BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041841
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q1L8L6|RN19B_DANRE E3 ubiquitin-protein ligase RNF19B OS=Danio rerio GN=rnf19b PE=3
SV=2
Length = 701
Score = 50.1 bits (118), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/169 (22%), Positives = 63/169 (37%), Gaps = 23/169 (13%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGNALCE 125
+C+ + +L ++ CS+ C C+ +Y+ ++ ES + CP + ++ W AL
Sbjct: 109 LCLVRQPAEQLPELQGCSHRSCLCCLRQYLRIEITESRVQLSCPECAERLAP-WQVALIL 167
Query: 126 GVINGAEKF----------------YCPFKDCSALLINDGLKNMKE--SKRPYCKRMFCA 167
N EK+ +CP DC +I G + +R C FC
Sbjct: 168 DDPNLMEKYEEFLLRRCLASDPDCRWCPAPDCGFAVIASGCASCPRLVCRREGCGAEFCY 227
Query: 168 QCKVPWHAGMRCEKFRKLN----KNEKNSEDMELIKLAEEKKWKRCPHC 212
CK WH C+ R+ + N + K CP C
Sbjct: 228 HCKQAWHPNQTCDSARQQRALSLRTHSNHSPSYTAEQGHTDDIKPCPRC 276
>sp|A4IIY1|R144A_XENTR Probable E3 ubiquitin-protein ligase RNF144A OS=Xenopus tropicalis
GN=rnf144a PE=2 SV=1
Length = 292
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 73/172 (42%), Gaps = 22/172 (12%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRCP--------------- 109
+C+ + ++ +I C +CT C+ +YV+ ++E + T+I CP
Sbjct: 22 LCLGEYTVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDASCPKRGHLQENEI 81
Query: 110 --IVPKEVSDRWGNALCEG-VINGAEKFYCPFKDCSAL--LINDGLKNMKESKRPYCKRM 164
+V E+ ++ E ++ + +CP C A+ L G++N + + C
Sbjct: 82 ECMVAAEIMQKYKKLQFEKEILLDPCRTWCPSSSCQAVCKLQEKGIQNPQLVQCSACDIE 141
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ CK WH G C + + +S L ++ KRCP C +
Sbjct: 142 FCSACKANWHPGQGCPENMAITFLPGDSSSF-FKSLEDDVPIKRCPKCKVYI 192
>sp|P50876|R144A_HUMAN Probable E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens
GN=RNF144A PE=1 SV=2
Length = 292
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 73/173 (42%), Gaps = 24/173 (13%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRCP--------------- 109
+C+ ++ +I C +CT C+ +YV+ ++E + T+I CP
Sbjct: 22 LCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEI 81
Query: 110 --IVPKEVSDRWGNALCE-GVINGAEKFYCPFKDCSAL--LINDGLKNMKESKRPYCKRM 164
+V E+ R+ E V+ + +CP C A+ L + GL+ + + C+
Sbjct: 82 ECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPVQCKACRME 141
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAE-EKKWKRCPHCNYSV 216
FC+ CK WH G C + + E K+ E + KRCP C +
Sbjct: 142 FCSTCKASWHPGQGCPETMPITF--LPGETSAAFKMEEDDAPIKRCPKCKVYI 192
>sp|Q925F3|R144A_MOUSE Probable E3 ubiquitin-protein ligase RNF144A OS=Mus musculus
GN=Rnf144a PE=1 SV=1
Length = 292
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 72/173 (41%), Gaps = 24/173 (13%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRCP--------------- 109
+C+ ++ +I C +CT C+ +YV+ ++E + T+I CP
Sbjct: 22 LCLGEYPAEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQENEI 81
Query: 110 --IVPKEVSDRWGNALCE-GVINGAEKFYCPFKDCSAL--LINDGLKNMKESKRPYCKRM 164
+V E+ R+ E V+ + +CP C A+ L + GL+ + + C
Sbjct: 82 ECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDIGLQTPQLVQCKACDME 141
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAE-EKKWKRCPHCNYSV 216
FC+ CK WH G C + + E K+ E + KRCP C +
Sbjct: 142 FCSACKARWHPGQGCPETMPITF--LPGETSSAFKMEEGDAPIKRCPKCRVYI 192
>sp|Q08B84|RN19B_XENLA E3 ubiquitin-protein ligase RNF19B OS=Xenopus laevis GN=rnf19b PE=2
SV=2
Length = 687
Score = 44.7 bits (104), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 58/136 (42%), Gaps = 17/136 (12%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGNALCE 125
+C+ + E+ + C + C C+ +Y+ ++ ES ++RCP + +S + A+
Sbjct: 97 LCLVRQPPEEIPELLSCRHRSCLRCLRQYLRIEICESRVNLRCPECAERLSPQHVRAILR 156
