BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 041845
(143 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 121 bits (303), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 77/157 (49%), Positives = 90/157 (57%), Gaps = 30/157 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMW--RLKICIGA 58
LS RH HLVSLIG E EMIL+Y M G L+ HLY + P + W RL+ICIGA
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---ERQLRLLGSR---------- 105
ARGLHYLHT IIHRDVKS NILLDEN+V K + ++ LG
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 106 -------ILPAKLTEKSDVYSFG-----VLCARPAML 130
+ +LTEKSDVYSFG VLCAR A++
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 120 bits (302), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 88/157 (56%), Gaps = 30/157 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMW--RLKICIGA 58
LS RH HLVSLIG E EMIL+Y M G L+ HLY + P + W RL+ICIGA
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK----------------HSRERQLRLL 102
ARGLHYLHT IIHRDVKS NILLDEN+V K H L
Sbjct: 149 ARGLHYLHT---RAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 103 G----SRILPAKLTEKSDVYSFG-----VLCARPAML 130
G + +LTEKSDVYSFG VLCAR A++
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIV 242
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 86.7 bits (213), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 77/143 (53%), Gaps = 23/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
++ +H +LV L+G + ++ LVY M G+L D L + PPL W R KI GAA
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK--------HSRERQLRLLGSRI----- 106
G+++LH N IHRD+KS NILLDE + AK S + ++ SRI
Sbjct: 144 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTA 200
Query: 107 ------LPAKLTEKSDVYSFGVL 123
L ++T KSD+YSFGV+
Sbjct: 201 YMAPEALRGEITPKSDIYSFGVV 223
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 85.9 bits (211), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
++ +H +LV L+G + ++ LVY M G+L D L + PPL W R KI GAA
Sbjct: 84 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 143
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS-------RER------QLRLLGS-- 104
G+++LH N IHRD+KS NILLDE + AK S E+ R++G+
Sbjct: 144 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTA 200
Query: 105 ----RILPAKLTEKSDVYSFGVL 123
L ++T KSD+YSFGV+
Sbjct: 201 YMAPEALRGEITPKSDIYSFGVV 223
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 85.5 bits (210), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 23/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
++ +H +LV L+G + ++ LVY M G+L D L + PPL W R KI GAA
Sbjct: 78 MAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQGAA 137
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS-------RER------QLRLLGS-- 104
G+++LH N IHRD+KS NILLDE + AK S E+ R++G+
Sbjct: 138 NGINFLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTA 194
Query: 105 ----RILPAKLTEKSDVYSFGVL 123
L ++T KSD+YSFGV+
Sbjct: 195 YMAPEALRGEITPKSDIYSFGVV 217
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 82.0 bits (201), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 73/139 (52%), Gaps = 23/139 (16%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAARGLH 63
+H +LV L+G + ++ LVY G+L D L + PPL W R KI GAA G++
Sbjct: 79 QHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGIN 138
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENWVAK--------HSRERQLRLLGSRI--------- 106
+LH N IHRD+KS NILLDE + AK S + + SRI
Sbjct: 139 FLH---ENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAP 195
Query: 107 --LPAKLTEKSDVYSFGVL 123
L ++T KSD+YSFGV+
Sbjct: 196 EALRGEITPKSDIYSFGVV 214
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGAARGLH 63
HR+L+ L G + E +LVY MA G++ L +PPL W R +I +G+ARGL
Sbjct: 86 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 145
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------ILP- 108
YLH IIHRDVK+ NILLDE + A +L+ + I P
Sbjct: 146 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPE 205
Query: 109 ----AKLTEKSDVYSFGVL 123
K +EK+DV+ +GV+
Sbjct: 206 YLSTGKSSEKTDVFGYGVM 224
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 77.0 bits (188), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 71/139 (51%), Gaps = 21/139 (15%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGAARGLH 63
HR+L+ L G + E +LVY MA G++ L +PPL W R +I +G+ARGL
Sbjct: 94 HRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLA 153
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------ILP- 108
YLH IIHRDVK+ NILLDE + A +L+ + I P
Sbjct: 154 YLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTIGHIAPE 213
Query: 109 ----AKLTEKSDVYSFGVL 123
K +EK+DV+ +GV+
Sbjct: 214 YLSTGKSSEKTDVFGYGVM 232
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 58.9 bits (141), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 71/143 (49%), Gaps = 22/143 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY-NNHKPPLQWMWRLKICIGAA 59
+ LRH ++V +G + + +V + ++RG+L L+ + + L RL + A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 60 RGLHYLHTGTRNT-IIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLT------ 112
+G++YLH RN I+HRD+KS N+L+D+ + K RL S L +K
Sbjct: 148 KGMNYLHN--RNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEW 205
Query: 113 ------------EKSDVYSFGVL 123
EKSDVYSFGV+
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVI 228
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 58.9 bits (141), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKE-MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
++ LRH +LV L+G VE K + +V + MA+G+L D+L + + L LK +
Sbjct: 68 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 127
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR----ILPAKLTE-- 113
+ YL N +HRD+ + N+L+ E+ VAK S + S LP K T
Sbjct: 128 EAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPE 184
Query: 114 ---------KSDVYSFGVL 123
KSDV+SFG+L
Sbjct: 185 ALREKKFSTKSDVWSFGIL 203
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKE-MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
++ LRH +LV L+G VE K + +V + MA+G+L D+L + + L LK +
Sbjct: 59 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 118
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR----ILPAKLTE-- 113
+ YL N +HRD+ + N+L+ E+ VAK S + S LP K T
Sbjct: 119 EAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPE 175
Query: 114 ---------KSDVYSFGVL 123
KSDV+SFG+L
Sbjct: 176 ALREAAFSTKSDVWSFGIL 194
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKE-MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
++ LRH +LV L+G VE K + +V + MA+G+L D+L + + L LK +
Sbjct: 53 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 112
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR----ILPAKLTE-- 113
+ YL N +HRD+ + N+L+ E+ VAK S + S LP K T
Sbjct: 113 EAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPE 169
Query: 114 ---------KSDVYSFGVL 123
KSDV+SFG+L
Sbjct: 170 ALREKKFSTKSDVWSFGIL 188
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 58.5 bits (140), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 69/139 (49%), Gaps = 19/139 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKE-MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
++ LRH +LV L+G VE K + +V + MA+G+L D+L + + L LK +
Sbjct: 240 MTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVC 299
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR----ILPAKLTE-- 113
+ YL N +HRD+ + N+L+ E+ VAK S + S LP K T
Sbjct: 300 EAMEYLEG---NNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPE 356
Query: 114 ---------KSDVYSFGVL 123
KSDV+SFG+L
Sbjct: 357 ALREKKFSTKSDVWSFGIL 375
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 56.6 bits (135), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 71/143 (49%), Gaps = 22/143 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY-NNHKPPLQWMWRLKICIGAA 59
+ LRH ++V +G + + +V + ++RG+L L+ + + L RL + A
Sbjct: 88 MKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVA 147
Query: 60 RGLHYLHTGTRNT-IIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLT------ 112
+G++YLH RN I+HR++KS N+L+D+ + K RL S L +K
Sbjct: 148 KGMNYLHN--RNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEW 205
Query: 113 ------------EKSDVYSFGVL 123
EKSDVYSFGV+
Sbjct: 206 MAPEVLRDEPSNEKSDVYSFGVI 228
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 53.5 bits (127), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 62/141 (43%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV++ M G L D+L + L +C+ G+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 116
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL ++IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 117 AYLEEA---SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 172
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVL 193
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 52.8 bits (125), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV++ M G L D+L + L +C+ G+
Sbjct: 56 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 114
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL +IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 115 AYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 170
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 171 PEVFSFSRYSSKSDVWSFGVL 191
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 52.8 bits (125), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV++ M G L D+L + L +C+ G+
Sbjct: 58 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 116
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL +IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 117 AYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 172
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 173 PEVFSFSRYSSKSDVWSFGVL 193
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 52.4 bits (124), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV++ M G L D+L + L +C+ G+
Sbjct: 78 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 136
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL +IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 137 AYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 192
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 193 PEVFSFSRYSSKSDVWSFGVL 213
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 52.4 bits (124), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 61/141 (43%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV++ M G L D+L + L +C+ G+
Sbjct: 61 KLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 119
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL +IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 120 AYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 175
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 176 PEVFSFSRYSSKSDVWSFGVL 196
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H H+++LI + + M LV+D M +G L D+L K L I + +L
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYL--TEKVALSEKETRSIMRSLLEAVSFL 216
Query: 66 HTGTRNTIIHRDVKSTNILLDEN 88
H N I+HRD+K NILLD+N
Sbjct: 217 HA---NNIVHRDLKPENILLDDN 236
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 50.4 bits (119), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 56 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 114
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 115 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 171
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 172 APEAALYGRFTIKSDVWSFGIL 193
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 57 MKKLRHEKLVQLYAV-VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 116 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWT 172
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 173 APEAALYGRFTIKSDVWSFGIL 194
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 60/141 (42%), Gaps = 25/141 (17%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGL 62
L H LV L G +E + LV + M G L D+L + L +C+ G+
Sbjct: 59 KLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYL-RTQRGLFAAETLLGMCLDVCEGM 117
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK--- 110
YL +IHRD+ + N L+ EN V K S R + G++ P K
Sbjct: 118 AYLEEA---CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTK-FPVKWAS 173
Query: 111 --------LTEKSDVYSFGVL 123
+ KSDV+SFGVL
Sbjct: 174 PEVFSFSRYSSKSDVWSFGVL 194
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 58 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 116
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 117 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 173
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 174 APEAALYGRFTIKSDVWSFGIL 195
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 60 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 118
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 119 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 175
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 176 APEAALYGRFTIKSDVWSFGIL 197
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ +RH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKIRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+ + NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 49.3 bits (116), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G L D L L+ + + A
Sbjct: 67 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIAS 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 126 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 182
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 183 APEAALYGRFTIKSDVWSFGIL 204
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 48.9 bits (115), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 316 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 374
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 375 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 431
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 432 APEAALYGRFTIKSDVWSFGIL 453
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M +G+L D L L+ + + A
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 179
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 180 APEAALYGRFTIKSDVWSFGIL 201
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 48.5 bits (114), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M +G+L D L L+ + + A
Sbjct: 64 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 123 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWT 179
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 180 APEAALYGRFTIKSDVWSFGIL 201
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 349 APEAALYGRFTIKSDVWSFGIL 370
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 48.1 bits (113), Expect = 1e-06, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 349 APEAALYGRFTIKSDVWSFGIL 370
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 47.8 bits (112), Expect = 2e-06, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 233 MKKLRHEKLVQLYAV-VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIAS 291
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 292 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWT 348
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 349 APEAALYGRFTIKSDVWSFGIL 370
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 68/154 (44%), Gaps = 34/154 (22%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGT----LRDH-----LYNNHKPP--LQWM 49
L+NL+H H+V G VE +I+V++ M G LR H L PP L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 50 WRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRE----RQLR 100
L I A G+ YL + +HRD+ + N L+ EN + K SR+ R
Sbjct: 129 QMLHIAQQIAAGMVYLAS---QHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYR 185
Query: 101 LLGSRILPA-----------KLTEKSDVYSFGVL 123
+ G +LP K T +SDV+S GV+
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVV 219
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 47.8 bits (112), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 130
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR----- 105
+ YL + +HRD+ + N L+++ V K S + + +GS+
Sbjct: 131 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRW 187
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVL 210
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 47.4 bits (111), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/142 (28%), Positives = 66/142 (46%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ LRH LV L V + + +V + M++G+L D L L+ + + A
Sbjct: 234 MKKLRHEKLVQLYAV-VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIAS 292
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R +HRD+++ NIL+ EN V K + RL+ G++
Sbjct: 293 GMAYVE---RMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWT 349
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 350 APEAALYGRFTIKSDVWSFGIL 371
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 47.4 bits (111), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 29/148 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-LQWMWRLKICIGAA 59
+ L+H ++++L G ++ + LV + G L L PP + W ++I A
Sbjct: 60 FAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNWAVQI----A 115
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNIL---------------------LDENW--VAKHSRE 96
RG++YLH IIHRD+KS+NIL L W K S
Sbjct: 116 RGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAA 175
Query: 97 RQLRLLGSRILPAKLTEK-SDVYSFGVL 123
+ ++ A + K SDV+S+GVL
Sbjct: 176 GAYAWMAPEVIRASMFSKGSDVWSYGVL 203
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 47.0 bits (110), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 152 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 88 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 147
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 148 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 204
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 205 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 237
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 77 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 137 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 193
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 194 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 226
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 84 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 144 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 200
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 201 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 233
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 152 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 133 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 193 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 249
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 250 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 282
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 65/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ NL H LV L G + + + ++ + MA G L ++L + Q L++C
Sbjct: 53 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL-REMRHRFQTQQLLEMCKDVCE 111
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR------ 105
+ YL + +HRD+ + N L+++ V K S + +GS+
Sbjct: 112 AMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWS 168
Query: 106 ----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 169 PPEVLMYSKFSSKSDIWAFGVL 190
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 91 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 150
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 151 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 207
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 208 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 240
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 81 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 141 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 197
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 198 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 230
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 152 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 208
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 209 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 241
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 86 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 145
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 146 LVSCTYQLARGMEYLAS---QKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKK 202
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 203 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 235
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 57 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 114
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR----- 105
+ YL + +HRD+ + N L+++ V K S + +GS+
Sbjct: 115 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 171
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 172 SPPEVLMYSKFSSKSDIWAFGVL 194
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 145 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 204
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 205 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 261
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 262 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 294
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 46.6 bits (109), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 85 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
+ ARG+ YL + IHRD+ + N+L+ E+ V K + +
Sbjct: 145 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKK 201
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 202 TTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVL 234
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 130
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR----- 105
+ YL + +HRD+ + N L+++ V K S + +GS+
Sbjct: 131 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 187
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 188 SPPEVLMYSKFSSKSDIWAFGVL 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 121
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR----- 105
+ YL + +HRD+ + N L+++ V K S + +GS+
Sbjct: 122 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 178
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 179 SPPEVLMYSKFSSKSDIWAFGVL 201
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 46.2 bits (108), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 115
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSR----- 105
+ YL + +HRD+ + N L+++ V K S + +GS+
Sbjct: 116 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRW 172
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVL 195
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 46.2 bits (108), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+S L H+HLV G V E ILV + + G+L +L N K + +W+L++ A
Sbjct: 66 MSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAA 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL 85
+H+L NT+IH +V + NILL
Sbjct: 125 AMHFLE---ENTLIHGNVCAKNILL 146
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 67/143 (46%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAA 59
+ NL H LV L G + + + ++ + MA G L ++L H+ Q + L++C
Sbjct: 58 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQL--LEMCKDVC 115
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSR----- 105
+ YL + +HRD+ + N L+++ V K S R + GS+
Sbjct: 116 EAMEYLES---KQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRW 172
Query: 106 -----ILPAKLTEKSDVYSFGVL 123
++ +K + KSD+++FGVL
Sbjct: 173 SPPEVLMYSKFSSKSDIWAFGVL 195
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKN 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L LRH + + G ++ LV + C+ G+ D L HK PLQ + + GA
Sbjct: 108 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL--GSASD-LLEVHKKPLQEVEIAAVTHGAL 164
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
+GL YLH+ + +IHRDVK+ NILL E + K
Sbjct: 165 QGLAYLHS---HNMIHRDVKAGNILLSEPGLVK 194
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 23/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H LV L V + + +V + M +G+L D L + L+ + + A
Sbjct: 58 MKKLKHDKLVQLYAV-VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAA 116
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRI----- 106
G+ Y+ R IHRD++S NIL+ + K + RL+ G++
Sbjct: 117 GMAYIE---RMNYIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWT 173
Query: 107 -----LPAKLTEKSDVYSFGVL 123
L + T KSDV+SFG+L
Sbjct: 174 APEAALYGRFTIKSDVWSFGIL 195
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.4 bits (106), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 69/153 (45%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V + + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H++++ L+G ++ + ++ + ++G LR++L P +++ + +
Sbjct: 99 KHKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ ++G LR++L P +++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K + +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 50/93 (53%), Gaps = 7/93 (7%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L LRH + + G ++ LV + C+ G+ D L HK PLQ + + GA
Sbjct: 69 LQKLRHPNTIQYRGCYLREHTAWLVMEYCL--GSASD-LLEVHKKPLQEVEIAAVTHGAL 125
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
+GL YLH+ + +IHRDVK+ NILL E + K
Sbjct: 126 QGLAYLHS---HNMIHRDVKAGNILLSEPGLVK 155
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 39/154 (25%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H+++++L+G ++ + ++ + ++G LR++L P L++ +
Sbjct: 92 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK----------HSRERQLR 100
+ ARG+ YL + IHRD+ + N+L+ E+ V K H + +
Sbjct: 152 LVSCAYQVARGMEYLAS---KKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKK 208
Query: 101 LLGSRILPAK-----------LTEKSDVYSFGVL 123
R LP K T +SDV+SFGVL
Sbjct: 209 TTNGR-LPVKWMAPEALFDRIYTHQSDVWSFGVL 241
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 45.1 bits (105), Expect = 1e-05, Method: Composition-based stats.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 23/137 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMI-LVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIG 57
+ L+H LV L H V KE I ++ + MA+G+L D L ++ K PL + I
Sbjct: 231 MKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI- 287
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTE---- 113
A G+ ++ + IHRD+++ NIL+ + V K + + L +G++ P K T
Sbjct: 288 -AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIA-DFGLARVGAK-FPIKWTAPEAI 341
Query: 114 -------KSDVYSFGVL 123
KSDV+SFG+L
Sbjct: 342 NFGSFTIKSDVWSFGIL 358
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 65/143 (45%), Gaps = 24/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H LV L + + ++ + MA+G+L D L ++ + + A
Sbjct: 62 MKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 121
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ Y+ R IHRD+++ N+L+ E+ + K + R++ G++ P K
Sbjct: 122 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK-FPIKW 177
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 178 TAPEAINFGCFTIKSDVWSFGIL 200
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 69/145 (47%), Gaps = 26/145 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+SNL H ++V L G M++ + + G L L + P ++W +L++ + A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF--VPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 61 GLHYLHTGTRNTIIHRDVKSTNIL---LDENW-----VAKHSRERQ-----LRLLGSR-- 105
G+ Y+ I+HRD++S NI LDEN VA S +Q LLG+
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQQSVHSVSGLLGNFQW 192
Query: 106 ILPAKL-------TEKSDVYSFGVL 123
+ P + TEK+D YSF ++
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMI 217
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 70/146 (47%), Gaps = 31/146 (21%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMI-LVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIG 57
+ L+H LV L H V KE I ++ + MA+G+L D L ++ K PL + +
Sbjct: 64 MKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKL--IDFSAQ 119
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ ++ + IHRD+++ NIL+ + V K + R++ G++ P
Sbjct: 120 IAEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAK-FP 175
Query: 109 AK-----------LTEKSDVYSFGVL 123
K T KSDV+SFG+L
Sbjct: 176 IKWTAPEAINFGSFTIKSDVWSFGIL 201
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 6 HRHLVSLIGHHVE------NKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
HR++ + G ++ + ++ LV + G++ D + N L+ W IC
Sbjct: 80 HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREIL 139
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL +LH ++ +IHRD+K N+LL EN
Sbjct: 140 RGLSHLH---QHKVIHRDIKGQNVLLTEN 165
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 66/143 (46%), Gaps = 24/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H LV L + + + ++ + MA+G+L D L ++ + + A
Sbjct: 61 MKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAE 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ Y+ R IHRD+++ N+L+ E+ + K + R++ G++ P K
Sbjct: 121 GMAYIE---RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAK-FPIKW 176
Query: 111 ----------LTEKSDVYSFGVL 123
T KS+V+SFG+L
Sbjct: 177 TAPEAINFGCFTIKSNVWSFGIL 199
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 44.3 bits (103), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWT 177
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 209
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 38/157 (24%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP--------------PL 46
L+ L+H+H+V G E + +++V++ M G L L +H P PL
Sbjct: 97 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPL 155
Query: 47 QWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRE----R 97
L + A G+ YL +HRD+ + N L+ + V K SR+
Sbjct: 156 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 98 QLRLLGSRILPA-----------KLTEKSDVYSFGVL 123
R+ G +LP K T +SDV+SFGV+
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 249
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 68/145 (46%), Gaps = 26/145 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+SNL H ++V L G M++ + + G L L + P ++W +L++ + A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF--VPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 61 GLHYLHTGTRNTIIHRDVKSTNIL---LDENW-----VAKHSRERQ-----LRLLGSR-- 105
G+ Y+ I+HRD++S NI LDEN VA +Q LLG+
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQSVHSVSGLLGNFQW 192
Query: 106 ILPAKL-------TEKSDVYSFGVL 123
+ P + TEK+D YSF ++
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMI 217
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 38/157 (24%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP--------------PL 46
L+ L+H+H+V G E + +++V++ M G L L +H P PL
Sbjct: 68 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPL 126
Query: 47 QWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRE----R 97
L + A G+ YL +HRD+ + N L+ + V K SR+
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 98 QLRLLGSRILPA-----------KLTEKSDVYSFGVL 123
R+ G +LP K T +SDV+SFGV+
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 220
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 38/157 (24%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP--------------PL 46
L+ L+H+H+V G E + +++V++ M G L L +H P PL
Sbjct: 74 LTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFL-RSHGPDAKLLAGGEDVAPGPL 132
Query: 47 QWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRE----R 97
L + A G+ YL +HRD+ + N L+ + V K SR+
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 98 QLRLLGSRILPA-----------KLTEKSDVYSFGVL 123
R+ G +LP K T +SDV+SFGV+
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVV 226
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 4/85 (4%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+S L H+HLV G E ILV + + G+L +L N K + +W+L++ A
Sbjct: 66 MSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKN-KNCINILWKLEVAKQLAW 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL 85
+H+L NT+IH +V + NILL
Sbjct: 125 AMHFLE---ENTLIHGNVCAKNILL 146
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 43.5 bits (101), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRL------------ 52
+H+++++L+G ++ + ++ + ++G LR++L P ++ + +
Sbjct: 99 KHKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKD 158
Query: 53 --KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSR 95
ARG+ YL + IHRD+ + N+L+ EN V K +
Sbjct: 159 LVSCTYQLARGMEYLAS---QKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKK 215
Query: 96 ERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
RL + P L T +SDV+SFGVL
Sbjct: 216 TTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVL 248
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 43.5 bits (101), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 26/145 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+SNL H ++V L G M++ + + G L L + P ++W +L++ + A
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPRMVMEF--VPCGDLYHRLLDKAHP-IKWSVKLRLMLDIAL 133
Query: 61 GLHYLHTGTRNTIIHRDVKSTNIL---LDEN----------WVAKHSRERQLRLLGSR-- 105
G+ Y+ I+HRD++S NI LDEN +++ S LLG+
Sbjct: 134 GIEYMQN-QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQW 192
Query: 106 ILPAKL-------TEKSDVYSFGVL 123
+ P + TEK+D YSF ++
Sbjct: 193 MAPETIGAEEESYTEKADTYSFAMI 217
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 136 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 192
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 193 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 224
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 209
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 213
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 180
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 212
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 43.1 bits (100), Expect = 6e-05, Method: Composition-based stats.
Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 31/163 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L +L H +++ L + K LV + G L + + N HK I
Sbjct: 100 LKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHK--FDECDAANIMKQILS 157
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL------------DENWVAKHSRERQLR-------L 101
G+ YLH ++ I+HRD+K NILL D + S++ +LR
Sbjct: 158 GICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRLGTAYY 214
Query: 102 LGSRILPAKLTEKSDVYSFGV-----LCARPAMLPMAENEQEV 139
+ +L K EK DV+S GV LC P +N+Q++
Sbjct: 215 IAPEVLKKKYNEKCDVWSCGVIMYILLCGYPPF--GGQNDQDI 255
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 61 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 121 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 177
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 178 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 209
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 181
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 213
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + N ++ + + M GT + L + P+ K+ + + L+YL
Sbjct: 85 YIVQCFGTFITNTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYLKE 142
Query: 68 GTRNTIIHRDVKSTNILLDE 87
++ +IHRDVK +NILLDE
Sbjct: 143 --KHGVIHRDVKPSNILLDE 160
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.1 bits (100), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 125 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWT 181
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 182 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 213
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 124 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 180
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 181 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 212
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 184
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 123 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 179
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 180 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 211
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 42.7 bits (99), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 126
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 127 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 183
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 184 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 215
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L H LV+L + ++M +V D + G LR HL N + + +L IC
Sbjct: 69 MQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETV-KLFIC-ELVM 126
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE---------NWVAKHSRERQLRLLGSR---ILP 108
L YL IIHRD+K NILLDE N A RE Q+ + + P
Sbjct: 127 ALDYLQN---QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTKPYMAP 183
Query: 109 AKLTEKSDV-YSFGV 122
+ + YSF V
Sbjct: 184 EMFSSRKGAGYSFAV 198
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHRD+ + N L+ EN + K + RL+ A
Sbjct: 128 AMEYLE---KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWT 184
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 185 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 216
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 42.7 bits (99), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 24/153 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G +V + M G L D+L ++ + + L + +
Sbjct: 82 MKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISS 141
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAKL 111
+ YL + IHRD+ + N L+ EN V K + RL+ G++ P K
Sbjct: 142 AMEYLE---KKNFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK-FPIKW 197
Query: 112 TE-----------KSDVYSFGVLCARPAMLPMA 133
T KSDV++FGVL A M+
Sbjct: 198 TAPESLAYNTFSIKSDVWAFGVLLWEIATYGMS 230
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S L H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 102 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 42.4 bits (98), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 61/151 (40%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S L H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 88 ISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 148 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 66/158 (41%), Gaps = 39/158 (24%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP---------PLQWMWR 51
L+NL+H H+V G + +I+V++ M G L L H P P Q
Sbjct: 71 LTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFL-RAHGPDAMILVDGQPRQAKGE 129
Query: 52 LK------ICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRE---- 96
L I A G+ YL + +HRD+ + N L+ N + K SR+
Sbjct: 130 LGLSQMLHIASQIASGMVYLAS---QHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 97 RQLRLLGSRILPA-----------KLTEKSDVYSFGVL 123
R+ G +LP K T +SDV+SFGV+
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVI 224
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + RG + L K Q R I A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ---RTATYITELAN 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPE 181
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 182 MIEGRMHDEKVDLWSLGVLC 201
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 42.0 bits (97), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 58/151 (38%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL------------DENWVAKHSRERQLRLLG 103
A G YL N IHRD+ + N LL D R R G
Sbjct: 148 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQDIYRASYYRKGG 204
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + RG + L K Q R I A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQ---RTATYITELAN 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 182 MIEGRMHDEKVDLWSLGVLC 201
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 66/141 (46%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGA 58
LS + H ++ + G + +++ ++ D + G L L + + P+ + ++C+
Sbjct: 60 LSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLA- 118
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGS--RILP 108
L YLH+ II+RD+K NILLD+N AK+ + L G+ I P
Sbjct: 119 ---LEYLHS---KDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPDYIAP 172
Query: 109 AKLTEKS-----DVYSFGVLC 124
++ K D +SFG+L
Sbjct: 173 EVVSTKPYNKSIDWWSFGILI 193
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 62/140 (44%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ ++ + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KKVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 147 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.6 bits (96), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 29/145 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMI-LVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIG 57
+ L+H LV L H V KE I ++ + MA+G+L D L ++ K PL + I
Sbjct: 237 MKTLQHDKLVKL--HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQI- 293
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAK------- 110
A G+ ++ + IHRD+++ NIL+ + V K + R++ A+
Sbjct: 294 -AEGMAFIE---QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 349
Query: 111 ------------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 350 KWTAPEAINFGSFTIKSDVWSFGIL 374
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 87 ISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 146
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 147 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 203
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 204 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 234
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 104 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 163
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 164 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 220
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 221 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 251
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 141
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 142 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAK- 197
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVL 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 82 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 139
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 140 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 195
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 196 LPVKWMALESLQTQKFTTKSDVWSFGVL 223
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 142
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 143 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 198
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVL 226
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRILPA 109
G+ YL + +HRD+ + NIL++ N V K S R+L G +I P
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PI 185
Query: 110 -----------KLTEKSDVYSFGVL 123
K T SDV+S+G++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIV 210
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 103 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 160
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 161 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 216
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 217 LPVKWMALESLQTQKFTTKSDVWSFGVL 244
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 79 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 138
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 139 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 195
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 196 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 226
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 104 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 161
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 162 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 217
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 218 LPVKWMALESLQTQKFTTKSDVWSFGVL 245
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 77 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 134
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 135 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 190
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 191 LPVKWMALESLQTQKFTTKSDVWSFGVL 218
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 88 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 147
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 148 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 204
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 205 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 235
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 140
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 141 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 196
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVL 224
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 102 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 161
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 162 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 218
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 219 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 249
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 114 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 173
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 174 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 230
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 231 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 261
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 142
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 143 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 198
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVL 226
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 94 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 153
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 154 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGG 210
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 211 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 241
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 84 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 141
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 142 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 197
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 198 LPVKWMALESLQTQKFTTKSDVWSFGVL 225
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 71 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRILPA 109
G+ YL + +HRD+ + NIL++ N V K S R+L G +I P
Sbjct: 130 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PI 185
Query: 110 -----------KLTEKSDVYSFGVL 123
K T SDV+S+G++
Sbjct: 186 RWTSPEAIAYRKFTSASDVWSYGIV 210
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 64/145 (44%), Gaps = 27/145 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 88 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 146
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRILPA 109
G+ YL + +HRD+ + NIL++ N V K S R+L G +I P
Sbjct: 147 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKI-PI 202
Query: 110 -----------KLTEKSDVYSFGVL 123
K T SDV+S+G++
Sbjct: 203 RWTSPEAIAYRKFTSASDVWSYGIV 227
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 98 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 156
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 157 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 213
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 214 WTSPEAIAYRKFTSASDVWSYGIV 237
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 80 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 137
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ YL + +HRD+ + N +LDE + K + R + G++
Sbjct: 138 AKGMKYLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAK- 193
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 194 LPVKWMALESLQTQKFTTKSDVWSFGVL 221
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTELCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 128 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 187
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 188 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 244
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 245 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 275
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 60/151 (39%), Gaps = 31/151 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPP-----LQWMWRLKIC 55
+S H+++V IG +++ ++ + MA G L+ L P L + L +
Sbjct: 105 ISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA 164
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHS---------RERQLRLLG 103
A G YL N IHRD+ + N LL VAK R R G
Sbjct: 165 RDIACGCQYLE---ENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGG 221
Query: 104 SRILPAK-----------LTEKSDVYSFGVL 123
+LP K T K+D +SFGVL
Sbjct: 222 CAMLPVKWMPPEAFMEGIFTSKTDTWSFGVL 252
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L D H + + + G A
Sbjct: 100 MGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGIAS 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 216 WTSPEAIAYRKFTSASDVWSYGIV 239
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 68/168 (40%), Gaps = 44/168 (26%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H +++ IG ++K + + + + GTLR + + W R+ A G+
Sbjct: 64 LEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRG-IIKSMDSQYPWSQRVSFAKDIASGMA 122
Query: 64 YLHTGTRNTIIHRDVKSTNILLDEN-------------------------WVAKHSRERQ 98
YLH+ IIHRD+ S N L+ EN + K R+++
Sbjct: 123 YLHS---MNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKR 179
Query: 99 LRLLGSRILPA-------KLTEKSDVYSFG-VLC-------ARPAMLP 131
++G+ A EK DV+SFG VLC A P LP
Sbjct: 180 YTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLP 227
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGA 58
L+ + R +VSL ++ LV M G +R H+YN P Q +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL +LH + II+RD+K N+LLD++
Sbjct: 299 VSGLEHLH---QRNIIYRDLKPENVLLDDD 325
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGA 58
L+ + R +VSL ++ LV M G +R H+YN P Q +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL +LH + II+RD+K N+LLD++
Sbjct: 299 VSGLEHLH---QRNIIYRDLKPENVLLDDD 325
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGA 58
L+ + R +VSL ++ LV M G +R H+YN P Q +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL +LH + II+RD+K N+LLD++
Sbjct: 299 VSGLEHLH---QRNIIYRDLKPENVLLDDD 325
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.8 bits (94), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYN--NHKPPLQWMWRLKICIGA 58
L+ + R +VSL ++ LV M G +R H+YN P Q +
Sbjct: 239 LAKVHSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQI 298
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL +LH + II+RD+K N+LLD++
Sbjct: 299 VSGLEHLH---QRNIIYRDLKPENVLLDDD 325
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 60 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 116
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 117 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 173
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 174 MIEGRMHDEKVDLWSLGVLC 193
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI- 147
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---HSRERQL------RLLGSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + R G +LP
Sbjct: 148 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVV 229
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 79 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEI- 137
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 138 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 193
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 194 VRWMSPESLKDGVFTTYSDVWSFGVV 219
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 40.8 bits (94), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTXLCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 121
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 122 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRXXLCGTLDYLPPE 178
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 179 MIEGRMHDEKVDLWSLGVLC 198
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 145
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 146 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 202
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 203 MIEGRMHDEKVDLWSLGVLC 222
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 141
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 142 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 197
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVV 223
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 83 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 141
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 142 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 197
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 198 VRWMSPESLKDGVFTTYSDVWSFGVV 223
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 180
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 181 MIEGRMHDEKVDLWSLGVLC 200
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 74 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 132
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 133 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLP 188
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 189 VRWMSPESLKDGVFTTYSDVWSFGVV 214
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 62 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 118
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 119 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 175
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 176 MIEGRMHDEKVDLWSLGVLC 195
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 140
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 141 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVV 222
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 82 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 140
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 141 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 196
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVV 222
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 80 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 138
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 139 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 194
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 195 VRWMSPESLKDGVFTTYSDVWSFGVV 220
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 80 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 136
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 137 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 193
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 194 MIEGRMHDEKVDLWSLGVLC 213
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 182 MIEGRMHDEKVDLWSLGVLC 201
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRAALCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 144 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 201
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 202 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 257
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 258 LPVKWMALESLQTQKFTTKSDVWSFGVL 285
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 177
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 178 MIEGRMHDEKVDLWSLGVLC 197
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 134
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 135 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVV 216
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 64/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 89 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 147
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 148 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 203
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVV 229
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 309 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 368
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHR++ + N L+ EN + K + RL+ A
Sbjct: 369 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 425
Query: 110 --------KLTEKSDVYSFGVLCARPAMLPMA 133
K + KSDV++FGVL A M+
Sbjct: 426 APESLAYNKFSIKSDVWAFGVLLWEIATYGMS 457
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 40.4 bits (93), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 181
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 182 MIEGRMHDEKVDLWSLGVLC 201
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 14/102 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENK----EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICI 56
L ++H +++ IG ++ L+ +G+L D L N + W I
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKAN---VVSWNELCHIAE 128
Query: 57 GAARGLHYLH-------TGTRNTIIHRDVKSTNILLDENWVA 91
ARGL YLH G + I HRD+KS N+LL N A
Sbjct: 129 TMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTA 170
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 66/153 (43%), Gaps = 35/153 (22%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M ++ I
Sbjct: 111 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEI- 169
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N ++ E++ K R + G +LP
Sbjct: 170 -ADGMAYLNA---NKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 225
Query: 109 AK-----------LTEKSDVYSFGVLCARPAML 130
+ T SDV+SFGV+ A L
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 63 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 120 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPE 176
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 177 MIEGRMHDEKVDLWSLGVLC 196
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 142
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 143 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 198
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVL 226
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 143
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 144 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAK- 199
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVL 227
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 85 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 142
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 143 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 198
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 199 LPVKWMALESLQTQKFTTKSDVWSFGVL 226
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 83 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 140
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 141 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 196
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 197 LPVKWMALESLQTQKFTTKSDVWSFGVL 224
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 90 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 147
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 148 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 203
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 204 LPVKWMALESLQTQKFTTKSDVWSFGVL 231
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 70/148 (47%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENK-EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGA 58
+ + H +++SL+G + ++ ++V M G LR+ + N H P ++ + + +
Sbjct: 86 MKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL--IGFGLQV 143
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL------------GSRI 106
A+G+ +L + +HRD+ + N +LDE + K + R + G++
Sbjct: 144 AKGMKFLAS---KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAK- 199
Query: 107 LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 200 LPVKWMALESLQTQKFTTKSDVWSFGVL 227
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPE 177
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 178 MIEGRMHDEKVDLWSLGVLC 197
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 40.0 bits (92), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 34/149 (22%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C +L HL+ + + + + I AR
