BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041834
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P29381|AGL1_ARATH Agamous-like MADS-box protein AGL1 OS=Arabidopsis thaliana GN=AGL1
PE=1 SV=1
Length = 248
Score = 231 bits (589), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/173 (65%), Positives = 143/173 (82%), Gaps = 8/173 (4%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
TI+RYKKAC+D+ NP S+TEANTQ+YQQEA+KLRRQIR+IQN NRHI+GE+L +LNFKE
Sbjct: 79 GTIERYKKACSDAVNPPSVTEANTQYYQQEASKLRRQIRDIQNSNRHIVGESLGSLNFKE 138
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LKNLE RLEKGI RVRSKKNE+L+AEIE+M+KRE++LQ++NMYLRA+I+E R ++Q
Sbjct: 139 LKNLEGRLEKGISRVRSKKNELLVAEIEYMQKREMELQHNNMYLRAKIAEGARLNPDQQE 198
Query: 122 ESMMQQGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 169
S++Q G VYE SQ Y+RN++PVNLLEPN Q++ Q DQPPLQLV
Sbjct: 199 SSVIQ--GTTVYESGVSSHDQSQHYNRNYIPVNLLEPNQQFSGQ-DQPPLQLV 248
>sp|P29385|AGL5_ARATH Agamous-like MADS-box protein AGL5 OS=Arabidopsis thaliana GN=AGL5
PE=1 SV=1
Length = 246
Score = 227 bits (579), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 140/173 (80%), Gaps = 10/173 (5%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
TI+RYKKAC+D+ NP +ITEANTQ+YQQEA+KLRRQIR+IQNLNRHILGE+L +LNFKE
Sbjct: 79 GTIERYKKACSDAVNPPTITEANTQYYQQEASKLRRQIRDIQNLNRHILGESLGSLNFKE 138
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LKNLE+RLEKGI RVRSKK+EML+AEIE+M+KREI+LQNDNMYLR++I+E QQ Q
Sbjct: 139 LKNLESRLEKGISRVRSKKHEMLVAEIEYMQKREIELQNDNMYLRSKITERTGLQQ--QE 196
Query: 122 ESMMQQGGGHVYEPAA-----SQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 169
S++ Q G VYE S Y+RN++ VNLLEPN + Q DQPPLQLV
Sbjct: 197 SSVIHQ--GTVYESGVTSSHQSGQYNRNYIAVNLLEPNQNSSNQ-DQPPLQLV 246
>sp|Q40168|AG_SOLLC Floral homeotic protein AGAMOUS OS=Solanum lycopersicum GN=AG1 PE=2
SV=1
Length = 248
Score = 194 bits (494), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 129/170 (75%), Gaps = 3/170 (1%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
ATI+RYKKAC+DSSN GS++EAN Q+YQQEA+KLR QI + N NR+++GEAL+ + KE
Sbjct: 80 ATIERYKKACSDSSNTGSVSEANAQYYQQEASKLRAQIGNLMNQNRNMMGEALAGMKLKE 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LKNLE R+EKGI ++RSKKNE+L AEIE+M+KRE+ L N+N YLRA+I+E ERAQ + Q
Sbjct: 140 LKNLEQRIEKGISKIRSKKNELLFAEIEYMQKREVDLHNNNQYLRAKIAETERAQHQHQQ 199
Query: 122 ESMMQQGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 169
++M + +E P Q RN+L VN L+ N+ Y RQ DQPP+QLV
Sbjct: 200 MNLMPGSSSNYHELVPPPQQFDTRNYLQVNGLQTNNHYPRQ-DQPPIQLV 248
>sp|Q43585|AG_TOBAC Floral homeotic protein AGAMOUS OS=Nicotiana tabacum GN=AG1 PE=2
SV=1
Length = 248
Score = 191 bits (484), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/170 (60%), Positives = 131/170 (77%), Gaps = 3/170 (1%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
ATI+RYKKAC+DSSN GSI+EAN Q+YQQEA+KLR QI +QN NR++LGE+L+ L+ ++
Sbjct: 80 ATIERYKKACSDSSNTGSISEANAQYYQQEASKLRAQIGNLQNQNRNMLGESLAALSLRD 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LKNLE ++EKGI ++RSKKNE+L AEIE+M+KREI L N+N YLRA+I+E ERAQQ++Q
Sbjct: 140 LKNLEQKIEKGISKIRSKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERAQQQQQQ 199
Query: 122 ESMMQQGGGHVYE--PAASQPYDRNFLPVNLLEPNHQYARQDDQPPLQLV 169
+ M G YE P Q RN+L VN L+ N+ Y RQ DQP LQLV
Sbjct: 200 QQMNLMPGSSSYELVPPPHQFDTRNYLQVNGLQTNNHYTRQ-DQPSLQLV 248
>sp|Q40885|AG_PETHY Floral homeotic protein AGAMOUS OS=Petunia hybrida GN=AG1 PE=1 SV=1
Length = 242
Score = 188 bits (477), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 127/170 (74%), Gaps = 9/170 (5%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
ATI+RYKKAC+DSSN GSI EAN Q+YQQEA+KLR QI +QN NR+ LGE+L+ LN ++
Sbjct: 80 ATIERYKKACSDSSNTGSIAEANAQYYQQEASKLRAQIGNLQNQNRNFLGESLAALNLRD 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
L+NLE ++EKGI ++R+KKNE+L AEIE+M+KREI L N+N YLRA+I+E ER+QQ
Sbjct: 140 LRNLEQKIEKGISKIRAKKNELLFAEIEYMQKREIDLHNNNQYLRAKIAETERSQQ---- 195