Query: 126 G--VINGAEKF-------------YCPFKDCSALLINDGLKNMKE--SKRPYCKRMFCAQ 168
+ E+F +CP DC +I G + + +R C+ FC
Sbjct: 157 DPLLTRKYEEFLLRRCLAADPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCRTEFCYH 216
Query: 169 CKVPWHAGMRCEKFRK 184
CK WH C+ R+
Sbjct: 217 CKHVWHPNQTCDMARQ 232
>sp|Q6DH94|R1442_DANRE Probable E3 ubiquitin-protein ligase RNF144A-B OS=Danio rerio
GN=rnf144ab PE=2 SV=1
Length = 293
Score = 43.9 bits (102), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 69/172 (40%), Gaps = 21/172 (12%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRCP--------------- 109
+C+ ++ +I C +C+ C+ +YV+ ++E + T+I CP
Sbjct: 22 LCLGEFPLEQMTTISQCQCIFCSLCLKQYVELLIKEGLETAISCPDSACPKQGHLLENEI 81
Query: 110 --IVPKEVSDRWGNALCE-GVINGAEKFYCPFKDCSALL-INDGLKNMKESKR-PYCKRM 164
+V EV + E V+ + +CP C A+ +N+ + + + P C
Sbjct: 82 ECMVAGEVMQHYKRLQFEREVLLDPCRTWCPSSSCQAVCQLNEAEVQLPQPVQCPECSLR 141
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ C+ H G C++ + L +E KRCP C +
Sbjct: 142 FCSACRADCHTGQACQEMLPITTFLPGENGSNLKSQEDEAPIKRCPKCKVYI 193
>sp|P0CE10|Y4102_ARATH Putative uncharacterized protein At4g01020, chloroplastic
OS=Arabidopsis thaliana GN=At4g01020 PE=4 SV=1
Length = 1787
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/173 (20%), Positives = 75/173 (43%), Gaps = 31/173 (17%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRE-----------------SITSIRC 108
IC+ ++ +S+E CS+ +C C+++ ++ +R + +R
Sbjct: 1563 ICL--SEVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADMRA 1620
Query: 109 PIVPKEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY----CKR 163
+ +++ + +L V + K +C DC ++ G +ES P+ C
Sbjct: 1621 LLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYRVAG---PQESGEPFICGACHS 1677
Query: 164 MFCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
C +C + +H + CE+++K +N D+ L A+ K K CP C ++
Sbjct: 1678 ETCTRCHLEYHPLITCERYKKFKEN----PDLSLKDWAKGKDVKECPICKSTI 1726
>sp|Q96EP0|RNF31_HUMAN E3 ubiquitin-protein ligase RNF31 OS=Homo sapiens GN=RNF31 PE=1
SV=1
Length = 1072
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 41/182 (22%), Positives = 67/182 (36%), Gaps = 35/182 (19%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRES-ITSIRCPIV--PKEVSDR--- 118
++C N + ++ C + C DC ++ L+E IT + CP P D
Sbjct: 700 AVCGWALPHNRMQALTSCECTICPDCFRQHFTIALKEKHITDMVCPACGRPDLTDDTQLL 759
Query: 119 ---------------------WGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKES 156
+ L EGV+ KF +C CS I + + E+
Sbjct: 760 SYFSTLDIQLRESLEPDAYALFHKKLTEGVLMRDPKFLWC--AQCSFGFIYE--REQLEA 815
Query: 157 KRPYCKRMFCAQCKVPW---HAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCN 213
P C + FC +CK W H G CE F+ + + + + ++ CP C
Sbjct: 816 TCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRMNDPEYQAQGLAMYLQENGIDCPKCK 875
Query: 214 YS 215
+S
Sbjct: 876 FS 877
>sp|A2A7Q9|RN19B_MOUSE E3 ubiquitin-protein ligase RNF19B OS=Mus musculus GN=Rnf19b PE=1
SV=2
Length = 732
Score = 40.4 bits (93), Expect = 0.009, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 68 MEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGNALCEG- 126
+ P+ L S C + C DC+ Y+ ++ ES I CP + ++ L
Sbjct: 123 LPPERAPRLLS---CPHRSCRDCLRHYLRLEISESRVPISCPECSERLNPHDIRLLLADP 179
Query: 127 -VINGAEKF-------------YCPFKDCSALLINDGLKNMKE--SKRPYCKRMFCAQCK 170
+++ E+F +CP DC +I G + + +R C+ FC CK
Sbjct: 180 PLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQTEFCYHCK 239
Query: 171 VPWHAGMRCEKFRK 184
WH C+ R+
Sbjct: 240 QIWHPNQTCDMARQ 253
>sp|Q6ZMZ0|RN19B_HUMAN E3 ubiquitin-protein ligase RNF19B OS=Homo sapiens GN=RNF19B PE=1
SV=2
Length = 732
Score = 40.4 bits (93), Expect = 0.009, Method: Composition-based stats.