Sbjct: 62 LRKTRHVNILLFMGYSTKPQLAIVTQWCEG-SSLYHHLHAS-ETKFEMKKLIDIARQTAR 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN----------------WVAKHSRERQLRLLGS 104
G+ YLH +IIHRD+KS NI L E+ W H E +L GS
Sbjct: 120 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFE---QLSGS 173
Query: 105 RILPA----------KLTEKSDVYSFGVL 123
+ A + +SDVY+FG++
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIV 202
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 65/149 (43%), Gaps = 34/149 (22%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C +L HL+ + + + + I AR
Sbjct: 74 LRKTRHVNILLFMGYSTKPQLAIVTQWCEG-SSLYHHLHAS-ETKFEMKKLIDIARQTAR 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN----------------WVAKHSRERQLRLLGS 104
G+ YLH +IIHRD+KS NI L E+ W H E +L GS
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE---QLSGS 185
Query: 105 RILPA----------KLTEKSDVYSFGVL 123
+ A + +SDVY+FG++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G + K M+++ + M G L D + + + G A
Sbjct: 100 MGQFSHHNIIRLEGVISKYKPMMIITEYMENGAL-DKFLREKDGEFSVLQLVGMLRGIAA 158
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 159 GMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR 215
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+SFG++
Sbjct: 216 WTAPEAISYRKFTSASDVWSFGIV 239
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 64 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 121 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE 177
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 178 MIEGRMHDEKVDLWSLGVLC 197
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
++ ++V+ + ++ E+ +V + +A G+L D + Q + C+ A L +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEF 132
Query: 65 LHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLR--LLGSR--ILPAKL 111
LH+ N +IHRD+KS NILL D + A+ + E+ R ++G+ + P +
Sbjct: 133 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 189
Query: 112 TEKS-----DVYSFGVLC 124
T K+ D++S G++
Sbjct: 190 TRKAYGPKVDIWSLGIMA 207
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 39.7 bits (91), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
++ ++V+ + ++ E+ +V + +A G+L D + Q + C+ A L +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEF 131
Query: 65 LHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLR--LLGSR--ILPAKL 111
LH+ N +IHRD+KS NILL D + A+ + E+ R ++G+ + P +
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVV 188
Query: 112 TEKS-----DVYSFGVLC 124
T K+ D++S G++
Sbjct: 189 TRKAYGPKVDIWSLGIMA 206
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
++ ++V+ + ++ E+ +V + +A G+L D + Q + C+ A L +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEF 131
Query: 65 LHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLR--LLGSR--ILPAKL 111
LH+ N +IHRD+KS NILL D + A+ + E+ R ++G+ + P +
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVV 188
Query: 112 TEKS-----DVYSFGVLC 124
T K+ D++S G++
Sbjct: 189 TRKAYGPKVDIWSLGIMA 206
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L + Q R I A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ---RTATYITELAN 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN---------WVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL N W R+ L G+ LP +
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 180
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 181 MIEGRMHDEKVDLWSLGVLC 200
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 39.7 bits (91), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLY--------NNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 140 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 196
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 197 WMAPESLKDGVFTTSSDMWSFGVV 220
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 89 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 145
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 146 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 202
Query: 111 L------TEKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 203 MIEGRMHDEKVDLWSLGVLC 222
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
++ ++V+ + ++ E+ +V + +A G+L D + Q + C+ A L +
Sbjct: 75 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEF 131
Query: 65 LHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLR--LLGSR--ILPAKL 111
LH+ N +IHRD+KS NILL D + A+ + E+ R ++G+ + P +
Sbjct: 132 LHS---NQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 188
Query: 112 TEKS-----DVYSFGVLC 124
T K+ D++S G++
Sbjct: 189 TRKAYGPKVDIWSLGIMA 206
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 34/149 (22%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + I+ C +L HL+ + + + + I AR
Sbjct: 74 LRKTRHVNILLFMGYSTAPQLAIVTQWCEG-SSLYHHLHAS-ETKFEMKKLIDIARQTAR 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN----------------WVAKHSRERQLRLLGS 104
G+ YLH +IIHRD+KS NI L E+ W H E +L GS
Sbjct: 132 GMDYLHA---KSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFE---QLSGS 185
Query: 105 RILPA----------KLTEKSDVYSFGVL 123
+ A + +SDVY+FG++
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIV 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 55 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 109
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 110 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 145
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 93 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 147
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 148 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 183
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 54 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 108
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 109 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 144
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 60 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 114
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 115 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 150
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 57 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 111
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 112 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 147
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 4 LRHRHLVSLIGHHVENK------EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
LRH +++ I +NK ++ LV D G+L D+L N + ++ M +K+ +
Sbjct: 80 LRHENILGFIA--ADNKDNGTWTQLWLVSDYHEHGSLFDYL-NRYTVTVEGM--IKLALS 134
Query: 58 AARGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
A GL +LH T + I HRD+KS NIL+ +N
Sbjct: 135 TASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKN 170
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL--------YNNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 138 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 194
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 195 WMAPESLKDGVFTTSSDMWSFGVV 218
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL--------YNNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV 221
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLY--------NNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR 197
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV 221
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 65/143 (45%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L H LV G + + +V + ++ G L ++L +H L+ L++C
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL-RSHGKGLEPSQLLEMCYDVCE 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSR---------ERQLRLLGSRILPAK- 110
G+ +L + + IHRD+ + N L+D + K S ++ + +G++ P K
Sbjct: 116 GMAFLES---HQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTK-FPVKW 171
Query: 111 ----------LTEKSDVYSFGVL 123
+ KSDV++FG+L
Sbjct: 172 SAPEVFHYFKYSSKSDVWAFGIL 194
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLY--------NNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV 221
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 39.3 bits (90), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL--------YNNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HRD+ + N ++ ++ K R + G +LP +
Sbjct: 141 DGMAYLNA---KKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR 197
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV 221
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 39.3 bits (90), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 68 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL D W R+ L G+ LP +
Sbjct: 125 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLDYLPPE 181
Query: 111 LT------EKSDVYSFGVLC 124
EK D++S GVLC
Sbjct: 182 XIEGRXHDEKVDLWSLGVLC 201
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.3 bits (90), Expect = 9e-04, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP-----PLQWMWRLKIC 55
+S LRH LV+L ++ EM+++Y+ M+ G L + + + H +++M ++C
Sbjct: 208 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM--RQVC 265
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTEKS 115
+GL ++H N +H D+K NI+ + K S E +L G L A L K
Sbjct: 266 ----KGLCHMH---ENNYVHLDLKPENIM----FTTKRSNELKLIDFG---LTAHLDPKQ 311
Query: 116 DV 117
V
Sbjct: 312 SV 313
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 39.3 bits (90), Expect = 9e-04, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L L H +++ L + + LV +C G L D + H+ + I
Sbjct: 90 LKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEII--HRMKFNEVDAAVIIKQVLS 147
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE--------------NWVAKHSRERQLRL----- 101
G+ YLH ++ I+HRD+K N+LL+ + V ++ ++ + RL
Sbjct: 148 GVTYLH---KHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYY 204
Query: 102 LGSRILPAKLTEKSDVYSFGVL 123
+ +L K EK DV+S GV+
Sbjct: 205 IAPEVLRKKYDEKCDVWSIGVI 226
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 63/146 (43%), Gaps = 35/146 (23%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL-------YNN---HKPPLQWMWRLKICIG 57
H+V L+G + + +++ + M RG L+ +L NN P L M +++
Sbjct: 76 HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM--IQMAGE 133
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILP 108
A G+ YL+ N +HRD+ + N + E++ K R + G +LP
Sbjct: 134 IADGMAYLNA---NKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLP 190
Query: 109 AK-----------LTEKSDVYSFGVL 123
+ T SDV+SFGV+
Sbjct: 191 VRWMSPESLKDGVFTTYSDVWSFGVV 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 66 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE---------NWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL W R+ L G+ LP +
Sbjct: 123 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 179
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 180 MIEGRMHDEKVDLWSLGVLC 199
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.001, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 270 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISS 329
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHR++ + N L+ EN + K + RL+ A
Sbjct: 330 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 386
Query: 110 --------KLTEKSDVYSFGVL 123
K + KSDV++FGVL
Sbjct: 387 APESLAYNKFSIKSDVWAFGVL 408
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 38.9 bits (89), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 96 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 154
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 155 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 211
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 212 IFWYAPESLTESKFSVASDVWSFGVV 237
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 60/144 (41%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H ++V L G K +++V + M G L D H + + + G A
Sbjct: 98 MGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGAL-DAFLRKHDGQFTVIQLVGMLRGIAA 156
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL +HRD+ + NIL++ N V K S R++ G +I
Sbjct: 157 GMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVR 213
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 214 WTAPEAIQYRKFTSASDVWSYGIV 237
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ ++H +LV L+G ++ + M G L D+L ++ + + L + +
Sbjct: 267 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISS 326
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPA----------- 109
+ YL + IHR++ + N L+ EN + K + RL+ A
Sbjct: 327 AMEYLE---KKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWT 383
Query: 110 --------KLTEKSDVYSFGVL 123
K + KSDV++FGVL
Sbjct: 384 APESLAYNKFSIKSDVWAFGVL 405
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 61/140 (43%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L + Q R I A
Sbjct: 67 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQ---RTATYITELAN 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN---------WVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL N W R+ L G+ LP +
Sbjct: 124 ALSYCHS---KRVIHRDIKPENLLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPE 180
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 181 MIEGRMHDEKVDLWSLGVLC 200
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 70 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 128
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 129 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 185
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 186 IFWYAPESLTESKFSVASDVWSFGVV 211
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 72 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 130
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 131 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 187
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 188 IFWYAPESLTESKFSVASDVWSFGVV 213
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVV 209
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 71 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 129
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 130 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 186
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 187 IFWYAPESLTESKFSVASDVWSFGVV 212
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 63 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 121
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 122 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 178
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 179 IFWYAPESLTESKFSVASDVWSFGVV 204
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 69 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 127
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 128 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 184
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 185 IFWYAPESLTESKFSVASDVWSFGVV 210
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 47/114 (41%), Gaps = 25/114 (21%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL---------------------- 38
++ + ++V L+G K M L+++ MA G L + L
Sbjct: 104 MAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARV 163
Query: 39 YNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
+ PPL +L I A G+ YL + +HRD+ + N L+ EN V K
Sbjct: 164 SSPGPPPLSCAEQLCIARQVAAGMAYL---SERKFVHRDLATRNCLVGENMVVK 214
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 60/140 (42%), Gaps = 23/140 (16%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA-AR 60
S+LRH +++ L G+ + + L+ + GT+ L K Q R I A
Sbjct: 65 SHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQ---RTATYITELAN 121
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE---------NWVAKHSRERQLRLLGS-RILPAK 110
L Y H+ +IHRD+K N+LL W R+ L G+ LP +
Sbjct: 122 ALSYCHS---KRVIHRDIKPENLLLGSAGELKIANFGWSVHAPSSRRTTLCGTLDYLPPE 178
Query: 111 LT------EKSDVYSFGVLC 124
+ EK D++S GVLC
Sbjct: 179 MIEGRMHDEKVDLWSLGVLC 198
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVV 206
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 64 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 122
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 123 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 179
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 180 IFWYAPESLTESKFSVASDVWSFGVV 205
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 127 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 184
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 185 --KHKIMHRDVKPSNILVN 201
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 180
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVV 206
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 92 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 149
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 150 --KHKIMHRDVKPSNILVN 166
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 38.5 bits (88), Expect = 0.001, Method: Composition-based stats.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 21/122 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP-----PLQWMWRLKIC 55
+S LRH LV+L ++ EM+++Y+ M+ G L + + + H +++M ++C
Sbjct: 102 MSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYM--RQVC 159
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTEKS 115
+GL ++H N +H D+K NI+ + K S E +L G L A L K
Sbjct: 160 ----KGLCHMH---ENNYVHLDLKPENIM----FTTKRSNELKLIDFG---LTAHLDPKQ 205
Query: 116 DV 117
V
Sbjct: 206 SV 207
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G + ++V + M G+L D H M + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRILPA 109
G+ YL + +HRD+ + N+L+D N V K S R+L G +I P
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI-PI 218
Query: 110 K-----------LTEKSDVYSFGVL 123
+ + SDV+SFGV+
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVV 243
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 60/145 (41%), Gaps = 27/145 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G + ++V + M G+L D H M + + G
Sbjct: 104 MGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSL-DTFLRTHDGQFTIMQLVGMLRGVGA 162
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRILPA 109
G+ YL + +HRD+ + N+L+D N V K S R+L G +I P
Sbjct: 163 GMRYL---SDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI-PI 218
Query: 110 K-----------LTEKSDVYSFGVL 123
+ + SDV+SFGV+
Sbjct: 219 RWTAPEAIAFRTFSSASDVWSFGVV 243
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 141
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 142 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVV 224
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 83 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 141
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 142 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 198
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 199 IFWYAPESLTESKFSVASDVWSFGVV 224
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 5/92 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ ++ I+ C +L HL+ + Q + I A+
Sbjct: 86 LRKTRHVNILLFMGYMTKDNLAIVTQWCEG-SSLYKHLHV-QETKFQMFQLIDIARQTAQ 143
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
G+ YLH IIHRD+KS NI L E K
Sbjct: 144 GMDYLHA---KNIIHRDMKSNNIFLHEGLTVK 172
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 84 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 141
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 142 --KHKIMHRDVKPSNILVN 158
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 46/89 (51%), Gaps = 8/89 (8%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP-PLQWMWRLKICIGAA 59
LS ++ G ++++ ++ ++ + + G+ D L KP PL+ + I
Sbjct: 71 LSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL----KPGPLEETYIATILREIL 126
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+GL YLH+ + IHRD+K+ N+LL E
Sbjct: 127 KGLDYLHSERK---IHRDIKAANVLLSEQ 152
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P + + K+ I RGL YL
Sbjct: 75 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKRIPEEILG--KVSIAVLRGLAYLRE 132
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 133 --KHQIMHRDVKPSNILVN 149
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 4 LRHRHLVSLIGHHVENK----EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
+RH +++ I ++ ++ L+ D G+L D+L + L LK+ +
Sbjct: 88 MRHENILGFIAADIKGTGSWTQLYLITDYHENGSLYDYLKSTT---LDAKSMLKLAYSSV 144
Query: 60 RGLHYLHTGTRNT-----IIHRDVKSTNILLDEN 88
GL +LHT +T I HRD+KS NIL+ +N
Sbjct: 145 SGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKN 178
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 52 LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-------HSRERQLRLLGS 104
L ARG+ YL ++ IHRD+ + NIL+ EN+VAK +E ++
Sbjct: 135 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 191
Query: 105 RILPAK-----------LTEKSDVYSFGVL 123
R LP + T SDV+S+GVL
Sbjct: 192 R-LPVRWMAIESLNYSVYTTNSDVWSYGVL 220
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 52 LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-------HSRERQLRLLGS 104
L ARG+ YL ++ IHRD+ + NIL+ EN+VAK +E ++
Sbjct: 145 LHFAADVARGMDYL---SQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 201
Query: 105 RILPAK-----------LTEKSDVYSFGVL 123
R LP + T SDV+S+GVL
Sbjct: 202 R-LPVRWMAIESLNYSVYTTNSDVWSYGVL 230
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 122
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 123 --KHKIMHRDVKPSNILVN 139
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 68 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 125
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 126 --KHKIMHRDVKPSNILVN 142
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 38.1 bits (87), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 122
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 123 --KHKIMHRDVKPSNILVN 139
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 122
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 123 --KHKIMHRDVKPSNILVN 139
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 122
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 123 --KHKIMHRDVKPSNILVN 139
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
++V G + E+ + + M G+L L + P Q + K+ I +GL YL
Sbjct: 65 YIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGRIPEQILG--KVSIAVIKGLTYLRE 122
Query: 68 GTRNTIIHRDVKSTNILLD 86
++ I+HRDVK +NIL++
Sbjct: 123 --KHKIMHRDVKPSNILVN 139
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 64/144 (44%), Gaps = 25/144 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++K +++V + M G+L L N + + + G +
Sbjct: 77 MGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ-FTVIQLVGMLRGISA 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI--- 106
G+ YL + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 136 GMKYL---SDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR 192
Query: 107 --LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 193 WTAPEAIAFRKFTSASDVWSYGIV 216
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 77 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 134
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 135 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 188
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 189 APEVLSKKGHSFEVDVWSIGCI 210
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 130
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 131 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCI 206
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 73 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 130
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 131 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPNYI 184
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 185 APEVLSKKGHSFEVDVWSIGCI 206
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 69/138 (50%), Gaps = 24/138 (17%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
++ ++V+ + ++ E+ +V + +A G+L D + Q + C+ A L +
Sbjct: 76 KNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQA---LEF 132
Query: 65 LHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLR--LLGSR--ILPAKL 111
LH+ N +IHR++KS NILL D + A+ + E+ R ++G+ + P +
Sbjct: 133 LHS---NQVIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVV 189
Query: 112 TEKS-----DVYSFGVLC 124
T K+ D++S G++
Sbjct: 190 TRKAYGPKVDIWSLGIMA 207
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 172
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 60 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 117
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 118 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 174
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 175 MAPEVIRMQDKNPYSFQSDVYAFGIV 200
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 121 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIV 203
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 58 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 65 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD--------------------ENWVAKHSRERQ 98
+G+ YL T IHRD+ + NIL++ E + K E
Sbjct: 124 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP 180
Query: 99 LRLLGSRILP-AKLTEKSDVYSFGVL 123
+ L +K + SDV+SFGV+
Sbjct: 181 IFWYAPESLTESKFSVASDVWSFGVV 206
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H +++ L + N LV+D M +G L D+L K L KI + L
Sbjct: 70 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 127
Query: 66 HTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K NILLD++
Sbjct: 128 H---KLNIVHRDLKPENILLDDD 147
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 63 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 121 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 177
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 178 MAPEVIRMQDKNPYSFQSDVYAFGIV 203
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGA 58
+ H +++ L G + K ++++ + M G+L L N +Q + L+ G
Sbjct: 84 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GI 140
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI- 106
G+ YL + + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 141 GSGMKYL---SDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 197
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 198 IRWTAPEAIAYRKFTSASDVWSYGIV 223
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 57 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 116 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 171
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 172 TAPEAINYGTFTIKSDVWSFGIL 194
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 37.4 bits (85), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL--------YNNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HR++ + N ++ ++ K R + G +LP +