Query: 122 ESMMQQGGGHVYEPA-ASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQLV 169
M G Y+ Q +D RN+L VN L+ N+ Y RQ DQPPLQLV
Sbjct: 196 --MNLMPGSSSYDLVPPQQSFDARNYLQVNGLQTNNHYPRQ-DQPPLQLV 242
>sp|Q40872|AG_PANGI Floral homeotic protein AGAMOUS OS=Panax ginseng GN=AG2 PE=2 SV=1
Length = 242
Score = 186 bits (471), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 125/169 (73%), Gaps = 7/169 (4%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
TI+RYKKAC DS N S++EAN QFYQQEA+KLR++I IQ NR+++GE+L +L ++
Sbjct: 80 GTIERYKKACTDSPNTSSVSEANAQFYQQEASKLRQEISSIQKNNRNMMGESLGSLTVRD 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LK LE +LEKGI R+RSKKNE+L AEIE+M+K+EI L N+N YLRA+I+ENERAQQ
Sbjct: 140 LKGLETKLEKGISRIRSKKNELLFAEIEYMQKKEIDLHNNNQYLRAKIAENERAQQH--- 196
Query: 122 ESMMQQGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQLV 169
M G YE A Q +D RN++ +N L+PN+ Y+RQ DQ LQLV
Sbjct: 197 --MNLMPGSSDYELAPPQSFDGRNYIQLNGLQPNNHYSRQ-DQTALQLV 242
>sp|Q40704|MADS3_ORYSJ MADS-box transcription factor 3 OS=Oryza sativa subsp. japonica
GN=MADS3 PE=2 SV=1
Length = 236
Score = 168 bits (426), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/169 (49%), Positives = 123/169 (72%), Gaps = 5/169 (2%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLN-RHILGEALSTLNFK 60
+T++RYKKA +D+SN G++ E N Q YQQE++KLR+QI +QN N R I+G++++T++ +
Sbjct: 64 STVERYKKANSDTSNSGTVAEVNAQHYQQESSKLRQQISSLQNANSRTIVGDSINTMSLR 123
Query: 61 ELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQ 120
+LK +E RLEKGI ++R++KNE+L AE+E+M+KRE++LQNDNMYLR+++ ENER QQ
Sbjct: 124 DLKQVENRLEKGIAKIRARKNELLYAEVEYMQKREVELQNDNMYLRSKVVENERGQQPL- 182
Query: 121 SESMMQQGGGHVYEPAASQPYD-RNFLPVNLLEPNHQYARQDDQPPLQL 168
+MM Y+ + PYD RNFL VN+++ YA Q LQL
Sbjct: 183 --NMMGAASTSEYDHMVNNPYDSRNFLQVNIMQQPQHYAHQLQPTTLQL 229
>sp|P17839|AG_ARATH Floral homeotic protein AGAMOUS OS=Arabidopsis thaliana GN=AG PE=1
SV=2
Length = 252
Score = 164 bits (416), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 122/178 (68%), Gaps = 15/178 (8%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
TI+RYKKA +D+SN GS+ E N Q+YQQE+ KLR+QI IQN NR ++GE + +++ KE
Sbjct: 80 GTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKE 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
L+NLE RLE+ I R+RSKKNE+L +EI++M+KRE+ L NDN LRA+I+ENER S
Sbjct: 140 LRNLEGRLERSITRIRSKKNELLFSEIDYMQKREVDLHNDNQILRAKIAENER---NNPS 196
Query: 122 ESMMQQGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQY--ARQDDQPPLQLV 169
S+M GG YE SQP+D RN+ V L+P NH Y A + DQ LQLV
Sbjct: 197 ISLMP--GGSNYEQLMPPPQTQSQPFDSRNYFQVAALQPNNHHYSSAGRQDQTALQLV 252
>sp|Q01540|AG_BRANA Floral homeotic protein AGAMOUS OS=Brassica napus GN=AG1 PE=2 SV=1
Length = 252
Score = 160 bits (404), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 121/178 (67%), Gaps = 15/178 (8%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
TI+RYKKA +D+SN GS+ E N Q+YQQE+ KLR+QI IQN NR ++GE + +++ KE
Sbjct: 80 GTIERYKKAISDNSNTGSVAEINAQYYQQESAKLRQQIISIQNSNRQLMGETIGSMSPKE 139
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
L+NLE RL++ + R+RSKKNE+L AEI++M+KRE+ L NDN LRA+I+EN ER +
Sbjct: 140 LRNLEGRLDRSVNRIRSKKNELLFAEIDYMQKREVDLHNDNQLLRAKIAEN-----ERNN 194
Query: 122 ESMMQQGGGHVYE------PAASQPYD-RNFLPVNLLEP-NHQY--ARQDDQPPLQLV 169
SM GG YE QP+D RN+ V L+P NH Y A ++DQ LQLV
Sbjct: 195 PSMSLMPGGSNYEQIMPPPQTQPQPFDSRNYFQVAALQPNNHHYSSAGREDQTALQLV 252
>sp|Q2V0P1|MAD58_ORYSJ MADS-box transcription factor 58 OS=Oryza sativa subsp. japonica
GN=MADS58 PE=2 SV=1
Length = 272
Score = 150 bits (379), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
TI+RYKKA +D+SN ++ E N Q YQQEA KL++QI +QN NR ++G+ ++T+N +EL
Sbjct: 107 TIERYKKANSDTSNASTVAEINAQHYQQEAAKLKQQITNLQNSNRTLVGDNITTMNHREL 166
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSE 122
K LE RL+KG+G++R++KNE+L AEIE+M++RE +LQNDNMYL+++++E+ER Q+
Sbjct: 167 KQLEGRLDKGLGKIRARKNELLCAEIEYMQRRETELQNDNMYLKSKVAESERG---LQTV 223
Query: 123 SMMQQGGGHVYEPAASQPYDRNFLPVNLLEPNHQYARQDDQ 163
