGR 414 (427)
Q Consensus 401 e~~~~mi~~fL~g~ 414 (427)
+.++..+.+||..+
T Consensus 399 ~~~~~~i~~wL~~~ 412 (414)
T PRK05077 399 DKALQEISDWLEDR 412 (414)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999654
No 52
>PLN02511 hydrolase
Probab=98.91 E-value=1.7e-08 Score=103.66 Aligned_cols=114 Identities=18% Similarity=0.202 Sum_probs=70.5
Q ss_pred eEEecCCCCeeEEEEEEee--ccCCCCCCceEeecCCCCchhHhh--hhhhhcCCeEEcCCCCceeeCCCCccccceEEE
Q 041833 93 YVTVNEESGRALFYWFVEA--VEDPDSKPLVLWLNGGPGCSSIAY--GEAEEIGPFHIKPDGKTLYLNPYSWNQVANILF 168 (427)
Q Consensus 93 y~~v~~~~~~~lFy~f~es--~~~p~~~Pl~lWlnGGPG~Ss~~~--g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlf 168 (427)
++...+ |..+.+..+.. ...+.++|+||.|||..|+|...| .+... ...+-.++|-
T Consensus 75 ~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~~~------------------~~~~g~~vv~ 134 (388)
T PLN02511 75 CLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHMLLR------------------ARSKGWRVVV 134 (388)
T ss_pred EEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHHHH------------------HHHCCCEEEE
Confidence 555532 34565533321 223567899999999998874311 11111 0124578999
Q ss_pred EeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHH
Q 041833 169 LDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 169 iDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
+|.| |.|.|....+..+ ....++|+.++++..-.++| ..+++++|+|+||..+-.++.
T Consensus 135 ~d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~ 192 (388)
T PLN02511 135 FNSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLG 192 (388)
T ss_pred EecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHH
Confidence 9997 9999975433222 23456777777766555443 568999999999976555443
No 53
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=98.90 E-value=1.9e-07 Score=92.53 Aligned_cols=263 Identities=17% Similarity=0.109 Sum_probs=148.9
Q ss_pred EEEeeEEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEE
Q 041833 89 HYSGYVTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILF 168 (427)
Q Consensus 89 ~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlf 168 (427)
...|+.... .+..++|+.++...++. -+|+++||.=..+... -.+.+ .+.. .=+.++-
T Consensus 9 ~~~~~~~~~--d~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~ry-~~la~-----------~l~~------~G~~V~~ 66 (298)
T COG2267 9 RTEGYFTGA--DGTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGRY-EELAD-----------DLAA------RGFDVYA 66 (298)
T ss_pred cccceeecC--CCceEEEEeecCCCCCC--cEEEEecCchHHHHHH-HHHHH-----------HHHh------CCCEEEE
Confidence 334555432 35789999888765444 8999999986655553 33222 1111 2378899
Q ss_pred EeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcce
Q 041833 169 LDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAI 248 (427)
Q Consensus 169 iDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~i 248 (427)
+|+| |+|.|.. ...... .+-.+..+|+.++++..... ....|+||+|||+||.++...+. +. .-
T Consensus 67 ~D~R-GhG~S~r-~~rg~~-~~f~~~~~dl~~~~~~~~~~---~~~~p~~l~gHSmGg~Ia~~~~~----~~------~~ 130 (298)
T COG2267 67 LDLR-GHGRSPR-GQRGHV-DSFADYVDDLDAFVETIAEP---DPGLPVFLLGHSMGGLIALLYLA----RY------PP 130 (298)
T ss_pred ecCC-CCCCCCC-CCcCCc-hhHHHHHHHHHHHHHHHhcc---CCCCCeEEEEeCcHHHHHHHHHH----hC------Cc
Confidence 9997 9999973 122232 14566667777766655433 34669999999999955554444 32 36
Q ss_pred ecceeeeccCccCccc--ccchhhh-HhhhcccC------CH----------HH-HHHHHHhhhccCCCCCchhHHHHHH
Q 041833 249 NLKGYMVGNALTDDYH--DYLGLFQ-FWWSAGLI------SD----------DT-YKQLNLLCDYESFVHPSSSCDKVLE 308 (427)
Q Consensus 249 nLkGi~ign~~id~~~--~~~~~~~-f~~~~glI------~~----------~~-~~~l~~~C~~~~~~~~~~~C~~~~~ 308 (427)
+++|+++-+|++.... ....... .+...+.+ +. .. .....+.+...........-....+
T Consensus 131 ~i~~~vLssP~~~l~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~ 210 (298)
T COG2267 131 RIDGLVLSSPALGLGGAILRLILARLALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVD 210 (298)
T ss_pred cccEEEEECccccCChhHHHHHHHHHhcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHH
Confidence 7999999999988762 1110000 00001100 11 00 0000111110000000000001111
Q ss_pred HHHhhcCCcccccccccccccccceeEEeCCCCcccC-hhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEE
Q 041833 309 VADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIP-VTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVT 387 (427)
Q Consensus 309 ~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p-~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~ 387 (427)
............ +..-..++.||.+|..|.++. ..+..++++.++-+.+ +++.
T Consensus 211 ~~~~a~~~~~~~----~~~~~~~PvLll~g~~D~vv~~~~~~~~~~~~~~~~~~----------------------~~~~ 264 (298)
T COG2267 211 LALLAGRVPALR----DAPAIALPVLLLQGGDDRVVDNVEGLARFFERAGSPDK----------------------ELKV 264 (298)
T ss_pred HHHHhhcccchh----ccccccCCEEEEecCCCccccCcHHHHHHHHhcCCCCc----------------------eEEe
Confidence 111111100000 001113558899999999999 6889999988875543 7899
Q ss_pred ECCCCCcCCcCCc---HHHHHHHHHHHcCCC
Q 041833 388 VRGAGHEVPLHRP---KPALTLIKSFLSGRS 415 (427)
Q Consensus 388 V~gAGHmvP~dqP---e~~~~mi~~fL~g~~ 415 (427)
++||-|.+..+.+ +++++.|..|+....
T Consensus 265 ~~g~~He~~~E~~~~r~~~~~~~~~~l~~~~ 295 (298)
T COG2267 265 IPGAYHELLNEPDRAREEVLKDILAWLAEAL 295 (298)
T ss_pred cCCcchhhhcCcchHHHHHHHHHHHHHHhhc
Confidence 9999999998865 578888888887543
No 54
>PRK10566 esterase; Provisional
Probab=98.83 E-value=1.3e-07 Score=89.98 Aligned_cols=60 Identities=25% Similarity=0.278 Sum_probs=46.1
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFL 411 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL 411 (427)
+.|+++|+.|.++|+..++++.+.|+-.+. ..++++.++.++||... | ..++.+.+||
T Consensus 188 P~Lii~G~~D~~v~~~~~~~l~~~l~~~g~------------------~~~~~~~~~~~~~H~~~---~-~~~~~~~~fl 245 (249)
T PRK10566 188 PLLLWHGLADDVVPAAESLRLQQALRERGL------------------DKNLTCLWEPGVRHRIT---P-EALDAGVAFF 245 (249)
T ss_pred CEEEEEcCCCCcCCHHHHHHHHHHHHhcCC------------------CcceEEEecCCCCCccC---H-HHHHHHHHHH
Confidence 478999999999999999999888854322 11368899999999974 4 4567777788
Q ss_pred cC
Q 041833 412 SG 413 (427)
Q Consensus 412 ~g 413 (427)
+.
T Consensus 246 ~~ 247 (249)
T PRK10566 246 RQ 247 (249)
T ss_pred Hh
Confidence 64
No 55
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=98.82 E-value=2.5e-07 Score=90.27 Aligned_cols=80 Identities=15% Similarity=0.105 Sum_probs=56.1
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
-.+++-+|.| |+|.|.... . +.++..+|+.++++.+.+..|.+ .+++++|+|+||..+-.+|. .
T Consensus 57 G~~v~~~Dl~-G~G~S~~~~----~--~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~----~--- 120 (274)
T TIGR03100 57 GFPVLRFDYR-GMGDSEGEN----L--GFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAP----A--- 120 (274)
T ss_pred CCEEEEeCCC-CCCCCCCCC----C--CHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhh----h---
Confidence 3789999998 999986431 1 44566778888777655544433 46999999999965444432 1
Q ss_pred cCCcceecceeeeccCccCc
Q 041833 243 TGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~ 262 (427)
.-.++|+++.+|++..
T Consensus 121 ----~~~v~~lil~~p~~~~ 136 (274)
T TIGR03100 121 ----DLRVAGLVLLNPWVRT 136 (274)
T ss_pred ----CCCccEEEEECCccCC
Confidence 1359999999998654
No 56
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=98.78 E-value=1.3e-08 Score=94.13 Aligned_cols=54 Identities=22% Similarity=0.297 Sum_probs=46.1
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIK 408 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~ 408 (427)
++.|+++|+.|.++|....+...+.++ +.+++.++++||+...+.|+...++|.
T Consensus 176 ~p~l~i~~~~D~~~p~~~~~~~~~~~~------------------------~~~~~~~~~~GH~~~~~~~~~~~~~i~ 229 (230)
T PF00561_consen 176 VPTLIIWGEDDPLVPPESSEQLAKLIP------------------------NSQLVLIEGSGHFAFLEGPDEFNEIII 229 (230)
T ss_dssp SEEEEEEETTCSSSHHHHHHHHHHHST------------------------TEEEEEETTCCSTHHHHSHHHHHHHHH
T ss_pred CCeEEEEeCCCCCCCHHHHHHHHHhcC------------------------CCEEEECCCCChHHHhcCHHhhhhhhc
Confidence 346899999999999998888666553 347899999999999999999998875
No 57
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=98.71 E-value=1.6e-06 Score=79.29 Aligned_cols=104 Identities=20% Similarity=0.199 Sum_probs=66.5
Q ss_pred CCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHH
Q 041833 118 KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAED 197 (427)
Q Consensus 118 ~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d 197 (427)
.|.++++||+|+++... ....+..+ .... + ++++.+|+| |+|.|. .. .+ .....+++
T Consensus 21 ~~~i~~~hg~~~~~~~~-~~~~~~~~-----------~~~~---~-~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~ 77 (282)
T COG0596 21 GPPLVLLHGFPGSSSVW-RPVFKVLP-----------ALAA---R-YRVIAPDLR-GHGRSD-PA--GY---SLSAYADD 77 (282)
T ss_pred CCeEEEeCCCCCchhhh-HHHHHHhh-----------cccc---c-eEEEEeccc-CCCCCC-cc--cc---cHHHHHHH
Confidence 67999999999998887 33111111 1110 1 899999999 999997 11 11 22333666
Q ss_pred HHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 198 SLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 198 ~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
+..+++. +...+++++|+||||..+-.++.+..+ .++++++.++...
T Consensus 78 ~~~~~~~-------~~~~~~~l~G~S~Gg~~~~~~~~~~p~----------~~~~~v~~~~~~~ 124 (282)
T COG0596 78 LAALLDA-------LGLEKVVLVGHSMGGAVALALALRHPD----------RVRGLVLIGPAPP 124 (282)
T ss_pred HHHHHHH-------hCCCceEEEEecccHHHHHHHHHhcch----------hhheeeEecCCCC
Confidence 6665552 444459999999998666666654332 4677777776544
No 58
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=98.69 E-value=1.1e-06 Score=85.61 Aligned_cols=252 Identities=15% Similarity=0.128 Sum_probs=140.4
Q ss_pred CCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccC
Q 041833 99 ESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS 178 (427)
Q Consensus 99 ~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfS 178 (427)
..|..||.-.......++-+-+|+.+||.-+-+|.. |+++-. .+.. .-+-+..+|++ |+|+|
T Consensus 35 ~rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~---~~~~a~--------~l~~------~g~~v~a~D~~-GhG~S 96 (313)
T KOG1455|consen 35 PRGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWR---YQSTAK--------RLAK------SGFAVYAIDYE-GHGRS 96 (313)
T ss_pred CCCCEeEEEecccCCCCCCceEEEEEcCCcccchhh---HHHHHH--------HHHh------CCCeEEEeecc-CCCcC
Confidence 346789975555444446667999999975555332 222111 1111 12456779996 99999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
.+.. .|. .+.+..++|+..|+..+.. ..++++.|.|++|||+||..+-.++.+ . +--..|+++..|
T Consensus 97 dGl~--~yi-~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k----~------p~~w~G~ilvaP 162 (313)
T KOG1455|consen 97 DGLH--AYV-PSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK----D------PNFWDGAILVAP 162 (313)
T ss_pred CCCc--ccC-CcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh----C------Ccccccceeeec
Confidence 8653 354 3788899999998887644 457889999999999999554444442 2 445788888888
Q ss_pred ccCcccccch------hhhHhh----hcccCCHH-----HH-H-HHHHhhhccCC-CCCchhHHHHHHHHH---hhcCCc
Q 041833 259 LTDDYHDYLG------LFQFWW----SAGLISDD-----TY-K-QLNLLCDYESF-VHPSSSCDKVLEVAD---NELGNI 317 (427)
Q Consensus 259 ~id~~~~~~~------~~~f~~----~~glI~~~-----~~-~-~l~~~C~~~~~-~~~~~~C~~~~~~~~---~~~g~i 317 (427)
+.--...... ....+. ...+++.+ .+ + ..++.+..+.. ......-..+.+.++ ....+.
T Consensus 163 mc~i~~~~kp~p~v~~~l~~l~~liP~wk~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~~le~~l 242 (313)
T KOG1455|consen 163 MCKISEDTKPHPPVISILTLLSKLIPTWKIVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTADLEKNL 242 (313)
T ss_pred ccccCCccCCCcHHHHHHHHHHHhCCceeecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHHHHHHhc
Confidence 7532221111 011110 00111111 00 0 01111111100 011111111222211 111111
Q ss_pred ccccccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc
Q 041833 318 DQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL 397 (427)
Q Consensus 318 n~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~ 397 (427)
+ .+. ++.||.+|+.|.+|-..++++..+.-.-..+ |+-..+|+=|-...
T Consensus 243 ~--~vt-------vPflilHG~dD~VTDp~~Sk~Lye~A~S~DK----------------------TlKlYpGm~H~Ll~ 291 (313)
T KOG1455|consen 243 N--EVT-------VPFLILHGTDDKVTDPKVSKELYEKASSSDK----------------------TLKLYPGMWHSLLS 291 (313)
T ss_pred c--ccc-------ccEEEEecCCCcccCcHHHHHHHHhccCCCC----------------------ceeccccHHHHhhc
Confidence 1 111 3368999999999999999999886654444 67888898898765
Q ss_pred -CCc---HHHHHHHHHHHcC
Q 041833 398 -HRP---KPALTLIKSFLSG 413 (427)
Q Consensus 398 -dqP---e~~~~mi~~fL~g 413 (427)
+-+ +.++.=|..||+.
T Consensus 292 gE~~en~e~Vf~DI~~Wl~~ 311 (313)
T KOG1455|consen 292 GEPDENVEIVFGDIISWLDE 311 (313)
T ss_pred CCCchhHHHHHHHHHHHHHh
Confidence 333 4445555667754
No 59
>PRK10985 putative hydrolase; Provisional
Probab=98.65 E-value=3.9e-07 Score=91.03 Aligned_cols=129 Identities=19% Similarity=0.187 Sum_probs=67.4
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhh-hhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCc
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGE-AEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSY 179 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~-~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy 179 (427)
|..+.+++.+....+..+|+||.+||.+|++...+.. +.+ .+.. +-.+++-+|.+ |+|-|-
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~~-----------~l~~------~G~~v~~~d~r-G~g~~~ 102 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLLE-----------AAQK------RGWLGVVMHFR-GCSGEP 102 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHHH-----------HHHH------CCCEEEEEeCC-CCCCCc
Confidence 3445444343333345689999999999875432110 111 0111 23578888986 988664
Q ss_pred CCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 180 SNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 180 ~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
......+. .. ..+|+..+++ +++. ++...+++++|+|+||..+-.++.+ .. ....++++++.++-
T Consensus 103 ~~~~~~~~-~~---~~~D~~~~i~-~l~~--~~~~~~~~~vG~S~GG~i~~~~~~~---~~-----~~~~~~~~v~i~~p 167 (324)
T PRK10985 103 NRLHRIYH-SG---ETEDARFFLR-WLQR--EFGHVPTAAVGYSLGGNMLACLLAK---EG-----DDLPLDAAVIVSAP 167 (324)
T ss_pred cCCcceEC-CC---chHHHHHHHH-HHHH--hCCCCCEEEEEecchHHHHHHHHHh---hC-----CCCCccEEEEEcCC
Confidence 33222221 11 2355554443 3332 2345689999999999654433332 11 12236665555554
Q ss_pred cCc
Q 041833 260 TDD 262 (427)
Q Consensus 260 id~ 262 (427)
.+.
T Consensus 168 ~~~ 170 (324)
T PRK10985 168 LML 170 (324)
T ss_pred CCH
Confidence 443
No 60
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=98.61 E-value=3.5e-06 Score=86.61 Aligned_cols=64 Identities=16% Similarity=0.115 Sum_probs=52.5
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECC-CCCcCCcCCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRG-AGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~g-AGHmvP~dqPe~~~~mi~~ 409 (427)
.+.|++.|+.|.++|....++..+.++-.+ .+.++++|++ +||+++.++|++..+.|.+
T Consensus 324 ~PtLvI~G~~D~l~p~~~~~~la~~lp~~~--------------------~~a~l~~I~s~~GH~~~le~p~~~~~~I~~ 383 (389)
T PRK06765 324 ANVLMIPCKQDLLQPPRYNYKMVDILQKQG--------------------KYAEVYEIESINGHMAGVFDIHLFEKKIYE 383 (389)
T ss_pred CCEEEEEeCCCCCCCHHHHHHHHHHhhhcC--------------------CCeEEEEECCCCCcchhhcCHHHHHHHHHH
Confidence 356899999999999988888777664211 1357899986 9999999999999999999
Q ss_pred HHcCC
Q 041833 410 FLSGR 414 (427)
Q Consensus 410 fL~g~ 414 (427)
||..+
T Consensus 384 FL~~~ 388 (389)
T PRK06765 384 FLNRK 388 (389)
T ss_pred HHccc
Confidence 99763
No 61
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.59 E-value=3.4e-07 Score=87.87 Aligned_cols=111 Identities=20% Similarity=0.305 Sum_probs=77.4
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
..-|+++.+||| |.|.+.+..|.. .+..+ -...++-+|. +|+|-|...+..++ +.+..+
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~-----------el~s~-----~~~r~~a~Dl-RgHGeTk~~~e~dl---S~eT~~ 130 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFAS-----------ELKSK-----IRCRCLALDL-RGHGETKVENEDDL---SLETMS 130 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHH-----------HHHhh-----cceeEEEeec-cccCccccCChhhc---CHHHHH
Confidence 456999999998 888887555532 11111 1234588997 59999998877665 678889
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
.|+...++++|..- .-+++|+|||+||.++.+.|.. ..--+|.|+.+.+=+-
T Consensus 131 KD~~~~i~~~fge~----~~~iilVGHSmGGaIav~~a~~---------k~lpsl~Gl~viDVVE 182 (343)
T KOG2564|consen 131 KDFGAVIKELFGEL----PPQIILVGHSMGGAIAVHTAAS---------KTLPSLAGLVVIDVVE 182 (343)
T ss_pred HHHHHHHHHHhccC----CCceEEEeccccchhhhhhhhh---------hhchhhhceEEEEEec
Confidence 99999999887432 2369999999999666554431 1233488888775443
No 62
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.53 E-value=1.2e-06 Score=81.78 Aligned_cols=190 Identities=15% Similarity=0.153 Sum_probs=106.2
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhh
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 241 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~ 241 (427)
+=+.|+.+|.+-+.||+..-...... ..-....+|+.++++...++ +....++++|+|+||||+.+..++. +.
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~-~~~~~~~~D~~~~i~~l~~~-~~iD~~ri~i~G~S~GG~~a~~~~~----~~- 85 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRG-DWGQADVDDVVAAIEYLIKQ-YYIDPDRIGIMGHSYGGYLALLAAT----QH- 85 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTT-GTTHHHHHHHHHHHHHHHHT-TSEEEEEEEEEEETHHHHHHHHHHH----HT-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhc-cccccchhhHHHHHHHHhcc-ccccceeEEEEcccccccccchhhc----cc-
Confidence 45789999987555555431111111 13345678888877655444 3455678999999999965555444 21
Q ss_pred hcCCcceecceeeeccCccCcccccchh--hhH--hhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCc
Q 041833 242 ATGEKAINLKGYMVGNALTDDYHDYLGL--FQF--WWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNI 317 (427)
Q Consensus 242 ~~~~~~inLkGi~ign~~id~~~~~~~~--~~f--~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~i 317 (427)
+-.++.++.++|.+|........ +.. ....+.. ............+.... .+
T Consensus 86 -----~~~f~a~v~~~g~~d~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~s~~~~~~-~~ 141 (213)
T PF00326_consen 86 -----PDRFKAAVAGAGVSDLFSYYGTTDIYTKAEYLEYGDP------------------WDNPEFYRELSPISPAD-NV 141 (213)
T ss_dssp -----CCGSSEEEEESE-SSTTCSBHHTCCHHHGHHHHHSST------------------TTSHHHHHHHHHGGGGG-GC
T ss_pred -----ceeeeeeeccceecchhcccccccccccccccccCcc------------------chhhhhhhhhccccccc-cc
Confidence 34478999999998876543221 100 0011110 00111111111111100 00
Q ss_pred ccccccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc
Q 041833 318 DQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL 397 (427)
Q Consensus 318 n~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~ 397 (427)
. + ..+.||++|+.|.+||+..++.+.+.|.-.++ ..++++++++||-...
T Consensus 142 ~---~-------~~P~li~hG~~D~~Vp~~~s~~~~~~L~~~g~--------------------~~~~~~~p~~gH~~~~ 191 (213)
T PF00326_consen 142 Q---I-------KPPVLIIHGENDPRVPPSQSLRLYNALRKAGK--------------------PVELLIFPGEGHGFGN 191 (213)
T ss_dssp G---G-------GSEEEEEEETTBSSSTTHHHHHHHHHHHHTTS--------------------SEEEEEETT-SSSTTS
T ss_pred c---C-------CCCEEEEccCCCCccCHHHHHHHHHHHHhcCC--------------------CEEEEEcCcCCCCCCC
Confidence 0 1 23478999999999999999999998863333 3688999999995553
Q ss_pred CC-cHHHHHHHHHHHc
Q 041833 398 HR-PKPALTLIKSFLS 412 (427)
Q Consensus 398 dq-Pe~~~~mi~~fL~ 412 (427)
.+ .....+.+.+|++
T Consensus 192 ~~~~~~~~~~~~~f~~ 207 (213)
T PF00326_consen 192 PENRRDWYERILDFFD 207 (213)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHH
Confidence 22 3345555556654
No 63
>PRK11071 esterase YqiA; Provisional
Probab=98.40 E-value=5.6e-06 Score=76.58 Aligned_cols=186 Identities=15% Similarity=0.071 Sum_probs=104.1
Q ss_pred CceEeecCCCCchhHhhh-hhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHH
Q 041833 119 PLVLWLNGGPGCSSIAYG-EAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAED 197 (427)
Q Consensus 119 Pl~lWlnGGPG~Ss~~~g-~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d 197 (427)
|.||+|||-+|++..+.. .+.+. +..+- ...+++.+|.| |.| ++.+++
T Consensus 2 p~illlHGf~ss~~~~~~~~~~~~-----------l~~~~----~~~~v~~~dl~-g~~---------------~~~~~~ 50 (190)
T PRK11071 2 STLLYLHGFNSSPRSAKATLLKNW-----------LAQHH----PDIEMIVPQLP-PYP---------------ADAAEL 50 (190)
T ss_pred CeEEEECCCCCCcchHHHHHHHHH-----------HHHhC----CCCeEEeCCCC-CCH---------------HHHHHH
Confidence 679999999887776511 11110 00000 12467888988 432 234444
Q ss_pred HHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcc
Q 041833 198 SLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAG 277 (427)
Q Consensus 198 ~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~g 277 (427)
+.++++ . +..++++|+|+|+||.++-.+|.+. + .+ +++.||.+++..... .+.-.
T Consensus 51 l~~l~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~----------~--~~-~vl~~~~~~~~~~~~---~~~~~-- 105 (190)
T PRK11071 51 LESLVL----E---HGGDPLGLVGSSLGGYYATWLSQCF----------M--LP-AVVVNPAVRPFELLT---DYLGE-- 105 (190)
T ss_pred HHHHHH----H---cCCCCeEEEEECHHHHHHHHHHHHc----------C--CC-EEEECCCCCHHHHHH---HhcCC--
Confidence 444443 2 4456899999999998877777642 2 12 466788777432111 11000
Q ss_pred cCCHHHHHHHHHhhhcc-CCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHHHHhc
Q 041833 278 LISDDTYKQLNLLCDYE-SFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDAL 356 (427)
Q Consensus 278 lI~~~~~~~l~~~C~~~-~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L 356 (427)
. ...... .. ... ...++.... .+.+.+..| .+++|++|+.|-++|+..+.+..+..
T Consensus 106 -~---------~~~~~~~~~-~~~---~~~~~d~~~----~~~~~i~~~-----~~v~iihg~~De~V~~~~a~~~~~~~ 162 (190)
T PRK11071 106 -N---------ENPYTGQQY-VLE---SRHIYDLKV----MQIDPLESP-----DLIWLLQQTGDEVLDYRQAVAYYAAC 162 (190)
T ss_pred -c---------ccccCCCcE-EEc---HHHHHHHHh----cCCccCCCh-----hhEEEEEeCCCCcCCHHHHHHHHHhc
Confidence 0 000000 00 000 111111111 122222211 24579999999999999998887732
Q ss_pred CCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 357 NLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 357 ~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
..+.++|++|.-.. .+..++.+..|+.
T Consensus 163 ---------------------------~~~~~~ggdH~f~~--~~~~~~~i~~fl~ 189 (190)
T PRK11071 163 ---------------------------RQTVEEGGNHAFVG--FERYFNQIVDFLG 189 (190)
T ss_pred ---------------------------ceEEECCCCcchhh--HHHhHHHHHHHhc
Confidence 34678999999833 3899999999974
No 64
>PLN02872 triacylglycerol lipase
Probab=98.39 E-value=1.3e-05 Score=82.41 Aligned_cols=60 Identities=15% Similarity=0.238 Sum_probs=49.1
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCc---CCcCCcHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHE---VPLHRPKPALTLI 407 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHm---vP~dqPe~~~~mi 407 (427)
++.+|+.|+.|.+++....+++.+.|.-. .++..++++||+ ...+.|+.+++.|
T Consensus 326 ~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~-----------------------~~l~~l~~~gH~dfi~~~eape~V~~~I 382 (395)
T PLN02872 326 LPLWMGYGGTDGLADVTDVEHTLAELPSK-----------------------PELLYLENYGHIDFLLSTSAKEDVYNHM 382 (395)
T ss_pred ccEEEEEcCCCCCCCHHHHHHHHHHCCCc-----------------------cEEEEcCCCCCHHHHhCcchHHHHHHHH
Confidence 46679999999999999999999888521 145778999996 4558999999999
Q ss_pred HHHHcC
Q 041833 408 KSFLSG 413 (427)
Q Consensus 408 ~~fL~g 413 (427)
.+||..
T Consensus 383 l~fL~~ 388 (395)
T PLN02872 383 IQFFRS 388 (395)
T ss_pred HHHHHH
Confidence 999973
No 65
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=98.21 E-value=1.8e-05 Score=74.14 Aligned_cols=117 Identities=15% Similarity=0.072 Sum_probs=60.6
Q ss_pred CCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCcc---CCh
Q 041833 115 PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITT---NGD 191 (427)
Q Consensus 115 p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~---~~~ 191 (427)
....|+||+|||+++..+.. ....+ +. .+. + ..-+.||..|.| |.|.+...- .-+.. ...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~~-~~~~~---~~------~~a-~----~~g~~Vv~Pd~~-g~~~~~~~~-~~~~~~~~~~~ 72 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASAY-VIDWG---WK------AAA-D----RYGFVLVAPEQT-SYNSSNNCW-DWFFTHHRARG 72 (212)
T ss_pred CCCCCEEEEeCCCCCCHHHH-hhhcC---hH------HHH-H----hCCeEEEecCCc-CccccCCCC-CCCCccccCCC
Confidence 35689999999998766543 11000 00 000 0 123678888886 655332110 00000 001
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
.....++..++....+++ ....++++|+|+|+||..+-.+|..- +-.+.++++..+.
T Consensus 73 ~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~----------p~~~~~~~~~~g~ 129 (212)
T TIGR01840 73 TGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTY----------PDVFAGGASNAGL 129 (212)
T ss_pred CccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhC----------chhheEEEeecCC
Confidence 122344444444433443 24456899999999997655555431 2236666665554
No 66
>PRK11460 putative hydrolase; Provisional
Probab=98.18 E-value=3.6e-05 Score=73.36 Aligned_cols=60 Identities=22% Similarity=0.167 Sum_probs=43.7
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFL 411 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL 411 (427)
+.++.+|+.|.++|+..+++..+.|+-.+. +.++.+++++||.+..+.-+.+.+-|+++|
T Consensus 150 pvli~hG~~D~vvp~~~~~~~~~~L~~~g~--------------------~~~~~~~~~~gH~i~~~~~~~~~~~l~~~l 209 (232)
T PRK11460 150 TIHLIHGGEDPVIDVAHAVAAQEALISLGG--------------------DVTLDIVEDLGHAIDPRLMQFALDRLRYTV 209 (232)
T ss_pred cEEEEecCCCCccCHHHHHHHHHHHHHCCC--------------------CeEEEEECCCCCCCCHHHHHHHHHHHHHHc
Confidence 368999999999999999988887753221 357888999999997544444444444444
No 67
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.16 E-value=2.8e-06 Score=85.82 Aligned_cols=131 Identities=21% Similarity=0.303 Sum_probs=82.2
Q ss_pred EEEEEEeec--cCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCC
Q 041833 104 LFYWFVEAV--EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 181 (427)
Q Consensus 104 lFy~f~es~--~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~ 181 (427)
=.||++++. .+|++||+||++||| |.+.+.=|..+. ...+-+...+...||.+|-..-. |- .
T Consensus 106 ~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~-----~L~~i~~~l~~~SILvLDYsLt~--~~-~ 169 (374)
T PF10340_consen 106 QSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIE-----FLLNIYKLLPEVSILVLDYSLTS--SD-E 169 (374)
T ss_pred ceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHH-----HHHHHHHHcCCCeEEEEeccccc--cc-c
Confidence 469999963 368889999999999 777776676542 11122222223499999975332 00 0
Q ss_pred CCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 182 TSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 182 ~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
....|+ +.- .++.+..+...+ .....++.|+|+|-||+.+-.+.+++.+.+. ..--+.+++..||+.
T Consensus 170 ~~~~yP--tQL---~qlv~~Y~~Lv~---~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~-----~~~Pk~~iLISPWv~ 236 (374)
T PF10340_consen 170 HGHKYP--TQL---RQLVATYDYLVE---SEGNKNIILMGDSAGGNLALSFLQYLKKPNK-----LPYPKSAILISPWVN 236 (374)
T ss_pred CCCcCc--hHH---HHHHHHHHHHHh---ccCCCeEEEEecCccHHHHHHHHHHHhhcCC-----CCCCceeEEECCCcC
Confidence 112233 222 233333333322 2345689999999999998888887665432 234589999999999
Q ss_pred cc
Q 041833 262 DY 263 (427)
Q Consensus 262 ~~ 263 (427)
+.
T Consensus 237 l~ 238 (374)
T PF10340_consen 237 LV 238 (374)
T ss_pred Cc
Confidence 86
No 68
>PLN02442 S-formylglutathione hydrolase
Probab=98.13 E-value=4.6e-05 Score=74.89 Aligned_cols=56 Identities=20% Similarity=0.184 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+++...+.++++ .+...+++|+|+|+||..+-.+|.+ . +-.+++++..+|..++.
T Consensus 126 ~~~l~~~i~~~~~---~~~~~~~~i~G~S~GG~~a~~~a~~----~------p~~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 126 VKELPKLLSDNFD---QLDTSRASIFGHSMGGHGALTIYLK----N------PDKYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHH---hcCCCceEEEEEChhHHHHHHHHHh----C------chhEEEEEEECCccCcc
Confidence 3444444554443 3456679999999999655555543 2 33477888888887754
No 69
>PRK10115 protease 2; Provisional
Probab=98.11 E-value=4.1e-05 Score=84.24 Aligned_cols=229 Identities=16% Similarity=0.070 Sum_probs=120.9
Q ss_pred EEecCCCCeeEEEEEEeecc--CCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeC
Q 041833 94 VTVNEESGRALFYWFVEAVE--DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDS 171 (427)
Q Consensus 94 ~~v~~~~~~~lFy~f~es~~--~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDq 171 (427)
+.+....|..+-.|++-... .....|+||+.+||||.+... ++..+.. .|...-=++.+=.
T Consensus 419 v~~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~p-~f~~~~~----------------~l~~rG~~v~~~n 481 (686)
T PRK10115 419 LWITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASIDA-DFSFSRL----------------SLLDRGFVYAIVH 481 (686)
T ss_pred EEEECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCC-CccHHHH----------------HHHHCCcEEEEEE
Confidence 44444556777766654332 234569999999999998654 3322221 2333322233333
Q ss_pred CCCcc-cCcCCCCC-CCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCccee
Q 041833 172 PVGVG-FSYSNTSS-DITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAIN 249 (427)
Q Consensus 172 P~G~G-fSy~~~~~-~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~in 249 (427)
++|.| |-..=... ... .-...-+|+.+..+...+ ..--...++.|.|-|||| .|+..++.+. +-.
T Consensus 482 ~RGs~g~G~~w~~~g~~~--~k~~~~~D~~a~~~~Lv~-~g~~d~~rl~i~G~S~GG----~l~~~~~~~~------Pdl 548 (686)
T PRK10115 482 VRGGGELGQQWYEDGKFL--KKKNTFNDYLDACDALLK-LGYGSPSLCYGMGGSAGG----MLMGVAINQR------PEL 548 (686)
T ss_pred cCCCCccCHHHHHhhhhh--cCCCcHHHHHHHHHHHHH-cCCCChHHeEEEEECHHH----HHHHHHHhcC------hhh
Confidence 56643 32110000 011 112345666665553333 322345679999999999 4444444332 445
Q ss_pred cceeeeccCccCcccccc--h---hhhHhhhcccCC-HHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCccccccc
Q 041833 250 LKGYMVGNALTDDYHDYL--G---LFQFWWSAGLIS-DDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRD 323 (427)
Q Consensus 250 LkGi~ign~~id~~~~~~--~---~~~f~~~~glI~-~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~ 323 (427)
+++++...|++|....+. . ........|-.. ++.++.+.+ .+.--+.-++.