Sbjct: 142 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 198
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 199 WMAPESLKDGVFTTSSDMWSFGVV 222
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 95 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 152
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 153 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 206
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 207 APEVLSKKGHSFEVDVWSIGCI 228
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 71 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 128
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 129 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 182
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 183 APEVLSKKGHSFEVDVWSIGCI 204
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 144 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 200
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIV 226
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 86 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 143
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 144 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 200
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 201 MAPEVIRMQDKNPYSFQSDVYAFGIV 226
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHL--------YNNHKPPLQWMWRLKICIGAA 59
H+V L+G + + ++V + MA G L+ +L N +PP +++ A
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK 110
G+ YL+ +HR++ + N ++ ++ K R + G +LP +
Sbjct: 141 DGMAYLNA---KKFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR 197
Query: 111 -----------LTEKSDVYSFGVL 123
T SD++SFGV+
Sbjct: 198 WMAPESLKDGVFTTSSDMWSFGVV 221
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 78 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 136 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILW 192
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 193 MAPEVIRMQDKNPYSFQSDVYAFGIV 218
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 65/142 (45%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L H+H+V G +N + +V + C R L H +P ++ R +I +G
Sbjct: 97 SLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLR-QIVLGC- 154
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
YLH RN +IHRD+K N+ L+E+ K + ER+ L G+ I
Sbjct: 155 ---QYLH---RNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYI 208
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L++K DV+S G +
Sbjct: 209 APEVLSKKGHSFEVDVWSIGCI 230
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGA 58
+ H +++ L G + K ++++ + M G+L L N +Q + L+ G
Sbjct: 63 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GI 119
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI- 106
G+ YL + + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 120 GSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 176
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 177 IRWTAPEAIAYRKFTSASDVWSYGIV 202
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + + I+ C G+ H + + + + + I A+
Sbjct: 85 LRKTRHVNILLFMGYSTKPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 142
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 143 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 199
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 200 MAPEVIRMQDKNPYSFQSDVYAFGIV 225
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H +++ L + N LV+D M +G L D+L K L KI + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 66 HTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K NILLD++
Sbjct: 141 H---KLNIVHRDLKPENILLDDD 160
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 65/146 (44%), Gaps = 29/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGA 58
+ H +++ L G + K ++++ + M G+L L N +Q + L+ G
Sbjct: 69 MGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLR---GI 125
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL-----------GSRI- 106
G+ YL + + +HRD+ + NIL++ N V K S R+L G +I
Sbjct: 126 GSGMKYL---SDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIP 182
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 183 IRWTAPEAIAYRKFTSASDVWSYGIV 208
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 5/83 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H +++ L + N LV+D M +G L D+L K L KI + L
Sbjct: 83 HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL--TEKVTLSEKETRKIMRALLEVICAL 140
Query: 66 HTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K NILLD++
Sbjct: 141 H---KLNIVHRDLKPENILLDDD 160
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LR++L HK + + L+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYL-QKHKERIDHIKLLQYTSQI 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVV 209
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 62 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 121 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAK-FPIKW 176
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGIL 199
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 62/146 (42%), Gaps = 28/146 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH +++ +G+ + I+ C G+ H + + + + + I A+
Sbjct: 58 LRKTRHVNILLFMGYSTAPQLAIVTQWC--EGSSLYHHLHIIETKFEMIKLIDIARQTAQ 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------------HSRERQLRLLGSRIL- 107
G+ YLH +IIHRD+KS NI L E+ K S Q L IL
Sbjct: 116 GMDYLHA---KSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILW 172
Query: 108 --PAKL--------TEKSDVYSFGVL 123
P + + +SDVY+FG++
Sbjct: 173 MAPEVIRMQDKNPYSFQSDVYAFGIV 198
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRD-HLYNNHKPPLQWMWRLKICIGAA 59
L LRH +LV+L+ + K LV++ + L D L+ N L + K
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG---LDYQVVQKYLFQII 134
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
G+ + H+ + IIHRD+K NIL+ ++ V K
Sbjct: 135 NGIGFCHS---HNIIHRDIKPENILVSQSGVVK 164
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 68 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 127 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 182
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGIL 205
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 71 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 130 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 185
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 186 TAPEAINYGTFTIKSDVWSFGIL 208
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 37.0 bits (84), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 67 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 126 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 181
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 182 TAPEAINYGTFTIKSDVWSFGIL 204
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMW-RLKICIGAA 59
LS + H ++V L G + + LV + G+L + L+ P + C+ +
Sbjct: 56 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 113
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
+G+ YLH+ +IHRD+K N+LL
Sbjct: 114 QGVAYLHSMQPKALIHRDLKPPNLLL 139
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 68 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 126
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 127 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 182
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 183 TAPEAINYGTFTIKSDVWSFGIL 205
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 48/102 (47%), Gaps = 17/102 (16%)
Query: 3 NLRHRHLVSLI-----GHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIG 57
++H +L+ I G ++E E+ L+ +G+L D+L N + W +
Sbjct: 65 GMKHENLLQFIAAEKRGSNLE-VELWLITAFHDKGSLTDYLKGNI---ITWNELCHVAET 120
Query: 58 AARGLHYLHT--------GTRNTIIHRDVKSTNILLDENWVA 91
+RGL YLH G + +I HRD KS N+LL + A
Sbjct: 121 MSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTA 162
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 72 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 131 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 186
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 187 TAPEAINYGTFTIKSDVWSFGIL 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 63 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 121
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 122 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 177
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 178 TAPEAINYGTFTIKSDVWSFGIL 200
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 62 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 121 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 176
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGIL 199
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 62 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 121 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 176
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGIL 199
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 70 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 129 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 184
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 185 TAPEAINYGTFTIKSDVWSFGIL 207
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 64 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 123 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 178
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 179 TAPEAINYGTFTIKSDVWSFGIL 201
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 62 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 120
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHRD+++ NIL+ + K + RL+ G++ P K
Sbjct: 121 GMAFIEE--RN-YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAK-FPIKW 176
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 177 TAPEAINYGTFTIKSDVWSFGIL 199
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMW-RLKICIGAA 59
LS + H ++V L G + + LV + G+L + L+ P + C+ +
Sbjct: 55 LSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCS 112
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
+G+ YLH+ +IHRD+K N+LL
Sbjct: 113 QGVAYLHSMQPKALIHRDLKPPNLLL 138
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L H ++V LIG + + + +V + + G L L+ L++ AA
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAA 224
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRERQLRLL----GSRILPAKL 111
G+ YL + IHRD+ + N L+ E V K SRE + G R +P K
Sbjct: 225 GMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKW 281
Query: 112 T-----------EKSDVYSFGVL 123
T +SDV+SFG+L
Sbjct: 282 TAPEALNYGRYSSESDVWSFGIL 304
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARG 61
S+LRH +++ + + + K + L+ + RG L L + + A
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADA 126
Query: 62 LHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAKL 111
LHY H +IHRD+K N+L+ D W R+ + G+ LP ++
Sbjct: 127 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 112 T------EKSDVYSFGVLC 124
EK D++ GVLC
Sbjct: 184 IEGKTHDEKVDLWCAGVLC 202
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 24/143 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L H ++V LIG + + + +V + + G L L+ L++ AA
Sbjct: 166 LKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFL-RTEGARLRVKTLLQMVGDAAA 224
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----HSRERQLRLL----GSRILPAKL 111
G+ YL + IHRD+ + N L+ E V K SRE + G R +P K
Sbjct: 225 GMEYLES---KCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKW 281
Query: 112 T-----------EKSDVYSFGVL 123
T +SDV+SFG+L
Sbjct: 282 TAPEALNYGRYSSESDVWSFGIL 304
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARG 61
S+LRH +++ + + + K + L+ + RG L L + + A
Sbjct: 69 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADA 126
Query: 62 LHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAKL 111
LHY H +IHRD+K N+L+ D W R+ + G+ LP ++
Sbjct: 127 LHYCHE---RKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM 183
Query: 112 T------EKSDVYSFGVLC 124
EK D++ GVLC
Sbjct: 184 IEGKTHDEKVDLWCAGVLC 202
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 36.6 bits (83), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 58/139 (41%), Gaps = 21/139 (15%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARG 61
S+LRH +++ + + + K + L+ + RG L L + + A
Sbjct: 70 SHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGR--FDEQRSATFMEELADA 127
Query: 62 LHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRERQLRLLGS-RILPAKL 111
LHY H +IHRD+K N+L+ D W R+ + G+ LP ++
Sbjct: 128 LHYCH---ERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEM 184
Query: 112 T------EKSDVYSFGVLC 124
EK D++ GVLC
Sbjct: 185 IEGKTHDEKVDLWCAGVLC 203
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 20/82 (24%)
Query: 12 LIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLH----- 66
LI H+ E+ + YD + R TL HL L++ + AA GL +LH
Sbjct: 83 LITHYHEHGSL---YDFLQRQTLEPHL------------ALRLAVSAACGLAHLHVEIFG 127
Query: 67 TGTRNTIIHRDVKSTNILLDEN 88
T + I HRD KS N+L+ N
Sbjct: 128 TQGKPAIAHRDFKSRNVLVKSN 149
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
LS ++ G +++ ++ ++ + + G+ D L Q LK + +
Sbjct: 75 LSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL---K 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL YLH+ + IHRD+K+ N+LL E
Sbjct: 132 GLDYLHSEKK---IHRDIKAANVLLSEQ 156
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H ++V + ++ E+ +V + + G L D + + Q +C+ R L YL
Sbjct: 101 HDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---TVCLSVLRALSYL 157
Query: 66 HTGTRNTIIHRDVKSTNILLDENWVAKHS 94
H +IHRD+KS +ILL + K S
Sbjct: 158 HN---QGVIHRDIKSDSILLTSDGRIKLS 183
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 36.2 bits (82), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 52 LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-------HSRERQLRLLGS 104
L ARG+ YL ++ IHR++ + NIL+ EN+VAK +E ++
Sbjct: 142 LHFAADVARGMDYL---SQKQFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMG 198
Query: 105 RILPAK-----------LTEKSDVYSFGVL 123
R LP + T SDV+S+GVL
Sbjct: 199 R-LPVRWMAIESLNYSVYTTNSDVWSYGVL 227
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 45/102 (44%), Gaps = 23/102 (22%)
Query: 42 HKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK--------- 92
+K P+ + ARG+ +L + IHRD+ + NILL EN V K
Sbjct: 192 YKEPITMEDLISYSFQVARGMEFLSS---RKCIHRDLAARNILLSENNVVKICDFGLARD 248
Query: 93 ------HSRERQLRLLGSRILPAKL-----TEKSDVYSFGVL 123
+ R+ RL + P + + KSDV+S+GVL
Sbjct: 249 IYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVL 290
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L H + + L+
Sbjct: 68 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QAHAERIDHIKLLQYTSQI 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD-ENWV-----------AKHSRERQLRLLGSRI 106
+G+ YL T IHRD+ + NIL++ EN V + +++ G
Sbjct: 127 CKGMEYLGT---KRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESP 183
Query: 107 L----PAKLTEK-----SDVYSFGVL 123
+ P LTE SDV+SFGV+
Sbjct: 184 IFWYAPESLTESKFSVASDVWSFGVV 209
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 5/89 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
RH H++ L ++ +V + ++ G L D++ N + + RL I + G+
Sbjct: 73 FRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILS--GVD 130
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENWVAK 92
Y H R+ ++HRD+K N+LLD + AK
Sbjct: 131 YCH---RHMVVHRDLKPENVLLDAHMNAK 156
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 35.8 bits (81), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 25/94 (26%)
Query: 52 LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRI----- 106
+ + ARG+ YL +HRD+ + N +LDE++ K + R + R
Sbjct: 127 ISFGLQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQ 183
Query: 107 ------LPAK-----------LTEKSDVYSFGVL 123
LP K T KSDV+SFGVL
Sbjct: 184 QHRHARLPVKWTALESLQTYRFTTKSDVWSFGVL 217
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ H HLV L+G + + + LV M G L ++++ HK + L C+ A+
Sbjct: 94 MASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAK 151
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL----------GSRILPAK 110
G+ YL ++HRD+ + N+L+ K + RLL G + +P K
Sbjct: 152 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK-MPIK 207
Query: 111 -----------LTEKSDVYSFGV 122
T +SDV+S+GV
Sbjct: 208 WMALECIHYRKFTHQSDVWSYGV 230
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 61/146 (41%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G ++ ++++ + M G+L L N + + + G A
Sbjct: 88 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ-FTVIQLVGMLRGIAA 146
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL-------------LGSRI- 106
G+ YL +HRD+ + NIL++ N V K S R LG +I
Sbjct: 147 GMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIP 203
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SDV+S+G++
Sbjct: 204 IRWTAPEAIQYRKFTSASDVWSYGIV 229
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/153 (20%), Positives = 62/153 (40%), Gaps = 37/153 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR------------- 51
+H ++V+L+G ++++ + G L + L P L++ +
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRD 167
Query: 52 -LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVA 91
L A+G+ +L + IHRDV + N+LL D N++
Sbjct: 168 LLHFSSQVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIV 224
Query: 92 KHSRERQLRLLGSR-ILPAKLTEKSDVYSFGVL 123
K + ++ + I T +SDV+S+G+L
Sbjct: 225 KGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 257
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 132
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 133 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 189
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 190 MALESILHRIYTHQSDVWSYGV 211
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 64/146 (43%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L +L+H ++V G + + + L+ + + G+LRD+L HK + + L+
Sbjct: 66 LKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYL-QKHKERIDHIKLLQYTSQI 124
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD--------------------ENWVAKHSRERQ 98
+G+ YL T IHR++ + NIL++ E + K E
Sbjct: 125 CKGMEYLGT---KRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP 181
Query: 99 LRLLGSRILP-AKLTEKSDVYSFGVL 123
+ L +K + SDV+SFGV+
Sbjct: 182 IFWYAPESLTESKFSVASDVWSFGVV 207
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.8 bits (81), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 27/143 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ H HLV L+G + + + LV M G L ++++ HK + L C+ A+
Sbjct: 71 MASMDHPHLVRLLGVCL-SPTIQLVTQLMPHGCLLEYVHE-HKDNIGSQLLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL----------GSRILPAK 110
G+ YL ++HRD+ + N+L+ K + RLL G + +P K
Sbjct: 129 GMMYLE---ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGK-MPIK 184
Query: 111 -----------LTEKSDVYSFGV 122
T +SDV+S+GV
Sbjct: 185 WMALECIHYRKFTHQSDVWSYGV 207
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 35.8 bits (81), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 188 MALESILHRIYTHQSDVWSYGV 209
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 188 MALESILHRIYTHQSDVWSYGV 209
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 187
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 188 MALESILHRIYTHQSDVWSYGV 209
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 35.4 bits (80), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 66/142 (46%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + + +LLG+
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKW 192
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 193 MALESILHRIYTHQSDVWSYGV 214
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 35.4 bits (80), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 17/110 (15%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARG---TLRDH---LYNNHKPPLQWMWRLKI 54
L L H +++ L+ + LV+D M ++D+ L +H M
Sbjct: 66 LQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLM----- 120
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGS 104
+GL YLH ++ I+HRD+K N+LLDEN V K + + GS
Sbjct: 121 ---TLQGLEYLH---QHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGS 164
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 35.4 bits (80), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY-----NNHKPP-LQWMWRLKI 54
+S H ++VS V E+ LV ++ G++ D + HK L I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL YLH +N IHRDVK+ NILL E+
Sbjct: 127 LREVLEGLEYLH---KNGQIHRDVKAGNILLGED 157
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
LS ++ G ++++ ++ ++ + + G+ D L PL I +
Sbjct: 79 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL---EPGPLDETQIATILREILK 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE 87
GL YLH+ + IHRD+K+ N+LL E
Sbjct: 136 GLDYLHSEKK---IHRDIKAANVLLSE 159
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 63/143 (44%), Gaps = 25/143 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L+H+ LV L V + + ++ + M G+L D L L L + A
Sbjct: 58 MKQLQHQRLVRLYAV-VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAE 116
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL---------GSRILPAK- 110
G+ ++ RN IHR++++ NIL+ + K + RL+ G++ P K
Sbjct: 117 GMAFIEE--RN-YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAK-FPIKW 172
Query: 111 ----------LTEKSDVYSFGVL 123
T KSDV+SFG+L
Sbjct: 173 TAPEAINYGTFTIKSDVWSFGIL 195
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 35.0 bits (79), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 43/94 (45%), Gaps = 9/94 (9%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY-----NNHKPP-LQWMWRLKI 54
+S H ++VS V E+ LV ++ G++ D + HK L I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL YLH +N IHRDVK+ NILL E+
Sbjct: 122 LREVLEGLEYLH---KNGQIHRDVKAGNILLGED 152
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 35.0 bits (79), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
LS ++ G ++++ ++ ++ + + G+ D L PL I +
Sbjct: 74 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE 87
GL YLH+ + IHRD+K+ N+LL E
Sbjct: 131 GLDYLHSEKK---IHRDIKAANVLLSE 154
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 37/148 (25%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ +L H H+V L+G + LV + G+L DH+ H+ L L + A+
Sbjct: 69 IGSLDHAHIVRLLGL-CPGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAK 126
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLG-SRILP----------- 108
G++YL + ++HR++ + N+LL K + Q+ G + +LP
Sbjct: 127 GMYYLE---EHGMVHRNLAARNVLL------KSPSQVQVADFGVADLLPPDDKQLLYSEA 177
Query: 109 --------------AKLTEKSDVYSFGV 122
K T +SDV+S+GV
Sbjct: 178 KTPIKWMALESIHFGKYTHQSDVWSYGV 205
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 37/148 (25%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ +L H H+V L+G + LV + G+L DH+ H+ L L + A+
Sbjct: 87 IGSLDHAHIVRLLGL-CPGSSLQLVTQYLPLGSLLDHV-RQHRGALGPQLLLNWGVQIAK 144
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLG-SRILP----------- 108
G++YL + ++HR++ + N+LL K + Q+ G + +LP
Sbjct: 145 GMYYLE---EHGMVHRNLAARNVLL------KSPSQVQVADFGVADLLPPDDKQLLYSEA 195
Query: 109 --------------AKLTEKSDVYSFGV 122
K T +SDV+S+GV
Sbjct: 196 KTPIKWMALESIHFGKYTHQSDVWSYGV 223
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
LS ++ G ++++ ++ ++ + + G+ D L PL I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILK 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE 87
GL YLH+ + IHRD+K+ N+LL E
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSE 139
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 35.0 bits (79), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 LSNLRHRHLVSLI-GHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L++ H ++V L+ + EN IL+ C G D + + PL +C
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
L+YLH N IIHRD+K+ NIL
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILF 168
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
LS ++ G ++++ ++ ++ + + G+ D L PL I +
Sbjct: 59 LSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG---PLDETQIATILREILK 115
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE 87
GL YLH+ + IHRD+K+ N+LL E
Sbjct: 116 GLDYLHSEKK---IHRDIKAANVLLSE 139
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 LSNLRHRHLVSLI-GHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L++ H ++V L+ + EN IL+ C G D + + PL +C
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
L+YLH N IIHRD+K+ NIL
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILF 168
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 35.0 bits (79), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 LSNLRHRHLVSLI-GHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L++ H ++V L+ + EN IL+ C G D + + PL +C
Sbjct: 88 LASCDHPNIVKLLDAFYYENNLWILIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTL 145
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
L+YLH N IIHRD+K+ NIL
Sbjct: 146 DALNYLHD---NKIIHRDLKAGNILF 168
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 34.7 bits (78), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 1 LSNLRHRHLVSLIGH---HVENKE-MILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKI 54
L L+H ++V V+ K+ ++LV + GTL+ +L + K + W
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW---- 134
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILL 85
C +GL +LHT T IIHRD+K NI +
Sbjct: 135 CRQILKGLQFLHTRT-PPIIHRDLKCDNIFI 164
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 130 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 187 MALESILHRIYTHQSDVWSYGV 208
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 188 MALESILHRIYTHQSDVWSYGV 209
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 189 MALESILHRIYTHQSDVWSYGV 210
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
LRH H++ L E+I+V + A L D++ K Q R I +A +
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISA--VE 127
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
Y H R+ I+HRD+K N+LLDE
Sbjct: 128 YCH---RHKIVHRDLKPENLLLDE 148
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 1 LSNLRHRHLVSLI-GHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
L++ H ++V L+ + EN IL+ C G D + + PL +C
Sbjct: 61 LASCDHPNIVKLLDAFYYENNLWILIEFCA--GGAVDAVMLELERPLTESQIQVVCKQTL 118
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
L+YLH N IIHRD+K+ NIL
Sbjct: 119 DALNYLHD---NKIIHRDLKAGNILF 141
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA-RGL 62
L+H+++V +G EN + + + + G+L L + P + GL
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGL 135
Query: 63 HYLHTGTRNTIIHRDVKSTNILLD 86
YLH N I+HRD+K N+L++
Sbjct: 136 KYLHD---NQIVHRDIKGDNVLIN 156
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 34.7 bits (78), Expect = 0.019, Method: Composition-based stats.