+MM Y RNFL N++ Y Q+D+
Sbjct: 224 NMMGSASTSEYVQNMIHYDPRNFLQFNIMHQPQYYPEQEDR 264
>sp|Q38836|AGL11_ARATH Agamous-like MADS-box protein AGL11 OS=Arabidopsis thaliana
GN=AGL11 PE=1 SV=1
Length = 230
Score = 143 bits (361), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 72/140 (51%), Positives = 103/140 (73%), Gaps = 2/140 (1%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
+TI+RYKKAC+DS+N ++ E N +YQQE+ KLR+QI+ IQN NR+++G++LS+L+ KE
Sbjct: 64 STIERYKKACSDSTNTSTVQEINAAYYQQESAKLRQQIQTIQNSNRNLMGDSLSSLSVKE 123
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
LK +E RLEK I R+RSKK+E+LL EIE +KREI+L N+N+YLR +++E ER QQ
Sbjct: 124 LKQVENRLEKAISRIRSKKHELLLVEIENAQKREIELDNENIYLRTKVAEVERYQQHHH- 182
Query: 122 ESMMQQGGGHVYEPAASQPY 141
M+ + E AS+ Y
Sbjct: 183 -QMVSGSEINAIEALASRNY 201
>sp|Q8RU31|MAD21_ORYSJ MADS-box transcription factor 21 OS=Oryza sativa subsp. japonica
GN=MADS21 PE=2 SV=1
Length = 265
Score = 140 bits (353), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 65/120 (54%), Positives = 95/120 (79%), Gaps = 1/120 (0%)
Query: 2 ATIDRYKKACADSSNPGSITEANT-QFYQQEATKLRRQIREIQNLNRHILGEALSTLNFK 60
+TI+RYKKA A +S + + N+ Q++QQEA K+R QI+ +QN NRH++GE++ + K
Sbjct: 65 STIERYKKASASTSGSAPVIDVNSHQYFQQEAAKMRHQIQTLQNANRHLIGESIGNMTAK 124
Query: 61 ELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQ 120
ELK+LE RLEKGI R+RSKK+E+L +EIE+M+KRE LQN+NM+LRA+++E ERA+ + Q
Sbjct: 125 ELKSLENRLEKGISRIRSKKHELLFSEIEYMQKREADLQNENMFLRAKVAEAERAEHDDQ 184
>sp|Q2QW53|MAD13_ORYSJ MADS-box transcription factor 13 OS=Oryza sativa subsp. japonica
GN=MADS13 PE=1 SV=2
Length = 270
Score = 134 bits (336), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/163 (48%), Positives = 110/163 (67%), Gaps = 12/163 (7%)
Query: 2 ATIDRYKKACADSSNPGS-ITEANTQ-FYQQEATKLRRQIREIQNLNRHILGEALSTLNF 59
ATIDRYKKA A S G+ + E N Q +YQQE+ KLR QI+ +QN N+H++G+ +S L+
Sbjct: 65 ATIDRYKKAHACGSTSGAPLIEVNAQQYYQQESAKLRHQIQMLQNTNKHLVGDNVSNLSL 124
Query: 60 KELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER----- 114
KELK LE+RLEKGI ++R++KNE+L +EI +M KREI+LQNDNM LR +I+E E+
Sbjct: 125 KELKQLESRLEKGISKIRARKNELLASEINYMAKREIELQNDNMDLRTKIAEEEQQLQQV 184
Query: 115 -----AQQERQSESMMQQGGGHVYEPAASQPYDRNFLPVNLLE 152
A E Q+ + QQ + + AA+Q + F P+NL E
Sbjct: 185 TVARSAAMELQAAAAAQQQQQNPFAVAAAQLDMKCFFPLNLFE 227
>sp|Q6EP49|MAD27_ORYSJ MADS-box transcription factor 27 OS=Oryza sativa subsp. japonica
GN=MADS27 PE=2 SV=2
Length = 240
Score = 71.2 bits (173), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 57/178 (32%), Positives = 92/178 (51%), Gaps = 16/178 (8%)
Query: 2 ATIDRYKKACADS---SNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
+ IDRY K+ + +NP S +F+Q+EA LR+Q+ +Q +R ++GE LS LN
Sbjct: 64 SVIDRYGKSKDEQQAVANPNS----ELKFWQREAASLRQQLHNLQENHRQLMGEDLSGLN 119
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQE 118
KEL++LE +LE + VR+KK+ +L+ EI + ++ + +NM L +IS + E
Sbjct: 120 VKELQSLENQLEISLRSVRTKKDHVLIDEIHELNRKGSLVHQENMELYKKISLIRQENAE 179
Query: 119 RQSESMMQQGGGHVYEPAASQPY-----DRNFLPVNL---LEPNHQYARQDDQPPLQL 168
+ +G V + + PY ++ +PV L P H A Q P L L
Sbjct: 180 LYKKIYETEGPSEVNRDSPT-PYNFAVIEKTNVPVQLGLSTLPQHSDAEQSTAPKLGL 236
>sp|Q6EU39|MADS6_ORYSJ MADS-box transcription factor 6 OS=Oryza sativa subsp. japonica
GN=MADS6 PE=1 SV=1
Length = 250
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 8/147 (5%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
T++RY+ C ++ + + + TQ + E +KL+ + +Q RH+LGE L L+ KEL
Sbjct: 65 TLERYQHCCYNAQDSNNAL-SETQSWYHEMSKLKAKFEALQRTQRHLLGEDLGPLSVKEL 123
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI-----SENERAQQ 117
+ LE +LE + + R +K ++++ ++E + ++E QL N L+ ++ + N RA Q
Sbjct: 124 QQLEKQLECALSQARQRKTQLMMEQVEELRRKERQLGEINRQLKHKLEVEGSTSNYRAMQ 183
Query: 118 ERQSE--SMMQQGGGHVYEPAASQPYD 142
+ ++++ G +V P S D
Sbjct: 184 QASWAQGAVVENGAAYVQPPPHSAAMD 210
>sp|Q10PZ9|MADS1_ORYSJ MADS-box transcription factor 1 OS=Oryza sativa subsp. japonica