T Consensus 549 f~A~v~~vp~~D~~~~~~~~~~p~~~~~~~e~G~p~~~~~~~~l~~-----------------------~SP~~~v~~~~ 605 (686)
T PRK10115 549 FHGVIAQVPFVDVVTTMLDESIPLTTGEFEEWGNPQDPQYYEYMKS-----------------------YSPYDNVTAQA 605 (686)
T ss_pred eeEEEecCCchhHhhhcccCCCCCChhHHHHhCCCCCHHHHHHHHH-----------------------cCchhccCccC
Confidence 999999999999765321 1 111111112111 111212111 11111111121
Q ss_pred ccccccccc-eeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEE---CCCCCcCCcCC
Q 041833 324 LLTFLVLFD-FLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTV---RGAGHEVPLHR 399 (427)
Q Consensus 324 ~p~~lp~i~-~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V---~gAGHmvP~dq 399 (427)
++ .||.+|..|.+||+..+++|+.+|.-.+.. -..+.+ .++||.-...+
T Consensus 606 -------~P~lLi~~g~~D~RV~~~~~~k~~a~Lr~~~~~--------------------~~~vl~~~~~~~GHg~~~~r 658 (686)
T PRK10115 606 -------YPHLLVTTGLHDSQVQYWEPAKWVAKLRELKTD--------------------DHLLLLCTDMDSGHGGKSGR 658 (686)
T ss_pred -------CCceeEEecCCCCCcCchHHHHHHHHHHhcCCC--------------------CceEEEEecCCCCCCCCcCH
Confidence 23 357899999999999999999988533321 122444 89999966555
Q ss_pred cHH
Q 041833 400 PKP 402 (427)
Q Consensus 400 Pe~ 402 (427)
-+.
T Consensus 659 ~~~ 661 (686)
T PRK10115 659 FKS 661 (686)
T ss_pred HHH
Confidence 444
No 70
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=98.11 E-value=0.00011 Score=71.85 Aligned_cols=42 Identities=19% Similarity=0.176 Sum_probs=30.6
Q ss_pred CCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 212 FKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 212 ~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
...++++|+|+|+||..+-.+|.+. +-.+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~----------p~~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKN----------PDRFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhC----------cccceEEEEECCccCcc
Confidence 4556899999999996666665532 33467888888887753
No 71
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=98.08 E-value=4.9e-05 Score=84.26 Aligned_cols=230 Identities=20% Similarity=0.227 Sum_probs=136.4
Q ss_pred eEEEEEEeecc-CC-CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcccCc
Q 041833 103 ALFYWFVEAVE-DP-DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVGFSY 179 (427)
Q Consensus 103 ~lFy~f~es~~-~p-~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy 179 (427)
.+.+++....+ ++ +.-|++++..|||++-+.. +.| .+..|.+.+. .-+-++.|| ++|+|+.-
T Consensus 509 ~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v~-~~~-------------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G 573 (755)
T KOG2100|consen 509 TANAILILPPNFDPSKKYPLLVVVYGGPGSQSVT-SKF-------------SVDWNEVVVSSRGFAVLQVD-GRGSGGYG 573 (755)
T ss_pred EEEEEEecCCCCCCCCCCCEEEEecCCCCcceee-eeE-------------EecHHHHhhccCCeEEEEEc-CCCcCCcc
Confidence 45566555443 23 4569999999999832222 111 1222333222 236678888 57998754
Q ss_pred CCC----CCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeee
Q 041833 180 SNT----SSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMV 255 (427)
Q Consensus 180 ~~~----~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~i 255 (427)
..- ..++ ++ ...+|....++.+++.+ ..-..++.|+|.|||| +++..++...+ ..-+|.-+.
T Consensus 574 ~~~~~~~~~~l---G~-~ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGG----y~t~~~l~~~~-----~~~fkcgva 639 (755)
T KOG2100|consen 574 WDFRSALPRNL---GD-VEVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGG----YLTLKLLESDP-----GDVFKCGVA 639 (755)
T ss_pred hhHHHHhhhhc---CC-cchHHHHHHHHHHHhcc-cccHHHeEEeccChHH----HHHHHHhhhCc-----CceEEEEEE
Confidence 321 1111 22 23556666666666665 3334469999999999 77777776542 244666678
Q ss_pred ccCccCcccccchhhhHhhhcccCCHHH--HHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccce
Q 041833 256 GNALTDDYHDYLGLFQFWWSAGLISDDT--YKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDF 333 (427)
Q Consensus 256 gn~~id~~~~~~~~~~f~~~~glI~~~~--~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~ 333 (427)
.+|++|...-...+.+.. +|+..++. |+... ...|.. + +...+-
T Consensus 640 vaPVtd~~~yds~~tery--mg~p~~~~~~y~e~~-----------~~~~~~---------------~------~~~~~~ 685 (755)
T KOG2100|consen 640 VAPVTDWLYYDSTYTERY--MGLPSENDKGYEESS-----------VSSPAN---------------N------IKTPKL 685 (755)
T ss_pred ecceeeeeeecccccHhh--cCCCccccchhhhcc-----------ccchhh---------------h------hccCCE
Confidence 889988762111111111 34333222 11110 000000 0 111235
Q ss_pred eEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCc-HHHHHHHHHHHc
Q 041833 334 LYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRP-KPALTLIKSFLS 412 (427)
Q Consensus 334 Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqP-e~~~~mi~~fL~ 412 (427)
|+++|..|-.+.+..+..++++|+-.+.. +...++++..|-.-.-.+ ...+..+.+|+.
T Consensus 686 LliHGt~DdnVh~q~s~~~~~aL~~~gv~--------------------~~~~vypde~H~is~~~~~~~~~~~~~~~~~ 745 (755)
T KOG2100|consen 686 LLIHGTEDDNVHFQQSAILIKALQNAGVP--------------------FRLLVYPDENHGISYVEVISHLYEKLDRFLR 745 (755)
T ss_pred EEEEcCCcCCcCHHHHHHHHHHHHHCCCc--------------------eEEEEeCCCCcccccccchHHHHHHHHHHHH
Confidence 79999999999999999999999876652 466889999999876553 456777777876
Q ss_pred CCCC
Q 041833 413 GRSM 416 (427)
Q Consensus 413 g~~l 416 (427)
.-+
T Consensus 746 -~~~ 748 (755)
T KOG2100|consen 746 -DCF 748 (755)
T ss_pred -HHc
Confidence 443
No 72
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=98.08 E-value=1.6e-05 Score=68.63 Aligned_cols=144 Identities=22% Similarity=0.298 Sum_probs=91.5
Q ss_pred ceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHH
Q 041833 120 LVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDS 198 (427)
Q Consensus 120 l~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~ 198 (427)
+||++||+.|..... ..+.+ .+. +-++++.+|.| |.|.+.. ...++++
T Consensus 1 ~vv~~HG~~~~~~~~-~~~~~------------------~l~~~G~~v~~~~~~-~~~~~~~-----------~~~~~~~ 49 (145)
T PF12695_consen 1 VVVLLHGWGGSRRDY-QPLAE------------------ALAEQGYAVVAFDYP-GHGDSDG-----------ADAVERV 49 (145)
T ss_dssp EEEEECTTTTTTHHH-HHHHH------------------HHHHTTEEEEEESCT-TSTTSHH-----------SHHHHHH
T ss_pred CEEEECCCCCCHHHH-HHHHH------------------HHHHCCCEEEEEecC-CCCccch-----------hHHHHHH
Confidence 589999998766554 44433 111 23788999987 7776521 1233333
Q ss_pred HHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhccc
Q 041833 199 LKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGL 278 (427)
Q Consensus 199 ~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~gl 278 (427)
.+.+. +..+ ..++++|+|+|.||..+..++.+ ...++++++.+|+.+ .
T Consensus 50 ~~~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~-----------~~~v~~~v~~~~~~~--~-------------- 97 (145)
T PF12695_consen 50 LADIR---AGYP--DPDRIILIGHSMGGAIAANLAAR-----------NPRVKAVVLLSPYPD--S-------------- 97 (145)
T ss_dssp HHHHH---HHHC--TCCEEEEEEETHHHHHHHHHHHH-----------STTESEEEEESESSG--C--------------
T ss_pred HHHHH---hhcC--CCCcEEEEEEccCcHHHHHHhhh-----------ccceeEEEEecCccc--h--------------
Confidence 33332 2222 56789999999999766666652 134788888887310 0
Q ss_pred CCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHHHHhcCC
Q 041833 279 ISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNL 358 (427)
Q Consensus 279 I~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~ 358 (427)
+ .+. .-.++.+++.|+.|.+++....+++.+.++.
T Consensus 98 ---~---~~~---------------------------------------~~~~pv~~i~g~~D~~~~~~~~~~~~~~~~~ 132 (145)
T PF12695_consen 98 ---E---DLA---------------------------------------KIRIPVLFIHGENDPLVPPEQVRRLYEALPG 132 (145)
T ss_dssp ---H---HHT---------------------------------------TTTSEEEEEEETT-SSSHHHHHHHHHHHHCS
T ss_pred ---h---hhh---------------------------------------ccCCcEEEEEECCCCcCCHHHHHHHHHHcCC
Confidence 0 000 0012478999999999999999999898862
Q ss_pred CCCccceeeeeCCceeeeeeeecCeEEEEECCCCCc
Q 041833 359 PTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHE 394 (427)
Q Consensus 359 ~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHm 394 (427)
.-++.+|+|++|+
T Consensus 133 -----------------------~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 133 -----------------------PKELYIIPGAGHF 145 (145)
T ss_dssp -----------------------SEEEEEETTS-TT
T ss_pred -----------------------CcEEEEeCCCcCc
Confidence 1267999999996
No 73
>PRK13604 luxD acyl transferase; Provisional
Probab=98.08 E-value=0.0001 Score=73.05 Aligned_cols=224 Identities=13% Similarity=0.125 Sum_probs=116.0
Q ss_pred CCeeEEEEEEeec-cCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccC
Q 041833 100 SGRALFYWFVEAV-EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS 178 (427)
Q Consensus 100 ~~~~lFy~f~es~-~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfS 178 (427)
.|..|.=|+.+.. +++...|++|..|| .|+....+--+. .+=+.+-+++|-.|.-.|.|-|
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~~~~A-----------------~~La~~G~~vLrfD~rg~~GeS 79 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHFAGLA-----------------EYLSSNGFHVIRYDSLHHVGLS 79 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHHHHHH-----------------HHHHHCCCEEEEecCCCCCCCC
Confidence 4677887777764 34566788888885 344432111111 1122345899999975345988
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
.+.- .+.. ......|+..++ +|++.. ...+++|.|||+||..+...|. ..+++++++..|
T Consensus 80 ~G~~-~~~t---~s~g~~Dl~aai-d~lk~~---~~~~I~LiG~SmGgava~~~A~------------~~~v~~lI~~sp 139 (307)
T PRK13604 80 SGTI-DEFT---MSIGKNSLLTVV-DWLNTR---GINNLGLIAASLSARIAYEVIN------------EIDLSFLITAVG 139 (307)
T ss_pred CCcc-ccCc---ccccHHHHHHHH-HHHHhc---CCCceEEEEECHHHHHHHHHhc------------CCCCCEEEEcCC
Confidence 5432 1221 112245665533 344442 2357999999999965422222 224888999999
Q ss_pred ccCcccccchhhhHhhh-cccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccc----cccccce
Q 041833 259 LTDDYHDYLGLFQFWWS-AGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLT----FLVLFDF 333 (427)
Q Consensus 259 ~id~~~~~~~~~~f~~~-~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~----~lp~i~~ 333 (427)
..+..........+.+. .+... +....++... ... ...++..+.. .+.+....+. -+. .+.
T Consensus 140 ~~~l~d~l~~~~~~~~~~~p~~~------lp~~~d~~g~-~l~--~~~f~~~~~~----~~~~~~~s~i~~~~~l~-~Pv 205 (307)
T PRK13604 140 VVNLRDTLERALGYDYLSLPIDE------LPEDLDFEGH-NLG--SEVFVTDCFK----HGWDTLDSTINKMKGLD-IPF 205 (307)
T ss_pred cccHHHHHHHhhhcccccCcccc------cccccccccc-ccc--HHHHHHHHHh----cCccccccHHHHHhhcC-CCE
Confidence 87743211111111000 00000 0000000000 000 0111111110 0111000000 011 457
Q ss_pred eEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc
Q 041833 334 LYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL 397 (427)
Q Consensus 334 Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~ 397 (427)
|+++|+.|..||+.+++++.++++-. +-.+..++||.|....
T Consensus 206 LiIHG~~D~lVp~~~s~~l~e~~~s~----------------------~kkl~~i~Ga~H~l~~ 247 (307)
T PRK13604 206 IAFTANNDSWVKQSEVIDLLDSIRSE----------------------QCKLYSLIGSSHDLGE 247 (307)
T ss_pred EEEEcCCCCccCHHHHHHHHHHhccC----------------------CcEEEEeCCCccccCc
Confidence 89999999999999999999987532 2368999999999754
No 74
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.91 E-value=0.00045 Score=69.45 Aligned_cols=138 Identities=13% Similarity=0.174 Sum_probs=83.5
Q ss_pred CCeeEEEEEEeeccC-C-CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcc
Q 041833 100 SGRALFYWFVEAVED-P-DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVG 176 (427)
Q Consensus 100 ~~~~lFy~f~es~~~-p-~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~G 176 (427)
....++-+.|..... + ..+|+||++|||--|-+.. .. ....+-..+. +.++.+-|= ++
T Consensus 70 ~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--------~~-------~~y~~~~~~~a~~~~~vvvS----Vd 130 (336)
T KOG1515|consen 70 PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--------NS-------PAYDSFCTRLAAELNCVVVS----VD 130 (336)
T ss_pred CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--------CC-------chhHHHHHHHHHHcCeEEEe----cC
Confidence 346788888877653 3 6899999999996655431 00 0001111111 333333332 22
Q ss_pred cCcCCCCCCCccCChHHHHHHHHHHHHH-HHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeee
Q 041833 177 FSYSNTSSDITTNGDKRTAEDSLKFLLK-WLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMV 255 (427)
Q Consensus 177 fSy~~~~~~~~~~~~~~~A~d~~~fL~~-f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~i 255 (427)
|--. +...++. ..++.-+.+.-++++ |++..-.++ +++|+|.|-||.++-.+|.++.+.. ..++.|+|+++
T Consensus 131 YRLA-PEh~~Pa-~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~----~~~~ki~g~il 202 (336)
T KOG1515|consen 131 YRLA-PEHPFPA-AYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEK----LSKPKIKGQIL 202 (336)
T ss_pred cccC-CCCCCCc-cchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhcc----CCCcceEEEEE
Confidence 2221 2223332 445555555555555 777654443 4999999999999999998887643 23788999999
Q ss_pred ccCccCccc
Q 041833 256 GNALTDDYH 264 (427)
Q Consensus 256 gn~~id~~~ 264 (427)
.-|+.....
T Consensus 203 i~P~~~~~~ 211 (336)
T KOG1515|consen 203 IYPFFQGTD 211 (336)
T ss_pred EecccCCCC
Confidence 999876544
No 75
>PRK10162 acetyl esterase; Provisional
Probab=97.87 E-value=0.00028 Score=70.53 Aligned_cols=194 Identities=9% Similarity=-0.002 Sum_probs=97.8
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
.+.||-+|-+..-. ..++ ...+.+.+.+.++.+..+.+ ....++++|+|+|.||+.+..++....+..
T Consensus 112 g~~Vv~vdYrlape-------~~~p--~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~-- 179 (318)
T PRK10162 112 GCTVIGIDYTLSPE-------ARFP--QAIEEIVAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQ-- 179 (318)
T ss_pred CCEEEEecCCCCCC-------CCCC--CcHHHHHHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcC--
Confidence 36778888652111 1122 22223333444444333322 123468999999999998888887665432
Q ss_pred cCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccc-c
Q 041833 243 TGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQY-N 321 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Y-d 321 (427)
.....++++++..|+++... ..+...+.-....++.+..+.+.+....... ...++| .
T Consensus 180 --~~~~~~~~~vl~~p~~~~~~-~~s~~~~~~~~~~l~~~~~~~~~~~y~~~~~------------------~~~~p~~~ 238 (318)
T PRK10162 180 --IDCGKVAGVLLWYGLYGLRD-SVSRRLLGGVWDGLTQQDLQMYEEAYLSNDA------------------DRESPYYC 238 (318)
T ss_pred --CCccChhheEEECCccCCCC-ChhHHHhCCCccccCHHHHHHHHHHhCCCcc------------------ccCCcccC
Confidence 12356889999999887431 1111111100001233322222221100000 000010 0
Q ss_pred ccccc---cccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc-
Q 041833 322 RDLLT---FLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL- 397 (427)
Q Consensus 322 i~~p~---~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~- 397 (427)
..... -+| +.+|..|..|.+.. .++.+.+.|.-.+. ..++..++|..|--..
T Consensus 239 p~~~~l~~~lP--p~~i~~g~~D~L~d--e~~~~~~~L~~aGv--------------------~v~~~~~~g~~H~f~~~ 294 (318)
T PRK10162 239 LFNNDLTRDVP--PCFIAGAEFDPLLD--DSRLLYQTLAAHQQ--------------------PCEFKLYPGTLHAFLHY 294 (318)
T ss_pred cchhhhhcCCC--CeEEEecCCCcCcC--hHHHHHHHHHHcCC--------------------CEEEEEECCCceehhhc
Confidence 00000 011 35799999999864 56777777754333 3578889999995432
Q ss_pred ----CCcHHHHHHHHHHHcC
Q 041833 398 ----HRPKPALTLIKSFLSG 413 (427)
Q Consensus 398 ----dqPe~~~~mi~~fL~g 413 (427)
++-+.+++.+.+||..
T Consensus 295 ~~~~~~a~~~~~~~~~~l~~ 314 (318)
T PRK10162 295 SRMMDTADDALRDGAQFFTA 314 (318)
T ss_pred cCchHHHHHHHHHHHHHHHH
Confidence 2334556666667643
No 76
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=97.85 E-value=0.00047 Score=69.57 Aligned_cols=60 Identities=17% Similarity=0.173 Sum_probs=45.9
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCc---HHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRP---KPALTLI 407 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqP---e~~~~mi 407 (427)
.+.|++.|+.|.++|...++.+.+.+.-. ..+++++. +||+.+.+.+ +.+...|
T Consensus 287 ~Pvliv~G~~D~i~~~~~~~~~~~~~~~~----------------------~~~~~~~~-~gH~~~~~~~~~~~~v~~~i 343 (350)
T TIGR01836 287 MPILNIYAERDHLVPPDASKALNDLVSSE----------------------DYTELSFP-GGHIGIYVSGKAQKEVPPAI 343 (350)
T ss_pred CCeEEEecCCCCcCCHHHHHHHHHHcCCC----------------------CeEEEEcC-CCCEEEEECchhHhhhhHHH
Confidence 45689999999999999999888877532 12455554 8999988765 6777888
Q ss_pred HHHHcC
Q 041833 408 KSFLSG 413 (427)
Q Consensus 408 ~~fL~g 413 (427)
.+||..
T Consensus 344 ~~wl~~ 349 (350)
T TIGR01836 344 GKWLQA 349 (350)
T ss_pred HHHHHh
Confidence 888854
No 77
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.85 E-value=4.3e-05 Score=74.54 Aligned_cols=128 Identities=13% Similarity=0.065 Sum_probs=78.4
Q ss_pred eeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcccCcC
Q 041833 102 RALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 102 ~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~ 180 (427)
..+|.|+++.... ..+|+||.+||..+-.....-.+..... .+. .-++++-+|.| |+|.|..
T Consensus 10 g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~~~la~---------------~La~~Gy~Vl~~Dl~-G~G~S~g 72 (266)
T TIGR03101 10 GFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMVALQAR---------------AFAAGGFGVLQIDLY-GCGDSAG 72 (266)
T ss_pred CcEEEEEecCCCC-CCceEEEEECCCcccccchhHHHHHHHH---------------HHHHCCCEEEEECCC-CCCCCCC
Confidence 4688888866432 3368999999853311000001111000 111 34789999998 9999965
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
... + .+.+...+|+..+++ |++.. ...+++|+|+|+||..+..+|.+. +..++++++.+|.+
T Consensus 73 ~~~-~---~~~~~~~~Dv~~ai~-~L~~~---~~~~v~LvG~SmGG~vAl~~A~~~----------p~~v~~lVL~~P~~ 134 (266)
T TIGR03101 73 DFA-A---ARWDVWKEDVAAAYR-WLIEQ---GHPPVTLWGLRLGALLALDAANPL----------AAKCNRLVLWQPVV 134 (266)
T ss_pred ccc-c---CCHHHHHHHHHHHHH-HHHhc---CCCCEEEEEECHHHHHHHHHHHhC----------ccccceEEEecccc
Confidence 322 1 144556677666443 44432 346899999999998777666432 34578999999988
Q ss_pred Cccc
Q 041833 261 DDYH 264 (427)
Q Consensus 261 d~~~ 264 (427)
+...
T Consensus 135 ~g~~ 138 (266)
T TIGR03101 135 SGKQ 138 (266)
T ss_pred chHH
Confidence 7554
No 78
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.84 E-value=0.00058 Score=67.53 Aligned_cols=90 Identities=20% Similarity=0.129 Sum_probs=58.8
Q ss_pred eccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCC
Q 041833 111 AVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNG 190 (427)
Q Consensus 111 s~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~ 190 (427)
+..+..+.|-++-+||==|.--.+ .-+.-+ |... --+.+.-||. +-+|.|-....- +
T Consensus 45 ~~~~~~~~Pp~i~lHGl~GS~~Nw-~sv~k~-----------Ls~~-----l~~~v~~vd~-RnHG~Sp~~~~h-----~ 101 (315)
T KOG2382|consen 45 SSENLERAPPAIILHGLLGSKENW-RSVAKN-----------LSRK-----LGRDVYAVDV-RNHGSSPKITVH-----N 101 (315)
T ss_pred cccccCCCCceEEecccccCCCCH-HHHHHH-----------hccc-----ccCceEEEec-ccCCCCcccccc-----C
Confidence 334567889999999865544332 222110 0000 0127888997 599999765442 5
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCc
Q 041833 191 DKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGG 226 (427)
Q Consensus 191 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG 226 (427)
-+..|+|+..|+...-. .++..+.+|.|||+||
T Consensus 102 ~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 102 YEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG 134 (315)
T ss_pred HHHHHHHHHHHHHHccc---ccccCCceecccCcch
Confidence 67788998888875432 2456789999999999
No 79
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=97.81 E-value=6.1e-05 Score=70.75 Aligned_cols=129 Identities=19% Similarity=0.223 Sum_probs=76.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhH
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQF 272 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f 272 (427)
+.++.+.+++....+. ....++++|.|-|-||..+-.++. + .+..+.|++..+|.+-...+....
T Consensus 85 ~s~~~l~~li~~~~~~--~i~~~ri~l~GFSQGa~~al~~~l----~------~p~~~~gvv~lsG~~~~~~~~~~~--- 149 (216)
T PF02230_consen 85 ESAERLDELIDEEVAY--GIDPSRIFLGGFSQGAAMALYLAL----R------YPEPLAGVVALSGYLPPESELEDR--- 149 (216)
T ss_dssp HHHHHHHHHHHHHHHT--T--GGGEEEEEETHHHHHHHHHHH----C------TSSTSSEEEEES---TTGCCCHCC---
T ss_pred HHHHHHHHHHHHHHHc--CCChhheehhhhhhHHHHHHHHHH----H------cCcCcCEEEEeecccccccccccc---
Confidence 3444444555444333 255668999999999966655554 2 244688999988876433211000
Q ss_pred hhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHH
Q 041833 273 WWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYS 352 (427)
Q Consensus 273 ~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~ 352 (427)
. . -+...+.++.+|+.|.++|....+..
T Consensus 150 -------------------------------------~----~-----------~~~~~pi~~~hG~~D~vvp~~~~~~~ 177 (216)
T PF02230_consen 150 -------------------------------------P----E-----------ALAKTPILIIHGDEDPVVPFEWAEKT 177 (216)
T ss_dssp -------------------------------------H----C-----------CCCTS-EEEEEETT-SSSTHHHHHHH
T ss_pred -------------------------------------c----c-----------ccCCCcEEEEecCCCCcccHHHHHHH
Confidence 0 0 01124578999999999999988887
Q ss_pred HHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHc
Q 041833 353 IDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLS 412 (427)
Q Consensus 353 i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~ 412 (427)
.+.|.-.+. +++|.+++|.||-++ .+.+..+++||.
T Consensus 178 ~~~L~~~~~--------------------~v~~~~~~g~gH~i~----~~~~~~~~~~l~ 213 (216)
T PF02230_consen 178 AEFLKAAGA--------------------NVEFHEYPGGGHEIS----PEELRDLREFLE 213 (216)
T ss_dssp HHHHHCTT---------------------GEEEEEETT-SSS------HHHHHHHHHHHH
T ss_pred HHHHHhcCC--------------------CEEEEEcCCCCCCCC----HHHHHHHHHHHh
Confidence 777642221 578999999999985 455667777875
No 80
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.72 E-value=0.0025 Score=62.28 Aligned_cols=223 Identities=17% Similarity=0.164 Sum_probs=118.2
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccc-----eEEEEeC----
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVA-----NILFLDS---- 171 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~a-----nvlfiDq---- 171 (427)
+...-||++.-..-++.+||||.|||+-|..+.. + +-..|++.| -|+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag~-----~---------------~~sg~d~lAd~~gFlV~yPdg~~~~ 103 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAGQ-----L---------------HGTGWDALADREGFLVAYPDGYDRA 103 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHHh-----h---------------cccchhhhhcccCcEEECcCccccc
Confidence 4567788888777788889999999987655443 1 222333321 2333321
Q ss_pred --CCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCccee
Q 041833 172 --PVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAIN 249 (427)
Q Consensus 172 --P~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~in 249 (427)
+-+.|-++...+. . ...+.+..+.+.+.+...+| ......+||+|-|=||..+-.|+.. .+--
T Consensus 104 wn~~~~~~~~~p~~~--~--~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~----------~p~~ 168 (312)
T COG3509 104 WNANGCGNWFGPADR--R--RGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACE----------YPDI 168 (312)
T ss_pred cCCCcccccCCcccc--c--CCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhc----------Cccc
Confidence 3355555443211 1 22233444444444444444 3445689999999999655555542 1334
Q ss_pred cceeeeccCcc-Ccc-cccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCccccccccccc
Q 041833 250 LKGYMVGNALT-DDY-HDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTF 327 (427)
Q Consensus 250 LkGi~ign~~i-d~~-~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~ 327 (427)
+.++++..+.. +.. .....-.+.+..||..|. .+.|+--
T Consensus 169 faa~A~VAg~~~~~~a~~~~rp~~~m~~~G~~Dp-----------------------------------~~p~~gG---- 209 (312)
T COG3509 169 FAAIAPVAGLLALGVACTPPRPVSVMAFHGTADP-----------------------------------LNPYHGG---- 209 (312)
T ss_pred ccceeeeecccCCCcccCCCCchhHHHhcCCCCC-----------------------------------CCCCCCC----
Confidence 67777776665 222 111122233333443332 1122111
Q ss_pred ccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCcee-eeeeeec--CeEEEEECCCCCcCCcCCcH
Q 041833 328 LVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVG-GWTQEYS--GLTFVTVRGAGHEVPLHRPK 401 (427)
Q Consensus 328 lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~-Gy~k~y~--~Ltfv~V~gAGHmvP~dqPe 401 (427)
..- |-.|+.|..+|......+.+.++-=...+-..+..+...+ -|...-. .+.+.+|.+.||..|.-.+.
T Consensus 210 ---~~~-~g~g~~~~~v~~~~~~~~Waa~ng~~~~p~~~~~~~~~~~~~~~~~~~~~~V~~y~i~g~GH~wp~~~~~ 282 (312)
T COG3509 210 ---GVP-IGRGQRDGVVSAADLAARWAAVNGCQAGPDTAELPDVGDGTDYDTCDGNARVELYTIDGGGHTWPGGTQY 282 (312)
T ss_pred ---Ccc-cccccccccccHHHHHHHHHHhcCCCCCCcccccCCCcccceeeccCCCcceEEEEEeCCcccCcCCCCC
Confidence 111 6678999988888777666666532222212222211111 1111112 28899999999999964444
No 81
>COG1647 Esterase/lipase [General function prediction only]
Probab=97.72 E-value=0.00059 Score=63.94 Aligned_cols=221 Identities=17% Similarity=0.169 Sum_probs=122.6
Q ss_pred CceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHH
Q 041833 119 PLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDS 198 (427)
Q Consensus 119 Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~ 198 (427)
--+|.|||=-|.++=. -.+.. + .|...|+= +.=+-.|+|-.. .++.+.+-++.-+++
T Consensus 16 ~AVLllHGFTGt~~Dv-r~Lgr---~----------L~e~GyTv-----~aP~ypGHG~~~----e~fl~t~~~DW~~~v 72 (243)
T COG1647 16 RAVLLLHGFTGTPRDV-RMLGR---Y----------LNENGYTV-----YAPRYPGHGTLP----EDFLKTTPRDWWEDV 72 (243)
T ss_pred EEEEEEeccCCCcHHH-HHHHH---H----------HHHCCceE-----ecCCCCCCCCCH----HHHhcCCHHHHHHHH
Confidence 5688999988888743 22211 1 11112221 111223998654 222222444444444
Q ss_pred HHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccc---hhhhHhhh
Q 041833 199 LKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYL---GLFQFWWS 275 (427)
Q Consensus 199 ~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~---~~~~f~~~ 275 (427)
.+..+... +-.-..++|+|-|+||...--||. ..++|+|+...+-+....... .+..|+-+
T Consensus 73 ~d~Y~~L~----~~gy~eI~v~GlSmGGv~alkla~------------~~p~K~iv~m~a~~~~k~~~~iie~~l~y~~~ 136 (243)
T COG1647 73 EDGYRDLK----EAGYDEIAVVGLSMGGVFALKLAY------------HYPPKKIVPMCAPVNVKSWRIIIEGLLEYFRN 136 (243)
T ss_pred HHHHHHHH----HcCCCeEEEEeecchhHHHHHHHh------------hCCccceeeecCCcccccchhhhHHHHHHHHH
Confidence 33333222 123457999999999965555554 445899998777666543222 22233222
Q ss_pred c---ccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHH
Q 041833 276 A---GLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYS 352 (427)
Q Consensus 276 ~---glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~ 352 (427)
. --.+.++.+...+.-..... ....+...+++.+.. .++ .|+ ...+|.+|.+|-++|..+++..
T Consensus 137 ~kk~e~k~~e~~~~e~~~~~~~~~-~~~~~~~~~i~~~~~---~~~--~I~-------~pt~vvq~~~D~mv~~~sA~~I 203 (243)
T COG1647 137 AKKYEGKDQEQIDKEMKSYKDTPM-TTTAQLKKLIKDARR---SLD--KIY-------SPTLVVQGRQDEMVPAESANFI 203 (243)
T ss_pred hhhccCCCHHHHHHHHHHhhcchH-HHHHHHHHHHHHHHh---hhh--hcc-------cchhheecccCCCCCHHHHHHH
Confidence 2 23455554443332221110 011111222222211 111 122 2357999999999999999999
Q ss_pred HHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCC-cHHHHHHHHHHHcC
Q 041833 353 IDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHR-PKPALTLIKSFLSG 413 (427)
Q Consensus 353 i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dq-Pe~~~~mi~~fL~g 413 (427)
.+.+.-..+ .+.++.++||.+-.|. -+...+-+-+||++
T Consensus 204 y~~v~s~~K----------------------eL~~~e~SgHVIt~D~Erd~v~e~V~~FL~~ 243 (243)
T COG1647 204 YDHVESDDK----------------------ELKWLEGSGHVITLDKERDQVEEDVITFLEK 243 (243)
T ss_pred HHhccCCcc----------------------eeEEEccCCceeecchhHHHHHHHHHHHhhC
Confidence 998875544 5688999999999884 67788888888863
No 82
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=97.67 E-value=0.002 Score=68.71 Aligned_cols=85 Identities=9% Similarity=-0.016 Sum_probs=51.4
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHH-HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTA-EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 241 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A-~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~ 241 (427)
-++++-||-+ |.|.|.... +.++.+ +++.++|....+. ....+++++|+|+||..+...+..+...
T Consensus 220 Gf~V~~iDwr-gpg~s~~~~-------~~ddY~~~~i~~al~~v~~~---~g~~kv~lvG~cmGGtl~a~ala~~aa~-- 286 (532)
T TIGR01838 220 GHTVFVISWR-NPDASQADK-------TFDDYIRDGVIAALEVVEAI---TGEKQVNCVGYCIGGTLLSTALAYLAAR-- 286 (532)
T ss_pred CcEEEEEECC-CCCcccccC-------ChhhhHHHHHHHHHHHHHHh---cCCCCeEEEEECcCcHHHHHHHHHHHHh--
Confidence 3678889975 888874321 222233 3455656555443 4567899999999997654422222221
Q ss_pred hcCCcceecceeeeccCccCcc
Q 041833 242 ATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 242 ~~~~~~inLkGi~ign~~id~~ 263 (427)
...-.++++++.+..+|..
T Consensus 287 ---~~~~rv~slvll~t~~Df~ 305 (532)
T TIGR01838 287 ---GDDKRIKSATFFTTLLDFS 305 (532)
T ss_pred ---CCCCccceEEEEecCcCCC
Confidence 1123478888877777754
No 83
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.53 E-value=0.00098 Score=63.21 Aligned_cols=39 Identities=21% Similarity=0.238 Sum_probs=28.9
Q ss_pred CCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 211 QFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 211 ~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
..-.+++|++|.|-||.....|+... +-.+.++++..|.
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~----------pd~faa~a~~sG~ 131 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAY----------PDLFAAVAVVSGV 131 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhC----------CccceEEEeeccc
Confidence 56677899999999997776666643 3446777776665
No 84
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=97.51 E-value=0.0011 Score=63.42 Aligned_cols=192 Identities=16% Similarity=0.206 Sum_probs=117.7
Q ss_pred CCCCceEeecCCCCch-hHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHH
Q 041833 116 DSKPLVLWLNGGPGCS-SIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRT 194 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~S-s~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~ 194 (427)
...+++|+.||--.-- .+. -+|.+++= .=..|++=.|-- |.|.|.++..+. +.-..
