Query 041836
Match_columns 574
No_of_seqs 9 out of 11
Neff 1.4
Searched_HMMs 13730
Date Mon Mar 25 19:13:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/041836.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/041836hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d3b7sa2 b.98.1.1 (A:1-208) Leu 6.9 64 0.0047 25.1 0.8 11 62-72 143-153 (208)
2 d1upta_ c.37.1.8 (A:) ADP-ribo 6.5 1E+02 0.0073 21.3 1.7 21 247-267 147-167 (169)
3 d1e0sa_ c.37.1.8 (A:) ADP-ribo 6.1 1.2E+02 0.0087 22.1 2.0 21 246-266 153-173 (173)
4 d1moza_ c.37.1.8 (A:) ADP-ribo 5.3 1.1E+02 0.0078 22.5 1.3 22 247-268 159-180 (182)
5 d2qtvb1 c.37.1.8 (B:24-189) SA 5.1 1.5E+02 0.011 19.9 1.9 18 247-264 149-166 (166)
6 d1z3xa2 a.261.1.1 (A:88-235) G 5.1 36 0.0026 28.0 -1.8 12 57-68 50-61 (148)
7 d1hh2p4 d.202.1.1 (P:1-126) Tr 4.7 1.8E+02 0.013 22.3 2.2 39 535-573 20-58 (126)
8 d1mkya1 c.37.1.8 (A:2-172) Pro 4.4 1.6E+02 0.012 21.2 1.7 25 247-271 145-169 (171)
9 d1p4ea1 a.60.9.1 (A:2-129) Flp 4.3 1.4E+02 0.0098 24.1 1.3 17 322-338 9-25 (128)
10 d1y6ia2 a.261.1.1 (A:83-233) M 4.3 53 0.0039 27.1 -1.3 12 57-68 50-61 (151)
No 1
>d3b7sa2 b.98.1.1 (A:1-208) Leukotriene A4 hydrolase N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.86 E-value=64 Score=25.14 Aligned_cols=11 Identities=36% Similarity=0.851 Sum_probs=8.8
Q ss_pred CCCCCCCCccc
Q 041836 62 NFPCTDVPAEV 72 (574)
Q Consensus 62 nfpctdvpaev 72 (574)
-|||.|=|..-
T Consensus 143 ~fPC~DeP~~K 153 (208)
T d3b7sa2 143 ILPCQDTPSVK 153 (208)
T ss_dssp TSCBCCSTTCC
T ss_pred EEEcCCCCCee
Confidence 59999998743
No 2
>d1upta_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARL1 [TaxId: 9606]}
Probab=6.47 E-value=1e+02 Score=21.30 Aligned_cols=21 Identities=19% Similarity=0.314 Sum_probs=17.7
Q ss_pred cccccccHHHHHHHHhhcccc
Q 041836 247 PAATNVNVQEVIEKVNNHIKE 267 (574)
Q Consensus 247 paatnvnvqeviekvnnhike 267 (574)
-|.++.||+++++.+-++|++
T Consensus 147 SA~~g~gv~e~~~~l~~~l~~ 167 (169)
T d1upta_ 147 SATKGTGLDEAMEWLVETLKS 167 (169)
T ss_dssp CTTTCTTHHHHHHHHHHHHHT
T ss_pred eCCCCCCHHHHHHHHHHHHHh
Confidence 467899999999999888764
No 3
>d1e0sa_ c.37.1.8 (A:) ADP-ribosylation factor {Human (Homo sapiens), ARF6 [TaxId: 9606]}
Probab=6.08 E-value=1.2e+02 Score=22.12 Aligned_cols=21 Identities=14% Similarity=0.097 Sum_probs=18.1
Q ss_pred CcccccccHHHHHHHHhhccc
Q 041836 246 EPAATNVNVQEVIEKVNNHIK 266 (574)
Q Consensus 246 epaatnvnvqeviekvnnhik 266 (574)
--|.|+-||.|+++.+-+|+|
T Consensus 153 ~SA~tg~gv~e~~~~l~~~~k 173 (173)
T d1e0sa_ 153 SCATSGDGLYEGLTWLTSNYK 173 (173)
T ss_dssp CBTTTTBTHHHHHHHHHHHCC
T ss_pred eeCCCCcCHHHHHHHHHHhcC
Confidence 357889999999999998876
No 4
>d1moza_ c.37.1.8 (A:) ADP-ribosylation factor {Baker's yeast (Saccharomyces cerevisiae), ARL1 [TaxId: 4932]}
Probab=5.29 E-value=1.1e+02 Score=22.51 Aligned_cols=22 Identities=27% Similarity=0.305 Sum_probs=18.6
Q ss_pred cccccccHHHHHHHHhhccccc
Q 041836 247 PAATNVNVQEVIEKVNNHIKEE 268 (574)
Q Consensus 247 paatnvnvqeviekvnnhikee 268 (574)
-|.++.||.++++.+-++|++.