GN=MADS1 PE=1 SV=1
Length = 257
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 20/158 (12%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
T++RY+ +C +S + E + QE KL+ ++ +Q R+ILGE L L+ KEL
Sbjct: 66 TLERYR-SCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKEL 122
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSE 122
+ LE ++E + ++RS+KN+ LL ++ ++ +E QLQ+ N LR ++ QE +E
Sbjct: 123 EQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL-------QETSAE 175
Query: 123 SMM----QQGGGHVYEPA--ASQPYDRNFLPVNLLEPN 154
+++ Q GGGH A QP+ LL P+
Sbjct: 176 NVLHMSWQDGGGHSGSSTVLADQPHHHQ----GLLHPH 209
>sp|A2XDY1|MADS1_ORYSI MADS-box transcription factor 1 OS=Oryza sativa subsp. indica
GN=MADS1 PE=2 SV=2
Length = 257
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 86/158 (54%), Gaps = 20/158 (12%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
T++RY+ +C +S + E + QE KL+ ++ +Q R+ILGE L L+ KEL
Sbjct: 66 TLERYR-SCNYNSQDAAAPENEINY--QEYLKLKTRVEFLQTTQRNILGEDLGPLSMKEL 122
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSE 122
+ LE ++E + ++RS+KN+ LL ++ ++ +E QLQ+ N LR ++ QE +E
Sbjct: 123 EQLENQIEVSLKQIRSRKNQALLDQLFDLKSKEQQLQDLNKDLRKKL-------QETSAE 175
Query: 123 SMM----QQGGGHVYEPA--ASQPYDRNFLPVNLLEPN 154
+++ Q GGGH A QP+ LL P+
Sbjct: 176 NVLHMSWQDGGGHSGSSTVLADQPHHHQ----GLLHPH 209
>sp|Q38694|AGL9_ARADE Agamous-like MADS-box protein AGL9 homolog OS=Aranda deborah PE=2
SV=1
Length = 250
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 82/162 (50%), Gaps = 3/162 (1%)
Query: 1 MATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFK 60
+ T+++Y+K C S +I TQ QQE KL+ ++ +Q R++LGE L L K
Sbjct: 64 LKTLEKYQK-CNFGSPESTIISRETQSSQQEYLKLKNRVEALQRSQRNLLGEDLGPLGSK 122
Query: 61 ELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQ 120
EL+ LE +L+ + ++RS + + +L ++ +++RE L N L+ R E+ +A Q++
Sbjct: 123 ELEQLERQLDSSLRQIRSTRTQFMLDQLADLQRREQMLCEANKTLKRRFEESSQANQQQV 182
Query: 121 SESMMQQGGGHVYEPAASQPYDRNFLPVNLLEPNHQYARQDD 162
+ G+ +PA Q + F EP Q D
Sbjct: 183 WDPSNTHAVGYGRQPA--QHHGEAFYHPLECEPTLQIGYHSD 222
>sp|A2RVQ5|AGL16_ARATH Agamous-like MADS-box protein AGL16 OS=Arabidopsis thaliana
GN=AGL16 PE=1 SV=1
Length = 240
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 68/112 (60%), Gaps = 7/112 (6%)
Query: 2 ATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
+ I+RY A ++S +P S QF+Q+EA L+RQ+ +Q +R ++GE LS L+
Sbjct: 64 SVIERYSDAKGETSSENDPAS----EIQFWQKEAAILKRQLHNLQENHRQMMGEELSGLS 119
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARIS 110
+ L+NLE +LE + VR KK++ML+ EI+ + + + +N+ L +++
Sbjct: 120 VEALQNLENQLELSLRGVRMKKDQMLIEEIQVLNREGNLVHQENLDLHKKVN 171
>sp|P29386|AGL6_ARATH Agamous-like MADS-box protein AGL6 OS=Arabidopsis thaliana GN=AGL6
PE=1 SV=2
Length = 252
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 78/154 (50%), Gaps = 11/154 (7%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
+TI+RY + C + S + E TQ + QE TKL+ + + NR++LGE L + KE
Sbjct: 64 STIERYNR-CYNCSLSNNKPEETTQSWCQEVTKLKSKYESLVRTNRNLLGEDLGEMGVKE 122
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
L+ LE +LE + R +K ++++ E+E + K+E QL + N L+ + + E +
Sbjct: 123 LQALERQLEAALTATRQRKTQVMMEEMEDLRKKERQLGDINKQLKIKF------ETEGHA 176
Query: 122 ESMMQQGGGHVYEPAASQPYDRNFLPVNLLEPNH 155
Q + A P + F PV EP+H
Sbjct: 177 FKTFQDLWANSAASVAGDPNNSEF-PV---EPSH 206
>sp|Q9SBK9|CAL_BRARP Transcription factor CAULIFLOWER OS=Brassica rapa subsp. pekinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 5 DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKN 64
+RY A P S A T + E ++L+ +I ++ RH LGE L +++ KEL+N
Sbjct: 71 ERYSYAEKQLKAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQN 129
Query: 65 LEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSESM 124
LE +L+ + +RS+KN+++ + ++++E ++ +N L +I E E + Q++S
Sbjct: 130 LEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSE 189
Query: 125 MQQGGGHVYEPAASQP 140
Q HV A QP
Sbjct: 190 QQNRSHHV----APQP 201