Identities = 32/134 (23%), Positives = 54/134 (40%), Gaps = 20/134 (14%)
Query: 68 MEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGNALCEG- 126
+ P+ L S C + C DC+ Y+ ++ ES I CP + ++ L
Sbjct: 126 LPPERAPRLLS---CPHRSCRDCLRHYLRLEISESRVPISCPECSERLNPHDIRLLLADP 182
Query: 127 -VINGAEKF-------------YCPFKDCSALLINDGLKNMKE--SKRPYCKRMFCAQCK 170
+++ E+F +CP DC +I G + + +R C+ FC CK
Sbjct: 183 PLMHKYEEFMLRRYLASDPDCRWCPAPDCGYAVIAYGCASCPKLTCEREGCQTEFCYHCK 242
Query: 171 VPWHAGMRCEKFRK 184
WH C+ R+
Sbjct: 243 QIWHPNQTCDMARQ 256
>sp|D3YYI7|RN217_MOUSE Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus
GN=Rnf217 PE=3 SV=2
Length = 515
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 44/216 (20%), Positives = 91/216 (42%), Gaps = 40/216 (18%)
Query: 33 INLEDYYDDDDDLHVLNFL--PNDTHFGKRKRPFS--------ICMEPKSTNELFSIEFC 82
I LE +Y + V L P + G P++ +C+E K L C
Sbjct: 196 IELE-FYLAPEPFSVPGLLGAPPYSGLGGVGDPYAPLMVLMCRVCLEDKPIKPL---PCC 251
Query: 83 SYSYCTDCIVKYVDSKLRESITSIRCPI---------------VPKEVSDRWGNALCEGV 127
+ C +C+ Y+ S+++ I+CP+ + E S ++ L G
Sbjct: 252 KKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTVVYNLTHEDSIKYKYFLELGR 311
Query: 128 INGAEK------FYCPFKDCSALLINDGLKNMKESKRPYCKRMFCAQCKVPWHAGMRCEK 181
I+ + K + FK + ++ + + P C+ ++C +C PWH G+ C++
Sbjct: 312 IDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPTCQLIWCFKCHSPWHEGVNCKE 371
Query: 182 FRKLNKNEKN-SEDMELIKLAEEKKWKRCPHCNYSV 216
++K +K ++ + ++E ++ ++CP C +
Sbjct: 372 YKKGDKLLRHWASEIE----HGQRNAQKCPKCKIHI 403
>sp|Q5RFV4|R1441_DANRE Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio
GN=rnf144aa PE=3 SV=1
Length = 293
Score = 39.7 bits (91), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 66/172 (38%), Gaps = 21/172 (12%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRCP--------------- 109
+C+ ++ +I C +CT C+ +YV+ ++E T+I CP
Sbjct: 22 LCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQENEI 81
Query: 110 --IVPKEVSDRWGNALCEG-VINGAEKFYCPFKDCSALL-INDGLKNMKESKR-PYCKRM 164
+V E+ R+ E V+ + +CP C A+ + + + + R C
Sbjct: 82 ECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKESDTVLPQLVRCSVCTLE 141
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ CK WH C++ + ++ KRCP C +
Sbjct: 142 FCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIKRCPKCKVYI 193
>sp|P36113|YKZ7_YEAST RING finger protein YKR017C OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=YKR017C PE=1 SV=1
Length = 551
Score = 38.9 bits (89), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 76/174 (43%), Gaps = 29/174 (16%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRES--ITSIRCPIVPK--EVSDRWGN 121
IC + K T E F++E C + YC +C Y+ KL E IT + C + K ++ G+
Sbjct: 181 ICCDKKDT-ETFALE-CGHEYCINCYRHYIKDKLHEGNIITCMDCSLALKNEDIDKVMGH 238
Query: 122 ALCEGVINGAEKFY----------CPFKDCSALLINDGLKNMKESKR----PYCK----R 163
+++ + K + CPF DC +++ ++ E R P+ K
Sbjct: 239 PSSSKLMDSSIKSFVQKHNRNYKWCPFADCKSIVHLRDTSSLPEYTRLHYSPFVKCNSFH 298
Query: 164 MFCAQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC C H+ C+ + K K SE + + L+ K+ CP C+ ++
Sbjct: 299 RFCFNCGFEVHSPADCKITTAWVKKARKESEILNWV-LSHTKE---CPKCSVNI 348
>sp|Q7Z419|R144B_HUMAN E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens GN=RNF144B PE=1
SV=1
Length = 303
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITS-IRCP--------------- 109
+C+ +S +++ +++ C +CT C+ +Y+ +RE S I CP
Sbjct: 32 LCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEI 91
Query: 110 --IVPKEVSDRWGNALCEGVIN-GAEKFYCPFKDCSALL----INDGLKNMKESKRPYCK 162
+VP + + E ++ + +CP DC + + G + E P C
Sbjct: 92 ACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVLVEC--PSCH 149
Query: 163 RMFCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ CK WHA + C R +E L E K+CP C +
Sbjct: 150 LKFCSCCKDAWHAEVSC---RDSQPIVLPTEHRALFGTDAEAPIKQCPVCRVYI 200
>sp|O76924|ARI2_DROME Protein ariadne-2 OS=Drosophila melanogaster GN=ari-2 PE=2 SV=1
Length = 509
Score = 38.5 bits (88), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 76/170 (44%), Gaps = 31/170 (18%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITS----------IRCP------ 109
+C + ++ +S+ C +S+C DC Y ++++ + I++ +R P
Sbjct: 155 VCASSQLGDKFYSLA-CGHSFCKDCWTIYFETQIFQGISTQIGCMAQMCNVRVPEDLVLT 213
Query: 110 IVPKEV-SDRWGN-ALCEGVINGAEKFYCPFKDCSALLINDGLKNMKESKRPYCK---RM 164
+V + V D++ A + V + E +CP +C ++ + + +KR CK
Sbjct: 214 LVTRPVMRDKYQQFAFKDYVKSHPELRFCPGPNCQIIVQSSEIS----AKRAICKACHTG 269
Query: 165 FCAQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCN 213
FC +C + +HA C+ +K L K +SE I K CP C+
Sbjct: 270 FCFRCGMDYHAPTDCQVIKKWLTKCADDSETANYISAHT----KDCPKCH 315
>sp|Q2VJ60|RN19A_PIG E3 ubiquitin-protein ligase RNF19A OS=Sus scrofa GN=RNF19A PE=2
SV=1