T Consensus 58 ~~~~~lly~hGNa~Dlgq~~-~~~~~l~~-----------------~ln~nv~~~DYS-GyG~S~G~psE~----n~y~D 114 (258)
T KOG1552|consen 58 AAHPTLLYSHGNAADLGQMV-ELFKELSI-----------------FLNCNVVSYDYS-GYGRSSGKPSER----NLYAD 114 (258)
T ss_pred ccceEEEEcCCcccchHHHH-HHHHHHhh-----------------cccceEEEEecc-cccccCCCcccc----cchhh
Confidence 4469999999861100 332 34433322 224688999974 999999876542 44555
Q ss_pred HHHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHh
Q 041833 195 AEDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFW 273 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~ 273 (427)
.+.+++.|++ ++ +..+++|+|.|.|..-.-.||. + .+ +.|+++-+|.++-..-.......
T Consensus 115 i~avye~Lr~------~~g~~~~Iil~G~SiGt~~tv~Las----r------~~--~~alVL~SPf~S~~rv~~~~~~~- 175 (258)
T KOG1552|consen 115 IKAVYEWLRN------RYGSPERIILYGQSIGTVPTVDLAS----R------YP--LAAVVLHSPFTSGMRVAFPDTKT- 175 (258)
T ss_pred HHHHHHHHHh------hcCCCceEEEEEecCCchhhhhHhh----c------CC--cceEEEeccchhhhhhhccCcce-
Confidence 6677777764 45 5789999999999843223333 1 23 99999999998754321110000
Q ss_pred hhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhHHHHH
Q 041833 274 WSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSI 353 (427)
Q Consensus 274 ~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i 353 (427)
..|-.+... ...+. .|. .++||++|..|-++|+....+..
T Consensus 176 ---------------------------~~~~d~f~~----i~kI~--~i~-------~PVLiiHgtdDevv~~sHg~~Ly 215 (258)
T KOG1552|consen 176 ---------------------------TYCFDAFPN----IEKIS--KIT-------CPVLIIHGTDDEVVDFSHGKALY 215 (258)
T ss_pred ---------------------------EEeeccccc----cCcce--ecc-------CCEEEEecccCceecccccHHHH
Confidence 000000000 00000 111 24789999999999999887776
Q ss_pred HhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 354 DALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 354 ~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
+..+-+ ....+|+||||--..--|+ -++.+++|+..
T Consensus 216 e~~k~~-----------------------~epl~v~g~gH~~~~~~~~-yi~~l~~f~~~ 251 (258)
T KOG1552|consen 216 ERCKEK-----------------------VEPLWVKGAGHNDIELYPE-YIEHLRRFISS 251 (258)
T ss_pred Hhcccc-----------------------CCCcEEecCCCcccccCHH-HHHHHHHHHHH
Confidence 654322 3458899999998776664 46777778754
No 85
>COG0400 Predicted esterase [General function prediction only]
Probab=97.42 E-value=0.002 Score=60.51 Aligned_cols=130 Identities=18% Similarity=0.218 Sum_probs=87.6
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchh
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGL 269 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~ 269 (427)
.....+..+.+||....+.+ ....+++++.|-|=|++++.++.... +-.++|+++-.|..-...+..
T Consensus 75 dl~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~----------~~~~~~ail~~g~~~~~~~~~-- 141 (207)
T COG0400 75 DLDLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTL----------PGLFAGAILFSGMLPLEPELL-- 141 (207)
T ss_pred hHHHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhC----------chhhccchhcCCcCCCCCccc--
Confidence 44556677777787776665 34467899999999997766665532 345888888777754332100
Q ss_pred hhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccChhhH
Q 041833 270 FQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIPVTST 349 (427)
Q Consensus 270 ~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p~~gt 349 (427)
. .+...++|+.+|..|.+||...+
T Consensus 142 -------------------~-------------------------------------~~~~~pill~hG~~Dpvvp~~~~ 165 (207)
T COG0400 142 -------------------P-------------------------------------DLAGTPILLSHGTEDPVVPLALA 165 (207)
T ss_pred -------------------c-------------------------------------ccCCCeEEEeccCcCCccCHHHH
Confidence 0 12235578999999999999999
Q ss_pred HHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 350 RYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 350 ~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
++..+.|.-.+. +..+.++. .||.++. +.++.+++|+.+
T Consensus 166 ~~l~~~l~~~g~--------------------~v~~~~~~-~GH~i~~----e~~~~~~~wl~~ 204 (207)
T COG0400 166 EALAEYLTASGA--------------------DVEVRWHE-GGHEIPP----EELEAARSWLAN 204 (207)
T ss_pred HHHHHHHHHcCC--------------------CEEEEEec-CCCcCCH----HHHHHHHHHHHh
Confidence 988877753332 34556666 8999964 445666667754
No 86
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.40 E-value=0.0038 Score=59.51 Aligned_cols=199 Identities=13% Similarity=0.126 Sum_probs=108.8
Q ss_pred ceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhc
Q 041833 164 ANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQAT 243 (427)
Q Consensus 164 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~ 243 (427)
.-++-|+.| |-|--+.... . .+.+..|+.+...|+. -+.++|+.++||||||+.+=.+|+++.+..
T Consensus 34 iel~avqlP-GR~~r~~ep~---~-~di~~Lad~la~el~~------~~~d~P~alfGHSmGa~lAfEvArrl~~~g--- 99 (244)
T COG3208 34 IELLAVQLP-GRGDRFGEPL---L-TDIESLADELANELLP------PLLDAPFALFGHSMGAMLAFEVARRLERAG--- 99 (244)
T ss_pred hheeeecCC-CcccccCCcc---c-ccHHHHHHHHHHHhcc------ccCCCCeeecccchhHHHHHHHHHHHHHcC---
Confidence 457888888 8876554432 2 2677788888776652 267889999999999998888888876653
Q ss_pred CCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHH-HHHhhcCCcccccc
Q 041833 244 GEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLE-VADNELGNIDQYNR 322 (427)
Q Consensus 244 ~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~-~~~~~~g~in~Ydi 322 (427)
...+++.|.. +--|..... ... +.+-|.+..+.+.+.-.-....-.+.+.....- .+.....-+..|..
T Consensus 100 ----~~p~~lfisg-~~aP~~~~~---~~i--~~~~D~~~l~~l~~lgG~p~e~led~El~~l~LPilRAD~~~~e~Y~~ 169 (244)
T COG3208 100 ----LPPRALFISG-CRAPHYDRG---KQI--HHLDDADFLADLVDLGGTPPELLEDPELMALFLPILRADFRALESYRY 169 (244)
T ss_pred ----CCcceEEEec-CCCCCCccc---CCc--cCCCHHHHHHHHHHhCCCChHHhcCHHHHHHHHHHHHHHHHHhccccc
Confidence 1144444432 212210000 000 011122223333221111000001111111111 11111112233333
Q ss_pred ccccccc-ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcH
Q 041833 323 DLLTFLV-LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPK 401 (427)
Q Consensus 323 ~~p~~lp-~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe 401 (427)
..+ .| .....++.|+.|..|...-...|-+..+ +.+++-++.| |||-+.+|.+
T Consensus 170 ~~~--~pl~~pi~~~~G~~D~~vs~~~~~~W~~~t~-----------------------~~f~l~~fdG-gHFfl~~~~~ 223 (244)
T COG3208 170 PPP--APLACPIHAFGGEKDHEVSRDELGAWREHTK-----------------------GDFTLRVFDG-GHFFLNQQRE 223 (244)
T ss_pred CCC--CCcCcceEEeccCcchhccHHHHHHHHHhhc-----------------------CCceEEEecC-cceehhhhHH
Confidence 221 11 1234599999999999887777765332 1356666666 9999999999
Q ss_pred HHHHHHHHHHc
Q 041833 402 PALTLIKSFLS 412 (427)
Q Consensus 402 ~~~~mi~~fL~ 412 (427)
.+...|.+.+.
T Consensus 224 ~v~~~i~~~l~ 234 (244)
T COG3208 224 EVLARLEQHLA 234 (244)
T ss_pred HHHHHHHHHhh
Confidence 99999988875
No 87
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.29 E-value=0.00015 Score=71.05 Aligned_cols=113 Identities=16% Similarity=0.154 Sum_probs=66.8
Q ss_pred CCCCceEeecCCCCch-hHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHH
Q 041833 116 DSKPLVLWLNGGPGCS-SIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRT 194 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~S-s~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~ 194 (427)
.++|++|++||-.|.. ..+.-.+ .+.+.-.+..|+|.+|-+.+....|.. . . .+....
T Consensus 34 ~~~p~vilIHG~~~~~~~~~~~~l----------------~~~ll~~~~~nVi~vD~~~~~~~~y~~--a--~-~~~~~v 92 (275)
T cd00707 34 PSRPTRFIIHGWTSSGEESWISDL----------------RKAYLSRGDYNVIVVDWGRGANPNYPQ--A--V-NNTRVV 92 (275)
T ss_pred CCCCcEEEEcCCCCCCCCcHHHHH----------------HHHHHhcCCCEEEEEECccccccChHH--H--H-HhHHHH
Confidence 4579999999977654 2220000 000000135899999987331111100 0 0 134455
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
++++..+|+...+.. .+..++++|+|||+||+.+-.+|.++. -+++.|+..+|..
T Consensus 93 ~~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~----------~~v~~iv~LDPa~ 147 (275)
T cd00707 93 GAELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLN----------GKLGRITGLDPAG 147 (275)
T ss_pred HHHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhc----------CccceeEEecCCc
Confidence 677777776554432 244568999999999998888877542 2478888877763
No 88
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=97.16 E-value=0.0026 Score=59.52 Aligned_cols=216 Identities=20% Similarity=0.273 Sum_probs=125.6
Q ss_pred eeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCC
Q 041833 102 RALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSN 181 (427)
Q Consensus 102 ~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~ 181 (427)
-.|-=|.+.+++ +.|++|.+||--|- | |.+..+- + .... +-..||+-+|- +|-|.|.+.
T Consensus 65 vtL~a~~~~~E~---S~pTlLyfh~NAGN--m--Ghr~~i~------~--~fy~-----~l~mnv~ivsY-RGYG~S~Gs 123 (300)
T KOG4391|consen 65 VTLDAYLMLSES---SRPTLLYFHANAGN--M--GHRLPIA------R--VFYV-----NLKMNVLIVSY-RGYGKSEGS 123 (300)
T ss_pred eeEeeeeecccC---CCceEEEEccCCCc--c--cchhhHH------H--HHHH-----HcCceEEEEEe-eccccCCCC
Confidence 345544444433 78999999986542 2 2222110 0 0000 13578999997 599999987
Q ss_pred CCC-CCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 182 TSS-DITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 182 ~~~-~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
+.+ +.. .|.+++ ..++-..|....+++++.|.|-||..+-++|.+- .-.+.++++-|-.+
T Consensus 124 psE~GL~--lDs~av-------ldyl~t~~~~dktkivlfGrSlGGAvai~lask~----------~~ri~~~ivENTF~ 184 (300)
T KOG4391|consen 124 PSEEGLK--LDSEAV-------LDYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKN----------SDRISAIIVENTFL 184 (300)
T ss_pred cccccee--ccHHHH-------HHHHhcCccCCcceEEEEecccCCeeEEEeeccc----------hhheeeeeeechhc
Confidence 653 222 333333 2244567888899999999999998888888743 33578888888876
Q ss_pred Cccccc-chhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCC
Q 041833 261 DDYHDY-LGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGD 339 (427)
Q Consensus 261 d~~~~~-~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd 339 (427)
+-.... ....+|.. +.+-..|-.+.+.. .+.+. .-.++.|+++|-
T Consensus 185 SIp~~~i~~v~p~~~----------k~i~~lc~kn~~~S--------~~ki~----------------~~~~P~LFiSGl 230 (300)
T KOG4391|consen 185 SIPHMAIPLVFPFPM----------KYIPLLCYKNKWLS--------YRKIG----------------QCRMPFLFISGL 230 (300)
T ss_pred cchhhhhheeccchh----------hHHHHHHHHhhhcc--------hhhhc----------------cccCceEEeecC
Confidence 642211 11222221 12223332221100 01110 011347899999
Q ss_pred CCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCC
Q 041833 340 TDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGR 414 (427)
Q Consensus 340 ~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~ 414 (427)
.|-++|..-.+.....-+-..+ .+..+++.-|.-.. +-+--+++|++||.-.
T Consensus 231 kDelVPP~~Mr~Ly~~c~S~~K----------------------rl~eFP~gtHNDT~-i~dGYfq~i~dFlaE~ 282 (300)
T KOG4391|consen 231 KDELVPPVMMRQLYELCPSRTK----------------------RLAEFPDGTHNDTW-ICDGYFQAIEDFLAEV 282 (300)
T ss_pred ccccCCcHHHHHHHHhCchhhh----------------------hheeCCCCccCceE-EeccHHHHHHHHHHHh
Confidence 9999999877766654433222 35667777776432 3455678888887643
No 89
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=97.11 E-value=0.0017 Score=60.13 Aligned_cols=240 Identities=16% Similarity=0.075 Sum_probs=123.1
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
|.+|-|.-.- .-.--||.+-|.-||+...++.-.+ ..++ - ....||-||+| |-|-|..
T Consensus 30 g~ql~y~~~G-----~G~~~iLlipGalGs~~tDf~pql~-------------~l~k-~--l~~TivawDPp-GYG~SrP 87 (277)
T KOG2984|consen 30 GTQLGYCKYG-----HGPNYILLIPGALGSYKTDFPPQLL-------------SLFK-P--LQVTIVAWDPP-GYGTSRP 87 (277)
T ss_pred CceeeeeecC-----CCCceeEecccccccccccCCHHHH-------------hcCC-C--CceEEEEECCC-CCCCCCC
Confidence 4577775222 1234688899999998876222111 1111 0 12789999977 9999985
Q ss_pred CCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
... ++...--.+.|++.+..++. ++-.+|-|.|-|=||..+-..|.+-.+. +|---|.-++..+
T Consensus 88 P~R-kf~~~ff~~Da~~avdLM~a-------Lk~~~fsvlGWSdGgiTalivAak~~e~--------v~rmiiwga~ayv 151 (277)
T KOG2984|consen 88 PER-KFEVQFFMKDAEYAVDLMEA-------LKLEPFSVLGWSDGGITALIVAAKGKEK--------VNRMIIWGAAAYV 151 (277)
T ss_pred Ccc-cchHHHHHHhHHHHHHHHHH-------hCCCCeeEeeecCCCeEEEEeeccChhh--------hhhheeeccccee
Confidence 432 22111122333443433332 3456899999999998766655543332 2222222233333
Q ss_pred CcccccchhhhHhhhcccC-----CHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCccccccccccccccc--ce
Q 041833 261 DDYHDYLGLFQFWWSAGLI-----SDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLF--DF 333 (427)
Q Consensus 261 d~~~~~~~~~~f~~~~glI-----~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i--~~ 333 (427)
..... .++. |+- +....+.+++.-.+.+ -...|....+.+.+.....+ -++- ..++|.+ ..
T Consensus 152 n~~~~------ma~k-giRdv~kWs~r~R~P~e~~Yg~e~---f~~~wa~wvD~v~qf~~~~d-G~fC-r~~lp~vkcPt 219 (277)
T KOG2984|consen 152 NHLGA------MAFK-GIRDVNKWSARGRQPYEDHYGPET---FRTQWAAWVDVVDQFHSFCD-GRFC-RLVLPQVKCPT 219 (277)
T ss_pred cchhH------HHHh-chHHHhhhhhhhcchHHHhcCHHH---HHHHHHHHHHHHHHHhhcCC-CchH-hhhcccccCCe
Confidence 22111 0000 110 0111111111111111 12234444444333211000 0110 0156654 45
Q ss_pred eEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcC
Q 041833 334 LYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSG 413 (427)
Q Consensus 334 Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g 413 (427)
||.+|..|..|+-...-..-..+. ...+-+.+..+|.....-|+....++.+|++.
T Consensus 220 li~hG~kDp~~~~~hv~fi~~~~~------------------------~a~~~~~peGkHn~hLrya~eFnklv~dFl~~ 275 (277)
T KOG2984|consen 220 LIMHGGKDPFCGDPHVCFIPVLKS------------------------LAKVEIHPEGKHNFHLRYAKEFNKLVLDFLKS 275 (277)
T ss_pred eEeeCCcCCCCCCCCccchhhhcc------------------------cceEEEccCCCcceeeechHHHHHHHHHHHhc
Confidence 899999999999764432222111 12456788899999999999999999999975
Q ss_pred C
Q 041833 414 R 414 (427)
Q Consensus 414 ~ 414 (427)
.
T Consensus 276 ~ 276 (277)
T KOG2984|consen 276 T 276 (277)
T ss_pred c
Confidence 3
No 90
>PRK07868 acyl-CoA synthetase; Validated
Probab=97.09 E-value=0.015 Score=67.05 Aligned_cols=57 Identities=16% Similarity=0.092 Sum_probs=45.3
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEE-EEECCCCCcCCc---CCcHHHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTF-VTVRGAGHEVPL---HRPKPALTLI 407 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltf-v~V~gAGHmvP~---dqPe~~~~mi 407 (427)
+.|++.|+.|.++|....+.+.+.+.- ..+ ..+.++|||.++ .-|+.....|
T Consensus 299 P~L~i~G~~D~ivp~~~~~~l~~~i~~------------------------a~~~~~~~~~GH~g~~~g~~a~~~~wp~i 354 (994)
T PRK07868 299 PVLAFVGEVDDIGQPASVRGIRRAAPN------------------------AEVYESLIRAGHFGLVVGSRAAQQTWPTV 354 (994)
T ss_pred CEEEEEeCCCCCCCHHHHHHHHHhCCC------------------------CeEEEEeCCCCCEeeeechhhhhhhChHH
Confidence 468999999999999999988776642 234 567999999654 4577778888
Q ss_pred HHHHc
Q 041833 408 KSFLS 412 (427)
Q Consensus 408 ~~fL~ 412 (427)
.+||.
T Consensus 355 ~~wl~ 359 (994)
T PRK07868 355 ADWVK 359 (994)
T ss_pred HHHHH
Confidence 99988
No 91
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=97.08 E-value=0.0016 Score=67.79 Aligned_cols=81 Identities=19% Similarity=0.126 Sum_probs=53.8
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
.+|||-+|-| |.|-|...... ......|+++.++|+...+.. .+.-.+++|+|||+||+.+-.+|.+.
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a~----~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~------ 140 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTSA----AYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLT------ 140 (442)
T ss_pred CCEEEEEECC-CcCCCCCcccc----ccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhC------
Confidence 4799999998 77755322111 134667788888776543332 35567899999999999888777632
Q ss_pred cCCcceecceeeeccCc
Q 041833 243 TGEKAINLKGYMVGNAL 259 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~ 259 (427)
+-.|..|++.+|.
T Consensus 141 ----p~rV~rItgLDPA 153 (442)
T TIGR03230 141 ----KHKVNRITGLDPA 153 (442)
T ss_pred ----CcceeEEEEEcCC
Confidence 2236667766664
No 92
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=97.03 E-value=0.016 Score=64.63 Aligned_cols=206 Identities=15% Similarity=0.232 Sum_probs=106.3
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHcc--------------CCCCCCeEEecCCcCcc
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFS--------------QFKGRDFYISGESYGGH 227 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp--------------~~~~~~~yI~GESYGG~ 227 (427)
+-+++|++|.+ |+|.|.+.... ...+..+|..+.+ +|+.... .+-+.++-++|.||||.
T Consensus 278 rGYaVV~~D~R-Gtg~SeG~~~~-----~~~~E~~D~~~vI-eWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~ 350 (767)
T PRK05371 278 RGFAVVYVSGI-GTRGSDGCPTT-----GDYQEIESMKAVI-DWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGT 350 (767)
T ss_pred CCeEEEEEcCC-CCCCCCCcCcc-----CCHHHHHHHHHHH-HHHhhCCccccccccccccccCCCCCeeEEEEEcHHHH
Confidence 46899999975 99999876321 2344556666644 3766321 12245899999999995
Q ss_pred chHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCH------HHHHHHHHhhhc-----cCC
Q 041833 228 YVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISD------DTYKQLNLLCDY-----ESF 296 (427)
Q Consensus 228 yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~------~~~~~l~~~C~~-----~~~ 296 (427)
..-.+|. . .+-.||.|+...++.+. +++++..|++.. +....+...|.. ...
T Consensus 351 ~~~~aAa----~------~pp~LkAIVp~a~is~~-------yd~yr~~G~~~~~~g~~ged~d~l~~~~~~r~~~~~~~ 413 (767)
T PRK05371 351 LPNAVAT----T------GVEGLETIIPEAAISSW-------YDYYRENGLVRAPGGYQGEDLDVLAELTYSRNLLAGDY 413 (767)
T ss_pred HHHHHHh----h------CCCcceEEEeeCCCCcH-------HHHhhcCCceeccCCcCCcchhhHHHHhhhcccCcchh
Confidence 5544443 1 24568999987777653 233334332210 000111111111 000
Q ss_pred CCCchhHHHHHHHHHh----hcCCcccc-cccccc-ccc--ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeee
Q 041833 297 VHPSSSCDKVLEVADN----ELGNIDQY-NRDLLT-FLV--LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWY 368 (427)
Q Consensus 297 ~~~~~~C~~~~~~~~~----~~g~in~Y-di~~p~-~lp--~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~ 368 (427)
......|...+..+.. ..+..+.| +-+.+. .+. .+..|+++|-.|..++..++.++.+.|.-.+..
T Consensus 414 ~~~~~~~~~~~~~~~~~~~~~~~~y~~fW~~rn~~~~~~kIkvPvLlIhGw~D~~V~~~~s~~ly~aL~~~g~p------ 487 (767)
T PRK05371 414 LRHNEACEKLLAELTAAQDRKTGDYNDFWDDRNYLKDADKIKASVLVVHGLNDWNVKPKQVYQWWDALPENGVP------ 487 (767)
T ss_pred hcchHHHHHHHhhhhhhhhhcCCCccHHHHhCCHhhHhhCCCCCEEEEeeCCCCCCChHHHHHHHHHHHhcCCC------
Confidence 0112233333222111 11111111 011000 011 244689999999999999998888887532211
Q ss_pred eCCceeeeeeeecCeEEEEECCCCCcCCcC-CcHHHHHHHHHHHc
Q 041833 369 DEGQVGGWTQEYSGLTFVTVRGAGHEVPLH-RPKPALTLIKSFLS 412 (427)
Q Consensus 369 ~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~d-qPe~~~~mi~~fL~ 412 (427)
..+++...||.-+.. ++....+++.+|+.
T Consensus 488 ---------------kkL~l~~g~H~~~~~~~~~d~~e~~~~Wfd 517 (767)
T PRK05371 488 ---------------KKLFLHQGGHVYPNNWQSIDFRDTMNAWFT 517 (767)
T ss_pred ---------------eEEEEeCCCccCCCchhHHHHHHHHHHHHH
Confidence 123566778965443 34444555555543
No 93
>PLN00021 chlorophyllase
Probab=96.97 E-value=0.0029 Score=63.22 Aligned_cols=115 Identities=13% Similarity=0.123 Sum_probs=68.3
Q ss_pred CCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHH
Q 041833 115 PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRT 194 (427)
Q Consensus 115 p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~ 194 (427)
....|+||++||+.+..... ..+.+ .+ .+ .-+.++.+|.+ |. +... .. .+.+.
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y-~~l~~-----------~L----as--~G~~VvapD~~-g~--~~~~----~~--~~i~d 101 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFY-SQLLQ-----------HI----AS--HGFIVVAPQLY-TL--AGPD----GT--DEIKD 101 (313)
T ss_pred CCCCCEEEEECCCCCCcccH-HHHHH-----------HH----Hh--CCCEEEEecCC-Cc--CCCC----ch--hhHHH
Confidence 45689999999997765543 33222 01 01 12577888876 43 2111 11 22334
Q ss_pred HHHHHHHHHHHHHH-cc---CCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 195 AEDSLKFLLKWLER-FS---QFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 195 A~d~~~fL~~f~~~-fp---~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
+.++..++.+-++. .| +...++++|+|||+||..+-.+|....+.. ....+++++..+|+..
T Consensus 102 ~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~-----~~~~v~ali~ldPv~g 167 (313)
T PLN00021 102 AAAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVS-----LPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccc-----cccceeeEEeeccccc
Confidence 56666666654332 11 233467999999999988877776543321 2356889998888754
No 94
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=96.93 E-value=0.0024 Score=68.60 Aligned_cols=130 Identities=16% Similarity=0.145 Sum_probs=79.3
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCc-cccceEEEEeCCCCcccC
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSW-NQVANILFLDSPVGVGFS 178 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW-~~~anvlfiDqP~G~GfS 178 (427)
.|..|+...+.-. +....|+||.+||-...+... . +.. .....-| .+-+.+|-+|.+ |+|.|
T Consensus 5 DG~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~-~-----~~~---------~~~~~~l~~~Gy~vv~~D~R-G~g~S 67 (550)
T TIGR00976 5 DGTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLR-W-----GLD---------KTEPAWFVAQGYAVVIQDTR-GRGAS 67 (550)
T ss_pred CCCEEEEEEEecC-CCCCCCEEEEecCCCCchhhc-c-----ccc---------cccHHHHHhCCcEEEEEecc-ccccC
Confidence 3567876555432 234679999999753322110 0 000 0000112 245899999985 99999
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
.+.... + + ...++|+.++++ |+.+.| +.+.++.++|+||||..+..+|.. .+-.|++++..++
T Consensus 68 ~g~~~~-~---~-~~~~~D~~~~i~-~l~~q~-~~~~~v~~~G~S~GG~~a~~~a~~----------~~~~l~aiv~~~~ 130 (550)
T TIGR00976 68 EGEFDL-L---G-SDEAADGYDLVD-WIAKQP-WCDGNVGMLGVSYLAVTQLLAAVL----------QPPALRAIAPQEG 130 (550)
T ss_pred CCceEe-c---C-cccchHHHHHHH-HHHhCC-CCCCcEEEEEeChHHHHHHHHhcc----------CCCceeEEeecCc
Confidence 864211 1 2 456778877655 666655 334689999999999665555441 1346899998888
Q ss_pred ccCcc
Q 041833 259 LTDDY 263 (427)
Q Consensus 259 ~id~~ 263 (427)
..|..
T Consensus 131 ~~d~~ 135 (550)
T TIGR00976 131 VWDLY 135 (550)
T ss_pred ccchh
Confidence 87654
No 95
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=96.82 E-value=0.0076 Score=59.00 Aligned_cols=209 Identities=17% Similarity=0.128 Sum_probs=103.0
Q ss_pred ccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHh
Q 041833 160 WNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRH 239 (427)
Q Consensus 160 W~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~ 239 (427)
-.+.+-++-||.| |...--..-+.+|.--+.++.|+++.+.|..| +-+.++-+|+--|+.+...+|..-
T Consensus 52 i~~~f~i~Hi~aP-Gqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f-------~lk~vIg~GvGAGAnIL~rfAl~~--- 120 (283)
T PF03096_consen 52 ILQNFCIYHIDAP-GQEEGAATLPEGYQYPSMDQLAEMLPEVLDHF-------GLKSVIGFGVGAGANILARFALKH--- 120 (283)
T ss_dssp HHTTSEEEEEE-T-TTSTT-----TT-----HHHHHCTHHHHHHHH-------T---EEEEEETHHHHHHHHHHHHS---
T ss_pred HhhceEEEEEeCC-CCCCCcccccccccccCHHHHHHHHHHHHHhC-------CccEEEEEeeccchhhhhhccccC---
Confidence 3467889999998 88775544445532238999999999988754 344689999987776666666532
Q ss_pred hhhcCCcceecceeeeccCccCcccccchhhhHhh---------hcccCCHHHHHHHHH-h-hhc--cCCCCCchhHHHH
Q 041833 240 NQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWW---------SAGLISDDTYKQLNL-L-CDY--ESFVHPSSSCDKV 306 (427)
Q Consensus 240 ~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~---------~~glI~~~~~~~l~~-~-C~~--~~~~~~~~~C~~~ 306 (427)
+-.+.|+++.|+..... ++.++++ ..|+-+ ...+.+.. . ... ......-..|.+.
T Consensus 121 -------p~~V~GLiLvn~~~~~~----gw~Ew~~~K~~~~~L~~~gmt~-~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~ 188 (283)
T PF03096_consen 121 -------PERVLGLILVNPTCTAA----GWMEWFYQKLSSWLLYSYGMTS-SVKDYLLWHYFGKEEEENNSDLVQTYRQH 188 (283)
T ss_dssp -------GGGEEEEEEES---S-------HHHHHHHHHH-------CTTS--HHHHHHHHHS-HHHHHCT-HHHHHHHHH
T ss_pred -------ccceeEEEEEecCCCCc----cHHHHHHHHHhccccccccccc-chHHhhhhcccccccccccHHHHHHHHHH
Confidence 44589999999876543 2222222 222221 11111110 0 000 0000000011111
Q ss_pred HHH-HH--hhcCCcccccccccc--cc--cccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeee
Q 041833 307 LEV-AD--NELGNIDQYNRDLLT--FL--VLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQE 379 (427)
Q Consensus 307 ~~~-~~--~~~g~in~Ydi~~p~--~l--p~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~ 379 (427)
++. ++ +....++.|+-|.+- .+ ...+.|++.|+.-.-.. .+.+.-.+|+=..
T Consensus 189 l~~~~Np~Nl~~f~~sy~~R~DL~~~~~~~~c~vLlvvG~~Sp~~~--~vv~~ns~Ldp~~------------------- 247 (283)
T PF03096_consen 189 LDERINPKNLALFLNSYNSRTDLSIERPSLGCPVLLVVGDNSPHVD--DVVEMNSKLDPTK------------------- 247 (283)
T ss_dssp HHT-TTHHHHHHHHHHHHT-----SECTTCCS-EEEEEETTSTTHH--HHHHHHHHS-CCC-------------------
T ss_pred HhcCCCHHHHHHHHHHHhccccchhhcCCCCCCeEEEEecCCcchh--hHHHHHhhcCccc-------------------
Confidence 110 00 000011222222110 11 12567899999865332 3456667775322
Q ss_pred ecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCCC
Q 041833 380 YSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGRS 415 (427)
Q Consensus 380 y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~~ 415 (427)
-|++.|.++|=||..+||+...+.|+-||+|.-
T Consensus 248 ---ttllkv~dcGglV~eEqP~klaea~~lFlQG~G 280 (283)
T PF03096_consen 248 ---TTLLKVADCGGLVLEEQPGKLAEAFKLFLQGMG 280 (283)
T ss_dssp ---EEEEEETT-TT-HHHH-HHHHHHHHHHHHHHTT
T ss_pred ---ceEEEecccCCcccccCcHHHHHHHHHHHccCC
Confidence 388999999999999999999999999999864
No 96
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=96.81 E-value=0.0038 Score=58.37 Aligned_cols=102 Identities=13% Similarity=0.156 Sum_probs=69.2
Q ss_pred ceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHH
Q 041833 120 LVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSL 199 (427)
Q Consensus 120 l~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~ 199 (427)
.|+++++|=|.++....+...+++ . ..++..|+.| |.+.. .... .+.++.|++..
T Consensus 2 ~lf~~p~~gG~~~~y~~la~~l~~-------------~-----~~~v~~i~~~-~~~~~-----~~~~-~si~~la~~y~ 56 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLARALPD-------------D-----VIGVYGIEYP-GRGDD-----EPPP-DSIEELASRYA 56 (229)
T ss_dssp EEEEESSTTCSGGGGHHHHHHHTT-------------T-----EEEEEEECST-TSCTT-----SHEE-SSHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHHHhCCC-------------C-----eEEEEEEecC-CCCCC-----CCCC-CCHHHHHHHHH
Confidence 578899888866665333333322 0 3578889987 66611 1111 37888888888
Q ss_pred HHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 200 KFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 200 ~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
+.|+. .. ...|++|+|+|+||..+-.+|+++.++ ...+..+++.++.
T Consensus 57 ~~I~~---~~---~~gp~~L~G~S~Gg~lA~E~A~~Le~~-------G~~v~~l~liD~~ 103 (229)
T PF00975_consen 57 EAIRA---RQ---PEGPYVLAGWSFGGILAFEMARQLEEA-------GEEVSRLILIDSP 103 (229)
T ss_dssp HHHHH---HT---SSSSEEEEEETHHHHHHHHHHHHHHHT-------T-SESEEEEESCS
T ss_pred HHhhh---hC---CCCCeeehccCccHHHHHHHHHHHHHh-------hhccCceEEecCC
Confidence 87764 22 223999999999999999999888765 3457888888854
No 97
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.75 E-value=0.0028 Score=65.11 Aligned_cols=84 Identities=20% Similarity=0.214 Sum_probs=55.7
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhh
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 241 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~ 241 (427)
+-.+||-+|-| |+|+|..-. + + +..+.++..+.+|+...|+.-..++.++|-|+||.|++.+|..-
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l---~--~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le----- 282 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L---T--QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALE----- 282 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S------S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHT-----
T ss_pred CCCEEEEEccC-CCcccccCC---C---C--cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhc-----
Confidence 44689999999 999985321 1 1 11234566677788888999888999999999999998888631
Q ss_pred hcCCcceecceeeeccCccCccc
Q 041833 242 ATGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 242 ~~~~~~inLkGi~ign~~id~~~ 264 (427)
.-.||+++.-.|.++...
T Consensus 283 -----~~RlkavV~~Ga~vh~~f 300 (411)
T PF06500_consen 283 -----DPRLKAVVALGAPVHHFF 300 (411)
T ss_dssp -----TTT-SEEEEES---SCGG
T ss_pred -----ccceeeEeeeCchHhhhh
Confidence 234899888777766543
No 98
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=96.73 E-value=0.14 Score=50.14 Aligned_cols=216 Identities=13% Similarity=0.059 Sum_probs=117.1
Q ss_pred ccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHh
Q 041833 160 WNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRH 239 (427)
Q Consensus 160 W~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~ 239 (427)
..+.+-+.-||.| |.-.--..=+.+|.--+.++.|+++...|+.| .-+-++=+|+--|..+...+|...
T Consensus 75 i~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-------~lk~vIg~GvGAGAyIL~rFAl~h--- 143 (326)
T KOG2931|consen 75 ILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-------GLKSVIGMGVGAGAYILARFALNH--- 143 (326)
T ss_pred HHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-------CcceEEEecccccHHHHHHHHhcC---
Confidence 3455788899988 76554333334422238999999999988854 333577788877665555566532
Q ss_pred hhhcCCcceecceeeeccCccCcccccchhhhHhhh---------cccCCHHHHHHHHH-hhhccC---CCCCchhHHHH
Q 041833 240 NQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWS---------AGLISDDTYKQLNL-LCDYES---FVHPSSSCDKV 306 (427)
Q Consensus 240 ~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~---------~glI~~~~~~~l~~-~C~~~~---~~~~~~~C~~~ 306 (427)
+-.+.|++++|+.-.. .++.+++++ .|+- ....+.+.. .-..+. ....-.+|.+.