>sp|Q6R4S6|CAL_BRARC Transcription factor CAULIFLOWER OS=Brassica rapa subsp. chinensis
GN=CAL PE=2 SV=1
Length = 254
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 5 DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKN 64
+RY A P S A T + E ++L+ +I ++ RH LGE L +++ KEL+N
Sbjct: 71 ERYSYAEKQLKAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQN 129
Query: 65 LEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSESM 124
LE +L+ + +RS+KN+++ + ++++E ++ +N L +I E E + Q++S
Sbjct: 130 LEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSE 189
Query: 125 MQQGGGHVYEPAASQP 140
Q HV A QP
Sbjct: 190 QQNRSHHV----APQP 201
>sp|Q6R4S3|CAL_BRARA Transcription factor CAULIFLOWER OS=Brassica rapa GN=CAL PE=2 SV=1
Length = 254
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 5 DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKN 64
+RY A P S A T + E ++L+ +I ++ RH LGE L +++ KEL+N
Sbjct: 71 ERYSYAEKQLKAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEDLESISIKELQN 129
Query: 65 LEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSESM 124
LE +L+ + +RS+KN+++ + ++++E ++ +N L +I E E + Q++S
Sbjct: 130 LEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLTKQIKERESILRTHQNQSE 189
Query: 125 MQQGGGHVYEPAASQP 140
Q HV A QP
Sbjct: 190 QQNRSHHV----APQP 201
>sp|Q42429|AGL8_SOLTU Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum
PE=2 SV=1
Length = 250
Score = 60.1 bits (144), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 62/108 (57%), Gaps = 10/108 (9%)
Query: 12 ADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEK 71
D ++PGS T E KL+ ++ +Q +H +GE L +LN KEL+NLE +L+
Sbjct: 83 TDHTSPGSWT--------LEHAKLKARLEVLQRNQKHYVGEDLESLNMKELQNLEHQLDS 134
Query: 72 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER--AQQ 117
+ +RS+KN+++ I ++K++ LQ N L ++ E E+ AQQ
Sbjct: 135 ALKHIRSRKNQLMHESISVLQKQDRALQEQNNQLSKKVKEREKEVAQQ 182
>sp|Q39375|CAL_BRAOT Transcription factor CAULIFLOWER OS=Brassica oleracea var. italica
GN=CAL PE=2 SV=1
Length = 251
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 5/136 (3%)
Query: 5 DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKN 64
+RY A P S A T + E ++L+ +I ++ RH LGE L +++ KEL+N
Sbjct: 71 ERYSYAEKQLKVPDSHVNAQTN-WSVEYSRLKAKIELLERNQRHYLGEDLESISIKELQN 129
Query: 65 LEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSESM 124
LE +L+ + +RS+KN+++ + ++++E ++ +N L +I E E + Q++S
Sbjct: 130 LEQQLDTSLKHIRSRKNQLMHESLNHLQRKEKEILEENSMLAKQIRERESILRTHQNQSE 189
Query: 125 MQQGGGHVYEPAASQP 140
Q HV A QP
Sbjct: 190 QQNRSHHV----APQP 201
>sp|O64645|SOC1_ARATH MADS-box protein SOC1 OS=Arabidopsis thaliana GN=SOC1 PE=1 SV=1
Length = 214
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 64/111 (57%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
TIDRY + D + ++E N Q + EA + ++I +++ R +LGE + T + +EL
Sbjct: 65 TIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLEASKRKLLGEGIGTCSIEEL 124
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENE 113
+ +E +LEK + +R++K ++ +IE ++++E L +N L + +E
Sbjct: 125 QQIEQQLEKSVKCIRARKTQVFKEQIEQLKQKEKALAAENEKLSEKWGSHE 175
>sp|Q8GTF5|AP1A_BRAOB Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
botrytis GN=AP1A PE=2 SV=1
Length = 256
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
+++NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDSNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ E Q GH
Sbjct: 144 NQLMYDSINELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDE----QNHGH 193
>sp|B4YPW6|AP1A_BRAOA Floral homeotic protein APETALA 1 A OS=Brassica oleracea var.
alboglabra GN=AP1A PE=3 SV=1
Length = 256
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
+++NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDSNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ E Q GH
Sbjct: 144 NQLMYDSINELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDE----QNHGH 193
>sp|Q96356|2AP1_BRAOT Floral homeotic protein APETALA 1-2 OS=Brassica oleracea var.