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ +IHRD+K +N+L++EN
Sbjct: 170 RGLKYMHSAQ---VIHRDLKPSNLLVNEN 195
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 72 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAK 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 130 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 186
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 187 MALESILHRIYTHQSDVWSYGV 208
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
LRH H++ L E+I+V + A L D++ K Q R I +A +
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISA--VE 126
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
Y H R+ I+HRD+K N+LLDE
Sbjct: 127 YCH---RHKIVHRDLKPENLLLDE 147
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 34.7 bits (78), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 193 MALESILHRIYTHQSDVWSYGV 214
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 75 MASVDNPHVCRLLGICLTST-VQLIMQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 132
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 133 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 189
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 190 MALESILHRIYTHQSDVWSYGV 211
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 34.7 bits (78), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
LRH H++ L E+I+V + A L D++ K Q R I +A +
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISA--VE 117
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
Y H R+ I+HRD+K N+LLDE
Sbjct: 118 YCH---RHKIVHRDLKPENLLLDE 138
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGXLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 189 MALESILHRIYTHQSDVWSYGV 210
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA---- 59
L+H+++V +G EN + + + + G+L L + P + + IG
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGP----LKDNEQTIGFYTKQI 117
Query: 60 -RGLHYLHTGTRNTIIHRDVKSTNILLD 86
GL YLH N I+HRD+K N+L++
Sbjct: 118 LEGLKYLHD---NQIVHRDIKGDNVLIN 142
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 13/111 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPL----QWM-WRLKIC 55
L+N++H ++V EN + +V D G L + N K L Q + W ++IC
Sbjct: 77 LANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRI-NAQKGVLFQEDQILDWFVQIC 135
Query: 56 IGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRI 106
+ L ++H I+HRD+KS NI L ++ + R+L S +
Sbjct: 136 LA----LKHVHD---RKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV 179
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 73 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 130
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 131 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 187
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 188 MALESILHRIYTHQSDVWSYGV 209
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 65 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 123 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 179
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 180 MALESILHRIYTHQSDVWSYGV 201
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 81 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 138
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 139 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 195
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 196 MALESILHRIYTHQSDVWSYGV 217
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 189 MALESILHRIYTHQSDVWSYGV 210
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 34.7 bits (78), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 42/84 (50%), Gaps = 6/84 (7%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
LRH H++ L E+I+V + A L D++ K Q R I +A +
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIE-YAGNELFDYIVQRDKMSEQEARRFFQQIISA--VE 121
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
Y H R+ I+HRD+K N+LLDE
Sbjct: 122 YCH---RHKIVHRDLKPENLLLDE 142
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 96 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 153
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 154 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 210
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 211 MALESILHRIYTHQSDVWSYGV 232
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 193 MALESILHRIYTHQSDVWSYGV 214
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 74 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 132 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 188
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 189 MALESILHRIYTHQSDVWSYGV 210
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 77 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 134
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 135 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 191
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 192 MALESILHRIYTHQSDVWSYGV 213
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 78 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 135
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 136 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 192
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 193 MALESILHRIYTHQSDVWSYGV 214
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 34.3 bits (77), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 63/141 (44%), Gaps = 24/141 (17%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARG 61
S L H+++VS+I E+ LV + + TL +++ ++ PL + G
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYIESHG--PLSVDTAINFTNQILDG 123
Query: 62 LHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLR----LLGS--RIL 107
+ + H I+HRD+K NIL+D N +AK E L +LG+
Sbjct: 124 IKHAH---DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFS 180
Query: 108 PAK-----LTEKSDVYSFGVL 123
P + E +D+YS G++
Sbjct: 181 PEQAKGEATDECTDIYSIGIV 201
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 34.3 bits (77), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 71 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 129 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 185
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 186 MALESILHRIYTHQSDVWSYGV 207
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 34.3 bits (77), Expect = 0.023, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPL----QWMWRLKICI 56
L + R +VSL + + LV M G L+ H+Y+ + + +IC
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
G L LH R I++RD+K NILLD++
Sbjct: 298 G----LEDLH---RERIVYRDLKPENILLDDH 322
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 34.3 bits (77), Expect = 0.024, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPL----QWMWRLKICI 56
L + R +VSL + + LV M G L+ H+Y+ + + +IC
Sbjct: 238 LEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICC 297
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
G L LH R I++RD+K NILLD++
Sbjct: 298 G----LEDLH---RERIVYRDLKPENILLDDH 322
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 34.3 bits (77), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A+
Sbjct: 105 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAK 162
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 163 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 219
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 220 MALESILHRIYTHQSDVWSYGV 241
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 4 LRHRHLVSLIGHHVENK----EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
LRH +++ I + ++ ++ L+ G+L D+L L + L+I + A
Sbjct: 88 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 144
Query: 60 RGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
GL +LH T + I HRD+KS NIL+ +N
Sbjct: 145 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 178
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 33.9 bits (76), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 4/85 (4%)
Query: 8 HLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHT 67
H+V G + +N ++ +V + G++ D + +K L I +GL YLH
Sbjct: 85 HVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKT-LTEDEIATILQSTLKGLEYLHF 143
Query: 68 GTRNTIIHRDVKSTNILLDENWVAK 92
+ IHRD+K+ NILL+ AK
Sbjct: 144 MRK---IHRDIKAGNILLNTEGHAK 165
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 4 LRHRHLVSLIGHHVENK----EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
LRH +++ I + ++ ++ L+ G+L D+L L + L+I + A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 115
Query: 60 RGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
GL +LH T + I HRD+KS NIL+ +N
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 149
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 33.9 bits (76), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 12/94 (12%)
Query: 4 LRHRHLVSLIGHHVENK----EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAA 59
LRH +++ I + ++ ++ L+ G+L D+L L + L+I + A
Sbjct: 59 LRHENILGFIASDMTSRHSSTQLWLITHYHEMGSLYDYL---QLTTLDTVSCLRIVLSIA 115
Query: 60 RGLHYLH-----TGTRNTIIHRDVKSTNILLDEN 88
GL +LH T + I HRD+KS NIL+ +N
Sbjct: 116 SGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKN 149
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 33.9 bits (76), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 22/29 (75%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ +IHRD+K +N+L++EN
Sbjct: 169 RGLKYMHSAQ---VIHRDLKPSNLLVNEN 194
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 33.9 bits (76), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NIL+ K
Sbjct: 102 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANILISATNAVK 156
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 33.9 bits (76), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + + +C+ +
Sbjct: 202 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQ 258
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 259 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 315
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 316 PELISRLPYGPEVDIWSLGIMV 337
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 33.9 bits (76), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + Q +C+ +
Sbjct: 71 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQ 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 128 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 184
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 185 PELISRLPYGPEVDIWSLGIMV 206
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 33.9 bits (76), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + Q +C+ +
Sbjct: 82 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQ 138
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 139 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 195
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 196 PELISRLPYGPEVDIWSLGIMV 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + + +C+ +
Sbjct: 125 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTR---MNEEQIAAVCLAVLQ 181
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 182 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 238
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 239 PELISRLPYGPEVDIWSLGIMV 260
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + Q +C+ +
Sbjct: 80 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQ 136
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 137 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 193
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 194 PELISRLPYGPEVDIWSLGIMV 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 33.5 bits (75), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/142 (22%), Positives = 66/142 (46%), Gaps = 24/142 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ E+ +V + + G L D + + Q +C+ +
Sbjct: 75 MRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA---AVCLAVLQ 131
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL---------DENWVAKHSRE--RQLRLLGSR--IL 107
L LH +IHRD+KS +ILL D + A+ S+E R+ L+G+ +
Sbjct: 132 ALSVLHA---QGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMA 188
Query: 108 PAKLT-----EKSDVYSFGVLC 124
P ++ + D++S G++
Sbjct: 189 PELISRLPYGPEVDIWSLGIMV 210
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 31/147 (21%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP--------PLQWMWRLKICI 56
+H ++V+L+G ++++ + G L + L + PL+ L
Sbjct: 100 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 159
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER 97
A+G+ +L + IHRDV + N+LL D N++ K +
Sbjct: 160 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 216
Query: 98 QLRLLGSR-ILPAKLTEKSDVYSFGVL 123
++ + I T +SDV+S+G+L
Sbjct: 217 PVKWMAPESIFDCVYTVQSDVWSYGIL 243
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 33.5 bits (75), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
GL+Y+H RN I+HRD+K+ N+L+ + V K
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLK 165
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIG 57
L L H H++ G + LV + + G+LRD+L + Q + + +IC
Sbjct: 87 LRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQIC-- 144
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
G+ YLH IHRD+ + N+LLD + + K
Sbjct: 145 --EGMAYLHA---QHYIHRDLAARNVLLDNDRLVK 174
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 33.5 bits (75), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
++++ + H+ L+G + + + L+ M G L D++ HK + + L C+ A
Sbjct: 68 MASVDNPHVCRLLGICLTST-VQLITQLMPFGCLLDYV-REHKDNIGSQYLLNWCVQIAE 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR--------------- 105
G++YL ++HRD+ + N+L+ K + +LLG+
Sbjct: 126 GMNYLED---RRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKW 182
Query: 106 -----ILPAKLTEKSDVYSFGV 122
IL T +SDV+S+GV
Sbjct: 183 MALESILHRIYTHQSDVWSYGV 204
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
GL+Y+H RN I+HRD+K+ N+L+ + V K
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLK 165
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 33.5 bits (75), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
GL+Y+H RN I+HRD+K+ N+L+ + V K
Sbjct: 136 GLYYIH---RNKILHRDMKAANVLITRDGVLK 164
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 33.5 bits (75), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 23/32 (71%), Gaps = 3/32 (9%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
GL+Y+H RN I+HRD+K+ N+L+ + V K
Sbjct: 137 GLYYIH---RNKILHRDMKAANVLITRDGVLK 165
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 33.5 bits (75), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 32/147 (21%), Positives = 61/147 (41%), Gaps = 31/147 (21%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP--------PLQWMWRLKICI 56
+H ++V+L+G ++++ + G L + L + PL+ L
Sbjct: 108 QHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSS 167
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER 97
A+G+ +L + IHRDV + N+LL D N++ K +
Sbjct: 168 QVAQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARL 224
Query: 98 QLRLLGSR-ILPAKLTEKSDVYSFGVL 123
++ + I T +SDV+S+G+L
Sbjct: 225 PVKWMAPESIFDCVYTVQSDVWSYGIL 251
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 33.5 bits (75), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGAARGL 62
+H H+V E+ M++ + G+L D + N++ + + + RGL
Sbjct: 69 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 128
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRE 96
Y+H+ +++H D+K +NI + + + E
Sbjct: 129 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASE 159
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGAARGL 62
+H H+V E+ M++ + G+L D + N++ + + + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRE 96
Y+H+ +++H D+K +NI + + + E
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASE 157
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 33/146 (22%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G + ++++ + M G L L N + + + G A
Sbjct: 71 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIAS 129
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-------------HSRERQLRLLGSRI- 106
G+ YL + +HRD+ + NIL++ N V K S + LG +I
Sbjct: 130 GMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIP 186
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SD +S+G++
Sbjct: 187 IRWTAPEAIAFRKFTSASDAWSYGIV 212
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 33.5 bits (75), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGAARGL 62
+H H+V E+ M++ + G+L D + N++ + + + RGL
Sbjct: 67 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 126
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRE 96
Y+H+ +++H D+K +NI + + + E
Sbjct: 127 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASE 157
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 33.1 bits (74), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 43/94 (45%), Gaps = 5/94 (5%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGAARGL 62
+H H+V E+ M++ + G+L D + N++ + + + RGL
Sbjct: 65 QHSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGL 124
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRE 96
Y+H+ +++H D+K +NI + + + E
Sbjct: 125 RYIHS---MSLVHMDIKPSNIFISRTSIPNAASE 155
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 33.1 bits (74), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NI++ K
Sbjct: 102 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 156
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 33.1 bits (74), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NI++ K
Sbjct: 102 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 156
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NI++ K
Sbjct: 102 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 156
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 33.1 bits (74), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 43/89 (48%), Gaps = 6/89 (6%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
LRH H++ L ++++V + A G L D++ + R I A +
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIE-YAGGELFDYIVEKKRMTEDEGRRFFQQIICA--IE 122
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENWVAK 92
Y H R+ I+HRD+K N+LLD+N K
Sbjct: 123 YCH---RHKIVHRDLKPENLLLDDNLNVK 148
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 33.1 bits (74), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NI++ K
Sbjct: 102 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 156
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 33.1 bits (74), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 47/95 (49%), Gaps = 10/95 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIG 57
L L H H++ G K + LV + + G+LRD+L + Q + + +IC G
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEG 129
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
A YLH+ IHR++ + N+LLD + + K
Sbjct: 130 MA----YLHS---QHYIHRNLAARNVLLDNDRLVK 157
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 32.7 bits (73), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 33 TLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
TLRD ++ P+ +++ A + L++ H +N IIHRDVK NI++ K
Sbjct: 119 TLRDIVHTEG--PMTPKRAIEVIADACQALNFSH---QNGIIHRDVKPANIMISATNAVK 173
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.7 bits (73), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
KI +GL YLHT R IIH D+K NILL N
Sbjct: 150 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVN 183
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 32.7 bits (73), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/146 (23%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H +++ L G + ++++ + M G L L N + + + G A
Sbjct: 69 MGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ-FTVIQLVGMLRGIAS 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL-------------LGSRI- 106
G+ YL + +HRD+ + NIL++ N V K S R LG +I
Sbjct: 128 GMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIP 184
Query: 107 ----LPA-----KLTEKSDVYSFGVL 123
P K T SD +S+G++
Sbjct: 185 IRWTAPEAIAFRKFTSASDAWSYGIV 210
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.3 bits (72), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 21/36 (58%), Gaps = 2/36 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
KI +GL YLHT R IIH D+K NILL N
Sbjct: 134 KIIQQVLQGLDYLHTKCR--IIHTDIKPENILLSVN 167
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 32.3 bits (72), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 46/95 (48%), Gaps = 10/95 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIG 57
L L H H++ G K + LV + + G+LRD+L + Q + + +IC G
Sbjct: 70 LRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLFAQQICEG 129
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
A YLH IHR++ + N+LLD + + K
Sbjct: 130 MA----YLHA---QHYIHRNLAARNVLLDNDRLVK 157
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 32.3 bits (72), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 62/148 (41%), Gaps = 31/148 (20%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK--PPLQWMWRLKICIGA 58
+ H +++ L G ++ ++++ + M G+L L N +Q + L+ G
Sbjct: 62 MGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLR---GI 118
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL-------------LGSR 105
A G+ YL +HR + + NIL++ N V K S R LG +
Sbjct: 119 AAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGK 175
Query: 106 I-----LPA-----KLTEKSDVYSFGVL 123
I P K T SDV+S+G++
Sbjct: 176 IPIRWTAPEAIQYRKFTSASDVWSYGIV 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 32.3 bits (72), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 32.3 bits (72), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 32.3 bits (72), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 32.0 bits (71), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH H++ L + +V + ++ G L D++ + + RL I +A
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA- 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
+ Y H R+ ++HRD+K N+LLD + AK
Sbjct: 124 -VDYCH---RHMVVHRDLKPENVLLDAHMNAK 151
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L RH H++ L + +V + ++ G L D++ + + RL I +A
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSA- 123
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
+ Y H R+ ++HRD+K N+LLD + AK
Sbjct: 124 -VDYCH---RHMVVHRDLKPENVLLDAHMNAK 151
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 60 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 117
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 118 YLHG---IGITHRDIKPENLLLDE 138
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 61/163 (37%), Gaps = 31/163 (19%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L L H +++ L + + LV + G L D + K + I
Sbjct: 75 LKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQK--FSEVDAAVIMKQVLS 132
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW-----------------VAKHSRER--QLRL 101
G YLH ++ I+HRD+K N+LL+ V +ER
Sbjct: 133 GTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 189
Query: 102 LGSRILPAKLTEKSDVYSFGV-----LCARPAMLPMAENEQEV 139
+ +L K EK DV+S GV LC P + +QE+
Sbjct: 190 IAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQEI 230
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 119
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 120 YLHG---IGITHRDIKPENLLLDE 140
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 32.0 bits (71), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P R + A G+
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMA--GVV 118
Query: 64 YLHTGTRNTIIHRDVKSTNILLDE 87
YLH I HRD+K N+LLDE
Sbjct: 119 YLHG---IGITHRDIKPENLLLDE 139
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 31.6 bits (70), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P A R H
Sbjct: 61 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP---------DAQRFFH 111
Query: 64 YLHTGTRN----TIIHRDVKSTNILLDE 87
L G I HRD+K N+LLDE
Sbjct: 112 QLMAGVVYLHGIGITHRDIKPENLLLDE 139
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 34/88 (38%), Gaps = 13/88 (14%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L H ++V GH E L + + G L D + + P A R H
Sbjct: 62 LNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRIEPDIGMPEP---------DAQRFFH 112
Query: 64 YLHTGTRN----TIIHRDVKSTNILLDE 87
L G I HRD+K N+LLDE
Sbjct: 113 QLMAGVVYLHGIGITHRDIKPENLLLDE 140
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 160 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 216
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 217 KWMAPETIFDRVYTIQSDVWSFGVL 241
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 31.6 bits (70), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 158 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 214
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVL 239
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 19/83 (22%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK- 110
RGL Y+H+ IIHRD+K +N+ ++E+ ++A+H+ + + +R A
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPE 192
Query: 111 -------LTEKSDVYSFGVLCAR 126
+ D++S G + A
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAE 215
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 31.6 bits (70), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 195 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 251
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 252 KWMAPETIFDRVYTIQSDVWSFGVL 276
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 149 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVL 230
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/152 (21%), Positives = 63/152 (41%), Gaps = 27/152 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKP----PLQWMWRLKICI 56
L L H +++ +E+ E+ +V + G L + + K P + +W+ + +
Sbjct: 86 LKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQL 145
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSR----------- 105
+A L ++H+ ++HRD+K N+ + V K R S+
Sbjct: 146 CSA--LEHMHS---RRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTP 200
Query: 106 --ILPAKLTE-----KSDVYSFGVLCARPAML 130
+ P ++ E KSD++S G L A L
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAAL 232
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 210 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 266
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 267 KWMAPETIFDRVYTIQSDVWSFGVL 291
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 31.6 bits (70), Expect = 0.17, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 32/87 (36%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL------------------- 101
G+ Y+H +N I+HRD+K N+LL+ S++ +R+
Sbjct: 162 GITYMH---KNKIVHRDLKPENLLLESK-----SKDANIRIIDFGLSTHFEASKKMKDKI 213
Query: 102 -----LGSRILPAKLTEKSDVYSFGVL 123
+ +L EK DV+S GV+
Sbjct: 214 GTAYYIAPEVLHGTYDEKCDVWSTGVI 240
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 31.6 bits (70), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLD 86
KI + + L +LH+ + ++IHRDVK +N+L++
Sbjct: 157 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLIN 188
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 31.6 bits (70), Expect = 0.17, Method: Composition-based stats.