T Consensus 144 -------p~rV~GLvLIn~~~~a----~gwiew~~~K~~s~~l~~~Gmt-~~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~ 211 (326)
T KOG2931|consen 144 -------PERVLGLVLINCDPCA----KGWIEWAYNKVSSNLLYYYGMT-QGVKDYLLAHHFGKEELGNNSDIVQEYRQH 211 (326)
T ss_pred -------hhheeEEEEEecCCCC----chHHHHHHHHHHHHHHHhhchh-hhHHHHHHHHHhccccccccHHHHHHHHHH
Confidence 4458899998876332 223333322 1211 111111111 000000 00011123222
Q ss_pred HHHHHh---hcCCccccccccc------ccccc--cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceee
Q 041833 307 LEVADN---ELGNIDQYNRDLL------TFLVL--FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGG 375 (427)
Q Consensus 307 ~~~~~~---~~g~in~Ydi~~p------~~lp~--i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~G 375 (427)
+..-.+ ..-.++.|+-|.+ ..... .++|++.||.-.-+. .+.....+|+=.
T Consensus 212 l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~Sp~~~--~vv~~n~~Ldp~---------------- 273 (326)
T KOG2931|consen 212 LGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDNSPHVS--AVVECNSKLDPT---------------- 273 (326)
T ss_pred HHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCCCchhh--hhhhhhcccCcc----------------
Confidence 221100 0011233443322 11111 346899998754322 233444445422
Q ss_pred eeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCCCCCCCccc
Q 041833 376 WTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGRSMPCLKRV 422 (427)
Q Consensus 376 y~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~~l~~~~~~ 422 (427)
+-|++.|.++|-++..+||....+.|+-|++|.-+-....|
T Consensus 274 ------~ttllk~~d~g~l~~e~qP~kl~ea~~~FlqG~Gy~~s~~~ 314 (326)
T KOG2931|consen 274 ------YTTLLKMADCGGLVQEEQPGKLAEAFKYFLQGMGYLPSASM 314 (326)
T ss_pred ------cceEEEEcccCCcccccCchHHHHHHHHHHccCCccccccc
Confidence 23789999999999999999999999999999887544433
No 99
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=96.71 E-value=0.056 Score=55.49 Aligned_cols=131 Identities=21% Similarity=0.342 Sum_probs=80.8
Q ss_pred eEEecCCCCeeEEEEEEeecc----CCCCCCceEeecCCCCchhHhh-----hhhhhcCCeEEcCCCCceeeCCCCcccc
Q 041833 93 YVTVNEESGRALFYWFVEAVE----DPDSKPLVLWLNGGPGCSSIAY-----GEAEEIGPFHIKPDGKTLYLNPYSWNQV 163 (427)
Q Consensus 93 y~~v~~~~~~~lFy~f~es~~----~p~~~Pl~lWlnGGPG~Ss~~~-----g~~~e~GP~~~~~~~~~l~~n~~sW~~~ 163 (427)
+|...+ .|.-..=|+..... +..++|++|.|.|=.|.|.-.| ...++.| ++
T Consensus 97 ii~~~D-GG~~~lDW~~~~~~~~~~~~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r------------------ 156 (409)
T KOG1838|consen 97 IIKTSD-GGTVTLDWVENPDSRCRTDDGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR------------------ 156 (409)
T ss_pred EEEeCC-CCEEEEeeccCcccccCCCCCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE------------------
Confidence 455543 34445557655432 3468899999999998886431 3344555 43
Q ss_pred ceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhc
Q 041833 164 ANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQAT 243 (427)
Q Consensus 164 anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~ 243 (427)
++-+- ++|.|.|.-+++.-|.. +. .+|+-++++---++|| ..+++.+|.|+||.++ .+++-+..+
T Consensus 157 --~VVfN-~RG~~g~~LtTpr~f~a-g~---t~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~iL---~nYLGE~g~-- 221 (409)
T KOG1838|consen 157 --VVVFN-HRGLGGSKLTTPRLFTA-GW---TEDLREVVNHIKKRYP---QAPLFAVGFSMGGNIL---TNYLGEEGD-- 221 (409)
T ss_pred --EEEEC-CCCCCCCccCCCceeec-CC---HHHHHHHHHHHHHhCC---CCceEEEEecchHHHH---HHHhhhccC--
Confidence 22222 57999999887765542 33 3455554444335555 5699999999999643 444433322
Q ss_pred CCcceecceeeeccCcc
Q 041833 244 GEKAINLKGYMVGNALT 260 (427)
Q Consensus 244 ~~~~inLkGi~ign~~i 260 (427)
+ .--..|+++-|||-
T Consensus 222 -~-~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 222 -N-TPLIAAVAVCNPWD 236 (409)
T ss_pred -C-CCceeEEEEeccch
Confidence 1 23367899999983
No 100
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=96.58 E-value=0.017 Score=56.37 Aligned_cols=120 Identities=18% Similarity=0.291 Sum_probs=82.5
Q ss_pred CCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCC----CCCCccCChHH
Q 041833 118 KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNT----SSDITTNGDKR 193 (427)
Q Consensus 118 ~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~----~~~~~~~~~~~ 193 (427)
+++++|+-|-||.-... --|.+ .|..+- +..+.|+-+.+ +|+-.+.... .... .+.++
T Consensus 2 ~~li~~IPGNPGlv~fY-~~Fl~-----------~L~~~l---~~~~~i~~ish-~Gh~~~~~~~~~~~~~~~--~sL~~ 63 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEFY-EEFLS-----------ALYEKL---NPQFEILGISH-AGHSTSPSNSKFSPNGRL--FSLQD 63 (266)
T ss_pred cEEEEEECCCCChHHHH-HHHHH-----------HHHHhC---CCCCeeEEecC-CCCcCCcccccccCCCCc--cCHHH
Confidence 57999999999999885 55544 222221 45566777775 3554444331 1222 38889
Q ss_pred HHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 194 TAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 194 ~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
..+.-.+||+++....+ ....+++|+|||-|+ +++.+++++.. ....+++++++.=|.+...
T Consensus 64 QI~hk~~~i~~~~~~~~-~~~~~liLiGHSIGa----yi~levl~r~~---~~~~~V~~~~lLfPTi~~i 125 (266)
T PF10230_consen 64 QIEHKIDFIKELIPQKN-KPNVKLILIGHSIGA----YIALEVLKRLP---DLKFRVKKVILLFPTIEDI 125 (266)
T ss_pred HHHHHHHHHHHHhhhhc-CCCCcEEEEeCcHHH----HHHHHHHHhcc---ccCCceeEEEEeCCccccc
Confidence 99999999998887543 246789999999998 77888877753 2357788888777776543
No 101
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=96.42 E-value=0.1 Score=51.53 Aligned_cols=46 Identities=20% Similarity=0.155 Sum_probs=37.1
Q ss_pred CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccc
Q 041833 213 KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 213 ~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~ 264 (427)
..+++.|+|+|-||+.+..++....+.. ....++.++..|++|...
T Consensus 150 dp~~i~v~GdSAGG~La~~~a~~~~~~~------~~~p~~~~li~P~~d~~~ 195 (312)
T COG0657 150 DPSRIAVAGDSAGGHLALALALAARDRG------LPLPAAQVLISPLLDLTS 195 (312)
T ss_pred CccceEEEecCcccHHHHHHHHHHHhcC------CCCceEEEEEecccCCcc
Confidence 3668999999999998888888776542 345788889999998776
No 102
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=96.26 E-value=0.1 Score=51.60 Aligned_cols=71 Identities=18% Similarity=0.299 Sum_probs=52.9
Q ss_pred cccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCC--cCCcHHHH
Q 041833 327 FLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVP--LHRPKPAL 404 (427)
Q Consensus 327 ~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP--~dqPe~~~ 404 (427)
..|..+.+||+|..|.++|+..++..++.+--.+. .+++|.++.+++|+.. ...|+. +
T Consensus 216 ~~P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~-------------------a~V~~~~~~~~~H~~~~~~~~~~a-~ 275 (290)
T PF03583_consen 216 WTPTVPVLIYQGTADEVVPPADTDALVAKWCAAGG-------------------ADVEYVRYPGGGHLGAAFASAPDA-L 275 (290)
T ss_pred CCCCCCEEEEecCCCCCCChHHHHHHHHHHHHcCC-------------------CCEEEEecCCCChhhhhhcCcHHH-H
Confidence 35677889999999999999999999887643320 1578999999999965 466655 4
Q ss_pred HHHHHHHcCCCCC
Q 041833 405 TLIKSFLSGRSMP 417 (427)
Q Consensus 405 ~mi~~fL~g~~l~ 417 (427)
.-|.+=+.|++.+
T Consensus 276 ~Wl~~rf~G~~~~ 288 (290)
T PF03583_consen 276 AWLDDRFAGKPAT 288 (290)
T ss_pred HHHHHHHCCCCCC
Confidence 5555556677654
No 103
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=96.18 E-value=0.017 Score=53.36 Aligned_cols=175 Identities=16% Similarity=0.045 Sum_probs=93.2
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHH---ccCCCCCCeEEecCCcCccchHHHHHHHHHh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLER---FSQFKGRDFYISGESYGGHYVPQLSKAIIRH 239 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~---fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~ 239 (427)
-+.++-+|-+.. +.. .-....+|+.++++-..+. + .+..++++|+|+|-||+.+..++..+.+.
T Consensus 29 g~~v~~~~Yrl~-------p~~-----~~p~~~~D~~~a~~~l~~~~~~~-~~d~~~i~l~G~SAGg~la~~~~~~~~~~ 95 (211)
T PF07859_consen 29 GFVVVSIDYRLA-------PEA-----PFPAALEDVKAAYRWLLKNADKL-GIDPERIVLIGDSAGGHLALSLALRARDR 95 (211)
T ss_dssp TSEEEEEE---T-------TTS-----STTHHHHHHHHHHHHHHHTHHHH-TEEEEEEEEEEETHHHHHHHHHHHHHHHT
T ss_pred cEEEEEeecccc-------ccc-----cccccccccccceeeeccccccc-cccccceEEeecccccchhhhhhhhhhhh
Confidence 356777776632 111 2234455555544432222 2 35567899999999999999999777665
Q ss_pred hhhcCCcceecceeeeccCccCc-ccccchhh--hHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCC
Q 041833 240 NQATGEKAINLKGYMVGNALTDD-YHDYLGLF--QFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGN 316 (427)
Q Consensus 240 ~~~~~~~~inLkGi~ign~~id~-~~~~~~~~--~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~ 316 (427)
. ...++++++..|++|. ......+. .......+++....+.+.+.+..... .. ...
T Consensus 96 ~------~~~~~~~~~~~p~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~~~ 154 (211)
T PF07859_consen 96 G------LPKPKGIILISPWTDLQDFDGPSYDDSNENKDDPFLPAPKIDWFWKLYLPGSD--RD-------------DPL 154 (211)
T ss_dssp T------TCHESEEEEESCHSSTSTSSCHHHHHHHHHSTTSSSBHHHHHHHHHHHHSTGG--TT-------------STT
T ss_pred c------ccchhhhhcccccccchhccccccccccccccccccccccccccccccccccc--cc-------------ccc
Confidence 3 2339999999999876 22222221 11112223444444444333221100 00 001
Q ss_pred cccccc-cccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcC
Q 041833 317 IDQYNR-DLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEV 395 (427)
Q Consensus 317 in~Ydi-~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmv 395 (427)
+++..- ... -+| +.+|+.|+.|..++ .++.+.+.|+-.+. ..++..++|++|.-
T Consensus 155 ~sp~~~~~~~-~~P--p~~i~~g~~D~l~~--~~~~~~~~L~~~gv--------------------~v~~~~~~g~~H~f 209 (211)
T PF07859_consen 155 ASPLNASDLK-GLP--PTLIIHGEDDVLVD--DSLRFAEKLKKAGV--------------------DVELHVYPGMPHGF 209 (211)
T ss_dssp TSGGGSSCCT-TCH--EEEEEEETTSTTHH--HHHHHHHHHHHTT---------------------EEEEEEETTEETTG
T ss_pred cccccccccc-cCC--CeeeeccccccchH--HHHHHHHHHHHCCC--------------------CEEEEEECCCeEEe
Confidence 111100 000 111 46799999998764 56777777753222 35788999999964
Q ss_pred C
Q 041833 396 P 396 (427)
Q Consensus 396 P 396 (427)
.
T Consensus 210 ~ 210 (211)
T PF07859_consen 210 F 210 (211)
T ss_dssp G
T ss_pred e
Confidence 3
No 104
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=95.92 E-value=0.041 Score=55.22 Aligned_cols=230 Identities=19% Similarity=0.257 Sum_probs=106.7
Q ss_pred EEecCCCCeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhh--hhhhcCCeEEcCCCCceeeCCCCccccceEEEEeC
Q 041833 94 VTVNEESGRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYG--EAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDS 171 (427)
Q Consensus 94 ~~v~~~~~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g--~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDq 171 (427)
|......|..++=|+..-.+....-|.||.+||..|.+..... .+...|= -+|.+|.
T Consensus 59 v~f~s~~g~~V~g~l~~P~~~~~~~Pavv~~hGyg~~~~~~~~~~~~a~~G~---------------------~vl~~d~ 117 (320)
T PF05448_consen 59 VSFESFDGSRVYGWLYRPKNAKGKLPAVVQFHGYGGRSGDPFDLLPWAAAGY---------------------AVLAMDV 117 (320)
T ss_dssp EEEEEGGGEEEEEEEEEES-SSSSEEEEEEE--TT--GGGHHHHHHHHHTT----------------------EEEEE--
T ss_pred EEEEccCCCEEEEEEEecCCCCCCcCEEEEecCCCCCCCCcccccccccCCe---------------------EEEEecC
Confidence 3333334567776666554345678999999998777543301 1222232 2344442
Q ss_pred CCCcc-cCcC------CCCCCCccCCh---------HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHH
Q 041833 172 PVGVG-FSYS------NTSSDITTNGD---------KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKA 235 (427)
Q Consensus 172 P~G~G-fSy~------~~~~~~~~~~~---------~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~ 235 (427)
+|.| .|.. ....++...+. .....|.+..+ .|+...|+.-.+++.++|+|-||...-.+|..
T Consensus 118 -rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~rav-d~l~slpevD~~rI~v~G~SqGG~lal~~aaL 195 (320)
T PF05448_consen 118 -RGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAV-DFLRSLPEVDGKRIGVTGGSQGGGLALAAAAL 195 (320)
T ss_dssp -TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHH-HHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred -CCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHH-HHHHhCCCcCcceEEEEeecCchHHHHHHHHh
Confidence 3554 1111 00011111111 12334555543 46678899988899999999999655444442
Q ss_pred HHHhhhhcCCcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcC
Q 041833 236 IIRHNQATGEKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELG 315 (427)
Q Consensus 236 i~~~~~~~~~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g 315 (427)
.-.++.++...|.+...... +.... +...+..+.+-+.... .......++++. .+
T Consensus 196 -----------d~rv~~~~~~vP~l~d~~~~-------~~~~~-~~~~y~~~~~~~~~~d--~~~~~~~~v~~~----L~ 250 (320)
T PF05448_consen 196 -----------DPRVKAAAADVPFLCDFRRA-------LELRA-DEGPYPEIRRYFRWRD--PHHEREPEVFET----LS 250 (320)
T ss_dssp -----------SST-SEEEEESESSSSHHHH-------HHHT---STTTHHHHHHHHHHS--CTHCHHHHHHHH----HH
T ss_pred -----------CccccEEEecCCCccchhhh-------hhcCC-ccccHHHHHHHHhccC--CCcccHHHHHHH----Hh
Confidence 12378888888876543211 11000 0000111111111000 000011111111 11
Q ss_pred Ccccccccccccccc--cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCC
Q 041833 316 NIDQYNRDLLTFLVL--FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGH 393 (427)
Q Consensus 316 ~in~Ydi~~p~~lp~--i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGH 393 (427)
-++.-|+ -+. .++++-.|-.|.+||..++....+.|+-+ + +..+.+..||
T Consensus 251 Y~D~~nf-----A~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~-K----------------------~l~vyp~~~H 302 (320)
T PF05448_consen 251 YFDAVNF-----ARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGP-K----------------------ELVVYPEYGH 302 (320)
T ss_dssp TT-HHHH-----GGG--SEEEEEEETT-SSS-HHHHHHHHCC--SS-E----------------------EEEEETT--S
T ss_pred hhhHHHH-----HHHcCCCEEEEEecCCCCCCchhHHHHHhccCCC-e----------------------eEEeccCcCC
Confidence 1111111 111 34679999999999999999998888643 2 5688999999
Q ss_pred cCCcCC
Q 041833 394 EVPLHR 399 (427)
Q Consensus 394 mvP~dq 399 (427)
-.+.+.
T Consensus 303 e~~~~~ 308 (320)
T PF05448_consen 303 EYGPEF 308 (320)
T ss_dssp STTHHH
T ss_pred CchhhH
Confidence 876554
No 105
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=95.70 E-value=0.045 Score=45.44 Aligned_cols=64 Identities=27% Similarity=0.293 Sum_probs=52.1
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSF 410 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~f 410 (427)
.+.|+++++.|.++|+.+.+...+.|.- -..+++.+.||-+-...-.-+.+++++|
T Consensus 35 ~piL~l~~~~Dp~TP~~~a~~~~~~l~~------------------------s~lvt~~g~gHg~~~~~s~C~~~~v~~y 90 (103)
T PF08386_consen 35 PPILVLGGTHDPVTPYEGARAMAARLPG------------------------SRLVTVDGAGHGVYAGGSPCVDKAVDDY 90 (103)
T ss_pred CCEEEEecCcCCCCcHHHHHHHHHHCCC------------------------ceEEEEeccCcceecCCChHHHHHHHHH
Confidence 5679999999999999999999998853 2679999999999854445567888888
Q ss_pred HcCCCCCC
Q 041833 411 LSGRSMPC 418 (427)
Q Consensus 411 L~g~~l~~ 418 (427)
|..-.+|.
T Consensus 91 l~~G~lP~ 98 (103)
T PF08386_consen 91 LLDGTLPA 98 (103)
T ss_pred HHcCCCCC
Confidence 87666664
No 106
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=95.45 E-value=0.063 Score=55.91 Aligned_cols=92 Identities=16% Similarity=0.144 Sum_probs=57.3
Q ss_pred cceEEEEeCCCCcccCcCCCC-----CCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 163 VANILFLDSPVGVGFSYSNTS-----SDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~-----~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
.|-||++|+ +=-|.|..... -.|. |.+++-.|+..|++.+-.++....+.|++++|-|||| .||..+-
T Consensus 59 ~a~~v~lEH-RyYG~S~P~~~~s~~nL~yL--t~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G----~Laaw~r 131 (434)
T PF05577_consen 59 GALVVALEH-RYYGKSQPFGDLSTENLRYL--TSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGG----ALAAWFR 131 (434)
T ss_dssp TEEEEEE---TTSTTB-TTGGGGGSTTTC---SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHH----HHHHHHH
T ss_pred CCcEEEeeh-hhhcCCCCccccchhhHHhc--CHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchh----HHHHHHH
Confidence 478999997 58898874321 2343 8899999999999988777766677799999999999 5555543
Q ss_pred HhhhhcCCcceecceeeeccCccCcccccc
Q 041833 238 RHNQATGEKAINLKGYMVGNALTDDYHDYL 267 (427)
Q Consensus 238 ~~~~~~~~~~inLkGi~ign~~id~~~~~~ 267 (427)
... +--+.|.+.-.+.+....+..
T Consensus 132 ~ky------P~~~~ga~ASSapv~a~~df~ 155 (434)
T PF05577_consen 132 LKY------PHLFDGAWASSAPVQAKVDFW 155 (434)
T ss_dssp HH-------TTT-SEEEEET--CCHCCTTT
T ss_pred hhC------CCeeEEEEeccceeeeecccH
Confidence 332 333556666555555544433
No 107
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=95.41 E-value=0.67 Score=45.46 Aligned_cols=249 Identities=14% Similarity=0.132 Sum_probs=123.2
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTA 195 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A 195 (427)
+...+|+=+||-||+--=+ --+-|.. =..-..+|=|--| |.|++.......+ +.++-+
T Consensus 33 s~~gTVv~~hGsPGSH~DF----kYi~~~l--------------~~~~iR~I~iN~P-Gf~~t~~~~~~~~---~n~er~ 90 (297)
T PF06342_consen 33 SPLGTVVAFHGSPGSHNDF----KYIRPPL--------------DEAGIRFIGINYP-GFGFTPGYPDQQY---TNEERQ 90 (297)
T ss_pred CCceeEEEecCCCCCccch----hhhhhHH--------------HHcCeEEEEeCCC-CCCCCCCCccccc---ChHHHH
Confidence 4455899999999975332 1111111 0123456777889 9999876554434 334444
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC-ccccc-----chh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD-DYHDY-----LGL 269 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id-~~~~~-----~~~ 269 (427)
. |...+++.- ..+ ..+.+.|||-|+--+-.+|... .+.|+++.||.-- +-... ...
T Consensus 91 ~----~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~------------~~~g~~lin~~G~r~HkgIrp~~r~~~ 152 (297)
T PF06342_consen 91 N----FVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH------------PLHGLVLINPPGLRPHKGIRPLSRMET 152 (297)
T ss_pred H----HHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC------------ccceEEEecCCccccccCcCHHHHHHH
Confidence 4 444444432 343 5799999999996666665521 3779999999732 21111 122
Q ss_pred hhHhhhcccCCHHHHHHH----HHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccC
Q 041833 270 FQFWWSAGLISDDTYKQL----NLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIP 345 (427)
Q Consensus 270 ~~f~~~~glI~~~~~~~l----~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p 345 (427)
..+++.. +.....+.+ .+.-... .....+...++..+....-+...-+|..-.=.| +++||.-|-.|.++-
T Consensus 153 i~~l~~~--lp~~~~~~i~~~~y~~iG~K--V~~GeeA~na~r~m~~~df~~q~~~I~~ln~~~-ikvli~ygg~DhLIE 227 (297)
T PF06342_consen 153 INYLYDL--LPRFIINAIMYFYYRMIGFK--VSDGEEAINAMRSMQNCDFEEQKEYIDKLNKKP-IKVLIAYGGKDHLIE 227 (297)
T ss_pred HHHHHHH--hhHHHHHHHHHHHHHHhCee--ecChHHHHHHHHHHHhcCHHHHHHHHHHhccCC-CcEEEEEcCcchhhH
Confidence 2333331 222222211 1111110 011223333333222110000000000000013 678888888898887
Q ss_pred hhhHHHHHHhcCCCCCccceeeee--CCceeeeeeee---cCeEEEEECCCCCcCCcCCcHHHHHHHHHHH
Q 041833 346 VTSTRYSIDALNLPTVKPWRAWYD--EGQVGGWTQEY---SGLTFVTVRGAGHEVPLHRPKPALTLIKSFL 411 (427)
Q Consensus 346 ~~gt~~~i~~L~~~~~~~~~~w~~--~~~v~Gy~k~y---~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL 411 (427)
-.-.++.+.... +...+.--.. +.+.--..+++ ..-.-|.|..-||+..-.||+-.-+++...+
T Consensus 228 eeI~~E~a~~f~--~l~Hf~~~~~~seee~~kI~~~f~~~~~~~sv~f~~dgHf~qK~~A~lIA~~i~~mf 296 (297)
T PF06342_consen 228 EEISFEFAMKFK--GLDHFNIEKEISEEEKPKILKSFASGQKGASVFFAKDGHFQQKFRADLIAEAIKKMF 296 (297)
T ss_pred HHHHHHHHHHhC--CccceeeecCCChhHHHHHHHHHhcCCceeEEEEecCChHHhHHHHHHHHHHHHHhh
Confidence 777777665442 1111110000 00000001111 1233467888899999999998888887655
No 108
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=95.29 E-value=0.11 Score=47.96 Aligned_cols=43 Identities=23% Similarity=0.393 Sum_probs=32.6
Q ss_pred CCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccccc
Q 041833 211 QFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDY 266 (427)
Q Consensus 211 ~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~ 266 (427)
++....+.|+|.|.||.|+-.||.+. +++. ++.||.+.|....
T Consensus 55 ~~~~~~~~liGSSlGG~~A~~La~~~------------~~~a-vLiNPav~p~~~l 97 (187)
T PF05728_consen 55 ELKPENVVLIGSSLGGFYATYLAERY------------GLPA-VLINPAVRPYELL 97 (187)
T ss_pred hCCCCCeEEEEEChHHHHHHHHHHHh------------CCCE-EEEcCCCCHHHHH
Confidence 34555699999999998888887743 3555 7889999987643
No 109
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=95.15 E-value=0.11 Score=47.96 Aligned_cols=141 Identities=21% Similarity=0.232 Sum_probs=86.5
Q ss_pred EEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCc
Q 041833 167 LFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEK 246 (427)
Q Consensus 167 lfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~ 246 (427)
|-++- +|+|.|.+.-..+. ++.+.|....++++ .+||+-. -+-|.|-|+|+-++..+|.+..+.
T Consensus 64 lRfNf-RgVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e~------- 127 (210)
T COG2945 64 LRFNF-RGVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPEI------- 127 (210)
T ss_pred Eeecc-cccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhcccc-------
Confidence 33443 69999998765554 55666666666665 4676543 268999999997777777654332
Q ss_pred ceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccc
Q 041833 247 AINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLT 326 (427)
Q Consensus 247 ~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~ 326 (427)
.+.+...|.+. .++|.+-
T Consensus 128 ----~~~is~~p~~~-------~~dfs~l--------------------------------------------------- 145 (210)
T COG2945 128 ----LVFISILPPIN-------AYDFSFL--------------------------------------------------- 145 (210)
T ss_pred ----cceeeccCCCC-------chhhhhc---------------------------------------------------
Confidence 22233333322 1222211
Q ss_pred ccc-ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHH
Q 041833 327 FLV-LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALT 405 (427)
Q Consensus 327 ~lp-~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~ 405 (427)
.| -...++++|+.|-++...-..+|.+.. .++.+++.+|.|+-.-.-.+ ..+
T Consensus 146 -~P~P~~~lvi~g~~Ddvv~l~~~l~~~~~~-------------------------~~~~i~i~~a~HFF~gKl~~-l~~ 198 (210)
T COG2945 146 -APCPSPGLVIQGDADDVVDLVAVLKWQESI-------------------------KITVITIPGADHFFHGKLIE-LRD 198 (210)
T ss_pred -cCCCCCceeEecChhhhhcHHHHHHhhcCC-------------------------CCceEEecCCCceecccHHH-HHH
Confidence 11 134689999999777666555555432 34789999999998766554 456
Q ss_pred HHHHHHc
Q 041833 406 LIKSFLS 412 (427)
Q Consensus 406 mi~~fL~ 412 (427)
.+.+||.
T Consensus 199 ~i~~~l~ 205 (210)
T COG2945 199 TIADFLE 205 (210)
T ss_pred HHHHHhh
Confidence 6666764
No 110
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=94.94 E-value=0.084 Score=58.76 Aligned_cols=99 Identities=18% Similarity=0.191 Sum_probs=62.6
Q ss_pred CCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCC---------CCC--C
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSN---------TSS--D 185 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~---------~~~--~ 185 (427)
..|+|+++||=.|....+ -.+.+ .+. .+-+.+|-+|.| |+|.|... ... .
T Consensus 448 g~P~VVllHG~~g~~~~~-~~lA~-----------~La------~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~ 508 (792)
T TIGR03502 448 GWPVVIYQHGITGAKENA-LAFAG-----------TLA------AAGVATIAIDHP-LHGARSFDANASGVNATNANVLA 508 (792)
T ss_pred CCcEEEEeCCCCCCHHHH-HHHHH-----------HHH------hCCcEEEEeCCC-CCCccccccccccccccccCccc
Confidence 358999999977766654 22222 111 023578999998 99999322 111 1
Q ss_pred Cc--------cCChHHHHHHHHHHHHHHH------H---HccCCCCCCeEEecCCcCccchHHHHH
Q 041833 186 IT--------TNGDKRTAEDSLKFLLKWL------E---RFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 186 ~~--------~~~~~~~A~d~~~fL~~f~------~---~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
|- ..+..+.+.|+..+....- . .+..+...+++++|||+||..+..++.
T Consensus 509 y~Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~ 574 (792)
T TIGR03502 509 YMNLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIA 574 (792)
T ss_pred eeccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHH
Confidence 21 0256788888887554332 1 122355679999999999988887775
No 111
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=94.69 E-value=0.08 Score=48.19 Aligned_cols=43 Identities=19% Similarity=0.320 Sum_probs=34.7
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcC
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLH 398 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~d 398 (427)
++.+++..+.|..||+.-++++.+.|+ ..++.+.++||+...+
T Consensus 115 ~~~~viaS~nDp~vp~~~a~~~A~~l~-------------------------a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 115 FPSIVIASDNDPYVPFERAQRLAQRLG-------------------------AELIILGGGGHFNAAS 157 (171)
T ss_dssp CCEEEEEETTBSSS-HHHHHHHHHHHT--------------------------EEEEETS-TTSSGGG
T ss_pred CCeEEEEcCCCCccCHHHHHHHHHHcC-------------------------CCeEECCCCCCccccc
Confidence 345899999999999999999999885 3689999999997753
No 112
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=94.56 E-value=0.44 Score=45.28 Aligned_cols=122 Identities=17% Similarity=0.155 Sum_probs=62.6
Q ss_pred CCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHH
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAE 196 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~ 196 (427)
+...||+++|--|.......+-.+. .. .. ....+....++.-+|-. .-+|.... ....+.++
T Consensus 3 ~g~pVlFIhG~~Gs~~q~rsl~~~~-----~~---~~--~~~~~~~~~d~ft~df~--~~~s~~~g------~~l~~q~~ 64 (225)
T PF07819_consen 3 SGIPVLFIHGNAGSYKQVRSLASEL-----QR---KA--LLNDNSSHFDFFTVDFN--EELSAFHG------RTLQRQAE 64 (225)
T ss_pred CCCEEEEECcCCCCHhHHHHHHHHH-----hh---hh--hhccCccceeEEEeccC--cccccccc------ccHHHHHH
Confidence 4567899999888776541222222 00 00 01112233556666643 11121111 13445566
Q ss_pred HHHHHHHHHHHHc--cCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceee-eccCccCcc
Q 041833 197 DSLKFLLKWLERF--SQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM-VGNALTDDY 263 (427)
Q Consensus 197 d~~~fL~~f~~~f--p~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~-ign~~id~~ 263 (427)
.+.+.++..++.. ..-..+++.|+|||+||. +|+..+.... ...-++++++ ++.|...+.
T Consensus 65 ~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGl----var~~l~~~~---~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 65 FLAEAIKYILELYKSNRPPPRSVILVGHSMGGL----VARSALSLPN---YDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHhhhhccCCCCceEEEEEchhhH----HHHHHHhccc---cccccEEEEEEEcCCCCCcc
Confidence 6666666666543 223567899999999994 3443333221 1123466665 566665554
No 113
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=94.38 E-value=0.01 Score=55.88 Aligned_cols=47 Identities=15% Similarity=0.266 Sum_probs=33.2
Q ss_pred HHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 203 LKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 203 ~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
.+|++.+|+...+++-|.|-|.||-++..+|... + .++.++..+|..
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~----------~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRF----------P-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHS----------S-SEEEEEEES--S
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcC----------C-CccEEEEeCCce
Confidence 3578899999989999999999997666666643 2 577777777753
No 114
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=94.00 E-value=3.7 Score=41.23 Aligned_cols=124 Identities=23% Similarity=0.253 Sum_probs=71.5
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhh--hhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAY--GEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS 178 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~--g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfS 178 (427)
+--.+.|... . .....|+++-+||==|.|.--| |+.-+ +.. +-..+|-++- +|.+.+
T Consensus 60 ~~~~ldw~~~-p-~~~~~P~vVl~HGL~G~s~s~y~r~L~~~------------~~~------rg~~~Vv~~~-Rgcs~~ 118 (345)
T COG0429 60 GFIDLDWSED-P-RAAKKPLVVLFHGLEGSSNSPYARGLMRA------------LSR------RGWLVVVFHF-RGCSGE 118 (345)
T ss_pred CEEEEeeccC-c-cccCCceEEEEeccCCCCcCHHHHHHHHH------------HHh------cCCeEEEEec-ccccCC
Confidence 3445666442 1 2355699999999655553321 21111 111 1245666775 599988
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
--..+.-|. .+.. +|+..+|....++ +..++||.+|-|.||. .||..+.+..+ ......++++-+|
T Consensus 119 ~n~~p~~yh-~G~t---~D~~~~l~~l~~~---~~~r~~~avG~SLGgn---mLa~ylgeeg~----d~~~~aa~~vs~P 184 (345)
T COG0429 119 ANTSPRLYH-SGET---EDIRFFLDWLKAR---FPPRPLYAVGFSLGGN---MLANYLGEEGD----DLPLDAAVAVSAP 184 (345)
T ss_pred cccCcceec-ccch---hHHHHHHHHHHHh---CCCCceEEEEecccHH---HHHHHHHhhcc----CcccceeeeeeCH
Confidence 765554332 2443 5555555433334 4468999999999994 45666555432 2333777888777
Q ss_pred c
Q 041833 259 L 259 (427)
Q Consensus 259 ~ 259 (427)
+
T Consensus 185 ~ 185 (345)
T COG0429 185 F 185 (345)
T ss_pred H
Confidence 6
No 115
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=93.99 E-value=0.32 Score=57.40 Aligned_cols=103 Identities=13% Similarity=0.096 Sum_probs=68.4
Q ss_pred CCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHH
Q 041833 118 KPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAED 197 (427)
Q Consensus 118 ~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d 197 (427)
.|.++.+||+.|.+..+ ..+.+. ..+...++-+|.| |.|.+.. .. .+.++.|++
T Consensus 1068 ~~~l~~lh~~~g~~~~~-~~l~~~------------------l~~~~~v~~~~~~-g~~~~~~---~~---~~l~~la~~ 1121 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQF-SVLSRY------------------LDPQWSIYGIQSP-RPDGPMQ---TA---TSLDEVCEA 1121 (1296)
T ss_pred CCCeEEecCCCCchHHH-HHHHHh------------------cCCCCcEEEEECC-CCCCCCC---CC---CCHHHHHHH
Confidence 46789999998877765 333220 0134677888988 8775421 11 277888888
Q ss_pred HHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 198 SLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 198 ~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
+.+.++.. ....+++|+|+|+||..+-.+|.++.++ ...+..+++.++.