italica GN=2AP1 PE=2 SV=1
Length = 256
Score = 58.2 bits (139), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
+++NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDSNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ E Q GH
Sbjct: 144 NQLMYDSINELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDE----QNHGH 193
>sp|Q39371|3AP1_BRAOL Floral homeotic protein APETALA 1 OS=Brassica oleracea GN=AP1 PE=2
SV=1
Length = 256
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ E Q GH
Sbjct: 144 NQLMYESINELQRKEKAIQEQNSMLSKQIKERENVLRAQQEQWDE----QNHGH 193
>sp|Q0D4T4|MAD18_ORYSJ MADS-box transcription factor 18 OS=Oryza sativa subsp. japonica
GN=MADS18 PE=1 SV=1
Length = 249
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
++RY++ D ++ E NT+ + E L+ ++ +Q R +LGE L TL
Sbjct: 65 GILERYQRYSFDER---AVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 114
KEL+ LE +LE + +RSKKN++L I ++K+E L+N N L+ ++ E E+
Sbjct: 122 IKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
>sp|A2YNI2|MAD18_ORYSI MADS-box transcription factor 18 OS=Oryza sativa subsp. indica
GN=MADS18 PE=2 SV=2
Length = 249
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 65/116 (56%), Gaps = 7/116 (6%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQ---FYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
++RY++ D ++ E NT+ + E L+ ++ +Q R +LGE L TL
Sbjct: 65 GILERYQRYSFDER---AVLEPNTEDQENWGDEYGILKSKLDALQKSQRQLLGEQLDTLT 121
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENER 114
KEL+ LE +LE + +RSKKN++L I ++K+E L+N N L+ ++ E E+
Sbjct: 122 IKELQQLEHQLEYSLKHIRSKKNQLLFESISELQKKEKSLKNQNNVLQ-KLMETEK 176
>sp|Q7XUN2|MAD17_ORYSJ MADS-box transcription factor 17 OS=Oryza sativa subsp. japonica
GN=MADS17 PE=1 SV=2
Length = 249
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 63/108 (58%), Gaps = 1/108 (0%)
Query: 3 TIDRYKKACADSSNPGS-ITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
T+++Y C ++ S + Q + QE ++L+ ++ +Q RH+LGE L L+ KE
Sbjct: 65 TLEKYNSCCYNAQGSNSALAGGEHQSWYQEMSRLKTKLECLQRSQRHMLGEDLGPLSIKE 124
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARI 109
L+ LE +LE + + R +K ++++ +++ + ++E QL N L+ ++
Sbjct: 125 LQQLEKQLEYSLSQARQRKTQIMMEQVDDLRRKERQLGELNKQLKNKL 172
>sp|Q41276|AP1_SINAL Floral homeotic protein APETALA 1 OS=Sinapis alba GN=AP1 PE=2 SV=1
Length = 254
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSSKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ QQ GH
Sbjct: 144 NQLMHDSINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWD----QQNHGH 193
>sp|P0C5B2|MAD56_ORYSJ MADS-box transcription factor 56 OS=Oryza sativa subsp. japonica
GN=MADS56 PE=2 SV=1
Length = 233
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 1/106 (0%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
TIDRYK D N +I + + Q + + L +++ + R ILGE L + +EL
Sbjct: 66 TIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGFSIEEL 124
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRAR 108
+ LE +LEK + ++R KK E+L +I ++++E L DN LR +
Sbjct: 125 RGLEMKLEKSLHKIRLKKTELLEQQIAKLKEKERTLLKDNENLRGK 170
>sp|Q39081|CAL_ARATH Transcription factor CAULIFLOWER OS=Arabidopsis thaliana GN=CAL
PE=1 SV=3
Length = 255
Score = 57.4 bits (137), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/118 (29%), Positives = 67/118 (56%), Gaps = 1/118 (0%)
Query: 5 DRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKN 64
+RY A P S A T + E ++L+ +I ++ RH LGE L ++ K+L+N
Sbjct: 71 ERYSYAERQLIAPDSHVNAQTN-WSMEYSRLKAKIELLERNQRHYLGEELEPMSLKDLQN 129
Query: 65 LEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSE 122
LE +LE + +RS+KN+++ + ++++E ++Q +N L +I E E + +Q++
Sbjct: 130 LEQQLETALKHIRSRKNQLMNESLNHLQRKEKEIQEENSMLTKQIKERENILRTKQTQ 187
>sp|Q9XGJ4|GGM13_GNEGN MADS-box protein GGM13 OS=Gnetum gnemon GN=GGM13 PE=2 SV=1
Length = 237
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 87/170 (51%), Gaps = 19/170 (11%)
Query: 4 IDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELK 63
I+RY+K ITE + Q E T+++ + ++Q R ++GE L++L EL
Sbjct: 68 IERYQKVSG-----ARITEYDNQHLYCEMTRMKNENEKLQTNIRRMMGEDLTSLTMTELH 122
Query: 64 NLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSES 123
+L +LE RVRS+KN+++L ++E + ++E L++ N +L R+ ++A E E
Sbjct: 123 HLGQQLESASSRVRSRKNQLMLQQLENLRRKERILEDQNSHL-CRLLAEQQAAVEGVQEP 181
Query: 124 MMQQGGGHVYEPAASQPYDR------NFLPVNLLEPNHQYARQDDQPPLQ 167
+++ G V+ P P D N P++L + Q QP LQ
Sbjct: 182 LLEFG---VFCP----PPDNKTAAAANAGPLHLGHHLPAFRLQPTQPNLQ 224
>sp|D7KWY6|AP1_ARALL Floral homeotic protein APETALA 1 OS=Arabidopsis lyrata subsp.