Identities = 29/103 (28%), Positives = 42/103 (40%), Gaps = 29/103 (28%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW-----------------VAKHSRER--QLRL 101
G YLH ++ I+HRD+K N+LL+ V +ER
Sbjct: 116 GTTYLH---KHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYY 172
Query: 102 LGSRILPAKLTEKSDVYSFGV-----LCARPAMLPMAENEQEV 139
+ +L K EK DV+S GV LC P + +QE+
Sbjct: 173 IAPEVLRKKYDEKCDVWSCGVILYILLCGYPPF--GGQTDQEI 213
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 31.6 bits (70), Expect = 0.18, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 32/87 (36%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL------------------- 101
G+ Y+H +N I+HRD+K N+LL+ S++ +R+
Sbjct: 161 GITYMH---KNKIVHRDLKPENLLLESK-----SKDANIRIIDFGLSTHFEASKKMKDKI 212
Query: 102 -----LGSRILPAKLTEKSDVYSFGVL 123
+ +L EK DV+S GV+
Sbjct: 213 GTAYYIAPEVLHGTYDEKCDVWSTGVI 239
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 201 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 257
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 258 KWMAPETIFDRVYTIQSDVWSFGVL 282
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 149 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 205
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVL 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
RGL +LH N I+HRD+K NIL+ K
Sbjct: 123 RGLDFLHA---NCIVHRDLKPENILVTSGGTVK 152
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 203 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 259
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 260 KWMAPETIFDRVYTIQSDVWSFGVL 284
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
RGL +LH N I+HRD+K NIL+ K
Sbjct: 131 RGLDFLHA---NCIVHRDLKPENILVTSGGTVK 160
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 208 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 264
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 265 KWMAPETIFDRVYTIQSDVWSFGVL 289
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
RGL +LH N I+HRD+K NIL+ K
Sbjct: 123 RGLDFLHA---NCIVHRDLKPENILVTSGGTVK 152
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 31.2 bits (69), Expect = 0.19, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 32/87 (36%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL------------------- 101
G+ Y+H +N I+HRD+K N+LL+ S++ +R+
Sbjct: 138 GITYMH---KNKIVHRDLKPENLLLESK-----SKDANIRIIDFGLSTHFEASKKMKDKI 189
Query: 102 -----LGSRILPAKLTEKSDVYSFGVL 123
+ +L EK DV+S GV+
Sbjct: 190 GTAYYIAPEVLHGTYDEKCDVWSTGVI 216
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLD 86
KI + + L +LH+ + ++IHRDVK +N+L++
Sbjct: 113 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLIN 144
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
RGL +LH N I+HRD+K NIL+ K
Sbjct: 123 RGLDFLHA---NCIVHRDLKPENILVTSGGTVK 152
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 31.2 bits (69), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ + +H ++V + ++ +E+ ++ + + G L D + L +C +
Sbjct: 96 MRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR---LNEEQIATVCEAVLQ 152
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL 85
L YLH +IHRD+KS +ILL
Sbjct: 153 ALAYLHA---QGVIHRDIKSDSILL 174
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.2 bits (69), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 154 AKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPL 210
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVL 235
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIG 57
L L H H+V G K + LV + + G+LRD+L + Q + + +IC G
Sbjct: 64 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEG 123
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
A YLH IHR + + N+LLD + + K
Sbjct: 124 MA----YLHA---QHYIHRALAARNVLLDNDRLVK 151
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K + R+ RL
Sbjct: 154 AKGMEFLAS---RKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPL 210
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 211 KWMAPETIFDRVYTIQSDVWSFGVL 235
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIG 57
L L H H+V G K + LV + + G+LRD+L + Q + + +IC G
Sbjct: 65 LRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLFAQQICEG 124
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
A YLH IHR + + N+LLD + + K
Sbjct: 125 MA----YLHA---QHYIHRALAARNVLLDNDRLVK 152
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 31.2 bits (69), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 13/34 (38%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLD 86
KI + + L +LH+ + ++IHRDVK +N+L++
Sbjct: 140 KIAVSIVKALEHLHS--KLSVIHRDVKPSNVLIN 171
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 31.2 bits (69), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 56/128 (43%), Gaps = 11/128 (8%)
Query: 21 EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGT------RNTII 74
E +LV + G+L +L + W+ ++ RGL YLHT + I
Sbjct: 86 EYLLVMEYYPNGSLXKYLSLHTS---DWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAIS 142
Query: 75 HRDVKSTNILLDENWVAKHSR-ERQLRLLGSRILPAKLTEKSDVYSFGVL-CARPAMLPM 132
HRD+ S N+L+ + S +RL G+R++ + + + G + P +L
Sbjct: 143 HRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVLEG 202
Query: 133 AENEQEVE 140
A N ++ E
Sbjct: 203 AVNLRDXE 210
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Query: 53 KICIGAARGLHYLHTGTRNTIIHRDVKSTNILLD 86
KI + + L++L + IIHRD+K +NILLD
Sbjct: 129 KITLATVKALNHLKENLK--IIHRDIKPSNILLD 160
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 134 RGLKYIHSAG---IIHRDLKPSNVAVNED 159
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNED 167
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 30.8 bits (68), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 9/88 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNN--HKPPLQWMWRLKICIGA 58
L N++H LV L ++ V D + G L HL P + +I
Sbjct: 93 LKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI---- 148
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD 86
A L YLH+ I++RD+K NILLD
Sbjct: 149 ASALGYLHSLN---IVYRDLKPENILLD 173
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 30.8 bits (68), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAG---IIHRDLKPSNVAVNED 167
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 30.8 bits (68), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 30.8 bits (68), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 46/102 (45%), Gaps = 10/102 (9%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L L H +++ L + LV + G L D + + + + +I
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKR--FSEVDAARIIRQVLS 143
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
G+ Y+H +N I+HRD+K N+LL+ S++ +R++
Sbjct: 144 GITYMH---KNKIVHRDLKPENLLLESK-----SKDANIRII 177
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 30.8 bits (68), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKFSLDLASLILYAYQLST 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 123 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWM 179
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 180 APESINFRRFTSASDVWMFGV 200
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 67 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 122
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 150
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 67 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 122
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 123 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 150
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 30.8 bits (68), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 93 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKYSLDLASLILYAYQLST 150
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 151 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 207
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 208 APESINFRRFTSASDVWMFGV 228
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 30.8 bits (68), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 12/70 (17%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTEKSDVYSF 120
++YLH R I+HRD+K N+L +S++ + +++ S +K+ K DV S
Sbjct: 132 AVYYLH---RMGIVHRDLKPENLLY-------YSQDEESKIMISDFGLSKMEGKGDVMS- 180
Query: 121 GVLCARPAML 130
C P +
Sbjct: 181 -TACGTPGYV 189
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 30.4 bits (67), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRDV + N+LL D N++ K + +
Sbjct: 168 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 224
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+L
Sbjct: 225 KWMAPESIFDCVYTVQSDVWSYGIL 249
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 62 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKYSLDLASLILYAYQLST 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 120 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 176
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 177 APESINFRRFTSASDVWMFGV 197
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 67 MRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFL-QVRKYSLDLASLILYAYQLST 124
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 125 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 181
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 182 APESINFRRFTSASDVWMFGV 202
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKYSLDLASLILYAYQLST 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 123 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 180 APESINFRRFTSASDVWMFGV 200
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 30.4 bits (67), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKYSLDLASLILYAYQLST 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 123 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 180 APESINFRRFTSASDVWMFGV 200
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHSL---QIAHFDLKPENIMLLDRN 151
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 158 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVL 239
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.4 bits (67), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 158 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPL 214
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVL 239
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK- 110
RGL Y+H+ IIHRD+K +N+ ++E+ +A+H+ + + +R A
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 111 -------LTEKSDVYSFGVLCAR 126
+ D++S G + A
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAE 215
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 70 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKYSLDLASLILYAYQLST 127
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 128 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 184
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 185 APESINFRRFTSASDVWMFGV 205
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 30.4 bits (67), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 68 MRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFL-QVRKYSLDLASLILYAYQLST 125
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 126 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 182
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 183 APESINFRRFTSASDVWMFGV 203
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 19/83 (22%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK- 110
RGL Y+H+ IIHRD+K +N+ ++E+ +A+H+ + + +R A
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 192
Query: 111 -------LTEKSDVYSFGVLCAR 126
+ D++S G + A
Sbjct: 193 IMLNWMHYNQTVDIWSVGCIMAE 215
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFL-QVRKFSLDLASLILYAYQLST 502
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L+ N ++++ + LP K
Sbjct: 503 ALAYLES---KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 560 APESINFRRFTSASDVWMFGV 580
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 30.4 bits (67), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 35/166 (21%), Positives = 64/166 (38%), Gaps = 47/166 (28%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWR--------- 51
L + H H++ L G ++ ++L+ + G+LR L + K ++
Sbjct: 80 LKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSL 139
Query: 52 -------------LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK------ 92
+ ++G+ YL +++HRD+ + NIL+ E K
Sbjct: 140 DHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFGL 196
Query: 93 ----HSRERQLRLLGSRILPAK-----------LTEKSDVYSFGVL 123
+ + ++ RI P K T +SDV+SFGVL
Sbjct: 197 SRDVYEEDSXVKRSQGRI-PVKWMAIESLFDHIYTTQSDVWSFGVL 241
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 30.4 bits (67), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 19/82 (23%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSRILPAK- 110
RGL Y+H+ IIHRD+K +N+ ++E+ +A+H+ + + +R A
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPE 188
Query: 111 -------LTEKSDVYSFGVLCA 125
+ D++S G + A
Sbjct: 189 IMLNWMHYNQTVDIWSVGCIMA 210
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRDV + N+LL D N++ K + +
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+L
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGIL 255
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 158 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVL 239
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 149 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVL 230
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 30.4 bits (67), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRDV + N+LL D N++ K + +
Sbjct: 174 AQGMAFLAS---KNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPV 230
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+L
Sbjct: 231 KWMAPESIFDCVYTVQSDVWSYGIL 255
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 149 AKGMEFLAS---RKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 205
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 206 KWMAPETIFDRVYTIQSDVWSFGVL 230
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 30.4 bits (67), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+G+ YLH IIHRD+K +N+L+ E+
Sbjct: 148 KGIEYLH---YQKIIHRDIKPSNLLVGED 173
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 165 RGLKYIHSAD---IIHRDLKPSNLAVNED 190
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 10/91 (10%)
Query: 1 LSNLRHRHLVSLIGHHV-ENK-EMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGA 58
L ++H ++++L H V ENK ++IL+ + +A G L D L K L +
Sbjct: 68 LKEIQHPNVITL--HEVYENKTDVILIGELVAGGELFDFL--AEKESLTEEEATEFLKQI 123
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNI-LLDEN 88
G++YLH+ I H D+K NI LLD N
Sbjct: 124 LNGVYYLHS---LQIAHFDLKPENIMLLDRN 151
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 30.0 bits (66), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 42/81 (51%), Gaps = 10/81 (12%)
Query: 9 LVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQW--MWRLKICIGAARGLHYLH 66
+V L ++K + +V + M G L +L +N+ P +W + ++ + A +H +
Sbjct: 137 VVQLFCAFQDDKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVL-ALDAIHSM- 193
Query: 67 TGTRNTIIHRDVKSTNILLDE 87
+IHRDVK N+LLD+
Sbjct: 194 -----GLIHRDVKPDNMLLDK 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 38/85 (44%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK---------------HSRERQLRLLG 103
A+G+ +L + IHRD+ + NILL E V K R+ RL
Sbjct: 158 AKGMEFLAS---RKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPL 214
Query: 104 SRILPAKL-----TEKSDVYSFGVL 123
+ P + T +SDV+SFGVL
Sbjct: 215 KWMAPETIFDRVYTIQSDVWSFGVL 239
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L + H+V G ++ + +V + C R L H +P ++ R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
+G+ YLH N +IHRD+K N+ L+++ K ER+ L G+ I
Sbjct: 153 QGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPNYI 209
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L +K D++S G +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCI 231
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 30.0 bits (66), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L + H+V G ++ + +V + C R L H +P ++ R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
+G+ YLH N +IHRD+K N+ L+++ K ER+ L G+ I
Sbjct: 153 QGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPNYI 209
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L +K D++S G +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCI 231
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 30.0 bits (66), Expect = 0.44, Method: Composition-based stats.
Identities = 22/87 (25%), Positives = 36/87 (41%), Gaps = 32/87 (36%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRL------------------- 101
G+ Y H +N I+HRD+K N+LL+ S++ +R+
Sbjct: 138 GITYXH---KNKIVHRDLKPENLLLESK-----SKDANIRIIDFGLSTHFEASKKXKDKI 189
Query: 102 -----LGSRILPAKLTEKSDVYSFGVL 123
+ +L EK DV+S GV+
Sbjct: 190 GTAYYIAPEVLHGTYDEKCDVWSTGVI 216
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 145 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 201
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 202 VSPELLTEKSACKSSDLWALGCI 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNED 168
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 30.0 bits (66), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNED 168
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNED 184
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 146 RGLKYIHSAD---IIHRDLKPSNLAVNED 171
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNED 163
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 30.0 bits (66), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNED 168
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNED 166
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 135 RGLKYIHSAD---IIHRDLKPSNLAVNED 160
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNED 163
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNED 173
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNED 172
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNED 173
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 147 RGLKYIHSAD---IIHRDLKPSNLAVNED 172
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 143 RGLKYIHSAD---IIHRDLKPSNLAVNED 168
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 148 RGLKYIHSAD---IIHRDLKPSNLAVNED 173
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNED 166
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNED 181
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNED 163
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 30.0 bits (66), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNED 166
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 200
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 201 VSPELLTEKSASKSSDLWALGCI 223
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 30.0 bits (66), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 159 RGLKYIHSAD---IIHRDLKPSNLAVNED 184
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNED 167
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 138 RGLKYIHSAD---IIHRDLKPSNLAVNED 163
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNED 167
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 141 RGLKYIHSAD---IIHRDLKPSNLAVNED 166
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNED 181
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 149 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 205
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 206 VSPELLTEKSACKSSDLWALGCI 228
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 156 RGLKYIHSAD---IIHRDLKPSNLAVNED 181
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L + H+V G ++ + +V + C R L H +P ++ R I
Sbjct: 82 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 136
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
+G+ YLH N +IHRD+K N+ L+++ K ER+ L G+ I
Sbjct: 137 QGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 193
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L +K D++S G +
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCI 215
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR---GL 62
H L + + + V + + G L H+ + HK L + AA GL
Sbjct: 78 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGL 132
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
+LH+ I++RD+K NILLD++
Sbjct: 133 QFLHS---KGIVYRDLKLDNILLDKD 155
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNED 180
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 136 RGLKYIHSAD---IIHRDLKPSNLAVNED 161
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 30.0 bits (66), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 29/142 (20%)
Query: 3 NLRHRHLVSLIGHHVENKEMILVYD-CMARGTLRDHLYNNH--KPPLQWMWRLKICIGAA 59
+L + H+V G ++ + +V + C R L H +P ++ R I
Sbjct: 98 SLDNPHVVGFHGFFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTI----- 152
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGSR--I 106
+G+ YLH N +IHRD+K N+ L+++ K ER+ L G+ I
Sbjct: 153 QGVQYLHN---NRVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPNYI 209
Query: 107 LPAKLTEKS-----DVYSFGVL 123
P L +K D++S G +
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCI 231
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 10/98 (10%)
Query: 1 LSNLRHRHLVSLIG--HHVENKEMILVYDCMARGT--LRDHLYNNHKPPLQWMWRLKICI 56
L LRH++++ L+ ++ E ++M +V + G + D + P Q I
Sbjct: 60 LRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFCQLI 119
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS 94
GL YLH+ I+H+D+K N+LL K S
Sbjct: 120 ---DGLEYLHS---QGIVHKDIKPGNLLLTTGGTLKIS 151
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 30.0 bits (66), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 155 RGLKYIHSAD---IIHRDLKPSNLAVNED 180
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNED 157
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNED 157
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNED 158
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 49/124 (39%), Gaps = 34/124 (27%)
Query: 24 LVYDCMARGTLRDHLYNN-----HKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDV 78
LV M G L DH+ N + L W C+ A+G+ YL ++HRD+
Sbjct: 95 LVTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSYLED---VRLVHRDL 145
Query: 79 KSTNILLDENWVAKHSRERQLRLLG--------------------SRILPAKLTEKSDVY 118
+ N+L+ K + RLL IL + T +SDV+
Sbjct: 146 AARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVW 205
Query: 119 SFGV 122
S+GV
Sbjct: 206 SYGV 209
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 134 RGLKYIHSAD---IIHRDLKPSNLAVNED 159
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 30.0 bits (66), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 132 RGLKYIHSAD---IIHRDLKPSNLAVNED 157
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 133 RGLKYIHSAD---IIHRDLKPSNLAVNED 158
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR---GL 62
H L + + + V + + G L H+ + HK L + AA GL
Sbjct: 77 HPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLS-----RATFYAAEIILGL 131
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
+LH+ I++RD+K NILLD++
Sbjct: 132 QFLHS---KGIVYRDLKLDNILLDKD 154
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNED 167
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 30.0 bits (66), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
RGL Y+H+ IIHRD+K +N+ ++E+
Sbjct: 142 RGLKYIHSAD---IIHRDLKPSNLAVNED 167
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 30.0 bits (66), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 201 VSPELLTEKSACKSSDLWALGCI 223
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL YLHT I+H DVK+ N+LL +
Sbjct: 175 ALEGLEYLHT---RRILHGDVKADNVLLSSD 202
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQY 197
Query: 106 ILPAKLTEKS 115
+ P LTEKS
Sbjct: 198 VSPELLTEKS 207
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 29.6 bits (65), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL YLHT I+H DVK+ N+LL +
Sbjct: 159 ALEGLEYLHT---RRILHGDVKADNVLLSSD 186
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL YLHT I+H DVK+ N+LL +
Sbjct: 173 ALEGLEYLHT---RRILHGDVKADNVLLSSD 200
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 147 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 203
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 204 VSPELLTEKSACKSSDLWALGCI 226
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 29.6 bits (65), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 145 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 201
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 202 VSPELLTEKSACKSSDLWALGCI 224
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQY 198
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 199 VSPELLTEKSACKSSDLWALGCI 221
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 201 VSPELLTEKSACKSSDLWALGCI 223
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 201 VSPELLTEKSACKSSDLWALGCI 223
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 29.6 bits (65), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 31/58 (53%), Gaps = 6/58 (10%)
Query: 32 GTLRDHLYN-NHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GTL D +++ N WRL I A L Y+H+ IIHRD+K NI +DE+
Sbjct: 100 GTLYDLIHSENLNQQRDEYWRLFRQILEA--LSYIHS---QGIIHRDLKPMNIFIDES 152
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 201 VSPELLTEKSACKSSDLWALGCI 223
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 29.6 bits (65), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 37/156 (23%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY--------------NNHKPPLQ 47
+ L+H ++V L+G +++ + +++ + G L + L K L+
Sbjct: 84 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 143
Query: 48 WMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS-----RE----RQ 98
+ + A G+ YL + + ++H+D+ + N+L+ + K S RE
Sbjct: 144 PPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 200
Query: 99 LRLLGSRILP-----------AKLTEKSDVYSFGVL 123
+LLG+ +LP K + SD++S+GV+
Sbjct: 201 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 236
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 29.6 bits (65), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 199 VSPELLTEKSACKSSDLWALGCI 221
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 199 VSPELLTEKSACKSSDLWALGCI 221
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 29.6 bits (65), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 144 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 200
Query: 106 ILPAKLTEKS 115
+ P LTEKS
Sbjct: 201 VSPELLTEKS 210
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 33/156 (21%), Positives = 69/156 (44%), Gaps = 37/156 (23%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY--------------NNHKPPLQ 47
+ L+H ++V L+G +++ + +++ + G L + L K L+
Sbjct: 67 ARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALE 126
Query: 48 WMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS-----RE----RQ 98
+ + A G+ YL + + ++H+D+ + N+L+ + K S RE
Sbjct: 127 PPDFVHLVAQIAAGMEYL---SSHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADY 183
Query: 99 LRLLGSRILP-----------AKLTEKSDVYSFGVL 123
+LLG+ +LP K + SD++S+GV+
Sbjct: 184 YKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 219
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 142 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 198
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 199 VSPELLTEKSACKSSDLWALGCI 221
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 122 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 178
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 179 VSPELLTEKSACKSSDLWALGCI 201
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 29.6 bits (65), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 120 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 176
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 177 VSPELLTEKSACKSSDLWALGCI 199
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 121 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 177
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 178 VSPELLTEKSACKSSDLWALGCI 200
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 29.6 bits (65), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 49/93 (52%), Gaps = 17/93 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL------YNNHKPPLQWMWRLKI 54
L +L+H ++V+L K + LV++ + + L+ +L N H L ++++L
Sbjct: 54 LKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD-LKQYLDDCGNIINMHNVKL-FLFQL-- 109
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILLDE 87
RGL Y H R ++HRD+K N+L++E
Sbjct: 110 ----LRGLAYCH---RQKVLHRDLKPQNLLINE 135