T Consensus 159 SA~~g~gv~e~~~~l~~~i~~~ 180 (182)
T d1moza_ 159 SAIKGEGITEGLDWLIDVIKEE 180 (182)
T ss_dssp BGGGTBTHHHHHHHHHHHHHHH
T ss_pred ECCCCCCHHHHHHHHHHHHHHc
Confidence 4678899999999999998764
No 5
>d2qtvb1 c.37.1.8 (B:24-189) SAR1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=5.09 E-value=1.5e+02 Score=19.94 Aligned_cols=18 Identities=6% Similarity=0.001 Sum_probs=14.6
Q ss_pred cccccccHHHHHHHHhhc
Q 041836 247 PAATNVNVQEVIEKVNNH 264 (574)
Q Consensus 247 paatnvnvqeviekvnnh 264 (574)
-|.|+.+|+|+++.+-.|
T Consensus 149 SA~tg~Gv~e~~~~l~~~ 166 (166)
T d2qtvb1 149 SVVMRNGYLEAFQWLSQY 166 (166)
T ss_dssp BTTTTBSHHHHHHHHTTC
T ss_pred eCCCCCCHHHHHHHHhCC
Confidence 567889999999988655
No 6
>d1z3xa2 a.261.1.1 (A:88-235) GUN4-like protein Ycf53 {Thermosynechococcus elongatus [TaxId: 146786]}
Probab=5.07 E-value=36 Score=28.01 Aligned_cols=12 Identities=25% Similarity=0.642 Sum_probs=7.8
Q ss_pred ecccCCCCCCCC
Q 041836 57 VEKVDNFPCTDV 68 (574)
Q Consensus 57 vekvdnfpctdv 68 (574)
.+.+.+|||.|+
T Consensus 50 ~~di~~fPc~dL 61 (148)
T d1z3xa2 50 FTEVEQLPIPDL 61 (148)
T ss_dssp HHHHHTSCHHHH
T ss_pred HHHHhhCCHHHH
Confidence 345677788765
No 7
>d1hh2p4 d.202.1.1 (P:1-126) Transcription factor NusA, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=4.67 E-value=1.8e+02 Score=22.31 Aligned_cols=39 Identities=10% Similarity=0.239 Sum_probs=28.3
Q ss_pred cchhHHHHHHHHhhhhhhhccCCCCCccccccccCCCCC
Q 041836 535 SGNLLSKVKQSLGKVKKAIVGKSPSSKTLQSEAKGDENI 573 (574)
Q Consensus 535 SNNiisKVKQSLVKaKKAI~GKSPssKtlssdaKGDiKV 573 (574)
...|+..++++|.+|-|...|....-..---.-+|+++|
T Consensus 20 ~e~v~~aie~al~~A~kk~~g~~~~~~v~id~~tG~i~v 58 (126)
T d1hh2p4 20 KEEVIPILEKALVSAYRKNFGNSKNVEVVIDRNTGNIKV 58 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSSSCEEEECCSTTCCCEE
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccceEEEEecCCCcEEE
Confidence 457899999999999998888554444444456677654
No 8
>d1mkya1 c.37.1.8 (A:2-172) Probable GTPase Der, N-terminal and middle domains {Thermotoga maritima [TaxId: 2336]}
Probab=4.39 E-value=1.6e+02 Score=21.20 Aligned_cols=25 Identities=24% Similarity=0.454 Sum_probs=20.2
Q ss_pred cccccccHHHHHHHHhhcccccccc
Q 041836 247 PAATNVNVQEVIEKVNNHIKEETDD 271 (574)
Q Consensus 247 paatnvnvqeviekvnnhikeetdd 271 (574)
-|.++.|+.++++.+-+||.+..-|
T Consensus 145 SAk~g~gid~L~~~i~~~l~e~~~~ 169 (171)
T d1mkya1 145 SAEHNINLDTMLETIIKKLEEKGLD 169 (171)
T ss_dssp BTTTTBSHHHHHHHHHHHHHHTTCC
T ss_pred ecCCCCCHHHHHHHHHHhCCCCCCC
Confidence 3568999999999999999876543
No 9
>d1p4ea1 a.60.9.1 (A:2-129) Flp recombinase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.31 E-value=1.4e+02 Score=24.09 Aligned_cols=17 Identities=47% Similarity=0.956 Sum_probs=14.8
Q ss_pred CCchhhHHHHHHHhhhc
Q 041836 322 EPSKVIVEEFAEKFEKD 338 (574)
Q Consensus 322 epskviveefaekfekd 338 (574)
.|.||+|..|.+.|++.
T Consensus 9 tppkvlvrqfverferp 25 (128)
T d1p4ea1 9 TPPKVLVRQFVERFERP 25 (128)
T ss_dssp SCHHHHHHHHHHTTTTT
T ss_pred CCcHHHHHHHHHHhcCC
Confidence 47899999999999864
No 10
>d1y6ia2 a.261.1.1 (A:83-233) Mg-chelatase cofactor Gun4 {Synechocystis sp. pcc 6803 [TaxId: 1148]}
Probab=4.25 E-value=53 Score=27.08 Aligned_cols=12 Identities=33% Similarity=0.789 Sum_probs=8.8
Q ss_pred ecccCCCCCCCC
Q 041836 57 VEKVDNFPCTDV 68 (574)
Q Consensus 57 vekvdnfpctdv 68 (574)
.+.+.+|||.|+
T Consensus 50 ~~di~~fPc~DL 61 (151)
T d1y6ia2 50 FTEVEKFPALDL 61 (151)
T ss_dssp HHHHTTSCHHHH
T ss_pred HHHHHhCCHHHH
Confidence 455788888875
Done!