Length = 838
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 29/142 (20%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGN---- 121
+C+ S + I C + C DC+ +Y+ ++ ES +I CP E ++R+
Sbjct: 134 LCLLRHSKDRFPEIMTCHHRSCVDCLRQYLRIEISESRVNISCP----ECTERFNPHDIR 189
Query: 122 -ALCEGVINGAEKF----------------YCPFKDCSALLINDGLKNMKESK--RPYCK 162
L + V+ EK+ +CP DC +I G + + R C
Sbjct: 190 LILSDDVL--MEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 247
Query: 163 RMFCAQCKVPWHAGMRCEKFRK 184
FC CK WH C+ R+
Sbjct: 248 TEFCYHCKQIWHPNQTCDAARQ 269
>sp|Q9NV58|RN19A_HUMAN E3 ubiquitin-protein ligase RNF19A OS=Homo sapiens GN=RNF19A PE=1
SV=3
Length = 838
Score = 37.7 bits (86), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 29/142 (20%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGN---- 121
+C+ S + I C + C DC+ +Y+ ++ ES +I CP E ++R+
Sbjct: 134 LCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCP----ECTERFNPHDIR 189
Query: 122 -ALCEGVINGAEKF----------------YCPFKDCSALLINDGLKNMKESK--RPYCK 162
L + V+ EK+ +CP DC +I G + + R C
Sbjct: 190 LILSDDVL--MEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 247
Query: 163 RMFCAQCKVPWHAGMRCEKFRK 184
FC CK WH C+ R+
Sbjct: 248 TEFCYHCKQIWHPNQTCDAARQ 269
>sp|P50636|RN19A_MOUSE E3 ubiquitin-protein ligase RNF19A OS=Mus musculus GN=Rnf19a PE=1
SV=2
Length = 840
Score = 37.7 bits (86), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 57/142 (40%), Gaps = 29/142 (20%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPIVPKEVSDRWGN---- 121
+C+ S + I C + C DC+ +Y+ ++ ES +I CP E ++R+
Sbjct: 134 LCLLRHSKDRFPDIMTCHHRSCVDCLRQYLRIEISESRVNISCP----ECTERFNPHDIR 189
Query: 122 -ALCEGVINGAEKF----------------YCPFKDCSALLINDGLKNMKESK--RPYCK 162
L + V+ EK+ +CP DC +I G + + R C
Sbjct: 190 LILSDDVL--MEKYEEFMLRRWLVADPDCRWCPAPDCGYAVIAFGCASCPKLTCGREGCG 247
Query: 163 RMFCAQCKVPWHAGMRCEKFRK 184
FC CK WH C+ R+
Sbjct: 248 TEFCYHCKQIWHPNQTCDAARQ 269
>sp|Q9UBS8|RNF14_HUMAN E3 ubiquitin-protein ligase RNF14 OS=Homo sapiens GN=RNF14 PE=1
SV=1
Length = 474
Score = 37.7 bits (86), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 85/222 (38%), Gaps = 30/222 (13%)
Query: 8 GTTKNTAISIEQCNEQRGLQSAQNLINLEDYYDDDDDLHVLNFLPNDTHFGKRKRPFSIC 67
G + + E+ ++R +Q ++L NL D D + F + SIC
Sbjct: 170 GGAAGSDVDQEEIVDERAVQDVESLSNLIQEILDFDQAQQIK------CFNSKLFLCSIC 223
Query: 68 MEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRES-ITSIRCP---------------IV 111
K +E C + YC C+ Y + ++R+ + + CP +V
Sbjct: 224 FCEKLGSECMYFLECRHVYCKACLKDYFEIQIRDGQVQCLNCPEPKCPSVATPGQVKELV 283
Query: 112 PKEVSDRWGNALCEGVIN-GAEKFYCPFKDCSALLINDGLKNMKESKRPYCKRMFCAQCK 170
E+ R+ L + ++ A+ YCP C ++ + M C FC C+
Sbjct: 284 EAELFARYDRLLLQSSLDLMADVVYCPRPCCQLPVMQEPGCTMGICSS--CNFAFCTLCR 341
Query: 171 VPWHAGMRC----EKFRKLNKNEKNSEDMELIKLAEEKKWKR 208
+ +H C EK L +NE D +L +++ KR
Sbjct: 342 LTYHGVSPCKVTAEKLMDL-RNEYLQADEANKRLLDQRYGKR 382
>sp|Q4KLT0|RN217_XENLA Probable E3 ubiquitin-protein ligase RNF217 OS=Xenopus laevis
GN=rnf217 PE=2 SV=1
Length = 282
Score = 37.4 bits (85), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 34/173 (19%), Positives = 77/173 (44%), Gaps = 29/173 (16%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCPI--------------- 110
+C+E +S L C C +C+ +Y+ S+++ I+CPI
Sbjct: 5 VCLEDRSIKPL---PCCKKPVCDECLKRYLSSQVQLGQAEIQCPITECNKHLDESTILYS 61
Query: 111 VPKEVSDRWGNALCEGVINGAEK------FYCPFKDCSALLINDGLKNMKESKRPYCKRM 164
+P + ++ L ++ + K + FK + + +N + + P C+ +
Sbjct: 62 LPHDDIIKYKYFLELSRMDSSTKPCPQCKHFTTFKRKTHIPNPTKSENKLKIQCPSCQFI 121
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKN-SEDMELIKLAEEKKWKRCPHCNYSV 216
+C +C PWH G+ C +++K +K ++ + ++E ++ ++CP C +
Sbjct: 122 WCFRCHAPWHEGVNCREYKKGDKLLRHWANEIE----HGQRNAQKCPRCKVHI 170
>sp|A5PK27|R144B_BOVIN E3 ubiquitin-protein ligase RNF144B OS=Bos taurus GN=RNF144B PE=2
SV=1
Length = 304
Score = 37.4 bits (85), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 69/174 (39%), Gaps = 28/174 (16%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITS-IRCP--------------- 109
+C+ +S +++ +++ C +CT C+ +Y+ +RE S I CP
Sbjct: 33 LCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQEAEI 92
Query: 110 --IVPKEVSDRWGNALCEGVIN-GAEKFYCPFKDCSAL----LINDGLKNMKESKRPYCK 162
+VP + + E ++ + +CP DC + + G + E P C
Sbjct: 93 ACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVLVEC--PSCH 150
Query: 163 RMFCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ CK WHA + C R +E L + K+CP C +
Sbjct: 151 LKFCSCCKDAWHAEVSC---RDSQPGILPTEHGTLFGTETDAPIKQCPVCRVYI 201
>sp|Q924T7|RNF31_MOUSE E3 ubiquitin-protein ligase RNF31 OS=Mus musculus GN=Rnf31 PE=1
SV=2
Length = 1066
Score = 37.4 bits (85), Expect = 0.086, Method: Composition-based stats.