lyrata GN=AP1 PE=3 SV=1
Length = 256
Score = 57.0 bits (136), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 8/114 (7%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
++ NT + E +L+ +I ++ RH LGE L+ ++ KEL+NLE +L+ + +R++K
Sbjct: 85 SDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLNAMSPKELQNLEQQLDTALKHIRTRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQERQSESMMQQGGGH 131
N+++ I ++++E +Q N L +I E E RAQQE+ QQ GH
Sbjct: 144 NQLMYESINELQRKEKAIQEQNSMLSKQIKEREKILRAQQEQWD----QQNHGH 193
>sp|Q0DEB8|MADS5_ORYSJ MADS-box transcription factor 5 OS=Oryza sativa subsp. japonica
GN=MADS5 PE=1 SV=1
Length = 225
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 3 TIDRYKKAC---ADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNF 59
T++RY+ +C +S + E YQ E KL+ ++ +Q R++LGE L L+
Sbjct: 66 TLERYR-SCNYNLNSCEASAALETELSNYQ-EYLKLKTRVEFLQTTQRNLLGEDLVPLSL 123
Query: 60 KELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQER 119
KEL+ LE ++E + +RS KN+ LL ++ ++++E QLQ+ N L+ +I QE
Sbjct: 124 KELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI-------QET 176
Query: 120 QSESMMQQGGGHVYEPAASQPYDRNFLPVNLLEPN 154
E+M+ V + ++ FL + +P+
Sbjct: 177 SGENMLHISCQDVGPSGHASEANQEFLHHAICDPS 211
>sp|A2Y9P0|MADS5_ORYSI MADS-box transcription factor 5 OS=Oryza sativa subsp. indica
GN=MADS5 PE=2 SV=1
Length = 225
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 3 TIDRYKKAC---ADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNF 59
T++RY+ +C +S + E YQ E KL+ ++ +Q R++LGE L L+
Sbjct: 66 TLERYR-SCNYNLNSCEASAALETELSNYQ-EYLKLKTRVEFLQTTQRNLLGEDLVPLSL 123
Query: 60 KELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQER 119
KEL+ LE ++E + +RS KN+ LL ++ ++++E QLQ+ N L+ +I QE
Sbjct: 124 KELEQLENQIEISLMNIRSSKNQQLLDQVFELKRKEQQLQDANKDLKRKI-------QET 176
Query: 120 QSESMMQQGGGHVYEPAASQPYDRNFLPVNLLEPN 154
E+M+ V + ++ FL + +P+
Sbjct: 177 SGENMLHISCQDVGPSGHASEANQEFLHHAICDPS 211
>sp|Q40170|AGL8_SOLLC Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum
GN=TDR4 PE=2 SV=1
Length = 227
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 12 ADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEK 71
D ++P S T E KL+ ++ +Q +H +GE L +L+ KEL+NLE +L+
Sbjct: 83 TDHTSPVSWT--------LEHRKLKARLEVLQRNQKHYVGEDLESLSMKELQNLEHQLDS 134
Query: 72 GIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQE 118
+ +RS+KN+++ I ++K++ LQ N L ++ E E++ Q+
Sbjct: 135 ALKHIRSRKNQLMHESISVLQKKDRALQEQNNQLSKKVKEREKSAQQ 181
>sp|A2Z9Q7|MAD56_ORYSI MADS-box transcription factor 56 OS=Oryza sativa subsp. indica
GN=MADS56 PE=2 SV=2
Length = 233
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 58/106 (54%), Gaps = 1/106 (0%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
TIDRYK D N +I + + Q + + L +++ + R ILGE L + +EL
Sbjct: 66 TIDRYKAYTKDHVNNKTI-QQDIQQVKDDTLGLAKKLEALDESRRKILGENLEGCSIEEL 124
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRAR 108
+ LE +LEK + +R KK E+L +I ++++E L DN LR +
Sbjct: 125 RGLEMKLEKSLHNIRLKKTELLERQIAKLKEKERTLLKDNENLRGK 170
>sp|Q6Q9H6|MAD34_ORYSJ MADS-box transcription factor 34 OS=Oryza sativa subsp. japonica
GN=MADS34 PE=2 SV=2
Length = 239
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 65/111 (58%)
Query: 1 MATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFK 60
+ T++RY++ S + + T Q QE L+ + +Q R++LGE L+ L
Sbjct: 64 LKTLERYQRYIYASQDAAAPTSDEMQNNYQEYVNLKAHVEILQQSQRNLLGEDLAPLATN 123
Query: 61 ELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISE 111
EL+ LE+++ + + ++RS+K ++LL E+ ++++E LQ+ N L+ ++ E
Sbjct: 124 ELEQLESQVVRTLKQIRSRKTQVLLDELCDLKRKEQMLQDANRVLKRKLDE 174
>sp|Q9SZJ6|AGL21_ARATH Agamous-like MADS-box protein AGL21 OS=Arabidopsis thaliana
GN=AGL21 PE=1 SV=1
Length = 228
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 83/168 (49%), Gaps = 11/168 (6%)
Query: 2 ATIDRYKKACADSS---NPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
+ IDRY K+ + NP S +F+Q+EA LR+++ +Q +R ++GE L+ L+
Sbjct: 64 SVIDRYNKSKIEQQQLLNPAS----EVKFWQREAAVLRQELHALQENHRQMMGEQLNGLS 119
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQE 118
EL +LE ++E + +R +K ++L EI+ + ++ + +N+ L ++ + E
Sbjct: 120 VNELNSLENQIEISLRGIRMRKEQLLTQEIQELSQKRNLIHQENLDLSRKVQRIHQENVE 179
Query: 119 RQSESMMQQGGGHVY-EPAASQPYDRNFLPVNLLEPNHQYARQDDQPP 165
++ M G + E A + + + L +P H D PP
Sbjct: 180 LYKKAYMANTNGFTHREVAVADDESHTQIRLQLSQPEHS---DYDTPP 224
>sp|P0DI14|AP1_BRARP Floral homeotic protein APETALA 1 OS=Brassica rapa subsp.