T Consensus 1122 ~~~~i~~~------~~~~p~~l~G~S~Gg~vA~e~A~~l~~~-------~~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1122 HLATLLEQ------QPHGPYHLLGYSLGGTLAQGIAARLRAR-------GEEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHHHhh------CCCCCEEEEEechhhHHHHHHHHHHHHc-------CCceeEEEEecCC
Confidence 88777642 1235899999999998888888876543 2345566665543
No 116
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=93.69 E-value=1.3 Score=47.92 Aligned_cols=205 Identities=20% Similarity=0.227 Sum_probs=117.4
Q ss_pred eEEEEEEeecc--CC-CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcccc----------ceEEEE
Q 041833 103 ALFYWFVEAVE--DP-DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQV----------ANILFL 169 (427)
Q Consensus 103 ~lFy~f~es~~--~p-~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~----------anvlfi 169 (427)
-+.|-.+-..+ +| ..-|++|.+-||||. .++.|.+.|.+. .-|++|
T Consensus 624 ~~lYgmiyKPhn~~pgkkYptvl~VYGGP~V---------------------QlVnnsfkgi~ylR~~~LaslGy~Vv~I 682 (867)
T KOG2281|consen 624 LTLYGMIYKPHNFQPGKKYPTVLNVYGGPGV---------------------QLVNNSFKGIQYLRFCRLASLGYVVVFI 682 (867)
T ss_pred cEEEEEEEccccCCCCCCCceEEEEcCCCce---------------------EEeeccccceehhhhhhhhhcceEEEEE
Confidence 45566555443 33 457999999999973 466788888864 346899
Q ss_pred eCCCCccc---CcCCC-CCCCccCChHHHHHHHHHHHHHHHHHccCCC-CCCeEEecCCcCccchHHHHHHHHHhhhhcC
Q 041833 170 DSPVGVGF---SYSNT-SSDITTNGDKRTAEDSLKFLLKWLERFSQFK-GRDFYISGESYGGHYVPQLSKAIIRHNQATG 244 (427)
Q Consensus 170 DqP~G~Gf---Sy~~~-~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~-~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~ 244 (427)
|.. |+-. -+-.. .... +..+ ++|-++-||-..++.- |. -..+-|-|-|||| +|+...+-+.
T Consensus 683 DnR-GS~hRGlkFE~~ik~km---GqVE-~eDQVeglq~Laeq~g-fidmdrV~vhGWSYGG----YLSlm~L~~~---- 748 (867)
T KOG2281|consen 683 DNR-GSAHRGLKFESHIKKKM---GQVE-VEDQVEGLQMLAEQTG-FIDMDRVGVHGWSYGG----YLSLMGLAQY---- 748 (867)
T ss_pred cCC-CccccchhhHHHHhhcc---Ceee-ehhhHHHHHHHHHhcC-cccchheeEecccccc----HHHHHHhhcC----
Confidence 974 6532 11100 0001 1111 2333344543333321 32 2359999999999 7777666553
Q ss_pred CcceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccc
Q 041833 245 EKAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDL 324 (427)
Q Consensus 245 ~~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~ 324 (427)
+--++.-+.|.|+++...--..|.+.+..+.-.++..|.+ . .....+.+
T Consensus 749 --P~IfrvAIAGapVT~W~~YDTgYTERYMg~P~~nE~gY~a-------------g----SV~~~Vek------------ 797 (867)
T KOG2281|consen 749 --PNIFRVAIAGAPVTDWRLYDTGYTERYMGYPDNNEHGYGA-------------G----SVAGHVEK------------ 797 (867)
T ss_pred --cceeeEEeccCcceeeeeecccchhhhcCCCccchhcccc-------------h----hHHHHHhh------------
Confidence 3336777778898887643333333332222112222110 0 01111111
Q ss_pred cccccc--cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCC
Q 041833 325 LTFLVL--FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVP 396 (427)
Q Consensus 325 p~~lp~--i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP 396 (427)
+|- =|-|+++|-.|--|-+..|...++.|.=.++ .-...++++--|++-
T Consensus 798 ---lpdepnRLlLvHGliDENVHF~Hts~Lvs~lvkagK--------------------pyeL~IfP~ERHsiR 848 (867)
T KOG2281|consen 798 ---LPDEPNRLLLVHGLIDENVHFAHTSRLVSALVKAGK--------------------PYELQIFPNERHSIR 848 (867)
T ss_pred ---CCCCCceEEEEecccccchhhhhHHHHHHHHHhCCC--------------------ceEEEEccccccccC
Confidence 111 1346999999999999999999998864443 235688999999875
No 117
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=93.48 E-value=0.18 Score=52.87 Aligned_cols=56 Identities=21% Similarity=0.235 Sum_probs=37.9
Q ss_pred eCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHH
Q 041833 170 DSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKA 235 (427)
Q Consensus 170 DqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~ 235 (427)
|.+ |.||+.... ...++..+++.+.+++.++. ...++++|+|||+||.++-.++..
T Consensus 127 dL~-g~gYDwR~~------~~~~~~~~~Lk~lIe~~~~~---~g~~kV~LVGHSMGGlva~~fl~~ 182 (440)
T PLN02733 127 TLF-GFGYDFRQS------NRLPETMDGLKKKLETVYKA---SGGKKVNIISHSMGGLLVKCFMSL 182 (440)
T ss_pred Ccc-cCCCCcccc------ccHHHHHHHHHHHHHHHHHH---cCCCCEEEEEECHhHHHHHHHHHH
Confidence 443 777765331 12355677888888877765 456799999999999776665543
No 118
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=93.35 E-value=0.1 Score=44.86 Aligned_cols=63 Identities=21% Similarity=0.353 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
...+.+.+.|++..+..| ..++.|+|||.||..+..+|..+.++.. ....+++-+..+.|-+.
T Consensus 45 ~~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~---~~~~~~~~~~fg~P~~~ 107 (140)
T PF01764_consen 45 SLYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGP---SSSSNVKCYTFGAPRVG 107 (140)
T ss_dssp HHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTT---TSTTTEEEEEES-S--B
T ss_pred HHHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhccc---ccccceeeeecCCcccc
Confidence 344566666777666655 4689999999999988888888877643 22467788888888764
No 119
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=93.34 E-value=0.12 Score=48.20 Aligned_cols=72 Identities=17% Similarity=0.119 Sum_probs=48.6
Q ss_pred CcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceeccee
Q 041833 174 GVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGY 253 (427)
Q Consensus 174 G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi 253 (427)
-+||-+++.. .+.+++..++.++++--|+.+|.-+ .+.+.|||-|.|.+.....++. ...+.|+
T Consensus 102 svgY~l~~q~-----htL~qt~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r---------~prI~gl 165 (270)
T KOG4627|consen 102 SVGYNLCPQV-----HTLEQTMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQR---------SPRIWGL 165 (270)
T ss_pred EeccCcCccc-----ccHHHHHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhc---------CchHHHH
Confidence 3555554432 2788999999998887777776543 4999999999976665555431 2346677
Q ss_pred eeccCccC
Q 041833 254 MVGNALTD 261 (427)
Q Consensus 254 ~ign~~id 261 (427)
++..|+-+
T Consensus 166 ~l~~GvY~ 173 (270)
T KOG4627|consen 166 ILLCGVYD 173 (270)
T ss_pred HHHhhHhh
Confidence 77666644
No 120
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.31 E-value=0.22 Score=47.85 Aligned_cols=115 Identities=23% Similarity=0.396 Sum_probs=62.0
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCC----CccccceEEEEeCCCCcccCcCCCCCCCccCCh
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPY----SWNQVANILFLDSPVGVGFSYSNTSSDITTNGD 191 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~----sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~ 191 (427)
.++|+++|+-|-||-+.. .+|.|= .|..|-- -|+ ..++=-.+.|.-.=-+-..+..+. .+.
T Consensus 27 ~~~~li~~IpGNPG~~gF----Y~~F~~--------~L~~~l~~r~~~wt-Ish~~H~~~P~sl~~~~s~~~~ei--fsL 91 (301)
T KOG3975|consen 27 EDKPLIVWIPGNPGLLGF----YTEFAR--------HLHLNLIDRLPVWT-ISHAGHALMPASLREDHSHTNEEI--FSL 91 (301)
T ss_pred CCceEEEEecCCCCchhH----HHHHHH--------HHHHhcccccceeE-EeccccccCCcccccccccccccc--cch
Confidence 789999999999997754 455442 1111110 222 011111222311111111111122 256
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
++..+.=.+|+++++ -+++++||.|||-|. ++..+|+..++ ...+++-..+.=|
T Consensus 92 ~~QV~HKlaFik~~~-----Pk~~ki~iiGHSiGa----Ym~Lqil~~~k----~~~~vqKa~~LFP 145 (301)
T KOG3975|consen 92 QDQVDHKLAFIKEYV-----PKDRKIYIIGHSIGA----YMVLQILPSIK----LVFSVQKAVLLFP 145 (301)
T ss_pred hhHHHHHHHHHHHhC-----CCCCEEEEEecchhH----HHHHHHhhhcc----cccceEEEEEecc
Confidence 667777778888764 357899999999987 77777777542 3444444444333
No 121
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=93.27 E-value=3.2 Score=39.73 Aligned_cols=232 Identities=14% Similarity=0.119 Sum_probs=118.4
Q ss_pred CceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHH
Q 041833 119 PLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDS 198 (427)
Q Consensus 119 Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~ 198 (427)
+=.|.+-|++|.....|--|.+.- | ..-+.||-.|- +|.|-|..+..+.....=.+=+-.|+
T Consensus 30 ~g~~~va~a~Gv~~~fYRrfA~~a-------------~----~~Gf~Vlt~dy-RG~g~S~p~~~~~~~~~~~DwA~~D~ 91 (281)
T COG4757 30 SGRLVVAGATGVGQYFYRRFAAAA-------------A----KAGFEVLTFDY-RGIGQSRPASLSGSQWRYLDWARLDF 91 (281)
T ss_pred CCcEEecccCCcchhHhHHHHHHh-------------h----ccCceEEEEec-ccccCCCccccccCccchhhhhhcch
Confidence 334456678888777644333310 1 13467888997 59999986654433221122233555
Q ss_pred HHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh---c--------CCcceecceeeeccCccCcccccc
Q 041833 199 LKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA---T--------GEKAINLKGYMVGNALTDDYHDYL 267 (427)
Q Consensus 199 ~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~---~--------~~~~inLkGi~ign~~id~~~~~~ 267 (427)
-..|..--+. ....|.|.+||||||+..--+++.= +.+.. + -.....++.+.+.|-...+..-..
T Consensus 92 ~aal~~~~~~---~~~~P~y~vgHS~GGqa~gL~~~~~-k~~a~~vfG~gagwsg~m~~~~~l~~~~l~~lv~p~lt~w~ 167 (281)
T COG4757 92 PAALAALKKA---LPGHPLYFVGHSFGGQALGLLGQHP-KYAAFAVFGSGAGWSGWMGLRERLGAVLLWNLVGPPLTFWK 167 (281)
T ss_pred HHHHHHHHhh---CCCCceEEeeccccceeecccccCc-ccceeeEeccccccccchhhhhcccceeeccccccchhhcc
Confidence 5555433232 3567999999999998764444321 00000 0 011223444444444433332222
Q ss_pred h-hhhHhhhcc-cCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEEeCCCCcccC
Q 041833 268 G-LFQFWWSAG-LISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYDSGDTDAVIP 345 (427)
Q Consensus 268 ~-~~~f~~~~g-lI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy~Gd~D~i~p 345 (427)
. +..-+...| -+.-..+....+-|....+......-....+.+-. ++ +..+...-+.|.-||
T Consensus 168 g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~fddp~~~~~~q~yaa---------Vr-------tPi~~~~~~DD~w~P 231 (281)
T COG4757 168 GYMPKDLLGLGSDLPGTVMRDWARWCRHPRYYFDDPAMRNYRQVYAA---------VR-------TPITFSRALDDPWAP 231 (281)
T ss_pred ccCcHhhcCCCccCcchHHHHHHHHhcCccccccChhHhHHHHHHHH---------hc-------CceeeeccCCCCcCC
Confidence 2 223333444 34555677777778775432222222222222111 11 224455667788899
Q ss_pred hhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCC----CCcCCcCCc-HHHHHHHHHH
Q 041833 346 VTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGA----GHEVPLHRP-KPALTLIKSF 410 (427)
Q Consensus 346 ~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gA----GHmvP~dqP-e~~~~mi~~f 410 (427)
....+.+++--.-. .|+...+..+ |||-=.-+| |...+.+..|
T Consensus 232 ~As~d~f~~~y~nA----------------------pl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w 279 (281)
T COG4757 232 PASRDAFASFYRNA----------------------PLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGW 279 (281)
T ss_pred HHHHHHHHHhhhcC----------------------cccceecCcccCcccchhhhccchHHHHHHHHHh
Confidence 88887776522100 1334444444 999888887 5544444444
No 122
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=93.05 E-value=0.058 Score=50.62 Aligned_cols=187 Identities=19% Similarity=0.237 Sum_probs=81.9
Q ss_pred CCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccc-cceEEEEeCCCCc----ccCcC---------CC
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQ-VANILFLDSPVGV----GFSYS---------NT 182 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~-~anvlfiDqP~G~----GfSy~---------~~ 182 (427)
++|-||.|||. |.|+.+ +-..+++++- ...+ .+.++|+|-|.-+ |.... ..
T Consensus 3 ~k~riLcLHG~-~~na~i--f~~q~~~l~~------------~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~ 67 (212)
T PF03959_consen 3 RKPRILCLHGY-GQNAEI--FRQQTSALRK------------ALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDP 67 (212)
T ss_dssp ---EEEEE--T-T--HHH--HHHHTHHHHH------------HHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHT
T ss_pred CCceEEEeCCC-CcCHHH--HHHHHHHHHH------------HHhhCcEEEEEecCCcccCCcccccccccccccccCCC
Confidence 57889999988 444443 3334455441 1123 6788999987555 22210 00
Q ss_pred C--CCCcc----CChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeec
Q 041833 183 S--SDITT----NGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVG 256 (427)
Q Consensus 183 ~--~~~~~----~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ig 256 (427)
. ..+.. .......++..+.|.++++...-| .-|+|.|=|+..+..|+......... .....+|-+++.
T Consensus 68 ~~~~~W~~~~~~~~~~~~~~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~--~~~~~~kf~V~~ 141 (212)
T PF03959_consen 68 GPFYSWWDPDDDDHEYEGLDESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPD--GAHPPFKFAVFI 141 (212)
T ss_dssp T--EESS---S-SGGG---HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST----T----SEEEEE
T ss_pred CcceeeeecCCCcccccCHHHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhccc--ccCCCceEEEEE
Confidence 0 00000 011233455555666666553222 34999999997776666544433210 135567877777
Q ss_pred cCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCcccccccccccccccceeEE
Q 041833 257 NALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLLTFLVLFDFLYD 336 (427)
Q Consensus 257 n~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i~~Liy 336 (427)
++..-........+ ....| .++.|.+
T Consensus 142 sg~~p~~~~~~~~~-----------------------------------------------~~~~i-------~iPtlHv 167 (212)
T PF03959_consen 142 SGFPPPDPDYQELY-----------------------------------------------DEPKI-------SIPTLHV 167 (212)
T ss_dssp S----EEE-GTTTT-------------------------------------------------TT----------EEEEE
T ss_pred cccCCCchhhhhhh-----------------------------------------------ccccC-------CCCeEEE
Confidence 77654332200000 00001 2457888
Q ss_pred eCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHH
Q 041833 337 SGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKP 402 (427)
Q Consensus 337 ~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~ 402 (427)
.|..|.+++...++...+...- . .-+.....||.+|...++.
T Consensus 168 ~G~~D~~~~~~~s~~L~~~~~~-----------------------~-~~v~~h~gGH~vP~~~~~~ 209 (212)
T PF03959_consen 168 IGENDPVVPPERSEALAEMFDP-----------------------D-ARVIEHDGGHHVPRKKEDV 209 (212)
T ss_dssp EETT-SSS-HHHHHHHHHHHHH-----------------------H-EEEEEESSSSS----HHHH
T ss_pred EeCCCCCcchHHHHHHHHhccC-----------------------C-cEEEEECCCCcCcCChhhc
Confidence 8999999998877777664421 0 3466778899999987653
No 123
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=93.01 E-value=1.2 Score=43.12 Aligned_cols=64 Identities=28% Similarity=0.305 Sum_probs=40.3
Q ss_pred ccceeEEeCC------CCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECC--CCCcCCcCCcH
Q 041833 330 LFDFLYDSGD------TDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRG--AGHEVPLHRPK 401 (427)
Q Consensus 330 ~i~~Liy~Gd------~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~g--AGHmvP~dqPe 401 (427)
.+++|-+.|+ -|.+||..+++..-.-++-.. + ..+-.+|.| |.|.--++.|+
T Consensus 184 ~i~VLnI~G~~~~g~~sDG~V~~~Ss~sl~~L~~~~~-----------------~---~Y~e~~v~G~~a~HS~LheN~~ 243 (255)
T PF06028_consen 184 NIQVLNIYGDLEDGSNSDGIVPNASSLSLRYLLKNRA-----------------K---SYQEKTVTGKDAQHSQLHENPQ 243 (255)
T ss_dssp T-EEEEEEEESBTTCSBTSSSBHHHHCTHHHHCTTTS-----------------S---EEEEEEEESGGGSCCGGGCCHH
T ss_pred CeEEEEEecccCCCCCCCeEEeHHHHHHHHHHhhccc-----------------C---ceEEEEEECCCCccccCCCCHH
Confidence 4566766776 799999987765433332111 1 224466655 69998888875
Q ss_pred HHHHHHHHHHcCC
Q 041833 402 PALTLIKSFLSGR 414 (427)
Q Consensus 402 ~~~~mi~~fL~g~ 414 (427)
+..+|.+||-++
T Consensus 244 -V~~~I~~FLw~k 255 (255)
T PF06028_consen 244 -VDKLIIQFLWGK 255 (255)
T ss_dssp -HHHHHHHHHCT-
T ss_pred -HHHHHHHHhcCC
Confidence 568888898653
No 124
>COG4099 Predicted peptidase [General function prediction only]
Probab=92.78 E-value=0.95 Score=44.68 Aligned_cols=31 Identities=23% Similarity=0.276 Sum_probs=22.9
Q ss_pred HHHccCCCCCCeEEecCCcCccchHHHHHHH
Q 041833 206 LERFSQFKGRDFYISGESYGGHYVPQLSKAI 236 (427)
Q Consensus 206 ~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i 236 (427)
+..++..-.+++|++|-|.||.-.-+++.+.
T Consensus 260 las~ynID~sRIYviGlSrG~~gt~al~~kf 290 (387)
T COG4099 260 LASTYNIDRSRIYVIGLSRGGFGTWALAEKF 290 (387)
T ss_pred HhhccCcccceEEEEeecCcchhhHHHHHhC
Confidence 3455566677899999999997666666543
No 125
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=92.28 E-value=0.29 Score=51.62 Aligned_cols=38 Identities=29% Similarity=0.274 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHH
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
...++++++-...|. -..+++.|+|+|.||+.+-.++.
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~~ 195 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLLL 195 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHhh
Confidence 334455555444442 34557999999999976655443
No 126
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=92.19 E-value=0.24 Score=46.67 Aligned_cols=59 Identities=17% Similarity=0.289 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
+++...+++..+++| +.+++++|||.||..+-.+|..+.++. ...+++.+..|.|.+..
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~-----~~~~i~~~tFg~P~vg~ 170 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRG-----PGSDVTVYTFGQPRVGN 170 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhC-----CCCceEEEEeCCCCCCC
Confidence 344444555555544 458999999999988877777776543 24568888888888753
No 127
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.86 E-value=0.31 Score=42.88 Aligned_cols=60 Identities=17% Similarity=0.198 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
...+.+...+++....+| ..+++|+|||.||..+-.+|..+.++.. .-.++-+.++.|-+
T Consensus 9 ~~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~-----~~~~~~~~fg~p~~ 68 (153)
T cd00741 9 SLANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGL-----GRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccC-----CCceEEEEeCCCcc
Confidence 344445555555444444 5589999999999988888887765421 22244445555544
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=91.48 E-value=0.2 Score=48.59 Aligned_cols=84 Identities=19% Similarity=0.232 Sum_probs=56.9
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
=+.+|.+|. +|+|-|.+.-.. ...+.++|.++ +.+|+...|-- +-++-++|.||+|......|.
T Consensus 57 GY~vV~~D~-RG~g~S~G~~~~-----~~~~e~~D~~d-~I~W~~~Qpws-~G~VGm~G~SY~G~~q~~~A~-------- 120 (272)
T PF02129_consen 57 GYAVVVQDV-RGTGGSEGEFDP-----MSPNEAQDGYD-TIEWIAAQPWS-NGKVGMYGISYGGFTQWAAAA-------- 120 (272)
T ss_dssp T-EEEEEE--TTSTTS-S-B-T-----TSHHHHHHHHH-HHHHHHHCTTE-EEEEEEEEETHHHHHHHHHHT--------
T ss_pred CCEEEEECC-cccccCCCcccc-----CChhHHHHHHH-HHHHHHhCCCC-CCeEEeeccCHHHHHHHHHHh--------
Confidence 478999996 699999876432 25667788888 44588776543 447999999999977666655
Q ss_pred cCCcceecceeeeccCccCccc
Q 041833 243 TGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~~~ 264 (427)
..+-.||.|+..-+..|...
T Consensus 121 --~~~p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 121 --RRPPHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp --TT-TTEEEEEEESE-SBTCC
T ss_pred --cCCCCceEEEecccCCcccc
Confidence 22556999998888777654
No 129
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=91.25 E-value=0.72 Score=42.89 Aligned_cols=43 Identities=26% Similarity=0.320 Sum_probs=30.0
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCc
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHE 394 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHm 394 (427)
+.|+..|+.|..++....+...+.|.-.+. .+++.+++|++|-
T Consensus 147 P~l~~~g~~D~~~~~~~~~~~~~~l~~~~~--------------------~~~~~~y~ga~Hg 189 (218)
T PF01738_consen 147 PVLILFGENDPFFPPEEVEALEEALKAAGV--------------------DVEVHVYPGAGHG 189 (218)
T ss_dssp -EEEEEETT-TTS-HHHHHHHHHHHHCTTT--------------------TEEEEEETT--TT
T ss_pred CEeecCccCCCCCChHHHHHHHHHHHhcCC--------------------cEEEEECCCCccc
Confidence 478999999999999988888888743222 3578899999996
No 130
>PLN02454 triacylglycerol lipase
Probab=91.10 E-value=0.42 Score=49.41 Aligned_cols=68 Identities=16% Similarity=0.255 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
..+.+++...|++..+.+|..+ ..++|+|||.||..+-..|..|...... ...+++..+..|.|-+..
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~--~~~~~V~~~TFGsPRVGN 273 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVS--GADIPVTAIVFGSPQVGN 273 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhccc--ccCCceEEEEeCCCcccC
Confidence 4677889999999888877653 2599999999998777777666654211 124567778889888765
No 131
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=91.10 E-value=0.045 Score=55.17 Aligned_cols=104 Identities=19% Similarity=0.257 Sum_probs=56.7
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-ccceEEEEeCCCCcccCcCCCCCCCccCChHHH
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-QVANILFLDSPVGVGFSYSNTSSDITTNGDKRT 194 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~ 194 (427)
.++|++|.+||=-+..+.. ..+.+ +..+-..-. ...|||.||--.++...|... . .+...+
T Consensus 69 ~~~pt~iiiHGw~~~~~~~-~~~~~------------~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a----~-~n~~~v 130 (331)
T PF00151_consen 69 PSKPTVIIIHGWTGSGSSE-SWIQD------------MIKALLQKDTGDYNVIVVDWSRGASNNYPQA----V-ANTRLV 130 (331)
T ss_dssp TTSEEEEEE--TT-TT-TT-THHHH------------HHHHHHCC--S-EEEEEEE-HHHHSS-HHHH----H-HHHHHH
T ss_pred CCCCeEEEEcCcCCcccch-hHHHH------------HHHHHHhhccCCceEEEEcchhhccccccch----h-hhHHHH
Confidence 5789999999944333111 01111 111111111 357999999755554433221 1 145566
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHH
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR 238 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~ 238 (427)
++.+..||+...... .+...+++|+|||.|+|.+-..++++..
T Consensus 131 g~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 131 GRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 777777777665333 3556789999999999988888877654
No 132
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=90.89 E-value=1.1 Score=35.39 Aligned_cols=79 Identities=23% Similarity=0.243 Sum_probs=50.0
Q ss_pred CeeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 101 GRALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 101 ~~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
|.+||+..++.+.. .+.+|+.+||--..|.. |..+.+ .. .. +-.+|+-+|++ |+|.|.+
T Consensus 1 G~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~a~---~L--------~~------~G~~V~~~D~r-GhG~S~g 59 (79)
T PF12146_consen 1 GTKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHLAE---FL--------AE------QGYAVFAYDHR-GHGRSEG 59 (79)
T ss_pred CcEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHHHH---HH--------Hh------CCCEEEEECCC-cCCCCCC
Confidence 35788866654332 68899999987433333 344333 21 11 33688999986 9999985
Q ss_pred CCCCCCccCChHHHHHHHHHHHH
Q 041833 181 NTSSDITTNGDKRTAEDSLKFLL 203 (427)
Q Consensus 181 ~~~~~~~~~~~~~~A~d~~~fL~ 203 (427)
.. .+. .+.++..+|+..|++
T Consensus 60 ~r--g~~-~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 60 KR--GHI-DSFDDYVDDLHQFIQ 79 (79)
T ss_pred cc--ccc-CCHHHHHHHHHHHhC
Confidence 32 232 367788888877763
No 133
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=90.64 E-value=0.78 Score=46.13 Aligned_cols=91 Identities=25% Similarity=0.314 Sum_probs=56.0
Q ss_pred CCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc-----ccceEEEEeCCCCcccCcCCCCCCCcc
Q 041833 114 DPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN-----QVANILFLDSPVGVGFSYSNTSSDITT 188 (427)
Q Consensus 114 ~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~-----~~anvlfiDqP~G~GfSy~~~~~~~~~ 188 (427)
+++++--||+.||- |.+.|+== .+......|. ..+|++.+--| |+|+|.+..
T Consensus 133 ~a~~~RWiL~s~GN--------g~~~E~~~--------~~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~------ 189 (365)
T PF05677_consen 133 EAKPQRWILVSNGN--------GECYENRA--------MLDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPP------ 189 (365)
T ss_pred CCCCCcEEEEEcCC--------hHHhhhhh--------hhccccHHHHHHHHHcCCcEEEECCC-ccccCCCCC------
Confidence 45777899999987 33334200 0111222333 36899999988 999997653
Q ss_pred CChHHHHHHHHHHHHHHHHHcc-CCCCCCeEEecCCcCccch
Q 041833 189 NGDKRTAEDSLKFLLKWLERFS-QFKGRDFYISGESYGGHYV 229 (427)
Q Consensus 189 ~~~~~~A~d~~~fL~~f~~~fp-~~~~~~~yI~GESYGG~yv 229 (427)
+.++.+.|-.+ +.++++..+ .-+.+++.+-|+|.||...
T Consensus 190 -s~~dLv~~~~a-~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vq 229 (365)
T PF05677_consen 190 -SRKDLVKDYQA-CVRYLRDEEQGPKAKNIILYGHSLGGGVQ 229 (365)
T ss_pred -CHHHHHHHHHH-HHHHHHhcccCCChheEEEeeccccHHHH
Confidence 23444444333 444554433 2456789999999999543
No 134
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=90.45 E-value=0.98 Score=40.51 Aligned_cols=77 Identities=18% Similarity=0.243 Sum_probs=48.8
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
..+++.+|.| |.|.+.... .+.+..+++....+.. . ....+++++|+|+||..+-.+|..+.++.
T Consensus 25 ~~~v~~~~~~-g~~~~~~~~------~~~~~~~~~~~~~l~~---~---~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEPLP------ASADALVEAQAEAVLR---A---AGGRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC-CCCCCCCCC------CCHHHHHHHHHHHHHH---h---cCCCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 4678899987 777543221 1445555555544442 2 23568999999999988888887765532
Q ss_pred cCCcceecceeeeccCc
Q 041833 243 TGEKAINLKGYMVGNAL 259 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~ 259 (427)
..++++++.++.
T Consensus 90 -----~~~~~l~~~~~~ 101 (212)
T smart00824 90 -----IPPAAVVLLDTY 101 (212)
T ss_pred -----CCCcEEEEEccC
Confidence 236666666543
No 135
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=90.37 E-value=0.47 Score=48.67 Aligned_cols=67 Identities=22% Similarity=0.330 Sum_probs=42.9
Q ss_pred ccceEEEEeC-------CCCcccCcCC-CCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHH
Q 041833 162 QVANILFLDS-------PVGVGFSYSN-TSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQL 232 (427)
Q Consensus 162 ~~anvlfiDq-------P~G~GfSy~~-~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~l 232 (427)
..|-|||+|+ |.|.- ||.. ..-+|. |.+++-.|..++|+ ++++...=+..|++.+|-|||||....+
T Consensus 110 ~~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgyL--tseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLaAWf 184 (492)
T KOG2183|consen 110 LKALLVFAEHRYYGESLPFGSQ-SYKDARHLGYL--TSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLAAWF 184 (492)
T ss_pred hCceEEEeehhccccCCCCcch-hccChhhhccc--cHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHHHHH
Confidence 3578899985 44443 2322 123454 67788788777555 5565444456689999999999665443
No 136
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=90.05 E-value=2.2 Score=41.50 Aligned_cols=104 Identities=14% Similarity=0.193 Sum_probs=67.3
Q ss_pred CceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHH
Q 041833 119 PLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDS 198 (427)
Q Consensus 119 Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~ 198 (427)
|.|+++|++=|.-...-.+..+++|- .-++-++.| |.|. .. ... .+.++.++..
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~~-------------------~~v~~l~a~-g~~~--~~--~~~--~~l~~~a~~y 54 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGPL-------------------LPVYGLQAP-GYGA--GE--QPF--ASLDDMAAAY 54 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhccC-------------------ceeeccccC-cccc--cc--ccc--CCHHHHHHHH
Confidence 67899998877654432445555552 235566666 5543 11 111 2677888777
Q ss_pred HHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 199 LKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 199 ~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
.+.|++ ..|+ -|.+|.|.|+||..+-..|.++..+.. -+.-++|.+....
T Consensus 55 v~~Ir~---~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~-------~Va~L~llD~~~~ 104 (257)
T COG3319 55 VAAIRR---VQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGE-------EVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHH---hCCC---CCEEEEeeccccHHHHHHHHHHHhCCC-------eEEEEEEeccCCC
Confidence 777763 4443 399999999999888888888876642 2555666666655
No 137
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=89.30 E-value=2.5 Score=43.28 Aligned_cols=66 Identities=17% Similarity=0.154 Sum_probs=48.9
Q ss_pred ccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc-CCcHHHHHHHH
Q 041833 330 LFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL-HRPKPALTLIK 408 (427)
Q Consensus 330 ~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~-dqPe~~~~mi~ 408 (427)
.+.++|++|--|--.....+..+.+.|+-+. .+-.|+|+||..-. +--+.....++
T Consensus 262 ~~PK~ii~atgDeFf~pD~~~~y~d~L~G~K-----------------------~lr~vPN~~H~~~~~~~~~~l~~f~~ 318 (367)
T PF10142_consen 262 TMPKYIINATGDEFFVPDSSNFYYDKLPGEK-----------------------YLRYVPNAGHSLIGSDVVQSLRAFYN 318 (367)
T ss_pred CccEEEEecCCCceeccCchHHHHhhCCCCe-----------------------eEEeCCCCCcccchHHHHHHHHHHHH
Confidence 4568899999999888889999999886421 35679999998654 33444455556
Q ss_pred HHHcCCCCCC
Q 041833 409 SFLSGRSMPC 418 (427)
Q Consensus 409 ~fL~g~~l~~ 418 (427)
+.+.|+++|+
T Consensus 319 ~~~~~~~lP~ 328 (367)
T PF10142_consen 319 RIQNGRPLPQ 328 (367)
T ss_pred HHHcCCCCCe
Confidence 6678999985
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=89.26 E-value=0.9 Score=43.37 Aligned_cols=72 Identities=13% Similarity=0.165 Sum_probs=45.3
Q ss_pred hHHHHHHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 191 DKRTAEDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 191 ~~~~A~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
+.+.|......|.+|++..-+. ..++++|++||+|+..+...-+.+....... ....+|..|++.+|.+|..
T Consensus 68 d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~-~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 68 DRESARFSGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERP-DVKARFDNVILAAPDIDND 140 (233)
T ss_pred hhhhHHHHHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccch-hhHhhhheEEEECCCCCHH
Confidence 4444544444455555443233 5678999999999977766655555543210 1134788999999998864
No 139
>PLN02571 triacylglycerol lipase
Probab=88.10 E-value=1.1 Score=46.47 Aligned_cols=70 Identities=13% Similarity=0.211 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh----cCCcceecceeeeccCccCc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA----TGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~----~~~~~inLkGi~ign~~id~ 262 (427)
..+.+++...|+++++.+|.. ..+++|+|||.||..+-..|..|....-. .....+.+..+..|.|-+..
T Consensus 204 ~Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRVGN 277 (413)
T PLN02571 204 TSARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRVGD 277 (413)
T ss_pred hhHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCccC
Confidence 355678888888888887654 33799999999998877777766543110 01123556778888888764
No 140
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=87.88 E-value=0.92 Score=42.02 Aligned_cols=63 Identities=14% Similarity=0.228 Sum_probs=52.2
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
+.+++|.|+...++.+.++ ++.+++.|+|-|+|.-.+|.+..++.... +-.++++++..|-..
T Consensus 46 tP~~~a~Dl~~~i~~y~~~---w~~~~vvLiGYSFGADvlP~~~nrLp~~~------r~~v~~v~Ll~p~~~ 108 (192)
T PF06057_consen 46 TPEQTAADLARIIRHYRAR---WGRKRVVLIGYSFGADVLPFIYNRLPAAL------RARVAQVVLLSPSTT 108 (192)
T ss_pred CHHHHHHHHHHHHHHHHHH---hCCceEEEEeecCCchhHHHHHhhCCHHH------HhheeEEEEeccCCc
Confidence 7899999999999988775 67789999999999999999999887754 345777777766544
No 141
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=86.45 E-value=11 Score=39.06 Aligned_cols=59 Identities=15% Similarity=0.209 Sum_probs=42.6
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhc---CCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc---CCcHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDAL---NLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL---HRPKPALT 405 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L---~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~---dqPe~~~~ 405 (427)
..|.+.|..|.|||+..++...+.. .-..+ ++..+.++||+--. .-+++..-
T Consensus 340 pll~V~ge~D~I~p~~qt~aa~~l~~~~~s~~k----------------------~~~~~~~~GH~Gvf~G~r~~~~i~P 397 (406)
T TIGR01849 340 ALLTVEGENDDISGLGQTKAALRLCTGIPEDMK----------------------RHHLQPGVGHYGVFSGSRFREEIYP 397 (406)
T ss_pred ceEEEeccCCCcCCHHHhHHHHHHhhcCChhhc----------------------eEeecCCCCeEEEeeChhhhhhhch
Confidence 3579999999999999999887753 32222 56788899998433 34556667
Q ss_pred HHHHHHc
Q 041833 406 LIKSFLS 412 (427)
Q Consensus 406 mi~~fL~ 412 (427)
.|.+||.