Identities = 17/64 (26%), Positives = 28/64 (43%), Gaps = 3/64 (4%)
Query: 155 ESKRPYCKRMFCAQCKVPW---HAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPH 211
E+ P C + FC +CK W H G CE F+ + + + + ++ CP
Sbjct: 808 EATCPQCHQTFCVRCKRQWEEQHRGRSCEDFQNWKRTNDPEYQAQGLAMYLQENGIDCPK 867
Query: 212 CNYS 215
C +S
Sbjct: 868 CKFS 871
>sp|Q9SKC3|ARI9_ARATH Probable E3 ubiquitin-protein ligase ARI9 OS=Arabidopsis thaliana
GN=ARI9 PE=2 SV=1
Length = 543
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 24/167 (14%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIR--CP------------- 109
IC E + E+ + C + YC C Y+ +K+ + +R CP
Sbjct: 129 GICFESYTREEIARVS-CGHPYCKTCWAGYITTKIEDGPGCLRVKCPEPSCSAAVGKDMI 187
Query: 110 --IVPKEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFC 166
+ +V++++ + + +K +CP C + G ++ C FC
Sbjct: 188 EDVTETKVNEKYSRYILRSYVEDGKKIKWCPSPGCGYAVEFGGSESSSYDVSCLCSYRFC 247
Query: 167 AQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHC 212
C H+ + C+ K + KN+ SE+ + LA K CP C
Sbjct: 248 WNCSEDAHSPVDCDTVSKWIFKNQDESENKNWM-LANSKP---CPEC 290
>sp|Q6NW85|ARI1L_DANRE E3 ubiquitin-protein ligase arih1l OS=Danio rerio GN=arih1l PE=2
SV=1
Length = 533
Score = 35.8 bits (81), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 80/216 (37%), Gaps = 44/216 (20%)
Query: 35 LEDYYDDDDD-----LHVLN------FLPNDTHFGKRKRPFSICMEPKSTNELFSIEFCS 83
+E Y+D + D HV+N P T + P IC N F+ C
Sbjct: 122 MERYFDGNLDKLFSECHVINPSKKPKTRPMSTRSSSQDLPCQICY-LNYPNSYFTGLECG 180
Query: 84 YSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEVSDRWGNALCE 125
+ +C C Y+ +K+ E +I CP I +V ++ + +
Sbjct: 181 HKFCMQCWGDYLTTKIIEEGMGQTISCPAHNCDILVDDNTVMRLITDSKVKLKYQHLITN 240
Query: 126 GVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKVPWHAGMRCEK 181
+ +CP DC ++ K +P C R FC C WH ++C+
Sbjct: 241 SFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGENWHDPVKCKW 295
Query: 182 FRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
RK + K + +SE I K CP C+ ++
Sbjct: 296 LRKWIKKCDDDSETSNWIAANT----KECPKCHVTI 327
>sp|Q9Z1K6|ARI2_MOUSE E3 ubiquitin-protein ligase ARIH2 OS=Mus musculus GN=Arih2 PE=2
SV=1
Length = 492
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 67/168 (39%), Gaps = 25/168 (14%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRC--------------- 108
++CM+ L S+ C + +C C ++ +++ + I C
Sbjct: 139 AVCMQFVRKENLLSLA-CQHQFCRSCWEQHCSVLVKDGVGVGISCMAQDCPLRTPEDFVF 197
Query: 109 PIVP-KEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFC 166
P++P +E+ D++ L + + CP DC ++I + + C +FC
Sbjct: 198 PLLPNEELRDKYRRYLFRDYVESHFQLQLCPGADC-PMVIRVQEPRARRVQCNRCSEVFC 256
Query: 167 AQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCN 213
+C+ +HA C RK L K +SE I K CP CN
Sbjct: 257 FKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHT----KDCPKCN 300
>sp|Q9P3U4|YKX2_SCHPO Uncharacterized RING finger protein C328.02 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPAC328.02 PE=3 SV=1
Length = 504
Score = 35.0 bits (79), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 36/162 (22%), Positives = 64/162 (39%), Gaps = 26/162 (16%)
Query: 76 LFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCP---------------IVPKEVSDRWG 120
FS E C + +C C +Y+DS++ E + I+CP ++ ++ DR+
Sbjct: 142 FFSAE-CDHEFCLACYRQYLDSRISEGESVIQCPEESCTQIVSIQSITKVLDEKSLDRYH 200
Query: 121 NALCEGVINGAEKF-YCPFKDCSALL----INDGLKNMKESKRPYCKRMFCAQCKVPWHA 175
L ++ + +CP DC + L ++ + C + FC C H
Sbjct: 201 RLLDRSFVDDNDHLRWCPAPDCEFAIECHVTQASLSSVVPTVTCNCGKQFCFGCGHDNHQ 260
Query: 176 GMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
C + L K + +SE I K CP C+ ++
Sbjct: 261 PTICPLVKIWLQKCQDDSETANWI----HANTKECPKCSTTI 298
>sp|Q32NS4|ARI1_XENLA E3 ubiquitin-protein ligase arih1 OS=Xenopus laevis GN=arih1 PE=2
SV=1
Length = 529
Score = 34.3 bits (77), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C +Y+ +K+ E +I CP I +V