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 29.6 bits (65), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 29/70 (41%), Gaps = 18/70 (25%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 141 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 197
Query: 106 ILPAKLTEKS 115
+ P LTEKS
Sbjct: 198 VSPELLTEKS 207
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 29.6 bits (65), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 119 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 175
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 176 VSPELLTEKSACKSSDLWALGCI 198
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 29.6 bits (65), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 35/83 (42%), Gaps = 23/83 (27%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDENW---------------VAKHSRERQLRLLGSR 105
L YLH IIHRD+K NILL+E+ +K +R
Sbjct: 126 ALEYLHG---KGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQY 182
Query: 106 ILPAKLTEK-----SDVYSFGVL 123
+ P LTEK SD+++ G +
Sbjct: 183 VSPELLTEKSACKSSDLWALGCI 205
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 29.6 bits (65), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 18/25 (72%), Gaps = 3/25 (12%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL 85
G+HYLH N ++HRD+K NIL+
Sbjct: 140 GIHYLHA---NWVLHRDLKPANILV 161
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 29.3 bits (64), Expect = 0.73, Method: Composition-based stats.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLD 86
G+ Y+H ++ I+HRD+K NILL+
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLE 155
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)
Query: 31 RGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILL 85
+GTL + L + L++ +G+ Y+H+ +IHRD+K +NI L
Sbjct: 118 KGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFL 169
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 29.3 bits (64), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 50 WRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
WRL I A L Y+H+ IIHRD+K NI +DE+
Sbjct: 119 WRLFRQILEA--LSYIHS---QGIIHRDLKPMNIFIDES 152
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 29.3 bits (64), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 32/159 (20%), Positives = 63/159 (39%), Gaps = 44/159 (27%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHL-------------YNNHK--------P 44
H ++V+L+G + + L+++ G L ++L Y N K
Sbjct: 108 HENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLN 167
Query: 45 PLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILL------------------- 85
L + L A+G+ +L + +HRD+ + N+L+
Sbjct: 168 VLTFEDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMS 224
Query: 86 DENWVAKHSRERQLRLLG-SRILPAKLTEKSDVYSFGVL 123
D N+V + + ++ + + T KSDV+S+G+L
Sbjct: 225 DSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGIL 263
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRD+ + NILL D N+V K + +
Sbjct: 171 AKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 227
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+
Sbjct: 228 KWMAPESIFNCVYTFESDVWSYGIF 252
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 29.3 bits (64), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRD+ + NILL D N+V K + +
Sbjct: 178 AKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 234
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIF 259
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 29.3 bits (64), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRD+ + NILL D N+V K + +
Sbjct: 173 AKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 229
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+
Sbjct: 230 KWMAPESIFNCVYTFESDVWSYGIF 254
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRD+ + NILL D N+V K + +
Sbjct: 155 AKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPV 211
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+
Sbjct: 212 KWMAPESIFNCVYTFESDVWSYGIF 236
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 29.3 bits (64), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 52/112 (46%), Gaps = 13/112 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 75 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 132
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL---DENWVAKHSRERQLRLLGSRIL 107
+ YLH N IIHRD+K N+LL +E+ + K + ++LG L
Sbjct: 133 ---VQYLH---ENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL 178
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 69 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 127 ---VQYLH---ENGIIHRDLKPENVLL 147
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 9/86 (10%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR--- 60
L+H H+V L+ + + + +V++ M L + + +++ + R
Sbjct: 83 LKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVK--RADAGFVYSEAVASHYMRQIL 140
Query: 61 -GLHYLHTGTRNTIIHRDVKSTNILL 85
L Y H N IIHRDVK N+LL
Sbjct: 141 EALRYCHD---NNIIHRDVKPENVLL 163
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 23/85 (27%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRERQL 99
A+G+ +L + IHRD+ + NILL D N+V K + +
Sbjct: 178 AKGMAFLAS---KNCIHRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGNARLPV 234
Query: 100 RLLGSR-ILPAKLTEKSDVYSFGVL 123
+ + I T +SDV+S+G+
Sbjct: 235 KWMAPESIFNCVYTFESDVWSYGIF 259
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 29.3 bits (64), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 69 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 127 ---VQYLH---ENGIIHRDLKPENVLL 147
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 29.3 bits (64), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 65 MRQFDHPHIVKLIGVITENPVWIIMELC-TLGELRSFL-QVRKFSLDLASLILYAYQLST 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNIL--------LDENWVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L L + ++++ + LP K
Sbjct: 123 ALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 179
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 180 APESINFRRFTSASDVWMFGV 200
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 28.9 bits (63), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 21/42 (50%), Gaps = 4/42 (9%)
Query: 55 CI--GAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHS 94
CI Y+H I HRDVK +NIL+D+N K S
Sbjct: 155 CIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLS 194
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 28.9 bits (63), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 68 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 125
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 126 ---VQYLH---ENGIIHRDLKPENVLL 146
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 28.9 bits (63), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 69 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 126
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 127 ---VQYLH---ENGIIHRDLKPENVLL 147
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 28.9 bits (63), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 9 LVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQW--MWRLKICIGAARGLHYLH 66
+V L +++ + +V + M G L +L +N+ P +W + ++ + A +H +
Sbjct: 131 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVL-ALDAIHSMG 188
Query: 67 TGTRNTIIHRDVKSTNILLDEN 88
IHRDVK N+LLD++
Sbjct: 189 ------FIHRDVKPDNMLLDKS 204
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLN 158
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLN 158
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLN 160
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLN 158
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 28.9 bits (63), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 10/82 (12%)
Query: 9 LVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQW--MWRLKICIGAARGLHYLH 66
+V L +++ + +V + M G L +L +N+ P +W + ++ + A +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVL-ALDAIHSMG 193
Query: 67 TGTRNTIIHRDVKSTNILLDEN 88
IHRDVK N+LLD++
Sbjct: 194 ------FIHRDVKPDNMLLDKS 209
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLN 160
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 143 RGLKYIHSAN---VLHRDLKPSNLLLN 166
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLN 158
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 135 RGLKYIHSAN---VLHRDLKPSNLLLN 158
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 28.9 bits (63), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 137 RGLKYIHSAN---VLHRDLKPSNLLLN 160
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLN 156
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 8/81 (9%)
Query: 9 LVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM-WRLKICIGAARGLHYLHT 67
+V L +++ + +V + M G L +L +N+ P +W + + A +H +
Sbjct: 136 VVQLFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAIHSM-- 192
Query: 68 GTRNTIIHRDVKSTNILLDEN 88
IHRDVK N+LLD++
Sbjct: 193 ----GFIHRDVKPDNMLLDKS 209
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLN 178
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLN 163
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 140 RGLKYIHSAN---VLHRDLKPSNLLLN 163
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 141 RGLKYIHSAN---VLHRDLKPSNLLLN 164
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 132 RGLKYIHSAN---VLHRDLKPSNLLLN 155
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 139 RGLKYIHSAN---VLHRDLKPSNLLLN 162
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 28.9 bits (63), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 133 RGLKYIHSAN---VLHRDLKPSNLLLN 156
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 54/139 (38%), Gaps = 21/139 (15%)
Query: 2 SNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARG 61
++L H +++ L + + + + L+ + RG L L + I A
Sbjct: 78 AHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCT--FDEQRTATIMEELADA 135
Query: 62 LHYLHTGTRNTIIHRDVKSTN---------ILLDENWVAKHSRERQLRLLGS-RILPAKL 111
L Y H +IHRD+K N + D W R+ + G+ LP ++
Sbjct: 136 LMYCHG---KKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMCGTLDYLPPEM 192
Query: 112 ------TEKSDVYSFGVLC 124
EK D++ GVLC
Sbjct: 193 IEGRMHNEKVDLWCIGVLC 211
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/27 (44%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+LL+
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLLN 178
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH---KPPLQWMWRLKICIG 57
+ NL H H+V LIG +E + ++ + G L +L N K ++ L+IC
Sbjct: 67 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC-- 123
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ + YL + +HRD+ NIL+
Sbjct: 124 --KAMAYLES---INCVHRDIAVRNILV 146
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 82 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 138
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVL 219
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 28.9 bits (63), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 82 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 138
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 139 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 195
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 196 WYAPECINYYKFSSKSDVWSFGVL 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 35/73 (47%), Gaps = 3/73 (4%)
Query: 21 EMILVYDCMARGTLRDHLYN-NHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
E +L+ + + +G L + L + PL LKI R + ++H + IIHRD+K
Sbjct: 108 EFLLLTE-LCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHR-QKPPIIHRDLK 165
Query: 80 STNILLDENWVAK 92
N+LL K
Sbjct: 166 VENLLLSNQGTIK 178
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 28.9 bits (63), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 53/141 (37%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ H H+V LIG EN I++ C G LR L K L + +
Sbjct: 445 MRQFDHPHIVKLIGVITENPVWIIMELCTL-GELRSFL-QVRKFSLDLASLILYAYQLST 502
Query: 61 GLHYLHTGTRNTIIHRDVKSTNIL--------LDENWVAKHSRERQLRLLGSRILPAK-- 110
L YL + +HRD+ + N+L L + ++++ + LP K
Sbjct: 503 ALAYLES---KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWM 559
Query: 111 ---------LTEKSDVYSFGV 122
T SDV+ FGV
Sbjct: 560 APESINFRRFTSASDVWMFGV 580
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH---KPPLQWMWRLKICIG 57
+ NL H H+V LIG +E + ++ + G L +L N K ++ L+IC
Sbjct: 79 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC-- 135
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ + YL + +HRD+ NIL+
Sbjct: 136 --KAMAYLES---INCVHRDIAVRNILV 158
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 11/88 (12%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH---KPPLQWMWRLKICIG 57
+ NL H H+V LIG +E + ++ + G L +L N K ++ L+IC
Sbjct: 63 MKNLDHPHIVKLIG-IIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQIC-- 119
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ + YL + +HRD+ NIL+
Sbjct: 120 --KAMAYLES---INCVHRDIAVRNILV 142
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 28.5 bits (62), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%), Gaps = 4/39 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL--DENWVAKHSRE 96
+GL YLH+ + IIH D+K NIL+ D+ +V + + E
Sbjct: 151 QGLDYLHSKCK--IIHTDIKPENILMCVDDAYVRRMAAE 187
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 80 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 136
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 137 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 193
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 194 WYAPECINYYKFSSKSDVWSFGVL 217
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 99 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 141
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 142 CHS---QGIMHRDVKPHNVMID 160
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 100 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 142
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 143 CHS---QGIMHRDVKPHNVMID 161
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 72 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 128
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 129 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 185
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 186 WYAPECINYYKFSSKSDVWSFGVL 209
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 27/132 (20%)
Query: 22 MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKST 81
++++ +CM G L + +I + +LH+ + I HRDVK
Sbjct: 101 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 157
Query: 82 NIL-----------LDENWVAKHSRERQLR-------LLGSRIL-PAKLTEKSDVYSFGV 122
N+L L + AK + + L+ + +L P K + D++S GV
Sbjct: 158 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 217
Query: 123 -----LCARPAM 129
LC P
Sbjct: 218 IMYILLCGFPPF 229
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 28.5 bits (62), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL YLH+ I+H DVK+ N+LL +
Sbjct: 194 ALEGLEYLHS---RRILHGDVKADNVLLSSD 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 62 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 118
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENW--VAKHSRERQL 99
G+ YL + +HRD+ + N+LL DEN+ H +
Sbjct: 119 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 175
Query: 100 RLLGSRILPAKLTEKSDVYSFGVL 123
I K + KSDV+SFGVL
Sbjct: 176 WYAPECINYYKFSSKSDVWSFGVL 199
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 66 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 179
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVL 203
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 98 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 140
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 141 CHS---QGIMHRDVKPHNVMID 159
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 50/132 (37%), Gaps = 27/132 (20%)
Query: 22 MILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKST 81
++++ +CM G L + +I + +LH+ + I HRDVK
Sbjct: 82 LLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHS---HNIAHRDVKPE 138
Query: 82 NIL-----------LDENWVAKHSRERQLR-------LLGSRIL-PAKLTEKSDVYSFGV 122
N+L L + AK + + L+ + +L P K + D++S GV
Sbjct: 139 NLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGV 198
Query: 123 -----LCARPAM 129
LC P
Sbjct: 199 IMYILLCGFPPF 210
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL YLH+ I+H DVK+ N+LL +
Sbjct: 175 ALEGLEYLHS---RRILHGDVKADNVLLSSD 202
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 99 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 141
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 142 CHS---QGIMHRDVKPHNVMID 160
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 35/82 (42%), Gaps = 20/82 (24%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H SLI +V N + ++Y + +R ++Y + L Y
Sbjct: 119 QHSKTPSLIFEYVNNTDFKVLYPTLTDYDIRYYIYE-----------------LLKALDY 161
Query: 65 LHTGTRNTIIHRDVKSTNILLD 86
H+ I+HRDVK N+++D
Sbjct: 162 CHS---QGIMHRDVKPHNVMID 180
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 28.5 bits (62), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 60/144 (41%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 60 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 116
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENW--VAKHSRERQL 99
G+ YL + +HRD+ + N+LL DEN+ H +
Sbjct: 117 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 173
Query: 100 RLLGSRILPAKLTEKSDVYSFGVL 123
I K + KSDV+SFGVL
Sbjct: 174 WYAPECINYYKFSSKSDVWSFGVL 197
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 28.5 bits (62), Expect = 1.4, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 21/41 (51%), Gaps = 9/41 (21%)
Query: 48 WMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
++ + I I + LHY +HRD+K NIL+D N
Sbjct: 180 YLAEMVIAIDSVHQLHY---------VHRDIKPDNILMDMN 211
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 41/87 (47%), Gaps = 10/87 (11%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNH--KPPLQWMWRLKICIGA 58
L L H ++ I + + ++ +V + M G L D + N K ++ ++ +
Sbjct: 194 LKKLNHPCIIK-IKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA- 251
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 252 ---VQYLH---ENGIIHRDLKPENVLL 272
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 28.5 bits (62), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 20/27 (74%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
RGL Y+H+ ++HRD+K +N+L++
Sbjct: 155 RGLKYIHSAN---VLHRDLKPSNLLIN 178
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 28.5 bits (62), Expect = 1.5, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 3/25 (12%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL 85
+ YLH N IIHRD+K N+LL
Sbjct: 265 AVQYLH---ENGIIHRDLKPENVLL 286
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 424 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 480
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 481 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 537
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 538 WYAPECINYYKFSSKSDVWSFGVL 561
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 20/30 (66%), Gaps = 3/30 (10%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A GL +LH+ II+RD+K NILLDE
Sbjct: 140 ALGLDHLHS---LGIIYRDLKPENILLDEE 166
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 11/72 (15%)
Query: 21 EMILVYDCMARGTLRDHL-----YNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIH 75
E L+ RGTL + + N Q +W L +G RGL +H H
Sbjct: 104 EAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLL---LGICRGLEAIHA---KGYAH 157
Query: 76 RDVKSTNILLDE 87
RD+K TNILL +
Sbjct: 158 RDLKPTNILLGD 169
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 62/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 425 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 481
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DENWVAKHSRER-QLR 100
G+ YL + +HRD+ + N+LL DEN+ + + ++
Sbjct: 482 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVK 538
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 539 WYAPECINYYKFSSKSDVWSFGVL 562
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 28.1 bits (61), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL-YNNHKPPLQWMWRLKICIGAA 59
++ L H L++L + EM+L+ + ++ G L D + ++K + + A
Sbjct: 102 MNQLHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRIAAEDYK--MSEAEVINYMRQAC 159
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNIL 84
GL ++H ++I+H D+K NI+
Sbjct: 160 EGLKHMH---EHSIVHLDIKPENIM 181
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 40/81 (49%), Gaps = 5/81 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
+++++ LI ++ LV++ + G++ H+ + R+ + AA L +L
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAA--LDFL 127
Query: 66 HTGTRNTIIHRDVKSTNILLD 86
HT I HRD+K NIL +
Sbjct: 128 HT---KGIAHRDLKPENILCE 145
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 28.1 bits (61), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 3/38 (7%)
Query: 55 CIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAK 92
CI + L+YL + ++ H D+K NILLD+ + K
Sbjct: 143 CIEILKALNYLR---KMSLTHTDLKPENILLDDPYFEK 177
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 28.1 bits (61), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
G++YLH +N I+H D+K NILL
Sbjct: 142 EGVYYLH---QNNIVHLDLKPQNILL 164
>pdb|3HHS|A Chain A, Crystal Structure Of Manduca Sexta Prophenoloxidase
Length = 694
Score = 28.1 bits (61), Expect = 1.9, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 19 NKEMILVYDC--MARGTLRDHLYNNHKPPLQWMWRLKI-CIGAARGLHYLHTGTRNTIIH 75
++++I Y+C + R +++ + P+ + K+ + +ARG G R +
Sbjct: 244 HQQIIARYNCERLCNSLKRVKKFSDWREPIPEAYYPKLDSLTSARGWPPRQAGMRWQDLK 303
Query: 76 RDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTEKSDVYSFGVLCARPAMLP 131
R V N+ +D+ + + E + G+ ILP K T+K D+ G + + P
Sbjct: 304 RPVDGLNVTIDDMERYRRNIEEAIAT-GNVILPDKSTKKLDIDMLGNMMEASVLSP 358
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK----PPLQWMWRLKICI 56
L+ H ++V L+G + + ++ ++ + G + + + P +Q +C
Sbjct: 70 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCR 124
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILL 85
L++LH+ IIHRD+K+ N+L+
Sbjct: 125 QMLEALNFLHS---KRIIHRDLKAGNVLM 150
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 28.1 bits (61), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/89 (22%), Positives = 43/89 (48%), Gaps = 12/89 (13%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK----PPLQWMWRLKICI 56
L+ H ++V L+G + + ++ ++ + G + + + P +Q +C
Sbjct: 62 LATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQ-----VVCR 116
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILL 85
L++LH+ IIHRD+K+ N+L+
Sbjct: 117 QMLEALNFLHS---KRIIHRDLKAGNVLM 142
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPD 192
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 27.7 bits (60), Expect = 2.4, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 212 RSLAYIHS---FGICHRDIKPQNLLLDPD 237
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 169 RSLAYIHS---FGICHRDIKPQNLLLDPD 194
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 171 RSLAYIHS---FGICHRDIKPQNLLLDPD 196
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 27.7 bits (60), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 167 RSLAYIHS---FGICHRDIKPQNLLLDPD 192
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPD 158
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPD 158
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 27.7 bits (60), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+GL Y+H IIHRD+K N+ ++E+
Sbjct: 139 KGLRYIHAAG---IIHRDLKPGNLAVNED 164
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 27.3 bits (59), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ L YLH N IIHRD+K NI+L
Sbjct: 131 SSALRYLH---ENRIIHRDLKPENIVL 154
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 161 RSLAYIHS---FGICHRDIKPQNLLLDPD 186
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILL 85
+ L YLH N IIHRD+K NI+L
Sbjct: 132 SSALRYLH---ENRIIHRDLKPENIVL 155
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 17/88 (19%)
Query: 52 LKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVA-------KHSRERQLRLLGS 104
+K + ARG+ +LHT I + S ++++DE+ A K S + R+
Sbjct: 114 VKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAP 172
Query: 105 R-ILPAKLTEK--------SDVYSFGVL 123
+ P L +K +D++SF VL
Sbjct: 173 AWVAPEALQKKPEDTNRRSADMWSFAVL 200
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPD 158
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H LV L + V + + G L H+ K P + I A L+YL
Sbjct: 112 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 169
Query: 66 HTGTRNTIIHRDVKSTNILLD 86
H II+RD+K N+LLD
Sbjct: 170 H---ERGIIYRDLKLDNVLLD 187
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPD 170
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 27.3 bits (59), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 146 RSLAYIHSFG---ICHRDIKPQNLLLDPD 171
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H LV L + V + + G L H+ K P + I A L+YL
Sbjct: 80 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 137
Query: 66 HTGTRNTIIHRDVKSTNILLD 86
H II+RD+K N+LLD
Sbjct: 138 H---ERGIIYRDLKLDNVLLD 155
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 27.3 bits (59), Expect = 2.8, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL ++H +++RD+K NILLDE+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEH 328
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 145 RSLAYIHS---FGICHRDIKPQNLLLDPD 170
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 27.3 bits (59), Expect = 2.8, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL ++H +++RD+K NILLDE+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEH 328
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 137 RSLAYIHS---FGICHRDIKPQNLLLDPD 162
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPD 158
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 152 RSLAYIHSFG---ICHRDIKPQNLLLDPD 177
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H ++++L + + K + LV + M G L D + + + IG + + Y
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEY 136
Query: 65 LHTGTRNTIIHRDVKSTNIL-LDEN 88
LH+ ++HRD+K +NIL +DE+
Sbjct: 137 LHS---QGVVHRDLKPSNILYVDES 158
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHS---FGICHRDIKPQNLLLDPD 158
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 7/101 (6%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLH 63
L+H ++ L + ++ + LV + G + +L N KP + R G+
Sbjct: 68 LKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEAR-HFMHQIITGML 126
Query: 64 YLHTGTRNTIIHRDVKSTNILLDENW---VAKHSRERQLRL 101
YLH+ + I+HRD+ +N+LL N +A QL++
Sbjct: 127 YLHS---HGILHRDLTLSNLLLTRNMNIKIADFGLATQLKM 164
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 138 RSLAYIHS---FGICHRDIKPQNLLLDPD 163
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPD 158
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 141 RSLAYIHSFG---ICHRDIKPQNLLLDPD 166
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 133 RSLAYIHSFG---ICHRDIKPQNLLLDPD 158
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 27.3 bits (59), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
R L Y+H+ I HRD+K N+LLD +
Sbjct: 134 RSLAYIHS---FGICHRDIKPQNLLLDPD 159
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL ++H +++RD+K NILLDE+
Sbjct: 304 GLEHMHN---RFVVYRDLKPANILLDEH 328
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 63/144 (43%), Gaps = 27/144 (18%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
+ L + ++V +IG E + +LV + G L +L N + + +++ +
Sbjct: 66 MQQLDNPYIVRMIGI-CEAESWMLVMEMAELGPLNKYLQQNRHVKDKNI--IELVHQVSM 122
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILL-------------------DEN-WVAKHSRERQLR 100
G+ YL + +HRD+ + N+LL DEN + A+ + ++
Sbjct: 123 GMKYLE---ESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVK 179
Query: 101 LLGSRILP-AKLTEKSDVYSFGVL 123
+ K + KSDV+SFGVL
Sbjct: 180 WYAPECINYYKFSSKSDVWSFGVL 203
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GL ++H +++RD+K NILLDE+
Sbjct: 303 GLEHMHN---RFVVYRDLKPANILLDEH 327
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H ++++L + + K + LV + M G L D + + + IG + + Y
Sbjct: 79 QHPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIG--KTVEY 136
Query: 65 LHTGTRNTIIHRDVKSTNIL-LDEN 88
LH+ ++HRD+K +NIL +DE+
Sbjct: 137 LHS---QGVVHRDLKPSNILYVDES 158
>pdb|3QDK|A Chain A, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|B Chain B, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|C Chain C, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
pdb|3QDK|D Chain D, Structural Insight On Mechanism And Diverse Substrate
Selection Strategy Of Ribulokinase
Length = 572
Score = 27.3 bits (59), Expect = 2.9, Method: Composition-based stats.