T Consensus 398 ~i~~wl~ 404 (406)
T TIGR01849 398 LVREFIR 404 (406)
T ss_pred HHHHHHH
Confidence 7777775
No 142
>PLN02719 triacylglycerol lipase
Probab=84.98 E-value=1.8 Score=45.82 Aligned_cols=72 Identities=15% Similarity=0.226 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCC--CCCeEEecCCcCccchHHHHHHHHHhhhh--cCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFK--GRDFYISGESYGGHYVPQLSKAIIRHNQA--TGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~--~~~~yI~GESYGG~yvP~lA~~i~~~~~~--~~~~~inLkGi~ign~~id~~ 263 (427)
..+.+++...|++.++.+|... ...++|+|||.||..+--.|..|.+..-. .....+.+.-+..|.|-+...
T Consensus 273 ~SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRVGN~ 348 (518)
T PLN02719 273 FSAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRVGNI 348 (518)
T ss_pred hhHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCccCH
Confidence 4567888888999888887653 34699999999998877777777654210 111234566677888877653
No 143
>PLN02753 triacylglycerol lipase
Probab=84.47 E-value=2 Score=45.62 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=50.4
Q ss_pred ChHHHHHHHHHHHHHHHHHccC--CCCCCeEEecCCcCccchHHHHHHHHHhhh--hcCCcceecceeeeccCccCcc
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQ--FKGRDFYISGESYGGHYVPQLSKAIIRHNQ--ATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~--~~~~~~yI~GESYGG~yvP~lA~~i~~~~~--~~~~~~inLkGi~ign~~id~~ 263 (427)
+...+.+++...|++.++.+|. ...-.++|+|||.||..+-..|..|....- ......+++.-+..|.|-+...
T Consensus 285 ~k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRVGN~ 362 (531)
T PLN02753 285 AKFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRVGNV 362 (531)
T ss_pred chhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCccCH
Confidence 3456778889999998887753 234579999999999877777777655311 1112245567777888877643
No 144
>PRK04940 hypothetical protein; Provisional
Probab=84.01 E-value=1.4 Score=40.51 Aligned_cols=59 Identities=17% Similarity=0.133 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccc
Q 041833 191 DKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHD 265 (427)
Q Consensus 191 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~ 265 (427)
..++...+.+.+.++... .. ..++.|+|.|.||.|+-.||.+. .++. ++.||.+.|...
T Consensus 39 P~~a~~~l~~~i~~~~~~--~~-~~~~~liGSSLGGyyA~~La~~~------------g~~a-VLiNPAv~P~~~ 97 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQL--SD-DERPLICGVGLGGYWAERIGFLC------------GIRQ-VIFNPNLFPEEN 97 (180)
T ss_pred HHHHHHHHHHHHHHhhhc--cC-CCCcEEEEeChHHHHHHHHHHHH------------CCCE-EEECCCCChHHH
Confidence 344444455544433211 01 24799999999998888888742 2444 478999998654
No 145
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=83.97 E-value=6.4 Score=36.01 Aligned_cols=57 Identities=19% Similarity=0.240 Sum_probs=42.5
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc----CCcHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL----HRPKPALTL 406 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~----dqPe~~~~m 406 (427)
.+.+++.-+.|..|++.-++.+.+.++- .++.+-.+||.--. +=|+ -+.+
T Consensus 118 fps~vvaSrnDp~~~~~~a~~~a~~wgs-------------------------~lv~~g~~GHiN~~sG~g~wpe-g~~~ 171 (181)
T COG3545 118 FPSVVVASRNDPYVSYEHAEDLANAWGS-------------------------ALVDVGEGGHINAESGFGPWPE-GYAL 171 (181)
T ss_pred CceeEEEecCCCCCCHHHHHHHHHhccH-------------------------hheecccccccchhhcCCCcHH-HHHH
Confidence 4567999999999999999999887642 46888999998543 2343 3667
Q ss_pred HHHHHcC
Q 041833 407 IKSFLSG 413 (427)
Q Consensus 407 i~~fL~g 413 (427)
+.+|+..
T Consensus 172 l~~~~s~ 178 (181)
T COG3545 172 LAQLLSR 178 (181)
T ss_pred HHHHhhh
Confidence 7777653
No 146
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=83.89 E-value=1.2 Score=41.88 Aligned_cols=42 Identities=24% Similarity=0.356 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHH
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKA 235 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~ 235 (427)
+-+-.|+..+.+.|++.++ ++|||+|+|||=|++.+-.|-+.
T Consensus 74 ~~ay~DV~~AF~~yL~~~n--~GRPfILaGHSQGs~~l~~LL~e 115 (207)
T PF11288_consen 74 DLAYSDVRAAFDYYLANYN--NGRPFILAGHSQGSMHLLRLLKE 115 (207)
T ss_pred HhhHHHHHHHHHHHHHhcC--CCCCEEEEEeChHHHHHHHHHHH
Confidence 3445788888888888864 58899999999999655555444
No 147
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=82.44 E-value=7 Score=42.20 Aligned_cols=53 Identities=26% Similarity=0.251 Sum_probs=39.3
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHH-HHHHccCCCCCCeEEecCCcC
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLK-WLERFSQFKGRDFYISGESYG 225 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~-f~~~fp~~~~~~~yI~GESYG 225 (427)
++..+.+.|.+-+.|- .+....++.+..|.+. .++..-+|..++++|+|-|+|
T Consensus 207 evvev~tfdl~n~igG-----------~nI~h~ae~~vSf~r~kvlei~gefpha~IiLvGrsmG 260 (784)
T KOG3253|consen 207 EVVEVPTFDLNNPIGG-----------ANIKHAAEYSVSFDRYKVLEITGEFPHAPIILVGRSMG 260 (784)
T ss_pred eeeeeccccccCCCCC-----------cchHHHHHHHHHHhhhhhhhhhccCCCCceEEEecccC
Confidence 4556666666644442 1678889999888874 445677899999999999999
No 148
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=81.80 E-value=14 Score=38.37 Aligned_cols=58 Identities=10% Similarity=-0.026 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHHH-ccCCC-CCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 193 RTAEDSLKFLLKWLER-FSQFK-GRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~-fp~~~-~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
...+.+.+-|.-|++. ++--. .....|+|.||||.-+-++|..- +-.+.+++..+|.+
T Consensus 264 ~f~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~----------Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 264 DFWLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHW----------PERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhC----------cccccEEEEeccce
Confidence 3344444444445443 32212 34589999999996666666532 34467777777653
No 149
>PLN02408 phospholipase A1
Probab=81.56 E-value=3.1 Score=42.46 Aligned_cols=64 Identities=14% Similarity=0.096 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
...+++.+.|++.++.+|.. ...++|+|||.||..+-..|..|..... . ...+.-+..|.|-+.
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~~~---~-~~~V~v~tFGsPRVG 242 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTTFK---R-APMVTVISFGGPRVG 242 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHhcC---C-CCceEEEEcCCCCcc
Confidence 45677788888888887754 2359999999999777666666654321 0 112445556666655
No 150
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=81.36 E-value=10 Score=36.07 Aligned_cols=183 Identities=16% Similarity=0.131 Sum_probs=102.6
Q ss_pred EEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCC
Q 041833 166 ILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGE 245 (427)
Q Consensus 166 vlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~ 245 (427)
.+-+|= .|-|-|.++=. | .+-...|+|+...+|-|-. ...-==.|.|||=||-.+-..|.++.+- +
T Consensus 65 ~fRfDF-~GnGeS~gsf~--~--Gn~~~eadDL~sV~q~~s~----~nr~v~vi~gHSkGg~Vvl~ya~K~~d~-----~ 130 (269)
T KOG4667|consen 65 AFRFDF-SGNGESEGSFY--Y--GNYNTEADDLHSVIQYFSN----SNRVVPVILGHSKGGDVVLLYASKYHDI-----R 130 (269)
T ss_pred EEEEEe-cCCCCcCCccc--c--CcccchHHHHHHHHHHhcc----CceEEEEEEeecCccHHHHHHHHhhcCc-----h
Confidence 445665 48998876532 1 1334457999998886533 1111246889999998888888877651 2
Q ss_pred cceecceeeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCccccccccc
Q 041833 246 KAINLKGYMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYNRDLL 325 (427)
Q Consensus 246 ~~inLkGi~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Ydi~~p 325 (427)
.-||+.|=..+...|.... ...+.++....|.|+-...+ -.+.+ -...+| .++.+....-.- .-.|.
T Consensus 131 ~viNcsGRydl~~~I~eRl-g~~~l~~ike~Gfid~~~rk-----G~y~~--rvt~eS--lmdrLntd~h~a-clkId-- 197 (269)
T KOG4667|consen 131 NVINCSGRYDLKNGINERL-GEDYLERIKEQGFIDVGPRK-----GKYGY--RVTEES--LMDRLNTDIHEA-CLKID-- 197 (269)
T ss_pred heEEcccccchhcchhhhh-cccHHHHHHhCCceecCccc-----CCcCc--eecHHH--HHHHHhchhhhh-hcCcC--
Confidence 3566666555544443222 23455555566665432100 00000 011111 111111100000 00010
Q ss_pred ccccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHH
Q 041833 326 TFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKP 402 (427)
Q Consensus 326 ~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~ 402 (427)
..-++|-.+|-.|-++|...+.++++.+.-. .+-+|+||-|.---+|-+.
T Consensus 198 ---~~C~VLTvhGs~D~IVPve~AkefAk~i~nH------------------------~L~iIEgADHnyt~~q~~l 247 (269)
T KOG4667|consen 198 ---KQCRVLTVHGSEDEIVPVEDAKEFAKIIPNH------------------------KLEIIEGADHNYTGHQSQL 247 (269)
T ss_pred ---ccCceEEEeccCCceeechhHHHHHHhccCC------------------------ceEEecCCCcCccchhhhH
Confidence 1245788999999999999999999988641 4678999999876665443
No 151
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=81.10 E-value=7.6 Score=39.66 Aligned_cols=130 Identities=21% Similarity=0.338 Sum_probs=80.8
Q ss_pred CCeeEEEEEEeeccC--C-CCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCcc--ccceEEEEeCCCC
Q 041833 100 SGRALFYWFVEAVED--P-DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWN--QVANILFLDSPVG 174 (427)
Q Consensus 100 ~~~~lFy~f~es~~~--p-~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~--~~anvlfiDqP~G 174 (427)
.|-+++|--+.-... + .-.|| |.+||=||+=-- |.-+=|+.-++. .++-. -.+.||-=-.| |
T Consensus 132 eGL~iHFlhvk~p~~k~~k~v~Pl-Ll~HGwPGsv~E----FykfIPlLT~p~-------~hg~~~d~~FEVI~PSlP-G 198 (469)
T KOG2565|consen 132 EGLKIHFLHVKPPQKKKKKKVKPL-LLLHGWPGSVRE----FYKFIPLLTDPK-------RHGNESDYAFEVIAPSLP-G 198 (469)
T ss_pred cceeEEEEEecCCccccCCcccce-EEecCCCchHHH----HHhhhhhhcCcc-------ccCCccceeEEEeccCCC-C
Confidence 466788765543321 2 23454 568999985433 334445443321 12222 25677777777 9
Q ss_pred cccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceee
Q 041833 175 VGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYM 254 (427)
Q Consensus 175 ~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ 254 (427)
-|+|...+..++ +..++|+-+...+. ++.-++|||=|--||..++..+|....+ |+.|+=
T Consensus 199 ygwSd~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPe----------nV~GlH 258 (469)
T KOG2565|consen 199 YGWSDAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPE----------NVLGLH 258 (469)
T ss_pred cccCcCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcch----------hhhHhh
Confidence 999998876665 55666666665554 4677899999988999888888876544 455555
Q ss_pred eccCccCc
Q 041833 255 VGNALTDD 262 (427)
Q Consensus 255 ign~~id~ 262 (427)
+-++.+.+
T Consensus 259 lnm~~~~s 266 (469)
T KOG2565|consen 259 LNMCFVNS 266 (469)
T ss_pred hcccccCC
Confidence 54444444
No 152
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=80.87 E-value=18 Score=36.70 Aligned_cols=32 Identities=34% Similarity=0.625 Sum_probs=23.2
Q ss_pred HHHHHHHHHccCCCCCCeEEecCCcCccchHHHHH
Q 041833 200 KFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 200 ~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
..|..|++.- .| .++-|+|-|+||+.+...|.
T Consensus 163 ~~Ll~Wl~~~-G~--~~~g~~G~SmGG~~A~laa~ 194 (348)
T PF09752_consen 163 RALLHWLERE-GY--GPLGLTGISMGGHMAALAAS 194 (348)
T ss_pred HHHHHHHHhc-CC--CceEEEEechhHhhHHhhhh
Confidence 4577788774 34 49999999999986654443
No 153
>PLN02324 triacylglycerol lipase
Probab=80.49 E-value=3.7 Score=42.58 Aligned_cols=71 Identities=14% Similarity=0.171 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh-----cCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA-----TGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~-----~~~~~inLkGi~ign~~id~~ 263 (427)
..+-+++...|++.++.+|.. ...++|+|||.||..+-..|..|.+.... .....+++.-+..|.|-+...
T Consensus 193 ~SareqVl~eV~~L~~~Yp~e-~~sItvTGHSLGGALAtLaA~dl~~~~~n~~~~~~~~~~~~V~v~TFGsPRVGN~ 268 (415)
T PLN02324 193 TSAQEQVQGELKRLLELYKNE-EISITFTGHSLGAVMSVLSAADLVYGKKNKINISLQKKQVPITVFAFGSPRIGDH 268 (415)
T ss_pred hHHHHHHHHHHHHHHHHCCCC-CceEEEecCcHHHHHHHHHHHHHHHhcccccccccccCCCceEEEEecCCCcCCH
Confidence 456777888888888877643 23699999999998777777777653210 011244566666777777643
No 154
>PLN02761 lipase class 3 family protein
Probab=80.14 E-value=3.7 Score=43.68 Aligned_cols=72 Identities=14% Similarity=0.165 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHHHccCC-CC--CCeEEecCCcCccchHHHHHHHHHhhhh---cCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLERFSQF-KG--RDFYISGESYGGHYVPQLSKAIIRHNQA---TGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~-~~--~~~yI~GESYGG~yvP~lA~~i~~~~~~---~~~~~inLkGi~ign~~id~~ 263 (427)
..+.+++...|++..+.+|.. ++ -.++|+|||.||..+-..|..|...+-. .....+++.-+..|.|-+...
T Consensus 268 ~SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPRVGN~ 345 (527)
T PLN02761 268 FSAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPRVGNL 345 (527)
T ss_pred hhHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCCcCCH
Confidence 456778888888888877532 22 3599999999998776666666543211 012345567777788877643
No 155
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=79.83 E-value=2.8 Score=42.30 Aligned_cols=61 Identities=15% Similarity=0.294 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
.++.+-++.....+| +-.++|+|||.||.++...|..|...... ....++-+-.|-|-+..
T Consensus 155 ~~~~~~~~~L~~~~~---~~~i~vTGHSLGgAlA~laa~~i~~~~~~---~~~~v~v~tFG~PRvGn 215 (336)
T KOG4569|consen 155 SGLDAELRRLIELYP---NYSIWVTGHSLGGALASLAALDLVKNGLK---TSSPVKVYTFGQPRVGN 215 (336)
T ss_pred HHHHHHHHHHHHhcC---CcEEEEecCChHHHHHHHHHHHHHHcCCC---CCCceEEEEecCCCccc
Confidence 444455555556666 55899999999999998888888776531 24556666677776654
No 156
>PLN02847 triacylglycerol lipase
Probab=79.02 E-value=2.8 Score=45.20 Aligned_cols=62 Identities=21% Similarity=0.217 Sum_probs=39.3
Q ss_pred cCChHHHHHHHHHHH----HHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeecc
Q 041833 188 TNGDKRTAEDSLKFL----LKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGN 257 (427)
Q Consensus 188 ~~~~~~~A~d~~~fL----~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign 257 (427)
+.+.-.+|+.+...+ ++-+..+|.| ++.|+|||.||-.+.-++..+.++. ...++..+..+.
T Consensus 223 H~Gml~AArwI~~~i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~-----~fssi~CyAFgP 288 (633)
T PLN02847 223 HCGMVAAARWIAKLSTPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQK-----EFSSTTCVTFAP 288 (633)
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCC-----CCCCceEEEecC
Confidence 346666666666544 4444556665 7999999999987777765553322 133456666664
No 157
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=78.82 E-value=6.8 Score=38.10 Aligned_cols=66 Identities=14% Similarity=0.223 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHHHHHHHH-HccC---CCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCcc
Q 041833 190 GDKRTAEDSLKFLLKWLE-RFSQ---FKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALT 260 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~-~fp~---~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~i 260 (427)
.+.+.+.++.++|.+=++ ..|. ---.++.|+|||=||+.+-.++....+. ...+++++++..+|+-
T Consensus 62 ~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHSrGGk~Af~~al~~~~~-----~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 62 DEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHSRGGKVAFAMALGNASS-----SLDLRFSALILLDPVD 131 (259)
T ss_pred hhHHHHHHHHHHHHhcchhhccccccccccceEEeeeCCCCHHHHHHHhhhccc-----ccccceeEEEEecccc
Confidence 344556666555544222 1220 0122599999999998655555432111 2367899999998884
No 158
>PLN02802 triacylglycerol lipase
Probab=78.79 E-value=3.8 Score=43.46 Aligned_cols=65 Identities=11% Similarity=0.170 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
.+.+++..-|+++++.+|.. ...++|+|||.||..+-..|..|..... ..+.+..+..|.|-+..
T Consensus 309 S~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~----~~~pV~vyTFGsPRVGN 373 (509)
T PLN02802 309 SLSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVP----AAPPVAVFSFGGPRVGN 373 (509)
T ss_pred hHHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCC----CCCceEEEEcCCCCccc
Confidence 45677777788888776532 2369999999999877766666654321 12245566677776654
No 159
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=77.89 E-value=4.7 Score=41.61 Aligned_cols=61 Identities=23% Similarity=0.250 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHHccCCCC-CCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKG-RDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~-~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
--.|.|...+|..-.+.+|.+++ .|+++.|.|||| |...|+.+|. +-.+.||+=-.+++-|
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~a---------P~~~~~~iDns~~~~p 221 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIA---------PWLFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhC---------ccceeEEEecCccccc
Confidence 45688898889988889999986 799999999999 3334444331 4445666544455444
No 160
>PLN02310 triacylglycerol lipase
Probab=77.41 E-value=4.2 Score=42.03 Aligned_cols=65 Identities=9% Similarity=0.114 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 193 RTAEDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
.+.+++...+++.++.+++- ....|.|+|||.||..+-..|..|... ...+++.-+..|.|-+..
T Consensus 186 sa~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~-----~~~~~v~vyTFGsPRVGN 251 (405)
T PLN02310 186 SASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATT-----IPDLFVSVISFGAPRVGN 251 (405)
T ss_pred hHHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHh-----CcCcceeEEEecCCCccc
Confidence 34566777777776665431 234699999999997776555555432 224456667778887764
No 161
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=77.22 E-value=3.8 Score=38.93 Aligned_cols=38 Identities=21% Similarity=0.426 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHH
Q 041833 197 DSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIR 238 (427)
Q Consensus 197 d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~ 238 (427)
...+++++..+.++. +++|+|||-||..+-+.|..+.+
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~ 107 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDD 107 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccH
Confidence 334555555555433 69999999999888777776443
No 162
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=77.17 E-value=6.4 Score=37.44 Aligned_cols=86 Identities=13% Similarity=0.100 Sum_probs=52.7
Q ss_pred eEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcC
Q 041833 165 NILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATG 244 (427)
Q Consensus 165 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~ 244 (427)
+...|+-|.+.+-=.+-....+. .+..+-++.+.+.+..+.. .+++++|+|.|-|+..+-...+++.+...
T Consensus 4 ~~~~V~YPa~f~P~~g~~~~t~~-~Sv~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~--- 74 (225)
T PF08237_consen 4 NVVAVDYPASFWPVTGIGSPTYD-ESVAEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGD--- 74 (225)
T ss_pred ceEEecCCchhcCcCCCCCCccc-hHHHHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCC---
Confidence 45667777643331111111122 1455556666676765543 57899999999999777766666665432
Q ss_pred CcceecceeeeccCc
Q 041833 245 EKAINLKGYMVGNAL 259 (427)
Q Consensus 245 ~~~inLkGi~ign~~ 259 (427)
...-++..++++||.
T Consensus 75 ~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 75 PPPDDLSFVLIGNPR 89 (225)
T ss_pred CCcCceEEEEecCCC
Confidence 112578899999986
No 163
>PF03283 PAE: Pectinacetylesterase
Probab=77.06 E-value=16 Score=37.38 Aligned_cols=133 Identities=18% Similarity=0.158 Sum_probs=67.1
Q ss_pred eeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhh----hhcCCeE-----EcCCC---CceeeCCCCccccceEEEE
Q 041833 102 RALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEA----EEIGPFH-----IKPDG---KTLYLNPYSWNQVANILFL 169 (427)
Q Consensus 102 ~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~----~e~GP~~-----~~~~~---~~l~~n~~sW~~~anvlfi 169 (427)
..-.|++.+.. ....+-+||.|.||--|.+.. --. .++|-.. +..+| .....||.=+ ..|+|||
T Consensus 35 S~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~-tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~--~wN~V~v 110 (361)
T PF03283_consen 35 SPPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAE-TCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFY--NWNHVFV 110 (361)
T ss_pred CCCcEEEccCC-CCCCceEEEEeccchhcCChh-HHhhhccCccccccchhhhccccccccCCcccCCccc--cccEEEE
Confidence 34445555542 345678999999998888753 221 2333221 11121 1223455222 2677888
Q ss_pred eCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHH-HH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhh
Q 041833 170 DSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWL-ER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHN 240 (427)
Q Consensus 170 DqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~-~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~ 240 (427)
=-=-|.-|+-...+..+...+.--....+++.+.+++ .. +++ ..+++|+|.|-||.-+..-+.++.+.-
T Consensus 111 pYC~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~l 181 (361)
T PF03283_consen 111 PYCDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRL 181 (361)
T ss_pred EecCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHh
Confidence 5443443433222111110011112233333344443 33 332 347999999999977777777776654
No 164
>PLN02934 triacylglycerol lipase
Probab=76.23 E-value=5.3 Score=42.42 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
-.++...|+++++.+|.+ +++|+|||.||..+-..|..+.
T Consensus 304 y~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~ 343 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLV 343 (515)
T ss_pred HHHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHH
Confidence 345667777777777764 7999999999977665555443
No 165
>PLN00413 triacylglycerol lipase
Probab=75.60 E-value=4.2 Score=42.80 Aligned_cols=38 Identities=24% Similarity=0.406 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 197 DSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 197 d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
++...|++.++.+|.+ +++|+|||.||..+-..|..+.
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~ 306 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLI 306 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHH
Confidence 5666677777776644 7999999999987766665554
No 166
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=74.42 E-value=4.1 Score=38.30 Aligned_cols=49 Identities=16% Similarity=0.161 Sum_probs=35.2
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHh
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRH 239 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~ 239 (427)
+.+..++.+.+.|.+.++..+.- .+++.++|||.||.++-+....+.+.
T Consensus 54 gI~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~ 102 (217)
T PF05057_consen 54 GIDVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDK 102 (217)
T ss_pred hhHHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhc
Confidence 56667888888787777655332 46899999999998876555555444
No 167
>PLN03037 lipase class 3 family protein; Provisional
Probab=72.41 E-value=6.5 Score=41.84 Aligned_cols=65 Identities=17% Similarity=0.195 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 194 TAEDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 194 ~A~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
+-+++.+-|++.++.+++. ....++|+|||.||..+--.|..|...... ..++.-+..|.|-+..
T Consensus 296 areQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~----~~~VtvyTFGsPRVGN 361 (525)
T PLN03037 296 ASEQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPA----LSNISVISFGAPRVGN 361 (525)
T ss_pred hHHHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCC----CCCeeEEEecCCCccC
Confidence 3456666677777766543 234699999999997776666555543211 1145555667676654
No 168
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=70.94 E-value=79 Score=30.88 Aligned_cols=74 Identities=18% Similarity=0.113 Sum_probs=41.0
Q ss_pred ccccceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHH
Q 041833 328 LVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLI 407 (427)
Q Consensus 328 lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi 407 (427)
-|.+++|++.||.|--.+..|+.-|.+++-.... .++--++|.. ....=+.|-|.-.++.|..+..+
T Consensus 214 ~~~~evl~IaGDl~dg~~tDG~Vp~assls~~~l-----------f~~~~ksy~e-~~~~Gk~a~Hs~lhen~~v~~yv- 280 (288)
T COG4814 214 SPNTEVLLIAGDLDDGKQTDGAVPWASSLSIYHL-----------FKKNGKSYIE-SLYKGKDARHSKLHENPTVAKYV- 280 (288)
T ss_pred CCCcEEEEEecccccCCcCCCceechHhHHHHHH-----------hccCcceeEE-EeeeCCcchhhccCCChhHHHHH-
Confidence 3567889999998776666665555544421100 0000001110 12334568999999998776554
Q ss_pred HHHHcCC
Q 041833 408 KSFLSGR 414 (427)
Q Consensus 408 ~~fL~g~ 414 (427)
..||-+.
T Consensus 281 ~~FLw~~ 287 (288)
T COG4814 281 KNFLWET 287 (288)
T ss_pred HHHhhcC
Confidence 4577553
No 169
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=70.29 E-value=11 Score=39.76 Aligned_cols=22 Identities=32% Similarity=0.483 Sum_probs=15.7
Q ss_pred CCCCC--CeEEecCCcCccchHHH
Q 041833 211 QFKGR--DFYISGESYGGHYVPQL 232 (427)
Q Consensus 211 ~~~~~--~~yI~GESYGG~yvP~l 232 (427)
.|.+. ++-|+|||-|++-+-.|
T Consensus 174 ~FGGDp~NVTl~GeSAGa~si~~L 197 (491)
T COG2272 174 AFGGDPQNVTLFGESAGAASILTL 197 (491)
T ss_pred HhCCCccceEEeeccchHHHHHHh
Confidence 34443 59999999999765443
No 170
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=68.90 E-value=26 Score=37.09 Aligned_cols=114 Identities=18% Similarity=0.308 Sum_probs=71.2
Q ss_pred eeEEEEEEeeccCCCCCCceEeecCCCCchhHhhhhhhh--c-CCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccC
Q 041833 102 RALFYWFVEAVEDPDSKPLVLWLNGGPGCSSIAYGEAEE--I-GPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFS 178 (427)
Q Consensus 102 ~~lFy~f~es~~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e--~-GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfS 178 (427)
..++|+|-+- .-.-||.+.+.|--..-... |.++- + .||. |+=|+.+ -|-+
T Consensus 276 eEi~yYFnPG---D~KPPL~VYFSGyR~aEGFE-gy~MMk~Lg~PfL---------------------L~~DpRl-eGGa 329 (511)
T TIGR03712 276 QEFIYYFNPG---DFKPPLNVYFSGYRPAEGFE-GYFMMKRLGAPFL---------------------LIGDPRL-EGGA 329 (511)
T ss_pred CeeEEecCCc---CCCCCeEEeeccCcccCcch-hHHHHHhcCCCeE---------------------Eeecccc-ccce
Confidence 3467776653 34569999999965555555 55544 2 3654 4555443 3333
Q ss_pred cCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 179 YSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 179 y~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
+-. +.++.-+.+.+.+++-++.- .|..++++|.|-|||.-=+-+.+. .++-.+|+||-|
T Consensus 330 FYl--------Gs~eyE~~I~~~I~~~L~~L-gF~~~qLILSGlSMGTfgAlYYga------------~l~P~AIiVgKP 388 (511)
T TIGR03712 330 FYL--------GSDEYEQGIINVIQEKLDYL-GFDHDQLILSGLSMGTFGALYYGA------------KLSPHAIIVGKP 388 (511)
T ss_pred eee--------CcHHHHHHHHHHHHHHHHHh-CCCHHHeeeccccccchhhhhhcc------------cCCCceEEEcCc
Confidence 321 34444555666666666543 588889999999998633333333 677888999988
Q ss_pred ccCc
Q 041833 259 LTDD 262 (427)
Q Consensus 259 ~id~ 262 (427)
+++-
T Consensus 389 L~NL 392 (511)
T TIGR03712 389 LVNL 392 (511)
T ss_pred ccch
Confidence 8753
No 171
>PLN02162 triacylglycerol lipase
Probab=68.81 E-value=5.9 Score=41.61 Aligned_cols=62 Identities=21% Similarity=0.275 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceec-ceeeeccCccCcc
Q 041833 197 DSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINL-KGYMVGNALTDDY 263 (427)
Q Consensus 197 d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inL-kGi~ign~~id~~ 263 (427)
.+...|++.+.++|. .+++|+|||.||..+-..|..+..+... .....+ .-+..|.|-+...
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~~~~~--~l~~~~~~vYTFGqPRVGn~ 325 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAIHGED--ELLDKLEGIYTFGQPRVGDE 325 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHHcccc--ccccccceEEEeCCCCccCH
Confidence 445556666666664 4799999999997665555444332210 111112 2355676766543
No 172
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=66.43 E-value=1.6e+02 Score=30.18 Aligned_cols=61 Identities=21% Similarity=0.134 Sum_probs=47.6
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKSF 410 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~f 410 (427)
.++|++.=..|++.|..-.++..+.|.-.+. -..+....||-...-..+.....|+.|
T Consensus 307 ~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~----------------------~~~i~S~~GHDaFL~e~~~~~~~i~~f 364 (368)
T COG2021 307 APVLVVGITSDWLFPPELQRALAEALPAAGA----------------------LREIDSPYGHDAFLVESEAVGPLIRKF 364 (368)
T ss_pred cCEEEEEecccccCCHHHHHHHHHhccccCc----------------------eEEecCCCCchhhhcchhhhhHHHHHH
Confidence 4567889999999999999999998864432 113445559999988888888999999
Q ss_pred HcC
Q 041833 411 LSG 413 (427)
Q Consensus 411 L~g 413 (427)
|..
T Consensus 365 L~~ 367 (368)
T COG2021 365 LAL 367 (368)
T ss_pred hhc
Confidence 864
No 173
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=66.33 E-value=14 Score=33.89 Aligned_cols=67 Identities=19% Similarity=0.151 Sum_probs=35.5
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHH
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
+.|-|.|++-....+......... --+..|.+|..|+...-..+ -..-.+-++|||||+..+-.-++
T Consensus 62 ~vAvV~WlgYdaP~~~~~~a~~~~----~A~~ga~~L~~f~~gl~a~~--~~~~~~tv~GHSYGS~v~G~A~~ 128 (177)
T PF06259_consen 62 SVAVVAWLGYDAPAGGLPDAASPG----YARAGAPRLARFLDGLRATH--GPDAHLTVVGHSYGSTVVGLAAQ 128 (177)
T ss_pred CeEEEEEcCCCCCCCccccccCch----HHHHHHHHHHHHHHHhhhhc--CCCCCEEEEEecchhHHHHHHhh
Confidence 678888875443321111111111 12344555666655543333 12346999999999976544443
No 174
>PRK14566 triosephosphate isomerase; Provisional
Probab=66.23 E-value=14 Score=36.03 Aligned_cols=61 Identities=25% Similarity=0.452 Sum_probs=44.9
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+.|+++..+|++++...-....+.+=|. |||-.-|.-+..|.... ++.|++||...+++.
T Consensus 188 ~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~~--------dIDG~LVGgASL~~~ 248 (260)
T PRK14566 188 PEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQP--------DVDGGLIGGASLNST 248 (260)
T ss_pred HHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcCC--------CCCeEEechHhcCHH
Confidence 45688999999999864311112234444 99999999999987643 489999999988864
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=65.28 E-value=17 Score=36.52 Aligned_cols=130 Identities=18% Similarity=0.149 Sum_probs=64.7
Q ss_pred CCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCc--eeeC-CCCccccceEEEEeCCCCcccCcCCCCCCCccCChHH
Q 041833 117 SKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKT--LYLN-PYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKR 193 (427)
Q Consensus 117 ~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~--l~~n-~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~ 193 (427)
++.-|+|+.+|..|..- .+...++++-..+... +.-+ -.-+....++--|+ |+|.|.|+-.+...-.. ...