Sbjct: 167 NSYFTGLECGHKFCMQCWGEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKV 226
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 227 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVHCKCGRQFCFNCGE 281
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ RK + K + +SE I K CP C+ ++
Sbjct: 282 NWHDPVKCKWLRKWIKKCDDDSETSNWIAANT----KECPKCHVTI 323
>sp|Q8TC41|RN217_HUMAN Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens
GN=RNF217 PE=2 SV=3
Length = 275
Score = 34.3 bits (77), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 159 PYCKRMFCAQCKVPWHAGMRCEKFRKLNKNEKN-SEDMELIKLAEEKKWKRCPHCNYSV 216
P C+ ++C +C PWH G+ C++++K +K ++ + ++E ++ ++CP C +
Sbjct: 84 PTCQFVWCFKCHSPWHEGVNCKEYKKGDKLLRHWASEIE----HGQRNAQKCPKCKIHI 138
>sp|Q6PFJ9|ARI1_DANRE E3 ubiquitin-protein ligase arih1 OS=Danio rerio GN=arih1 PE=2 SV=1
Length = 527
Score = 34.3 bits (77), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 63/166 (37%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C Y+ +K+ E +I CP I +V
Sbjct: 165 NSYFTGLECGHKFCMQCWGDYLTTKIIEEGMGQTISCPAHSCDILVDDNTVMRLITDSKV 224
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 225 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGE 279
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ RK + K + +SE I K CP C+ ++
Sbjct: 280 NWHDPVKCKWLRKWIKKCDDDSETSNWIAANT----KECPKCHVTI 321
>sp|O95376|ARI2_HUMAN E3 ubiquitin-protein ligase ARIH2 OS=Homo sapiens GN=ARIH2 PE=1
SV=1
Length = 493
Score = 33.9 bits (76), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 67/168 (39%), Gaps = 25/168 (14%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESI-TSIRC--------------- 108
++CM+ L S+ C + +C C ++ +++ + + C
Sbjct: 140 AVCMQFVRKENLLSLA-CQHQFCRSCWEQHCSVLVKDGVGVGVSCMAQDCPLRTPEDFVF 198
Query: 109 PIVP-KEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFC 166
P++P +E+ +++ L + + CP DC ++I + + C +FC
Sbjct: 199 PLLPNEELREKYRRYLFRDYVESHYQLQLCPGADC-PMVIRVQEPRARRVQCNRCNEVFC 257
Query: 167 AQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCN 213
+C+ +HA C RK L K +SE I K CP CN
Sbjct: 258 FKCRQMYHAPTDCATIRKWLTKCADDSETANYISAHT----KDCPKCN 301
>sp|Q9SKC2|ARI11_ARATH Probable E3 ubiquitin-protein ligase ARI11 OS=Arabidopsis thaliana
GN=ARI11 PE=2 SV=1
Length = 542
Score = 33.9 bits (76), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 63/167 (37%), Gaps = 24/167 (14%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIR--CP------------- 109
IC E + E+ + C + YC C Y+ +K+ + +R CP
Sbjct: 140 GICFESYTRKEIARVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMI 198
Query: 110 --IVPKEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFC 166
+ K+ D++ + +K +CP C + + C FC
Sbjct: 199 DEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCEYAVEFGVNGSSSYDVSCLCSYKFC 258
Query: 167 AQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHC 212
C H+ + CE K L KN+ SE+M I LA K K CP C
Sbjct: 259 WNCCEDAHSPVDCETVSKWLLKNKDESENMNWI-LA---KTKPCPKC 301
>sp|Q9FFN9|ARI13_ARATH Probable E3 ubiquitin-protein ligase ARI13 OS=Arabidopsis thaliana
GN=ARI13 PE=2 SV=1
Length = 536
Score = 33.9 bits (76), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 67/181 (37%), Gaps = 44/181 (24%)
Query: 76 LFSIEFCSYSYCTDCIVKYVDSK---LRESITSIRCP-------IVPKEV-------SDR 118
L S FCS+ +C C KY++ + ++ T I CP + P + +
Sbjct: 100 LISTPFCSHMFCKSCWRKYLEKNFYLVEKTQTRISCPHGACQAAVGPDTIQKLTVCDQEM 159
Query: 119 WGNALCEGVING---AEKFYCPFKDCSALLINDGLKNMKESKRPY-------CKRMFCAQ 168
+ + I G E YCP +DC+ ++ + + Y C +FC +
Sbjct: 160 YVEYILRSYIEGNKVLEIKYCPAQDCNYVIEFHQKNHDGADQEDYGFNVVCLCGHIFCWR 219
Query: 169 CKVPWHAGMRCEK-----FRKLNKNEKNSEDMELIKLAEEKKWKR------------CPH 211
C + H + C FR LN K S + L + E + K CPH
Sbjct: 220 CMLESHKPVTCNNASDWLFRDLNSLSKESGEKPLSLSSFETREKTYPLSSIKATKKVCPH 279
Query: 212 C 212
C
Sbjct: 280 C 280
>sp|Q94981|ARI1_DROME Protein ariadne-1 OS=Drosophila melanogaster GN=ari-1 PE=1 SV=2