pekinensis GN=AP1 PE=3 SV=1
Length = 256
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 21 TEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKK 80
++ NT + E +L+ +I ++ RH LGE L ++ KEL+NLE +L+ + +RS+K
Sbjct: 85 SDVNTN-WSMEYNRLKAKIELLERNQRHYLGEDLQAMSPKELQNLEQQLDTALKHIRSRK 143
Query: 81 NEMLLAEIEFMEKREIQLQNDNMYLRARISENE---RAQQE 118
N+++ + ++++E +Q N L +I E E RAQQE
Sbjct: 144 NQLMYDSVNELQRKEKAIQEQNSMLSKQIKEREKVLRAQQE 184
>sp|Q6VAM4|MAD23_ORYSJ MADS-box transcription factor 23 OS=Oryza sativa subsp. japonica
GN=MADS23 PE=2 SV=1
Length = 159
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQ--FYQQEATKLRRQIREIQNLNRHILGEALSTLNF 59
+ I+RY + D P A+++ +QQEA LR+Q+ +Q +R +LG+ LS L+
Sbjct: 64 SIIERYNETKED---PHQTMNASSEAKLWQQEAASLRQQLHNLQEYHRQLLGQQLSGLDV 120
Query: 60 KELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREI 96
++L+NLE++LE + +R +K+ +++ +I+ + ++ +
Sbjct: 121 EDLQNLESKLEMSLKNIRLRKDNVMMDQIQELSRKVV 157
>sp|Q6Z6W2|MAD57_ORYSJ MADS-box transcription factor 57 OS=Oryza sativa subsp. japonica
GN=MADS57 PE=2 SV=2
Length = 241
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 76/143 (53%), Gaps = 7/143 (4%)
Query: 2 ATIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKE 61
IDRY A + + +E + +Q+EA LR+Q+ +Q ++ ++GE LS L ++
Sbjct: 64 TVIDRYTNAKEELLGGNATSE--IKIWQREAASLRQQLHNLQESHKQLMGEELSGLGVRD 121
Query: 62 LKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQS 121
L+ LE RLE + +R +K+ +L +EIE + + + +N+ L + N +QQ+ +
Sbjct: 122 LQGLENRLEISLRNIRMRKDNLLKSEIEELHVKGSLIHQENIELSRSL--NVMSQQKLEL 179
Query: 122 ESMMQ---QGGGHVYEPAASQPY 141
+ +Q Q G ++S PY
Sbjct: 180 YNKLQACEQRGATDANESSSTPY 202
>sp|Q03489|AGL9_PETHY Agamous-like MADS-box protein AGL9 homolog OS=Petunia hybrida
GN=FBP2 PE=1 SV=2
Length = 241
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 87/164 (53%), Gaps = 8/164 (4%)
Query: 1 MATIDRYKKACADSSNPGSIT--EANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLN 58
+ T++RY+K C + +I+ EA QQE KL+ + +Q R++LGE L LN
Sbjct: 64 LKTLERYQK-CNYGAPETNISTREALEISSQQEYLKLKARYEALQRSQRNLLGEDLGPLN 122
Query: 59 FKELKNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQE 118
KEL++LE +L+ + ++RS + +++L +++ ++++E L N L+ R+ E +
Sbjct: 123 SKELESLERQLDMSLKQIRSTRTQLMLDQLQDLQRKEHALNEANRTLKQRLMEGSTLNLQ 182
Query: 119 RQSESMMQQGGGHVYEPAASQPYDRNFLPVNLLEPNHQYARQDD 162
Q + Q G+ + +Q D F P+ EP Q Q+D
Sbjct: 183 WQQNA---QDVGYGRQATQTQG-DGFFHPLE-CEPTLQIGYQND 221
>sp|D7KQR8|CAL_ARALL Transcription factor CAULIFLOWER OS=Arabidopsis lyrata subsp.
lyrata GN=CAL PE=3 SV=1
Length = 256
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 57/93 (61%), Gaps = 3/93 (3%)
Query: 28 YQQEATKLRRQIREIQNLNRHILGEALSTLNFKELKNLEARLEKGIGRVRSKKNEMLLAE 87
+ E ++L+ +I ++ RH LGE L ++ K+L+NLE +LE + +RS+KN+++
Sbjct: 93 WSMEYSRLKAKIELLERNQRHYLGEDLEPMSLKDLQNLEQQLETALKHIRSRKNQLMYES 152
Query: 88 IEFMEKREIQLQNDNMYLRARISENE---RAQQ 117
+ ++++E ++Q +N L +I E E R QQ
Sbjct: 153 LNHLQRKENEIQEENSMLTKQIKERENILRTQQ 185
>sp|Q39685|CMB1_DIACA MADS-box protein CMB1 OS=Dianthus caryophyllus GN=CMB1 PE=2 SV=1
Length = 233
Score = 54.7 bits (130), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 75/133 (56%), Gaps = 4/133 (3%)
Query: 3 TIDRYKKACADSSNPGSITEANTQFYQQEATKLRRQIREIQNLNRHILGEALSTLNFKEL 62
T++RY++ C+ S S T+ QE KL+ ++ +Q +R++LGE L L+ KEL
Sbjct: 66 TLERYQR-CSYGSLETSQPSKETESSYQEYLKLKAKVDVLQRSHRNLLGEDLGELSTKEL 124
Query: 63 KNLEARLEKGIGRVRSKKNEMLLAEIEFMEKREIQLQNDNMYLRARISENERAQQERQSE 122
+ LE +L+K + ++RS K + +L ++ ++K+E L N L+ ++ E+ R +
Sbjct: 125 EQLEHQLDKSLRQIRSIKTQHMLDQLADLQKKEEMLFESNRALKTKLEES--CASFRPNW 182
Query: 123 SMMQQGGGHVYEP 135
+ Q G G +EP
Sbjct: 183 DVRQPGDG-FFEP 194
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.128 0.345
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,815,157
Number of Sequences: 539616
Number of extensions: 2292337
Number of successful extensions: 8185
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 119
Number of HSP's successfully gapped in prelim test: 208
Number of HSP's that attempted gapping in prelim test: 7941
Number of HSP's gapped (non-prelim): 434
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 58 (26.9 bits)