T Consensus 52 ~~ipV~~~l~G~t~~~~---~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~-~~~- 125 (316)
T COG0627 52 RDIPVLYLLSGLTCNEP---NVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPW-ASG- 125 (316)
T ss_pred CCCCEEEEeCCCCCCCC---ceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCcc-ccC-
Confidence 44445555557777741 2234444432222111 1111 22244445555556 58998887543211000 000
Q ss_pred HHHHHHHHHH-----HHHHHccCCCC-CCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 194 TAEDSLKFLL-----KWLERFSQFKG-RDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 194 ~A~d~~~fL~-----~f~~~fp~~~~-~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.-+.+.||. .|.+.||.-+. ..-.|+|+|+||+=+-.+|.+-.++ ++.+.--.|++++.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~----------f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR----------FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch----------hceecccccccccc
Confidence 123333332 34445553322 3688999999998877777754332 55555556666654
No 176
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=62.53 E-value=20 Score=36.41 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=64.8
Q ss_pred CCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChHHH
Q 041833 115 PDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDKRT 194 (427)
Q Consensus 115 p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~ 194 (427)
+.-+-|||...|-- -|.|.|=.. .. ..+. +++|=+..| |.+-|.+.+ ++. ++..+
T Consensus 240 ~ngq~LvIC~EGNA--------GFYEvG~m~--tP-~~lg---------YsvLGwNhP-GFagSTG~P---~p~-n~~nA 294 (517)
T KOG1553|consen 240 GNGQDLVICFEGNA--------GFYEVGVMN--TP-AQLG---------YSVLGWNHP-GFAGSTGLP---YPV-NTLNA 294 (517)
T ss_pred CCCceEEEEecCCc--------cceEeeeec--Ch-HHhC---------ceeeccCCC-CccccCCCC---Ccc-cchHH
Confidence 34467888888763 356666322 00 0122 233444468 888787654 332 56666
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccC
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNA 258 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~ 258 (427)
++.+..|-.+-+ .|+..+++|.|-|-||.-+...|.- .-++|++++-.-
T Consensus 295 ~DaVvQfAI~~L----gf~~edIilygWSIGGF~~~waAs~-----------YPdVkavvLDAt 343 (517)
T KOG1553|consen 295 ADAVVQFAIQVL----GFRQEDIILYGWSIGGFPVAWAASN-----------YPDVKAVVLDAT 343 (517)
T ss_pred HHHHHHHHHHHc----CCCccceEEEEeecCCchHHHHhhc-----------CCCceEEEeecc
Confidence 666665544322 5788899999999999877777762 556888876433
No 177
>PRK14567 triosephosphate isomerase; Provisional
Probab=62.34 E-value=19 Score=34.91 Aligned_cols=61 Identities=18% Similarity=0.351 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+.++++..++++++..+-+-....+-|. |||-.-|.-+..|++.. ++.|++||...+++.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~~--------diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSLP--------DVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcCC--------CCCEEEeehhhhcHH
Confidence 56688899999998875411112233444 99999999999887643 489999999998764
No 178
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=60.98 E-value=2.3e+02 Score=30.78 Aligned_cols=26 Identities=19% Similarity=0.101 Sum_probs=23.0
Q ss_pred eeEEeCCCCcccChhhHHHHHHhcCC
Q 041833 333 FLYDSGDTDAVIPVTSTRYSIDALNL 358 (427)
Q Consensus 333 ~Liy~Gd~D~i~p~~gt~~~i~~L~~ 358 (427)
.+++.|..|.|+|+..+....+.++-
T Consensus 444 vl~va~~~DHIvPw~s~~~~~~l~gs 469 (560)
T TIGR01839 444 SFSVAGTNDHITPWDAVYRSALLLGG 469 (560)
T ss_pred eEEEecCcCCcCCHHHHHHHHHHcCC
Confidence 56999999999999999999887753
No 179
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=60.30 E-value=79 Score=33.97 Aligned_cols=45 Identities=16% Similarity=0.106 Sum_probs=32.6
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHH
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAI 236 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i 236 (427)
|.+++......||++--++||+-. +..|+|.-=||=-+..+|..-
T Consensus 117 Tl~DV~~ae~~Fv~~V~~~hp~~~--kp~liGnCQgGWa~~mlAA~~ 161 (581)
T PF11339_consen 117 TLEDVMRAEAAFVEEVAERHPDAP--KPNLIGNCQGGWAAMMLAALR 161 (581)
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCC--CceEEeccHHHHHHHHHHhcC
Confidence 555666666666666667898764 788999999997777777643
No 180
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=60.23 E-value=9.4 Score=39.32 Aligned_cols=40 Identities=10% Similarity=0.110 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHH
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAI 236 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i 236 (427)
+.+..+...+++-++ ..+++++|+|||+||.++-++-...
T Consensus 101 ~~~~~lk~~ie~~~~----~~~~kv~li~HSmGgl~~~~fl~~~ 140 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYK----KNGKKVVLIAHSMGGLVARYFLQWM 140 (389)
T ss_pred HHHHHHHHHHHHHHH----hcCCcEEEEEeCCCchHHHHHHHhc
Confidence 344455554544433 2377999999999997666555544
No 181
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=60.00 E-value=1.4e+02 Score=32.94 Aligned_cols=133 Identities=15% Similarity=0.172 Sum_probs=79.0
Q ss_pred CCCCC-CeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccc------hhhhHh-hhcccCCHH
Q 041833 211 QFKGR-DFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYL------GLFQFW-WSAGLISDD 282 (427)
Q Consensus 211 ~~~~~-~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~------~~~~f~-~~~glI~~~ 282 (427)
.|..+ .+++.|-|-||+.+-+++.. .+--++||+.--|++|+...+. +..++. |++. .+.+
T Consensus 522 g~~~~~~i~a~GGSAGGmLmGav~N~----------~P~lf~~iiA~VPFVDvltTMlD~slPLT~~E~~EWGNP-~d~e 590 (682)
T COG1770 522 GYTSPDRIVAIGGSAGGMLMGAVANM----------APDLFAGIIAQVPFVDVLTTMLDPSLPLTVTEWDEWGNP-LDPE 590 (682)
T ss_pred CcCCccceEEeccCchhHHHHHHHhh----------ChhhhhheeecCCccchhhhhcCCCCCCCccchhhhCCc-CCHH
Confidence 45544 69999999999766665542 2455899999999999865432 111221 1122 2444
Q ss_pred HHHHHHHhhhccCCCCCchhHHHHHHHHHhhcCCccccc-ccccccccccceeEEeCCCCcccChhhHHHHHHhcCCCCC
Q 041833 283 TYKQLNLLCDYESFVHPSSSCDKVLEVADNELGNIDQYN-RDLLTFLVLFDFLYDSGDTDAVIPVTSTRYSIDALNLPTV 361 (427)
Q Consensus 283 ~~~~l~~~C~~~~~~~~~~~C~~~~~~~~~~~g~in~Yd-i~~p~~lp~i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~ 361 (427)
.++.|+. ..+|+ +.. .++=..|+..|-.|..|++----+|+.+|.--.
T Consensus 591 ~y~yikS---------------------------YSPYdNV~a---~~YP~ilv~~Gl~D~rV~YwEpAKWvAkLR~~~- 639 (682)
T COG1770 591 YYDYIKS---------------------------YSPYDNVEA---QPYPAILVTTGLNDPRVQYWEPAKWVAKLRELK- 639 (682)
T ss_pred HHHHHhh---------------------------cCchhcccc---CCCCceEEEccccCCccccchHHHHHHHHhhcc-
Confidence 4444432 12221 211 111124688999999999998889998885321
Q ss_pred ccceeeeeCCceeeeeeeecC-eEEEEECCCCCcCCcCCcHH
Q 041833 362 KPWRAWYDEGQVGGWTQEYSG-LTFVTVRGAGHEVPLHRPKP 402 (427)
Q Consensus 362 ~~~~~w~~~~~v~Gy~k~y~~-Ltfv~V~gAGHmvP~dqPe~ 402 (427)
+-.+ |-+-+=-.|||---..+.+.
T Consensus 640 -----------------td~~plLlkt~M~aGHgG~SgRf~~ 664 (682)
T COG1770 640 -----------------TDGNPLLLKTNMDAGHGGASGRFQR 664 (682)
T ss_pred -----------------cCCCcEEEEecccccCCCCCCchHH
Confidence 1122 45566688999544444433
No 182
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=58.64 E-value=23 Score=34.83 Aligned_cols=38 Identities=16% Similarity=0.293 Sum_probs=29.5
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCcc
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGH 227 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~ 227 (427)
.-.++++.|++.+.......|+=..=++||.|||-|..
T Consensus 84 ~a~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 84 AAREAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred hHHHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 34567788888888888888876555699999999863
No 183
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=58.18 E-value=13 Score=37.03 Aligned_cols=69 Identities=16% Similarity=0.222 Sum_probs=39.1
Q ss_pred ChHHHHHHHHHHHHHHHHHc-c-CCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccc
Q 041833 190 GDKRTAEDSLKFLLKWLERF-S-QFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~f-p-~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~ 264 (427)
+.++.++|+..+++ +++.. . .+..++|+|+|||=|..=+.++... .+.. .....++|+|+-.|+-|...
T Consensus 82 SL~~D~~eI~~~v~-ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~---~~~~--~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 82 SLDRDVEEIAQLVE-YLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSS---PNPS--PSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp -HHHHHHHHHHHHH-HHHHHS------S-EEEEEECCHHHHHHHHHHH----TT-----CCCEEEEEEEEE---TTS
T ss_pred hhhhHHHHHHHHHH-HHHHhhccccCCccEEEEecCCCcHHHHHHHhc---cCcc--ccccceEEEEEeCCCCChhH
Confidence 77888888888665 44432 1 1456789999999998544443332 2210 11467999999999888754
No 184
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=56.39 E-value=20 Score=37.97 Aligned_cols=72 Identities=24% Similarity=0.266 Sum_probs=50.3
Q ss_pred eEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeec-CeEEEEECCCCCcC--CcCCcHHHHHHHHHH
Q 041833 334 LYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYS-GLTFVTVRGAGHEV--PLHRPKPALTLIKSF 410 (427)
Q Consensus 334 Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~-~Ltfv~V~gAGHmv--P~dqPe~~~~mi~~f 410 (427)
|+|+|-.|.++|..++.++.+++.-.- +|-..... -+.|..|+|.||-. +-..|-.++..|.+|
T Consensus 357 I~~HG~aD~~I~p~~ti~YY~~V~~~~-------------g~~~~~v~dF~RlF~vPGm~HC~gG~g~~~~d~l~aL~~W 423 (474)
T PF07519_consen 357 ILYHGWADPLIPPQGTIDYYERVVARM-------------GGALADVDDFYRLFMVPGMGHCGGGPGPDPFDALTALVDW 423 (474)
T ss_pred EEEecCCCCccCCCcHHHHHHHHHHhc-------------ccccccccceeEEEecCCCcccCCCCCCCCCCHHHHHHHH
Confidence 499999999999999999887763221 11000111 25678999999984 334566789999999
Q ss_pred HcCCCCCC
Q 041833 411 LSGRSMPC 418 (427)
Q Consensus 411 L~g~~l~~ 418 (427)
+++-.-|.
T Consensus 424 VE~G~AP~ 431 (474)
T PF07519_consen 424 VENGKAPE 431 (474)
T ss_pred HhCCCCCC
Confidence 99766554
No 185
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=56.15 E-value=12 Score=36.50 Aligned_cols=62 Identities=15% Similarity=0.216 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHHHHHH----ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 193 RTAEDSLKFLLKWLER----FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~----fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
+.|..+.++|.+=++. .-+-.-.++.++|||-||+.+=.+|..+. ..+++..++-.+|+-..
T Consensus 94 ~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a--------~~lkfsaLIGiDPV~G~ 159 (307)
T PF07224_consen 94 KSAASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYA--------TSLKFSALIGIDPVAGT 159 (307)
T ss_pred HHHHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhccc--------ccCchhheecccccCCC
Confidence 4555555555443332 11122347999999999999888887542 35667788877777544
No 186
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=55.62 E-value=15 Score=41.06 Aligned_cols=93 Identities=24% Similarity=0.301 Sum_probs=52.7
Q ss_pred ceEeecCCCCch-------hHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChH
Q 041833 120 LVLWLNGGPGCS-------SIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDK 192 (427)
Q Consensus 120 l~lWlnGGPG~S-------s~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~ 192 (427)
-||++-|--|+- |.. -.....||++=..+ ..|+++. +---+|- .=-||.-.. .+..
T Consensus 91 PVLFIPGNAGSyKQvRSiAS~a-~n~y~~~~~e~t~~----~d~~~~~----DFFaVDF--nEe~tAm~G------~~l~ 153 (973)
T KOG3724|consen 91 PVLFIPGNAGSYKQVRSIASVA-QNAYQGGPFEKTED----RDNPFSF----DFFAVDF--NEEFTAMHG------HILL 153 (973)
T ss_pred eEEEecCCCCchHHHHHHHHHH-hhhhcCCchhhhhc----ccCcccc----ceEEEcc--cchhhhhcc------HhHH
Confidence 467888877752 332 34456789873222 3455554 2222331 111221110 2567
Q ss_pred HHHHHHHHHHHHHHHH---ccCCC---CCCeEEecCCcCccch
Q 041833 193 RTAEDSLKFLLKWLER---FSQFK---GRDFYISGESYGGHYV 229 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~---fp~~~---~~~~yI~GESYGG~yv 229 (427)
+.++.+.++++.-+.. -++|. ...+.|+||||||..+
T Consensus 154 dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 154 DQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 7777777777765543 34555 4559999999999654
No 187
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=55.57 E-value=19 Score=37.89 Aligned_cols=68 Identities=22% Similarity=0.184 Sum_probs=44.9
Q ss_pred EEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeee---cCeEEEEECCCC---CcCCcCCcHHHHHHHH
Q 041833 335 YDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEY---SGLTFVTVRGAG---HEVPLHRPKPALTLIK 408 (427)
Q Consensus 335 iy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y---~~Ltfv~V~gAG---HmvP~dqPe~~~~mi~ 408 (427)
++.||=|..+|..+. .+.. +|.+++.. -.++ +.+.+ ..+.+....|+- |+-..-.++. ++.|.
T Consensus 378 ~~~~DGDgTVp~~S~-~~c~--~w~g~~~~------~~~~-~~~~~~~~~~~~~~~~~G~~~a~Hv~ilg~~~l-~e~i~ 446 (473)
T KOG2369|consen 378 IFYGDGDGTVPLVSA-SMCA--NWQGKQFN------AGIA-VTREEDKHQPVNLDESHGSSSAEHVDILGDEEL-LEEIL 446 (473)
T ss_pred eeecCCCCccchHHH-Hhhh--hhhccccc------cccc-cccccccCCCccccccCCccchhhhhhccChHH-HHHHH
Confidence 889999999999988 5555 77776432 1122 22332 247788888887 8877766654 56666
Q ss_pred HHHcC
Q 041833 409 SFLSG 413 (427)
Q Consensus 409 ~fL~g 413 (427)
+.+.+
T Consensus 447 k~~~g 451 (473)
T KOG2369|consen 447 KVLLG 451 (473)
T ss_pred HHhcc
Confidence 66654
No 188
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=53.55 E-value=34 Score=32.15 Aligned_cols=61 Identities=25% Similarity=0.329 Sum_probs=46.5
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcH---HHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPK---PALTLI 407 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe---~~~~mi 407 (427)
.+.|+++|..|.++|....+.......-. .....++.+++|....+.+. +++.-+
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~----------------------~~~~~~~~~~~H~~~~~~~~~~~~~~~~~ 290 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARER----------------------PKKLLFVPGGGHIDLYDNPPAVEQALDKL 290 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccC----------------------CceEEEecCCccccccCccHHHHHHHHHH
Confidence 45789999999999999888877655321 23678899999999986655 577777
Q ss_pred HHHHcC
Q 041833 408 KSFLSG 413 (427)
Q Consensus 408 ~~fL~g 413 (427)
.+|+..
T Consensus 291 ~~f~~~ 296 (299)
T COG1073 291 AEFLER 296 (299)
T ss_pred HHHHHH
Confidence 777754
No 189
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=52.99 E-value=20 Score=36.59 Aligned_cols=121 Identities=12% Similarity=0.199 Sum_probs=64.7
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCCeEEc----CCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCCh
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIK----PDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGD 191 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~----~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~ 191 (427)
..+-+++++||= .+-+|=++++.. ..+.....=-.||-..+++ .||-|.. .+.
T Consensus 114 ~~k~vlvFvHGf--------Nntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l--------~~Yn~Dr-------eS~ 170 (377)
T COG4782 114 SAKTVLVFVHGF--------NNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSL--------LGYNYDR-------EST 170 (377)
T ss_pred CCCeEEEEEccc--------CCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCee--------eecccch-------hhh
Confidence 667899999973 444555555531 1111222222344333331 1222211 133
Q ss_pred HHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccc
Q 041833 192 KRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~ 264 (427)
+....++..+|+...+. -...++||..||||.-.+...-+++.-++.. .....++-+++-.|-+|...
T Consensus 171 ~~Sr~aLe~~lr~La~~---~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~--~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 171 NYSRPALERLLRYLATD---KPVKRIYLLAHSMGTWLLMEALRQLAIRADR--PLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred hhhHHHHHHHHHHHHhC---CCCceEEEEEecchHHHHHHHHHHHhccCCc--chhhhhhheEeeCCCCChhh
Confidence 33444555544443332 2245799999999985444444444433321 14667889999999988654
No 190
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=52.51 E-value=31 Score=32.79 Aligned_cols=44 Identities=23% Similarity=0.265 Sum_probs=34.8
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCc
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRP 400 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqP 400 (427)
+.|-+-|+.|.++|..-++..+++..- - .+.....||+||.-.|
T Consensus 165 PSLHi~G~~D~iv~~~~s~~L~~~~~~------------------------a-~vl~HpggH~VP~~~~ 208 (230)
T KOG2551|consen 165 PSLHIFGETDTIVPSERSEQLAESFKD------------------------A-TVLEHPGGHIVPNKAK 208 (230)
T ss_pred CeeEEecccceeecchHHHHHHHhcCC------------------------C-eEEecCCCccCCCchH
Confidence 367889999999999988888875531 1 3778888999998764
No 191
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=52.35 E-value=1.2e+02 Score=32.40 Aligned_cols=70 Identities=19% Similarity=0.169 Sum_probs=49.3
Q ss_pred cceEEEEeCCCCcccCcCCCC-----CCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 163 VANILFLDSPVGVGFSYSNTS-----SDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~-----~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
-|.|+.+|+. =-|.|..... -.+. +.+++-.|+.+|++.--.+|+.-.+.|++.+|-||.| .||..+-
T Consensus 118 gA~v~~lEHR-FYG~S~P~~~~st~nlk~L--Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsG----sLsAW~R 190 (514)
T KOG2182|consen 118 GATVFQLEHR-FYGQSSPIGDLSTSNLKYL--SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSG----SLSAWFR 190 (514)
T ss_pred CCeeEEeeee-ccccCCCCCCCcccchhhh--hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchh----HHHHHHH
Confidence 4788888873 5665543221 1232 6788889999998887778865555599999999999 6666654
Q ss_pred Hh
Q 041833 238 RH 239 (427)
Q Consensus 238 ~~ 239 (427)
+.
T Consensus 191 ~~ 192 (514)
T KOG2182|consen 191 EK 192 (514)
T ss_pred Hh
Confidence 43
No 192
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=52.34 E-value=2.1e+02 Score=31.60 Aligned_cols=51 Identities=16% Similarity=0.154 Sum_probs=34.8
Q ss_pred eeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCC
Q 041833 333 FLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVP 396 (427)
Q Consensus 333 ~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP 396 (427)
.||.++++|.++++.+...|+.+|.-..-.. -++-.++-+-+=.+|||.+=
T Consensus 635 ~lvtta~hD~RV~~~~~~K~vAklre~~~~~-------------~~q~~pvll~i~~~agH~~~ 685 (712)
T KOG2237|consen 635 MLVTTADHDDRVGPLESLKWVAKLREATCDS-------------LKQTNPVLLRIETKAGHGAE 685 (712)
T ss_pred eEEeeccCCCcccccchHHHHHHHHHHhhcc-------------hhcCCCEEEEEecCCccccC
Confidence 4699999999999999999998885321100 00223355566678999863
No 193
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=52.23 E-value=68 Score=33.44 Aligned_cols=93 Identities=17% Similarity=0.144 Sum_probs=61.2
Q ss_pred cCCCCCCceEeecCCCCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCCCcccCcCCCCCCCccCChH
Q 041833 113 EDPDSKPLVLWLNGGPGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYSNTSSDITTNGDK 192 (427)
Q Consensus 113 ~~p~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~ 192 (427)
+...++|+||...|= ++. ..|.+ .+-+=.-.+|.|+||+. =-|-|...+ .++..-|..
T Consensus 58 Hk~~drPtV~~T~GY--------~~~--~~p~r----------~Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~ 115 (448)
T PF05576_consen 58 HKDFDRPTVLYTEGY--------NVS--TSPRR----------SEPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIW 115 (448)
T ss_pred EcCCCCCeEEEecCc--------ccc--cCccc----------cchhHhhccceEEEEEe-eccCCCCCC-CCcccccHh
Confidence 345678999998863 221 12322 11111224799999974 566666543 344434899
Q ss_pred HHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHH
Q 041833 193 RTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQ 231 (427)
Q Consensus 193 ~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~ 231 (427)
++|.|....++.|-.. |. .+++-+|-|=||+...+
T Consensus 116 QAA~D~Hri~~A~K~i---Y~-~kWISTG~SKGGmTa~y 150 (448)
T PF05576_consen 116 QAASDQHRIVQAFKPI---YP-GKWISTGGSKGGMTAVY 150 (448)
T ss_pred HhhHHHHHHHHHHHhh---cc-CCceecCcCCCceeEEE
Confidence 9999999988888554 43 37999999999976533
No 194
>PLN02606 palmitoyl-protein thioesterase
Probab=52.17 E-value=1.8e+02 Score=29.04 Aligned_cols=35 Identities=20% Similarity=0.345 Sum_probs=27.0
Q ss_pred cCeEEEEECCCCCcCCcCCcHHHHHHHHHHHcCCCCCC
Q 041833 381 SGLTFVTVRGAGHEVPLHRPKPALTLIKSFLSGRSMPC 418 (427)
Q Consensus 381 ~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~fL~g~~l~~ 418 (427)
+.|.|.+|+| .||-- ..+-..+.|..||.++.-..
T Consensus 266 Gkl~f~~v~G-~Hl~~--~~~~~~~~i~pyL~~~~~~~ 300 (306)
T PLN02606 266 GKVKFISVPG-GHIEI--AEEDLVKYVVPYLQNESAFM 300 (306)
T ss_pred CCeEEEecCC-chhee--cHHHHHHHHHHHhccCCccc
Confidence 3599999999 99965 45677788888998765443
No 195
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=51.24 E-value=55 Score=34.93 Aligned_cols=25 Identities=28% Similarity=0.485 Sum_probs=17.6
Q ss_pred ccCCCC--CCeEEecCCcCccchHHHH
Q 041833 209 FSQFKG--RDFYISGESYGGHYVPQLS 233 (427)
Q Consensus 209 fp~~~~--~~~yI~GESYGG~yvP~lA 233 (427)
.+.|.+ +++-|+|||.||..|-.+.
T Consensus 187 I~~FGGdp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 187 IPSFGGDPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHhcCCCCCeEEEEeechhHHHHHHHh
Confidence 334544 4599999999997775543
No 196
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=49.56 E-value=1.3e+02 Score=29.51 Aligned_cols=33 Identities=24% Similarity=0.241 Sum_probs=19.3
Q ss_pred HHHHHHHHHHHHccCCCCCCeEEecCCcCccch
Q 041833 197 DSLKFLLKWLERFSQFKGRDFYISGESYGGHYV 229 (427)
Q Consensus 197 d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yv 229 (427)
.+.+-|+=|.+.-=+....+-.|+||||||..+
T Consensus 119 fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfv 151 (264)
T COG2819 119 FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFV 151 (264)
T ss_pred HHHHhhHHHHhcccccCcccceeeeecchhHHH
Confidence 333334445444112334468999999999554
No 197
>KOG3101 consensus Esterase D [General function prediction only]
Probab=47.58 E-value=17 Score=34.50 Aligned_cols=42 Identities=19% Similarity=0.154 Sum_probs=24.8
Q ss_pred CCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 212 FKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 212 ~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
+-..++-|+|||+|||=+-.++.+ | +-..|++-.-.|..+|.
T Consensus 138 ld~~k~~IfGHSMGGhGAl~~~Lk----n------~~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 138 LDPLKVGIFGHSMGGHGALTIYLK----N------PSKYKSVSAFAPICNPI 179 (283)
T ss_pred ccchhcceeccccCCCceEEEEEc----C------cccccceeccccccCcc
Confidence 334468999999999754444332 1 22455666555555554
No 198
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=46.97 E-value=31 Score=32.31 Aligned_cols=58 Identities=17% Similarity=0.084 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 195 AEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 195 A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+.+.+-|..|++. ++-...+ ..|+|.|+||.-+-.+|.+- +-.+.+++..+|.+++.
T Consensus 95 ~~~l~~el~p~i~~~~~~~~~~-~~i~G~S~GG~~Al~~~l~~----------Pd~F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 95 ETFLTEELIPYIEANYRTDPDR-RAIAGHSMGGYGALYLALRH----------PDLFGAVIAFSGALDPS 153 (251)
T ss_dssp HHHHHTHHHHHHHHHSSEEECC-EEEEEETHHHHHHHHHHHHS----------TTTESEEEEESEESETT
T ss_pred ceehhccchhHHHHhcccccce-eEEeccCCCcHHHHHHHHhC----------ccccccccccCcccccc
Confidence 33444444455543 3323233 89999999996555555532 44478888888887765
No 199
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=46.82 E-value=11 Score=34.76 Aligned_cols=18 Identities=33% Similarity=0.682 Sum_probs=14.9
Q ss_pred CCCCceEeecCCCCchhH
Q 041833 116 DSKPLVLWLNGGPGCSSI 133 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~ 133 (427)
..+|-|+|+-|||||.--
T Consensus 5 ~~~~~IifVlGGPGsgKg 22 (195)
T KOG3079|consen 5 LDKPPIIFVLGGPGSGKG 22 (195)
T ss_pred ccCCCEEEEEcCCCCCcc
Confidence 467999999999998643
No 200
>PLN02429 triosephosphate isomerase
Probab=44.41 E-value=50 Score=33.08 Aligned_cols=61 Identities=21% Similarity=0.339 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+.++.+..++++|+.. +.+-....+-|. |||-.-|.-+..+... .++.|+++|...+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~--------~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE--------EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC--------CCCCEEEeecceecHH
Confidence 45688888999998864 322222344444 9999999988887653 4589999999998754
No 201
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=42.55 E-value=46 Score=31.65 Aligned_cols=56 Identities=14% Similarity=0.218 Sum_probs=32.9
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCc
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNAL 259 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~ 259 (427)
+..+.+..++..+.. ..+...+||+.|||||- +...++++... .-.+-.|++.+..
T Consensus 171 t~veh~~yvw~~~v~------pa~~~sv~vvahsyGG~----~t~~l~~~f~~----d~~v~aialTDs~ 226 (297)
T KOG3967|consen 171 TPVEHAKYVWKNIVL------PAKAESVFVVAHSYGGS----LTLDLVERFPD----DESVFAIALTDSA 226 (297)
T ss_pred chHHHHHHHHHHHhc------ccCcceEEEEEeccCCh----hHHHHHHhcCC----ccceEEEEeeccc
Confidence 566667766655442 24456899999999994 44444444321 1335555555544
No 202
>PF07389 DUF1500: Protein of unknown function (DUF1500); InterPro: IPR009974 This family consists of several Orthopoxvirus specific proteins, which include Vaccinia virus, B6 protein, they are around 100 residues in length. The function of this family is unknown.
Probab=42.31 E-value=21 Score=28.69 Aligned_cols=36 Identities=22% Similarity=0.330 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHh
Q 041833 196 EDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRH 239 (427)
Q Consensus 196 ~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~ 239 (427)
-|+|++.+.|+-+| |-.++|.+-|+|| .+-+.|.+.
T Consensus 7 vdIYDAvRaflLr~--Y~~KrfIV~g~S~------~IlhNIyrl 42 (100)
T PF07389_consen 7 VDIYDAVRAFLLRH--YYDKRFIVYGRSN------AILHNIYRL 42 (100)
T ss_pred hhHHHHHHHHHHHH--HccceEEEecchH------HHHHHHHHH
Confidence 36788888888885 7788999999999 455555554
No 203
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=42.30 E-value=57 Score=33.16 Aligned_cols=62 Identities=16% Similarity=0.117 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccC
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTD 261 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id 261 (427)
|+..-..|-+.+.... ...||+-|+|+|.|+..+=+--..+.+++ ...+--.-+++|.|...
T Consensus 201 A~~aG~~LA~~L~~~~-~G~RpVtLvG~SLGarvI~~cL~~L~~~~----~~~lVe~VvL~Gapv~~ 262 (345)
T PF05277_consen 201 AEKAGKVLADALLSRN-QGERPVTLVGHSLGARVIYYCLLELAERK----AFGLVENVVLMGAPVPS 262 (345)
T ss_pred HHHHHHHHHHHHHHhc-CCCCceEEEeecccHHHHHHHHHHHHhcc----ccCeEeeEEEecCCCCC
Confidence 3333344444444333 37889999999999987777666666653 23343344556766644
No 204
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=41.92 E-value=20 Score=39.02 Aligned_cols=22 Identities=23% Similarity=0.306 Sum_probs=18.2
Q ss_pred CCCeEEecCCcCccchHHHHHH
Q 041833 214 GRDFYISGESYGGHYVPQLSKA 235 (427)
Q Consensus 214 ~~~~yI~GESYGG~yvP~lA~~ 235 (427)
+++++|+||||||.++-+|-..
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5799999999999877776553
No 205
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=40.84 E-value=3.8e+02 Score=29.43 Aligned_cols=229 Identities=17% Similarity=0.138 Sum_probs=121.5
Q ss_pred CCeeEEEEEEeeccCCCCCCceEeecCC------CCchhHhhhhhhhcCCeEEcCCCCceeeCCCCccccceEEEEeCCC
Q 041833 100 SGRALFYWFVEAVEDPDSKPLVLWLNGG------PGCSSIAYGEAEEIGPFHIKPDGKTLYLNPYSWNQVANILFLDSPV 173 (427)
Q Consensus 100 ~~~~lFy~f~es~~~p~~~Pl~lWlnGG------PG~Ss~~~g~~~e~GP~~~~~~~~~l~~n~~sW~~~anvlfiDqP~ 173 (427)
.|.++-|..+-.....+..|++|.=-|| |+-|... -++.|.|=..+-.+-..=-.---.|++ +
T Consensus 403 DGT~IPYFiv~K~~~~d~~pTll~aYGGF~vsltP~fs~~~-~~WLerGg~~v~ANIRGGGEfGp~WH~----------A 471 (648)
T COG1505 403 DGTRIPYFIVRKGAKKDENPTLLYAYGGFNISLTPRFSGSR-KLWLERGGVFVLANIRGGGEFGPEWHQ----------A 471 (648)
T ss_pred CCccccEEEEecCCcCCCCceEEEeccccccccCCccchhh-HHHHhcCCeEEEEecccCCccCHHHHH----------H
Confidence 3566666555422234478999998898 5666665 667777665543211000011112332 1
Q ss_pred CcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCC-CCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecce
Q 041833 174 GVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQF-KGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKG 252 (427)
Q Consensus 174 G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~-~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkG 252 (427)
|.+ .+-..+.+|+.+.++...++ .+ ..+.+-|.|-|=||-.+-.... +.+--+-.
T Consensus 472 a~k------------~nrq~vfdDf~AVaedLi~r--gitspe~lgi~GgSNGGLLvg~alT----------QrPelfgA 527 (648)
T COG1505 472 GMK------------ENKQNVFDDFIAVAEDLIKR--GITSPEKLGIQGGSNGGLLVGAALT----------QRPELFGA 527 (648)
T ss_pred Hhh------------hcchhhhHHHHHHHHHHHHh--CCCCHHHhhhccCCCCceEEEeeec----------cChhhhCc
Confidence 222 14456778888888776665 23 2446889999999966533221 22444666
Q ss_pred eeeccCccCcccccchhhhHhhhcccCCHHHHHHHHHhhhccCCCCCch-hHHHHHHHHHhhcCCccccccccccccccc
Q 041833 253 YMVGNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNLLCDYESFVHPSS-SCDKVLEVADNELGNIDQYNRDLLTFLVLF 331 (427)
Q Consensus 253 i~ign~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~~C~~~~~~~~~~-~C~~~~~~~~~~~g~in~Ydi~~p~~lp~i 331 (427)
+++.-|++|... |..+......+.+ ++. +... .|. .+.. ..+|+-..+ ...+=
T Consensus 528 ~v~evPllDMlR----Yh~l~aG~sW~~E-----------YG~--Pd~P~d~~-~l~~-------YSPy~nl~~-g~kYP 581 (648)
T COG1505 528 AVCEVPLLDMLR----YHLLTAGSSWIAE-----------YGN--PDDPEDRA-FLLA-------YSPYHNLKP-GQKYP 581 (648)
T ss_pred eeeccchhhhhh----hcccccchhhHhh-----------cCC--CCCHHHHH-HHHh-------cCchhcCCc-cccCC
Confidence 777778877543 1112111111100 111 1111 222 1111 122221111 01112
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCcCCcHHHHHHHHH
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPLHRPKPALTLIKS 409 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~dqPe~~~~mi~~ 409 (427)
..||..+.+|-.|-...++.+...|.-.+. +.+ |..=.++||+.--++-+.+.+....
T Consensus 582 ~~LITTs~~DDRVHPaHarKfaa~L~e~~~-------------------pv~-~~e~t~gGH~g~~~~~~~A~~~a~~ 639 (648)
T COG1505 582 PTLITTSLHDDRVHPAHARKFAAKLQEVGA-------------------PVL-LREETKGGHGGAAPTAEIARELADL 639 (648)
T ss_pred CeEEEcccccccccchHHHHHHHHHHhcCC-------------------ceE-EEeecCCcccCCCChHHHHHHHHHH
Confidence 368999999999999999998877742221 111 2333467999988887766655443
No 206
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=40.61 E-value=44 Score=30.43 Aligned_cols=84 Identities=11% Similarity=0.188 Sum_probs=49.2
Q ss_pred eEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcC
Q 041833 165 NILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATG 244 (427)
Q Consensus 165 nvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~ 244 (427)
.+--|+-|+..+.. .|. .+...-+.++...|+++..+-| +.+|+|+|-|=|++.+-..+.. .....
T Consensus 41 ~~~~V~YpA~~~~~------~y~-~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~----~~l~~ 106 (179)
T PF01083_consen 41 AVQGVEYPASLGPN------SYG-DSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSG----DGLPP 106 (179)
T ss_dssp EEEE--S---SCGG------SCH-HHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHH----TTSSH
T ss_pred EEEecCCCCCCCcc------ccc-ccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHh----ccCCh
Confidence 44446677666652 122 1566777888888888888877 4589999999999766555544 10000
Q ss_pred Ccceecce-eeeccCccCc
Q 041833 245 EKAINLKG-YMVGNALTDD 262 (427)
Q Consensus 245 ~~~inLkG-i~ign~~id~ 262 (427)
...-++.+ +.+|||.-..
T Consensus 107 ~~~~~I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 107 DVADRIAAVVLFGDPRRGA 125 (179)
T ss_dssp HHHHHEEEEEEES-TTTBT
T ss_pred hhhhhEEEEEEecCCcccC
Confidence 12344666 4678888643
No 207
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=40.24 E-value=37 Score=32.34 Aligned_cols=43 Identities=19% Similarity=0.182 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHH
Q 041833 191 DKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 191 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
..+...|+.+++ .|+...|+....++.++|-|+||+.+-.+|.
T Consensus 89 ~~~~~~d~~a~~-~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~ 131 (236)
T COG0412 89 PAEVLADIDAAL-DYLARQPQVDPKRIGVVGFCMGGGLALLAAT 131 (236)
T ss_pred HHHHHHHHHHHH-HHHHhCCCCCCceEEEEEEcccHHHHHHhhc
Confidence 356667777755 4777777777778999999999976666655
No 208
>PLN02561 triosephosphate isomerase
Probab=40.10 E-value=62 Score=31.43 Aligned_cols=76 Identities=24% Similarity=0.354 Sum_probs=51.3
Q ss_pred eEEEEeCC--CCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhh
Q 041833 165 NILFLDSP--VGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 241 (427)
Q Consensus 165 nvlfiDqP--~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~ 241 (427)
-+|-.+++ +|+|.+- ..+.++++..++++++.. +..-....+-|. |||-.-|.-+..+...