Length = 503
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 49/215 (22%), Positives = 86/215 (40%), Gaps = 43/215 (20%)
Query: 35 LEDYYDDDDD-----LHVLNFLPNDTHFGKRKRPFS------ICMEPKSTNELFSIEFCS 83
LE Y+DD+ D HV+N N T K+K S IC + + +E C
Sbjct: 94 LEKYFDDNTDEFFKCAHVINPF-NATEAIKQKTSRSQCEECEICFSQLPPDSMAGLE-CG 151
Query: 84 YSYCTDCIVKYVDSKLRE-------SITSIRCPIVPKEVSD-----------RWGNALCE 125
+ +C C +Y+ +K+ S + C I+ +V+ ++ +
Sbjct: 152 HRFCMPCWHEYLSTKIVAEGLGQTISCAAHGCDILVDDVTVANLVTDARVRVKYQQLITN 211
Query: 126 GVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCK--RMFCAQCKVPWHAGMRCEKF 182
+ + +CP DC+ + E +R +CK +FC C WH ++C
Sbjct: 212 SFVECNQLLRWCPSVDCTYAV----KVPYAEPRRVHCKCGHVFCFACGENWHDPVKCRWL 267
Query: 183 RK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
+K + K + +SE I K CP C+ ++
Sbjct: 268 KKWIKKCDDDSETSNWIAANT----KECPRCSVTI 298
>sp|Q9Z1K5|ARI1_MOUSE E3 ubiquitin-protein ligase ARIH1 OS=Mus musculus GN=Arih1 PE=2
SV=3
Length = 555
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C +Y+ +K+ E +I CP I +V
Sbjct: 193 NSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKV 252
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 253 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGE 307
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ +K + K + +SE I K CP C+ ++
Sbjct: 308 NWHDPVKCKWLKKWIKKCDDDSETSNWIAANT----KECPKCHVTI 349
>sp|A2VEA3|ARI1_BOVIN E3 ubiquitin-protein ligase ARIH1 OS=Bos taurus GN=ARIH1 PE=2 SV=1
Length = 555
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C +Y+ +K+ E +I CP I +V
Sbjct: 193 NSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKV 252
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 253 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGE 307
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ +K + K + +SE I K CP C+ ++
Sbjct: 308 NWHDPVKCKWLKKWIKKCDDDSETSNWIAANT----KECPKCHVTI 349
>sp|Q9Y4X5|ARI1_HUMAN E3 ubiquitin-protein ligase ARIH1 OS=Homo sapiens GN=ARIH1 PE=1
SV=2
Length = 557
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C +Y+ +K+ E +I CP I +V
Sbjct: 195 NSYFTGLECGHKFCMQCWSEYLTTKIMEEGMGQTISCPAHGCDILVDDNTVMRLITDSKV 254
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 255 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGE 309
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ +K + K + +SE I K CP C+ ++
Sbjct: 310 NWHDPVKCKWLKKWIKKCDDDSETSNWIAANT----KECPKCHVTI 351
>sp|Q5N8G1|ISPD_ORYSJ 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase,
chloroplastic OS=Oryza sativa subsp. japonica GN=ISPD
PE=2 SV=1
Length = 297
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/51 (27%), Positives = 26/51 (50%)
Query: 99 LRESITSIRCPIVPKEVSDRWGNALCEGVINGAEKFYCPFKDCSALLINDG 149
LR T C + P+ + +WG+A+C +GA+ + S +L++ G
Sbjct: 33 LRRLRTGGSCAVAPRRHARKWGSAVCAAKADGAQGEAVKERSVSVVLLSGG 83
>sp|B1H1E4|ARI1_XENTR E3 ubiquitin-protein ligase arih1 OS=Xenopus tropicalis GN=arih1
PE=2 SV=1
Length = 529
Score = 33.1 bits (74), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 64/166 (38%), Gaps = 32/166 (19%)
Query: 74 NELFSIEFCSYSYCTDCIVKYVDSKLRESIT--SIRCP----------------IVPKEV 115
N F+ C + +C C +Y+ +K+ E +I CP I +V
Sbjct: 167 NSYFTGLECGHKFCMQCWSEYLTTKIIEEGMGQTISCPAHGCDILVDDNTVMRLITDSKV 226
Query: 116 SDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPY---CKRMFCAQCKV 171
++ + + + +CP DC ++ K +P C R FC C
Sbjct: 227 KLKYQHLITNSFVECNRLLKWCPAPDCHHVV-----KVQYPDAKPVRCKCGRQFCFNCGE 281
Query: 172 PWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
WH ++C+ +K + K + +SE I K CP C+ ++
Sbjct: 282 NWHDPVKCKWLKKWIKKCDDDSETSNWIAANT----KECPKCHVTI 323
>sp|Q9SKC4|ARI10_ARATH Probable E3 ubiquitin-protein ligase ARI10 OS=Arabidopsis thaliana
GN=ARI10 PE=2 SV=1
Length = 514
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 39/167 (23%), Positives = 64/167 (38%), Gaps = 26/167 (15%)