Identities = 23/75 (30%), Positives = 33/75 (44%), Gaps = 6/75 (8%)
Query: 67 TGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAKLTEK----SDVYSFGV 122
T R+ +I + + +TNI L W +H + L S +PA + E DV GV
Sbjct: 35 TPYRHGVIDQYLPNTNIKLGHEWALQHPLDYVEVLTTS--VPAVMKESGVDADDVIGIGV 92
Query: 123 LCARPAMLPMAENEQ 137
MLP+ E Q
Sbjct: 93 DFTACTMLPVDEEGQ 107
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 27.3 bits (59), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 82 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 140
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+DE
Sbjct: 141 ---FEYLHS---LDLIYRDLKPENLLIDEQ 164
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 27.3 bits (59), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
RGL +LH+ + ++HRD+K NIL+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILV 153
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H LV L + V + + G L H+ K P + I A L+YL
Sbjct: 65 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 122
Query: 66 HTGTRNTIIHRDVKSTNILLD 86
H II+RD+K N+LLD
Sbjct: 123 H---ERGIIYRDLKLDNVLLD 140
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 27.3 bits (59), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 50 WRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
WRL I A L Y+H+ IIHR++K NI +DE+
Sbjct: 119 WRLFRQILEA--LSYIHS---QGIIHRNLKPXNIFIDES 152
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
RGL +LH+ + ++HRD+K NIL+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILV 153
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILL 85
RGL +LH+ + ++HRD+K NIL+
Sbjct: 131 RGLDFLHS---HRVVHRDLKPQNILV 153
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 27.3 bits (59), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 17/91 (18%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWM------WRLKICIG 57
L H ++V L K + LV + + G + D+L + WM + + +
Sbjct: 63 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHG-----WMKEKEARAKFRQIVS 117
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A + H + I+HRD+K+ N+LLD +
Sbjct: 118 AVQYCH------QKFIVHRDLKAENLLLDAD 142
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 49/92 (53%), Gaps = 13/92 (14%)
Query: 1 LSNLRHRHLVSLIGHHV--ENKEMILVYDCMARGTLR--DHLYNNHKPPLQWMWRLKICI 56
L L+H+++V L H V +K++ LV++ + + D + P + + ++
Sbjct: 55 LKELKHKNIVRL--HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL-- 110
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+GL + H+ RN ++HRD+K N+L++ N
Sbjct: 111 --LKGLGFCHS--RN-VLHRDLKPQNLLINRN 137
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 26.9 bits (58), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 37/88 (42%), Gaps = 23/88 (26%)
Query: 72 TIIHRDVKSTNILLDENWVAK-----------HSRERQLRLLGS--RILPAKL-----TE 113
T++HRD+K N+ LD K H + +G+ + P ++ E
Sbjct: 136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFVGTPYYMSPEQMNRMSYNE 195
Query: 114 KSDVYSFGV----LCA-RPAMLPMAENE 136
KSD++S G LCA P ++ E
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 13/107 (12%)
Query: 1 LSNLRHRHLVSLIGHHV--ENKEMILVYDCMARGTLR--DHLYNNHKPPLQWMWRLKICI 56
L L+H+++V L H V +K++ LV++ + + D + P + + ++
Sbjct: 55 LKELKHKNIVRL--HDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLFQL-- 110
Query: 57 GAARGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLG 103
+GL + H+ RN ++HRD+K N+L++ N K + R G
Sbjct: 111 --LKGLGFCHS--RN-VLHRDLKPQNLLINRNGELKLANFGLARAFG 152
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 5/81 (6%)
Query: 6 HRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYL 65
H LV L + V + + G L H+ K P + I A L+YL
Sbjct: 69 HPFLVGLHSCFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLA--LNYL 126
Query: 66 HTGTRNTIIHRDVKSTNILLD 86
H II+RD+K N+LLD
Sbjct: 127 H---ERGIIYRDLKLDNVLLD 144
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 26.9 bits (58), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLY-NNHKPPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 26.9 bits (58), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLD 86
G+ Y+H ++ I+HRD+K NILL+
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLE 155
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/28 (39%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLD 86
+G+ YLH I+H+D+KS N+ D
Sbjct: 140 VKGMGYLHA---KGILHKDLKSKNVFYD 164
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 26.9 bits (58), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 19/26 (73%), Gaps = 3/26 (11%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLD 86
G+ Y+H ++ I+HRD+K NILL+
Sbjct: 133 GITYMH---KHNIVHRDLKPENILLE 155
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+GL Y+H+ ++HRD+K N+ ++E+
Sbjct: 155 KGLKYIHSAG---VVHRDLKPGNLAVNED 180
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 57/141 (40%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGS--RILP 108
YLH+ +I+RD+K N+L+D+ AK + R L G+ + P
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 109 AKLTEKS-----DVYSFGVLC 124
A + K D ++ GVL
Sbjct: 208 AIILSKGYNKAVDWWALGVLI 228
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 26.9 bits (58), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 7/47 (14%)
Query: 40 NNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVKSTNILLD 86
K P + +I IG L +LH + II+RD+K N++LD
Sbjct: 115 GKFKEPQAVFYAAEISIG----LFFLH---KRGIIYRDLKLDNVMLD 154
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 5/87 (5%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAAR 60
L NLRH+H+ L ++ +V + G L D++ + + L +
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDR--LSEEETRVVFRQIVS 119
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDE 87
+ Y+H+ HRD+K N+L DE
Sbjct: 120 AVAYVHS---QGYAHRDLKPENLLFDE 143
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 26.9 bits (58), Expect = 4.1, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 6/31 (19%)
Query: 58 AARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
A +H LH +HRD+K N+LLD N
Sbjct: 203 AIDSIHQLH------YVHRDIKPDNVLLDVN 227
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 26.9 bits (58), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 20/29 (68%), Gaps = 3/29 (10%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
+GL Y+H+ ++HRD+K N+ ++E+
Sbjct: 137 KGLKYIHSAG---VVHRDLKPGNLAVNED 162
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 26.9 bits (58), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 73 IIHRDVKSTNILLDENWVAK 92
IIHRD+K NI++ E++ K
Sbjct: 151 IIHRDIKDENIVIAEDFTIK 170
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 26.6 bits (57), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 26.6 bits (57), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 26.6 bits (57), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 70 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYC 129
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
H + I+HRD+K+ N+LLD +
Sbjct: 130 H------QKFIVHRDLKAENLLLDAD 149
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 26.6 bits (57), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 34/145 (23%), Positives = 57/145 (39%), Gaps = 24/145 (16%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLCARPA 128
IL + D ++ GVL + A
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYQMA 232
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+L+D
Sbjct: 152 --IMHRDVKPHNVLID 165
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 26.6 bits (57), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLC 124
IL + D ++ GVL
Sbjct: 208 EIILSKGYNKAVDWWALGVLI 228
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 26.6 bits (57), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
LHYLH I HRD+K N L N
Sbjct: 180 ALHYLHN---QGICHRDIKPENFLFSTN 204
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 26.6 bits (57), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLC 124
IL + D ++ GVL
Sbjct: 208 EIILSKGYNKAVDWWALGVLI 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 26.6 bits (57), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/25 (48%), Positives = 19/25 (76%), Gaps = 3/25 (12%)
Query: 62 LHYLHTGTRNTIIHRDVKSTNILLD 86
+ YLH+G ++HRD+K +NILL+
Sbjct: 122 IKYLHSGG---LLHRDMKPSNILLN 143
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 26.6 bits (57), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 73 IIHRDVKSTNILLDEN 88
II+RD+K NILLDE
Sbjct: 147 IIYRDLKPENILLDEE 162
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 26.6 bits (57), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 116 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 174
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 175 ---FEYLHS---LDLIYRDLKPENLLIDQQ 198
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 26.6 bits (57), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%), Gaps = 3/27 (11%)
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLD 86
R L Y+H+ I HRD+K N+LLD
Sbjct: 152 RSLAYIHS---IGICHRDIKPQNLLLD 175
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 26.6 bits (57), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 96 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 154
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 155 ---FEYLHS---LDLIYRDLKPENLLIDQQ 178
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + LV + + G + D+L + + + + + + A +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSA---V 127
Query: 63 HYLHTGTRNTIIHRDVKSTNILLD 86
Y H + I+HRD+K+ N+LLD
Sbjct: 128 QYCH---QKYIVHRDLKAENLLLD 148
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 26.6 bits (57), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 9/90 (10%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN 88
YLH+ +I+RD+K N+L+D+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQ 177
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 55/141 (39%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + +A G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLC 124
IL + D ++ GVL
Sbjct: 208 EIILSKGYNKAVDWWALGVLI 228
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 73 IIHRDVKSTNILLDEN 88
II+RD+K NILLDE
Sbjct: 148 IIYRDLKPENILLDEE 163
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 26.2 bits (56), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 73 IIHRDVKSTNILLDEN 88
II+RD+K NILLDE
Sbjct: 147 IIYRDLKPENILLDEE 162
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 26.2 bits (56), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + M G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLC 124
IL + D ++ GVL
Sbjct: 208 EIILSKGYNKAVDWWALGVLI 228
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 26.2 bits (56), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 54/141 (38%), Gaps = 24/141 (17%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHL--YNNHKPPLQWMWRLKICIGA 58
L + LV L +N + +V + M G + HL P + +I +
Sbjct: 95 LQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT- 153
Query: 59 ARGLHYLHTGTRNTIIHRDVKSTNILLDEN--------WVAKHSRERQLRLLGSR----- 105
YLH+ +I+RD+K N+L+D+ AK + R L G+
Sbjct: 154 ---FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPEYLAP 207
Query: 106 --ILPAKLTEKSDVYSFGVLC 124
IL + D ++ GVL
Sbjct: 208 EIILSKGYNKAVDWWALGVLI 228
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 73 IIHRDVKSTNILLDEN 88
II+RD+K NILLD N
Sbjct: 180 IIYRDIKLENILLDSN 195
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 26.2 bits (56), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/85 (23%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 5 RHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHY 64
+H ++++L + + K + +V + M G L D + + + + Y
Sbjct: 74 QHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKF--FSEREASAVLFTITKTVEY 131
Query: 65 LHTGTRNTIIHRDVKSTNIL-LDEN 88
LH ++HRD+K +NIL +DE+
Sbjct: 132 LHA---QGVVHRDLKPSNILYVDES 153
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 152 --IMHRDVKPHNVMIDH-------EHRKLRLI 174
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 26.2 bits (56), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICI-GAA 59
L L H ++VSLI + + LV++ M + + + + +K LQ ++KI +
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK--VLDENKTGLQDS-QIKIYLYQLL 129
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLG 103
RG+ + H ++ I+HRD+K N+L++ + K + R G
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + L+ + + G + D+L + + + + + + A +
Sbjct: 68 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA---V 124
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
Y H + I+HRD+K+ N+LLD +
Sbjct: 125 QYCH---QKRIVHRDLKAENLLLDAD 147
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 7/104 (6%)
Query: 1 LSNLRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICI-GAA 59
L L H ++VSLI + + LV++ M + + + + +K LQ ++KI +
Sbjct: 73 LKELHHPNIVSLIDVIHSERCLTLVFEFMEKDLKK--VLDENKTGLQDS-QIKIYLYQLL 129
Query: 60 RGLHYLHTGTRNTIIHRDVKSTNILLDENWVAKHSRERQLRLLG 103
RG+ + H ++ I+HRD+K N+L++ + K + R G
Sbjct: 130 RGVAHCH---QHRILHRDLKPQNLLINSDGALKLADFGLARAFG 170
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 26.2 bits (56), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 138 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 194
Query: 80 STNIL 84
N+L
Sbjct: 195 PENLL 199
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 26.2 bits (56), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 152 --IMHRDVKPHNVMID 165
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 132 KCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHS---INIAHRDVK 188
Query: 80 STNIL 84
N+L
Sbjct: 189 PENLL 193
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 26.2 bits (56), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 80 STNIL 84
N+L
Sbjct: 145 PENLL 149
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 132 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 188
Query: 80 STNIL 84
N+L
Sbjct: 189 PENLL 193
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 25.8 bits (55), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 4 LRHRHLVSLIGHHVENKEMILVYDCMARGTLRDHLYNNHK-PPLQWMWRLKICIGAARGL 62
L H ++V L K + L+ + + G + D+L + + + + + + A +
Sbjct: 71 LNHPNIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA---V 127
Query: 63 HYLHTGTRNTIIHRDVKSTNILLDEN 88
Y H + I+HRD+K+ N+LLD +
Sbjct: 128 QYCH---QKRIVHRDLKAENLLLDAD 150
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 23/88 (26%)
Query: 72 TIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAK------------------LTE 113
T++HRD+K N+ LD K R+L AK E
Sbjct: 136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFVGTPYYMSPEQMNRMSYNE 195
Query: 114 KSDVYSFGV----LCA-RPAMLPMAENE 136
KSD++S G LCA P ++ E
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 25.8 bits (55), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 33/88 (37%), Gaps = 23/88 (26%)
Query: 72 TIIHRDVKSTNILLDENWVAKHSRERQLRLLGSRILPAK------------------LTE 113
T++HRD+K N+ LD K R+L AK E
Sbjct: 136 TVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFVGTPYYMSPEQMNRMSYNE 195
Query: 114 KSDVYSFGV----LCA-RPAMLPMAENE 136
KSD++S G LCA P ++ E
Sbjct: 196 KSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GLH LH ++HRD+ NILL +N
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADN 170
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 80 STNIL 84
N+L
Sbjct: 145 PENLL 149
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 25.8 bits (55), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 150
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 151 --IMHRDVKPHNVMIDH-------EHRKLRLI 173
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 25.8 bits (55), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 152 --IMHRDVKPHNVMIDH-------EHRKLRLI 174
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 3/28 (10%)
Query: 61 GLHYLHTGTRNTIIHRDVKSTNILLDEN 88
GLH LH ++HRD+ NILL +N
Sbjct: 146 GLHVLHEAG---VVHRDLHPGNILLADN 170
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 152 --IMHRDVKPHNVMIDH-------EHRKLRLI 174
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 80 STNIL 84
N+L
Sbjct: 143 PENLL 147
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 25.8 bits (55), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 115 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHS--- 154
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 155 MGIMHRDVKPHNVMIDH-------EHRKLRLI 179
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 152 --IMHRDVKPHNVMID 165
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 25.8 bits (55), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 152 --IMHRDVKPHNVMIDH-------EHRKLRLI 174
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 38/92 (41%), Gaps = 27/92 (29%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 108 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 149
Query: 71 NTIIHRDVKSTNILLDENWVAKHSRERQLRLL 102
I+HRDVK N+++D R+LRL+
Sbjct: 150 --IMHRDVKPHNVMIDH-------EHRKLRLI 172
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 152 --IMHRDVKPHNVMID 165
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 152 --IMHRDVKPHNVMID 165
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 102 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 158
Query: 80 STNIL 84
N+L
Sbjct: 159 PENLL 163
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 25.8 bits (55), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 110 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 151
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 152 --IMHRDVKPHNVMID 165
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 94 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 150
Query: 80 STNIL 84
N+L
Sbjct: 151 PENLL 155
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 20/76 (26%)
Query: 11 SLIGHHVENKEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTR 70
+L+ HV N + +Y + +R ++Y + L Y H+
Sbjct: 109 ALVFEHVNNTDFKQLYQTLTDYDIRFYMYE-----------------ILKALDYCHSMG- 150
Query: 71 NTIIHRDVKSTNILLD 86
I+HRDVK N+++D
Sbjct: 151 --IMHRDVKPHNVMID 164
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 25.8 bits (55), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 87 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 143
Query: 80 STNIL 84
N+L
Sbjct: 144 PENLL 148
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 25.8 bits (55), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 92 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 148
Query: 80 STNIL 84
N+L
Sbjct: 149 PENLL 153
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 25.8 bits (55), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 88 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 144
Query: 80 STNIL 84
N+L
Sbjct: 145 PENLL 149
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 25.8 bits (55), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 86 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 142
Query: 80 STNIL 84
N+L
Sbjct: 143 PENLL 147
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 25.8 bits (55), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 28/65 (43%), Gaps = 3/65 (4%)
Query: 20 KEMILVYDCMARGTLRDHLYNNHKPPLQWMWRLKICIGAARGLHYLHTGTRNTIIHRDVK 79
K +++V +C+ G L + + +I + YLH+ I HRDVK
Sbjct: 93 KCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHS---INIAHRDVK 149
Query: 80 STNIL 84
N+L
Sbjct: 150 PENLL 154
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.137 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,436,323
Number of Sequences: 62578
Number of extensions: 164643
Number of successful extensions: 1718
Number of sequences better than 100.0: 872
Number of HSP's better than 100.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 637
Number of HSP's that attempted gapping in prelim test: 1080
Number of HSP's gapped (non-prelim): 891
length of query: 143
length of database: 14,973,337
effective HSP length: 89
effective length of query: 54
effective length of database: 9,403,895
effective search space: 507810330
effective search space used: 507810330
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 46 (22.3 bits)