T Consensus 161 iiIAYEPvWAIGtG~~a-----------s~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~-- 224 (253)
T PLN02561 161 VVLAYEPVWAIGTGKVA-----------TPAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ-- 224 (253)
T ss_pred eEEEECCHHHhCCCCCC-----------CHHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC--
Confidence 34666643 4566541 234578888889888753 322223345454 9999999998887653
Q ss_pred hcCCcceecceeeeccCccCc
Q 041833 242 ATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 242 ~~~~~~inLkGi~ign~~id~ 262 (427)
.++.|+++|...+|+
T Consensus 225 ------~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 225 ------PDVDGFLVGGASLKP 239 (253)
T ss_pred ------CCCCeEEEehHhhHH
Confidence 459999999999885
No 209
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=39.99 E-value=36 Score=36.82 Aligned_cols=83 Identities=23% Similarity=0.229 Sum_probs=57.5
Q ss_pred cceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 163 VANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 163 ~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
=+-+|..|- +|.|.|.+.-...+ + +-++|-++ +.+|+.+-|-. +-++-..|-||+|.-.-++|.
T Consensus 80 GYavV~qDv-RG~~~SeG~~~~~~---~--~E~~Dg~D-~I~Wia~QpWs-NG~Vgm~G~SY~g~tq~~~Aa-------- 143 (563)
T COG2936 80 GYAVVNQDV-RGRGGSEGVFDPES---S--REAEDGYD-TIEWLAKQPWS-NGNVGMLGLSYLGFTQLAAAA-------- 143 (563)
T ss_pred ceEEEEecc-cccccCCcccceec---c--ccccchhH-HHHHHHhCCcc-CCeeeeecccHHHHHHHHHHh--------
Confidence 367888997 59999998744221 3 34556666 44577776644 458999999999966555554
Q ss_pred cCCcceecceeeeccCccCcc
Q 041833 243 TGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~~ 263 (427)
..+-.||.|+.--+..|..
T Consensus 144 --~~pPaLkai~p~~~~~D~y 162 (563)
T COG2936 144 --LQPPALKAIAPTEGLVDRY 162 (563)
T ss_pred --cCCchheeecccccccccc
Confidence 2256689888887777753
No 210
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=39.42 E-value=79 Score=33.55 Aligned_cols=56 Identities=16% Similarity=0.246 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCccc
Q 041833 195 AEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYH 264 (427)
Q Consensus 195 A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~ 264 (427)
+.--.+.++.|+.+-|++ =|..|.|=||+=+...|++..+ ...||+.+.|.++...
T Consensus 99 ~~~aK~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~----------dfDGIlAgaPA~~~~~ 154 (474)
T PF07519_consen 99 TVVAKALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPE----------DFDGILAGAPAINWTH 154 (474)
T ss_pred HHHHHHHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChh----------hcCeEEeCCchHHHHH
Confidence 333345566676665544 7999999999999999986654 4889999999988644
No 211
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=38.94 E-value=18 Score=37.11 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=21.0
Q ss_pred CeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 216 DFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 216 ~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
++.++||||||.-+-..+. + ...++..++.+||.-|.
T Consensus 229 ~i~~~GHSFGGATa~~~l~----~-------d~r~~~~I~LD~W~~Pl 265 (379)
T PF03403_consen 229 RIGLAGHSFGGATALQALR----Q-------DTRFKAGILLDPWMFPL 265 (379)
T ss_dssp EEEEEEETHHHHHHHHHHH----H--------TT--EEEEES---TTS
T ss_pred heeeeecCchHHHHHHHHh----h-------ccCcceEEEeCCcccCC
Confidence 5999999999954433222 1 13467888888887664
No 212
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=38.39 E-value=57 Score=32.34 Aligned_cols=18 Identities=22% Similarity=0.595 Sum_probs=14.9
Q ss_pred CCCCCCeEEecCCcCccc
Q 041833 211 QFKGRDFYISGESYGGHY 228 (427)
Q Consensus 211 ~~~~~~~yI~GESYGG~y 228 (427)
.|....+.++|||-||..
T Consensus 272 ~Ypda~iwlTGHSLGGa~ 289 (425)
T COG5153 272 IYPDARIWLTGHSLGGAI 289 (425)
T ss_pred hCCCceEEEeccccchHH
Confidence 466778999999999943
No 213
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=38.39 E-value=57 Score=32.34 Aligned_cols=18 Identities=22% Similarity=0.595 Sum_probs=14.9
Q ss_pred CCCCCCeEEecCCcCccc
Q 041833 211 QFKGRDFYISGESYGGHY 228 (427)
Q Consensus 211 ~~~~~~~yI~GESYGG~y 228 (427)
.|....+.++|||-||..
T Consensus 272 ~Ypda~iwlTGHSLGGa~ 289 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAI 289 (425)
T ss_pred hCCCceEEEeccccchHH
Confidence 466778999999999943
No 214
>COG3150 Predicted esterase [General function prediction only]
Probab=38.15 E-value=51 Score=30.14 Aligned_cols=58 Identities=19% Similarity=0.222 Sum_probs=39.3
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcccccc
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDYHDYL 267 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~~~~~ 267 (427)
...++++.+...++ ++.++...|+|-|-||-|+-.|+. +. -|+. +|.||.+.|.....
T Consensus 41 ~p~~a~~ele~~i~-------~~~~~~p~ivGssLGGY~At~l~~----~~--------Gira-v~~NPav~P~e~l~ 98 (191)
T COG3150 41 DPQQALKELEKAVQ-------ELGDESPLIVGSSLGGYYATWLGF----LC--------GIRA-VVFNPAVRPYELLT 98 (191)
T ss_pred CHHHHHHHHHHHHH-------HcCCCCceEEeecchHHHHHHHHH----Hh--------CChh-hhcCCCcCchhhhh
Confidence 56677777777776 577778999999999955444444 32 1333 36788888876543
No 215
>PLN03082 Iron-sulfur cluster assembly; Provisional
Probab=37.34 E-value=17 Score=32.87 Aligned_cols=63 Identities=22% Similarity=0.326 Sum_probs=45.2
Q ss_pred CCCCceEeecCCCCchhHhhhhhhhcCC----eEEcCCCCceeeCCCC--ccccceEEEEeCCCCcccCc
Q 041833 116 DSKPLVLWLNGGPGCSSIAYGEAEEIGP----FHIKPDGKTLYLNPYS--WNQVANILFLDSPVGVGFSY 179 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG~Ss~~~g~~~e~GP----~~~~~~~~~l~~n~~s--W~~~anvlfiDqP~G~GfSy 179 (427)
...+|=|-+.|| |||.+.|.+-.+.-| ..+..+|-++...+.+ +.+-+.|=|+|...|.||-.
T Consensus 76 ~~~~LRl~V~~g-GCSG~~Y~~~ld~~~~~~D~v~e~~Gv~vvVD~~s~~~L~Gs~IDYve~l~~~gF~f 144 (163)
T PLN03082 76 EDKMLRLSVETG-GCSGFQYVFELDDKTNSDDRVFEKDGVKLVVDNISYDFVKGATVDYVEELIRSAFVV 144 (163)
T ss_pred CCceEEEEEecC-CCCCceeeeEEccCCCCCCEEEecCCeEEEECHHHHHHhCCCEEEeecCCCCCeeEE
Confidence 346788999988 999998666554322 4455566666666655 44667888999998999877
No 216
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=36.94 E-value=89 Score=30.06 Aligned_cols=74 Identities=20% Similarity=0.433 Sum_probs=50.5
Q ss_pred EEEEeCC--CCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 166 ILFLDSP--VGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 166 vlfiDqP--~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
+|-.+++ +|+|.+- ..+.+.++..++++++.. +.+ ....+-|. |||-.-|.-+..+.+..
T Consensus 158 iIAYEPvWAIGtG~~a-----------s~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~-- 220 (242)
T cd00311 158 VIAYEPVWAIGTGKTA-----------SPEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP-- 220 (242)
T ss_pred EEEECCHHHhCCCCCC-----------CHHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC--
Confidence 4666643 4666531 234578888889988864 322 23344444 99999998888887643
Q ss_pred cCCcceecceeeeccCccCc
Q 041833 243 TGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~ 262 (427)
++.|+++|...+++
T Consensus 221 ------~vDG~LVG~Asl~~ 234 (242)
T cd00311 221 ------DIDGVLVGGASLKA 234 (242)
T ss_pred ------CCCEEEeehHhhCH
Confidence 48999999998874
No 217
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=36.16 E-value=24 Score=36.23 Aligned_cols=59 Identities=27% Similarity=0.455 Sum_probs=32.9
Q ss_pred CCCCceEeecCCCC--chhHhhhhhhhcCCeEEcC--C---CCceeeCCCCccccceEEEEeCCCCcc
Q 041833 116 DSKPLVLWLNGGPG--CSSIAYGEAEEIGPFHIKP--D---GKTLYLNPYSWNQVANILFLDSPVGVG 176 (427)
Q Consensus 116 ~~~Pl~lWlnGGPG--~Ss~~~g~~~e~GP~~~~~--~---~~~l~~n~~sW~~~anvlfiDqP~G~G 176 (427)
++.|+=|-+.|-+| -||++ -++-.+|+=.-.. - ..+....+|.--+.-||.+||.| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSfI-NalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSFI-NALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHHH-HHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHHH-HHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 35678888889665 58887 7787776621100 0 02344555555688999999999 888
No 218
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=35.68 E-value=63 Score=33.57 Aligned_cols=49 Identities=14% Similarity=0.312 Sum_probs=39.7
Q ss_pred CChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhh
Q 041833 189 NGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHN 240 (427)
Q Consensus 189 ~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~ 240 (427)
.+.++.|.|+-..++ |+.+ +++.+++.++|-|+|.-..|..-.++....
T Consensus 303 rtPe~~a~Dl~r~i~-~y~~--~w~~~~~~liGySfGADvlP~~~n~L~~~~ 351 (456)
T COG3946 303 RTPEQIAADLSRLIR-FYAR--RWGAKRVLLIGYSFGADVLPFAYNRLPPAT 351 (456)
T ss_pred CCHHHHHHHHHHHHH-HHHH--hhCcceEEEEeecccchhhHHHHHhCCHHH
Confidence 478899999998655 5554 488899999999999999998887776544
No 219
>COG3673 Uncharacterized conserved protein [Function unknown]
Probab=32.27 E-value=40 Score=33.94 Aligned_cols=68 Identities=26% Similarity=0.414 Sum_probs=41.3
Q ss_pred cceEEEEeCCCCcc-cCcCCC----------CCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHH
Q 041833 163 VANILFLDSPVGVG-FSYSNT----------SSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQ 231 (427)
Q Consensus 163 ~anvlfiDqP~G~G-fSy~~~----------~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~ 231 (427)
...|+|.|+-||+| |--... .+-+- .+.++-....|.||...++ -+..||++|-|=|.-.+-.
T Consensus 65 ~~qv~yYd~GVGt~Gfdavvdvrrrl~~~~~gsmFg-~gL~~nI~~AYrFL~~~ye-----pGD~Iy~FGFSRGAf~aRV 138 (423)
T COG3673 65 VTQVIYYDEGVGTGGFDAVVDVRRRLEKLSGGSMFG-QGLVQNIREAYRFLIFNYE-----PGDEIYAFGFSRGAFSARV 138 (423)
T ss_pred ceEEEEecCCcccccchhhHHHHHhhhhhhhHHHHH-HHHHHHHHHHHHHHHHhcC-----CCCeEEEeeccchhHHHHH
Confidence 45789999988876 211100 00111 1455666777787775432 1446999999998766666
Q ss_pred HHHHH
Q 041833 232 LSKAI 236 (427)
Q Consensus 232 lA~~i 236 (427)
||..|
T Consensus 139 lagmi 143 (423)
T COG3673 139 LAGMI 143 (423)
T ss_pred HHHHH
Confidence 66554
No 220
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=31.51 E-value=1.3e+02 Score=29.17 Aligned_cols=76 Identities=18% Similarity=0.343 Sum_probs=51.4
Q ss_pred eEEEEeCC--CCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhh
Q 041833 165 NILFLDSP--VGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQ 241 (427)
Q Consensus 165 nvlfiDqP--~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~ 241 (427)
.+|-.+++ +|+|.+ -..+.++++..++++++.. +. -...++-|. |||-.-|.-+..+...
T Consensus 161 ~vIAYEPvWAIGtG~~-----------as~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~-- 223 (250)
T PRK00042 161 LVIAYEPVWAIGTGKT-----------ATPEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ-- 223 (250)
T ss_pred EEEEECCHHHhCCCCC-----------CCHHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC--
Confidence 35667754 466654 1245688888999998863 32 112334444 9999999998887653
Q ss_pred hcCCcceecceeeeccCccCcc
Q 041833 242 ATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 242 ~~~~~~inLkGi~ign~~id~~ 263 (427)
.++.|+++|...+++.
T Consensus 224 ------~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 224 ------PDIDGALVGGASLKAE 239 (250)
T ss_pred ------CCCCEEEEeeeeechH
Confidence 4589999999988753
No 221
>PRK14565 triosephosphate isomerase; Provisional
Probab=30.97 E-value=97 Score=29.77 Aligned_cols=69 Identities=17% Similarity=0.220 Sum_probs=48.0
Q ss_pred eEEEEeCC--CCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHHHhhhh
Q 041833 165 NILFLDSP--VGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQA 242 (427)
Q Consensus 165 nvlfiDqP--~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~ 242 (427)
-+|-.|++ +|+|.. -+.+.++++..+++++. .++-|. |||-.-|.-+..+...
T Consensus 155 ivIAYEPvWAIGtG~~-----------a~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~--- 209 (237)
T PRK14565 155 FIIAYEPVWAIGGSTI-----------PSNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI--- 209 (237)
T ss_pred EEEEECCHHHhCCCCC-----------CCHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC---
Confidence 56667754 355542 23456888888888762 133333 9999999999888763
Q ss_pred cCCcceecceeeeccCccCcc
Q 041833 243 TGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 243 ~~~~~inLkGi~ign~~id~~ 263 (427)
.++.|+++|...+++.
T Consensus 210 -----~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 210 -----NQLSGVLVGSASLDVD 225 (237)
T ss_pred -----CCCCEEEEechhhcHH
Confidence 3489999999998764
No 222
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=30.57 E-value=65 Score=29.37 Aligned_cols=26 Identities=19% Similarity=0.411 Sum_probs=21.0
Q ss_pred CCCCCCeEEecCCcCccchHHHHHHH
Q 041833 211 QFKGRDFYISGESYGGHYVPQLSKAI 236 (427)
Q Consensus 211 ~~~~~~~yI~GESYGG~yvP~lA~~i 236 (427)
.+..-|++|-|+||||.....+|..+
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~ 110 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADEL 110 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhh
Confidence 45666999999999998777777654
No 223
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=30.47 E-value=60 Score=32.67 Aligned_cols=45 Identities=13% Similarity=0.118 Sum_probs=32.8
Q ss_pred ChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCccchHHHHHHHH
Q 041833 190 GDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGHYVPQLSKAII 237 (427)
Q Consensus 190 ~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~yvP~lA~~i~ 237 (427)
+....++++...+.+.+.. ...+++.|.|||.||..+.+++..+.
T Consensus 105 ~~~~~~~ql~~~V~~~l~~---~ga~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 105 SLAVRGEQLFAYVDEVLAK---TGAKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred cccccHHHHHHHHHHHHhh---cCCCceEEEeecccchhhHHHHhhcC
Confidence 4455677777777766554 44579999999999988887666543
No 224
>PTZ00333 triosephosphate isomerase; Provisional
Probab=29.17 E-value=1.2e+02 Score=29.46 Aligned_cols=60 Identities=25% Similarity=0.455 Sum_probs=43.0
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCc
Q 041833 192 KRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDD 262 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~ 262 (427)
.+.++++..++++++.. +.......+-|. |||-.-|.-+..+... .++.|++||...+++
T Consensus 182 ~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~--------~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 182 PEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ--------PDIDGFLVGGASLKP 242 (255)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC--------CCCCEEEEehHhhhh
Confidence 45688888899988763 322222334444 9999999999888653 458999999988873
No 225
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=27.89 E-value=7.2e+02 Score=26.17 Aligned_cols=27 Identities=15% Similarity=0.118 Sum_probs=22.7
Q ss_pred ceeEEeCCCCcccChhhHHHHHHhcCC
Q 041833 332 DFLYDSGDTDAVIPVTSTRYSIDALNL 358 (427)
Q Consensus 332 ~~Liy~Gd~D~i~p~~gt~~~i~~L~~ 358 (427)
.++.++|..|.|+|+.+.....+.++-
T Consensus 332 pvy~~a~~~DhI~P~~Sv~~g~~l~~g 358 (445)
T COG3243 332 PVYNLAAEEDHIAPWSSVYLGARLLGG 358 (445)
T ss_pred ceEEEeecccccCCHHHHHHHHHhcCC
Confidence 366999999999999998888777754
No 226
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=27.78 E-value=5e+02 Score=24.13 Aligned_cols=61 Identities=15% Similarity=0.165 Sum_probs=44.3
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcCCCCCccceeeeeCCceeeeeeeecCeEEEEECCCCCcCCc-CCcHHHHHHHHH
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALNLPTVKPWRAWYDEGQVGGWTQEYSGLTFVTVRGAGHEVPL-HRPKPALTLIKS 409 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~~~~~~~~~~w~~~~~v~Gy~k~y~~Ltfv~V~gAGHmvP~-dqPe~~~~mi~~ 409 (427)
.+.|.+..+.|.+|++...++.++...-.|. ..+-..+.+++|-.++ ..|++=...+.+
T Consensus 179 ~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~--------------------~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~ 238 (240)
T PF05705_consen 179 CPRLYLYSKADPLIPWRDVEEHAEEARRKGW--------------------DVRAEKFEDSPHVAHLRKHPDRYWRAVDE 238 (240)
T ss_pred CCeEEecCCCCcCcCHHHHHHHHHHHHHcCC--------------------eEEEecCCCCchhhhcccCHHHHHHHHHh
Confidence 4568888899999999999998875532221 1345667889888776 458887777777
Q ss_pred HH
Q 041833 410 FL 411 (427)
Q Consensus 410 fL 411 (427)
|+
T Consensus 239 fw 240 (240)
T PF05705_consen 239 FW 240 (240)
T ss_pred hC
Confidence 63
No 227
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=27.59 E-value=1.1e+02 Score=33.97 Aligned_cols=61 Identities=20% Similarity=0.352 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHHH-ccCCCCCCeEEecCCcCccchHHHHHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 192 KRTAEDSLKFLLKWLER-FSQFKGRDFYISGESYGGHYVPQLSKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 192 ~~~A~d~~~fL~~f~~~-fp~~~~~~~yI~GESYGG~yvP~lA~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
.+.++++..++++++.. +-.-....+-|. |||-.-|.-+..|... -++.|++||...+++.
T Consensus 574 ~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~--------~diDG~LVGgASL~~~ 635 (645)
T PRK13962 574 PEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ--------PDIDGGLVGGASLKAQ 635 (645)
T ss_pred HHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC--------CCCCeEEeehHhcCHH
Confidence 46788899999999863 221112233333 9999999999988764 3589999999988764
No 228
>COG4425 Predicted membrane protein [Function unknown]
Probab=26.79 E-value=84 Score=33.09 Aligned_cols=37 Identities=16% Similarity=0.337 Sum_probs=31.4
Q ss_pred hHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCcc
Q 041833 191 DKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGH 227 (427)
Q Consensus 191 ~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~ 227 (427)
-.++|+.+.+.+-.....-|+=..-++|+.|||-|.+
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3578899999999988988887777899999999864
No 229
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=26.48 E-value=59 Score=33.22 Aligned_cols=23 Identities=22% Similarity=0.378 Sum_probs=18.1
Q ss_pred CCCCCeEEecCCcCccchHHHHH
Q 041833 212 FKGRDFYISGESYGGHYVPQLSK 234 (427)
Q Consensus 212 ~~~~~~yI~GESYGG~yvP~lA~ 234 (427)
+...++-+.||||||.-+..++-
T Consensus 156 ld~~~Vgv~GhS~GG~T~m~laG 178 (365)
T COG4188 156 LDPQRVGVLGHSFGGYTAMELAG 178 (365)
T ss_pred cCccceEEEecccccHHHHHhcc
Confidence 33458999999999987777764
No 230
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=26.45 E-value=38 Score=23.43 Aligned_cols=34 Identities=21% Similarity=0.057 Sum_probs=26.0
Q ss_pred ccCccCcccccchhhhHhhhcccCCHHHHHHHHH
Q 041833 256 GNALTDDYHDYLGLFQFWWSAGLISDDTYKQLNL 289 (427)
Q Consensus 256 gn~~id~~~~~~~~~~f~~~~glI~~~~~~~l~~ 289 (427)
..|.+||.....-..+-+...|+||.+....+.+
T Consensus 10 ~gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 10 TGGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TTSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 3467788777776778899999999999887764
No 231
>COG3596 Predicted GTPase [General function prediction only]
Probab=26.39 E-value=86 Score=30.98 Aligned_cols=62 Identities=21% Similarity=0.286 Sum_probs=39.3
Q ss_pred CCCCceEeecC--CCCchhHhhhhhhh-cCCeEEcCCCCceeeCCCCccc--cceEEEEeCCCCcccCcC
Q 041833 116 DSKPLVLWLNG--GPGCSSIAYGEAEE-IGPFHIKPDGKTLYLNPYSWNQ--VANILFLDSPVGVGFSYS 180 (427)
Q Consensus 116 ~~~Pl~lWlnG--GPG~Ss~~~g~~~e-~GP~~~~~~~~~l~~n~~sW~~--~anvlfiDqP~G~GfSy~ 180 (427)
...|+.+.|-| |-|=||++=.+|+. .-|.....-+ ...-.+.|.. .-||+.+|.| |.|-+..
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~--t~~~~~~~~~~~~~~l~lwDtP-G~gdg~~ 102 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVG--TDITTRLRLSYDGENLVLWDTP-GLGDGKD 102 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecccC--CCchhhHHhhccccceEEecCC-Ccccchh
Confidence 56799999999 77779988556642 3344322211 2223334443 3799999999 9997654
No 232
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=25.82 E-value=49 Score=28.65 Aligned_cols=20 Identities=35% Similarity=0.409 Sum_probs=16.1
Q ss_pred CCCCCceEeecCCCCchhHh
Q 041833 115 PDSKPLVLWLNGGPGCSSIA 134 (427)
Q Consensus 115 p~~~Pl~lWlnGGPG~Ss~~ 134 (427)
..++||||-+||.||+.--.
T Consensus 49 ~p~KpLVlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTGKNF 68 (127)
T ss_pred CCCCCEEEEeecCCCCcHHH
Confidence 45789999999999986543
No 233
>COG0218 Predicted GTPase [General function prediction only]
Probab=25.82 E-value=1.1e+02 Score=28.66 Aligned_cols=62 Identities=21% Similarity=0.346 Sum_probs=37.5
Q ss_pred CCCCCceEeecC--CCCchhHhhhhhhh-cCCeEE-cCCCCceeeCCCCccccceEEEEeCCCCcccCcC
Q 041833 115 PDSKPLVLWLNG--GPGCSSIAYGEAEE-IGPFHI-KPDGKTLYLNPYSWNQVANILFLDSPVGVGFSYS 180 (427)
Q Consensus 115 p~~~Pl~lWlnG--GPG~Ss~~~g~~~e-~GP~~~-~~~~~~l~~n~~sW~~~anvlfiDqP~G~GfSy~ 180 (427)
|.++..=+-+-| -=|=||++ -.+.. -+=-++ +..|.+-..|-+.|++. +.+||.| |-||-..
T Consensus 20 P~~~~~EIaF~GRSNVGKSSlI-N~l~~~k~LArtSktPGrTq~iNff~~~~~--~~lVDlP-GYGyAkv 85 (200)
T COG0218 20 PEDDLPEIAFAGRSNVGKSSLI-NALTNQKNLARTSKTPGRTQLINFFEVDDE--LRLVDLP-GYGYAKV 85 (200)
T ss_pred CCCCCcEEEEEccCcccHHHHH-HHHhCCcceeecCCCCCccceeEEEEecCc--EEEEeCC-CcccccC
Confidence 433333334444 23788887 44433 221122 23456778888888876 8899999 9888654
No 234
>TIGR01911 HesB_rel_seleno HesB-like selenoprotein. This model represents a family of small proteins related to HesB and its close homologs, which are likely to be invovlved in iron-sulfur cluster assembly (See TIGR00049 and pfam01521). Several members are selenoproteins, with a TGA codon and Sec residue that aligns to the conserved Cys of the HesB domain. A variable Cys/Ser/Gly-rich C-terminal region is not included in the seed alignment and model.
Probab=25.57 E-value=59 Score=26.30 Aligned_cols=57 Identities=18% Similarity=0.242 Sum_probs=29.7
Q ss_pred ceEeecCCCCchhHhhhhhhhc---CCeEEcCCCCceeeCCCCcc--ccceEEEEeCCCCccc
Q 041833 120 LVLWLNGGPGCSSIAYGEAEEI---GPFHIKPDGKTLYLNPYSWN--QVANILFLDSPVGVGF 177 (427)
Q Consensus 120 l~lWlnGGPG~Ss~~~g~~~e~---GP~~~~~~~~~l~~n~~sW~--~~anvlfiDqP~G~Gf 177 (427)
|=|-+.|| |||.+.|++-.+. +-..+..+|-++...+.|-. +-+.|=|++...|.||
T Consensus 28 LRi~v~~g-GCsG~~Y~~~ld~~~~~D~v~~~~gv~v~vD~~s~~~l~G~~iDy~~~~~g~gF 89 (92)
T TIGR01911 28 IRIHFAGM-GCMGPMFNLIADEEKEGDEIEKIHDLTFLIDKNLIDQFGGFSIECAEENFGAGF 89 (92)
T ss_pred EEEEEeCC-CccCcccceEecCCCCCCEEEEeCCEEEEECHHHHHHhCCCEEEEecCCCCCcE
Confidence 77778887 8999886655432 11222233334444443322 2344555555555554
No 235
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=25.27 E-value=1.3e+02 Score=28.89 Aligned_cols=25 Identities=16% Similarity=0.243 Sum_probs=22.7
Q ss_pred eeEEeCCCCcccChhhHHHHHHhcC
Q 041833 333 FLYDSGDTDAVIPVTSTRYSIDALN 357 (427)
Q Consensus 333 ~Liy~Gd~D~i~p~~gt~~~i~~L~ 357 (427)
.|+..|+.|.+||......|-++|+
T Consensus 167 ilfl~ae~D~~~p~~~v~~~ee~lk 191 (242)
T KOG3043|consen 167 ILFLFAELDEDVPPKDVKAWEEKLK 191 (242)
T ss_pred EEEEeecccccCCHHHHHHHHHHHh
Confidence 7899999999999999999988875
No 236
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=23.60 E-value=8.5e+02 Score=25.35 Aligned_cols=27 Identities=15% Similarity=0.004 Sum_probs=22.1
Q ss_pred cceeEEeCCCCcccChhhHHHHHHhcC
Q 041833 331 FDFLYDSGDTDAVIPVTSTRYSIDALN 357 (427)
Q Consensus 331 i~~Liy~Gd~D~i~p~~gt~~~i~~L~ 357 (427)
.+..+|.|+.|.++.....+..+..+.
T Consensus 333 ~P~~l~~g~~D~l~~~~DV~~~~~~~~ 359 (403)
T KOG2624|consen 333 VPTALYYGDNDWLADPEDVLILLLVLP 359 (403)
T ss_pred cCEEEEecCCcccCCHHHHHHHHHhcc
Confidence 345599999999999999988777664
No 237
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=23.45 E-value=95 Score=30.78 Aligned_cols=48 Identities=23% Similarity=0.522 Sum_probs=34.6
Q ss_pred ccceEEEEeCCCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHHccCCCCCCeEEecCCcCcc
Q 041833 162 QVANILFLDSPVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLERFSQFKGRDFYISGESYGGH 227 (427)
Q Consensus 162 ~~anvlfiDqP~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~fp~~~~~~~yI~GESYGG~ 227 (427)
+.+-||-||-|+|+|.+. .|.++.+-|- |..||++.-..+|+ .|||+-
T Consensus 69 enSkvI~VeGnI~sGK~k--------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 69 ENSKVIVVEGNIGSGKTK--------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred ccceEEEEeCCcccCchh--------------HHHHHHHHhC--Ccccccccccceee--cccCcc
Confidence 557899999999999763 2444444333 46899888777777 789883
No 238
>TIGR03282 methan_mark_13 putative methanogenesis marker 13 metalloprotein. Members of this protein family, to date, are found in a completed prokaryotic genome if and only if the species is one of the archaeal methanogens. The exact function is unknown, but likely is linked to methanogenesis or a process closely connected to it. This metal cluster-binding family is related to nitrogenase structural protein NifD and accessory protein NifE, among others.
Probab=22.57 E-value=6.7e+02 Score=25.58 Aligned_cols=18 Identities=28% Similarity=0.621 Sum_probs=14.5
Q ss_pred CeEEEEECCCCCcCCcCC
Q 041833 382 GLTFVTVRGAGHEVPLHR 399 (427)
Q Consensus 382 ~Ltfv~V~gAGHmvP~dq 399 (427)
+-.|+.|-|.=|.+|.+.
T Consensus 279 ~~d~~~~~gvpha~~~~~ 296 (352)
T TIGR03282 279 DPDFAVITGVPHAVPIEE 296 (352)
T ss_pred CCCEEEEeCCCCcCCHHH
Confidence 678899999999987653
No 239
>PRK11190 Fe/S biogenesis protein NfuA; Provisional
Probab=22.34 E-value=1.3e+02 Score=27.83 Aligned_cols=63 Identities=17% Similarity=0.291 Sum_probs=39.3
Q ss_pred ceEeecCCCCchhHhhhhhh--h----cCCeEEcCCCCceeeCCCC--ccccceEEEEeCCCCcccCcCCCC
Q 041833 120 LVLWLNGGPGCSSIAYGEAE--E----IGPFHIKPDGKTLYLNPYS--WNQVANILFLDSPVGVGFSYSNTS 183 (427)
Q Consensus 120 l~lWlnGGPG~Ss~~~g~~~--e----~GP~~~~~~~~~l~~n~~s--W~~~anvlfiDqP~G~GfSy~~~~ 183 (427)
|=|-+.|| |||.+.|++-. + -+-..+..+|-++...+.| +.+-+.|=|+|...|.||...++.
T Consensus 25 LRI~V~~g-GCsG~~Y~~~~~~~~~~~~~D~v~e~~gv~v~Vd~~S~~~L~G~~IDyve~~~g~gF~f~NPN 95 (192)
T PRK11190 25 IRVFVINP-GTPNAECGVSYCPPDAVEATDTELKFDGFSAYVDELSAPFLEDAEIDFVTDQLGSQLTLKAPN 95 (192)
T ss_pred EEEEEECC-CcCCceeeeEEeecCCCCCCCEEEEeCCEEEEECcchHhHhCCCEEEEeecCCCCceEEECCC
Confidence 33444443 77766555443 1 1223344455566666665 557789999999999999996653
No 240
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=21.78 E-value=89 Score=32.45 Aligned_cols=35 Identities=37% Similarity=0.758 Sum_probs=26.2
Q ss_pred EEEeeEEecCCCCeeEEEEEEeeccCCCCCCce-EeecC
Q 041833 89 HYSGYVTVNEESGRALFYWFVEAVEDPDSKPLV-LWLNG 126 (427)
Q Consensus 89 ~~sGy~~v~~~~~~~lFy~f~es~~~p~~~Pl~-lWlnG 126 (427)
...||++.|+. ++|.. ..|++....+-||| +||.|
T Consensus 200 ~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 46899999876 67777 77775555666766 89997
No 241
>PF14020 DUF4236: Protein of unknown function (DUF4236)
Probab=21.73 E-value=1.2e+02 Score=22.31 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=11.7
Q ss_pred eEEEEeCCCCcccCcC
Q 041833 165 NILFLDSPVGVGFSYS 180 (427)
Q Consensus 165 nvlfiDqP~G~GfSy~ 180 (427)
..+.++-| |+|.||.
T Consensus 40 ~~~t~~iP-GtGlsyr 54 (55)
T PF14020_consen 40 RRTTVGIP-GTGLSYR 54 (55)
T ss_pred cEEEEEcC-CCccEEe
Confidence 44678888 9999984
No 242
>KOG1643 consensus Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=20.89 E-value=1.9e+02 Score=27.23 Aligned_cols=82 Identities=20% Similarity=0.395 Sum_probs=49.9
Q ss_pred CCCccccceEEEEeC--CCCcccCcCCCCCCCccCChHHHHHHHHHHHHHHHHH--ccCCCCCCeEEecCCcCccchHHH
Q 041833 157 PYSWNQVANILFLDS--PVGVGFSYSNTSSDITTNGDKRTAEDSLKFLLKWLER--FSQFKGRDFYISGESYGGHYVPQL 232 (427)
Q Consensus 157 ~~sW~~~anvlfiDq--P~G~GfSy~~~~~~~~~~~~~~~A~d~~~fL~~f~~~--fp~~~~~~~yI~GESYGG~yvP~l 232 (427)
--+|.+. +|-.++ .+|||.. -..+.|+++.+.|++|+.. -+.....-=+|-|-|--| .-
T Consensus 153 v~~w~ni--viAYEPVWAIGTGk~-----------atp~QaqEVh~~iR~wl~~~vs~~Va~~~RIiYGGSV~g----~N 215 (247)
T KOG1643|consen 153 VKDWSNI--VIAYEPVWAIGTGKT-----------ATPEQAQEVHAEIRKWLKSNVSDAVASSTRIIYGGSVNG----GN 215 (247)
T ss_pred cCCccce--EEEeeceeeecCCCC-----------CCHHHHHHHHHHHHHHHhhcchhhhhhceEEEecccccc----cc
Confidence 3446543 344552 2477753 2356799999999999975 323333333455555544 44
Q ss_pred HHHHHHhhhhcCCcceecceeeeccCccCcc
Q 041833 233 SKAIIRHNQATGEKAINLKGYMVGNALTDDY 263 (427)
Q Consensus 233 A~~i~~~~~~~~~~~inLkGi~ign~~id~~ 263 (427)
+..+.+ .-.+.|.++|...+.|.
T Consensus 216 ~~el~~--------~~diDGFLVGGaSLKpe 238 (247)
T KOG1643|consen 216 CKELAK--------KPDIDGFLVGGASLKPE 238 (247)
T ss_pred HHHhcc--------cccccceEEcCcccChH
Confidence 455443 44589999998888765
Done!