Query: 65 SICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIR--CP------------- 109
IC E + E+ S+ C + YC C Y+ +K+ + +R CP
Sbjct: 122 GICFESYTRKEIASVS-CGHPYCKTCWTGYITTKIEDGPGCLRVKCPEPSCYAVVGQDMI 180
Query: 110 --IVPKEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFC 166
+ K+ D++ + +K +CP C + + ++ C FC
Sbjct: 181 DEVTEKKDKDKYYRYFLRSYVEDGKKMKWCPSPGCECAV--EFGESSGYDVACLCSYRFC 238
Query: 167 AQCKVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHC 212
C H+ + CE K + KN+ SE+ I LA K CP C
Sbjct: 239 WNCSEDAHSPVDCETVSKWIFKNQDESENKNWI-LANSKP---CPKC 281
>sp|Q6T486|RBRA_DICDI Probable E3 ubiquitin-protein ligase rbrA OS=Dictyostelium
discoideum GN=rbrA PE=3 SV=1
Length = 520
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 69/169 (40%), Gaps = 28/169 (16%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITSIRCP---------------- 109
IC+E + F++ C++ YC C Y++ K+ E I P
Sbjct: 141 ICLEDYPPTQTFAL-ICNHRYCLPCYKNYLEIKVSEGPECIYTPCPAPKCKVIVHQDAFK 199
Query: 110 -IVPKEVSDRWGNALCEGVINGAEKF-YCPFKDCSALLINDGLKNMKESKRPYCKRMFCA 167
IV EV +R+ N + + ++ + +CP C + D K KE+ C +C
Sbjct: 200 QIVSPEVFERFNNFILKSYVDDNPQVKWCPAPGCIYSIRCD-RKERKEAVNCKCGFQYCF 258
Query: 168 QC---KVPWHAGMRCEKFRK-LNKNEKNSEDMELIKLAEEKKWKRCPHC 212
C ++ H C + K L K SE++ + LA KK CP C
Sbjct: 259 NCNDYEIGDHMPCPCSQVDKWLQKASDESENVTWM-LANTKK---CPEC 303
>sp|Q8BKD6|R144B_MOUSE E3 ubiquitin-protein ligase RNF144B OS=Mus musculus GN=Rnf144b PE=2
SV=2
Length = 301
Score = 32.0 bits (71), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 37/172 (21%), Positives = 65/172 (37%), Gaps = 26/172 (15%)
Query: 66 ICMEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRESITS-IRCP--------------- 109
+C+ +S +++ ++ C +CT C+ +Y+ +RE S I CP
Sbjct: 32 LCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQETEI 91
Query: 110 --IVPKEVSDRWGNALCEGVIN-GAEKFYCPFKDCSALL-INDGLKNMKE-SKRPYCKRM 164
+VP + + E ++ + +CP DC + I+ G + P C
Sbjct: 92 ACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVLVECPSCHLK 151
Query: 165 FCAQCKVPWHAGMRCEKFRKLNKNEKNSEDMELIKLAEEKKWKRCPHCNYSV 216
FC+ CK WH C + E L + K+CP C +
Sbjct: 152 FCSCCKDAWHEESSCR-----DSQSAMPEHGALFGTDADAPIKQCPVCRIYI 198
>sp|Q54CX4|Y5521_DICDI Uncharacterized protein DDB_G0292642 OS=Dictyostelium discoideum
GN=DDB_G0292642 PE=4 SV=2
Length = 903
Score = 31.6 bits (70), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 3/46 (6%)
Query: 66 IC-MEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRES-ITSIRCP 109
IC ME +NE+F++E C + YC DCI +++ + E + I CP
Sbjct: 618 ICYMEYDQSNEVFTLE-CDHVYCFDCITEHLRILITEGRVLDISCP 662
>sp|Q9JI90|RNF14_MOUSE E3 ubiquitin-protein ligase RNF14 OS=Mus musculus GN=Rnf14 PE=2
SV=2
Length = 485
Score = 31.2 bits (69), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 82/222 (36%), Gaps = 30/222 (13%)
Query: 8 GTTKNTAISIEQCNEQRGLQSAQNLINLEDYYDDDDDLHVLNFLPNDTHFGKRKRPFSIC 67
G + E+ ++R +Q ++L +L D N F + SIC
Sbjct: 171 GGAAAADVDQEETVDERAVQDVESLSSLIQEILD------FNQARQTKCFNSKLFLCSIC 224
Query: 68 MEPKSTNELFSIEFCSYSYCTDCIVKYVDSKLRES-ITSIRCP---------------IV 111
K ++ C + YC C+ Y + ++++ + + CP +V
Sbjct: 225 FCEKLGSDCMYFLECKHVYCKACLKDYFEIQIKDGQVKCLNCPEPQCPSVATPGQVKELV 284
Query: 112 PKEVSDRWGNALCEGVIN-GAEKFYCPFKDCSALLINDGLKNMKESKRPYCKRMFCAQCK 170
++ R+ L + ++ A+ YCP C ++ + M C FC C+
Sbjct: 285 EADLFARYDRLLLQSTLDLMADVVYCPRPCCQLPVMQEPGGTMAICSS--CNFAFCTLCR 342
Query: 171 VPWHAGMRC----EKFRKLNKNEKNSEDMELIKLAEEKKWKR 208
+ +H C EK L +NE D + E++ KR
Sbjct: 343 LTYHGLSPCKVTAEKLIDL-RNEYLQADEATKRFLEQRYGKR 383
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.438
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,868,023
Number of Sequences: 539616
Number of extensions: 3422580
Number of successful extensions: 8600
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 8529
Number of HSP's gapped (non-prelim): 91
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)